Query 021213
Match_columns 316
No_of_seqs 231 out of 2140
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 14:23:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021213.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021213hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3obb_A Probable 3-hydroxyisobu 100.0 6.7E-57 2.3E-61 395.5 33.2 293 6-311 4-296 (300)
2 4gbj_A 6-phosphogluconate dehy 100.0 4.2E-53 1.4E-57 371.6 21.4 287 3-311 3-291 (297)
3 3doj_A AT3G25530, dehydrogenas 100.0 1.9E-47 6.3E-52 338.8 29.3 288 5-312 21-308 (310)
4 2h78_A Hibadh, 3-hydroxyisobut 100.0 2.5E-46 8.6E-51 330.8 33.2 295 5-312 3-297 (302)
5 3g0o_A 3-hydroxyisobutyrate de 100.0 4.4E-47 1.5E-51 335.6 26.2 289 4-312 6-296 (303)
6 3pdu_A 3-hydroxyisobutyrate de 100.0 4.8E-47 1.6E-51 332.9 26.0 285 6-310 2-286 (287)
7 4dll_A 2-hydroxy-3-oxopropiona 100.0 1E-46 3.6E-51 335.3 27.3 287 5-313 31-317 (320)
8 3pef_A 6-phosphogluconate dehy 100.0 1.4E-46 4.7E-51 330.1 25.4 286 5-310 1-286 (287)
9 3qha_A Putative oxidoreductase 100.0 4.7E-44 1.6E-48 315.0 28.3 270 4-300 14-294 (296)
10 3l6d_A Putative oxidoreductase 100.0 1.7E-44 5.8E-49 319.1 19.8 283 5-313 9-297 (306)
11 2gf2_A Hibadh, 3-hydroxyisobut 100.0 1.4E-42 4.9E-47 305.9 30.8 294 6-312 1-294 (296)
12 1vpd_A Tartronate semialdehyde 100.0 3E-41 1E-45 297.9 26.4 285 4-311 4-291 (299)
13 3cky_A 2-hydroxymethyl glutara 100.0 3.8E-40 1.3E-44 291.1 28.9 288 4-311 3-291 (301)
14 4ezb_A Uncharacterized conserv 100.0 2.7E-41 9.3E-46 299.7 19.3 276 4-314 23-314 (317)
15 2uyy_A N-PAC protein; long-cha 100.0 4.3E-40 1.5E-44 292.7 26.3 286 5-310 30-315 (316)
16 1yb4_A Tartronic semialdehyde 100.0 7.1E-40 2.4E-44 288.5 25.6 282 6-311 4-288 (295)
17 3qsg_A NAD-binding phosphogluc 100.0 1.1E-39 3.7E-44 289.0 18.1 265 5-299 24-292 (312)
18 2cvz_A Dehydrogenase, 3-hydrox 100.0 3.9E-39 1.3E-43 283.0 21.4 280 6-311 2-282 (289)
19 4e21_A 6-phosphogluconate dehy 100.0 4.4E-36 1.5E-40 269.2 29.6 285 2-314 19-355 (358)
20 4gwg_A 6-phosphogluconate dehy 100.0 4.8E-36 1.6E-40 277.3 20.6 265 4-292 3-293 (484)
21 2p4q_A 6-phosphogluconate dehy 100.0 3.4E-35 1.2E-39 274.0 20.8 259 4-286 9-291 (497)
22 4a7p_A UDP-glucose dehydrogena 100.0 5.8E-34 2E-38 261.6 23.8 262 6-294 9-306 (446)
23 2zyd_A 6-phosphogluconate dehy 100.0 2.4E-34 8.2E-39 267.6 19.8 259 3-285 13-295 (480)
24 3gg2_A Sugar dehydrogenase, UD 100.0 9.2E-33 3.1E-37 255.0 28.7 265 5-293 2-301 (450)
25 3g79_A NDP-N-acetyl-D-galactos 100.0 4.4E-33 1.5E-37 257.2 21.6 267 5-294 18-334 (478)
26 2pgd_A 6-phosphogluconate dehy 100.0 8.9E-33 3E-37 257.9 20.6 264 5-292 2-291 (482)
27 1i36_A Conserved hypothetical 100.0 4.4E-33 1.5E-37 241.3 17.1 256 6-302 1-259 (264)
28 2iz1_A 6-phosphogluconate dehy 100.0 1.7E-32 5.7E-37 255.6 21.3 257 5-285 5-287 (474)
29 3pid_A UDP-glucose 6-dehydroge 100.0 3.8E-31 1.3E-35 240.8 26.9 252 5-293 36-320 (432)
30 1pgj_A 6PGDH, 6-PGDH, 6-phosph 100.0 6.6E-32 2.2E-36 251.5 20.5 256 6-285 2-285 (478)
31 2o3j_A UDP-glucose 6-dehydroge 100.0 1.3E-30 4.4E-35 243.1 22.9 261 5-292 9-317 (481)
32 2y0c_A BCEC, UDP-glucose dehyd 100.0 1.6E-30 5.4E-35 241.8 23.2 263 5-293 8-311 (478)
33 2q3e_A UDP-glucose 6-dehydroge 100.0 5.5E-31 1.9E-35 245.2 19.6 251 5-286 5-305 (467)
34 3ojo_A CAP5O; rossmann fold, c 100.0 6.8E-31 2.3E-35 239.6 19.8 257 6-292 12-298 (431)
35 3k96_A Glycerol-3-phosphate de 100.0 2.8E-31 9.7E-36 238.2 10.5 291 1-312 25-351 (356)
36 1mv8_A GMD, GDP-mannose 6-dehy 100.0 1.6E-29 5.5E-34 233.6 21.2 265 6-293 1-301 (436)
37 1dlj_A UDP-glucose dehydrogena 100.0 5.7E-29 2E-33 227.2 24.6 248 6-293 1-291 (402)
38 3vtf_A UDP-glucose 6-dehydroge 100.0 5.4E-27 1.8E-31 213.5 24.8 264 6-293 22-317 (444)
39 1z82_A Glycerol-3-phosphate de 99.9 1.8E-27 6.3E-32 212.8 11.6 278 4-311 13-325 (335)
40 2ew2_A 2-dehydropantoate 2-red 99.9 5.9E-27 2E-31 207.7 13.2 267 5-295 3-312 (316)
41 1evy_A Glycerol-3-phosphate de 99.9 2.1E-27 7.1E-32 215.1 6.0 284 7-310 17-343 (366)
42 2qyt_A 2-dehydropantoate 2-red 99.9 3.4E-26 1.1E-30 203.1 11.0 261 3-292 6-314 (317)
43 1txg_A Glycerol-3-phosphate de 99.9 9.4E-25 3.2E-29 195.2 15.7 280 6-311 1-333 (335)
44 1ks9_A KPA reductase;, 2-dehyd 99.9 2.5E-26 8.6E-31 201.4 5.2 251 6-293 1-289 (291)
45 2ahr_A Putative pyrroline carb 99.9 7.1E-24 2.4E-28 182.8 19.7 249 5-294 3-258 (259)
46 2izz_A Pyrroline-5-carboxylate 99.9 8.2E-25 2.8E-29 194.4 13.8 263 2-299 19-294 (322)
47 1yqg_A Pyrroline-5-carboxylate 99.9 1.2E-24 4E-29 188.1 13.8 250 6-296 1-259 (263)
48 1yj8_A Glycerol-3-phosphate de 99.9 2.3E-25 7.8E-30 202.2 8.1 280 5-311 21-367 (375)
49 3dtt_A NADP oxidoreductase; st 99.9 4.6E-25 1.6E-29 188.5 9.3 181 4-198 18-231 (245)
50 1x0v_A GPD-C, GPDH-C, glycerol 99.9 2.2E-24 7.7E-29 194.3 11.1 280 4-311 7-349 (354)
51 2dpo_A L-gulonate 3-dehydrogen 99.9 1E-23 3.4E-28 186.1 13.0 256 5-298 6-289 (319)
52 3tri_A Pyrroline-5-carboxylate 99.9 1.8E-23 6E-28 182.0 13.5 258 4-297 2-270 (280)
53 3ghy_A Ketopantoate reductase 99.9 2.2E-22 7.7E-27 179.7 18.1 260 5-295 3-323 (335)
54 3gt0_A Pyrroline-5-carboxylate 99.9 8.3E-22 2.8E-26 168.6 20.0 230 5-263 2-241 (247)
55 3hn2_A 2-dehydropantoate 2-red 99.9 1.8E-22 6E-27 178.7 16.3 266 4-299 1-309 (312)
56 3c24_A Putative oxidoreductase 99.9 9.9E-23 3.4E-27 178.1 13.8 201 5-227 11-232 (286)
57 1zej_A HBD-9, 3-hydroxyacyl-CO 99.9 3.4E-23 1.2E-27 180.0 10.5 190 5-231 12-212 (293)
58 3hwr_A 2-dehydropantoate 2-red 99.9 6.7E-22 2.3E-26 175.3 17.7 256 3-294 17-313 (318)
59 3i83_A 2-dehydropantoate 2-red 99.9 8E-22 2.7E-26 175.0 16.3 258 4-294 1-303 (320)
60 2rcy_A Pyrroline carboxylate r 99.9 1.1E-21 3.7E-26 169.4 15.7 246 5-296 4-261 (262)
61 3d1l_A Putative NADP oxidoredu 99.9 1.8E-22 6.2E-27 174.6 10.6 202 5-229 10-216 (266)
62 3ggo_A Prephenate dehydrogenas 99.9 1.5E-20 5E-25 166.0 18.9 175 4-197 32-222 (314)
63 1bg6_A N-(1-D-carboxylethyl)-L 99.9 2.9E-20 1E-24 167.6 19.5 268 3-296 2-333 (359)
64 4e12_A Diketoreductase; oxidor 99.8 1.4E-20 4.7E-25 164.2 15.1 195 5-227 4-226 (283)
65 4fgw_A Glycerol-3-phosphate de 99.8 3.4E-21 1.2E-25 172.8 9.0 269 6-291 35-372 (391)
66 2f1k_A Prephenate dehydrogenas 99.8 1E-19 3.5E-24 158.4 18.2 196 6-226 1-211 (279)
67 2g5c_A Prephenate dehydrogenas 99.8 1.1E-19 3.8E-24 158.3 18.2 175 6-199 2-192 (281)
68 3mog_A Probable 3-hydroxybutyr 99.8 1.7E-20 5.9E-25 174.1 13.6 196 1-227 1-224 (483)
69 4huj_A Uncharacterized protein 99.8 1.6E-20 5.3E-25 157.8 11.2 170 3-187 21-205 (220)
70 1f0y_A HCDH, L-3-hydroxyacyl-C 99.8 8.8E-20 3E-24 160.6 14.3 193 5-227 15-240 (302)
71 3g17_A Similar to 2-dehydropan 99.8 2.6E-21 8.7E-26 169.8 3.7 260 4-295 1-286 (294)
72 3k6j_A Protein F01G10.3, confi 99.8 3.5E-19 1.2E-23 163.2 16.5 189 6-224 55-267 (460)
73 3ktd_A Prephenate dehydrogenas 99.8 2.9E-19 9.7E-24 158.7 14.4 174 5-198 8-205 (341)
74 1jay_A Coenzyme F420H2:NADP+ o 99.8 2.2E-19 7.4E-24 150.0 11.9 173 6-199 1-200 (212)
75 3ego_A Probable 2-dehydropanto 99.8 1.6E-20 5.4E-25 165.6 4.8 258 4-294 1-294 (307)
76 2pv7_A T-protein [includes: ch 99.8 1.5E-18 5.2E-23 152.3 15.6 184 5-224 21-206 (298)
77 2yjz_A Metalloreductase steap4 99.6 1.4E-20 4.9E-25 155.4 0.0 168 4-190 18-192 (201)
78 3b1f_A Putative prephenate deh 99.8 3.6E-18 1.2E-22 149.5 15.1 160 5-181 6-182 (290)
79 2i76_A Hypothetical protein; N 99.8 5.4E-19 1.8E-23 153.5 8.8 190 5-224 2-199 (276)
80 1wdk_A Fatty oxidation complex 99.8 5.1E-19 1.7E-23 171.9 8.0 187 5-223 314-528 (715)
81 2vns_A Metalloreductase steap3 99.7 3.7E-17 1.3E-21 136.6 16.1 168 5-190 28-204 (215)
82 2wtb_A MFP2, fatty acid multif 99.7 5.2E-18 1.8E-22 164.9 10.6 186 6-223 313-526 (725)
83 2raf_A Putative dinucleotide-b 99.7 7.4E-18 2.5E-22 140.2 10.0 153 5-195 19-191 (209)
84 1zcj_A Peroxisomal bifunctiona 99.7 3.5E-17 1.2E-21 151.8 14.7 190 5-224 37-250 (463)
85 3ado_A Lambda-crystallin; L-gu 99.7 5.4E-17 1.9E-21 142.2 11.4 198 6-230 7-231 (319)
86 3c7a_A Octopine dehydrogenase; 99.6 9.1E-15 3.1E-19 133.7 18.0 90 5-101 2-115 (404)
87 3dfu_A Uncharacterized protein 99.6 3.9E-15 1.3E-19 124.2 11.9 156 3-210 4-161 (232)
88 1np3_A Ketol-acid reductoisome 99.6 7.7E-15 2.6E-19 130.8 13.7 192 5-219 16-223 (338)
89 3zwc_A Peroxisomal bifunctiona 99.4 8.7E-13 3E-17 127.9 11.6 189 6-223 317-528 (742)
90 2i99_A MU-crystallin homolog; 99.4 3.4E-15 1.2E-19 131.6 -5.8 109 5-135 135-248 (312)
91 2gcg_A Glyoxylate reductase/hy 99.4 1.5E-12 5.3E-17 115.4 9.6 109 5-119 155-263 (330)
92 3fr7_A Putative ketol-acid red 99.4 5.6E-12 1.9E-16 114.5 12.5 199 6-225 55-283 (525)
93 2dc1_A L-aspartate dehydrogena 99.3 1.1E-13 3.7E-18 117.2 0.6 159 6-195 1-165 (236)
94 2dbq_A Glyoxylate reductase; D 99.3 6.3E-12 2.1E-16 111.6 11.2 107 5-118 150-256 (334)
95 2w2k_A D-mandelate dehydrogena 99.3 3.1E-12 1.1E-16 114.2 7.7 109 5-118 163-272 (348)
96 3gvx_A Glycerate dehydrogenase 99.3 2.4E-12 8.3E-17 111.4 6.8 105 5-119 122-226 (290)
97 3jtm_A Formate dehydrogenase, 99.3 3.3E-12 1.1E-16 113.6 7.6 110 5-119 164-273 (351)
98 3gg9_A D-3-phosphoglycerate de 99.3 6E-12 2.1E-16 112.0 7.7 109 5-119 160-268 (352)
99 1gdh_A D-glycerate dehydrogena 99.3 8.6E-12 2.9E-16 110.0 8.4 109 5-119 146-255 (320)
100 1mx3_A CTBP1, C-terminal bindi 99.3 6.8E-12 2.3E-16 111.5 7.8 109 5-119 168-276 (347)
101 4dgs_A Dehydrogenase; structur 99.2 1E-11 3.4E-16 109.9 7.7 105 5-119 171-275 (340)
102 2nac_A NAD-dependent formate d 99.2 1.2E-11 4E-16 111.4 8.2 111 4-119 190-300 (393)
103 4g2n_A D-isomer specific 2-hyd 99.2 1.1E-11 3.9E-16 109.8 7.8 108 5-119 173-280 (345)
104 2g76_A 3-PGDH, D-3-phosphoglyc 99.2 2.2E-11 7.6E-16 107.7 9.6 108 5-119 165-272 (335)
105 4e5n_A Thermostable phosphite 99.2 7.9E-12 2.7E-16 110.5 6.7 109 5-119 145-253 (330)
106 3ba1_A HPPR, hydroxyphenylpyru 99.2 5.3E-12 1.8E-16 111.7 5.5 105 5-119 164-268 (333)
107 2j6i_A Formate dehydrogenase; 99.2 1.3E-11 4.3E-16 110.7 8.0 110 5-119 164-274 (364)
108 1wwk_A Phosphoglycerate dehydr 99.2 1.6E-11 5.6E-16 107.5 8.2 108 5-119 142-249 (307)
109 2ekl_A D-3-phosphoglycerate de 99.2 1.6E-11 5.3E-16 108.0 7.7 108 5-119 142-249 (313)
110 2pi1_A D-lactate dehydrogenase 99.2 1.7E-11 5.9E-16 108.4 7.7 107 5-119 141-247 (334)
111 3hg7_A D-isomer specific 2-hyd 99.2 1E-11 3.5E-16 109.2 6.1 108 5-119 140-247 (324)
112 2d0i_A Dehydrogenase; structur 99.2 1.2E-11 4E-16 109.7 6.3 106 5-118 146-251 (333)
113 1qp8_A Formate dehydrogenase; 99.2 1.8E-11 6.2E-16 107.0 7.4 105 4-119 123-227 (303)
114 3evt_A Phosphoglycerate dehydr 99.2 1.2E-11 3.9E-16 109.0 4.7 108 5-119 137-244 (324)
115 4hy3_A Phosphoglycerate oxidor 99.2 4.3E-11 1.5E-15 106.7 8.2 108 5-119 176-283 (365)
116 1j4a_A D-LDH, D-lactate dehydr 99.2 8E-11 2.7E-15 104.3 8.9 107 5-119 146-252 (333)
117 1ygy_A PGDH, D-3-phosphoglycer 99.1 6E-11 2E-15 111.6 8.2 107 5-118 142-248 (529)
118 3pp8_A Glyoxylate/hydroxypyruv 99.1 1.2E-11 4.3E-16 108.4 3.4 108 5-119 139-246 (315)
119 2yq5_A D-isomer specific 2-hyd 99.1 4.7E-11 1.6E-15 105.7 6.7 106 5-119 148-253 (343)
120 2cuk_A Glycerate dehydrogenase 99.1 6.9E-11 2.4E-15 103.7 6.8 101 5-117 144-244 (311)
121 1sc6_A PGDH, D-3-phosphoglycer 99.1 6.3E-11 2.1E-15 107.4 6.5 106 5-119 145-250 (404)
122 3k5p_A D-3-phosphoglycerate de 99.1 9.7E-11 3.3E-15 105.8 6.0 106 5-119 156-261 (416)
123 1dxy_A D-2-hydroxyisocaproate 99.1 1.7E-10 5.7E-15 102.2 6.4 106 5-119 145-250 (333)
124 1xdw_A NAD+-dependent (R)-2-hy 99.0 2.3E-10 8E-15 101.3 6.1 106 5-119 146-251 (331)
125 2ewd_A Lactate dehydrogenase,; 99.0 4E-10 1.4E-14 99.4 7.1 66 4-70 3-81 (317)
126 1y81_A Conserved hypothetical 99.0 2.4E-10 8.2E-15 88.0 4.8 110 3-139 12-125 (138)
127 2rir_A Dipicolinate synthase, 99.0 8.4E-10 2.9E-14 96.6 8.5 93 5-107 157-251 (300)
128 3oet_A Erythronate-4-phosphate 99.0 6.8E-10 2.3E-14 99.2 8.0 106 5-119 119-227 (381)
129 2o4c_A Erythronate-4-phosphate 99.0 1.5E-09 5E-14 97.3 9.2 106 5-119 116-224 (380)
130 2hk9_A Shikimate dehydrogenase 99.0 1.1E-09 3.9E-14 94.5 8.3 92 5-103 129-222 (275)
131 3oj0_A Glutr, glutamyl-tRNA re 99.0 1.1E-09 3.9E-14 85.0 7.5 69 5-73 21-92 (144)
132 3ic5_A Putative saccharopine d 99.0 1.7E-09 5.7E-14 80.7 7.7 104 3-117 3-114 (118)
133 3e9m_A Oxidoreductase, GFO/IDH 99.0 3.6E-09 1.2E-13 93.8 11.1 110 1-119 1-117 (330)
134 3uuw_A Putative oxidoreductase 99.0 3.5E-09 1.2E-13 93.0 10.9 109 3-120 4-117 (308)
135 3db2_A Putative NADPH-dependen 99.0 5.4E-09 1.8E-13 93.6 12.3 108 3-119 3-116 (354)
136 1hyh_A L-hicdh, L-2-hydroxyiso 98.9 3.3E-09 1.1E-13 93.1 10.0 67 6-73 2-81 (309)
137 3e18_A Oxidoreductase; dehydro 98.9 8.2E-09 2.8E-13 92.6 12.0 110 1-119 1-115 (359)
138 2d5c_A AROE, shikimate 5-dehyd 98.9 4.6E-09 1.6E-13 90.1 9.6 101 7-118 118-220 (263)
139 1tlt_A Putative oxidoreductase 98.9 7.5E-09 2.6E-13 91.3 11.1 110 1-119 1-115 (319)
140 3euw_A MYO-inositol dehydrogen 98.9 8.9E-09 3E-13 91.8 11.7 107 5-120 4-116 (344)
141 3d4o_A Dipicolinate synthase s 98.9 6.5E-09 2.2E-13 90.6 9.8 92 5-106 155-248 (293)
142 4hkt_A Inositol 2-dehydrogenas 98.9 1E-08 3.5E-13 90.9 10.9 106 4-119 2-113 (331)
143 3q2i_A Dehydrogenase; rossmann 98.9 1.1E-08 3.6E-13 91.7 10.4 106 5-119 13-125 (354)
144 1x7d_A Ornithine cyclodeaminas 98.8 6.1E-09 2.1E-13 92.7 8.6 102 5-116 129-239 (350)
145 1pzg_A LDH, lactate dehydrogen 98.8 8.3E-09 2.9E-13 91.3 9.3 65 5-69 9-86 (331)
146 1a5z_A L-lactate dehydrogenase 98.8 5.8E-09 2E-13 92.0 7.8 67 6-73 1-79 (319)
147 3ezy_A Dehydrogenase; structur 98.8 1.9E-08 6.6E-13 89.6 11.2 107 5-120 2-115 (344)
148 3c85_A Putative glutathione-re 98.8 1.5E-08 5E-13 81.9 9.0 75 5-80 39-123 (183)
149 3rc1_A Sugar 3-ketoreductase; 98.8 2.4E-08 8.1E-13 89.3 10.7 108 3-119 25-139 (350)
150 2hjr_A Malate dehydrogenase; m 98.8 1.5E-08 5.1E-13 89.6 9.2 66 4-70 13-91 (328)
151 2duw_A Putative COA-binding pr 98.8 2E-09 6.7E-14 83.7 3.0 98 5-119 13-116 (145)
152 3fwz_A Inner membrane protein 98.8 2.2E-08 7.7E-13 77.2 8.7 70 5-74 7-84 (140)
153 1guz_A Malate dehydrogenase; o 98.8 2.4E-08 8.2E-13 87.7 9.9 66 6-72 1-80 (310)
154 3mz0_A Inositol 2-dehydrogenas 98.8 3E-08 1E-12 88.4 10.4 106 5-119 2-116 (344)
155 1xea_A Oxidoreductase, GFO/IDH 98.8 3.2E-08 1.1E-12 87.4 10.3 106 5-119 2-113 (323)
156 3m2t_A Probable dehydrogenase; 98.8 1.7E-08 5.8E-13 90.5 8.6 110 1-119 1-118 (359)
157 1lss_A TRK system potassium up 98.7 4.9E-08 1.7E-12 74.9 9.6 69 5-73 4-81 (140)
158 2ho3_A Oxidoreductase, GFO/IDH 98.7 9.9E-08 3.4E-12 84.3 12.2 105 6-119 2-112 (325)
159 3evn_A Oxidoreductase, GFO/IDH 98.7 4.6E-08 1.6E-12 86.6 9.8 110 1-119 1-117 (329)
160 3c1a_A Putative oxidoreductase 98.7 2.1E-08 7.1E-13 88.3 7.4 105 5-119 10-119 (315)
161 3llv_A Exopolyphosphatase-rela 98.7 4.7E-08 1.6E-12 75.4 8.6 69 5-73 6-82 (141)
162 3ec7_A Putative dehydrogenase; 98.7 5.8E-08 2E-12 87.0 10.4 108 3-119 21-137 (357)
163 2glx_A 1,5-anhydro-D-fructose 98.7 1.4E-07 4.8E-12 83.5 12.7 105 6-119 1-112 (332)
164 1u8x_X Maltose-6'-phosphate gl 98.7 1.7E-08 5.8E-13 93.1 6.7 72 1-72 24-113 (472)
165 2p2s_A Putative oxidoreductase 98.7 8.3E-08 2.8E-12 85.2 10.3 108 3-119 2-116 (336)
166 3h9u_A Adenosylhomocysteinase; 98.7 7.7E-08 2.6E-12 86.9 10.1 93 4-106 210-302 (436)
167 1v8b_A Adenosylhomocysteinase; 98.7 7E-08 2.4E-12 88.7 9.8 101 4-114 256-357 (479)
168 2z2v_A Hypothetical protein PH 98.7 1.5E-08 5.1E-13 90.9 4.9 102 5-118 16-123 (365)
169 1omo_A Alanine dehydrogenase; 98.7 8.2E-08 2.8E-12 84.6 9.6 90 5-107 125-222 (322)
170 3kb6_A D-lactate dehydrogenase 98.6 4.8E-08 1.6E-12 86.4 7.8 106 5-118 141-246 (334)
171 1lld_A L-lactate dehydrogenase 98.6 3.7E-08 1.3E-12 86.8 7.0 68 4-72 6-86 (319)
172 2g1u_A Hypothetical protein TM 98.6 3.6E-08 1.2E-12 77.4 6.1 70 5-74 19-97 (155)
173 3d64_A Adenosylhomocysteinase; 98.6 9E-08 3.1E-12 88.3 9.5 99 4-112 276-375 (494)
174 3ohs_X Trans-1,2-dihydrobenzen 98.6 2E-07 6.7E-12 82.7 11.4 107 4-119 1-116 (334)
175 2v6b_A L-LDH, L-lactate dehydr 98.6 6.9E-08 2.3E-12 84.5 8.2 67 6-72 1-78 (304)
176 1t2d_A LDH-P, L-lactate dehydr 98.6 1.2E-07 4.2E-12 83.4 9.8 64 5-69 4-80 (322)
177 3cea_A MYO-inositol 2-dehydrog 98.6 2.1E-07 7E-12 82.9 11.5 105 5-118 8-120 (346)
178 1ur5_A Malate dehydrogenase; o 98.6 2.3E-07 7.9E-12 81.3 11.1 67 5-72 2-81 (309)
179 2egg_A AROE, shikimate 5-dehyd 98.6 7.9E-08 2.7E-12 83.7 7.8 106 5-118 141-254 (297)
180 3fef_A Putative glucosidase LP 98.6 4.4E-08 1.5E-12 89.6 5.9 71 1-72 1-86 (450)
181 4dio_A NAD(P) transhydrogenase 98.6 9E-08 3.1E-12 86.0 7.5 95 5-103 190-313 (405)
182 3hdj_A Probable ornithine cycl 98.6 1.4E-07 4.7E-12 82.7 8.3 89 5-107 121-218 (313)
183 1ydw_A AX110P-like protein; st 98.6 4.4E-07 1.5E-11 81.4 11.8 108 4-120 5-122 (362)
184 3qy9_A DHPR, dihydrodipicolina 98.6 3.5E-07 1.2E-11 76.9 10.1 59 5-69 3-62 (243)
185 3p2y_A Alanine dehydrogenase/p 98.6 9.1E-08 3.1E-12 85.3 6.7 90 5-103 184-303 (381)
186 3bio_A Oxidoreductase, GFO/IDH 98.6 1.8E-07 6.2E-12 81.8 8.6 102 4-119 8-116 (304)
187 3ce6_A Adenosylhomocysteinase; 98.5 3E-07 1E-11 85.0 10.3 91 5-106 274-365 (494)
188 1h6d_A Precursor form of gluco 98.5 3.9E-07 1.3E-11 83.7 10.0 106 5-119 83-200 (433)
189 3kux_A Putative oxidoreductase 98.5 5.7E-07 1.9E-11 80.3 10.5 104 5-119 7-117 (352)
190 3e82_A Putative oxidoreductase 98.5 5.5E-07 1.9E-11 80.8 10.5 104 5-119 7-117 (364)
191 3pqe_A L-LDH, L-lactate dehydr 98.5 1.8E-07 6.2E-12 82.3 6.9 71 1-71 1-83 (326)
192 3don_A Shikimate dehydrogenase 98.5 1.2E-07 4.3E-12 81.4 5.6 96 5-107 117-215 (277)
193 3gdo_A Uncharacterized oxidore 98.5 7.2E-07 2.5E-11 79.8 10.5 108 1-119 1-115 (358)
194 1obb_A Maltase, alpha-glucosid 98.5 2.1E-07 7.1E-12 85.8 6.9 70 4-73 2-89 (480)
195 3u62_A Shikimate dehydrogenase 98.5 1.1E-07 3.8E-12 80.7 4.7 90 7-104 110-202 (253)
196 3f4l_A Putative oxidoreductase 98.5 1.8E-07 6.2E-12 83.3 6.2 105 5-119 2-115 (345)
197 3l4b_C TRKA K+ channel protien 98.5 3.9E-07 1.3E-11 75.7 7.7 68 6-73 1-77 (218)
198 3fhl_A Putative oxidoreductase 98.4 4.5E-07 1.5E-11 81.3 8.6 108 1-119 1-115 (362)
199 1y6j_A L-lactate dehydrogenase 98.4 6.6E-07 2.3E-11 78.6 9.1 69 4-72 6-85 (318)
200 2hmt_A YUAA protein; RCK, KTN, 98.4 3.7E-07 1.3E-11 70.2 6.6 68 5-72 6-81 (144)
201 2ixa_A Alpha-N-acetylgalactosa 98.4 9.1E-07 3.1E-11 81.5 10.4 108 3-119 18-141 (444)
202 3btv_A Galactose/lactose metab 98.4 4.7E-07 1.6E-11 83.3 8.3 110 5-119 20-145 (438)
203 3n58_A Adenosylhomocysteinase; 98.4 9.7E-07 3.3E-11 79.7 10.0 92 4-106 246-338 (464)
204 1f06_A MESO-diaminopimelate D- 98.4 2.7E-07 9.1E-12 81.3 6.2 73 4-80 2-76 (320)
205 3v5n_A Oxidoreductase; structu 98.4 1.8E-06 6.2E-11 78.8 11.8 106 5-119 37-160 (417)
206 3moi_A Probable dehydrogenase; 98.4 9.9E-07 3.4E-11 79.8 9.9 107 4-119 1-114 (387)
207 3dty_A Oxidoreductase, GFO/IDH 98.4 9.6E-07 3.3E-11 80.2 9.7 107 4-119 11-135 (398)
208 3tl2_A Malate dehydrogenase; c 98.4 7E-07 2.4E-11 78.2 8.4 71 1-71 4-88 (315)
209 3u3x_A Oxidoreductase; structu 98.4 1.8E-06 6.1E-11 77.3 11.2 107 4-119 25-138 (361)
210 1oju_A MDH, malate dehydrogena 98.4 3E-07 1E-11 79.7 5.8 65 6-71 1-79 (294)
211 3gvp_A Adenosylhomocysteinase 98.4 1.3E-06 4.5E-11 78.7 10.0 92 4-106 219-311 (435)
212 3gvi_A Malate dehydrogenase; N 98.4 5.7E-07 1.9E-11 79.0 7.5 67 4-71 6-85 (324)
213 2vhw_A Alanine dehydrogenase; 98.4 1.6E-06 5.5E-11 78.0 10.3 68 5-72 168-242 (377)
214 2nvw_A Galactose/lactose metab 98.4 1.2E-06 4.2E-11 81.3 9.7 106 5-119 39-164 (479)
215 3p7m_A Malate dehydrogenase; p 98.4 8.4E-07 2.9E-11 77.9 8.0 69 3-71 3-83 (321)
216 3d0o_A L-LDH 1, L-lactate dehy 98.3 2.4E-06 8.1E-11 75.1 10.1 70 3-72 4-85 (317)
217 1iuk_A Hypothetical protein TT 98.3 1.8E-07 6E-12 72.0 2.3 99 5-119 13-116 (140)
218 1s6y_A 6-phospho-beta-glucosid 98.3 8.5E-07 2.9E-11 81.4 7.0 69 5-73 7-95 (450)
219 3i23_A Oxidoreductase, GFO/IDH 98.3 1E-06 3.6E-11 78.5 7.2 105 4-119 1-115 (349)
220 4had_A Probable oxidoreductase 98.3 2.7E-06 9.1E-11 75.8 9.5 105 6-119 24-136 (350)
221 3abi_A Putative uncharacterize 98.3 9.1E-07 3.1E-11 79.4 6.2 68 5-73 16-89 (365)
222 1x13_A NAD(P) transhydrogenase 98.3 2.9E-06 9.9E-11 76.9 9.5 64 5-68 172-262 (401)
223 1leh_A Leucine dehydrogenase; 98.3 1.3E-06 4.4E-11 77.8 6.8 67 4-71 172-240 (364)
224 4gmf_A Yersiniabactin biosynth 98.2 7E-07 2.4E-11 80.1 4.4 106 5-120 7-119 (372)
225 1id1_A Putative potassium chan 98.2 3E-06 1E-10 66.1 7.5 71 3-73 1-83 (153)
226 1zh8_A Oxidoreductase; TM0312, 98.2 6.9E-06 2.4E-10 72.9 10.8 106 5-119 18-132 (340)
227 2i6t_A Ubiquitin-conjugating e 98.2 1.8E-06 6E-11 75.3 6.7 63 6-69 15-85 (303)
228 3oqb_A Oxidoreductase; structu 98.2 5.2E-06 1.8E-10 74.9 9.9 110 1-119 2-133 (383)
229 2d59_A Hypothetical protein PH 98.2 1.2E-06 4.1E-11 67.7 4.8 71 5-82 22-96 (144)
230 3phh_A Shikimate dehydrogenase 98.2 1.3E-06 4.6E-11 74.4 5.6 95 5-105 118-212 (269)
231 3nep_X Malate dehydrogenase; h 98.2 1.8E-06 6.1E-11 75.5 6.4 67 6-72 1-80 (314)
232 3ulk_A Ketol-acid reductoisome 98.2 4.8E-06 1.7E-10 74.6 9.1 81 5-88 37-123 (491)
233 1gpj_A Glutamyl-tRNA reductase 98.2 2.5E-06 8.5E-11 77.6 7.2 69 5-73 167-239 (404)
234 2eez_A Alanine dehydrogenase; 98.2 7.1E-06 2.4E-10 73.7 10.1 68 5-72 166-240 (369)
235 4gqa_A NAD binding oxidoreduct 98.2 6.1E-06 2.1E-10 75.2 9.8 105 6-119 27-146 (412)
236 3o8q_A Shikimate 5-dehydrogena 98.2 8.5E-07 2.9E-11 76.4 3.8 94 5-105 126-224 (281)
237 3fi9_A Malate dehydrogenase; s 98.2 4.3E-06 1.5E-10 73.9 8.1 66 5-70 8-85 (343)
238 1l7d_A Nicotinamide nucleotide 98.2 1E-05 3.4E-10 73.1 10.4 65 5-69 172-265 (384)
239 3l9w_A Glutathione-regulated p 98.1 4.6E-06 1.6E-10 75.9 8.0 70 5-74 4-81 (413)
240 1ldn_A L-lactate dehydrogenase 98.1 3.1E-06 1.1E-10 74.3 6.6 69 4-72 5-85 (316)
241 1ez4_A Lactate dehydrogenase; 98.1 9.9E-06 3.4E-10 71.1 9.4 68 5-72 5-83 (318)
242 1nyt_A Shikimate 5-dehydrogena 98.1 8.8E-06 3E-10 69.8 8.9 93 5-105 119-217 (271)
243 4fb5_A Probable oxidoreductase 98.1 1.5E-05 5.1E-10 71.9 10.8 105 6-119 26-144 (393)
244 2zqz_A L-LDH, L-lactate dehydr 98.1 1.1E-05 3.7E-10 71.1 9.4 68 5-72 9-87 (326)
245 3vku_A L-LDH, L-lactate dehydr 98.1 6.1E-06 2.1E-10 72.4 7.2 67 5-71 9-86 (326)
246 3upl_A Oxidoreductase; rossman 98.1 1.2E-05 4.1E-10 73.2 9.3 68 5-72 23-118 (446)
247 1p77_A Shikimate 5-dehydrogena 98.0 3.5E-06 1.2E-10 72.3 5.0 95 5-107 119-219 (272)
248 2axq_A Saccharopine dehydrogen 98.0 1.3E-05 4.4E-10 74.0 8.9 95 4-108 22-125 (467)
249 3ond_A Adenosylhomocysteinase; 98.0 2.2E-05 7.4E-10 72.1 10.3 91 3-104 263-354 (488)
250 2nu8_A Succinyl-COA ligase [AD 98.0 3.4E-05 1.1E-09 66.7 10.5 105 5-120 7-115 (288)
251 3ip3_A Oxidoreductase, putativ 98.0 4.4E-06 1.5E-10 74.1 4.8 106 4-119 1-117 (337)
252 4ew6_A D-galactose-1-dehydroge 98.0 1.5E-05 5.2E-10 70.4 8.2 102 4-120 24-132 (330)
253 3pwz_A Shikimate dehydrogenase 98.0 1.2E-05 4.1E-10 68.9 7.2 93 5-105 120-218 (272)
254 1lc0_A Biliverdin reductase A; 98.0 1.7E-05 5.9E-10 68.8 8.2 102 5-120 7-116 (294)
255 4h3v_A Oxidoreductase domain p 98.0 2E-05 7E-10 70.9 8.9 102 6-116 7-122 (390)
256 1npy_A Hypothetical shikimate 98.0 9.5E-06 3.2E-10 69.5 6.3 67 5-73 119-187 (271)
257 1pjc_A Protein (L-alanine dehy 97.9 2.8E-05 9.7E-10 69.5 9.2 68 5-72 167-241 (361)
258 3ldh_A Lactate dehydrogenase; 97.9 6.6E-06 2.3E-10 72.1 4.8 66 5-71 21-99 (330)
259 3o9z_A Lipopolysaccaride biosy 97.9 2.3E-05 8E-10 68.6 8.2 105 5-119 3-122 (312)
260 3oa2_A WBPB; oxidoreductase, s 97.9 2.6E-05 8.7E-10 68.5 8.3 105 5-119 3-123 (318)
261 4f3y_A DHPR, dihydrodipicolina 97.9 1.1E-05 3.7E-10 69.0 5.6 68 5-72 7-84 (272)
262 1nvm_B Acetaldehyde dehydrogen 97.9 1.4E-05 4.7E-10 69.9 6.2 71 4-74 3-84 (312)
263 1ff9_A Saccharopine reductase; 97.9 1.5E-05 5.2E-10 73.3 6.8 69 5-73 3-80 (450)
264 1smk_A Malate dehydrogenase, g 97.9 1.9E-05 6.5E-10 69.6 7.0 68 4-71 7-86 (326)
265 3jyo_A Quinate/shikimate dehyd 97.9 2.4E-05 8.3E-10 67.4 7.5 94 5-105 127-232 (283)
266 1dih_A Dihydrodipicolinate red 97.9 6.2E-06 2.1E-10 70.7 3.6 70 1-70 1-81 (273)
267 3e8x_A Putative NAD-dependent 97.9 5E-05 1.7E-09 63.4 9.0 68 3-70 19-93 (236)
268 2czc_A Glyceraldehyde-3-phosph 97.9 5.2E-05 1.8E-09 67.0 9.4 70 5-74 2-92 (334)
269 1mld_A Malate dehydrogenase; o 97.9 3.7E-05 1.3E-09 67.3 8.2 66 6-71 1-78 (314)
270 3mtj_A Homoserine dehydrogenas 97.9 4.7E-05 1.6E-09 69.5 9.1 67 4-71 9-88 (444)
271 3ijp_A DHPR, dihydrodipicolina 97.9 2.3E-05 7.7E-10 67.3 6.6 68 4-71 20-98 (288)
272 4aj2_A L-lactate dehydrogenase 97.8 2.9E-05 9.8E-10 68.3 7.0 65 5-70 19-96 (331)
273 2xxj_A L-LDH, L-lactate dehydr 97.8 2.5E-05 8.5E-10 68.2 6.0 67 6-72 1-78 (310)
274 4g65_A TRK system potassium up 97.8 1.9E-05 6.6E-10 72.8 5.2 69 5-73 3-80 (461)
275 1edz_A 5,10-methylenetetrahydr 97.8 2.1E-05 7.2E-10 68.4 5.0 88 5-104 177-277 (320)
276 2d4a_B Malate dehydrogenase; a 97.8 3.2E-05 1.1E-09 67.5 6.0 65 7-72 1-78 (308)
277 3ius_A Uncharacterized conserv 97.8 3.7E-05 1.2E-09 66.1 6.3 66 4-71 4-73 (286)
278 3ew7_A LMO0794 protein; Q8Y8U8 97.7 5.6E-05 1.9E-09 62.2 7.0 65 6-71 1-71 (221)
279 3ngx_A Bifunctional protein fo 97.7 0.0001 3.5E-09 62.5 8.4 75 5-105 150-225 (276)
280 3eag_A UDP-N-acetylmuramate:L- 97.7 0.00024 8.1E-09 62.5 11.1 116 5-120 4-134 (326)
281 1j5p_A Aspartate dehydrogenase 97.7 1.7E-05 5.8E-10 66.6 3.3 95 5-118 12-110 (253)
282 3qvo_A NMRA family protein; st 97.7 1.8E-05 6.1E-10 66.2 3.4 68 4-71 22-98 (236)
283 2aef_A Calcium-gated potassium 97.7 2.7E-05 9.2E-10 65.1 4.4 67 5-73 9-83 (234)
284 3fbt_A Chorismate mutase and s 97.7 2.7E-05 9.2E-10 66.9 4.2 66 5-72 122-189 (282)
285 1oi7_A Succinyl-COA synthetase 97.7 5.4E-05 1.9E-09 65.3 6.0 105 5-120 7-115 (288)
286 3r6d_A NAD-dependent epimerase 97.7 9E-05 3.1E-09 61.1 7.2 42 4-45 4-48 (221)
287 4a26_A Putative C-1-tetrahydro 97.7 0.00011 3.7E-09 63.1 7.8 74 5-104 165-241 (300)
288 2vt3_A REX, redox-sensing tran 97.7 1.1E-05 3.8E-10 66.4 1.6 68 6-73 86-157 (215)
289 1b8p_A Protein (malate dehydro 97.7 0.00011 3.8E-09 64.7 8.1 69 1-69 1-91 (329)
290 3h2s_A Putative NADH-flavin re 97.6 0.00016 5.6E-09 59.5 8.3 66 6-71 1-72 (224)
291 3tnl_A Shikimate dehydrogenase 97.6 0.00011 3.7E-09 64.2 7.3 68 5-72 154-237 (315)
292 3lk7_A UDP-N-acetylmuramoylala 97.6 0.0003 1E-08 64.8 10.5 115 5-119 9-137 (451)
293 2ozp_A N-acetyl-gamma-glutamyl 97.6 7E-05 2.4E-09 66.4 5.7 89 5-104 4-101 (345)
294 4ina_A Saccharopine dehydrogen 97.6 0.00012 3.9E-09 66.5 7.0 67 6-72 2-87 (405)
295 1xyg_A Putative N-acetyl-gamma 97.6 0.00018 6.1E-09 64.1 7.8 89 5-105 16-115 (359)
296 2c2x_A Methylenetetrahydrofola 97.5 0.00028 9.4E-09 60.0 8.5 74 5-104 158-234 (281)
297 1b0a_A Protein (fold bifunctio 97.5 0.00047 1.6E-08 58.7 9.9 74 5-104 159-233 (288)
298 1a4i_A Methylenetetrahydrofola 97.5 0.00038 1.3E-08 59.7 9.3 75 5-105 165-240 (301)
299 1cf2_P Protein (glyceraldehyde 97.5 0.00013 4.3E-09 64.5 6.5 69 6-74 2-91 (337)
300 3t4e_A Quinate/shikimate dehyd 97.5 0.0002 6.7E-09 62.4 7.6 68 5-72 148-231 (312)
301 3l07_A Bifunctional protein fo 97.5 0.00042 1.4E-08 59.0 9.3 75 5-105 161-236 (285)
302 1vl6_A Malate oxidoreductase; 97.5 0.0005 1.7E-08 61.1 10.1 93 4-106 191-298 (388)
303 1p9l_A Dihydrodipicolinate red 97.5 0.0012 3.9E-08 55.5 11.9 88 6-117 1-92 (245)
304 3dfz_A SIRC, precorrin-2 dehyd 97.5 0.00056 1.9E-08 56.5 9.8 68 5-73 31-103 (223)
305 2nqt_A N-acetyl-gamma-glutamyl 97.5 8E-05 2.7E-09 66.1 5.0 89 5-105 9-113 (352)
306 1hdo_A Biliverdin IX beta redu 97.5 8.7E-05 3E-09 60.2 4.9 37 5-41 3-40 (206)
307 2yv1_A Succinyl-COA ligase [AD 97.5 0.00013 4.4E-09 63.2 6.1 103 6-120 14-121 (294)
308 1jw9_B Molybdopterin biosynthe 97.5 0.00016 5.3E-09 61.1 6.5 33 6-38 32-65 (249)
309 1ys4_A Aspartate-semialdehyde 97.5 6.6E-05 2.2E-09 66.9 4.1 91 4-104 7-116 (354)
310 3p2o_A Bifunctional protein fo 97.5 0.00054 1.9E-08 58.3 9.4 75 5-105 160-235 (285)
311 1b7g_O Protein (glyceraldehyde 97.5 0.0004 1.4E-08 61.3 8.8 68 6-73 2-89 (340)
312 2x0j_A Malate dehydrogenase; o 97.5 0.00012 4E-09 63.3 5.1 64 6-69 1-77 (294)
313 1nvt_A Shikimate 5'-dehydrogen 97.4 7.6E-05 2.6E-09 64.5 3.8 95 5-105 128-233 (287)
314 1c1d_A L-phenylalanine dehydro 97.4 0.00042 1.5E-08 61.2 8.4 64 4-68 174-238 (355)
315 1u8f_O GAPDH, glyceraldehyde-3 97.4 0.00049 1.7E-08 60.6 8.8 70 5-74 3-104 (335)
316 2yyy_A Glyceraldehyde-3-phosph 97.4 0.00084 2.9E-08 59.3 10.3 68 6-73 3-93 (343)
317 4a5o_A Bifunctional protein fo 97.4 0.00059 2E-08 58.1 8.5 75 5-105 161-236 (286)
318 3dhn_A NAD-dependent epimerase 97.4 0.00013 4.6E-09 60.2 4.2 65 5-70 4-76 (227)
319 2yv2_A Succinyl-COA synthetase 97.4 0.00031 1.1E-08 60.8 6.6 152 6-172 14-175 (297)
320 3c8m_A Homoserine dehydrogenas 97.4 0.00042 1.4E-08 61.0 7.5 70 3-72 4-97 (331)
321 3do5_A HOM, homoserine dehydro 97.3 0.00052 1.8E-08 60.2 7.8 68 6-73 3-92 (327)
322 2r6j_A Eugenol synthase 1; phe 97.3 0.00045 1.5E-08 60.2 7.4 65 6-70 12-88 (318)
323 3ing_A Homoserine dehydrogenas 97.3 0.00021 7.1E-09 62.7 5.1 69 4-72 3-93 (325)
324 2fp4_A Succinyl-COA ligase [GD 97.3 0.00031 1.1E-08 61.0 6.2 106 3-119 11-121 (305)
325 3hhp_A Malate dehydrogenase; M 97.3 0.00043 1.5E-08 60.3 7.0 66 6-71 1-79 (312)
326 1o6z_A MDH, malate dehydrogena 97.3 0.0005 1.7E-08 59.8 7.3 65 6-70 1-79 (303)
327 1y7t_A Malate dehydrogenase; N 97.3 0.00037 1.3E-08 61.3 6.3 66 3-68 2-87 (327)
328 2hjs_A USG-1 protein homolog; 97.2 4.4E-05 1.5E-09 67.5 -0.4 91 4-105 5-102 (340)
329 4dpk_A Malonyl-COA/succinyl-CO 97.2 0.00012 4.1E-09 65.1 2.4 90 5-105 7-113 (359)
330 4dpl_A Malonyl-COA/succinyl-CO 97.2 0.00012 4.1E-09 65.1 2.4 90 5-105 7-113 (359)
331 3gpi_A NAD-dependent epimerase 97.2 0.00019 6.4E-09 61.6 3.6 61 5-69 3-71 (286)
332 3i6i_A Putative leucoanthocyan 97.2 0.00083 2.8E-08 59.3 7.6 67 5-71 10-93 (346)
333 3m2p_A UDP-N-acetylglucosamine 97.2 0.00051 1.7E-08 59.7 6.1 65 4-70 1-71 (311)
334 2wm3_A NMRA-like family domain 97.2 0.00078 2.7E-08 58.1 7.2 66 5-70 5-81 (299)
335 1lnq_A MTHK channels, potassiu 97.1 0.00035 1.2E-08 61.6 4.9 66 6-73 116-189 (336)
336 3dqp_A Oxidoreductase YLBE; al 97.1 0.00024 8.1E-09 58.5 3.5 37 6-42 1-38 (219)
337 2ep5_A 350AA long hypothetical 97.1 0.00022 7.4E-09 63.4 3.3 90 4-104 3-110 (350)
338 2dt5_A AT-rich DNA-binding pro 97.1 6.4E-05 2.2E-09 61.7 -0.2 68 6-73 81-152 (211)
339 3dr3_A N-acetyl-gamma-glutamyl 97.1 0.00025 8.7E-09 62.4 3.6 90 6-105 5-109 (337)
340 1qyc_A Phenylcoumaran benzylic 97.1 0.0011 3.7E-08 57.4 7.5 67 5-71 4-87 (308)
341 2ejw_A HDH, homoserine dehydro 97.1 0.00014 4.8E-09 63.9 1.7 66 5-73 3-78 (332)
342 1xgk_A Nitrogen metabolite rep 97.1 0.001 3.5E-08 59.1 7.4 71 1-71 1-83 (352)
343 3c1o_A Eugenol synthase; pheny 97.1 0.0012 4E-08 57.5 7.5 67 5-71 4-87 (321)
344 1qyd_A Pinoresinol-lariciresin 97.1 0.0012 4E-08 57.2 7.5 67 5-71 4-86 (313)
345 3e5r_O PP38, glyceraldehyde-3- 97.1 0.00051 1.7E-08 60.5 4.9 69 5-73 3-105 (337)
346 3keo_A Redox-sensing transcrip 97.0 0.00012 4.1E-09 59.9 0.7 67 6-73 85-160 (212)
347 3e48_A Putative nucleoside-dip 97.0 0.0005 1.7E-08 59.0 4.6 66 6-71 1-75 (289)
348 3ruf_A WBGU; rossmann fold, UD 97.0 0.00093 3.2E-08 59.0 6.5 69 2-70 22-109 (351)
349 3slg_A PBGP3 protein; structur 97.0 0.00048 1.7E-08 61.4 4.7 67 3-69 22-99 (372)
350 2b0j_A 5,10-methenyltetrahydro 97.0 0.013 4.4E-07 49.3 12.6 114 48-179 128-242 (358)
351 2gas_A Isoflavone reductase; N 97.0 0.0012 4.1E-08 57.0 6.9 67 5-71 2-86 (307)
352 1lu9_A Methylene tetrahydromet 96.9 0.0017 5.9E-08 55.9 7.2 42 4-45 118-160 (287)
353 2x4g_A Nucleoside-diphosphate- 96.9 0.00086 2.9E-08 58.9 5.4 66 5-70 13-86 (342)
354 1xq6_A Unknown protein; struct 96.9 0.0025 8.5E-08 53.1 7.8 66 4-70 3-78 (253)
355 3hn7_A UDP-N-acetylmuramate-L- 96.9 0.0046 1.6E-07 57.9 10.3 118 3-120 17-148 (524)
356 1y1p_A ARII, aldehyde reductas 96.9 0.0028 9.4E-08 55.5 8.3 41 4-44 10-51 (342)
357 3u95_A Glycoside hydrolase, fa 96.8 0.00049 1.7E-08 63.6 2.8 64 6-69 1-84 (477)
358 1up7_A 6-phospho-beta-glucosid 96.8 0.0026 8.9E-08 57.6 7.5 67 5-71 2-83 (417)
359 3pwk_A Aspartate-semialdehyde 96.8 0.00013 4.6E-09 64.8 -1.1 91 4-104 1-97 (366)
360 2jl1_A Triphenylmethane reduct 96.8 0.0012 3.9E-08 56.5 4.8 65 6-70 1-75 (287)
361 4hv4_A UDP-N-acetylmuramate--L 96.8 0.0048 1.6E-07 57.4 9.3 114 6-120 23-148 (494)
362 3enk_A UDP-glucose 4-epimerase 96.8 0.0017 5.8E-08 57.0 6.0 40 1-40 1-41 (341)
363 3tum_A Shikimate dehydrogenase 96.8 0.0022 7.4E-08 54.6 6.4 68 5-72 125-198 (269)
364 1hye_A L-lactate/malate dehydr 96.8 0.002 6.8E-08 56.2 6.2 64 6-69 1-82 (313)
365 1zud_1 Adenylyltransferase THI 96.8 0.0026 8.9E-08 53.6 6.6 34 5-38 28-62 (251)
366 3kkj_A Amine oxidase, flavin-c 96.8 0.0012 4.2E-08 55.0 4.7 34 5-38 2-35 (336)
367 4hb9_A Similarities with proba 96.7 0.0013 4.5E-08 59.0 5.0 35 5-39 1-35 (412)
368 2ydy_A Methionine adenosyltran 96.7 0.002 6.9E-08 55.9 6.0 66 4-70 1-69 (315)
369 3ff4_A Uncharacterized protein 96.7 0.00091 3.1E-08 49.7 3.2 70 5-82 4-77 (122)
370 2c5a_A GDP-mannose-3', 5'-epim 96.7 0.0014 4.8E-08 58.7 5.1 66 4-69 28-101 (379)
371 5mdh_A Malate dehydrogenase; o 96.7 0.0016 5.6E-08 57.2 5.2 65 5-69 3-87 (333)
372 4b4o_A Epimerase family protei 96.7 0.00082 2.8E-08 58.0 3.2 58 6-69 1-59 (298)
373 2r00_A Aspartate-semialdehyde 96.7 0.00018 6.3E-09 63.4 -1.2 89 5-104 3-98 (336)
374 2bka_A CC3, TAT-interacting pr 96.6 0.00095 3.3E-08 55.6 2.8 37 4-40 17-56 (242)
375 3hsk_A Aspartate-semialdehyde 96.6 0.00081 2.8E-08 60.1 2.3 93 3-105 17-127 (381)
376 2gn4_A FLAA1 protein, UDP-GLCN 96.5 0.0045 1.6E-07 54.6 6.9 68 3-70 19-100 (344)
377 4h7p_A Malate dehydrogenase; s 96.5 0.0061 2.1E-07 53.7 7.6 63 6-68 25-107 (345)
378 1ebf_A Homoserine dehydrogenas 96.5 0.0012 4E-08 58.8 3.0 66 5-73 4-96 (358)
379 2x5o_A UDP-N-acetylmuramoylala 96.5 0.003 1E-07 57.8 5.8 65 3-68 3-71 (439)
380 3h2z_A Mannitol-1-phosphate 5- 96.5 0.0065 2.2E-07 54.3 7.5 66 6-71 1-89 (382)
381 2vou_A 2,6-dihydroxypyridine h 96.4 0.0032 1.1E-07 56.7 5.4 39 1-39 1-39 (397)
382 2zcu_A Uncharacterized oxidore 96.4 0.003 1E-07 53.8 5.0 64 7-70 1-74 (286)
383 3h8v_A Ubiquitin-like modifier 96.4 0.007 2.4E-07 52.0 7.2 34 5-38 36-70 (292)
384 1c0p_A D-amino acid oxidase; a 96.4 0.0038 1.3E-07 55.3 5.7 37 1-37 2-38 (363)
385 2c29_D Dihydroflavonol 4-reduc 96.4 0.01 3.5E-07 51.9 8.3 68 1-68 1-84 (337)
386 3two_A Mannitol dehydrogenase; 96.3 0.006 2.1E-07 53.9 6.6 75 6-81 178-253 (348)
387 1e3i_A Alcohol dehydrogenase, 96.3 0.029 9.8E-07 50.0 11.0 45 6-50 197-242 (376)
388 3cps_A Glyceraldehyde 3-phosph 96.3 0.015 5E-07 51.4 8.8 31 5-35 17-48 (354)
389 3sc6_A DTDP-4-dehydrorhamnose 96.3 0.0028 9.6E-08 54.1 4.1 58 4-69 4-64 (287)
390 1vkn_A N-acetyl-gamma-glutamyl 96.3 0.014 4.9E-07 51.4 8.6 87 6-105 14-110 (351)
391 3uko_A Alcohol dehydrogenase c 96.3 0.013 4.5E-07 52.3 8.5 75 6-81 195-282 (378)
392 4gx0_A TRKA domain protein; me 96.3 0.0016 5.3E-08 61.7 2.4 67 6-73 349-420 (565)
393 1p0f_A NADP-dependent alcohol 96.3 0.027 9.1E-07 50.2 10.4 74 6-80 193-279 (373)
394 1sb8_A WBPP; epimerase, 4-epim 96.2 0.011 3.6E-07 52.1 7.7 67 4-70 26-111 (352)
395 2dvm_A Malic enzyme, 439AA lon 96.2 0.0056 1.9E-07 55.6 5.6 89 5-103 186-297 (439)
396 2a9f_A Putative malic enzyme ( 96.2 0.0056 1.9E-07 54.5 5.4 91 5-106 188-293 (398)
397 1cdo_A Alcohol dehydrogenase; 96.2 0.036 1.2E-06 49.4 10.8 45 6-50 194-239 (374)
398 2jhf_A Alcohol dehydrogenase E 96.2 0.029 1E-06 49.9 10.1 45 6-50 193-238 (374)
399 2yy7_A L-threonine dehydrogena 96.1 0.0043 1.5E-07 53.6 4.5 65 4-70 1-77 (312)
400 4gx0_A TRKA domain protein; me 96.1 0.0091 3.1E-07 56.4 7.0 67 5-72 127-202 (565)
401 2a35_A Hypothetical protein PA 96.1 0.0041 1.4E-07 50.5 4.0 40 1-40 1-43 (215)
402 4id9_A Short-chain dehydrogena 96.1 0.0069 2.4E-07 53.2 5.7 59 5-69 19-85 (347)
403 1e6u_A GDP-fucose synthetase; 96.1 0.0063 2.2E-07 52.8 5.4 60 4-70 2-64 (321)
404 2bll_A Protein YFBG; decarboxy 96.1 0.0067 2.3E-07 53.1 5.5 64 6-69 1-75 (345)
405 2rh8_A Anthocyanidin reductase 96.1 0.022 7.5E-07 49.7 8.8 64 5-68 9-87 (338)
406 3oh8_A Nucleoside-diphosphate 96.1 0.005 1.7E-07 57.6 4.8 63 5-70 147-210 (516)
407 2p4q_A 6-phosphogluconate dehy 96.1 0.069 2.4E-06 49.5 12.4 128 182-313 322-460 (497)
408 2d8a_A PH0655, probable L-thre 96.0 0.017 5.7E-07 51.0 7.8 44 6-49 169-213 (348)
409 3m1a_A Putative dehydrogenase; 96.0 0.011 3.6E-07 50.4 6.4 46 1-46 1-47 (281)
410 2iz1_A 6-phosphogluconate dehy 96.0 0.078 2.7E-06 48.9 12.4 128 182-313 317-455 (474)
411 1e3j_A NADP(H)-dependent ketos 96.0 0.036 1.2E-06 48.9 9.9 45 6-50 170-214 (352)
412 2csu_A 457AA long hypothetical 96.0 0.0059 2E-07 56.1 4.7 73 3-82 6-83 (457)
413 2zyd_A 6-phosphogluconate dehy 96.0 0.062 2.1E-06 49.6 11.6 128 182-313 325-463 (480)
414 2fzw_A Alcohol dehydrogenase c 96.0 0.036 1.2E-06 49.3 9.8 45 6-50 192-237 (373)
415 3rui_A Ubiquitin-like modifier 96.0 0.015 5.1E-07 51.0 6.9 34 5-38 34-68 (340)
416 2zbw_A Thioredoxin reductase; 96.0 0.0056 1.9E-07 53.4 4.4 39 1-39 1-39 (335)
417 1rjw_A ADH-HT, alcohol dehydro 95.9 0.025 8.4E-07 49.7 8.5 45 5-49 165-209 (339)
418 1y56_B Sarcosine oxidase; dehy 95.9 0.007 2.4E-07 53.9 4.9 37 1-37 1-37 (382)
419 1yvv_A Amine oxidase, flavin-c 95.9 0.007 2.4E-07 52.8 4.8 34 5-38 2-35 (336)
420 1ek6_A UDP-galactose 4-epimera 95.9 0.015 5.2E-07 50.9 6.9 34 4-37 1-35 (348)
421 3vps_A TUNA, NAD-dependent epi 95.9 0.0077 2.6E-07 52.1 4.9 36 4-39 6-42 (321)
422 3b1j_A Glyceraldehyde 3-phosph 95.9 0.023 8E-07 49.9 7.9 68 5-72 2-102 (339)
423 1pl8_A Human sorbitol dehydrog 95.9 0.032 1.1E-06 49.3 9.0 45 6-50 173-218 (356)
424 1uls_A Putative 3-oxoacyl-acyl 95.9 0.027 9.2E-07 46.9 8.0 46 1-46 1-47 (245)
425 1uuf_A YAHK, zinc-type alcohol 95.9 0.012 4.1E-07 52.4 6.2 75 6-81 196-276 (369)
426 2pzm_A Putative nucleotide sug 95.9 0.0045 1.6E-07 54.1 3.3 37 3-39 18-55 (330)
427 1kyq_A Met8P, siroheme biosynt 95.9 0.004 1.4E-07 53.0 2.8 34 5-38 13-46 (274)
428 2z1m_A GDP-D-mannose dehydrata 95.8 0.0092 3.1E-07 52.2 5.2 37 4-40 2-39 (345)
429 1fmc_A 7 alpha-hydroxysteroid 95.8 0.021 7.1E-07 47.7 7.2 40 5-44 11-51 (255)
430 4dyv_A Short-chain dehydrogena 95.8 0.02 6.7E-07 48.7 7.1 41 6-46 28-70 (272)
431 1t4b_A Aspartate-semialdehyde 95.8 0.0027 9.3E-08 56.5 1.7 90 6-104 2-100 (367)
432 3ai3_A NADPH-sorbose reductase 95.8 0.027 9.3E-07 47.4 7.9 40 5-44 7-47 (263)
433 3st7_A Capsular polysaccharide 95.8 0.0076 2.6E-07 53.5 4.5 52 6-69 1-54 (369)
434 4e6p_A Probable sorbitol dehyd 95.8 0.026 8.8E-07 47.5 7.6 40 6-45 9-49 (259)
435 3ko8_A NAD-dependent epimerase 95.7 0.0072 2.5E-07 52.2 4.0 36 6-41 1-37 (312)
436 2f00_A UDP-N-acetylmuramate--L 95.7 0.015 5.3E-07 53.9 6.5 62 6-68 20-85 (491)
437 1yqd_A Sinapyl alcohol dehydro 95.7 0.019 6.6E-07 51.0 6.9 46 5-50 188-234 (366)
438 2ph5_A Homospermidine synthase 95.7 0.011 3.6E-07 54.2 5.1 35 5-39 13-51 (480)
439 3s2e_A Zinc-containing alcohol 95.7 0.039 1.4E-06 48.4 8.8 44 6-49 168-211 (340)
440 3dii_A Short-chain dehydrogena 95.7 0.031 1.1E-06 46.6 7.8 42 5-46 2-44 (247)
441 4gsl_A Ubiquitin-like modifier 95.7 0.016 5.5E-07 54.6 6.4 34 5-38 326-360 (615)
442 3nix_A Flavoprotein/dehydrogen 95.7 0.0069 2.4E-07 54.7 4.0 38 1-38 1-38 (421)
443 2qrj_A Saccharopine dehydrogen 95.7 0.02 6.7E-07 51.1 6.7 81 5-104 214-302 (394)
444 3sxp_A ADP-L-glycero-D-mannohe 95.7 0.012 4.1E-07 52.0 5.4 35 5-39 10-47 (362)
445 1rkx_A CDP-glucose-4,6-dehydra 95.7 0.0084 2.9E-07 52.9 4.3 67 4-70 8-89 (357)
446 2h6e_A ADH-4, D-arabinose 1-de 95.7 0.023 7.9E-07 50.0 7.1 46 5-50 171-218 (344)
447 3ihm_A Styrene monooxygenase A 95.7 0.01 3.4E-07 54.1 4.9 35 4-38 21-55 (430)
448 2bi7_A UDP-galactopyranose mut 95.7 0.011 3.9E-07 52.9 5.2 36 4-39 2-37 (384)
449 3uog_A Alcohol dehydrogenase; 95.7 0.037 1.3E-06 49.1 8.5 44 6-49 191-234 (363)
450 3h5n_A MCCB protein; ubiquitin 95.7 0.033 1.1E-06 49.3 8.1 34 5-38 118-152 (353)
451 2pgd_A 6-phosphogluconate dehy 95.6 0.049 1.7E-06 50.3 9.5 127 183-313 315-452 (482)
452 4egb_A DTDP-glucose 4,6-dehydr 95.6 0.0063 2.1E-07 53.4 3.3 36 3-38 22-60 (346)
453 1orr_A CDP-tyvelose-2-epimeras 95.6 0.026 9E-07 49.3 7.3 65 6-70 2-82 (347)
454 1p3d_A UDP-N-acetylmuramate--a 95.6 0.015 5.2E-07 53.7 5.9 62 6-68 19-84 (475)
455 2xdo_A TETX2 protein; tetracyc 95.6 0.013 4.4E-07 52.7 5.3 35 5-39 26-60 (398)
456 3guy_A Short-chain dehydrogena 95.6 0.068 2.3E-06 43.9 9.4 40 7-46 3-43 (230)
457 2d2i_A Glyceraldehyde 3-phosph 95.6 0.024 8.2E-07 50.4 6.9 68 5-72 2-102 (380)
458 4e4t_A Phosphoribosylaminoimid 95.6 0.021 7.1E-07 51.9 6.7 65 4-68 34-103 (419)
459 3ay3_A NAD-dependent epimerase 95.6 0.0013 4.4E-08 55.7 -1.3 35 5-39 2-37 (267)
460 3v76_A Flavoprotein; structura 95.6 0.0099 3.4E-07 54.0 4.5 39 2-40 24-62 (417)
461 2hcy_A Alcohol dehydrogenase 1 95.6 0.045 1.5E-06 48.2 8.7 44 6-49 171-215 (347)
462 1hdc_A 3-alpha, 20 beta-hydrox 95.6 0.043 1.5E-06 45.9 8.2 43 4-46 4-47 (254)
463 3rft_A Uronate dehydrogenase; 95.6 0.0048 1.6E-07 52.3 2.2 35 6-40 4-39 (267)
464 2o7s_A DHQ-SDH PR, bifunctiona 95.5 0.011 3.8E-07 55.3 4.7 41 6-46 365-405 (523)
465 3d3w_A L-xylulose reductase; u 95.5 0.03 1E-06 46.4 7.0 41 6-46 8-49 (244)
466 1oc2_A DTDP-glucose 4,6-dehydr 95.5 0.012 4.1E-07 51.6 4.8 33 6-38 5-40 (348)
467 4b4u_A Bifunctional protein fo 95.5 0.059 2E-06 46.1 8.7 75 5-105 179-254 (303)
468 4ej6_A Putative zinc-binding d 95.5 0.045 1.5E-06 48.7 8.5 44 6-49 184-228 (370)
469 2ehd_A Oxidoreductase, oxidore 95.5 0.022 7.5E-07 47.0 6.0 46 1-46 1-47 (234)
470 3aoe_E Glutamate dehydrogenase 95.5 0.14 4.8E-06 46.1 11.6 103 4-119 217-334 (419)
471 3aog_A Glutamate dehydrogenase 95.5 0.13 4.4E-06 46.6 11.3 69 4-72 234-321 (440)
472 2hun_A 336AA long hypothetical 95.5 0.013 4.5E-07 51.0 4.7 35 4-38 2-39 (336)
473 2x5j_O E4PDH, D-erythrose-4-ph 95.4 0.041 1.4E-06 48.3 7.7 69 5-73 2-104 (339)
474 3rp8_A Flavoprotein monooxygen 95.4 0.015 5E-07 52.4 5.1 35 5-39 23-57 (407)
475 3c96_A Flavin-containing monoo 95.4 0.014 4.6E-07 52.7 4.8 37 3-39 2-39 (410)
476 2cdc_A Glucose dehydrogenase g 95.4 0.021 7.3E-07 50.7 6.0 69 5-73 181-258 (366)
477 1pjq_A CYSG, siroheme synthase 95.4 0.03 1E-06 51.5 7.1 67 5-72 12-83 (457)
478 3dme_A Conserved exported prot 95.4 0.013 4.6E-07 51.5 4.7 34 5-38 4-37 (369)
479 2x3n_A Probable FAD-dependent 95.4 0.011 3.7E-07 53.1 4.0 34 6-39 7-40 (399)
480 2o23_A HADH2 protein; HSD17B10 95.4 0.039 1.3E-06 46.3 7.3 42 4-45 11-53 (265)
481 1cyd_A Carbonyl reductase; sho 95.4 0.036 1.2E-06 45.9 7.0 42 5-46 7-49 (244)
482 2q1w_A Putative nucleotide sug 95.4 0.012 4.1E-07 51.4 4.2 35 5-39 21-56 (333)
483 3ak4_A NADH-dependent quinucli 95.4 0.06 2.1E-06 45.2 8.4 41 6-46 13-54 (263)
484 7mdh_A Protein (malate dehydro 95.3 0.02 6.8E-07 50.9 5.3 64 5-68 32-115 (375)
485 1yo6_A Putative carbonyl reduc 95.3 0.037 1.2E-06 45.8 6.8 42 5-46 3-47 (250)
486 1vj0_A Alcohol dehydrogenase, 95.3 0.054 1.8E-06 48.4 8.3 44 6-49 197-241 (380)
487 1piw_A Hypothetical zinc-type 95.3 0.017 5.8E-07 51.2 5.0 66 6-71 181-253 (360)
488 2q1s_A Putative nucleotide sug 95.3 0.01 3.5E-07 52.9 3.5 66 5-70 32-108 (377)
489 1n2s_A DTDP-4-, DTDP-glucose o 95.3 0.011 3.6E-07 50.7 3.5 60 6-70 1-63 (299)
490 3atr_A Conserved archaeal prot 95.3 0.0081 2.8E-07 55.1 2.9 35 5-39 6-40 (453)
491 1hdg_O Holo-D-glyceraldehyde-3 95.3 0.047 1.6E-06 47.8 7.6 68 6-73 1-101 (332)
492 1pqw_A Polyketide synthase; ro 95.3 0.036 1.2E-06 44.4 6.5 43 6-48 40-83 (198)
493 3l6e_A Oxidoreductase, short-c 95.3 0.031 1.1E-06 46.3 6.2 40 6-45 4-44 (235)
494 3vh1_A Ubiquitin-like modifier 95.3 0.024 8.1E-07 53.3 6.0 33 5-37 327-360 (598)
495 1y8q_A Ubiquitin-like 1 activa 95.3 0.048 1.6E-06 48.1 7.7 33 5-37 36-69 (346)
496 3o38_A Short chain dehydrogena 95.3 0.028 9.7E-07 47.3 6.1 41 5-45 22-64 (266)
497 3tz6_A Aspartate-semialdehyde 95.3 0.0029 1E-07 55.7 -0.2 89 6-104 2-96 (344)
498 1iz0_A Quinone oxidoreductase; 95.3 0.028 9.5E-07 48.4 6.1 65 6-71 127-198 (302)
499 3tfo_A Putative 3-oxoacyl-(acy 95.3 0.03 1E-06 47.3 6.2 43 3-45 2-45 (264)
500 3fbs_A Oxidoreductase; structu 95.2 0.018 6.3E-07 48.9 4.8 34 5-38 2-35 (297)
No 1
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=100.00 E-value=6.7e-57 Score=395.53 Aligned_cols=293 Identities=43% Similarity=0.706 Sum_probs=276.8
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPNG 85 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~~ 85 (316)
+||||||+|.||.+||++|+++||+|++|||++++++.+.+.|++.++|+.|++++||+||+|+|++.+ +++|+....+
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~-v~~V~~~~~g 82 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQH-VEGLYLDDDG 82 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHH-HHHHHHSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHH-HHHHHhchhh
Confidence 589999999999999999999999999999999999999999999999999999999999999999988 9999988777
Q ss_pred cccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHHHHHHHH
Q 021213 86 LLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAK 165 (316)
Q Consensus 86 ~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~v~ 165 (316)
+++. ..+++++||+||++|.+++++++.+.+++ ..|+|+|++|++..+..|++++|+||+++.+++++
T Consensus 83 ~~~~--~~~g~iiId~sT~~p~~~~~~a~~~~~~G----------~~~lDaPVsGg~~~A~~G~L~imvGG~~~~~~~~~ 150 (300)
T 3obb_A 83 LLAH--IAPGTLVLECSTIAPTSARKIHAAARERG----------LAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKAR 150 (300)
T ss_dssp STTS--CCC-CEEEECSCCCHHHHHHHHHHHHTTT----------CEEEECCEESCHHHHHHTCEEEEEESCHHHHHHHH
T ss_pred hhhc--CCCCCEEEECCCCCHHHHHHHHHHHHHcC----------CEEEecCCCCCHHHHHhCCEEEEEeCCHHHHHHHH
Confidence 7764 45778999999999999999999988743 79999999999999999999999999999999999
Q ss_pred HHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCccccccCCCCCCcccC
Q 021213 166 PLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEG 245 (316)
Q Consensus 166 ~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 245 (316)
++|+.+|++++|+|+.|+++.+|+++|.+.+.++.+++|++.++++.|+|+++++++++.+...+|....+.|.+.....
T Consensus 151 p~l~~~g~~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl~~~~~~s~~~~~~~p~~~~~~~ 230 (300)
T 3obb_A 151 PLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVMEN 230 (300)
T ss_dssp HHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTSTT
T ss_pred HHHHHhCCCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhCcccchHHHhhccccchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888888777766
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhc
Q 021213 246 VPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYG 311 (316)
Q Consensus 246 ~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~ 311 (316)
.+..++|.++|++..+.||++++.+++++.|+++|+.+.+.++|+++.+.|+|++|++++++.|.+
T Consensus 231 ~~~~~~~~~~f~~~l~~KDl~l~~~~A~~~g~~~p~~~~a~~~~~~a~~~G~g~~D~sal~~~~e~ 296 (300)
T 3obb_A 231 APASRDYSGGFMAQLMAKDLGLAQEAAQASASSTPMGSLALSLYRLLLKQGYAERDFSVVQKLFDP 296 (300)
T ss_dssp SGGGGTTCSSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHCT
T ss_pred ccccccCCccchHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhCCCCCcCHHHHHHHHHH
Confidence 777889999999999999999999999999999999999999999999999999999999998854
No 2
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=100.00 E-value=4.2e-53 Score=371.64 Aligned_cols=287 Identities=22% Similarity=0.350 Sum_probs=252.9
Q ss_pred CCCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcC
Q 021213 3 FFDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNG 82 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~ 82 (316)
.|++||||||+|+||.+||.+|+++||+|++|||++++++.+.+.|+..++|+.|+++++|+||+|+|++.+ +++++..
T Consensus 3 ~Ms~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~-~~~v~~~ 81 (297)
T 4gbj_A 3 AMSEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAA-VEELFSM 81 (297)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHH-HHHHSCH
T ss_pred CCCCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhh-HHHHHHH
Confidence 356799999999999999999999999999999999999999999999999999999999999999999876 7776642
Q ss_pred CCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHHHHH
Q 021213 83 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQ 162 (316)
Q Consensus 83 ~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~ 162 (316)
.+++. ..++.++||+||+.|.+.+++.+.+.+.+ ..|+++|++|++..+..+++++++||+++.++
T Consensus 82 --~~~~~--~~~~~iiid~sT~~p~~~~~~~~~~~~~g----------~~~ldapVsGg~~~a~~g~l~im~gG~~~~~~ 147 (297)
T 4gbj_A 82 --ELVEK--LGKDGVHVSMSTISPETSRQLAQVHEWYG----------AHYVGAPIFARPEAVRAKVGNICLSGNAGAKE 147 (297)
T ss_dssp --HHHHH--HCTTCEEEECSCCCHHHHHHHHHHHHHTT----------CEEEECCEECCHHHHHHTCCEEEEEECHHHHH
T ss_pred --HHHhh--cCCCeEEEECCCCChHHHHHHHHHHHhcC----------CceecCCcCCCccccccccceeecccchhHHH
Confidence 23322 23667999999999999999999887743 79999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCeEeeCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCccccccCCCCCC
Q 021213 163 AAKPLFLSMGKNTIYCGG-AGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPG 241 (316)
Q Consensus 163 ~v~~ll~~~g~~v~~~g~-~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 241 (316)
+++++|+.++++++++|+ .|+++.+|+++|.+.+.++.+++|++.++++.|+|+++++++++.+...||....+.+
T Consensus 148 ~~~~~l~~~g~~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~--- 224 (297)
T 4gbj_A 148 RIKPIVENFVKGVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSIYEMLTSTLFAAPIFQNYGK--- 224 (297)
T ss_dssp HHHHHHHTTCSEEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTTCSHHHHHHHH---
T ss_pred HHHHHHHHhhCCeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcccCchhhccCc---
Confidence 999999999999999984 8999999999999999999999999999999999999999999999888887654322
Q ss_pred cccCCCCCCCCCC-CcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhc
Q 021213 242 VMEGVPASRNYGG-GFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYG 311 (316)
Q Consensus 242 ~~~~~~~~~~~~~-~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~ 311 (316)
++..++|.+ +|++..+.||++++.+++++.|+++|+.+.+.++|+.+.++|+|++|++++++.+++
T Consensus 225 ----~~~~~~~~p~~f~~~l~~KDl~l~~~~A~~~g~~~p~~~~~~~~~~~a~~~G~g~~D~sal~~~~~~ 291 (297)
T 4gbj_A 225 ----LVASNTYEPVAFRFPLGLKDINLTLQTASDVNAPMPFADIIRNRFISGLAKGRENLDWGALALGASD 291 (297)
T ss_dssp ----HHHHTCCCSCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGGHHHHH
T ss_pred ----cccCCCCCCccchhHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 234678876 899999999999999999999999999999999999999999999999999998864
No 3
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=100.00 E-value=1.9e-47 Score=338.82 Aligned_cols=288 Identities=31% Similarity=0.433 Sum_probs=258.0
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
+|||+|||+|.||.++|.+|+++||+|++|||++++++.+.+.|+..++++++++++||+||+|+|++.+ +++++...+
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~-~~~v~~~~~ 99 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCA-ALSVVFDKG 99 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHH-HHHHHHSTT
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHH-HHHHHhCch
Confidence 3799999999999999999999999999999999999999999999999999999999999999998766 888883333
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHHHHHHH
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAA 164 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~v 164 (316)
++.+. ..+++++||+||+.|.+.+++.+.+.+.+ .+|+++|+++++..+..++++++++++++.++++
T Consensus 100 ~l~~~--l~~g~~vv~~st~~~~~~~~~~~~~~~~g----------~~~v~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~ 167 (310)
T 3doj_A 100 GVLEQ--ICEGKGYIDMSTVDAETSLKINEAITGKG----------GRFVEGPVSGSKKPAEDGQLIILAAGDKALFEES 167 (310)
T ss_dssp CGGGG--CCTTCEEEECSCCCHHHHHHHHHHHHHTT----------CEEEECCEECCHHHHHHTCEEEEEEECHHHHHHH
T ss_pred hhhhc--cCCCCEEEECCCCCHHHHHHHHHHHHHcC----------CEEEeCCCCCChhHHhcCCeEEEEcCCHHHHHHH
Confidence 33332 23677999999999999999998876632 7899999999999999999999999999999999
Q ss_pred HHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCccccccCCCCCCccc
Q 021213 165 KPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVME 244 (316)
Q Consensus 165 ~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 244 (316)
+++|+.+|++++++++.|.++++|+++|.+.+.++.+++|++.++++.|++++++.+++..+...+|....+. +
T Consensus 168 ~~ll~~~g~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~--~---- 241 (310)
T 3doj_A 168 IPAFDVLGKRSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDLGAMTNPMFKGKG--P---- 241 (310)
T ss_dssp HHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHSTTCCHHHHHHH--H----
T ss_pred HHHHHHhCCCEEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccHHHHHHh--h----
Confidence 9999999999999999999999999999999999999999999999999999999999998876666543221 1
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhcC
Q 021213 245 GVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGG 312 (316)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~ 312 (316)
++..++|.++|++.++.||++++.+++++.|+++|+++.++++|+.+.+.|+|++|++++++.+.+.
T Consensus 242 -~~~~~~~~~~f~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~ 308 (310)
T 3doj_A 242 -SMNKSSYPPAFPLKHQQKDMRLALALGDENAVSMPVAAAANEAFKKARSLGLGDLDFSAVIEAVKFS 308 (310)
T ss_dssp -HHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHHCC
T ss_pred -hhhcCCCCCCccHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHhc
Confidence 2346788999999999999999999999999999999999999999999999999999999987653
No 4
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=100.00 E-value=2.5e-46 Score=330.81 Aligned_cols=295 Identities=43% Similarity=0.696 Sum_probs=268.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
+|||+|||+|+||.+++..|.++||+|++|||++++++.+.+.|+..++++.++++++|+||+|+|++.+ ++.++...+
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~-~~~v~~~~~ 81 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQH-VEGLYLDDD 81 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHH-HHHHHHSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHH-HHHHHcCch
Confidence 3699999999999999999999999999999999999999999999999999999999999999998876 888887333
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHHHHHHH
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAA 164 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~v 164 (316)
++.+. ..+++++|++|+..|.+.+++.+.+.+.+ .+|+++|+++++.....++++++++++++.++++
T Consensus 82 ~~~~~--l~~~~~vi~~st~~~~~~~~l~~~~~~~g----------~~~~~~pv~~~~~~~~~g~l~~~~~g~~~~~~~~ 149 (302)
T 2h78_A 82 GLLAH--IAPGTLVLECSTIAPTSARKIHAAARERG----------LAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKA 149 (302)
T ss_dssp CGGGS--SCSSCEEEECSCCCHHHHHHHHHHHHHTT----------CCEEECCEESCHHHHHHTCEEEEEESCHHHHHHH
T ss_pred hHHhc--CCCCcEEEECCCCCHHHHHHHHHHHHHcC----------CEEEEEEccCChhhHhcCCceEEeCCCHHHHHHH
Confidence 33332 23567999999999999989988876532 6899999999998888899899999999999999
Q ss_pred HHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCccccccCCCCCCccc
Q 021213 165 KPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVME 244 (316)
Q Consensus 165 ~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 244 (316)
+++|+.+|++++++++.+.+.++|+++|.+.+.++.+++|++.++++.|++++++.+++..+...+|....+.+.|+...
T Consensus 150 ~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~ 229 (302)
T 2h78_A 150 RPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVME 229 (302)
T ss_dssp HHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTST
T ss_pred HHHHHHhCCCeEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHhCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999998888887777778888877
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhcC
Q 021213 245 GVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGG 312 (316)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~ 312 (316)
.++..++|.++|+++++.||+++++++++++|+++|+++.+.++++.+.+.|+|++|++++++.+.+.
T Consensus 230 ~~~~~~~~~~g~~~~~~~kD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~ 297 (302)
T 2h78_A 230 NAPASRDYSGGFMAQLMAKDLGLAQEAAQASASSTPMGSLALSLYRLLLKQGYAERDFSVVQKLFDPT 297 (302)
T ss_dssp TSGGGGTTCSSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHCTT
T ss_pred ccccCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHh
Confidence 78888999999999999999999999999999999999999999999999999999999999988653
No 5
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=4.4e-47 Score=335.57 Aligned_cols=289 Identities=27% Similarity=0.406 Sum_probs=253.9
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCC-cCCHHHHhhcCCEEEEeCCCChhhHHHHhcC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPT-KETPFEVAEASDVVITMLPSSSHQVLDVYNG 82 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~-~~~~~~~~~~adivi~~vp~~~~~~~~v~~~ 82 (316)
++|||+|||+|.||++++.+|+++||+|++|||++++++.+.+.|... ++++++++++||+||+|+|++.. ++.++..
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~-~~~v~~~ 84 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQ-VRQVLFG 84 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHH-HHHHHC-
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHH-HHHHHhC
Confidence 357999999999999999999999999999999999999999999887 88999999999999999998766 8888832
Q ss_pred CCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHHHHH
Q 021213 83 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQ 162 (316)
Q Consensus 83 ~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~ 162 (316)
.+++.+. ..+++++||+|++.|.+.+++.+.+.+. +..|+++|+++++..+..++++++++++++.++
T Consensus 85 ~~~l~~~--l~~g~ivv~~st~~~~~~~~~~~~~~~~----------g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~ 152 (303)
T 3g0o_A 85 EDGVAHL--MKPGSAVMVSSTISSADAQEIAAALTAL----------NLNMLDAPVSGGAVKAAQGEMTVMASGSEAAFT 152 (303)
T ss_dssp -CCCGGG--SCTTCEEEECSCCCHHHHHHHHHHHHTT----------TCEEEECCEESCHHHHHTTCEEEEEECCHHHHH
T ss_pred hhhHHhh--CCCCCEEEecCCCCHHHHHHHHHHHHHc----------CCeEEeCCCCCChhhhhcCCeEEEeCCCHHHHH
Confidence 2233322 2366799999999999999998887653 278999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCeEeeCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCccccccCCCCCC
Q 021213 163 AAKPLFLSMGKNTIYCGG-AGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPG 241 (316)
Q Consensus 163 ~v~~ll~~~g~~v~~~g~-~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 241 (316)
+++++|+.+|++++++++ .|.++++|+++|.+.+.++.+++|++.++++.|++++++.+++..+...+|....+. +.
T Consensus 153 ~~~~ll~~~g~~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~--~~ 230 (303)
T 3g0o_A 153 RLKPVLDAVASNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDVVTHAAGNSWMFENRM--QH 230 (303)
T ss_dssp HHHHHHHHHEEEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCHHHHHHH--HH
T ss_pred HHHHHHHHHCCCEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccCCHHHHhhh--HH
Confidence 999999999999999998 899999999999999999999999999999999999999999999877776644321 22
Q ss_pred cccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhcC
Q 021213 242 VMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGG 312 (316)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~ 312 (316)
+..++|.++|++.++.||+++++++++++|+++|+++.++++|+++.+.|+|++|++++++.+..+
T Consensus 231 -----~~~~~~~~~~~~~~~~kD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~ 296 (303)
T 3g0o_A 231 -----VVDGDYTPRSAVDIFVKDLGLVADTAKALRFPLPLASTALNMFTSASNAGYGKEDDSAVIKIFSGE 296 (303)
T ss_dssp -----HHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTTTTSBGGGGGGGC---
T ss_pred -----HhcCCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHHhc
Confidence 335688899999999999999999999999999999999999999999999999999999976543
No 6
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=100.00 E-value=4.8e-47 Score=332.95 Aligned_cols=285 Identities=31% Similarity=0.473 Sum_probs=255.9
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPNG 85 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~~ 85 (316)
|||+|||+|+||.+++.+|+++||+|++|||++++.+.+.+.|+..++++++++++||+||+|+|++.+ +++++...++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~-~~~v~~~~~~ 80 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAA-AREVCFGANG 80 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHH-HHHHHHSTTC
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHH-HHHHHcCchh
Confidence 589999999999999999999999999999999999999998999999999999999999999998766 8888843333
Q ss_pred cccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHHHHHHHH
Q 021213 86 LLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAK 165 (316)
Q Consensus 86 ~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~v~ 165 (316)
+.+. ..+++++||+|++.|.+.+++.+.+.+.+ .+|+++|+++++..+..++++++++++++.+++++
T Consensus 81 l~~~--l~~g~~vv~~st~~~~~~~~~~~~~~~~g----------~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~ 148 (287)
T 3pdu_A 81 VLEG--IGGGRGYIDMSTVDDETSTAIGAAVTARG----------GRFLEAPVSGTKKPAEDGTLIILAAGDQSLFTDAG 148 (287)
T ss_dssp GGGT--CCTTCEEEECSCCCHHHHHHHHHHHHHTT----------CEEEECCEECCHHHHHHTCEEEEEEECHHHHHHTH
T ss_pred hhhc--ccCCCEEEECCCCCHHHHHHHHHHHHHcC----------CEEEECCccCCHHHHhcCCEEEEEeCCHHHHHHHH
Confidence 3332 23667999999999999999988876532 78999999999999999999999999999999999
Q ss_pred HHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCccccccCCCCCCcccC
Q 021213 166 PLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEG 245 (316)
Q Consensus 166 ~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 245 (316)
++|+.+|++++++++.|.++++|+++|.+.+.++.+++|++.++++.|++++++.+++..+...+|....+. +
T Consensus 149 ~ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~--~----- 221 (287)
T 3pdu_A 149 PAFAALGKKCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDAGAMANPMFKGKG--Q----- 221 (287)
T ss_dssp HHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHHHHH--H-----
T ss_pred HHHHHhCCCEEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccccChHHHhhc--c-----
Confidence 999999999999999999999999999999999999999999999999999999999999877776544322 1
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHh
Q 021213 246 VPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYY 310 (316)
Q Consensus 246 ~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~ 310 (316)
++..++|.++|++.++.||++.+.+++++.|+++|+++.++++++++.+.|+|++|++++++.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~~~~d~~~~~~~~~ 286 (287)
T 3pdu_A 222 MLLSGEFPTSFPLKHMQKDLRLAVELGDRLGQPLHGAATANESFKRARAAGHADEDFAAVFRVLE 286 (287)
T ss_dssp HHHHTCCCCSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHC
T ss_pred ccccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCcCCHHHHHHHHh
Confidence 23457888999999999999999999999999999999999999999999999999999999874
No 7
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=100.00 E-value=1e-46 Score=335.34 Aligned_cols=287 Identities=26% Similarity=0.423 Sum_probs=257.2
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
+|||+|||+|.||.+++..|+++||+|++|||++++++.+.+.|+..+++++++++++|+||+|+|++.. ++.++...
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~-~~~v~~~~- 108 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAV-VQDVLFAQ- 108 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHH-HHHHHTTT-
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHH-HHHHHcch-
Confidence 4699999999999999999999999999999999999999999999999999999999999999998766 88888622
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHHHHHHH
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAA 164 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~v 164 (316)
++++. ..+++++|++||+.|.+.+++.+.+.+.+ .+|+++|+++++..+..+++++++|++++.++++
T Consensus 109 ~~~~~--l~~~~~vi~~st~~~~~~~~~~~~~~~~g----------~~~~~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~ 176 (320)
T 4dll_A 109 GVAAA--MKPGSLFLDMASITPREARDHAARLGALG----------IAHLDTPVSGGTVGAEQGTLVIMAGGKPADFERS 176 (320)
T ss_dssp CHHHH--CCTTCEEEECSCCCHHHHHHHHHHHHHTT----------CEEEECCEECHHHHHHHTCEEEEEESCHHHHHHH
T ss_pred hHHhh--CCCCCEEEecCCCCHHHHHHHHHHHHHcC----------CEEEeCCCcCCHhHHhcCCeeEEeCCCHHHHHHH
Confidence 23322 23667999999999999999988877632 7899999999999899999999999999999999
Q ss_pred HHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCccccccCCCCCCccc
Q 021213 165 KPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVME 244 (316)
Q Consensus 165 ~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 244 (316)
+++|+.+ ++++++++.|.++++|+++|.+.+..+.+++|++.++++.|++++++.++++.+.+.+|....+.+
T Consensus 177 ~~ll~~~-~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~~------ 249 (320)
T 4dll_A 177 LPLLKVF-GRATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKEAITGGFADSRVLQLHGQ------ 249 (320)
T ss_dssp HHHHHHH-EEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHTTSTTCBHHHHTHHH------
T ss_pred HHHHHhc-CCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcccccCHHHHHhhh------
Confidence 9999999 889999999999999999999999999999999999999999999999999988777776543222
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhcCC
Q 021213 245 GVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGGK 313 (316)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~~ 313 (316)
++..++|.++|++.++.||++++.+++++.|+++|+++++.++|+.+.+.|+|++|++++++.+.+..
T Consensus 250 -~~l~~~~~~gf~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~~ 317 (320)
T 4dll_A 250 -RMVERDFAPRARLSIQLKDMRNALATAQEIGFDAPITGLFEQLYAEGVEHGLTDLDQSGLFVELASRN 317 (320)
T ss_dssp -HHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTTTTTSBGGGHHHHHHHC-
T ss_pred -hhccCCCCCcccHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHhc
Confidence 34567899999999999999999999999999999999999999999999999999999999887643
No 8
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=100.00 E-value=1.4e-46 Score=330.07 Aligned_cols=286 Identities=33% Similarity=0.484 Sum_probs=255.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.|||+|||+|.||.+++.+|+++||+|++|||++++.+.+.+.|+..+++++++++++|+||+|+|++.+ +++++...+
T Consensus 1 s~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~-~~~v~~~~~ 79 (287)
T 3pef_A 1 SQKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAA-AEEVCFGKH 79 (287)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHH-HHHHHHSTT
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHH-HHHHHcCcc
Confidence 3799999999999999999999999999999999999999999999999999999999999999998766 888883323
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHHHHHHH
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAA 164 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~v 164 (316)
++.+. ..+++++|++|++.|.+.+++.+.+.+.+ .+|+++|+++++..+..++++++++++++.++++
T Consensus 80 ~l~~~--l~~~~~vi~~st~~~~~~~~~~~~~~~~g----------~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~ 147 (287)
T 3pef_A 80 GVLEG--IGEGRGYVDMSTVDPATSQRIGVAVVAKG----------GRFLEAPVSGSKKPAEDGTLIILAAGDRNLYDEA 147 (287)
T ss_dssp CHHHH--CCTTCEEEECSCCCHHHHHHHHHHHHHTT----------CEEEECCEECCHHHHHHTCEEEEEEECHHHHHHH
T ss_pred hHhhc--CCCCCEEEeCCCCCHHHHHHHHHHHHHhC----------CEEEECCCcCCHHHHhcCCEEEEEeCCHHHHHHH
Confidence 33322 23567999999999999999988876632 7899999999999999999999999999999999
Q ss_pred HHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCccccccCCCCCCccc
Q 021213 165 KPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVME 244 (316)
Q Consensus 165 ~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 244 (316)
+++|+.+|++++++++.|.++++|+++|.+.+.++.+++|++.++++.|++++++.+++..+...+|....+. +
T Consensus 148 ~~ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~--~---- 221 (287)
T 3pef_A 148 MPGFEKMGKKIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGAMANPMFALKG--G---- 221 (287)
T ss_dssp HHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHHHHH--H----
T ss_pred HHHHHHhCCCeEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccHHHHHHh--h----
Confidence 9999999999999999999999999999999999999999999999999999999999999877666544321 1
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHh
Q 021213 245 GVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYY 310 (316)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~ 310 (316)
++..++|.++|++.++.||++++.++++++|+++|+++.++++|+.+.+.|+|++|++++++.+.
T Consensus 222 -~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~ 286 (287)
T 3pef_A 222 -LIRDRNFAPAFPLKHMQKDLRLAVALGDRVGQPLVASAAANELFKGARAAGFGDEDFSAIFKTYE 286 (287)
T ss_dssp -HHHTTCCCCSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGGGGGC
T ss_pred -hhhcCCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHh
Confidence 23457888999999999999999999999999999999999999999999999999999998654
No 9
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=100.00 E-value=4.7e-44 Score=314.98 Aligned_cols=270 Identities=27% Similarity=0.347 Sum_probs=240.1
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
++|||+|||+|.||.+++.+|+++||+|++|||++++++.+.+.|+..+++++++++ +|+||+|+|++.+ +++++.++
T Consensus 14 ~~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~-~~~v~~~l 91 (296)
T 3qha_A 14 EQLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQ-VREVVGEL 91 (296)
T ss_dssp -CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHH-HHHHHHHH
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHH-HHHHHHHH
Confidence 357999999999999999999999999999999999999999999999999999999 9999999998766 88888654
Q ss_pred CCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHHHHHH
Q 021213 84 NGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQA 163 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~ 163 (316)
.+.+ .+++++||+||+.|.+.+++.+.+.+.+ .+|+++|+++++..+..++++++++++++.+++
T Consensus 92 ~~~l-----~~g~ivv~~st~~~~~~~~~~~~~~~~g----------~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~ 156 (296)
T 3qha_A 92 AGHA-----KPGTVIAIHSTISDTTAVELARDLKARD----------IHIVDAPVSGGAAAAARGELATMVGADREVYER 156 (296)
T ss_dssp HTTC-----CTTCEEEECSCCCHHHHHHHHHHHGGGT----------CEEEECCEESCHHHHHHTCEEEEEECCHHHHHH
T ss_pred HHhc-----CCCCEEEEeCCCCHHHHHHHHHHHHHcC----------CEEEeCCCcCCHHHHhcCCccEEecCCHHHHHH
Confidence 4333 3567999999999999999998886532 789999999999999999999999999999999
Q ss_pred HHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH------HHHHhhccCCccccccCC
Q 021213 164 AKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTL------TKILNSSSARCWSSDSYN 237 (316)
Q Consensus 164 v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~------~~~~~~~~~~s~~~~~~~ 237 (316)
++++|+.+|++++++++.|.++++|+++|.+.+..+.+++|++.++++.|++++++ .+++..+.+.||...
T Consensus 157 ~~~ll~~~g~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~i~~~~~~s~~~~--- 233 (296)
T 3qha_A 157 IKPAFKHWAAVVIHAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQALGRVVRHTDALTGGPGAIMVRD--- 233 (296)
T ss_dssp HHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCCGGGGCCCS---
T ss_pred HHHHHHHHcCCeEEcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcchHHHHhcCcccCHHhh---
Confidence 99999999999999999999999999999999999999999999999999999999 999888777665433
Q ss_pred CCCCcccCCCCCCCCCCCcch-----hhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCC
Q 021213 238 PVPGVMEGVPASRNYGGGFAS-----KLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSK 300 (316)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~-----~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~ 300 (316)
.+. +..+ |.++|.+ +++.||++++.++++++|+++|+++.++++|+.+.+.|++++
T Consensus 234 -~~~-----~~~~-~~~~f~~~~~~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~~~~ 294 (296)
T 3qha_A 234 -NMK-----DLEP-DNFLYQPFLHTRGLGEKDLSLALALGEAVSVDLPLARLAYEGLAAGLGVPHKEK 294 (296)
T ss_dssp -SCS-----CCCT-TSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTCCC---
T ss_pred -chh-----hhhc-CCCCCchhhhhhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCcccc
Confidence 222 3345 7889999 999999999999999999999999999999999999998544
No 10
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=100.00 E-value=1.7e-44 Score=319.13 Aligned_cols=283 Identities=16% Similarity=0.190 Sum_probs=243.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.|||+|||+|.||.+++.+|.++||+|++|||++++++.+.+.|+..++++.++++++|+||+|+|++.+ +++++.. .
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~-~~~v~~~-~ 86 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHA-THEVLGM-P 86 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHH-HHHHHTS-T
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHH-HHHHhcc-c
Confidence 4799999999999999999999999999999999999999988988889999999999999999998876 8888851 1
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHHHHHHH
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAA 164 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~v 164 (316)
.+ .. ..+++++||+||+.|.+.+++.+.+.+.+ .+|+++|++++++....+..+++++++++.++++
T Consensus 87 ~l-~~--~~~g~ivid~st~~~~~~~~l~~~~~~~g----------~~~vdapv~g~~~~~~~~~~~i~~gg~~~~~~~~ 153 (306)
T 3l6d_A 87 GV-AR--ALAHRTIVDYTTNAQDEGLALQGLVNQAG----------GHYVKGMIVAYPRNVGHRESHSIHTGDREAFEQH 153 (306)
T ss_dssp TH-HH--HTTTCEEEECCCCCTTHHHHHHHHHHHTT----------CEEEEEEEESCGGGTTCTTCEEEEEECHHHHHHH
T ss_pred ch-hh--ccCCCEEEECCCCCHHHHHHHHHHHHHcC----------CeEEecccccCcccccCCceEEEEcCCHHHHHHH
Confidence 22 21 23667999999999999999988876532 7899999999887777777789999999999999
Q ss_pred HHHHHhcCCCeEee--CC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhcc--CCccccccCCCC
Q 021213 165 KPLFLSMGKNTIYC--GG-AGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSS--ARCWSSDSYNPV 239 (316)
Q Consensus 165 ~~ll~~~g~~v~~~--g~-~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~--~~s~~~~~~~~~ 239 (316)
+++|+.+|.+++++ |+ .|+++.+| .+.+..+.+++|++.++++.|+|++++.+++..+. +.+|....+.+
T Consensus 154 ~~ll~~lg~~~~~~~~g~~~g~g~~~k----~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~~~~~~~~~s~~~~~~~~- 228 (306)
T 3l6d_A 154 RALLEGLAGHTVFLPWDEALAFATVLH----AHAFAAMVTFFEAVGAGDRFGLPVSKTARLLLETSRFFVADALEEAVR- 228 (306)
T ss_dssp HHHHHTTCSEEEECCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHhcCCEEEecCCCCccHHHHHH----HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhhhcccHHHHHHHH-
Confidence 99999998889999 86 79999998 44567789999999999999999999999998875 45665443221
Q ss_pred CCcccCCCCCCCCCCC-cchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhcCC
Q 021213 240 PGVMEGVPASRNYGGG-FASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGGK 313 (316)
Q Consensus 240 ~~~~~~~~~~~~~~~~-~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~~ 313 (316)
++..++|.++ |++..+.||++++.+.+++.|+++|+.+++.++|+.+.+.|+|++|++++++.+.+..
T Consensus 229 ------~~~~~~~~~~~~~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d~~a~~~~~~~~~ 297 (306)
T 3l6d_A 229 ------RLETQDFKGDQARLDVHADAFAHIAQSLHAQGVWTPVFDAVCQVVQRAAAMGYGDQDIAATTKSFAREQ 297 (306)
T ss_dssp ------HHHHTCCCTTSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTTTTSBGGGGGGGGC---
T ss_pred ------HHhcCCCCCCcccHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCCccCHHHHHHHHHhHH
Confidence 2345788875 6899999999999999999999999999999999999999999999999999776544
No 11
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=100.00 E-value=1.4e-42 Score=305.94 Aligned_cols=294 Identities=52% Similarity=0.857 Sum_probs=257.1
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPNG 85 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~~ 85 (316)
|||+|||+|.||.+++..|.++||+|++|||++++.+.+.+.|+..++++.++++++|+||+|+|.+.+ ++.++..+++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~-~~~v~~~~~~ 79 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSIN-AIEAYSGANG 79 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHH-HHHHHHSTTS
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHH-HHHHHhCchh
Confidence 589999999999999999999999999999999999999988888888999999999999999988776 8888887655
Q ss_pred cccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHHHHHHHH
Q 021213 86 LLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAK 165 (316)
Q Consensus 86 ~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~v~ 165 (316)
+++. ..+++++|++++..+.+.+.+.+.+.+. +..|+++|+.+++.....+...++++++++..++++
T Consensus 80 ~~~~--l~~~~~vv~~s~~~~~~~~~~~~~~~~~----------g~~~~~~p~~~g~~~a~~~~~~~~~~~~~~~~~~v~ 147 (296)
T 2gf2_A 80 ILKK--VKKGSLLIDSSTIDPAVSKELAKEVEKM----------GAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQ 147 (296)
T ss_dssp GGGT--CCTTCEEEECSCCCHHHHHHHHHHHHHT----------TCEEEECCEESHHHHHHHTCEEEEEESCGGGHHHHH
T ss_pred HHhc--CCCCCEEEECCCCCHHHHHHHHHHHHHc----------CCEEEEcCCCCChhHHhcCcEEEEeCCCHHHHHHHH
Confidence 4432 2356799999999998888887766542 268999999988777778888888999999999999
Q ss_pred HHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCccccccCCCCCCcccC
Q 021213 166 PLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEG 245 (316)
Q Consensus 166 ~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 245 (316)
++|+.+|.++++++..|.+.++|+++|.+.+..+.++.|++.++++.|++++++.+++..+.+.+|......+.+.++..
T Consensus 148 ~l~~~~g~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 227 (296)
T 2gf2_A 148 ELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDG 227 (296)
T ss_dssp HHHTTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHHHHHSCSSTTTCSS
T ss_pred HHHHHHcCCeEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhCcccCHHHHhcCCccccccc
Confidence 99999999888898899999999999998899999999999999999999999999999876666655444555666654
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhcC
Q 021213 246 VPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGG 312 (316)
Q Consensus 246 ~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~ 312 (316)
.+..++|.++|.++.+.||++.++++++++|+++|+++.++++++.+.+.|+|++|++++++.+.+.
T Consensus 228 s~~~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~ 294 (296)
T 2gf2_A 228 VPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLGSLAHQIYRMMCAKGYSKKDFSSVFQFLREE 294 (296)
T ss_dssp SGGGGTTCSSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTTCTTSBGGGHHHHHSCC
T ss_pred chhccCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHHhc
Confidence 5566788889999999999999999999999999999999999999999999999999999977544
No 12
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=100.00 E-value=3e-41 Score=297.90 Aligned_cols=285 Identities=37% Similarity=0.515 Sum_probs=246.4
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHh---
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVY--- 80 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~--- 80 (316)
|+|||+|||+|.||..++..|.+.||+|++|||++++.+.+.+.|+....++.++++++|+||+|+|++.+ ++.++
T Consensus 4 M~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~-~~~~~~~~ 82 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPH-VKEVALGE 82 (299)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHH-HHHHHHST
T ss_pred ccceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHH-HHHHHhCc
Confidence 34799999999999999999999999999999999999999888888888999999999999999997766 78887
Q ss_pred cCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHHH
Q 021213 81 NGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDA 160 (316)
Q Consensus 81 ~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~ 160 (316)
.++.+.+ .+++++|+++++.+.+.+.+.+.+.+. +.+|+++|+++++.....+..+++++++++.
T Consensus 83 ~~l~~~l-----~~~~~vv~~s~~~~~~~~~l~~~~~~~----------g~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~ 147 (299)
T 1vpd_A 83 NGIIEGA-----KPGTVLIDMSSIAPLASREISDALKAK----------GVEMLDAPVSGGEPKAIDGTLSVMVGGDKAI 147 (299)
T ss_dssp TCHHHHC-----CTTCEEEECSCCCHHHHHHHHHHHHTT----------TCEEEECCEESHHHHHHHTCEEEEEESCHHH
T ss_pred chHhhcC-----CCCCEEEECCCCCHHHHHHHHHHHHHc----------CCeEEEecCCCCHhHHhcCCEEEEeCCCHHH
Confidence 3333333 256799999999998888888877653 2688999999888777788888889999999
Q ss_pred HHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCccccccCCCCC
Q 021213 161 YQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVP 240 (316)
Q Consensus 161 ~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~ 240 (316)
+++++++|+.+|.+++++++.+.+.++|+++|.+.+.++.++.|++.++++.|++++++.+++..+...++..... .+
T Consensus 148 ~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~--~~ 225 (299)
T 1vpd_A 148 FDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAK--AP 225 (299)
T ss_dssp HHHHHHHHHTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCHHHHHH--HH
T ss_pred HHHHHHHHHHHcCCeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccCCCCHHHHHh--hh
Confidence 9999999999999899999999999999999999999999999999999999999999999998876555443211 12
Q ss_pred CcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhc
Q 021213 241 GVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYG 311 (316)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~ 311 (316)
.+ ..++|.++++++.+.||++.++++++++|+++|+++.++++++.+.+.|+|++|++++++.+.+
T Consensus 226 ~~-----l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~ 291 (299)
T 1vpd_A 226 MV-----MDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGHGNDDHSALACYYEK 291 (299)
T ss_dssp HH-----HTTCCCCSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSBGGGHHHHHHH
T ss_pred Hh-----hcCCCCCCCChHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHHH
Confidence 22 3456778889999999999999999999999999999999999999999999999999998753
No 13
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=100.00 E-value=3.8e-40 Score=291.06 Aligned_cols=288 Identities=35% Similarity=0.528 Sum_probs=246.5
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
++|||+|||+|.||..++..|.+.||+|++|||++++.+.+.+.|+...+++.++++++|+||+|+|.+.+ ++.++...
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~-~~~v~~~~ 81 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGI-VETVMNGP 81 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHH-HHHHHHST
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHH-HHHHHcCc
Confidence 35899999999999999999999999999999999999999888888888999999999999999998776 78888521
Q ss_pred CCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHHHHHH
Q 021213 84 NGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQA 163 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~ 163 (316)
+++.+. ..+++++|+++++.|.+.+.+.+.+.+.+ .+|+++|+.+++..+..+.++++++++++.+++
T Consensus 82 ~~l~~~--l~~~~~vv~~~~~~~~~~~~l~~~~~~~g----------~~~~~~p~~~~~~~a~~g~~~~~~~g~~~~~~~ 149 (301)
T 3cky_A 82 GGVLSA--CKAGTVIVDMSSVSPSSTLKMAKVAAEKG----------IDYVDAPVSGGTKGAEAGTLTIMVGASEAVFEK 149 (301)
T ss_dssp TCHHHH--SCTTCEEEECCCCCHHHHHHHHHHHHHTT----------CEEEECCEESHHHHHHHTCEEEEEESCHHHHHH
T ss_pred chHhhc--CCCCCEEEECCCCCHHHHHHHHHHHHHcC----------CeEEEccCCCCHHHHHcCCeEEEECCCHHHHHH
Confidence 122221 22567999999999888888888776532 678899998887777778878888899999999
Q ss_pred HHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCccccccCCCCC-Cc
Q 021213 164 AKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVP-GV 242 (316)
Q Consensus 164 v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~-~~ 242 (316)
++++|+.+|.+++++++.|.+.+.|+++|.+...++.++.|++.++++.|++++++.+++..+...++..... .+ .
T Consensus 150 v~~ll~~~g~~~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~- 226 (301)
T 3cky_A 150 IQPVLSVIGKDIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGLKPETMQEIIGKSSGRSYAMEAK--MEKF- 226 (301)
T ss_dssp HHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHHHHHH--CCCC-
T ss_pred HHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHh--hhhh-
Confidence 9999999999888899999999999999999999999999999999999999999999998876555433211 12 2
Q ss_pred ccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhc
Q 021213 243 MEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYG 311 (316)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~ 311 (316)
+..++|.++++++.+.||++.++++++++|+++|++++++++++++.+.|+|++|++++++.+.+
T Consensus 227 ----~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~ 291 (301)
T 3cky_A 227 ----IMSGDFAGGFAMDLQHKDLGLALEAGKEGNVPLPMTAMATQIFEGGRAMGLGREDMSAVIKVWEQ 291 (301)
T ss_dssp ----CCTCCCSSSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHHH
T ss_pred ----hhcCCCCCCccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHHH
Confidence 23567778899999999999999999999999999999999999999999999999999997753
No 14
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.7e-41 Score=299.67 Aligned_cols=276 Identities=16% Similarity=0.252 Sum_probs=226.8
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCC-CeEEEEeCCh-------hHHHHHHhCCCCCcC-CHHHHhhcCCEEEEeCCCChh
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAG-YKMAVHDVNC-------NVMKMFSDMGVPTKE-TPFEVAEASDVVITMLPSSSH 74 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g-~~V~~~~r~~-------~~~~~l~~~g~~~~~-~~~~~~~~adivi~~vp~~~~ 74 (316)
|+|||+|||+|+||++++.+|+++| |+|++|||++ +..+.+.+.|+ ++ ++.+++++||+||+|||++..
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~--~~~s~~e~~~~aDvVi~avp~~~~ 100 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV--EPLDDVAGIACADVVLSLVVGAAT 100 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC--EEESSGGGGGGCSEEEECCCGGGH
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC--CCCCHHHHHhcCCEEEEecCCHHH
Confidence 4589999999999999999999999 9999999998 56667777787 66 889999999999999998774
Q ss_pred hHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEe
Q 021213 75 QVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMV 154 (316)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~ 154 (316)
.+++..+.+.+ .+++++||+||+.|.+.+++.+.+.+. +..|+++|++|+ .....+.+++++
T Consensus 101 --~~~~~~i~~~l-----~~~~ivv~~st~~p~~~~~~~~~l~~~----------g~~~~d~pv~g~-~~a~~g~l~i~v 162 (317)
T 4ezb_A 101 --KAVAASAAPHL-----SDEAVFIDLNSVGPDTKALAAGAIATG----------KGSFVEGAVMAR-VPPYAEKVPILV 162 (317)
T ss_dssp --HHHHHHHGGGC-----CTTCEEEECCSCCHHHHHHHHHHHHTS----------SCEEEEEEECSC-STTTGGGSEEEE
T ss_pred --HHHHHHHHhhc-----CCCCEEEECCCCCHHHHHHHHHHHHHc----------CCeEEeccCCCC-chhhcCCEEEEE
Confidence 44444443333 356799999999999999999888753 268999999985 445567788999
Q ss_pred cCCHHHHHHHHHHHHhcCCCeEeeCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhcc-CCccc
Q 021213 155 GGSEDAYQAAKPLFLSMGKNTIYCGG-AGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSS-ARCWS 232 (316)
Q Consensus 155 ~~~~~~~~~v~~ll~~~g~~v~~~g~-~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~-~~s~~ 232 (316)
+++.+ ++++++|+.+|++++++++ .|.++++|+++|.+.+..+.+++|++.++++.|++++. ++.+..+. ..+|.
T Consensus 163 gg~~~--~~~~~ll~~~g~~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gid~~~-~~~l~~~~~~~~~~ 239 (317)
T 4ezb_A 163 AGRRA--VEVAERLNALGMNLEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAGVTERI-LDSVQETFPGLDWR 239 (317)
T ss_dssp ESTTH--HHHHHHHHTTTCEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH-HHHHHHHSTTSCHH
T ss_pred eCChH--HHHHHHHHHhCCCeEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-HHHHHhcCccccHH
Confidence 99877 8999999999999999998 89999999999999999999999999999999999964 45544433 22221
Q ss_pred cccCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHH----HHHHHHcCCC-CCcHHHHHH
Q 021213 233 SDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDI----YAKLCENGHD-SKDFSCVFQ 307 (316)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~----~~~~~~~g~g-~~d~~~~~~ 307 (316)
.+ .+ ++..++|.++|. +.||++.+.+++++.|+++|+++++.++ ++++.+.|++ ++||+++++
T Consensus 240 --~~--~~-----~~~~~~~~~g~~---~~KDl~~~~~~a~~~g~~~pl~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~ 307 (317)
T 4ezb_A 240 --DV--AD-----YYLSRTFEHGAR---RVTEMTEAAETIESFGLNAPMSRAACETIAAAHAAMKDQGLSVNDGYRGFVP 307 (317)
T ss_dssp --HH--HH-----HHHHHHHHHHHH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHTTSSCCTTSHHHHHHH
T ss_pred --Hh--hh-----hhhcCCCCCCcc---hHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHH
Confidence 11 11 223456666665 5899999999999999999999999999 8888889997 999999999
Q ss_pred HHhcCCC
Q 021213 308 HYYGGKD 314 (316)
Q Consensus 308 ~~~~~~~ 314 (316)
.+....+
T Consensus 308 ~~~~~~~ 314 (317)
T 4ezb_A 308 VLARRLA 314 (317)
T ss_dssp HHHHHC-
T ss_pred HHHhhcc
Confidence 9875443
No 15
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=100.00 E-value=4.3e-40 Score=292.67 Aligned_cols=286 Identities=29% Similarity=0.464 Sum_probs=246.9
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.|||+|||+|.||..++..|.+.|++|++|||++++.+.+.+.|+....++.++++++|+||+|+|++.. ++.++..+.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~-~~~v~~~~~ 108 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKA-AKDLVLGPS 108 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHH-HHHHHHSTT
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHH-HHHHHcCch
Confidence 4799999999999999999999999999999999999989888888888999999999999999997766 888887665
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHHHHHHH
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAA 164 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~v 164 (316)
++++. ..+++++|++++..+.+.+.+.+.+...+ ..|++.|+++++.....+...++++++++.++++
T Consensus 109 ~~~~~--l~~~~~vv~~s~~~~~~~~~l~~~~~~~~----------~~~v~~p~~g~~~~~~~g~~~~~~~g~~~~~~~v 176 (316)
T 2uyy_A 109 GVLQG--IRPGKCYVDMSTVDADTVTELAQVIVSRG----------GRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDC 176 (316)
T ss_dssp CGGGG--CCTTCEEEECSCCCHHHHHHHHHHHHHTT----------CEEEECCEESCHHHHHHTCEEEEEEECHHHHHHT
T ss_pred hHhhc--CCCCCEEEECCCCCHHHHHHHHHHHHHcC----------CEEEEcCccCChhHHhhCCEEEEeCCCHHHHHHH
Confidence 43332 23567999999999988888888775422 5788999998888888888778888899999999
Q ss_pred HHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCccccccCCCCCCccc
Q 021213 165 KPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVME 244 (316)
Q Consensus 165 ~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 244 (316)
+++|+.+|.+++++++.+.+.+.|++.|.+.+....++.|++.++++.|++++++.+++..+...++..... .+.+
T Consensus 177 ~~ll~~~g~~~~~~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~~~~~~~~~~~s~~~~~~--~~~~-- 252 (316)
T 2uyy_A 177 SSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASIFLDQK--CQNI-- 252 (316)
T ss_dssp HHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHHHH--HHHH--
T ss_pred HHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHh--hHHh--
Confidence 999999999888998899999999999999999999999999999999999999999998876555433211 1222
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHh
Q 021213 245 GVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYY 310 (316)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~ 310 (316)
..++|.++++++.+.||++.+++++++.|+++|++++++++++++.+.|+|++|++++++.++
T Consensus 253 ---l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~v~~~~~~a~~~g~g~~d~~~~~~~~~ 315 (316)
T 2uyy_A 253 ---LQGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYRAYI 315 (316)
T ss_dssp ---HHTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGGGGTC
T ss_pred ---hcCCCCCCCcHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHh
Confidence 235677889999999999999999999999999999999999999999999999999988653
No 16
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=100.00 E-value=7.1e-40 Score=288.54 Aligned_cols=282 Identities=33% Similarity=0.498 Sum_probs=245.4
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhc---C
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYN---G 82 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~---~ 82 (316)
|||+|||+|.||..++..|.+.||+|++|| ++++.+.+.+.|+....++.++++++|+||+|+|.+.+ ++.++. .
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~-~~~v~~~~~~ 81 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQ-VEDVLFGEHG 81 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHH-HHHHHHSTTS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHH-HHHHHhCchh
Confidence 699999999999999999999999999999 99998888888888888999999999999999998876 788886 4
Q ss_pred CCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHHHHH
Q 021213 83 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQ 162 (316)
Q Consensus 83 ~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~ 162 (316)
+.+.+ .+++++|+++++.|.+.+.+.+.+.+. +.+|++.|+.+++.....+.++++++++++.++
T Consensus 82 l~~~l-----~~~~~vv~~s~~~~~~~~~l~~~~~~~----------g~~~~~~p~~~~~~~a~~g~~~~~~~~~~~~~~ 146 (295)
T 1yb4_A 82 CAKTS-----LQGKTIVDMSSISPIETKRFAQRVNEM----------GADYLDAPVSGGEIGAREGTLSIMVGGEQKVFD 146 (295)
T ss_dssp STTSC-----CTTEEEEECSCCCHHHHHHHHHHHHTT----------TEEEEECCEESHHHHHHHTCEEEEEESCHHHHH
T ss_pred HhhcC-----CCCCEEEECCCCCHHHHHHHHHHHHHc----------CCeEEEccCCCCHHHHHcCCeEEEECCCHHHHH
Confidence 43333 356799999999988888888877652 267889999988777777887788899999999
Q ss_pred HHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCccccccCCCCCCc
Q 021213 163 AAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGV 242 (316)
Q Consensus 163 ~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 242 (316)
+++++|+.+|.+++++++.+.+.+.|+++|.+.+.++.++.|++.++++.|++++++.+++..+...++.... ..+
T Consensus 147 ~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~--~~~-- 222 (295)
T 1yb4_A 147 RVKPLFDILGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQALMGGFASSRILEV--HGE-- 222 (295)
T ss_dssp HHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTSSSSCBHHHHH--HHH--
T ss_pred HHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHH--hhH--
Confidence 9999999999988899999999999999999999999999999999999999999999999887755543221 111
Q ss_pred ccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhc
Q 021213 243 MEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYG 311 (316)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~ 311 (316)
.+..++|.+++++..+.||++.+++.+++.|+++|++++++++++++.+.|+|++|++++++.+.+
T Consensus 223 ---~~~~~~~~~g~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~ 288 (295)
T 1yb4_A 223 ---RMINRTFEPGFKIALHQKDLNLALQSAKALALNLPNTATCQELFNTCAANGGSQLDHSAMVQALEL 288 (295)
T ss_dssp ---HHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHHH
T ss_pred ---HHhcCCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHHH
Confidence 123467888999999999999999999999999999999999999999999999999999998753
No 17
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=100.00 E-value=1.1e-39 Score=289.02 Aligned_cols=265 Identities=21% Similarity=0.249 Sum_probs=221.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCC--hhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhc
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVN--CNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYN 81 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~--~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~ 81 (316)
+|||+|||+|.||.+++.+|+++|| +|++|||+ +++.+.+.+.|+..++++.+++++||+||+|||++.. .+++.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~--~~~~~ 101 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQAA--LEVAQ 101 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTTH--HHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchhH--HHHHH
Confidence 4799999999999999999999999 99999997 5788888889999899999999999999999998874 45665
Q ss_pred CCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHHHH
Q 021213 82 GPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAY 161 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~ 161 (316)
++.+.+ .+++++||+||+.|.+.+.+.+.+.+.. . +.+|+++|++++.... .+.++++++++.+
T Consensus 102 ~l~~~l-----~~~~ivvd~st~~~~~~~~~~~~~~~~~----~----g~~~vd~pv~g~~~~~-~g~l~i~vgg~~~-- 165 (312)
T 3qsg_A 102 QAGPHL-----CEGALYADFTSCSPAVKRAIGDVISRHR----P----SAQYAAVAVMSAVKPH-GHRVPLVVDGDGA-- 165 (312)
T ss_dssp HHGGGC-----CTTCEEEECCCCCHHHHHHHHHHHHHHC----T----TCEEEEEEECSCSTTT-GGGSEEEEESTTH--
T ss_pred hhHhhc-----CCCCEEEEcCCCCHHHHHHHHHHHHhhc----C----CCeEEeccccCCchhh-cCCEEEEecCChH--
Confidence 444433 2567999999999999999988876531 1 2789999999866544 6778899998877
Q ss_pred HHHHHHHHhcCCCeEeeCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCccccccCCCCC
Q 021213 162 QAAKPLFLSMGKNTIYCGG-AGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVP 240 (316)
Q Consensus 162 ~~v~~ll~~~g~~v~~~g~-~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~ 240 (316)
++++++|+.+|++++++++ .|+++++|+++|.+.+..+.+++|++.++++.|+++ ++++.+..+.. ++....+. +
T Consensus 166 ~~~~~ll~~~g~~~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~-~~~~~l~~~~~-~~~~~~~~--~ 241 (312)
T 3qsg_A 166 RRFQAAFTLYGCRIEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAAAEKMGLAD-RVLASLDASFP-EHHLRDLA--L 241 (312)
T ss_dssp HHHHHHHHTTTCEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH-HHHHHHHHHSG-GGTHHHHH--H
T ss_pred HHHHHHHHHhCCCeEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHHHHHHhcCC-chhHHHhh--h
Confidence 8999999999999999998 899999999999999999999999999999999999 57777776542 33221111 1
Q ss_pred CcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCC
Q 021213 241 GVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDS 299 (316)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~ 299 (316)
++..++|.++|++ .||++.+.+++++.|+++|+++++.++|+++.+.|+++
T Consensus 242 -----~~~~~~~~~g~~~---~KDl~~~~~~a~~~g~~~pl~~~~~~~~~~~~~~g~~~ 292 (312)
T 3qsg_A 242 -----YLVERNLEHADRR---AHELGEVAATLCSVGVEPLVAEAGYRRLTRVAQVRAAL 292 (312)
T ss_dssp -----HHHHHHHHHHHHH---HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred -----HhhcCCCCcccch---HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHhcCCcc
Confidence 2334567777764 79999999999999999999999999999999987765
No 18
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=100.00 E-value=3.9e-39 Score=282.96 Aligned_cols=280 Identities=28% Similarity=0.422 Sum_probs=240.0
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPNG 85 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~~ 85 (316)
|||+|||+|.||..++..|.+ ||+|++|||++++.+.+.+.|+..++ +.++++++|+||+|+|++.+ ++.++.++.+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~~~-~~~v~~~l~~ 78 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPTTRE-VYEVAEALYP 78 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSSHHH-HHHHHHHHTT
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCChHH-HHHHHHHHHh
Confidence 589999999999999999999 99999999999999888877777666 77888899999999998765 7777755443
Q ss_pred cccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHHHHHHHH
Q 021213 86 LLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAK 165 (316)
Q Consensus 86 ~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~v~ 165 (316)
.+ .++++++++|+..+.+.+.+.+.+.+.+ .+|++.|+++++.....+..+++++++++.+++++
T Consensus 79 ~l-----~~~~~vv~~s~~~~~~~~~l~~~~~~~g----------~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 143 (289)
T 2cvz_A 79 YL-----REGTYWVDATSGEPEASRRLAERLREKG----------VTYLDAPVSGGTSGAEAGTLTVMLGGPEEAVERVR 143 (289)
T ss_dssp TC-----CTTEEEEECSCCCHHHHHHHHHHHHTTT----------EEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHG
T ss_pred hC-----CCCCEEEECCCCCHHHHHHHHHHHHHcC----------CEEEEecCCCChhHHhhCCeEEEECCCHHHHHHHH
Confidence 33 2567999999999888888888776532 67888898887777778887888889999999999
Q ss_pred HHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCccccccCCCCC-Cccc
Q 021213 166 PLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVP-GVME 244 (316)
Q Consensus 166 ~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~-~~~~ 244 (316)
++| .+|.+++++++.+.+.++|++.|.+.+.++.++.|++.++++.|++++++.+++..+...++..... .+ .
T Consensus 144 ~ll-~~g~~~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~--~~~~--- 217 (289)
T 2cvz_A 144 PFL-AYAKKVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVINASSGRSNATENL--IPQR--- 217 (289)
T ss_dssp GGC-TTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCBHHHHHT--HHHH---
T ss_pred HHH-hhcCCeEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHHHccCCCCHHHHHh--ccch---
Confidence 999 9999888999889999999999999999999999999999999999999999998876554332211 11 1
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhc
Q 021213 245 GVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYG 311 (316)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~ 311 (316)
+..+++.++++++.+.||++.++++++++|+++|++++++++++++.+.|+|++|++++++.+.+
T Consensus 218 --~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~v~~~~~~a~~~g~~~~d~~~~~~~~~~ 282 (289)
T 2cvz_A 218 --VLTRAFPKTFALGLLVKDLGIAMGVLDGEKAPSPLLRLAREVYEMAKRELGPDADHVEALRLLER 282 (289)
T ss_dssp --TTTSCCCCSSBHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHCTTSBGGGGHHHHHH
T ss_pred --hhcCCCCCCcChHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHHH
Confidence 23457778899999999999999999999999999999999999999999999999999998753
No 19
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=100.00 E-value=4.4e-36 Score=269.16 Aligned_cols=285 Identities=24% Similarity=0.374 Sum_probs=224.0
Q ss_pred CCCCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcC---CEEEEeCCCChhhHHH
Q 021213 2 LFFDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEAS---DVVITMLPSSSHQVLD 78 (316)
Q Consensus 2 ~~~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~a---divi~~vp~~~~~~~~ 78 (316)
||.+|||+|||+|.||.++|.+|+++||+|++|||++++++.+.+.|+..+++++++++++ |+||+|||++ . +++
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~-v~~ 96 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-V-VDS 96 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-G-HHH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-H-HHH
Confidence 3445899999999999999999999999999999999999999999999999999999988 9999999988 4 899
Q ss_pred HhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCH
Q 021213 79 VYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSE 158 (316)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~ 158 (316)
++..+.+.++ ++.+|||+|++.|.+.+++.+.+...+ .+|+++|++|++..+..|+ ++++|+++
T Consensus 97 vl~~l~~~l~-----~g~iiId~st~~~~~~~~~~~~l~~~g----------~~~vdapVsGg~~~a~~G~-~im~GG~~ 160 (358)
T 4e21_A 97 MLQRMTPLLA-----ANDIVIDGGNSHYQDDIRRADQMRAQG----------ITYVDVGTSGGIFGLERGY-CLMIGGEK 160 (358)
T ss_dssp HHHHHGGGCC-----TTCEEEECSSCCHHHHHHHHHHHHTTT----------CEEEEEEEECGGGHHHHCC-EEEEESCH
T ss_pred HHHHHHhhCC-----CCCEEEeCCCCChHHHHHHHHHHHHCC----------CEEEeCCCCCCHHHHhcCC-eeeecCCH
Confidence 8876554442 567999999999999999988876532 7899999999999999998 89999999
Q ss_pred HHHHHHHHHHHhcC--------------------CCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------
Q 021213 159 DAYQAAKPLFLSMG--------------------KNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSL------ 212 (316)
Q Consensus 159 ~~~~~v~~ll~~~g--------------------~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~------ 212 (316)
+.+++++++|+.++ ++++++|+.|+++.+|+++|.+.+..+.+++|++.++++.
T Consensus 161 ~a~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~l~~~~i~~~aE~~~la~~a~~~~~~ 240 (358)
T 4e21_A 161 QAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVHNGIEYGLMAAYAEGLNILHHANAGKEG 240 (358)
T ss_dssp HHHHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC---
T ss_pred HHHHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 99999999999999 5789999999999999999999999999999999999998
Q ss_pred ------------------CCCHHHHHHHHhhcc-CCccccccCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHH
Q 021213 213 ------------------GISASTLTKILNSSS-ARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAK 273 (316)
Q Consensus 213 ------------------G~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~ 273 (316)
|++++++.++++.+. ..||..+... ..+...+.-..+.. +-.+. .+.++++..+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~g~~~~s~~l~~~~---~~~~~~p~~~~~~~-~~~d~--g~~r~~~~~A~ 314 (358)
T 4e21_A 241 QGADAETAPLRNPDFYRYDLDLADITEVWRRGSVISSWLLDLSA---TALLDSPDLQEFQG-RVSDS--GEGRWTVAAAI 314 (358)
T ss_dssp -----------CGGGCCCCCCHHHHHHHHTTTSTTCBHHHHHHH---HHHHHCTTCTTC---CCCCC--SHHHHHHHHHH
T ss_pred ccccccccccccchhcccCCCHHHHHHHHhCccHHHHHHHHHHH---HHHhhCCChHHHHH-HHHhc--CcHHHHHHHHH
Confidence 899999999999886 6777754221 11111110001110 00011 02367999999
Q ss_pred HcCCCCcHHHHHHHHHHHHHHcCCCCCcHHH-HHHH---HhcCCC
Q 021213 274 EVGVDCPLTSQAQDIYAKLCENGHDSKDFSC-VFQH---YYGGKD 314 (316)
Q Consensus 274 ~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~-~~~~---~~~~~~ 314 (316)
+.|+|+|++.++ ++.+.... +..+++. +++. ++++|.
T Consensus 315 ~~gvp~p~~~~a--l~~~~~s~--~~~~~~~~l~~a~r~~fG~h~ 355 (358)
T 4e21_A 315 DEGVPAHVLSSA--LYERFSSR--GEDDFANRLLSAMRYEFGGHR 355 (358)
T ss_dssp HHTCCCHHHHHH--HHHHHHHT--TTTHHHHHHHHHHC-------
T ss_pred HcCCChHHHHHH--HHHHHHHC--CCcccHHHHHHHHHHhcCCCC
Confidence 999999999875 45445543 4455543 5544 455554
No 20
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=100.00 E-value=4.8e-36 Score=277.28 Aligned_cols=265 Identities=18% Similarity=0.244 Sum_probs=212.5
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCC-----CCCcCCHHHHhh---cCCEEEEeCCCChhh
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMG-----VPTKETPFEVAE---ASDVVITMLPSSSHQ 75 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g-----~~~~~~~~~~~~---~adivi~~vp~~~~~ 75 (316)
.+|+|||||+|.||.+||.+|+++||+|++|||++++++.+.+.+ +..+.+++++++ ++|+||+|||.+..
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~- 81 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQA- 81 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHH-
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHH-
Confidence 347999999999999999999999999999999999999988763 223688999887 49999999999866
Q ss_pred HHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEec
Q 021213 76 VLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVG 155 (316)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~ 155 (316)
+++++.++.+.++ ++.+|||++++.|..+.++.+.+.+.+ .+|+++|++|++..+..|+ .+++|
T Consensus 82 v~~vl~~l~~~L~-----~g~iIId~st~~~~~t~~~~~~l~~~G----------i~fvd~pVsGg~~gA~~G~-~im~G 145 (484)
T 4gwg_A 82 VDDFIEKLVPLLD-----TGDIIIDGGNSEYRDTTRRCRDLKAKG----------ILFVGSGVSGGEEGARYGP-SLMPG 145 (484)
T ss_dssp HHHHHHHHGGGCC-----TTCEEEECSCCCHHHHHHHHHHHHHTT----------CEEEEEEEESHHHHHHHCC-EEEEE
T ss_pred HHHHHHHHHHhcC-----CCCEEEEcCCCCchHHHHHHHHHHhhc----------cccccCCccCCHHHHhcCC-eeecC
Confidence 8888876655443 567999999999988888887776532 7899999999999999999 88999
Q ss_pred CCHHHHHHHHHHHHhcCCCe-------EeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHH---h
Q 021213 156 GSEDAYQAAKPLFLSMGKNT-------IYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQS-LGISASTLTKIL---N 224 (316)
Q Consensus 156 ~~~~~~~~v~~ll~~~g~~v-------~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~-~G~~~~~~~~~~---~ 224 (316)
|+++.+++++++|+.++.++ +++|+.|+|+.+|+++|.+.+..+++++|++.++++ .|++++++.+++ +
T Consensus 146 G~~ea~~~v~pll~~ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~~v~~~w~ 225 (484)
T 4gwg_A 146 GNKEAWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMAQAFEDWN 225 (484)
T ss_dssp ECGGGHHHHHHHHHHHSCBCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhcCcccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHc
Confidence 99999999999999999887 889999999999999999999999999999999999 999999998886 5
Q ss_pred hccCCccccccCCCCCCcccCCCCCCCCCCCcchhhHH-----HHH-HHHHHHHHHcCCCCcH-HHHHHHHHHHH
Q 021213 225 SSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMA-----KDL-NLALASAKEVGVDCPL-TSQAQDIYAKL 292 (316)
Q Consensus 225 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----kd~-~~~~~~a~~~g~~~p~-~~~~~~~~~~~ 292 (316)
.+...||....+.+ .+..+|+.+++.++.+. |.. ....+.+.++|+|+|+ ..++...+...
T Consensus 226 ~G~~~S~l~e~~~~-------~l~~~D~~g~~~ld~i~d~~~~kgtG~wt~~~A~~~gvp~p~i~~av~~R~~S~ 293 (484)
T 4gwg_A 226 KTELDSFLIEITAN-------ILKFQDTDGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSS 293 (484)
T ss_dssp TTTTCBHHHHHHHH-------HHHCBCTTSSBSGGGSCCCCCSSCTTHHHHHHHHHHTCCCHHHHHHHHHHHHHH
T ss_pred CCCccchHHHHHHH-------HHhcCCccCCccHHHHhccccCcchHHHHHHHHHHcCCCchHHHHHHHHHHHhh
Confidence 67777776543321 11123333223333222 111 2567778899999994 44555555443
No 21
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-35 Score=274.00 Aligned_cols=259 Identities=19% Similarity=0.250 Sum_probs=219.6
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh-----CCCCCcCCHHHHhhc---CCEEEEeCCCChhh
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-----MGVPTKETPFEVAEA---SDVVITMLPSSSHQ 75 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~-----~g~~~~~~~~~~~~~---adivi~~vp~~~~~ 75 (316)
|..+|||||+|.||++||.+|+++||+|++|||++++++.+.+ .|+..+.+++++++. +|+||+|||++..
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~- 87 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAP- 87 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHH-
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHH-
Confidence 4578999999999999999999999999999999999999987 578888899998877 9999999999766
Q ss_pred HHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEec
Q 021213 76 VLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVG 155 (316)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~ 155 (316)
+++++.++.+.++ ++.+|||++++.+..++++.+.+.+.+ .+|++.|+++++..+..++ ++++|
T Consensus 88 v~~vl~~l~~~l~-----~g~iIId~s~~~~~~~~~l~~~l~~~g----------~~~v~~pVsgg~~~a~~G~-~im~g 151 (497)
T 2p4q_A 88 VDALINQIVPLLE-----KGDIIIDGGNSHFPDSNRRYEELKKKG----------ILFVGSGVSGGEEGARYGP-SLMPG 151 (497)
T ss_dssp HHHHHHHHGGGCC-----TTCEEEECSCCCHHHHHHHHHHHHHTT----------CEEEEEEEESHHHHHHHCC-EEEEE
T ss_pred HHHHHHHHHHhCC-----CCCEEEECCCCChhHHHHHHHHHHHcC----------CceeCCCcccChhHhhcCC-eEEec
Confidence 8999876655443 567999999999988888888776532 6889999999999888898 88899
Q ss_pred CCHHHHHHHHHHHHhcCCC------eEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHh---h
Q 021213 156 GSEDAYQAAKPLFLSMGKN------TIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQS-LGISASTLTKILN---S 225 (316)
Q Consensus 156 ~~~~~~~~v~~ll~~~g~~------v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~-~G~~~~~~~~~~~---~ 225 (316)
++++.+++++++|+.+|.+ +.++|+.|+++++|+++|.+.+..+++++|++.++++ .|++++++.+++. .
T Consensus 152 g~~e~~~~v~~ll~~~g~~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~~~~w~~ 231 (497)
T 2p4q_A 152 GSEEAWPHIKNIFQSISAKSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVFAKWNN 231 (497)
T ss_dssp ECGGGHHHHHHHHHHHSCEETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhcCccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHhcC
Confidence 9999999999999999987 7889988999999999999999999999999999999 6999999998884 5
Q ss_pred ccCCccccccCCCCCCcccCCCCCCCCCCCcchhhHH-----HHHH-HHHHHHHHcCCCCcHHHHHH
Q 021213 226 SSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMA-----KDLN-LALASAKEVGVDCPLTSQAQ 286 (316)
Q Consensus 226 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----kd~~-~~~~~a~~~g~~~p~~~~~~ 286 (316)
+...|+....+.+ .+..++|.+++.++.+. ||+. .+.+.++++|+++|++..+.
T Consensus 232 g~~~S~l~~~~~~-------~l~~~d~~~~~~vd~i~D~~~~KgtG~~~~~~A~~~Gv~~P~~~~av 291 (497)
T 2p4q_A 232 GVLDSFLVEITRD-------ILKFDDVDGKPLVEKIMDTAGQKGTGKWTAINALDLGMPVTLIGEAV 291 (497)
T ss_dssp TTTCBHHHHHHHH-------HHTCBCTTSSBGGGGSCCCCCCCSHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred CccccHHHHHHHH-------HHhcCCCCCccHHHHHHHhhccchHHHHHHHHHHHcCCCCchHHHHH
Confidence 6566655442211 12345665557777666 7765 78999999999999998853
No 22
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=100.00 E-value=5.8e-34 Score=261.64 Aligned_cols=262 Identities=15% Similarity=0.178 Sum_probs=209.1
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC--------------------CCCCcCCHHHHhhcCCEE
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM--------------------GVPTKETPFEVAEASDVV 65 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~--------------------g~~~~~~~~~~~~~adiv 65 (316)
-+|+|||+|+||+++|.+|+++||+|++|||++++++.+++. ++.+++++.+++++||+|
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDvv 88 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADAV 88 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSEE
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCEE
Confidence 489999999999999999999999999999999999988763 145678899999999999
Q ss_pred EEeCCCChh---------hHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEec
Q 021213 66 ITMLPSSSH---------QVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDA 136 (316)
Q Consensus 66 i~~vp~~~~---------~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~ 136 (316)
|+|||++.+ .+++++..+.+.+ .+++++|+.||+.|++++++.+.+.+.... ..+.+...
T Consensus 89 ii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l-----~~g~iVV~~STv~pgtt~~l~~~l~e~~~~------~d~~v~~~ 157 (446)
T 4a7p_A 89 FIAVGTPSRRGDGHADLSYVFAAAREIAENL-----TKPSVIVTKSTVPVGTGDEVERIIAEVAPN------SGAKVVSN 157 (446)
T ss_dssp EECCCCCBCTTTCCBCTHHHHHHHHHHHHSC-----CSCCEEEECSCCCTTHHHHHHHHHHHHSTT------SCCEEEEC
T ss_pred EEEcCCCCccccCCccHHHHHHHHHHHHHhc-----CCCCEEEEeCCCCchHHHHHHHHHHHhCCC------CCceEEeC
Confidence 999988752 2778776554444 356799999999999999999888764211 12567777
Q ss_pred cCCCChHhh---hcCceEEEecC-CHHHHHHHHHHHHhcCCC---eEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021213 137 PVSGGVLAA---EAGTLTFMVGG-SEDAYQAAKPLFLSMGKN---TIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLG 209 (316)
Q Consensus 137 p~~~~~~~~---~~g~~~~~~~~-~~~~~~~v~~ll~~~g~~---v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~ 209 (316)
|.+..+..+ ......+++|+ +++..++++++|+.++++ ++++++.+.++..|+++|++.+..+++++|+..+|
T Consensus 158 Pe~a~eG~a~~d~~~p~~ivvG~~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~ 237 (446)
T 4a7p_A 158 PEFLREGAAIEDFKRPDRVVVGTEDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFINEIADLC 237 (446)
T ss_dssp CCCCCTTSHHHHHHSCSCEEEECSCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccchhhhccCCCEEEEeCCcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 876433222 11222567776 588999999999998875 57888999999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHHhhccCCccccccCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Q 021213 210 QSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIY 289 (316)
Q Consensus 210 ~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~ 289 (316)
++.|+|++++.++++.++.-.+ ..+ ...+||+..++.||+.++.+.++++|+++|+++++.++.
T Consensus 238 ~~~GiD~~~v~~~~~~~~rig~--~~l--------------~pg~G~gg~c~~KD~~~l~~~A~~~g~~~~l~~~~~~iN 301 (446)
T 4a7p_A 238 EQVGADVQEVSRGIGMDNRIGG--KFL--------------HAGPGYGGSCFPKDTLALMKTAADNETPLRIVEATVQVN 301 (446)
T ss_dssp HHTTCCHHHHHHHHHTSTTC-----CC--------------CCCSCCCTTTHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHhcCCCCCC--ccC--------------CCCCCcchhhHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 9999999999999987531101 111 124567889999999999999999999999999999987
Q ss_pred HHHHH
Q 021213 290 AKLCE 294 (316)
Q Consensus 290 ~~~~~ 294 (316)
+...+
T Consensus 302 ~~~~~ 306 (446)
T 4a7p_A 302 DARKR 306 (446)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 23
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=100.00 E-value=2.4e-34 Score=267.63 Aligned_cols=259 Identities=19% Similarity=0.281 Sum_probs=212.9
Q ss_pred CCCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC----CCCCcCCHHHHhhc---CCEEEEeCCCChhh
Q 021213 3 FFDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM----GVPTKETPFEVAEA---SDVVITMLPSSSHQ 75 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~----g~~~~~~~~~~~~~---adivi~~vp~~~~~ 75 (316)
|.+++|+|||+|.||++||.+|+++||+|++|||++++++.+.+. |+..++++++++++ +|+||+|||++..
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~- 91 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAG- 91 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSH-
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHH-
Confidence 446799999999999999999999999999999999999988875 77788899998887 9999999999655
Q ss_pred HHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEec
Q 021213 76 VLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVG 155 (316)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~ 155 (316)
+++++.++.+.++ ++.+|||++++.+..++++.+.+.+. +.+|++.|+++++..+..++ +++++
T Consensus 92 v~~vl~~l~~~l~-----~g~iIId~s~g~~~~t~~l~~~l~~~----------g~~~v~~pv~gg~~~a~~g~-~i~~g 155 (480)
T 2zyd_A 92 TDAAIDSLKPYLD-----KGDIIIDGGNTFFQDTIRRNRELSAE----------GFNFIGTGVSGGEEGALKGP-SIMPG 155 (480)
T ss_dssp HHHHHHHHGGGCC-----TTCEEEECSCCCHHHHHHHHHHHHHT----------TCEEEEEEEESHHHHHHHCC-EEEEE
T ss_pred HHHHHHHHHhhcC-----CCCEEEECCCCCHHHHHHHHHHHHHC----------CCCeeCCccccCHhHHhcCC-eEEec
Confidence 8899876655443 56799999999998888888777653 26889999999998888888 88999
Q ss_pred CCHHHHHHHHHHHHhcCCC-------eEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHh---
Q 021213 156 GSEDAYQAAKPLFLSMGKN-------TIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQS-LGISASTLTKILN--- 224 (316)
Q Consensus 156 ~~~~~~~~v~~ll~~~g~~-------v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~-~G~~~~~~~~~~~--- 224 (316)
++++.+++++++|+.+|.+ +.++|+.|++.++|+++|.+.+..+++++|++.++++ .|++++++.+++.
T Consensus 156 g~~~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~l~~~w~ 235 (480)
T 2zyd_A 156 GQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTFTEWN 235 (480)
T ss_dssp SCHHHHHHHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhc
Confidence 9999999999999999987 7889999999999999999999999999999999999 6999999998873
Q ss_pred hccCCccccccCCCCCCcccCCCCCCCCCCCcchhhHH-----HHH-HHHHHHHHHcCCCCcHHHHH
Q 021213 225 SSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMA-----KDL-NLALASAKEVGVDCPLTSQA 285 (316)
Q Consensus 225 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----kd~-~~~~~~a~~~g~~~p~~~~~ 285 (316)
.+...++......+ .+..++|.+++.++.+. |+. ..+.+.+++.|+++|+++.+
T Consensus 236 ~g~~~s~l~~~~~~-------~l~~~d~~~~~~v~~i~D~~~~k~tG~~~~~~A~~~gv~~Pi~~~a 295 (480)
T 2zyd_A 236 NGELSSYLIDITKD-------IFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITES 295 (480)
T ss_dssp HTTTCBHHHHHHHH-------HHHCBCTTSSBGGGGBCCCCCCCSCTTHHHHHHHHHTCCCHHHHHH
T ss_pred CCCcccHHHHHHHH-------HHhcCCCCCcchHHHHHHHhcCchHHHHHHHHHHHcCCCCchHHHH
Confidence 45455554332111 11234554455555443 333 37889999999999999986
No 24
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=100.00 E-value=9.2e-33 Score=255.01 Aligned_cols=265 Identities=16% Similarity=0.170 Sum_probs=208.7
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC--------------------CCCCcCCHHHHhhcCCE
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM--------------------GVPTKETPFEVAEASDV 64 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~--------------------g~~~~~~~~~~~~~adi 64 (316)
+|||+|||+|+||.++|..|+++||+|++||+++++++.+++. ++..++++++++++||+
T Consensus 2 ~mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDv 81 (450)
T 3gg2_A 2 SLDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADI 81 (450)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSE
T ss_pred CCEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCE
Confidence 4799999999999999999999999999999999999888762 13456788999999999
Q ss_pred EEEeCCCCh---------hhHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEe
Q 021213 65 VITMLPSSS---------HQVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLD 135 (316)
Q Consensus 65 vi~~vp~~~---------~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~ 135 (316)
||+|||++. . +++++..+.+.++ ++++||+.||+.|++.+++.+.+.+....... ...+.+..
T Consensus 82 ViiaVptp~~~~~~~dl~~-v~~v~~~i~~~l~-----~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~--~~d~~v~~ 153 (450)
T 3gg2_A 82 IFIAVGTPAGEDGSADMSY-VLDAARSIGRAMS-----RYILIVTKSTVPVGSYRLIRKAIQEELDKREV--LIDFDIAS 153 (450)
T ss_dssp EEECCCCCBCTTSSBCCHH-HHHHHHHHHHHCC-----SCEEEEECSCCCTTHHHHHHHHHHHHHHHTTC--CCCEEEEE
T ss_pred EEEEcCCCcccCCCcChHH-HHHHHHHHHhhCC-----CCCEEEEeeeCCCcchHHHHHHHHHhccccCc--CcceeEEe
Confidence 999999883 3 7888776655443 56899999999999999998887664321100 01145566
Q ss_pred ccCCCChHhh---hcCceEEEecC-CHHHHHHHHHHHHhcCC--CeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021213 136 APVSGGVLAA---EAGTLTFMVGG-SEDAYQAAKPLFLSMGK--NTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLG 209 (316)
Q Consensus 136 ~p~~~~~~~~---~~g~~~~~~~~-~~~~~~~v~~ll~~~g~--~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~ 209 (316)
.|.+..+... ......+++|+ +++..++++++|+.+++ .++++++.+.+++.|++.|.+.+..+++++|+..+|
T Consensus 154 ~Pe~a~eG~~~~~~~~p~~ivvG~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~ 233 (450)
T 3gg2_A 154 NPEFLKEGNAIDDFMKPDRVVVGVDSDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMNDVANLC 233 (450)
T ss_dssp CCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhcccchhhhccCCCEEEEEcCCHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7765333222 12222566665 68999999999999986 357888889999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHHhhccCCccccccCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Q 021213 210 QSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIY 289 (316)
Q Consensus 210 ~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~ 289 (316)
++.|+|++++.++++.++. +....+. ..+||+..++.||+.++.+.++++|+++|+++++.++.
T Consensus 234 ~~~Gid~~~v~~~~~~~~r--ig~~~~~--------------pg~G~gg~c~~KD~~~l~~~a~~~g~~~~l~~~~~~iN 297 (450)
T 3gg2_A 234 ERVGADVSMVRLGIGSDSR--IGSKFLY--------------PGCGYGGSCFPKDVKALIRTAEDNGYRMEVLEAVERVN 297 (450)
T ss_dssp HHHTCCHHHHHHHHHTSTT--TCSSSCC--------------CSSCCCSSHHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHcCCCC--CCcccCC--------------CCCCCCcccHHhhHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 9999999999999987531 1111111 12357789999999999999999999999999999987
Q ss_pred HHHH
Q 021213 290 AKLC 293 (316)
Q Consensus 290 ~~~~ 293 (316)
+...
T Consensus 298 ~~~~ 301 (450)
T 3gg2_A 298 EKQK 301 (450)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 6543
No 25
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=100.00 E-value=4.4e-33 Score=257.15 Aligned_cols=267 Identities=15% Similarity=0.129 Sum_probs=205.3
Q ss_pred CCeEEEEccchhhHHHHHHHHhC-CC-eEEEEeCChh----HHHHHHhC---------------------C-CCCcCCHH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKA-GY-KMAVHDVNCN----VMKMFSDM---------------------G-VPTKETPF 56 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~-g~-~V~~~~r~~~----~~~~l~~~---------------------g-~~~~~~~~ 56 (316)
.|||+|||+|+||+++|.+|+++ || +|++||++++ +++.+++. | +..+++ .
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd-~ 96 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD-F 96 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC-G
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc-H
Confidence 47999999999999999999999 99 9999999999 88888752 2 233445 6
Q ss_pred HHhhcCCEEEEeCCCCh-------hhHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHh-h-chhhhccCC
Q 021213 57 EVAEASDVVITMLPSSS-------HQVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVS-N-CILKEKKDS 127 (316)
Q Consensus 57 ~~~~~adivi~~vp~~~-------~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~-~-~~~~~~~g~ 127 (316)
+++++||+||+|||++. .+++.+....+.+.+. ..++++||+.||+.|++++++.+.+. + .+.. .
T Consensus 97 ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~--l~~g~iVV~~STv~pgtt~~v~~~ile~~~g~~--~-- 170 (478)
T 3g79_A 97 SRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKY--LKPGMLVVLESTITPGTTEGMAKQILEEESGLK--A-- 170 (478)
T ss_dssp GGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHH--CCTTCEEEECSCCCTTTTTTHHHHHHHHHHCCC--B--
T ss_pred HHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhh--cCCCcEEEEeCCCChHHHHHHHHHHHHHhcCCC--c--
Confidence 78899999999999873 1133333222223322 23567999999999999999987543 2 2210 0
Q ss_pred CCCccEEeccCCCChHhhhcC---ceEEEecCCHHHHHHHHHHHHhc-CCCeEeeCCcchHHHHHHHHHHHHHHHHHHHH
Q 021213 128 WENPVMLDAPVSGGVLAAEAG---TLTFMVGGSEDAYQAAKPLFLSM-GKNTIYCGGAGNGAAAKICNNLTMAVSMLGVS 203 (316)
Q Consensus 128 ~~~~~~~~~p~~~~~~~~~~g---~~~~~~~~~~~~~~~v~~ll~~~-g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~ 203 (316)
-..+.++++|.+..+..+..+ ...++.|++++.+++++++|+.+ ++.++++++.++++..|+++|++.+..+++++
T Consensus 171 ~~d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~~~~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~~a~~Ia~~n 250 (478)
T 3g79_A 171 GEDFALAHAPERVMVGRLLKNIREHDRIVGGIDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTFRDLQIAAIN 250 (478)
T ss_dssp TTTBEEEECCCCCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceeEEeCCccCCccchhhhhcCCcEEEEeCCHHHHHHHHHHHhhhccCCeEEeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012578999988555443332 23678888999999999999999 78889999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHhhccCCccccccCCCCCCcccCCCCCCCCCCC--cchhhHHHHHHHHHHHHHHcCCC---
Q 021213 204 EALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGG--FASKLMAKDLNLALASAKEVGVD--- 278 (316)
Q Consensus 204 Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~kd~~~~~~~a~~~g~~--- 278 (316)
|+..+|++.|+|++++.+.++... .. ++....|.|| ++..|+.||+.++.+.+++.|++
T Consensus 251 E~~~l~e~~GiD~~~v~~~~~~~~----~~------------ri~~~~~~PG~G~GG~c~~KD~~~l~~~a~~~g~~~~~ 314 (478)
T 3g79_A 251 QLALYCEAMGINVYDVRTGVDSLK----GE------------GITRAVLWPGAGVGGHCLTKDTYHLERGVKIGRGELDY 314 (478)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHTSC----CS------------SSCCCCCCCCSCCCSSHHHHHHHHHHHHHTTSSCCCCC
T ss_pred HHHHHHHHcCCCHHHHHHHHCCCc----hh------------hhccccCCCCCCcchhhHHHHHHHHHHHHHHcCCCccc
Confidence 999999999999999999987632 10 0112234443 46689999999999999999987
Q ss_pred ----CcHHHHHHHHHHHHHH
Q 021213 279 ----CPLTSQAQDIYAKLCE 294 (316)
Q Consensus 279 ----~p~~~~~~~~~~~~~~ 294 (316)
+++++++.++.+...+
T Consensus 315 ~~~~~~li~~~~~iN~~~~~ 334 (478)
T 3g79_A 315 PEGADSIYVLARKVNDFMPA 334 (478)
T ss_dssp CSSCCCHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHH
Confidence 8999999987765543
No 26
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=100.00 E-value=8.9e-33 Score=257.92 Aligned_cols=264 Identities=17% Similarity=0.233 Sum_probs=215.2
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh-----CCCCCcCCHHHHhh---cCCEEEEeCCCChhhH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-----MGVPTKETPFEVAE---ASDVVITMLPSSSHQV 76 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~-----~g~~~~~~~~~~~~---~adivi~~vp~~~~~~ 76 (316)
+|+|+|||+|.||++++.+|+++||+|++|||++++++.+.+ .|+..+++++++++ ++|+||+|||++.. +
T Consensus 2 ~m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~-v 80 (482)
T 2pgd_A 2 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQA-V 80 (482)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHH-H
T ss_pred CCeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHH-H
Confidence 368999999999999999999999999999999999999987 67777889999875 89999999999765 8
Q ss_pred HHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecC
Q 021213 77 LDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGG 156 (316)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~ 156 (316)
++++.++.+.++ ++++||+++++.+....++.+.+.+. +.+|++.|+++++..+..++ ++++++
T Consensus 81 ~~vl~~l~~~l~-----~g~iII~~s~~~~~~~~~l~~~l~~~----------g~~~v~~pv~g~~~~a~~g~-~i~~gg 144 (482)
T 2pgd_A 81 DNFIEKLVPLLD-----IGDIIIDGGNSEYRDTMRRCRDLKDK----------GILFVGSGVSGGEDGARYGP-SLMPGG 144 (482)
T ss_dssp HHHHHHHHHHCC-----TTCEEEECSCCCHHHHHHHHHHHHHT----------TCEEEEEEEESHHHHHHHCC-EEEEEE
T ss_pred HHHHHHHHhhcC-----CCCEEEECCCCCHHHHHHHHHHHHHc----------CCeEeCCCCCCChhhhccCC-eEEeCC
Confidence 888876554443 45799999999988777777777652 26889999999888888888 778899
Q ss_pred CHHHHHHHHHHHHhcCCCe-------EeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHh---h
Q 021213 157 SEDAYQAAKPLFLSMGKNT-------IYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSL-GISASTLTKILN---S 225 (316)
Q Consensus 157 ~~~~~~~v~~ll~~~g~~v-------~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~-G~~~~~~~~~~~---~ 225 (316)
+++.++.++++|+.+|.++ .++++.|.++++|+++|.+.+..+++++|++.++++. |++++++.+++. .
T Consensus 145 ~~e~~~~v~~ll~~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~~~~w~~ 224 (482)
T 2pgd_A 145 NKEAWPHIKAIFQGIAAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFEEWNK 224 (482)
T ss_dssp CTTTHHHHHHHHHHHSCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHhhhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHhcC
Confidence 9999999999999999876 6788889999999999999999999999999999999 999999999885 3
Q ss_pred ccCCccccccCCCCCCcccCCCCCCCCCCCcchhhH------HHHHHHHHHHHHHcCCCCcHHH-HHHHHHHHH
Q 021213 226 SSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLM------AKDLNLALASAKEVGVDCPLTS-QAQDIYAKL 292 (316)
Q Consensus 226 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~kd~~~~~~~a~~~g~~~p~~~-~~~~~~~~~ 292 (316)
+...|+....+. +.+..+++.+++.++.+ .++.+.+++.++++|+++|++. ++++.+...
T Consensus 225 g~~~S~l~~~~~-------~~l~~~d~~~~~~ld~i~d~~~~k~t~~~~~~~A~~~Gv~~P~i~~av~~~~~s~ 291 (482)
T 2pgd_A 225 TELDSFLIEITA-------SILKFQDADGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSS 291 (482)
T ss_dssp TTTCBHHHHHHH-------HHHHCBCTTSSBSGGGSCCCCCCCSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHH
T ss_pred CCcCchHHHHHh-------HHhhccCCCCCeeecccccccccccHHHHHHHHHHHcCCCcchHHHHHHHHhhhh
Confidence 444444332211 11223455555655544 4666789999999999999995 677766444
No 27
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=100.00 E-value=4.4e-33 Score=241.28 Aligned_cols=256 Identities=19% Similarity=0.224 Sum_probs=203.4
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeC--ChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDV--NCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r--~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
|||+|||+|+||.+++..|.++||+|++|+| ++++.+.+.+.|+. +++.++++++|+||+|+|++.. .+.+ .++
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~aDvvi~~v~~~~~-~~~~-~~~ 76 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT--ETSEEDVYSCPVVISAVTPGVA-LGAA-RRA 76 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE--ECCHHHHHTSSEEEECSCGGGH-HHHH-HHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc--CCHHHHHhcCCEEEEECCCHHH-HHHH-HHH
Confidence 5899999999999999999999999999999 77888888877776 7788888999999999998764 4443 322
Q ss_pred CCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHHHHHH
Q 021213 84 NGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQA 163 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~ 163 (316)
.+.+ ++ ++|+++++.+.+.+.+.+.+.+. + |++.|+++++.....+.. ++++++.+ ++
T Consensus 77 ~~~~------~~-~vi~~s~~~~~~~~~l~~~~~~~----------g--~~~~~v~~~~~~~~~g~~-~~~~g~~~--~~ 134 (264)
T 1i36_A 77 GRHV------RG-IYVDINNISPETVRMASSLIEKG----------G--FVDAAIMGSVRRKGADIR-IIASGRDA--EE 134 (264)
T ss_dssp HTTC------CS-EEEECSCCCHHHHHHHHHHCSSS----------E--EEEEEECSCHHHHGGGCE-EEEESTTH--HH
T ss_pred HHhc------Cc-EEEEccCCCHHHHHHHHHHHhhC----------C--eeeeeeeCCccccccCCe-EEecCCcH--HH
Confidence 2212 33 99999999998888888776541 2 788899988887778886 77777665 78
Q ss_pred HHHHHHhcCCCeEeeCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCccccccCCCCCCc
Q 021213 164 AKPLFLSMGKNTIYCGG-AGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGV 242 (316)
Q Consensus 164 v~~ll~~~g~~v~~~g~-~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 242 (316)
+++ |+.+|++++++++ .|.+.++|+++|.+.+.++.+++|++.++++.|++++ ..+.+..+.+.++... .+
T Consensus 135 ~~~-l~~~g~~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~-~~~~~~~~~g~~~~~~----~~-- 206 (264)
T 1i36_A 135 FMK-LNRYGLNIEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEED-VLEMLEYTEGNDFRES----AI-- 206 (264)
T ss_dssp HHG-GGGGTCEEEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHTTSCSSTHHH----HH--
T ss_pred hhh-HHHcCCeeEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHhcCccHHHH----HH--
Confidence 889 9999998889987 7999999999999999999999999999999999987 6687776543233211 11
Q ss_pred ccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCCcH
Q 021213 243 MEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDF 302 (316)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~ 302 (316)
.+..+++.++++ +.||++.++++++++ +++|++++++++++++.+.|++.+|-
T Consensus 207 ---~~~~~~~~~g~~---~~~~~~~~~~~a~~~-v~~p~~~~v~~~~~~~~~~~~~~~~~ 259 (264)
T 1i36_A 207 ---SRLKSSCIHARR---RYEEMKEVQDMLAEV-IDPVMPTCIIRIFDKLKDVKVSADAR 259 (264)
T ss_dssp ---HHHHHHHHTHHH---HHHHHHHHHHHHHTT-SCCSHHHHHHHHHHHHCC------GG
T ss_pred ---HHhcCCCCcchh---hHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHcCCChhhH
Confidence 122456666654 679999999999999 99999999999999999988877663
No 28
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=100.00 E-value=1.7e-32 Score=255.55 Aligned_cols=257 Identities=21% Similarity=0.307 Sum_probs=210.1
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC----CCCCcCCHHHHhhc---CCEEEEeCCCChhhHH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM----GVPTKETPFEVAEA---SDVVITMLPSSSHQVL 77 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~----g~~~~~~~~~~~~~---adivi~~vp~~~~~~~ 77 (316)
+|+|+|||+|.||++++.+|+++||+|++|||++++++.+.+. |+..+.+++++++. +|+||+|||++.. ++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~-v~ 83 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAA-TD 83 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHH-HH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchH-HH
Confidence 4789999999999999999999999999999999999888764 67778899998876 9999999998766 88
Q ss_pred HHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCC
Q 021213 78 DVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGS 157 (316)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~ 157 (316)
+++.++.+.++ ++++||+++++.+..++++.+.+.+. +.+|++.|+++++..+..++ +++++++
T Consensus 84 ~vl~~l~~~l~-----~g~iiId~s~~~~~~~~~l~~~l~~~----------g~~~v~~pv~gg~~~a~~g~-~i~~gg~ 147 (474)
T 2iz1_A 84 ATIKSLLPLLD-----IGDILIDGGNTHFPDTMRRNAELADS----------GINFIGTGVSGGEKGALLGP-SMMPGGQ 147 (474)
T ss_dssp HHHHHHGGGCC-----TTCEEEECSCCCHHHHHHHHHHTTTS----------SCEEEEEEECSHHHHHHHCC-CEEEEEC
T ss_pred HHHHHHHhhCC-----CCCEEEECCCCCHHHHHHHHHHHHHC----------CCeEECCCCCCChhhhccCC-eEEecCC
Confidence 88876555443 56799999999988777777766542 26889999999888888888 7788999
Q ss_pred HHHHHHHHHHHHhcCCC--------eEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHhh---
Q 021213 158 EDAYQAAKPLFLSMGKN--------TIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQS-LGISASTLTKILNS--- 225 (316)
Q Consensus 158 ~~~~~~v~~ll~~~g~~--------v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~-~G~~~~~~~~~~~~--- 225 (316)
++.++.++++|+.+|.+ +.++|+.|.+.++|+++|.+.+..+.+++|++.++++ .|++++++.+++..
T Consensus 148 ~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~~l~~~w~~ 227 (474)
T 2iz1_A 148 KEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEEWNE 227 (474)
T ss_dssp HHHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcC
Confidence 99999999999999987 5788889999999999999999999999999999999 79999999888843
Q ss_pred ccCCccccccCCCCCCcccCCCCCCCCCCC-cchhhHH-----HHHH-HHHHHHHHcCCCCcHHHHH
Q 021213 226 SSARCWSSDSYNPVPGVMEGVPASRNYGGG-FASKLMA-----KDLN-LALASAKEVGVDCPLTSQA 285 (316)
Q Consensus 226 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----kd~~-~~~~~a~~~g~~~p~~~~~ 285 (316)
+...++......+ .+..+|+.+| +.++.+. |+.. .+.+.++++|+++|+++.+
T Consensus 228 g~~~s~l~~~~~~-------~l~~~d~~~g~~~vd~i~D~~~~k~tG~~~~~~A~~~gv~~P~~~~a 287 (474)
T 2iz1_A 228 GELDSYLIEITKE-------VLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDLGVPLPLITES 287 (474)
T ss_dssp TTTCBHHHHHHHH-------HTTCBCSSSSSBGGGGBCSCCCCCSHHHHHHHHHHHHTCCCHHHHHH
T ss_pred CCccccHHHhhhh-------HhhcCCCCCChhHHHHHHHhhcccchHHHHHHHHHHcCCCCchHHHH
Confidence 4344443321111 1224566555 5665444 5555 6789999999999999986
No 29
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=100.00 E-value=3.8e-31 Score=240.77 Aligned_cols=252 Identities=15% Similarity=0.153 Sum_probs=201.7
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC------------------CCCCcCCHHHHhhcCCEEE
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM------------------GVPTKETPFEVAEASDVVI 66 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~------------------g~~~~~~~~~~~~~adivi 66 (316)
.|||+|||+|+||.++|..|++ ||+|++||+++++++.+++. ++..++++.+++++||+||
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aDvVi 114 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNADYVI 114 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCCEEE
Confidence 3799999999999999999998 99999999999999888762 3556788899999999999
Q ss_pred EeCCCChh---------hHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEecc
Q 021213 67 TMLPSSSH---------QVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAP 137 (316)
Q Consensus 67 ~~vp~~~~---------~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p 137 (316)
+|||++.+ ++++++..+.+ ++ +++++|+.||+.|++++++.+.+... .+..+|
T Consensus 115 iaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~-----~g~iVV~~STv~pgtt~~l~~~l~~~------------~v~~sP 176 (432)
T 3pid_A 115 IATPTDYDPKTNYFNTSTVEAVIRDVTE-IN-----PNAVMIIKSTIPVGFTRDIKERLGID------------NVIFSP 176 (432)
T ss_dssp ECCCCEEETTTTEEECHHHHHHHHHHHH-HC-----TTSEEEECSCCCTTHHHHHHHHHTCC------------CEEECC
T ss_pred EeCCCccccccccccHHHHHHHHHHHHh-cC-----CCcEEEEeCCCChHHHHHHHHHHhhc------------cEeecC
Confidence 99998731 26666665544 42 56799999999999999999877642 345699
Q ss_pred CCCChHhhhcCce---EEEecCCHHHHHHHHHHHHh--cCCC-eEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021213 138 VSGGVLAAEAGTL---TFMVGGSEDAYQAAKPLFLS--MGKN-TIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQS 211 (316)
Q Consensus 138 ~~~~~~~~~~g~~---~~~~~~~~~~~~~v~~ll~~--~g~~-v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~ 211 (316)
.++.+..+..+.+ .+++|++.+.++++.++|.. ++.. .++.++.++|+++|+++|.+.+..+++++|+..+|++
T Consensus 177 e~~~~G~A~~~~l~p~rIvvG~~~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~lae~ 256 (432)
T 3pid_A 177 EFLREGRALYDNLHPSRIVIGERSARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYAES 256 (432)
T ss_dssp CCCCTTSHHHHHHSCSCEEESSCSHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcchhhhcccCCceEEecCCHHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9987776666555 78999998999999999987 4432 3566788999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHhhccCCccccccCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Q 021213 212 LGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAK 291 (316)
Q Consensus 212 ~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~ 291 (316)
.|+|++++.+.++.... ....+ +.| ..|++..|+.||..++.. +..|++.++++++.++.+.
T Consensus 257 ~GiD~~~v~~~~~~dpr---ig~~~-~~p------------g~G~GG~C~pkD~~~L~~--~~~~~~~~li~~~~~~N~~ 318 (432)
T 3pid_A 257 QGLNSKQIIEGVCLDPR---IGNHY-NNP------------SFGYGGYCLPKDTKQLLA--NYESVPNNIIAAIVDANRT 318 (432)
T ss_dssp TTCCHHHHHHHHHTSTT---TCSSS-CCC------------CSCCCTTTHHHHHHHHHH--HTTTSCCSHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHccCCC---CCccc-CCC------------CCCCcccchhhhHHHHHH--HhcCCchhHHHHHHHHHHh
Confidence 99999999999986531 10100 011 235667899999988864 3469999999999987665
Q ss_pred HH
Q 021213 292 LC 293 (316)
Q Consensus 292 ~~ 293 (316)
..
T Consensus 319 ~~ 320 (432)
T 3pid_A 319 RK 320 (432)
T ss_dssp HH
T ss_pred hH
Confidence 43
No 30
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=100.00 E-value=6.6e-32 Score=251.48 Aligned_cols=256 Identities=18% Similarity=0.308 Sum_probs=206.9
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC-C-------CCCcCCHHHHhhc---CCEEEEeCCCChh
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-G-------VPTKETPFEVAEA---SDVVITMLPSSSH 74 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~-g-------~~~~~~~~~~~~~---adivi~~vp~~~~ 74 (316)
|||+|||+|.||++++.+|+++||+|++|||++++++.+.+. | +..+++++++++. +|+||+|||+...
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 689999999999999999999999999999999999888764 5 5667889898874 9999999999765
Q ss_pred hHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEe
Q 021213 75 QVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMV 154 (316)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~ 154 (316)
+++++.++.+.++ ++++||+++++.+...+++.+.+.+. +.+|++.|+++++..+..++ .+++
T Consensus 82 -v~~vl~~l~~~l~-----~g~iIId~sng~~~~~~~l~~~l~~~----------g~~~v~~pv~gg~~~a~~g~-~i~~ 144 (478)
T 1pgj_A 82 -TDSTIEQLKKVFE-----KGDILVDTGNAHFKDQGRRAQQLEAA----------GLRFLGMGISGGEEGARKGP-AFFP 144 (478)
T ss_dssp -HHHHHHHHHHHCC-----TTCEEEECCCCCHHHHHHHHHHHHTT----------TCEEEEEEEESHHHHHHHCC-EEEE
T ss_pred -HHHHHHHHHhhCC-----CCCEEEECCCCChHHHHHHHHHHHHC----------CCeEEEeeccCCHHHHhcCC-eEec
Confidence 7888866544443 45799999999988777777777642 26889999999888888888 7888
Q ss_pred cCCHHHHHHHHHHHHhcCCC-------eEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHh---
Q 021213 155 GGSEDAYQAAKPLFLSMGKN-------TIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILN--- 224 (316)
Q Consensus 155 ~~~~~~~~~v~~ll~~~g~~-------v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~--- 224 (316)
+++++.++.++++|+.+|.+ +.++++.|.+.++|+++|.+.+..+++++|++.++++.|++++++.+++.
T Consensus 145 gg~~~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~~~w~ 224 (478)
T 1pgj_A 145 GGTLSVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMGLNNDEVAAVLEDWK 224 (478)
T ss_dssp EECHHHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhc
Confidence 99999999999999999987 67889899999999999999999999999999999999999999999886
Q ss_pred -hccCCccccccCCCCCCcccCCCCCCCCCCCcchhhHH-----HHH-HHHHHHHHHcCCCCcHHHHH
Q 021213 225 -SSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMA-----KDL-NLALASAKEVGVDCPLTSQA 285 (316)
Q Consensus 225 -~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----kd~-~~~~~~a~~~g~~~p~~~~~ 285 (316)
.+.+.++......+ ++ ..+++.+.+.++.+. |++ +.++++++++|+++|+++.+
T Consensus 225 ~~g~~~s~l~~~~~~---~l----~~~d~~G~~~ld~i~D~~~~kgtg~~~~~~A~~~Gv~~Pi~~~a 285 (478)
T 1pgj_A 225 SKNFLKSYMLDISIA---AA----RAKDKDGSYLTEHVMDRIGSKGTGLWSAQEALEIGVPAPSLNMA 285 (478)
T ss_dssp HTSTTCBHHHHHHHH---HH----HCBCTTSSBGGGGBCCCCCCCSHHHHHHHHHHHHTCCCHHHHHH
T ss_pred cCCCcCchHHHhhch---hh----hcCCCCChhHHHHHHHHhcCccHHHHHHHHHHHhCCCChHHHHH
Confidence 45454443322111 11 123442114454443 344 68999999999999999983
No 31
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.97 E-value=1.3e-30 Score=243.10 Aligned_cols=261 Identities=13% Similarity=0.137 Sum_probs=200.9
Q ss_pred CCeEEEEccchhhHHHHHHHHhC--CCeEEEEeCChhHHHHHHhCC-------------------CCCcCCHHHHhhcCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKA--GYKMAVHDVNCNVMKMFSDMG-------------------VPTKETPFEVAEASD 63 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~--g~~V~~~~r~~~~~~~l~~~g-------------------~~~~~~~~~~~~~ad 63 (316)
+|||+|||+|+||.++|.+|+++ ||+|++|||++++++.+++.+ +..++++.+++++||
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aD 88 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEAD 88 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCC
Confidence 47999999999999999999998 799999999999999887532 344567778889999
Q ss_pred EEEEeCCCChh-------------hHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh-chhhhccCCCC
Q 021213 64 VVITMLPSSSH-------------QVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN-CILKEKKDSWE 129 (316)
Q Consensus 64 ivi~~vp~~~~-------------~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~-~~~~~~~g~~~ 129 (316)
+||+|||++.. .+++++..+.+.+ .++++||+.||+.|++.+.+.+.+.+ .+.....
T Consensus 89 vvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l-----~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~~~---- 159 (481)
T 2o3j_A 89 LIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYA-----GGPKIVVEKSTVPVKAAESIGCILREAQKNNENL---- 159 (481)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHC-----CSCEEEEECSCCCTTHHHHHHHHHHHHTC----C----
T ss_pred EEEEecCCccccccccccCCCcHHHHHHHHHHHHHhC-----CCCCEEEECCCCCCCHHHHHHHHHHHhhCcCcCC----
Confidence 99999988641 1566665544444 25679999999999999998887765 3210000
Q ss_pred CccEEeccCCCChHhhh---cCceEEEecCCH-----HHHHHHHHHHHhcCC-CeEeeCCcchHHHHHHHHHHHHHHHHH
Q 021213 130 NPVMLDAPVSGGVLAAE---AGTLTFMVGGSE-----DAYQAAKPLFLSMGK-NTIYCGGAGNGAAAKICNNLTMAVSML 200 (316)
Q Consensus 130 ~~~~~~~p~~~~~~~~~---~g~~~~~~~~~~-----~~~~~v~~ll~~~g~-~v~~~g~~g~a~~~k~~~n~~~~~~~~ 200 (316)
.+.+...|.+..+..+. .....+++|++. +.++.++++|+.++. .++++++.+.+++.|++.|.+.+..++
T Consensus 160 d~~v~~~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~~~a~~ia 239 (481)
T 2o3j_A 160 KFQVLSNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVANAFLAQRIS 239 (481)
T ss_dssp CEEEEECCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEeCcccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHHHHHHHHH
Confidence 13456778764433322 122256666543 578899999999986 778888999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHhhccCCccccccCCCCCCcccCCCCCCCCCC--CcchhhHHHHHHHHHHHHHHcCCC
Q 021213 201 GVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGG--GFASKLMAKDLNLALASAKEVGVD 278 (316)
Q Consensus 201 ~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~kd~~~~~~~a~~~g~~ 278 (316)
+++|+..+|++.|+|++++.+.++.+.. +.. ..+.+ |++..++.||+.++.+.|++.|++
T Consensus 240 ~~nE~~~la~~~Gid~~~v~~~~~~~~r--i~~----------------~~~~pg~g~gg~c~~KD~~~l~~~A~~~g~~ 301 (481)
T 2o3j_A 240 SINSISAVCEATGAEISEVAHAVGYDTR--IGS----------------KFLQASVGFGGSCFQKDVLSLVYLCESLNLP 301 (481)
T ss_dssp HHHHHHHHHHHHSCCHHHHHHHHHTSTT--TCS----------------SSCCCCSCCCSSSHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHhCcCHHHHHHHHccCCC--CCC----------------CCCCCCCccCCccHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999986531 111 12233 356789999999999999999999
Q ss_pred --CcHHHHHHHHHHHH
Q 021213 279 --CPLTSQAQDIYAKL 292 (316)
Q Consensus 279 --~p~~~~~~~~~~~~ 292 (316)
+|+++++.++.+..
T Consensus 302 ~~~~l~~~~~~~N~~~ 317 (481)
T 2o3j_A 302 QVADYWQGVININNWQ 317 (481)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHhh
Confidence 99999988766554
No 32
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.97 E-value=1.6e-30 Score=241.81 Aligned_cols=263 Identities=16% Similarity=0.194 Sum_probs=200.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCC--------------------CCCcCCHHHHhhcCCE
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMG--------------------VPTKETPFEVAEASDV 64 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g--------------------~~~~~~~~~~~~~adi 64 (316)
.|||+|||+|+||+++|..|+++||+|++||+++++++.+++.+ +..++++++++++||+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 48999999999999999999999999999999999999988742 2445677788899999
Q ss_pred EEEeCCCC---------hhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEe
Q 021213 65 VITMLPSS---------SHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLD 135 (316)
Q Consensus 65 vi~~vp~~---------~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~ 135 (316)
||+|||++ .. +++++..+.+.++ ++++||+.||+.|++.+.+.+.+.+.......+ ..+.+..
T Consensus 88 viiaVptp~~~~~~~dl~~-v~~v~~~i~~~l~-----~~~iVV~~STv~~gt~~~l~~~l~~~~~~g~~~--~~~~v~~ 159 (478)
T 2y0c_A 88 QFIAVGTPPDEDGSADLQY-VLAAARNIGRYMT-----GFKVIVDKSTVPVGTAERVRAAVAEELAKRGGD--QMFSVVS 159 (478)
T ss_dssp EEECCCCCBCTTSSBCCHH-HHHHHHHHHHHCC-----SCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCC--CCEEEEE
T ss_pred EEEEeCCCcccCCCccHHH-HHHHHHHHHHhcC-----CCCEEEEeCCcCCCchHHHHHHHHHHhcCCCCC--ccEEEEE
Confidence 99999985 34 8888876655553 567999999999999998888776530000000 0123455
Q ss_pred ccCCCChHh---hhcCceEEEecCC-H----HHHHHHHHHHHhcCC--CeEeeCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 021213 136 APVSGGVLA---AEAGTLTFMVGGS-E----DAYQAAKPLFLSMGK--NTIYCGGAGNGAAAKICNNLTMAVSMLGVSEA 205 (316)
Q Consensus 136 ~p~~~~~~~---~~~g~~~~~~~~~-~----~~~~~v~~ll~~~g~--~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea 205 (316)
.|.+..+.. .......+++|++ + +..+.++++|+.+.+ .++++++++.+++.|++.|.+.+..+++++|+
T Consensus 160 ~Pe~~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~ 239 (478)
T 2y0c_A 160 NPEFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNEL 239 (478)
T ss_dssp CCCCCCTTCHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhhcccceeeccCCCCEEEEEECCCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555422211 1122224666654 5 788999999998875 57888899999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHhhccCCccccccCCCCCCcccCCCCCCCCCC--CcchhhHHHHHHHHHHHHHHcCCCCcHHH
Q 021213 206 LTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGG--GFASKLMAKDLNLALASAKEVGVDCPLTS 283 (316)
Q Consensus 206 ~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~kd~~~~~~~a~~~g~~~p~~~ 283 (316)
..+|++.|++++++.+.++.... +. ...+.+ +++..++.||..++.++++++|+++|+++
T Consensus 240 ~~la~~~Gid~~~v~~~i~~~~r--ig----------------~~~~~pG~g~gg~c~~kD~~~l~~~A~~~gv~~pl~~ 301 (478)
T 2y0c_A 240 ANLADRFGADIEAVRRGIGSDPR--IG----------------YHFLYAGCGYGGSCFPKDVEALIRTADEHGQSLQILK 301 (478)
T ss_dssp HHHHHHTTCCHHHHHHHHHTSTT--TC----------------STTCCCSSCCCSSSHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred HHHHHHhCCCHHHHHHHHhcCCc--cC----------------cccCCCCcccccCcCHHHHHHHHHHHHHcCCCcHHHH
Confidence 99999999999999988764210 00 111222 24456889999999999999999999999
Q ss_pred HHHHHHHHHH
Q 021213 284 QAQDIYAKLC 293 (316)
Q Consensus 284 ~~~~~~~~~~ 293 (316)
+++++++...
T Consensus 302 ~v~~in~~~~ 311 (478)
T 2y0c_A 302 AVSSVNATQK 311 (478)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhH
Confidence 9999887653
No 33
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.97 E-value=5.5e-31 Score=245.20 Aligned_cols=251 Identities=14% Similarity=0.147 Sum_probs=188.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhC--CCeEEEEeCChhHHHHHHh-------------------CCCCCcCCHHHHhhcCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKA--GYKMAVHDVNCNVMKMFSD-------------------MGVPTKETPFEVAEASD 63 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~--g~~V~~~~r~~~~~~~l~~-------------------~g~~~~~~~~~~~~~ad 63 (316)
+|||+|||+|+||.++|.+|+++ ||+|++|||++++++.+++ .++..++++.+++++||
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aD 84 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEAD 84 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCC
Confidence 37999999999999999999999 8999999999999888643 24555678888899999
Q ss_pred EEEEeCCCChh-------------hHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCC
Q 021213 64 VVITMLPSSSH-------------QVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWEN 130 (316)
Q Consensus 64 ivi~~vp~~~~-------------~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~ 130 (316)
+||+|||++.+ .+.+++..+.+.+ .++++||++||+.|++.+.+.+.+.+.+
T Consensus 85 vViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l-----~~g~iVV~~STv~~g~~~~l~~~l~~~~---------- 149 (467)
T 2q3e_A 85 LVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNS-----NGYKIVTEKSTVPVRAAESIRRIFDANT---------- 149 (467)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTC-----CSEEEEEECSCCCTTHHHHHHHHHHHTC----------
T ss_pred EEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhC-----CCCCEEEECCcCCchHHHHHHHHHHHhC----------
Confidence 99999987653 0123333332222 3567999999999999988888776532
Q ss_pred ccEEeccCCCChHhhhcCce--------EEEecC-----CHHHHHHHHHHHHhc-CCCeEeeCCcchHHHHHHHHHHHHH
Q 021213 131 PVMLDAPVSGGVLAAEAGTL--------TFMVGG-----SEDAYQAAKPLFLSM-GKNTIYCGGAGNGAAAKICNNLTMA 196 (316)
Q Consensus 131 ~~~~~~p~~~~~~~~~~g~~--------~~~~~~-----~~~~~~~v~~ll~~~-g~~v~~~g~~g~a~~~k~~~n~~~~ 196 (316)
..+++.++..++.....|.. .+++|+ +++..+.++++++.+ +..++++++.+.+++.|++.|.+.+
T Consensus 150 ~~~~d~~V~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a 229 (467)
T 2q3e_A 150 KPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLA 229 (467)
T ss_dssp CTTCEEEEEECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHH
Confidence 11223333333333333332 366777 788899999999999 7677888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCccccccCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcC
Q 021213 197 VSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVG 276 (316)
Q Consensus 197 ~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g 276 (316)
..+++++|+..+|++.|++++++.++++.... +....+.| ..||+..++.||+.++.+.++++|
T Consensus 230 ~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~~--~~~~~~~p--------------g~g~gg~c~~kD~~~l~~~a~~~g 293 (467)
T 2q3e_A 230 QRISSINSISALCEATGADVEEVATAIGMDQR--IGNKFLKA--------------SVGFGGSCFQKDVLNLVYLCEALN 293 (467)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHHHHHHTSTT--TCSSSCCC--------------CSCCCSSSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhCcCHHHHHHHHcCCCC--CCccccCC--------------CCCCCCccHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999986542 11111111 123566899999999999999999
Q ss_pred CC--CcHHHHHH
Q 021213 277 VD--CPLTSQAQ 286 (316)
Q Consensus 277 ~~--~p~~~~~~ 286 (316)
++ .++++++.
T Consensus 294 ~~~~~~~~~~~~ 305 (467)
T 2q3e_A 294 LPEVARYWQQVI 305 (467)
T ss_dssp CHHHHHHHHHHH
T ss_pred CchHHHHHHHHH
Confidence 86 34444443
No 34
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.97 E-value=6.8e-31 Score=239.58 Aligned_cols=257 Identities=19% Similarity=0.236 Sum_probs=188.2
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCc-CCHHHH---------------hhcCCEEEEeC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTK-ETPFEV---------------AEASDVVITML 69 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~-~~~~~~---------------~~~adivi~~v 69 (316)
.|..|||+|+||.++|.+|+++||+|++||+++++++.+++.+.... ...+++ +++||+||+||
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvii~V 91 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFIIAV 91 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEEECC
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEEEEe
Confidence 58999999999999999999999999999999999999987432111 111111 35799999999
Q ss_pred CCChh----------hHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh-chhhhccCCCCCccEEeccC
Q 021213 70 PSSSH----------QVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN-CILKEKKDSWENPVMLDAPV 138 (316)
Q Consensus 70 p~~~~----------~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~-~~~~~~~g~~~~~~~~~~p~ 138 (316)
|++.+ +++.+...+.+.+ .++++||+.||+.|++++++.+.+.+ .+.... ..+.++++|.
T Consensus 92 pTp~~~~~~~~~Dl~~V~~~~~~i~~~l-----~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~----~d~~v~~~Pe 162 (431)
T 3ojo_A 92 PTPNNDDQYRSCDISLVMRALDSILPFL-----KKGNTIIVESTIAPKTMDDFVKPVIENLGFTIG----EDIYLVHCPE 162 (431)
T ss_dssp CCCBCSSSSCBBCCHHHHHHHHHHGGGC-----CTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBT----TTEEEEECCC
T ss_pred CCCccccccCCccHHHHHHHHHHHHHhC-----CCCCEEEEecCCChhHHHHHHHHHHHHcCCCcC----CCeEEEECCC
Confidence 99762 1344444333333 36789999999999999999887544 221000 1257899998
Q ss_pred CCChHhhhcC---ceEEEecCCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 021213 139 SGGVLAAEAG---TLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGIS 215 (316)
Q Consensus 139 ~~~~~~~~~g---~~~~~~~~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~ 215 (316)
+..+..+..+ ...+++|++++.+++++++|+.++++++++++.++|+..|+++|++.+..+++++|+..+|++.|+|
T Consensus 163 ~~~~G~A~~~~~~p~~Iv~G~~~~~~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l~e~~GiD 242 (431)
T 3ojo_A 163 RVLPGKILEELVHNNRIIGGVTKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANELTKICNNLNIN 242 (431)
T ss_dssp CCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHTTTCCSCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCcchhhcccCCCEEEEeCCHHHHHHHHHHHHHHhCCcEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 8544333222 3367888899999999999999998888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccCCccccccCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Q 021213 216 ASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKL 292 (316)
Q Consensus 216 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~ 292 (316)
++++.+.++.... + ..+.| .+|++..|+.||..++...+++.| ++++++.++.+..
T Consensus 243 ~~~v~~~~~~~~r--i--~~l~p--------------G~G~GG~C~pkD~~~L~~~a~~~~---~li~~~~~iN~~~ 298 (431)
T 3ojo_A 243 VLDVIEMANKHPR--V--NIHQP--------------GPGVGGHCLAVDPYFIIAKDPENA---KLIQTGREINNSM 298 (431)
T ss_dssp HHHHHHHHTTSTT--C--CCCCC--------------CSCCCCCCBCSCC---------CC---HHHHHHHHHHHTH
T ss_pred HHHHHHHHccCCC--c--ccCCC--------------CCCccccchhhhHHHHHHHHHHHh---HHHHHHHHHHHHh
Confidence 9999999875431 1 11111 235666888999999999999887 8888888766544
No 35
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.97 E-value=2.8e-31 Score=238.16 Aligned_cols=291 Identities=16% Similarity=0.134 Sum_probs=208.5
Q ss_pred CCCCCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCC--------------CCCcCCHHHHhhcCCEEE
Q 021213 1 MLFFDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMG--------------VPTKETPFEVAEASDVVI 66 (316)
Q Consensus 1 ~~~~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g--------------~~~~~~~~~~~~~adivi 66 (316)
|.+++|||+|||+|+||+++|..|+++||+|++|+|++++++.+++.+ +..++++.++++++|+||
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVi 104 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDIL 104 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEE
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEE
Confidence 344568999999999999999999999999999999999999888754 234578889999999999
Q ss_pred EeCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCC-HHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhh
Q 021213 67 TMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTID-PQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAA 145 (316)
Q Consensus 67 ~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~-~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~ 145 (316)
+|||.+. +++++.++.+.++ +++++|+++++. +.+ +.+.+.+.+.. + .....++..|.+......
T Consensus 105 laVp~~~--~~~vl~~i~~~l~-----~~~ivvs~~kGi~~~t-~~~se~i~~~l-----~-~~~~~vlsgP~~a~ev~~ 170 (356)
T 3k96_A 105 IVVPSFA--FHEVITRMKPLID-----AKTRIAWGTKGLAKGS-RLLHEVVATEL-----G-QVPMAVISGPSLATEVAA 170 (356)
T ss_dssp ECCCHHH--HHHHHHHHGGGCC-----TTCEEEECCCSCBTTT-BCHHHHHHHHH-----C-SCCEEEEESSCCHHHHHT
T ss_pred ECCCHHH--HHHHHHHHHHhcC-----CCCEEEEEeCCCCcCc-cCHHHHHHHHc-----C-CCCEEEEECccHHHHHHc
Confidence 9999764 8999987766653 456888877643 544 44555444321 0 012567888987655555
Q ss_pred hcCceEEEecCCHHHHHHHHHHHHhcCCCeEeeCCc-----------------chHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021213 146 EAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGA-----------------GNGAAAKICNNLTMAVSMLGVSEALTL 208 (316)
Q Consensus 146 ~~g~~~~~~~~~~~~~~~v~~ll~~~g~~v~~~g~~-----------------g~a~~~k~~~n~~~~~~~~~~~Ea~~l 208 (316)
...+..++.+.+.+..++++++|+..+.+++...++ |.+..+|+..|...+.+.++++|+.++
T Consensus 171 g~pt~~via~~~~~~~~~v~~lf~~~~~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~E~~~l 250 (356)
T 3k96_A 171 NLPTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRL 250 (356)
T ss_dssp TCCEEEEEEESCHHHHHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEecCCHHHHHHHHHHhCCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHH
Confidence 555556667789999999999999988888777663 344445777888888899999999999
Q ss_pred HHHcCCCHHHHHHHHhhccC--CccccccCCCCCCcc--cCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHH
Q 021213 209 GQSLGISASTLTKILNSSSA--RCWSSDSYNPVPGVM--EGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQ 284 (316)
Q Consensus 209 ~~~~G~~~~~~~~~~~~~~~--~s~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~ 284 (316)
+++.|+++++++++.+.++. ++.+...+++..+.. +|...+.-...-..+.+..++.+.+.++++++|+++|++++
T Consensus 251 ~~a~G~~~~t~~gl~g~gDl~~tc~s~~sRN~~~G~~l~~g~~~~~~~~~~~~~~eG~~t~~~~~~la~~~~v~~Pi~~~ 330 (356)
T 3k96_A 251 VSVFGGKQETLTGLAGLGDLVLTCTDNQSRNRRFGLALGEGVDKKEAQQAIGQAIEGLYNTDQVHALAQKHAIEMPLTFQ 330 (356)
T ss_dssp HHHTTCCHHHHTSTTTHHHHHHHHHCTTCHHHHHHHHHHHTCCHHHHHHHHCSCCSHHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred HHHhCCChHhhcccchhhHHHHhccCCCCccHHHHHHHHCCCCHHHHHHHcCCccchHHHHHHHHHHHHHcCCCCcHHHH
Confidence 99999999999876555542 222222222222211 11000000000023457889999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcHHHHHHHHhcC
Q 021213 285 AQDIYAKLCENGHDSKDFSCVFQHYYGG 312 (316)
Q Consensus 285 ~~~~~~~~~~~g~g~~d~~~~~~~~~~~ 312 (316)
+++++. ++.+....++.+..+
T Consensus 331 v~~il~-------~~~~~~~~~~~l~~r 351 (356)
T 3k96_A 331 VHRILH-------EDLDPQQAVQELLER 351 (356)
T ss_dssp HHHHHH-------SCCCHHHHHHHHHSC
T ss_pred HHHHHh-------CCCCHHHHHHHHHcC
Confidence 999884 556667777766544
No 36
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.97 E-value=1.6e-29 Score=233.58 Aligned_cols=265 Identities=13% Similarity=0.135 Sum_probs=197.7
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC-------------------C-CCCcCCHHHHhhcCCEE
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-------------------G-VPTKETPFEVAEASDVV 65 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~-------------------g-~~~~~~~~~~~~~adiv 65 (316)
|||+|||+|+||+++|..|+++||+|++|||++++++.+++. | +..++++++++++||+|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 589999999999999999999999999999999999888763 2 45567888888999999
Q ss_pred EEeCCCChh--------hHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHH-HHHHHHHHhhc-hhhhccCCCCCccEEe
Q 021213 66 ITMLPSSSH--------QVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQT-SRNISAAVSNC-ILKEKKDSWENPVMLD 135 (316)
Q Consensus 66 i~~vp~~~~--------~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~-~~~l~~~~~~~-~~~~~~g~~~~~~~~~ 135 (316)
|+|||++.+ .+++++..+.+.++. ..++++||+.||+.+++ .+.+.+.+.+. +.. .+ ..+.+..
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~--~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~--~~--~~~~v~~ 154 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVCREIGFAIRE--KSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKK--AG--VDFGVGT 154 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHHHHHHHHHTT--CCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCC--BT--TTBEEEE
T ss_pred EEEcCCCcccCCCcchHHHHHHHHHHHHHhcc--cCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcc--cC--CcEEEEE
Confidence 999998651 146666555444431 00167999999999988 67777776552 210 00 0123344
Q ss_pred ccCCCCh---HhhhcCceEEEecC-CHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021213 136 APVSGGV---LAAEAGTLTFMVGG-SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQS 211 (316)
Q Consensus 136 ~p~~~~~---~~~~~g~~~~~~~~-~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~ 211 (316)
.|..-.+ .........+++|+ +++..+.++++++.++.++++ ++.+.+.+.|++.|.+.+..+.+++|+..+|++
T Consensus 155 ~Pe~~~~G~~~~~~~~~~~iv~G~~~~~~~~~~~~l~~~~~~~v~~-~~~~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~ 233 (436)
T 1mv8_A 155 NPEFLRESTAIKDYDFPPMTVIGELDKQTGDLLEEIYRELDAPIIR-KTVEVAEMIKYTCNVWHAAKVTFANEIGNIAKA 233 (436)
T ss_dssp CCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTSSSCEEE-EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccccccchhccCCCEEEEEcCCHHHHHHHHHHHhccCCCEEc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554222 11112222556665 488899999999999986555 778999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHhhccCCccccccCCCCCCcccCCCCCCCCCC--CcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Q 021213 212 LGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGG--GFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIY 289 (316)
Q Consensus 212 ~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~ 289 (316)
.|++++++.+++..... +.. ..+.+.+ +++..++.||+.++.+.++++|+++|++++++++.
T Consensus 234 ~Gid~~~v~~~~~~~~r--~~~--------------~~~~~~pg~g~gg~~~~kD~~~l~~~a~~~g~~~pl~~~v~~in 297 (436)
T 1mv8_A 234 VGVDGREVMDVICQDHK--LNL--------------SRYYMRPGFAFGGSCLPKDVRALTYRASQLDVEHPMLGSLMRSN 297 (436)
T ss_dssp TTSCHHHHHHHHTTCTT--TTT--------------SSTTCSCCSCCCSSSHHHHHHHHHHHHHHTTCCCTTGGGHHHHH
T ss_pred hCCCHHHHHHHhcCCCC--CCC--------------cccCCCCcccccCcCcHhhHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 99999999998865210 100 0112223 56778999999999999999999999999999986
Q ss_pred HHHH
Q 021213 290 AKLC 293 (316)
Q Consensus 290 ~~~~ 293 (316)
+...
T Consensus 298 ~~~~ 301 (436)
T 1mv8_A 298 SNQV 301 (436)
T ss_dssp HHHH
T ss_pred hHhH
Confidence 6543
No 37
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.97 E-value=5.7e-29 Score=227.23 Aligned_cols=248 Identities=16% Similarity=0.110 Sum_probs=194.9
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCC------------------CCcCCHHHHhhcCCEEEE
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGV------------------PTKETPFEVAEASDVVIT 67 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~------------------~~~~~~~~~~~~adivi~ 67 (316)
|||+|||+|+||.++|..|++ ||+|++|||++++++.+++.+. ..++++.++++++|+||+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 589999999999999999999 9999999999999999987664 345677788889999999
Q ss_pred eCCCCh----------hhHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEecc
Q 021213 68 MLPSSS----------HQVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAP 137 (316)
Q Consensus 68 ~vp~~~----------~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p 137 (316)
|||++. . +++++..+.+ +. ++++||+.||+.|++.+.+.+.+.. ..++.+|
T Consensus 80 avpt~~~~~~~~~dl~~-v~~v~~~i~~-l~-----~~~iVV~~ST~~~g~~~~l~~~~~~------------~~v~~~P 140 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQH-VETVIKEVLS-VN-----SHATLIIKSTIPIGFITEMRQKFQT------------DRIIFSP 140 (402)
T ss_dssp CCCCCEETTTTEECCHH-HHHHHHHHHH-HC-----SSCEEEECSCCCTTHHHHHHHHTTC------------SCEEECC
T ss_pred ecCCCcccCCCCccHHH-HHHHHHHHHh-hC-----CCCEEEEeCCCCccHHHHHHHHhCC------------CeEEECC
Confidence 999873 3 7777766554 42 4568999999999999988876543 1456778
Q ss_pred CCCChHhhh---cCceEEEecCCH-------HHHHHHHHHHHh-cCC-C-eEeeCCcchHHHHHHHHHHHHHHHHHHHHH
Q 021213 138 VSGGVLAAE---AGTLTFMVGGSE-------DAYQAAKPLFLS-MGK-N-TIYCGGAGNGAAAKICNNLTMAVSMLGVSE 204 (316)
Q Consensus 138 ~~~~~~~~~---~g~~~~~~~~~~-------~~~~~v~~ll~~-~g~-~-v~~~g~~g~a~~~k~~~n~~~~~~~~~~~E 204 (316)
.+..+..+. .....+++|++. +..+.+.++|.. ... + +++.++.+.+++.|++.|.+.+..+.+++|
T Consensus 141 e~~~~G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE 220 (402)
T 1dlj_A 141 EFLRESKALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNE 220 (402)
T ss_dssp CCCCTTSTTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCcchhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 764433222 222246777765 667778888875 332 2 577888999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHhhccCCccccccCCCCCCcccCCCCCCCCCC--CcchhhHHHHHHHHHHHHHHcCCCCcHH
Q 021213 205 ALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGG--GFASKLMAKDLNLALASAKEVGVDCPLT 282 (316)
Q Consensus 205 a~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~kd~~~~~~~a~~~g~~~p~~ 282 (316)
+..+|++.|+|++++.+.++.+.. . . ...+.+ ||+..++.||+.++.+.++ |+++|++
T Consensus 221 ~~~l~~~~Gid~~~v~~~~~~~~r---i----~-----------~~~~~pg~g~gg~c~~kD~~~l~~~a~--~~~~~l~ 280 (402)
T 1dlj_A 221 LDTYAESRKLNSHMIIQGISYDDR---I----G-----------MHYNNPSFGYGGYSLPKDTKQLLANYN--NIPQTLI 280 (402)
T ss_dssp HHHHHHHTTCCHHHHHHHHHTSTT---T----C-----------SSSCCCCSSCCSSHHHHHHHHHHHHHT--TSSCSHH
T ss_pred HHHHHHHhCCCHHHHHHHhccCCC---C----C-----------cCCCCCCCccCCccHHhhHHHHHHHhc--CCChHHH
Confidence 999999999999999999876541 1 0 011223 5777899999999998884 8999999
Q ss_pred HHHHHHHHHHH
Q 021213 283 SQAQDIYAKLC 293 (316)
Q Consensus 283 ~~~~~~~~~~~ 293 (316)
+++.++.+...
T Consensus 281 ~~~~~~N~~~~ 291 (402)
T 1dlj_A 281 EAIVSSNNVRK 291 (402)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhH
Confidence 99998777654
No 38
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.96 E-value=5.4e-27 Score=213.45 Aligned_cols=264 Identities=16% Similarity=0.194 Sum_probs=200.5
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC--------------------CCCCcCCHHHHhhcCCEE
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM--------------------GVPTKETPFEVAEASDVV 65 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~--------------------g~~~~~~~~~~~~~adiv 65 (316)
.+|+|||+|++|.++|..|++.||+|+++|.++++++.+++. .+.++++..+++++||++
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad~~ 101 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATDAT 101 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSSEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCCce
Confidence 589999999999999999999999999999999999888642 134577888999999999
Q ss_pred EEeCCCChh--------hHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEecc
Q 021213 66 ITMLPSSSH--------QVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAP 137 (316)
Q Consensus 66 i~~vp~~~~--------~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p 137 (316)
|+|||++.. +++++.+.+.+.++. ..++++||..||+.|++++++...+.... ..+ ..+.+...|
T Consensus 102 ~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~--~~~g~lVV~eSTVppGtte~~~~~~l~~~---~~~--~~f~v~~~P 174 (444)
T 3vtf_A 102 FIAVGTPPAPDGSADLRYVEAAARAVGRGIRA--KGRWHLVVVKSTVPPGTTEGLVARAVAEE---AGG--VKFSVASNP 174 (444)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHHHHHHHHHHH--HCSCCEEEECSCCCTTTTTTHHHHHHHTT---TTT--CCCEEEECC
T ss_pred EEEecCCCCCCCCCCcHHHHHHHHHHHHHHhh--cCCCeEEEEeCCCCCchHHHHHHHHHHHh---CCC--CCceeecCc
Confidence 999987521 255555555445532 12467999999999999988765443221 111 125566778
Q ss_pred CC---CChHhhhcCceEEEec-CCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 021213 138 VS---GGVLAAEAGTLTFMVG-GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLG 213 (316)
Q Consensus 138 ~~---~~~~~~~~g~~~~~~~-~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G 213 (316)
.+ |...........+++| .+++..+.++++++.+...++++ +...|+..|++.|.+.+..+++++|...+|+++|
T Consensus 175 Erl~eG~a~~d~~~~~riViG~~~~~a~~~~~~ly~~~~~~~~~~-~~~~AE~~Kl~eN~~ravnIa~~NEla~ice~~G 253 (444)
T 3vtf_A 175 EFLREGSALEDFFKPDRIVIGAGDERAASFLLDVYKAVDAPKLVM-KPREAELVKYASNVFLALKISFANEVGLLAKRLG 253 (444)
T ss_dssp CCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHTTTSCSCEEEE-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccCCccccccccCCcEEEcCCCHHHHHHHHHHHhccCCCEEEe-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 76 4333333333355555 47778889999999988776555 5589999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhccCCccccccCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Q 021213 214 ISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLC 293 (316)
Q Consensus 214 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~ 293 (316)
+|..++.+.++.... +....+.| .+|++..|+.||..++...++++|++.++++++.++.+...
T Consensus 254 iDv~eV~~a~~~d~r--ig~~~l~P--------------G~G~GG~CipkD~~~L~~~a~~~g~~~~li~a~~~iN~~~~ 317 (444)
T 3vtf_A 254 VDTYRVFEAVGLDKR--IGRHYFGA--------------GLGFGGSCFPKDTLAFIRFGESLGLEMAISKAVLRVNEYMP 317 (444)
T ss_dssp CCHHHHHHHHHTSTT--SCSTTCCC--------------SSCCCTTTHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhccCCC--CCCCCCCC--------------CCCCCCcccCcCHHHHHHHHHhcCCCHHHHHhhHHHHHHHH
Confidence 999999999875321 11111111 34566799999999999999999999999999998776543
No 39
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.94 E-value=1.8e-27 Score=212.83 Aligned_cols=278 Identities=13% Similarity=0.140 Sum_probs=185.4
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCC-----------CCCcCCHHHHhhcCCEEEEeCCCC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMG-----------VPTKETPFEVAEASDVVITMLPSS 72 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g-----------~~~~~~~~~~~~~adivi~~vp~~ 72 (316)
|.|||+|||+|+||++++..|+++||+|++|+|++++++.+++.| +..++++.+ ++++|+||+|||+.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~~ 91 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPVQ 91 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCGG
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCHH
Confidence 578999999999999999999999999999999999999998866 355678888 88999999999964
Q ss_pred hhhHHHHhcCCCCcccCCCCCCCeEEEEcCC-CCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCce-
Q 021213 73 SHQVLDVYNGPNGLLQGGNSVRPQLLIDSST-IDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTL- 150 (316)
Q Consensus 73 ~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st-~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~- 150 (316)
. +++++..+.+ +++++|++++ ..+.+.+.+++.+.+.. + ....+...|... .....+..
T Consensus 92 -~-~~~v~~~l~~--------~~~~vv~~~nGi~~~~~~~l~~~~~~~~-----~--~~~~~~~~P~~~--~~~~~g~~~ 152 (335)
T 1z82_A 92 -Y-IREHLLRLPV--------KPSMVLNLSKGIEIKTGKRVSEIVEEIL-----G--CPYAVLSGPSHA--EEVAKKLPT 152 (335)
T ss_dssp -G-HHHHHTTCSS--------CCSEEEECCCCCCTTTCCCHHHHHHHHT-----C--CCEEEEESSCCH--HHHHTTCCE
T ss_pred -H-HHHHHHHhCc--------CCCEEEEEeCCCCCCccCcHHHHHHHHc-----C--CceEEEECCccH--HHHhCCCce
Confidence 3 8999876543 3458888885 45655556666665421 1 013445555442 22234443
Q ss_pred EEEecCCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHcC
Q 021213 151 TFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAK-----------------ICNNLTMAVSMLGVSEALTLGQSLG 213 (316)
Q Consensus 151 ~~~~~~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k-----------------~~~n~~~~~~~~~~~Ea~~l~~~~G 213 (316)
.+.++++. ++.++++|+..|.++++.++.-...|.| +..|...+....++.|+..++++.|
T Consensus 153 ~~~~g~~~--~~~~~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~a~G 230 (335)
T 1z82_A 153 AVTLAGEN--SKELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFG 230 (335)
T ss_dssp EEEEEETT--HHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEehh--HHHHHHHhCCCCEEEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHhC
Confidence 23344332 7889999999998877777643333433 3355555677889999999999999
Q ss_pred CCHHHHHHHHhhcc----CCccccccCCCCCCcccCCCCCCCC-CCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Q 021213 214 ISASTLTKILNSSS----ARCWSSDSYNPVPGVMEGVPASRNY-GGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDI 288 (316)
Q Consensus 214 ~~~~~~~~~~~~~~----~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~ 288 (316)
++++++.++...+. ..++....+...+.+..++..+ +. ...+...+..||++.++++++++|+++|++++++++
T Consensus 231 ~~~~~~~~l~~~~~~~~t~~s~~~~n~~~~~~~~~g~~~~-~~~~~~g~~~e~~~~~~~v~~~a~~~gv~~P~~~~v~~~ 309 (335)
T 1z82_A 231 ADQKTFMGLAGIGDLMVTCNSRYSRNRRFGELIARGFNPL-KLLESSNQVVEGAFTVKAVMKIAKENKIDMPISEEVYRV 309 (335)
T ss_dssp CCHHHHTSTTTHHHHHHHHHCTTCHHHHHHHHHHHTCCHH-HHHHTCSSCCTHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred CChhhhcccccccceeeeccCccCcHHHHHHHHhCCCCHH-HHHHhcCCeeeHHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 99988765421110 0011000000001111111000 00 001234467899999999999999999999999998
Q ss_pred HHHHHHcCCCCCcHHHHHHHHhc
Q 021213 289 YAKLCENGHDSKDFSCVFQHYYG 311 (316)
Q Consensus 289 ~~~~~~~g~g~~d~~~~~~~~~~ 311 (316)
++ ...+...+++.+..
T Consensus 310 ~~-------~~~~~~~~~~~l~~ 325 (335)
T 1z82_A 310 VY-------EGKPPLQSMRDLMR 325 (335)
T ss_dssp HH-------SCCCHHHHHHHHHC
T ss_pred Hh-------CCCCHHHHHHHHHc
Confidence 83 34666777777654
No 40
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.94 E-value=5.9e-27 Score=207.71 Aligned_cols=267 Identities=13% Similarity=0.129 Sum_probs=185.3
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCc------------CCHHHHhh---cCCEEEEeC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTK------------ETPFEVAE---ASDVVITML 69 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~------------~~~~~~~~---~adivi~~v 69 (316)
+|||+|||+|.||++++..|.++||+|++|+|++++.+.+++.|+... .+..++.+ ++|+||+|+
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v 82 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALT 82 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECS
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEe
Confidence 469999999999999999999999999999999999998887664322 13444444 899999999
Q ss_pred CCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCC--hHhhhc
Q 021213 70 PSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGG--VLAAEA 147 (316)
Q Consensus 70 p~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~--~~~~~~ 147 (316)
|.+. +++++..+.+.+. +++++|+++++.. ..+.+.+.++...+ . .+..+..++..++ ......
T Consensus 83 ~~~~--~~~v~~~l~~~l~-----~~~~iv~~~~g~~-~~~~l~~~~~~~~v---i---~g~~~~~~~~~~p~~~~~~~~ 148 (316)
T 2ew2_A 83 KAQQ--LDAMFKAIQPMIT-----EKTYVLCLLNGLG-HEDVLEKYVPKENI---L---VGITMWTAGLEGPGRVKLLGD 148 (316)
T ss_dssp CHHH--HHHHHHHHGGGCC-----TTCEEEECCSSSC-THHHHTTTSCGGGE---E---EEEECCCCEEEETTEEEECSC
T ss_pred cccc--HHHHHHHHHHhcC-----CCCEEEEecCCCC-cHHHHHHHcCCccE---E---EEEeeeeeEEcCCCEEEEecC
Confidence 9754 7888877655553 4568888876543 33455554443211 0 0122223333321 122334
Q ss_pred CceEEEe--cCCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHH---------------------HHHHHHHHH
Q 021213 148 GTLTFMV--GGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTM---------------------AVSMLGVSE 204 (316)
Q Consensus 148 g~~~~~~--~~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~---------------------~~~~~~~~E 204 (316)
+...+.. +++++..++++++|+..|.++++.++.+.+.|.|++.|... .....++.|
T Consensus 149 g~~~i~~~~~~~~~~~~~~~~ll~~~g~~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~E 228 (316)
T 2ew2_A 149 GEIELENIDPSGKKFALEVVDVFQKAGLNPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISE 228 (316)
T ss_dssp CCEEEEESSGGGHHHHHHHHHHHHHTTCCEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHHH
T ss_pred CcEEEeecCCCccHHHHHHHHHHHhCCCCcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHHH
Confidence 5544442 45788899999999999999888888999999999999642 456788999
Q ss_pred HHHHHHHcCCCH--HHHHHHHhhccCCccccccCCCCCCcccCCCCCCCC-CCCcchhhHHHHHHHHHHHHHHcCCCCcH
Q 021213 205 ALTLGQSLGISA--STLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNY-GGGFASKLMAKDLNLALASAKEVGVDCPL 281 (316)
Q Consensus 205 a~~l~~~~G~~~--~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~kd~~~~~~~a~~~g~~~p~ 281 (316)
+..++++.|+++ +.+.+.+............+ +.+. +|+ ..++..+ +.++++.++++++++|+++|+
T Consensus 229 ~~~la~~~G~~~~~~~~~~~~~~~~~~~~~~~~~---~sm~------~d~~~~g~~~E-~~~~~~~~~~~a~~~gv~~P~ 298 (316)
T 2ew2_A 229 FAAVAEKEAIYLDQAEVYTHIVQTYDPNGIGLHY---PSMY------QDLIKNHRLTE-IDYINGAVWRKGQKYNVATPF 298 (316)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHTTCTTTTTTSC---CHHH------HHHTTTCCCCS-GGGTHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHcCCCCChHHHHHHHHHHhccccCCCCC---cHHH------HHHHHcCCcch-HHHHhhHHHHHHHHhCCCCCH
Confidence 999999999986 46666665422110001111 1111 233 3344444 678999999999999999999
Q ss_pred HHHHHHHHHHHHHc
Q 021213 282 TSQAQDIYAKLCEN 295 (316)
Q Consensus 282 ~~~~~~~~~~~~~~ 295 (316)
++.++++++.....
T Consensus 299 ~~~~~~~~~~~~~~ 312 (316)
T 2ew2_A 299 CAMLTQLVHGKEEL 312 (316)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999887654
No 41
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.94 E-value=2.1e-27 Score=215.08 Aligned_cols=284 Identities=14% Similarity=0.104 Sum_probs=184.6
Q ss_pred eEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCC--------------CCCcCCHHHHhhcCCEEEEeCCCC
Q 021213 7 SVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMG--------------VPTKETPFEVAEASDVVITMLPSS 72 (316)
Q Consensus 7 ~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g--------------~~~~~~~~~~~~~adivi~~vp~~ 72 (316)
||+|||+|+||++++..|+++||+|++|+|++++++.+.+.+ +..++++.++++++|+||+|||..
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~~ 96 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQ 96 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCHH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCChH
Confidence 999999999999999999999999999999999998887643 334568888889999999999964
Q ss_pred hhhHHHHhcC----CCCcccCCCCCC-CeEEEEcCC-CCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhh
Q 021213 73 SHQVLDVYNG----PNGLLQGGNSVR-PQLLIDSST-IDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAE 146 (316)
Q Consensus 73 ~~~~~~v~~~----~~~~~~~~~~~~-~~~vi~~st-~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~ 146 (316)
. +++++.. +.+.+. + ++++|++++ ..+.+.+.+.+.+.+. .+. ....+...|.........
T Consensus 97 -~-~~~v~~~~~~gl~~~l~-----~~~~ivv~~~~gi~~~~~~~~~~~l~~~-----~~~-~~~~v~~gp~~~~~~~~g 163 (366)
T 1evy_A 97 -F-LRGFFEKSGGNLIAYAK-----EKQVPVLVCTKGIERSTLKFPAEIIGEF-----LPS-PLLSVLAGPSFAIEVATG 163 (366)
T ss_dssp -H-HHHHHHHHCHHHHHHHH-----HHTCCEEECCCSCCTTTCCCHHHHHTTT-----SCG-GGEEEEESSCCHHHHHTT
T ss_pred -H-HHHHHHHhHHHHHHhcC-----ccCCEEEEECCcCCCccccCHHHHHHHH-----CCC-CcEEEEeCCChHHHHHhC
Confidence 3 7888876 554442 3 568888884 4555444555555432 110 002344555442222222
Q ss_pred cCceEEEecCCHHHHHHHHHHHHhc--CCCeEeeCCcchHHHHHH-----------------HHHHHHHHHHHHHHHHHH
Q 021213 147 AGTLTFMVGGSEDAYQAAKPLFLSM--GKNTIYCGGAGNGAAAKI-----------------CNNLTMAVSMLGVSEALT 207 (316)
Q Consensus 147 ~g~~~~~~~~~~~~~~~v~~ll~~~--g~~v~~~g~~g~a~~~k~-----------------~~n~~~~~~~~~~~Ea~~ 207 (316)
.....++.+++.+..++++++|+.. +.++++.++.-...|.|+ .+|........++.|+..
T Consensus 164 ~~~~~~~~~~~~~~~~~v~~ll~~~g~g~~~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~~~~n~~~~~~~~~~~E~~~ 243 (366)
T 1evy_A 164 VFTCVSIASADINVARRLQRIMSTGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRD 243 (366)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHSCTTSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEecCCHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHHhHHHHHHHHHhhccCCccHHHHHHHHHHHHHHH
Confidence 2233445566888999999999999 777777777544445444 356666778899999999
Q ss_pred HHHHcCCCHHHHHHHHhhcc----CCccccccCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHH
Q 021213 208 LGQSLGISASTLTKILNSSS----ARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTS 283 (316)
Q Consensus 208 l~~~~G~~~~~~~~~~~~~~----~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~ 283 (316)
++++.|++++++.++...+. ..++....+...+++..++..+......+...++.||++.++++++++|+++|+++
T Consensus 244 la~a~Gi~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~~~~v~~~a~~~gv~~P~~~ 323 (366)
T 1evy_A 244 LTAALGGDGSAVFGLAGLGDLQLTCSSELSRNFTVGKKLGKGLPIEEIQRTSKAVAEGVATADPLMRLAKQLKVKMPLCH 323 (366)
T ss_dssp HHHHTTCCCTTTTSTTTHHHHHHHHTCTTSHHHHHHHHHHTTCCHHHHHC---CCCHHHHHHHHHHHHHHHHTCCCHHHH
T ss_pred HHHHhCCCCccccccccchhheeeecCCCCchHHHHHHHhCCCCHHHHHHHcCCeeehHHHHHHHHHHHHHhCCCCcHHH
Confidence 99999999876654311110 00111000000111111111000000012234678999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcHHHHHHHHh
Q 021213 284 QAQDIYAKLCENGHDSKDFSCVFQHYY 310 (316)
Q Consensus 284 ~~~~~~~~~~~~g~g~~d~~~~~~~~~ 310 (316)
.++++++. ..+...+++.+.
T Consensus 324 ~v~~~~~~-------~~~~~~~~~~l~ 343 (366)
T 1evy_A 324 QIYEIVYK-------KKNPRDALADLL 343 (366)
T ss_dssp HHHHHHHS-------CCCHHHHHHHHG
T ss_pred HHHHHHHC-------CCCHHHHHHHHH
Confidence 99998864 345555666554
No 42
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.93 E-value=3.4e-26 Score=203.07 Aligned_cols=261 Identities=10% Similarity=0.052 Sum_probs=174.0
Q ss_pred CCCCeEEEEccchhhHHHHHHHHhC-----C-CeEEEEeCChhHHHHHHh-CCCCCcC-------------CHHHHhhcC
Q 021213 3 FFDQSVGFIGLGNMGFRMASNLMKA-----G-YKMAVHDVNCNVMKMFSD-MGVPTKE-------------TPFEVAEAS 62 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~~la~~l~~~-----g-~~V~~~~r~~~~~~~l~~-~g~~~~~-------------~~~~~~~~a 62 (316)
-++|||+|||+|.||++++..|.++ | |+|++|+| +++.+.+++ .|+.... +..+.++++
T Consensus 6 ~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (317)
T 2qyt_A 6 QQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTV 84 (317)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCC
Confidence 3447999999999999999999999 9 99999999 888898988 7765432 344567889
Q ss_pred CEEEEeCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCC--
Q 021213 63 DVVITMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSG-- 140 (316)
Q Consensus 63 divi~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~-- 140 (316)
|+||+|||.+. +++++..+.+.+. ++++||+++++ .+..+.+.+.++... ...++.+.+++..+
T Consensus 85 D~vil~vk~~~--~~~v~~~i~~~l~-----~~~~iv~~~nG-~~~~~~l~~~l~~~~------v~~g~~~~~a~~~~pg 150 (317)
T 2qyt_A 85 DYILFCTKDYD--MERGVAEIRPMIG-----QNTKILPLLNG-ADIAERMRTYLPDTV------VWKGCVYISARKSAPG 150 (317)
T ss_dssp EEEEECCSSSC--HHHHHHHHGGGEE-----EEEEEEECSCS-SSHHHHHTTTSCTTT------BCEEEEEEEEEEEETT
T ss_pred CEEEEecCccc--HHHHHHHHHhhcC-----CCCEEEEccCC-CCcHHHHHHHCCCCc------EEEEEEEEEEEEcCCC
Confidence 99999999876 6888876665553 34578887664 344445555443321 11234566666653
Q ss_pred ChHhhhcCceEEEe----cCCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHH-------------------H
Q 021213 141 GVLAAEAGTLTFMV----GGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMA-------------------V 197 (316)
Q Consensus 141 ~~~~~~~g~~~~~~----~~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~-------------------~ 197 (316)
.......+...++. +++.+.. .++++|+..|.++++.++.+.+.|.|++.|.... .
T Consensus 151 ~~~~~~~g~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~~~ 229 (317)
T 2qyt_A 151 LITLEADRELFYFGSGLPEQTDDEV-RLAELLTAAGIRAYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHEPE 229 (317)
T ss_dssp EEEEEEEEEEEEEECCSSSCCHHHH-HHHHHHHHTTCCEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCHHH
T ss_pred EEEEcCCCceEEEcCCCCCCcCHHH-HHHHHHHHCCCCCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHHHH
Confidence 21222334333232 1246777 8999999999988889999999999999998754 3
Q ss_pred HHHHHHHHHHHHHHcCCCHH--HHHHHHhhccC-CccccccCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHH
Q 021213 198 SMLGVSEALTLGQSLGISAS--TLTKILNSSSA-RCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKE 274 (316)
Q Consensus 198 ~~~~~~Ea~~l~~~~G~~~~--~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~ 274 (316)
...++.|+..++++.|++++ .+.+.+..... .+.. ......++..++..+-++ .++.+++++++
T Consensus 230 ~~~~~~E~~~v~~a~G~~~~~~~~~~~~~~~~~~~~~~--~~sm~~d~~~g~~~E~~~-----------~~g~~~~~a~~ 296 (317)
T 2qyt_A 230 LLSLLEEVAELFRAKYGQVPDDVVQQLLDKQRKMPPES--TSSMHSDFLQGGSTEVET-----------LTGYVVREAEA 296 (317)
T ss_dssp HHHHHHHHHHHHHHHTSCCCSSHHHHHHHHHHHC----------------------CT-----------TTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCChHHHHHHHHHHhccCCCC--CChHHHHHHcCCccCHHH-----------HhhHHHHHHHH
Confidence 45899999999999999864 55665544210 0000 001122333333333222 24589999999
Q ss_pred cCCCCcHHHHHHHHHHHH
Q 021213 275 VGVDCPLTSQAQDIYAKL 292 (316)
Q Consensus 275 ~g~~~p~~~~~~~~~~~~ 292 (316)
+|+++|+++.++++++..
T Consensus 297 ~gv~~P~~~~~~~~~~~~ 314 (317)
T 2qyt_A 297 LRVDLPMYKRMYRELVSR 314 (317)
T ss_dssp TTCCCHHHHHHHHTTCC-
T ss_pred cCCCCCHHHHHHHHHHHH
Confidence 999999999999887543
No 43
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.92 E-value=9.4e-25 Score=195.25 Aligned_cols=280 Identities=14% Similarity=0.068 Sum_probs=186.9
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeC--ChhHHHHHHhCCC-----------CCcC--CHHHHhhcCCEEEEeCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDV--NCNVMKMFSDMGV-----------PTKE--TPFEVAEASDVVITMLP 70 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r--~~~~~~~l~~~g~-----------~~~~--~~~~~~~~adivi~~vp 70 (316)
|||+|||+|.||++++..|.++||+|++|+| ++++.+.+.+.|. ..++ ++.++++++|+||+|+|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 5899999999999999999999999999999 9999999888764 2344 67788889999999999
Q ss_pred CChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCC----CHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhh
Q 021213 71 SSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTI----DPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAE 146 (316)
Q Consensus 71 ~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~----~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~ 146 (316)
.+. +++++..+.+ +. +++++|+++++ .|++.+.+.+.+++. .|......+...|.. .....
T Consensus 81 ~~~--~~~v~~~i~~-l~-----~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~-----~g~~~~~~~~~~p~~--~~~~~ 145 (335)
T 1txg_A 81 TDG--VLPVMSRILP-YL-----KDQYIVLISKGLIDFDNSVLTVPEAVWRLK-----HDLRERTVAITGPAI--AREVA 145 (335)
T ss_dssp GGG--HHHHHHHHTT-TC-----CSCEEEECCCSEEEETTEEEEHHHHHHTTS-----TTCGGGEEEEESSCC--HHHHH
T ss_pred hHH--HHHHHHHHhc-CC-----CCCEEEEEcCcCccCCCCcCccHHHHHHHh-----cCCCCcEEEEECCCc--HHHHH
Confidence 875 7888877665 53 45688888744 344556666666542 010000122333432 22222
Q ss_pred cCc--eEEEecCCHHHHHHHHHHHHhcCCCeEeeCCcchHHHH-----------------HHH-----HHHHHHHHHHHH
Q 021213 147 AGT--LTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAA-----------------KIC-----NNLTMAVSMLGV 202 (316)
Q Consensus 147 ~g~--~~~~~~~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~-----------------k~~-----~n~~~~~~~~~~ 202 (316)
.+. ..++.+.+++..+.++++|+..|.++++.++.....|. |+. .|........++
T Consensus 146 ~g~~~~~~~~~~~~~~~~~~~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~ 225 (335)
T 1txg_A 146 KRMPTTVVFSSPSESSANKMKEIFETEYFGVEVTTDIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATRAI 225 (335)
T ss_dssp TTCCEEEEEECSCHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred ccCCcEEEEEeCCHHHHHHHHHHhCCCcEEEEecCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Confidence 233 33444557888999999999999888888886555554 566 677777788999
Q ss_pred HHHHHHHHHcCCCHHHHH------HHHhhccCCccccccCCCCCCcccCCCCCCCCCC-C--c-chhhHHHHHHHHHHHH
Q 021213 203 SEALTLGQSLGISASTLT------KILNSSSARCWSSDSYNPVPGVMEGVPASRNYGG-G--F-ASKLMAKDLNLALASA 272 (316)
Q Consensus 203 ~Ea~~l~~~~G~~~~~~~------~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~--~-~~~~~~kd~~~~~~~a 272 (316)
.|+..++++.|++++++. +.+..... +.... .. ..+..+.....+... + + ...+..+|++.+++++
T Consensus 226 ~E~~~la~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~--~~~~~~~s~~~d~~~~~~~~~~~~E~~~~~~~~~~~a 301 (335)
T 1txg_A 226 NEMAELIEILGGDRETAFGLSGFGDLIATFRG-GRNGM-LG--ELLGKGLSIDEAMEELERRGVGVVEGYKTAEKAYRLS 301 (335)
T ss_dssp HHHHHHHHHHTSCGGGGGSTTTHHHHHHTTTC-HHHHH-HH--HHHHTTCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCcchhhcccchhheeecccc-CccHH-HH--HHHhCCCCHHHHHHHhccCCceecchHHHHHHHHHHH
Confidence 999999999999988664 33332111 10000 00 000000000000000 0 0 2345669999999999
Q ss_pred HHcCCCCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhc
Q 021213 273 KEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYG 311 (316)
Q Consensus 273 ~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~ 311 (316)
+++|+++|+++.++++++. ..+...+++.+..
T Consensus 302 ~~~gv~~P~~~~~~~~~~~-------~~~~~~~~~~l~~ 333 (335)
T 1txg_A 302 SKINADTKLLDSIYRVLYE-------GLKVEEVLFELAT 333 (335)
T ss_dssp HHTTCCCHHHHHHHHHHHS-------CCCHHHHHHHHHT
T ss_pred HHcCCCCcHHHHHHHHHhC-------CCCHHHHHHHHHc
Confidence 9999999999999998864 2366666666653
No 44
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.92 E-value=2.5e-26 Score=201.36 Aligned_cols=251 Identities=11% Similarity=0.075 Sum_probs=172.6
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCC--------CcCCHHHHhhcCCEEEEeCCCChhhHH
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP--------TKETPFEVAEASDVVITMLPSSSHQVL 77 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~--------~~~~~~~~~~~adivi~~vp~~~~~~~ 77 (316)
|||+|||+|.||++++..|.++||+|++|+|++++.+.+...+.. ..++ .+.++++|+||+|+|.+. ++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~v~~~~--~~ 77 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAND-PDFLATSDLLLVTLKAWQ--VS 77 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESC-HHHHHTCSEEEECSCGGG--HH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecC-ccccCCCCEEEEEecHHh--HH
Confidence 589999999999999999999999999999998766554433211 1233 466789999999999875 78
Q ss_pred HHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCcc----EEeccCCCChHhhhcCceEEE
Q 021213 78 DVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPV----MLDAPVSGGVLAAEAGTLTFM 153 (316)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~----~~~~p~~~~~~~~~~g~~~~~ 153 (316)
+++.++.+.+. +++++|+++++. +..+.+.+.+++ + ..+.. +...| . ......+...+.
T Consensus 78 ~v~~~l~~~l~-----~~~~vv~~~~g~-~~~~~l~~~~~~--~------~~g~~~~~~~~~~p-~--~~~~~~g~~~i~ 140 (291)
T 1ks9_A 78 DAVKSLASTLP-----VTTPILLIHNGM-GTIEELQNIQQP--L------LMGTTTHAARRDGN-V--IIHVANGITHIG 140 (291)
T ss_dssp HHHHHHHTTSC-----TTSCEEEECSSS-CTTGGGTTCCSC--E------EEEEECCEEEEETT-E--EEEEECCCEEEE
T ss_pred HHHHHHHhhCC-----CCCEEEEecCCC-CcHHHHHHhcCC--e------EEEEEeEccEEcCC-E--EEEecccceEEc
Confidence 88876655443 456788876543 333334333221 0 00112 23344 2 233445654444
Q ss_pred e-cCCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHcCC
Q 021213 154 V-GGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTM------------------AVSMLGVSEALTLGQSLGI 214 (316)
Q Consensus 154 ~-~~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~------------------~~~~~~~~Ea~~l~~~~G~ 214 (316)
. +++.+.+++++++|+..|.++++.++.+.+.|.|++.|... ..+..++.|+..++++.|+
T Consensus 141 ~~~~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~~E~~~va~a~G~ 220 (291)
T 1ks9_A 141 PARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGH 220 (291)
T ss_dssp ESSGGGTTCTHHHHHHHTTSSCEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCcchHHHHHHHHHhcCCCCeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHHHHHHHHHHHcCC
Confidence 3 45567788999999999999989999999999999999987 6778999999999999999
Q ss_pred CH--HHH----HHHHhhcc-CCccccccCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHH
Q 021213 215 SA--STL----TKILNSSS-ARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQD 287 (316)
Q Consensus 215 ~~--~~~----~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~ 287 (316)
++ +.+ .+++..+. ..++. ..++..++..+.+ .+.+.++++++++|+++|+++.+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~ssm------~~d~~~g~~~e~~-----------~~~g~~~~~a~~~gv~~P~~~~~~~ 283 (291)
T 1ks9_A 221 HTSAEDLRDYVMQVIDATAENISSM------LQDIRALRHTEID-----------YINGFLLRRARAHGIAVPENTRLFE 283 (291)
T ss_dssp CCCHHHHHHHHHHHHHHTTTCCCHH------HHHHHTTCCCSGG-----------GTHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCCChH------HHHHHcCCccHHH-----------HHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 86 454 33332221 11111 1122222222211 3566899999999999999999999
Q ss_pred HHHHHH
Q 021213 288 IYAKLC 293 (316)
Q Consensus 288 ~~~~~~ 293 (316)
+++...
T Consensus 284 ~~~~~e 289 (291)
T 1ks9_A 284 MVKRKE 289 (291)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998654
No 45
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.92 E-value=7.1e-24 Score=182.80 Aligned_cols=249 Identities=14% Similarity=0.140 Sum_probs=182.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC-CCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-GVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~-g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
+|||+|||+|.||..++..|.+.|++|.+|||++++.+.+.+. |+..++++.++++++|+||+|+|.. . +++++..+
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~~~-~-~~~v~~~l 80 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQ-L-FETVLKPL 80 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSCGG-G-HHHHHTTS
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeCcH-h-HHHHHHHh
Confidence 3699999999999999999999999999999999999888764 8888889999999999999999944 3 78887654
Q ss_pred CCcccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecC--CHHH
Q 021213 84 NGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGG--SEDA 160 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~s-t~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~--~~~~ 160 (316)
. +++++|+.+ +..+. .+.+.++.. ..++. ++.+++.....+...++.++ +++.
T Consensus 81 ~---------~~~~vv~~~~~~~~~---~l~~~~~~~-----------~~~v~-~~p~~~~~~~~g~~~i~~~~~~~~~~ 136 (259)
T 2ahr_A 81 H---------FKQPIISMAAGISLQ---RLATFVGQD-----------LPLLR-IMPNMNAQILQSSTALTGNALVSQEL 136 (259)
T ss_dssp C---------CCSCEEECCTTCCHH---HHHHHHCTT-----------SCEEE-EECCGGGGGTCEEEEEEECTTCCHHH
T ss_pred c---------cCCEEEEeCCCCCHH---HHHHhcCCC-----------CCEEE-EcCCchHHHcCceEEEEcCCCCCHHH
Confidence 2 345888885 45554 344444321 23444 44455555556665566665 8899
Q ss_pred HHHHHHHHHhcCCCeEeeCCcchHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCcc-ccccCC
Q 021213 161 YQAAKPLFLSMGKNTIYCGGAGNGAAAKIC--NNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCW-SSDSYN 237 (316)
Q Consensus 161 ~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~--~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~-~~~~~~ 237 (316)
+++++++|+.+| .++++++.......++. .|.+.+.++..+.|+ +.+.|++++++.+++..+...++ ......
T Consensus 137 ~~~~~~ll~~~G-~~~~~~~~~~d~~~al~g~~~~~~~~~~~~la~~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~ 212 (259)
T 2ahr_A 137 QARVRDLTDSFG-STFDISEKDFDTFTALAGSSPAYIYLFIEALAKA---GVKNGIPKAKALEIVTQTVLASASNLKTSS 212 (259)
T ss_dssp HHHHHHHHHTTE-EEEECCGGGHHHHHHHHTTHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhCC-CEEEecHHHccHHHHHhccHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999 57888886677777764 344555555666666 88999999999999988765554 222122
Q ss_pred CCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Q 021213 238 PVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCE 294 (316)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~ 294 (316)
..|..+. ...+++++++..+.||+ ++.|++..+.+++.+.++++.+
T Consensus 213 ~~p~~l~----~~~~~p~~~~~~~~~~l-------~~~g~~~~~~~a~~~~~~r~~~ 258 (259)
T 2ahr_A 213 QSPHDFI----DAICSPGGTTIAGLMEL-------ERLGLTATVSSAIDKTIDKAKS 258 (259)
T ss_dssp SCHHHHH----HHHCCTTSHHHHHHHHH-------HHHTHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHH----HhCCCCChhHHHHHHHH-------HHCChHHHHHHHHHHHHHHHhc
Confidence 2233332 33467888888777777 4689999999999999988765
No 46
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.92 E-value=8.2e-25 Score=194.39 Aligned_cols=263 Identities=16% Similarity=0.184 Sum_probs=175.1
Q ss_pred CCCCCeEEEEccchhhHHHHHHHHhCC----CeEEEEeCChh--HHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhh
Q 021213 2 LFFDQSVGFIGLGNMGFRMASNLMKAG----YKMAVHDVNCN--VMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQ 75 (316)
Q Consensus 2 ~~~~~~IgiiG~G~mG~~la~~l~~~g----~~V~~~~r~~~--~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~ 75 (316)
+|.+|||+|||+|+||++|+..|.++| |+|++|+|+++ +++.+.+.|+..++++.++++++|+||+|||.. .
T Consensus 19 ~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~~~-~- 96 (322)
T 2izz_A 19 YFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVKPH-I- 96 (322)
T ss_dssp ---CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSCGG-G-
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeCHH-H-
Confidence 344579999999999999999999999 89999999986 788888889888889999999999999999954 4
Q ss_pred HHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEe-ccCCCChHhhhcCceEEEe
Q 021213 76 VLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLD-APVSGGVLAAEAGTLTFMV 154 (316)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~-~p~~~~~~~~~~g~~~~~~ 154 (316)
+++++.++.+.+. ++++||+++++.+. ..+.+.+.+.. + ...++. .|. .+.....+. ++++
T Consensus 97 ~~~vl~~l~~~l~-----~~~ivvs~s~gi~~--~~l~~~l~~~~-----~---~~~vv~~~p~--~p~~~~~g~-~v~~ 158 (322)
T 2izz_A 97 IPFILDEIGADIE-----DRHIVVSCAAGVTI--SSIEKKLSAFR-----P---APRVIRCMTN--TPVVVREGA-TVYA 158 (322)
T ss_dssp HHHHHHHHGGGCC-----TTCEEEECCTTCCH--HHHHHHHHTTS-----S---CCEEEEEECC--GGGGGTCEE-EEEE
T ss_pred HHHHHHHHHhhcC-----CCCEEEEeCCCCCH--HHHHHHHhhcC-----C---CCeEEEEeCC--cHHHHcCCe-EEEE
Confidence 8898876654442 45689998765542 34555554310 0 012222 221 222233443 5555
Q ss_pred cCC---HHHHHHHHHHHHhcCCCeEeeCCcchHHHHHH--HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCC
Q 021213 155 GGS---EDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKI--CNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSAR 229 (316)
Q Consensus 155 ~~~---~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~--~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~ 229 (316)
+++ ++.+++++++|+.+|.+++ +.+........+ ..|.+.+.++.++.|+ +.+.|++++.+.+++..+...
T Consensus 159 ~g~~~~~~~~~~v~~ll~~~G~~~~-~~e~~~~~~~a~~g~gpa~~~~~~eala~a---~~~~Gl~~~~a~~l~~~~~~g 234 (322)
T 2izz_A 159 TGTHAQVEDGRLMEQLLSSVGFCTE-VEEDLIDAVTGLSGSGPAYAFTALDALADG---GVKMGLPRRLAVRLGAQALLG 234 (322)
T ss_dssp ECTTCCHHHHHHHHHHHHTTEEEEE-CCGGGHHHHHHHTTTHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHhCCCEEE-eCHHHHHHHHHHhcCHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHH
Confidence 555 7889999999999998654 443223333332 2344444445555555 688999999999999886644
Q ss_pred ccccc-cCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCC
Q 021213 230 CWSSD-SYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDS 299 (316)
Q Consensus 230 s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~ 299 (316)
++... .....|..+. ...+.+++++. ..++.+++.|++.++.+++.+.++++.+.|.+.
T Consensus 235 ~~~~~~~~~~~p~~l~----~~v~sp~g~t~-------~~l~~l~~~g~~~~~~~av~~~~~ra~e~~~~~ 294 (322)
T 2izz_A 235 AAKMLLHSEQHPGQLK----DNVSSPGGATI-------HALHVLESGGFRSLLINAVEASCIRTRELQSMA 294 (322)
T ss_dssp HHHHHHHCSSCHHHHH----HHHCCTTSHHH-------HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHhcCCCHHHHH----HhCCCCCcHHH-------HHHHHHHHCCHHHHHHHHHHHHHHHHHHHhhcc
Confidence 33211 0111222221 12234554433 455677889999999999999999999876653
No 47
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.92 E-value=1.2e-24 Score=188.11 Aligned_cols=250 Identities=13% Similarity=0.123 Sum_probs=176.2
Q ss_pred CeEEEEccchhhHHHHHHHHhCC-CeEEEEeCChhHHHHHHhC-CCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAG-YKMAVHDVNCNVMKMFSDM-GVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g-~~V~~~~r~~~~~~~l~~~-g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
|||+|||+|.||.+++..|.++| |+|++|||++++.+.+.+. |+..+.++.+++ ++|+||+|+| +.. +++++..+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~-~~~v~~~l 77 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQD-MEAACKNI 77 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHH-HHHHHTTC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chh-HHHHHHHh
Confidence 68999999999999999999999 9999999999999888774 888777888888 9999999999 555 88888765
Q ss_pred CCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecC--CHHH
Q 021213 84 NGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGG--SEDA 160 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~--~~~~ 160 (316)
.+ . +++++++ ++..+ +.+.+.++. +.+++.. +.+++.....+...++.++ +++.
T Consensus 78 ~~-------~-~~ivv~~~~g~~~---~~l~~~~~~-----------~~~~v~~-~~~~~~~~~~g~~~i~~~~~~~~~~ 134 (263)
T 1yqg_A 78 RT-------N-GALVLSVAAGLSV---GTLSRYLGG-----------TRRIVRV-MPNTPGKIGLGVSGMYAEAEVSETD 134 (263)
T ss_dssp CC-------T-TCEEEECCTTCCH---HHHHHHTTS-----------CCCEEEE-ECCGGGGGTCEEEEEECCTTSCHHH
T ss_pred cc-------C-CCEEEEecCCCCH---HHHHHHcCC-----------CCcEEEE-cCCHHHHHcCceEEEEcCCCCCHHH
Confidence 32 1 4688988 55554 445554432 1345554 4444555556666666776 8899
Q ss_pred HHHHHHHHHhcCCCeEeeC-CcchHHHHHH--HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCcc-ccccC
Q 021213 161 YQAAKPLFLSMGKNTIYCG-GAGNGAAAKI--CNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCW-SSDSY 236 (316)
Q Consensus 161 ~~~v~~ll~~~g~~v~~~g-~~g~a~~~k~--~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~-~~~~~ 236 (316)
.+.++++|+.+|.++ +++ +.......-+ ..+.+.+..+..+.|+ +++.|++++++.+++..+...++ .....
T Consensus 135 ~~~~~~l~~~~g~~~-~~~~~~~~~~~~al~g~~~~~~~~~~~~l~e~---~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 210 (263)
T 1yqg_A 135 RRIADRIMKSVGLTV-WLDDEEKMHGITGISGSGPAYVFYLLDALQNA---AIRQGFDMAEARALSLATFKGAVALAEQT 210 (263)
T ss_dssp HHHHHHHHHTTEEEE-ECSSTTHHHHHHHHTTSHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEE-EeCChhhccHHHHHHccHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999876 777 5111111111 1122344455556666 88999999999998876554333 11111
Q ss_pred CCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcC
Q 021213 237 NPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENG 296 (316)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g 296 (316)
...|..+ ..+.+.+++++....+++ ++.|++.|+.+++++.++++.+.|
T Consensus 211 ~~~~~~~----~~~~~~~~~~~~~~l~~l-------~~~~~~~~~~~a~~~~~~~~~~~~ 259 (263)
T 1yqg_A 211 GEDFEKL----QKNVTSKGGTTHEAVEAF-------RRHRVAEAISEGVCACVRRSQEME 259 (263)
T ss_dssp CCCHHHH----HHHTCCTTSHHHHHHHHH-------HHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHH----HHhcCCCChhHHHHHHHH-------HHCCHHHHHHHHHHHHHHHHHHHH
Confidence 2112111 234577788777666555 779999999999999999998875
No 48
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.91 E-value=2.3e-25 Score=202.22 Aligned_cols=280 Identities=12% Similarity=0.075 Sum_probs=186.1
Q ss_pred CCeEEEEccchhhHHHHHHHHhCC-------CeEEEEeCChh-----HHHHHHhCC--------------CCCcCCHHHH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAG-------YKMAVHDVNCN-----VMKMFSDMG--------------VPTKETPFEV 58 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g-------~~V~~~~r~~~-----~~~~l~~~g--------------~~~~~~~~~~ 58 (316)
+|||+|||+|+||+++|..|+++| |+|++|+|+++ +++.+++.+ +..++++.++
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea 100 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASV 100 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHH
Confidence 368999999999999999999999 99999999988 888876632 3445678888
Q ss_pred hhcCCEEEEeCCCChhhHHHHhcCCCC----cccCCCCCCCeEEEEcCCC-CH--HHHHHHHHHHhhchhhhccCCCCCc
Q 021213 59 AEASDVVITMLPSSSHQVLDVYNGPNG----LLQGGNSVRPQLLIDSSTI-DP--QTSRNISAAVSNCILKEKKDSWENP 131 (316)
Q Consensus 59 ~~~adivi~~vp~~~~~~~~v~~~~~~----~~~~~~~~~~~~vi~~st~-~~--~~~~~l~~~~~~~~~~~~~g~~~~~ 131 (316)
++++|+||+|||++. +++++.++.+ .+. +++++|+++++ .+ .+.+.+.+.+.+. .+ ...
T Consensus 101 ~~~aDvVilav~~~~--~~~vl~~i~~~~~~~l~-----~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~-----~~--~~~ 166 (375)
T 1yj8_A 101 INDADLLIFIVPCQY--LESVLASIKESESIKIA-----SHAKAISLTKGFIVKKNQMKLCSNYISDF-----LN--IPC 166 (375)
T ss_dssp HTTCSEEEECCCHHH--HHHHHHHHTC---CCCC-----TTCEEEECCCSCEEETTEEECHHHHHHHH-----SS--SCE
T ss_pred HcCCCEEEEcCCHHH--HHHHHHHHhhhhhccCC-----CCCEEEEeCCccccCCccccCHHHHHHHH-----cC--CCE
Confidence 899999999999643 8999887655 443 45688888764 34 1223444444331 11 013
Q ss_pred cEEeccCCCChHhhhcCceEEEecCCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHH-----------------HHHH
Q 021213 132 VMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKIC-----------------NNLT 194 (316)
Q Consensus 132 ~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~-----------------~n~~ 194 (316)
.+...|..............++.+++++..++++++|+..+.++++.++.....|.|++ .|..
T Consensus 167 ~v~~gp~~a~~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~~~~~~~n~~ 246 (375)
T 1yj8_A 167 SALSGANIAMDVAMENFSEATIGGNDKDSLVIWQRVFDLPYFKINCVNETIEVEICGALKNIITLACGFCDGLNLPTNSK 246 (375)
T ss_dssp EEEECSCCHHHHHTTCCEEEEEECSCHHHHHHHHHHHCBTTEEEEEESCSHHHHHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred EEEeCCchHHHHHhCCCeEEEEecCCHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHHHHHHHHHHHhhccCChhHH
Confidence 34555544222222223334555678889999999999999888888876444555443 5666
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCHHHHHHH------HhhccCCccccccCCCCCCccc-CCCCCCCCCC------Ccchh
Q 021213 195 MAVSMLGVSEALTLGQSL--GISASTLTKI------LNSSSARCWSSDSYNPVPGVME-GVPASRNYGG------GFASK 259 (316)
Q Consensus 195 ~~~~~~~~~Ea~~l~~~~--G~~~~~~~~~------~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~ 259 (316)
.+....++.|+..++++. |++++++.++ +..... + ..+.....+.. +. ...+.. .+...
T Consensus 247 ~a~~~~~~~E~~~la~a~G~G~~~~~~~~~~g~~dl~~t~~~-~---~~~~~~~~~~~~g~--~~~~~d~~~~~~~g~~~ 320 (375)
T 1yj8_A 247 SAIIRNGINEMILFGKVFFQKFNENILLESCGFADIITSFLA-G---RNAKCSAEFIKSTP--KKTWEELENEILKGQKL 320 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCCGGGGGSTTTHHHHHHHHSS-S---SHHHHHHHHHHHTT--SSCHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcchhhccccccceeEeeeC-C---ccHHHHHHHHhcCC--CCCHHHHHHhhcCCcEe
Confidence 777899999999999999 6998877543 221111 0 00000000000 00 000110 03446
Q ss_pred hHHHHHHHHHHHHHHcCC--CCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhc
Q 021213 260 LMAKDLNLALASAKEVGV--DCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYG 311 (316)
Q Consensus 260 ~~~kd~~~~~~~a~~~g~--~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~ 311 (316)
++.+|++.++++++++|+ ++|+++.++++++. +.+...+++.+..
T Consensus 321 E~~~~~~~v~~~a~~~gv~~~~P~~~~v~~~~~~-------~~~~~~~~~~l~~ 367 (375)
T 1yj8_A 321 QGTVTLKYVYHMIKEKNMTNEFPLFTVLHKISFE-------NEDPSSLLKTFMN 367 (375)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGCHHHHHHHHHHHS-------CCCTTHHHHHHSS
T ss_pred eHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhC-------CCCHHHHHHHHHc
Confidence 788999999999999999 99999999988752 3445555665543
No 49
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.91 E-value=4.6e-25 Score=188.53 Aligned_cols=181 Identities=16% Similarity=0.226 Sum_probs=139.5
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhH--------------HHHHHh-CCCCCcCCHHHHhhcCCEEEEe
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNV--------------MKMFSD-MGVPTKETPFEVAEASDVVITM 68 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~--------------~~~l~~-~g~~~~~~~~~~~~~adivi~~ 68 (316)
..|||+|||+|.||++||..|+++||+|++|||++++ .+.+.+ .+...+.++.+++++||+||+|
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aDvVila 97 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAELVVNA 97 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCSEEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCCEEEEc
Confidence 4589999999999999999999999999999999987 555554 3556678899999999999999
Q ss_pred CCCChhhHHHHhcCC-CCcccCCCCCCCeEEEEcC-----------CCCHHHH----HHHHHHHhhchhhhccCCCCCcc
Q 021213 69 LPSSSHQVLDVYNGP-NGLLQGGNSVRPQLLIDSS-----------TIDPQTS----RNISAAVSNCILKEKKDSWENPV 132 (316)
Q Consensus 69 vp~~~~~~~~v~~~~-~~~~~~~~~~~~~~vi~~s-----------t~~~~~~----~~l~~~~~~~~~~~~~g~~~~~~ 132 (316)
+|.+. ..+++..+ .+.+ +++++||++ |..|.+. +.+.+.++...+ .+++.
T Consensus 98 vp~~~--~~~~~~~i~~~~l------~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~~~v------v~~~~ 163 (245)
T 3dtt_A 98 TEGAS--SIAALTAAGAENL------AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPEAKV------VKTLN 163 (245)
T ss_dssp SCGGG--HHHHHHHHCHHHH------TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTTSEE------EECST
T ss_pred cCcHH--HHHHHHHhhhhhc------CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCCCeE------EEeec
Confidence 99876 46666544 2222 456999999 3444333 334443332111 12367
Q ss_pred EEeccCCCChHhhhcCceEEEecC-CHHHHHHHHHHHHhcCC-CeEeeCCcchHHHHHHHHHHHHHHH
Q 021213 133 MLDAPVSGGVLAAEAGTLTFMVGG-SEDAYQAAKPLFLSMGK-NTIYCGGAGNGAAAKICNNLTMAVS 198 (316)
Q Consensus 133 ~~~~p~~~~~~~~~~g~~~~~~~~-~~~~~~~v~~ll~~~g~-~v~~~g~~g~a~~~k~~~n~~~~~~ 198 (316)
++++|+++++..+..+++.+++++ |++.++.++++|+.+|. .++++|+.|.+..+|+++|.+....
T Consensus 164 ~~~a~v~~~~~~a~~g~~~~~v~g~d~~~~~~v~~ll~~~g~~~~~~~G~~g~a~~~k~~~~~~~~l~ 231 (245)
T 3dtt_A 164 TMNASLMVDPGRAAGGDHSVFVSGNDAAAKAEVATLLKSLGHQDVIDLGDITTARGAEMLLPVWIRLW 231 (245)
T ss_dssp TSCHHHHHCGGGTGGGCCCEEEECSCHHHHHHHHHHHHHTTCCCEEEEESGGGHHHHHTTHHHHHHHH
T ss_pred ccCHHHhcCccccCCCCeeEEEECCCHHHHHHHHHHHHHcCCCceeccCcHHHHHHhhhhHHHHHHHH
Confidence 889999988877777777777755 68999999999999996 4689999999999999999987765
No 50
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.91 E-value=2.2e-24 Score=194.27 Aligned_cols=280 Identities=13% Similarity=0.074 Sum_probs=185.3
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCC-------CeEEEEeCChh-----HHHHHHhCC--------------CCCcCCHHH
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAG-------YKMAVHDVNCN-----VMKMFSDMG--------------VPTKETPFE 57 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g-------~~V~~~~r~~~-----~~~~l~~~g--------------~~~~~~~~~ 57 (316)
++|||+|||+|+||++++..|+++| |+|++|+|+++ +.+.+++.+ +..++++.+
T Consensus 7 ~~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (354)
T 1x0v_A 7 ASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQ 86 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHH
Confidence 3479999999999999999999999 99999999988 887776522 233567888
Q ss_pred HhhcCCEEEEeCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCC---HHHHHHHHHHHhhchhhhccCCCCCccEE
Q 021213 58 VAEASDVVITMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTID---PQTSRNISAAVSNCILKEKKDSWENPVML 134 (316)
Q Consensus 58 ~~~~adivi~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~ 134 (316)
+++++|+||+|+|... +++++.++.+.+. +++++|+++++. |.+.+.+.+.+.+.. + ....+.
T Consensus 87 ~~~~aD~Vilav~~~~--~~~v~~~i~~~l~-----~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~-----~--~~~~v~ 152 (354)
T 1x0v_A 87 AAEDADILIFVVPHQF--IGKICDQLKGHLK-----ANATGISLIKGVDEGPNGLKLISEVIGERL-----G--IPMSVL 152 (354)
T ss_dssp HHTTCSEEEECCCGGG--HHHHHHHHTTCSC-----TTCEEEECCCCBCSSSSSCCBHHHHHHHHH-----T--CCEEEE
T ss_pred HHcCCCEEEEeCCHHH--HHHHHHHHHhhCC-----CCCEEEEECCccCCCCCccccHHHHHHHHc-----C--CCEEEE
Confidence 8899999999999754 7888877665553 456888887743 232234444443210 1 002344
Q ss_pred eccCCCChHhhhcC--ceEEEecCCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHH-----------------HHHHH
Q 021213 135 DAPVSGGVLAAEAG--TLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKIC-----------------NNLTM 195 (316)
Q Consensus 135 ~~p~~~~~~~~~~g--~~~~~~~~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~-----------------~n~~~ 195 (316)
..|... .....+ ....+.+.+++..++++++|+..+.++++.++.....|.|++ .|...
T Consensus 153 ~gp~~a--~~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~g~~~~~~~~~n~~~ 230 (354)
T 1x0v_A 153 MGANIA--SEVADEKFCETTIGCKDPAQGQLLKELMQTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKA 230 (354)
T ss_dssp ECSCCH--HHHHTTCCEEEEEECSSHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred ECCCcH--HHHHhcCCceEEEEECCHHHHHHHHHHhCCCCEEEEEcCCchHhHHHHHHHHHHHHHHHHHHHccCCccHHH
Confidence 555432 222233 334455668889999999999999888888876555666655 56666
Q ss_pred HHHHHHHHHHHHHHHHcCC---CHHHHHHH------HhhccCCccccccCCCCCCccc-CCCCCCCCC---CCcchhhHH
Q 021213 196 AVSMLGVSEALTLGQSLGI---SASTLTKI------LNSSSARCWSSDSYNPVPGVME-GVPASRNYG---GGFASKLMA 262 (316)
Q Consensus 196 ~~~~~~~~Ea~~l~~~~G~---~~~~~~~~------~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~ 262 (316)
.....++.|+..++++.|+ +++++.++ +..... +.... ..+.+.. ++. ..+.. ..+...+..
T Consensus 231 ~~~~~~~~E~~~la~a~G~~~~~~~~~~~~~g~~d~~~~~~~-~~~~~---~~~~~~~~~~~-~~~~~~~~~~g~~~E~~ 305 (354)
T 1x0v_A 231 AVIRLGLMEMIAFAKLFCSGPVSSATFLESCGVADLITTCYG-GRNRK---VAEAFARTGKS-IEQLEKELLNGQKLQGP 305 (354)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCCGGGGGSTTTHHHHHHHHHH-CHHHH---HHHHHHHHCCC-HHHHHHHHSTTCCCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcccccccchHHHHHHhhcc-cccHH---HHHHHHhcCCC-HHHHHHhhcCCcEeehH
Confidence 7788999999999999999 88776432 211110 10000 0001110 100 00000 013345778
Q ss_pred HHHHHHHHHHHHcCC--CCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhc
Q 021213 263 KDLNLALASAKEVGV--DCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYG 311 (316)
Q Consensus 263 kd~~~~~~~a~~~g~--~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~ 311 (316)
+|++.++++++++|+ ++|+++.++++++.. .+...+++.+..
T Consensus 306 ~~~g~v~~~a~~~gv~~~~P~~~~v~~~~~~~-------~~~~~~~~~l~~ 349 (354)
T 1x0v_A 306 ETARELYSILQHKGLVDKFPLFMAVYKVCYEG-------QPVGEFIHCLQN 349 (354)
T ss_dssp HHHHHHHHHHHHHTCGGGSHHHHHHHHHHHSC-------CCGGGTHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHHHHHHHhCC-------CCHHHHHHHHHc
Confidence 999999999999999 999999999988532 255555555543
No 51
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.90 E-value=1e-23 Score=186.11 Aligned_cols=256 Identities=13% Similarity=0.102 Sum_probs=171.2
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh-----------CC--------------CCCcCCHHHHh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-----------MG--------------VPTKETPFEVA 59 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~-----------~g--------------~~~~~~~~~~~ 59 (316)
.+||+|||+|.||++||..|+++||+|++||+++++++.+.+ .| +..++++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav 85 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHH
Confidence 368999999999999999999999999999999998776642 33 34578899999
Q ss_pred hcCCEEEEeCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCC
Q 021213 60 EASDVVITMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVS 139 (316)
Q Consensus 60 ~~adivi~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~ 139 (316)
++||+||+|+|.+.+..+.++.++.+.++ +++++++.+++.+. ..+++.+.+. .+..| .||.++|..
T Consensus 86 ~~aDlVieavpe~~~~k~~v~~~l~~~~~-----~~~Ii~s~tS~i~~--~~la~~~~~~--~r~ig----~Hp~~P~~~ 152 (319)
T 2dpo_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVD-----DRVVLSSSSSCLLP--SKLFTGLAHV--KQCIV----AHPVNPPYY 152 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCC-----SSSEEEECCSSCCH--HHHHTTCTTG--GGEEE----EEECSSTTT
T ss_pred hcCCEEEEeccCCHHHHHHHHHHHHhhCC-----CCeEEEEeCCChHH--HHHHHhcCCC--CCeEE----eecCCchhh
Confidence 99999999999876523456665544442 45677655443322 2444443321 11222 677776543
Q ss_pred CChHhhhcCceEEEec--CCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Q 021213 140 GGVLAAEAGTLTFMVG--GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISAS 217 (316)
Q Consensus 140 ~~~~~~~~g~~~~~~~--~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~ 217 (316)
.+ ...++.+ ++++.+++++++++.+|+++++++..+.+.. +++++. ..++|++.++++.+++++
T Consensus 153 ~~-------lveiv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~~Gfi---~Nrll~----a~~~EA~~l~~~g~~~~~ 218 (319)
T 2dpo_A 153 IP-------LVELVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDGFV---LNRLQY----AIISEAWRLVEEGIVSPS 218 (319)
T ss_dssp CC-------EEEEEECTTCCHHHHHHHHHHHHHTTCEEEECSSCCTTTT---HHHHHH----HHHHHHHHHHHTTSSCHH
T ss_pred cc-------eEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEECCCcCCch---HHHHHH----HHHHHHHHHHHhCCCCHH
Confidence 22 2234555 5899999999999999999999975456653 355433 368899999999999999
Q ss_pred HHHHHHhhccCCccccccCCCCCCcccCCCCCCCCCCCcchhhHHHHH-HHHHHHHHHcCCCCcHHHHHHHHHHHHHHcC
Q 021213 218 TLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDL-NLALASAKEVGVDCPLTSQAQDIYAKLCENG 296 (316)
Q Consensus 218 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~-~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g 296 (316)
++.+++..+.+.+|... .|+. ..|+.+ .++..+.+.+ ....+..++.|-..++...+.+.+....+.-
T Consensus 219 ~id~a~~~g~g~~~a~~--GP~~--------~~dl~g-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (319)
T 2dpo_A 219 DLDLVMSDGLGMRYAFI--GPLE--------TMHLNA-EGMLSYSDRYSEGMKRVLKSFGSIPEFSGATVEKVNQAMCKK 287 (319)
T ss_dssp HHHHHHHTTHHHHHTTS--CHHH--------HHHHTT-TSHHHHHHHHHHHHHHHHHTCCCCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCcccc--CHHH--------HHHhcC-chHHHHHHHHhHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHh
Confidence 99999998776655421 2211 112222 2334444433 2356677788865566666666555555544
Q ss_pred CC
Q 021213 297 HD 298 (316)
Q Consensus 297 ~g 298 (316)
.+
T Consensus 288 ~~ 289 (319)
T 2dpo_A 288 VP 289 (319)
T ss_dssp SC
T ss_pred cC
Confidence 44
No 52
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.90 E-value=1.8e-23 Score=182.00 Aligned_cols=258 Identities=16% Similarity=0.170 Sum_probs=177.2
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCC---eEEEEeCChhHHHHHHhC-CCCCcCCHHHHhhcCCEEEEeCCCChhhHHHH
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGY---KMAVHDVNCNVMKMFSDM-GVPTKETPFEVAEASDVVITMLPSSSHQVLDV 79 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~---~V~~~~r~~~~~~~l~~~-g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v 79 (316)
++|||+|||+|+||++++..|.++|+ +|++|||++++.+.+.+. |+..+++..++++++|+||+|||... ++++
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p~~--~~~v 79 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKPHQ--IKMV 79 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCGGG--HHHH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCHHH--HHHH
Confidence 45799999999999999999999999 999999999999998875 88888899999999999999998644 7899
Q ss_pred hcCCCCc-ccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEec--C
Q 021213 80 YNGPNGL-LQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVG--G 156 (316)
Q Consensus 80 ~~~~~~~-~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~--~ 156 (316)
+.++.+. ++ +++++|+.+++.+ ...+.+.++.... .. ..+++.|.. ...+...+..+ .
T Consensus 80 l~~l~~~~l~-----~~~iiiS~~agi~--~~~l~~~l~~~~~--vv-----r~mPn~p~~-----v~~g~~~l~~~~~~ 140 (280)
T 3tri_A 80 CEELKDILSE-----TKILVISLAVGVT--TPLIEKWLGKASR--IV-----RAMPNTPSS-----VRAGATGLFANETV 140 (280)
T ss_dssp HHHHHHHHHT-----TTCEEEECCTTCC--HHHHHHHHTCCSS--EE-----EEECCGGGG-----GTCEEEEEECCTTS
T ss_pred HHHHHhhccC-----CCeEEEEecCCCC--HHHHHHHcCCCCe--EE-----EEecCChHH-----hcCccEEEEeCCCC
Confidence 8877665 53 3447776555443 2456666653110 00 123334432 22333223333 3
Q ss_pred CHHHHHHHHHHHHhcCCCeEeeC-C--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCcccc
Q 021213 157 SEDAYQAAKPLFLSMGKNTIYCG-G--AGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSS 233 (316)
Q Consensus 157 ~~~~~~~v~~ll~~~g~~v~~~g-~--~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~ 233 (316)
+++..+.++++|+.+|+ ++++. + ......+.-..+.+.+.++.++.|+ +.+.|+++++..+++.++..++...
T Consensus 141 ~~~~~~~v~~l~~~iG~-~~~v~~E~~~d~~talsgsgpa~~~~~~eal~~a---~v~~Gl~~~~a~~l~~~t~~G~a~~ 216 (280)
T 3tri_A 141 DKDQKNLAESIMRAVGL-VIWVSSEDQIEKIAALSGSGPAYIFLIMEALQEA---AEQLGLTKETAELLTEQTVLGAARM 216 (280)
T ss_dssp CHHHHHHHHHHHGGGEE-EEECSSHHHHHHHHHHTTSHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCC-eEEECCHHHhhHHHHHhccHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 68899999999999998 45553 3 1222222223345566666666676 7799999999999988875433221
Q ss_pred c-cCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCC
Q 021213 234 D-SYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGH 297 (316)
Q Consensus 234 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~ 297 (316)
- .....|..+. ++..+|+.++. ..++..++.|++..+.+++.+.++++.+.+.
T Consensus 217 ~~~~~~~p~~l~----~~v~spgGtT~-------~~l~~le~~g~~~~~~~av~aa~~r~~el~~ 270 (280)
T 3tri_A 217 ALETEQSVVQLR----QFVTSPGGTTE-------QAIKVLESGNLRELFIKALTAAVNRAKELSK 270 (280)
T ss_dssp HHTCSSCHHHHH----HHHCCTTSHHH-------HHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhcCCCHHHHH----HhccCCChHHH-------HHHHHHHHCChHHHHHHHHHHHHHHHHHHHH
Confidence 1 1111222221 34456665544 5677778999999999999999999988653
No 53
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.89 E-value=2.2e-22 Score=179.72 Aligned_cols=260 Identities=15% Similarity=0.159 Sum_probs=173.1
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCC-------------CcCCHHHHhhcCCEEEEeCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP-------------TKETPFEVAEASDVVITMLPS 71 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~-------------~~~~~~~~~~~adivi~~vp~ 71 (316)
+|||+|||+|.||+++|..|+++|++|++|+|+ ++.+.+++.|.. .++++++ ++++|+||+|||.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~ 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA 80 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc
Confidence 479999999999999999999999999999996 677888877643 2356666 5889999999998
Q ss_pred ChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCCH------------------HHHHHHHHHHhhchhhhccCCCCCccE
Q 021213 72 SSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDP------------------QTSRNISAAVSNCILKEKKDSWENPVM 133 (316)
Q Consensus 72 ~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~------------------~~~~~l~~~~~~~~~~~~~g~~~~~~~ 133 (316)
.. +++++..+.+.+. ++++||.+.++.+ +..+.+.+.++...+. . ++.+
T Consensus 81 ~~--~~~~~~~l~~~l~-----~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~v~--~----gv~~ 147 (335)
T 3ghy_A 81 PA--LESVAAGIAPLIG-----PGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTRHVL--G----CVVH 147 (335)
T ss_dssp HH--HHHHHGGGSSSCC-----TTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGGGEE--E----EEEC
T ss_pred hh--HHHHHHHHHhhCC-----CCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcccEE--E----EEEE
Confidence 54 8899988777663 4567887777631 2233455555432210 0 0111
Q ss_pred EeccCCCChHhhhcCceEEEec----CCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHH---------------
Q 021213 134 LDAPVSGGVLAAEAGTLTFMVG----GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLT--------------- 194 (316)
Q Consensus 134 ~~~p~~~~~~~~~~g~~~~~~~----~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~--------------- 194 (316)
..+...++-.....+...+.+| .+.+..+.+.++|+..+.++++..++-...|.|++.|..
T Consensus 148 ~~a~~~~pg~v~~~~~g~~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~na~~N~l~al~~~~~g~~ 227 (335)
T 3ghy_A 148 LTCATVSPGHIRHGNGRRLILGEPAGGASPRLASIAALFGRAGLQAECSEAIQRDIWFKLWGNMTMNPVSVLTGATCDRI 227 (335)
T ss_dssp CCEEESSTTEEEECSCCEEEEECTTCSCCHHHHHHHHHHHHTTCEEEECSCHHHHHHHHHHTTTTHHHHHHHHCCCHHHH
T ss_pred EEEEEcCCcEEEECCCCeEEEecCCCCcCHHHHHHHHHHHhCCCCcEeCchHHHHHHHHHHHHhhhhHHHHHhCCChHHH
Confidence 1111111111111112233443 245677899999999998888888888889999776643
Q ss_pred ------HHHHHHHHHHHHHHHHHcCCCH----HHHHHHHhhccCCccccccCCCCCCcccCC-CCCCCCCCCcchhhHHH
Q 021213 195 ------MAVSMLGVSEALTLGQSLGISA----STLTKILNSSSARCWSSDSYNPVPGVMEGV-PASRNYGGGFASKLMAK 263 (316)
Q Consensus 195 ------~~~~~~~~~Ea~~l~~~~G~~~----~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~k 263 (316)
...+..++.|+..++++.|+++ +........... ...++..++..|+ +.+-++..|
T Consensus 228 ~~~~~~~~l~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~-----~~sSM~qD~~~gr~~tEid~i~G-------- 294 (335)
T 3ghy_A 228 LDDPLVSAFCLAVMAEAKAIGARIGCPIEQSGEARSAVTRQLGA-----FKTSMLQDAEAGRGPLEIDALVA-------- 294 (335)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHTTTCCCCSCHHHHHHHHHTTCS-----CCCTTTC-----CCCCCHHHHTH--------
T ss_pred hcChHHHHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHhccCC-----CCcHHHHHHHcCCCCchHHHHhh--------
Confidence 2345678999999999999753 334444333211 1123445666666 666555544
Q ss_pred HHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc
Q 021213 264 DLNLALASAKEVGVDCPLTSQAQDIYAKLCEN 295 (316)
Q Consensus 264 d~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~ 295 (316)
.++++++++|+++|+++.++++++.....
T Consensus 295 ---~vv~~a~~~gv~~P~~~~l~~li~~~e~~ 323 (335)
T 3ghy_A 295 ---SVREIGLHVGVPTPQIDTLLGLVRLHAQT 323 (335)
T ss_dssp ---HHHHHHHHHTCCCHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Confidence 89999999999999999999999886664
No 54
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.89 E-value=8.3e-22 Score=168.59 Aligned_cols=230 Identities=17% Similarity=0.230 Sum_probs=141.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC----eEEEEeCChhHHHHHHh-CCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY----KMAVHDVNCNVMKMFSD-MGVPTKETPFEVAEASDVVITMLPSSSHQVLDV 79 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~----~V~~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v 79 (316)
+|||+|||+|+||.+++..|.++|| +|++|||++++++.+.+ .|+..+.++.++++++|+||+|+|... ++++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~~~--~~~v 79 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKPDL--YASI 79 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCTTT--HHHH
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCHHH--HHHH
Confidence 4799999999999999999999998 99999999999998875 588888999999999999999997654 7899
Q ss_pred hcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEec--C
Q 021213 80 YNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVG--G 156 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~--~ 156 (316)
+.++.+.++ +++++|.. ++.+.. .+.+.+.... +.. ..+++.|...+ .+...++.+ +
T Consensus 80 ~~~l~~~l~-----~~~~vvs~~~gi~~~---~l~~~~~~~~--~~v-----~~~p~~p~~~~-----~g~~~~~~~~~~ 139 (247)
T 3gt0_A 80 INEIKEIIK-----NDAIIVTIAAGKSIE---STENAFNKKV--KVV-----RVMPNTPALVG-----EGMSALCPNEMV 139 (247)
T ss_dssp C---CCSSC-----TTCEEEECSCCSCHH---HHHHHHCSCC--EEE-----EEECCGGGGGT-----CEEEEEEECTTC
T ss_pred HHHHHhhcC-----CCCEEEEecCCCCHH---HHHHHhCCCC--cEE-----EEeCChHHHHc-----CceEEEEeCCCC
Confidence 887766553 45577744 444443 4445543210 000 12345555432 244344443 6
Q ss_pred CHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHhhccCCccccc-
Q 021213 157 SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTL-GQSLGISASTLTKILNSSSARCWSSD- 234 (316)
Q Consensus 157 ~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l-~~~~G~~~~~~~~~~~~~~~~s~~~~- 234 (316)
+++.+++++++|+.+|+ ++++++........+..... .++..+.|++.. +.+.|++++++.+++..+...++..-
T Consensus 140 ~~~~~~~~~~l~~~~G~-~~~~~e~~~d~~~a~~g~gp--a~~~~~~eal~~a~~~~Gl~~~~a~~~~~~~~~gs~~~~~ 216 (247)
T 3gt0_A 140 TEKDLEDVLNIFNSFGQ-TEIVSEKLMDVVTSVSGSSP--AYVYMIIEAMADAAVLDGMPRNQAYKFAAQAVLGSAKMVL 216 (247)
T ss_dssp CHHHHHHHHHHHGGGEE-EEECCGGGHHHHHHHHHHHH--HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCC-EEEeCHHHccHHHHHhccHH--HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999998 66776532222222222211 233455666655 88999999999999998876554431
Q ss_pred cCCCCCCcccCCCCCCCCCCCcchhhHHH
Q 021213 235 SYNPVPGVMEGVPASRNYGGGFASKLMAK 263 (316)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 263 (316)
.....|..+ .++..+|+.++....+
T Consensus 217 ~~~~~p~~l----~~~v~spgG~t~~gl~ 241 (247)
T 3gt0_A 217 ETGIHPGEL----KDMVCSPGGTTIEAVA 241 (247)
T ss_dssp HSCC-------------------------
T ss_pred HcCCCHHHH----HHhcCCCCchHHHHHH
Confidence 112233333 3456677766654443
No 55
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.89 E-value=1.8e-22 Score=178.67 Aligned_cols=266 Identities=12% Similarity=0.074 Sum_probs=172.4
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCC--------------CcCCHHHHhhcCCEEEEeC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP--------------TKETPFEVAEASDVVITML 69 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~--------------~~~~~~~~~~~adivi~~v 69 (316)
|+|||+|||+|.||++++..|+++|++|++|+|++ .+.+++.|+. .++++++ ++.+|+||+||
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vilav 77 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVGL 77 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEECC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEec
Confidence 45799999999999999999999999999999986 4777776532 2245544 67899999999
Q ss_pred CCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCc
Q 021213 70 PSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGT 149 (316)
Q Consensus 70 p~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~ 149 (316)
|... +++++..+++.+. ++++||.+.++. +..+.+.+.++...+. .++.+..+-..++-.....+.
T Consensus 78 k~~~--~~~~l~~l~~~l~-----~~~~iv~l~nGi-~~~~~l~~~~~~~~v~------~~~~~~~a~~~~p~~v~~~~~ 143 (312)
T 3hn2_A 78 KTFA--NSRYEELIRPLVE-----EGTQILTLQNGL-GNEEALATLFGAERII------GGVAFLCSNRGEPGEVHHLGA 143 (312)
T ss_dssp CGGG--GGGHHHHHGGGCC-----TTCEEEECCSSS-SHHHHHHHHTCGGGEE------EEEEEEECCBCSSSEEEECEE
T ss_pred CCCC--cHHHHHHHHhhcC-----CCCEEEEecCCC-CcHHHHHHHCCCCcEE------EEEEEeeeEEcCCcEEEECCC
Confidence 9876 6888887776663 345677666554 2235666666543210 112222222222111111122
Q ss_pred eEEEec----CCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHH---------------------HHHHHHH
Q 021213 150 LTFMVG----GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAV---------------------SMLGVSE 204 (316)
Q Consensus 150 ~~~~~~----~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~---------------------~~~~~~E 204 (316)
..+.+| .+.+..+.+.++|+..+.++++..++-...|-|++.|...+. +..++.|
T Consensus 144 g~~~ig~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~~~~~~l~~~~~~E 223 (312)
T 3hn2_A 144 GRIILGEFLPRDTGRIEELAAMFRQAGVDCRTTDDLKRARWEKLVWNIPFNGLCALLQQPVNLILARDVSRKLVRGIMLE 223 (312)
T ss_dssp EEEEEEESSCCCSHHHHHHHHHHHHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSHHHHHHHHHHHHH
T ss_pred CeEEEecCCCCccHHHHHHHHHHHhCCCCcEEChHHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhChhHHHHHHHHHHH
Confidence 233343 245677899999999999888888888999999998875432 3568889
Q ss_pred HHHHHHHcC--CC--HHHHHHHHhhccCCccccccCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCc
Q 021213 205 ALTLGQSLG--IS--ASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCP 280 (316)
Q Consensus 205 a~~l~~~~G--~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p 280 (316)
+.+++++.| ++ .+....++......+.. ..++..++..|++.+-++..| .++++++++|+++|
T Consensus 224 ~~~va~a~G~~~~~~~~~~~~~~~~~~~~~~~--~sSM~qD~~~gr~tEid~i~G-----------~vv~~a~~~gv~~P 290 (312)
T 3hn2_A 224 VIAGANAQGLATFIADGYVDDMLEFTDAMGEY--KPSMEIDREEGRPLEIAAIFR-----------TPLAYGAREGIAMP 290 (312)
T ss_dssp HHHHHHTSCCSSCCCTTHHHHHHHHHTTSCSC--CCHHHHHHHTTCCCCHHHHTH-----------HHHHHHHHTTCCCH
T ss_pred HHHHHHHcCCccCCCHHHHHHHHHHHhcCCCC--CchHHHHHHhCCCccHHHHhh-----------HHHHHHHHhCCCCC
Confidence 999999999 64 22222222221111111 112234445555555555444 89999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCC
Q 021213 281 LTSQAQDIYAKLCENGHDS 299 (316)
Q Consensus 281 ~~~~~~~~~~~~~~~g~g~ 299 (316)
+++.++++++.....|+.+
T Consensus 291 ~~~~l~~ll~~~~~~~~~~ 309 (312)
T 3hn2_A 291 RVEMLATLLEQATGEGHHH 309 (312)
T ss_dssp HHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHHHhccccc
Confidence 9999999999888777643
No 56
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.89 E-value=9.9e-23 Score=178.15 Aligned_cols=201 Identities=14% Similarity=0.171 Sum_probs=155.8
Q ss_pred CCeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 5 DQSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 5 ~~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
+|||+|||+ |.||++++..|.++||+|++|||++++.+.+.+.|+... ++.++++++|+||+|+|.+. +++++.++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~aDvVi~av~~~~--~~~v~~~l 87 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLT-DGDGWIDEADVVVLALPDNI--IEKVAEDI 87 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCC-CSSGGGGTCSEEEECSCHHH--HHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcC-CHHHHhcCCCEEEEcCCchH--HHHHHHHH
Confidence 469999999 999999999999999999999999999988888776654 67788899999999999765 78888765
Q ss_pred CCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEE-eccCCCCh------HhhhcCc-------
Q 021213 84 NGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVML-DAPVSGGV------LAAEAGT------- 149 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~-~~p~~~~~------~~~~~g~------- 149 (316)
.+.++ ++++++++|+..+. ..+.+ + ..+..|+ .+|.+++. .....+.
T Consensus 88 ~~~l~-----~~~ivv~~s~~~~~--~~l~~-~-----------~~~~~~v~~~P~~~~~~~~~~~~~~~~g~l~~~~~~ 148 (286)
T 3c24_A 88 VPRVR-----PGTIVLILDAAAPY--AGVMP-E-----------RADITYFIGHPCHPPLFNDETDPAARTDYHGGIAKQ 148 (286)
T ss_dssp GGGSC-----TTCEEEESCSHHHH--HTCSC-C-----------CTTSEEEEEEECCSCSSCCCCSHHHHTCSSSSSSCE
T ss_pred HHhCC-----CCCEEEECCCCchh--HHHHh-h-----------hCCCeEEecCCCCccccccccchhhccCcccccccc
Confidence 54442 46799997776532 22221 1 1125677 88888766 4455563
Q ss_pred eEE--EecCCHHHHHHHHHHHHhcCC---CeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHH
Q 021213 150 LTF--MVGGSEDAYQAAKPLFLSMGK---NTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQ-SLGISASTLTKIL 223 (316)
Q Consensus 150 ~~~--~~~~~~~~~~~v~~ll~~~g~---~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~-~~G~~~~~~~~~~ 223 (316)
..+ ..+++++..++++++|+.+|. +++++++.+.+...|.+.|.....++..+.|++..+. +.|++++++.+++
T Consensus 149 ~~i~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~Gl~~~~~~~~~ 228 (286)
T 3c24_A 149 AIVCALMQGPEEHYAIGADICETMWSPVTRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQAALDFM 228 (286)
T ss_dssp EEEEEEEESCTHHHHHHHHHHHHHTCSEEEEEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred eeeeeccCCCHHHHHHHHHHHHHhcCCcceEEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 222 245788999999999999998 7889987767777699998877788888999886654 5599999999988
Q ss_pred hhcc
Q 021213 224 NSSS 227 (316)
Q Consensus 224 ~~~~ 227 (316)
..+.
T Consensus 229 ~~~~ 232 (286)
T 3c24_A 229 IGHL 232 (286)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 57
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.89 E-value=3.4e-23 Score=180.00 Aligned_cols=190 Identities=14% Similarity=0.170 Sum_probs=143.0
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC-------CCCCcCCHHHHhhcCCEEEEeCCCChhhHH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-------GVPTKETPFEVAEASDVVITMLPSSSHQVL 77 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~-------g~~~~~~~~~~~~~adivi~~vp~~~~~~~ 77 (316)
.+||+|||+|.||..||.+|+ +||+|++|||++++++.+.+. +++.++|+++ +++||+||.|+|++.+ ++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~-vk 88 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLN-TK 88 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHH-HH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHH-HH
Confidence 379999999999999999999 999999999999999888776 6777788876 7899999999999987 66
Q ss_pred HHhc-CCCCcccCCCCCCCeEE-EEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEec
Q 021213 78 DVYN-GPNGLLQGGNSVRPQLL-IDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVG 155 (316)
Q Consensus 78 ~v~~-~~~~~~~~~~~~~~~~v-i~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~ 155 (316)
..+. ++.. . ++.++ .|+||.++..... .+.+ +.+..| .||++ |+... ....++.+
T Consensus 89 ~~l~~~l~~------~-~~~IlasntSti~~~~~a~---~~~~--~~r~~G----~Hf~~-Pv~~~------~lveiv~g 145 (293)
T 1zej_A 89 VEVLREVER------L-TNAPLCSNTSVISVDDIAE---RLDS--PSRFLG----VHWMN-PPHVM------PLVEIVIS 145 (293)
T ss_dssp HHHHHHHHT------T-CCSCEEECCSSSCHHHHHT---TSSC--GGGEEE----EEECS-STTTC------CEEEEEEC
T ss_pred HHHHHHHhc------C-CCCEEEEECCCcCHHHHHH---Hhhc--ccceEe----EEecC-ccccC------CEEEEECC
Confidence 6653 2222 2 34455 4788888863322 2211 111233 78888 44332 12234444
Q ss_pred --CCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCcc
Q 021213 156 --GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCW 231 (316)
Q Consensus 156 --~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~ 231 (316)
++++.+++++++++.+|++++++++. +++++++. ..++|++.++++ |++++++.+++..+.+.++
T Consensus 146 ~~t~~~~~~~~~~l~~~lGk~~v~v~d~------fi~Nrll~----~~~~EA~~l~~~-Gv~~e~id~~~~~g~g~~~ 212 (293)
T 1zej_A 146 RFTDSKTVAFVEGFLRELGKEVVVCKGQ------SLVNRFNA----AVLSEASRMIEE-GVRAEDVDRVWKHHLGLLY 212 (293)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEESS------CHHHHHHH----HHHHHHHHHHHH-TCCHHHHHHHHHTTHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCeEEEeccc------ccHHHHHH----HHHHHHHHHHHh-CCCHHHHHHHHHhcCCCCC
Confidence 38999999999999999999999874 66666644 468999999999 8899999999987665443
No 58
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.88 E-value=6.7e-22 Score=175.32 Aligned_cols=256 Identities=13% Similarity=0.191 Sum_probs=174.7
Q ss_pred CCCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCC-------------CCcCCHHHHhhcCCEEEEeC
Q 021213 3 FFDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGV-------------PTKETPFEVAEASDVVITML 69 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~-------------~~~~~~~~~~~~adivi~~v 69 (316)
+.+|||+|||+|.||+++|..|+++||+|++| +++++++.+++.|. ..++++++ ++++|+||+||
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vilav 94 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFCV 94 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEECC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEEc
Confidence 44689999999999999999999999999999 88999998887653 22345544 57899999999
Q ss_pred CCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCC--hHhhhc
Q 021213 70 PSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGG--VLAAEA 147 (316)
Q Consensus 70 p~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~--~~~~~~ 147 (316)
|... +++++..+.+.+. ++++||.++++... .+.+.+.++ ..+ .. +..+..+...++ ......
T Consensus 95 k~~~--~~~~l~~l~~~l~-----~~~~iv~~~nGi~~-~~~l~~~~~-~~v--l~----g~~~~~a~~~gP~~~~~~~~ 159 (318)
T 3hwr_A 95 KSTD--TQSAALAMKPALA-----KSALVLSLQNGVEN-ADTLRSLLE-QEV--AA----AVVYVATEMAGPGHVRHHGR 159 (318)
T ss_dssp CGGG--HHHHHHHHTTTSC-----TTCEEEEECSSSSH-HHHHHHHCC-SEE--EE----EEEEEEEEEEETTEEEEEEE
T ss_pred cccc--HHHHHHHHHHhcC-----CCCEEEEeCCCCCc-HHHHHHHcC-CcE--EE----EEEEEeEEEcCCeEEEEcCC
Confidence 9874 8999887776663 44577766655432 245666553 211 00 111111111111 111122
Q ss_pred CceEEEecCCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHH---------------------HHHHHHHHH
Q 021213 148 GTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAV---------------------SMLGVSEAL 206 (316)
Q Consensus 148 g~~~~~~~~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~---------------------~~~~~~Ea~ 206 (316)
+. +.+|. .+..+.++++|+..+.++++..++-...|.|++.|..... +..++.|+.
T Consensus 160 g~--~~ig~-~~~~~~l~~~l~~~~~~~~~~~Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~~~~~~~l~~~~~~E~~ 236 (318)
T 3hwr_A 160 GE--LVIEP-TSHGANLAAIFAAAGVPVETSDNVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVMRDVMEECF 236 (318)
T ss_dssp EE--EEECC-CTTTHHHHHHHHHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSTTHHHHHHHHHHHHH
T ss_pred ce--EEEcC-CHHHHHHHHHHHhCCCCcEechHHHHHHHHHHHHHhhhhHHHHHHCCCHHHHhcChhHHHHHHHHHHHHH
Confidence 32 33444 3456789999999999888888888999999998875432 356788999
Q ss_pred HHHHHcCCCH-----HHHHHHHhhccCCccccccCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcH
Q 021213 207 TLGQSLGISA-----STLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPL 281 (316)
Q Consensus 207 ~l~~~~G~~~-----~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~ 281 (316)
.++++.|++. +.+.+...... .. ..++..++..|++.+-++..| .++++++++|+++|+
T Consensus 237 ~va~a~G~~l~~~~~~~~~~~~~~~~-~~----~sSM~qD~~~gr~tEid~i~G-----------~vv~~a~~~gv~tP~ 300 (318)
T 3hwr_A 237 AVARAEGVKLPDDVALAIRRIAETMP-RQ----SSSTAQDLARGKRSEIDHLNG-----------LIVRRGDALGIPVPA 300 (318)
T ss_dssp HHHHHTTCCCCTTHHHHHHHHHHHST-TC----CCHHHHHHHTTCCCSGGGTHH-----------HHHHHHHHTTCCCHH
T ss_pred HHHHHcCCCCChHHHHHHHHHHHhcC-CC----CcHHHHHHHcCChhHHHHHHH-----------HHHHHHHHhCCCCcH
Confidence 9999999752 23333333322 11 112345566677777777665 899999999999999
Q ss_pred HHHHHHHHHHHHH
Q 021213 282 TSQAQDIYAKLCE 294 (316)
Q Consensus 282 ~~~~~~~~~~~~~ 294 (316)
++.++++++....
T Consensus 301 ~~~l~~ll~~~e~ 313 (318)
T 3hwr_A 301 NRVLHALVRLIED 313 (318)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999887654
No 59
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.88 E-value=8e-22 Score=175.02 Aligned_cols=258 Identities=13% Similarity=0.081 Sum_probs=170.3
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCC---------------CCcCCHHHHhhcCCEEEEe
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGV---------------PTKETPFEVAEASDVVITM 68 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~---------------~~~~~~~~~~~~adivi~~ 68 (316)
|+|||+|||+|.||+.+|..|+++|++|++|+|++ .+.+++.|+ ..+++++++.+.+|+||+|
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVila 78 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLC 78 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEe
Confidence 45799999999999999999999999999999986 366665442 2345666766689999999
Q ss_pred CCCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCC-ChHhhhc
Q 021213 69 LPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSG-GVLAAEA 147 (316)
Q Consensus 69 vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~-~~~~~~~ 147 (316)
||... +++++..+.+.+. ++++||.+.++.. ..+.+.+.++...+ +.|+.+..+-..+ +.. ...
T Consensus 79 vK~~~--~~~~l~~l~~~l~-----~~t~Iv~~~nGi~-~~~~l~~~~~~~~v------l~g~~~~~a~~~~pg~v-~~~ 143 (320)
T 3i83_A 79 IKVVE--GADRVGLLRDAVA-----PDTGIVLISNGID-IEPEVAAAFPDNEV------ISGLAFIGVTRTAPGEI-WHQ 143 (320)
T ss_dssp CCCCT--TCCHHHHHTTSCC-----TTCEEEEECSSSS-CSHHHHHHSTTSCE------EEEEEEEEEEEEETTEE-EEE
T ss_pred cCCCC--hHHHHHHHHhhcC-----CCCEEEEeCCCCC-hHHHHHHHCCCCcE------EEEEEEeceEEcCCCEE-EEC
Confidence 99876 6788877766653 3456776665542 12455555543211 0112222111111 111 111
Q ss_pred CceEEEec----CCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHH--------------------HHHHHHH
Q 021213 148 GTLTFMVG----GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMA--------------------VSMLGVS 203 (316)
Q Consensus 148 g~~~~~~~----~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~--------------------~~~~~~~ 203 (316)
+...+.+| .+.+..+.+.++|+..+.++++..++....|-|++.|...+ .+..++.
T Consensus 144 ~~~~~~ig~~~~~~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~~N~ltal~~~~~g~~~~~~~~~l~~~~~~ 223 (320)
T 3i83_A 144 AYGRLMLGNYPGGVSERVKTLAAAFEEAGIDGIATENITTARWQKCVWNAAFNPLSVLSGGLDTLDILSTQEGFVRAIMQ 223 (320)
T ss_dssp EEEEEEEEESSSCCCHHHHHHHHHHHHTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHCHHHHHHHHH
T ss_pred CCCEEEEecCCCCccHHHHHHHHHHHhCCCCceECHHHHHHHHHHHHHHHhhhHHHHHHCCCHHHHHhCcHHHHHHHHHH
Confidence 22233443 34567889999999999998888889899999999886432 2356888
Q ss_pred HHHHHHHHcCCCH-----HHHHHHHhhccCCccccccCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCC
Q 021213 204 EALTLGQSLGISA-----STLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVD 278 (316)
Q Consensus 204 Ea~~l~~~~G~~~-----~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~ 278 (316)
|+..++++.|++. +.+++....... . ..++..++..|++.+-++..| .++++++++|++
T Consensus 224 E~~~va~a~G~~l~~~~~~~~~~~~~~~~~---~--~sSM~qD~~~gr~tEid~i~G-----------~vv~~a~~~gv~ 287 (320)
T 3i83_A 224 EIRAVAAANGHPLPEDIVEKNVASTYKMPP---Y--KTSMLVDFEAGQPMETEVILG-----------NAVRAGRRTRVA 287 (320)
T ss_dssp HHHHHHHHTTCCCCTTHHHHHHHHHHHSCC---C--CCHHHHHHHHTCCCCHHHHTH-----------HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCCCChHHHHHHHHHHhcCCC---C--CCcHHHHHHhCCCchHHHHcc-----------HHHHHHHHhCCC
Confidence 9999999999863 223333222211 0 112234444555555555444 899999999999
Q ss_pred CcHHHHHHHHHHHHHH
Q 021213 279 CPLTSQAQDIYAKLCE 294 (316)
Q Consensus 279 ~p~~~~~~~~~~~~~~ 294 (316)
+|+++.++++++....
T Consensus 288 ~P~~~~l~~~l~~~e~ 303 (320)
T 3i83_A 288 IPHLESVYALMKLLEL 303 (320)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999999998877655
No 60
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.87 E-value=1.1e-21 Score=169.37 Aligned_cols=246 Identities=15% Similarity=0.140 Sum_probs=166.6
Q ss_pred CCeEEEEccchhhHHHHHHHHhCC----CeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAG----YKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVY 80 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g----~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~ 80 (316)
+|||+|||+|.||++++..|.++| |+|++|||++++ .|+..++++.++++++|+||+|+|... +++++
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~g~~~~~~~~~~~~~~D~vi~~v~~~~--~~~v~ 75 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN------TTLNYMSSNEELARHCDIIVCAVKPDI--AGSVL 75 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------SSSEECSCHHHHHHHCSEEEECSCTTT--HHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------CceEEeCCHHHHHhcCCEEEEEeCHHH--HHHHH
Confidence 479999999999999999999999 799999999876 577777889999999999999999654 78988
Q ss_pred cCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccE-EeccCCCChHhhhcCceEEEecC---
Q 021213 81 NGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVM-LDAPVSGGVLAAEAGTLTFMVGG--- 156 (316)
Q Consensus 81 ~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~-~~~p~~~~~~~~~~g~~~~~~~~--- 156 (316)
.++.+.++ ++.++.++++..+. .+.+.++... . .+.+ ++.|..+ ..+ .++++++
T Consensus 76 ~~l~~~l~-----~~~vv~~~~gi~~~---~l~~~~~~~~---~-----~v~~~p~~p~~~-----~~g-~~~~~~~~~~ 133 (262)
T 2rcy_A 76 NNIKPYLS-----SKLLISICGGLNIG---KLEEMVGSEN---K-----IVWVMPNTPCLV-----GEG-SFIYCSNKNV 133 (262)
T ss_dssp HHSGGGCT-----TCEEEECCSSCCHH---HHHHHHCTTS---E-----EEEEECCGGGGG-----TCE-EEEEEECTTC
T ss_pred HHHHHhcC-----CCEEEEECCCCCHH---HHHHHhCCCC---c-----EEEECCChHHHH-----cCC-eEEEEeCCCC
Confidence 87655442 33466666777765 3444443310 0 0222 3444433 245 4555544
Q ss_pred CHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHH--HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCccccc
Q 021213 157 SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKI--CNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSD 234 (316)
Q Consensus 157 ~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~--~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~ 234 (316)
+++.+++++++|+.+|. ++++++.......++ +.|.+.+..+..+.|+ +.+.|++++.+.+++..+...++...
T Consensus 134 ~~~~~~~~~~ll~~~G~-~~~~~~~~~~~~~a~~~~~~~~~~~~~~al~~~---~~~~Gl~~~~~~~~~~~~~~~~~~~~ 209 (262)
T 2rcy_A 134 NSTDKKYVNDIFNSCGI-IHEIKEKDMDIATAISGCGPAYVYLFIESLIDA---GVKNGLSRELSKNLVLQTIKGSVEMV 209 (262)
T ss_dssp CHHHHHHHHHHHHTSEE-EEECCGGGHHHHHHHTTSHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCC-EEEeCHHHccHHHHHHccHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999997 888887545555554 3355555555555555 78999999999888876543222110
Q ss_pred -cCCCCCCcccCCCCCCCC-CCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcC
Q 021213 235 -SYNPVPGVMEGVPASRNY-GGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENG 296 (316)
Q Consensus 235 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g 296 (316)
.....|.++. +.+ .++++.. ..++..++.|++.++.+++.+.++++.+.+
T Consensus 210 ~~~~~~~~~l~-----d~~~~~~~t~~-------~~l~~l~~~~~~~~~~~a~~~~~~r~~~~~ 261 (262)
T 2rcy_A 210 KKSDQPVQQLK-----DNIVSPGGITA-------VGLYSLEKNSFKYTVMNAVEAACEKSKAMG 261 (262)
T ss_dssp HHCSSCHHHHH-----HHHCCTTSHHH-------HHHHHHHHTTHHHHHHHHHHHHHHHHHHHT
T ss_pred HhcCCCHHHHH-----HhcCCCChHHH-------HHHHHHHHCChHHHHHHHHHHHHHHHHHhc
Confidence 0011222221 122 3344433 344555677999999999999999998764
No 61
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.87 E-value=1.8e-22 Score=174.62 Aligned_cols=202 Identities=14% Similarity=0.149 Sum_probs=150.2
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCe-EEEEeCChhHHHHHHhC-CCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYK-MAVHDVNCNVMKMFSDM-GVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNG 82 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~-V~~~~r~~~~~~~l~~~-g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~ 82 (316)
.|||+|||+|.||..++..|.+.|++ |.+|||++++.+.+.+. |+....+++++++++|+||+|+|.+. +++++..
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~--~~~v~~~ 87 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSA--FAELLQG 87 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHH--HHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHH--HHHHHHH
Confidence 47999999999999999999999999 99999999999888775 87778888898899999999999774 6778765
Q ss_pred CCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHHHHH
Q 021213 83 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQ 162 (316)
Q Consensus 83 ~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~ 162 (316)
+.+.+ .+++++++++++.+.. .+.+.+... +..++..|+.+++.....+...++.+++++.++
T Consensus 88 l~~~~-----~~~~ivv~~s~~~~~~--~l~~~~~~~----------~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~ 150 (266)
T 3d1l_A 88 IVEGK-----REEALMVHTAGSIPMN--VWEGHVPHY----------GVFYPMQTFSKQREVDFKEIPFFIEASSTEDAA 150 (266)
T ss_dssp HHTTC-----CTTCEEEECCTTSCGG--GSTTTCSSE----------EEEEECCCC---CCCCCTTCCEEEEESSHHHHH
T ss_pred HHhhc-----CCCcEEEECCCCCchH--HHHHHHHhc----------cCcCCceecCCCchhhcCCCeEEEecCCHHHHH
Confidence 54433 2567999999887642 233322211 134556666553332223332333478999999
Q ss_pred HHHHHHHhcCCCeEeeCCcc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCC
Q 021213 163 AAKPLFLSMGKNTIYCGGAG---NGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSAR 229 (316)
Q Consensus 163 ~v~~ll~~~g~~v~~~g~~g---~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~ 229 (316)
.++++|+.+|++++++++.+ ...+.|+++|... ++..++|+ ++++.|++++++.+++..+...
T Consensus 151 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~ea--l~~~~Gl~~~~~~~l~~~~~~~ 216 (266)
T 3d1l_A 151 FLKAIASTLSNRVYDADSEQRKSLHLAAVFTCNFTN--HMYALAAE--LLKKYNLPFDVMLPLIDETARK 216 (266)
T ss_dssp HHHHHHHTTCSCEEECCHHHHHHHHHHHHHHHHHHH--HHHHHHHH--HHHHTTCCGGGGHHHHHHHHHH
T ss_pred HHHHHHHhcCCcEEEeCHHHHHHHHHHHHHHHHHHH--HHHHHHHH--HHHHcCCCHHHHHHHHHHHHHH
Confidence 99999999999899998754 5678899999843 34556675 6789999999999988876543
No 62
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.86 E-value=1.5e-20 Score=166.00 Aligned_cols=175 Identities=17% Similarity=0.226 Sum_probs=137.7
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCC--eEEEEeCChhHHHHHHhCCC--CCcCCHHH-HhhcCCEEEEeCCCChhhHHH
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKMFSDMGV--PTKETPFE-VAEASDVVITMLPSSSHQVLD 78 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~--~V~~~~r~~~~~~~l~~~g~--~~~~~~~~-~~~~adivi~~vp~~~~~~~~ 78 (316)
|.|||+|||+|.||.+++..|.++|+ +|++|||++++++.+.+.|+ ..++++++ ++++||+||+|+|... +.+
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~--~~~ 109 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRT--FRE 109 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGG--HHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHH--HHH
Confidence 44799999999999999999999999 99999999999998888887 34678888 8999999999999765 677
Q ss_pred HhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCC----hHhhh----cCce
Q 021213 79 VYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGG----VLAAE----AGTL 150 (316)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~----~~~~~----~g~~ 150 (316)
++.++.+.++ ++.+|+|++++++...+.+.+.++. . .+..+|+.|+ +..+. .+..
T Consensus 110 vl~~l~~~l~-----~~~iv~d~~Svk~~~~~~~~~~l~~-~-----------~v~~hPm~G~e~sG~~~A~~~Lf~g~~ 172 (314)
T 3ggo_A 110 IAKKLSYILS-----EDATVTDQGSVKGKLVYDLENILGK-R-----------FVGGHPIAGTEKSGVEYSLDNLYEGKK 172 (314)
T ss_dssp HHHHHHHHSC-----TTCEEEECCSCCTHHHHHHHHHHGG-G-----------EECEEECCCCCCCSGGGCCTTTTTTCE
T ss_pred HHHHHhhccC-----CCcEEEECCCCcHHHHHHHHHhcCC-C-----------EEecCcccCCcccchhhhhhhhhcCCE
Confidence 8766554443 5679999999987777777776643 1 2234677753 33222 4666
Q ss_pred EEEec---CCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHH
Q 021213 151 TFMVG---GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAV 197 (316)
Q Consensus 151 ~~~~~---~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~ 197 (316)
++++. ++++.+++++++++.+|.+++++++......++++.......
T Consensus 173 ~il~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~~hD~~~a~~s~lph~~ 222 (314)
T 3ggo_A 173 VILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAV 222 (314)
T ss_dssp EEECCCTTSCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHH
Confidence 66663 588999999999999999999999878888888887665544
No 63
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.85 E-value=2.9e-20 Score=167.56 Aligned_cols=268 Identities=12% Similarity=0.138 Sum_probs=161.0
Q ss_pred CCCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC-CC--------------CCcCCHHHHhhcCCEEEE
Q 021213 3 FFDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-GV--------------PTKETPFEVAEASDVVIT 67 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~-g~--------------~~~~~~~~~~~~adivi~ 67 (316)
|++|||+|||+|.||+.++..|.++||+|++|+|++++.+.+.+. +. ...++++++++++|+||+
T Consensus 2 m~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~ 81 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI 81 (359)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEE
Confidence 345899999999999999999999999999999999999888765 32 245688888889999999
Q ss_pred eCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEe---ccCCCC---
Q 021213 68 MLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLD---APVSGG--- 141 (316)
Q Consensus 68 ~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~---~p~~~~--- 141 (316)
|+|... .++++..+.+.+. +++++|+..+..+++.+ +.+.+.+.+. ..+.|++ .|+.+.
T Consensus 82 ~v~~~~--~~~~~~~l~~~l~-----~~~~vv~~~~~~~~~~~-~~~~l~~~~~-------~~v~~~~~~~~~~~~~~~g 146 (359)
T 1bg6_A 82 VVPAIH--HASIAANIASYIS-----EGQLIILNPGATGGALE-FRKILRENGA-------PEVTIGETSSMLFTCRSER 146 (359)
T ss_dssp CSCGGG--HHHHHHHHGGGCC-----TTCEEEESSCCSSHHHH-HHHHHHHTTC-------CCCEEEEESSCSEEEECSS
T ss_pred eCCchH--HHHHHHHHHHhCC-----CCCEEEEcCCCchHHHH-HHHHHHhcCC-------CCeEEEEecCCcEEEEeCC
Confidence 999876 5777766555443 45678877553444433 4444443210 0022333 333321
Q ss_pred hHhhh----cCceEEEe---cCCHHHHHHHHHHHHhcCCCeEeeCCc-------------------chHHHHH------H
Q 021213 142 VLAAE----AGTLTFMV---GGSEDAYQAAKPLFLSMGKNTIYCGGA-------------------GNGAAAK------I 189 (316)
Q Consensus 142 ~~~~~----~g~~~~~~---~~~~~~~~~v~~ll~~~g~~v~~~g~~-------------------g~a~~~k------~ 189 (316)
+.... .+...+-. +++++..+.++++|..+. ...+. +.+...| +
T Consensus 147 pg~v~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~----~~~di~~k~~~nvn~~~n~~~al~~~~~~~~~~~~~~~ 222 (359)
T 1bg6_A 147 PGQVTVNAIKGAMDFACLPAAKAGWALEQIGSVLPQYV----AVENVLHTSLTNVNAVMHPLPTLLNAARCESGTPFQYY 222 (359)
T ss_dssp TTEEEEEEECSCEEEEEESGGGHHHHHHHHTTTCTTEE----ECSCHHHHHHCCHHHHHTHHHHHTTHHHHHTTCCCBHH
T ss_pred CCEEEEEEeecceEEEeccccccHHHHHHHHHHhhhcE----EcCChHhhhccCCCccccHHHHHhhhchhhcCCccchh
Confidence 11110 11211111 235556677777775542 11221 1111110 0
Q ss_pred H---HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCcccc--ccCCCCCCcccCCCCCCCCCCCcchh--hHH
Q 021213 190 C---NNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSS--DSYNPVPGVMEGVPASRNYGGGFASK--LMA 262 (316)
Q Consensus 190 ~---~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 262 (316)
. .+........++.|+..++++.|++++++.+.+......++.. ... ..+.+..+ ......++ .+.
T Consensus 223 ~~~~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~l~~~~-~~~sm~~d------~~~~~e~~~~~~~ 295 (359)
T 1bg6_A 223 LEGITPSVGSLAEKVDAERIAIAKAFDLNVPSVCEWYKESYGQSPATIYEAV-QGNPAYRG------IAGPINLNTRYFF 295 (359)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHC-------CCSHHHHH-HTCGGGTT------CBCCSSSCCHHHH
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHhCCCcccHHHHH-hcchhhcC------CCCCCCCCcccee
Confidence 0 1123455678889999999999999887777765543222210 000 00112211 11111223 678
Q ss_pred HHH----HHHHHHHHHcCCCCcHHHHHHHHHHHHHHcC
Q 021213 263 KDL----NLALASAKEVGVDCPLTSQAQDIYAKLCENG 296 (316)
Q Consensus 263 kd~----~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g 296 (316)
||+ ..++++++++|+++|+++.++++++.....+
T Consensus 296 ~D~~~~~g~~~~~a~~~gv~~P~~~~l~~~~~~~~~~~ 333 (359)
T 1bg6_A 296 EDVSTGLVPLSELGRAVNVPTPLIDAVLDLISSLIDTD 333 (359)
T ss_dssp HHHHTTHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTCC
T ss_pred cCcCccHHHHHHHHHHcCCCchHHHHHHHHHHHHHCCC
Confidence 888 7899999999999999999999999876553
No 64
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.85 E-value=1.4e-20 Score=164.16 Aligned_cols=195 Identities=15% Similarity=0.141 Sum_probs=137.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC-----------C--------------CCCcCCHHHHh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-----------G--------------VPTKETPFEVA 59 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~-----------g--------------~~~~~~~~~~~ 59 (316)
.+||+|||+|.||+.+|..|+++|++|++|||++++++.+.+. | +..++++.+++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~ 83 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAV 83 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHh
Confidence 4799999999999999999999999999999999987766543 1 45678888989
Q ss_pred hcCCEEEEeCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCC
Q 021213 60 EASDVVITMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVS 139 (316)
Q Consensus 60 ~~adivi~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~ 139 (316)
++||+||+|+|.+.+..+.++.++.+.++ ++.++++.++..+. ..+++.+.+.. +..| .||.+.+.
T Consensus 84 ~~aDlVi~av~~~~~~~~~v~~~l~~~~~-----~~~il~s~tS~~~~--~~la~~~~~~~--~~ig----~h~~~p~~- 149 (283)
T 4e12_A 84 KDADLVIEAVPESLDLKRDIYTKLGELAP-----AKTIFATNSSTLLP--SDLVGYTGRGD--KFLA----LHFANHVW- 149 (283)
T ss_dssp TTCSEEEECCCSCHHHHHHHHHHHHHHSC-----TTCEEEECCSSSCH--HHHHHHHSCGG--GEEE----EEECSSTT-
T ss_pred ccCCEEEEeccCcHHHHHHHHHHHHhhCC-----CCcEEEECCCCCCH--HHHHhhcCCCc--ceEE----EccCCCcc-
Confidence 99999999999874424566665544442 45677754444332 34555543311 1222 45554322
Q ss_pred CChHhhhcCceEEEecC---CHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Q 021213 140 GGVLAAEAGTLTFMVGG---SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISA 216 (316)
Q Consensus 140 ~~~~~~~~g~~~~~~~~---~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~ 216 (316)
...+..++.+ +++.+++++++++.+|+.+++++....+.. +++++. ..++|++.++++.++++
T Consensus 150 -------~~~lvevv~~~~t~~~~~~~~~~l~~~~g~~~v~v~~~~~g~i---~nr~~~----~~~~ea~~l~~~g~~~~ 215 (283)
T 4e12_A 150 -------VNNTAEVMGTTKTDPEVYQQVVEFASAIGMVPIELKKEKAGYV---LNSLLV----PLLDAAAELLVDGIADP 215 (283)
T ss_dssp -------TSCEEEEEECTTSCHHHHHHHHHHHHHTTCEEEECSSCCTTTT---HHHHHH----HHHHHHHHHHHTTSCCH
T ss_pred -------cCceEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEEecCCCCEE---ehHHHH----HHHHHHHHHHHhCCCCH
Confidence 2223334433 789999999999999999988854344442 344332 45789999999999999
Q ss_pred HHHHHHHhhcc
Q 021213 217 STLTKILNSSS 227 (316)
Q Consensus 217 ~~~~~~~~~~~ 227 (316)
+++.+++..+.
T Consensus 216 ~~id~~~~~~~ 226 (283)
T 4e12_A 216 ETIDKTWRIGT 226 (283)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcc
Confidence 99999987654
No 65
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=99.84 E-value=3.4e-21 Score=172.83 Aligned_cols=269 Identities=14% Similarity=0.076 Sum_probs=177.9
Q ss_pred CeEEEEccchhhHHHHHHHHhCCC--------eEEEEeCChhH-----HHHHHhCC--------------CCCcCCHHHH
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGY--------KMAVHDVNCNV-----MKMFSDMG--------------VPTKETPFEV 58 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~--------~V~~~~r~~~~-----~~~l~~~g--------------~~~~~~~~~~ 58 (316)
.||+|||+|.||+++|..|+++|| +|++|.|+++. .+.++..+ +.+++|+.++
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~a 114 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDS 114 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHH
Confidence 599999999999999999999875 59999998653 44455432 4556789999
Q ss_pred hhcCCEEEEeCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCC-HHH--HHHHHHHHhhchhhhccCCCCCccEEe
Q 021213 59 AEASDVVITMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTID-PQT--SRNISAAVSNCILKEKKDSWENPVMLD 135 (316)
Q Consensus 59 ~~~adivi~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~-~~~--~~~l~~~~~~~~~~~~~g~~~~~~~~~ 135 (316)
++++|+||+++|++. +++++.++++.+. ++..+|.++.+. +.+ .+.+.+.+.+.. + ....++.
T Consensus 115 l~~ad~ii~avPs~~--~r~~l~~l~~~~~-----~~~~iv~~~KGie~~~~~~~~~se~i~e~~-----~--~~~~vLs 180 (391)
T 4fgw_A 115 VKDVDIIVFNIPHQF--LPRICSQLKGHVD-----SHVRAISCLKGFEVGAKGVQLLSSYITEEL-----G--IQCGALS 180 (391)
T ss_dssp HTTCSEEEECSCGGG--HHHHHHHHTTTSC-----TTCEEEECCCSCEEETTEEECHHHHHHHHH-----C--CEEEEEE
T ss_pred HhcCCEEEEECChhh--hHHHHHHhccccC-----CCceeEEeccccccccccchhHHHHHHHHh-----C--ccceecc
Confidence 999999999999876 8999988877664 445777777664 211 133444444321 0 0145678
Q ss_pred ccCCCChHhhhcCceEEEecCCHH---------HHHHHHHHHHhcCCCeEeeCC---c--------------chHHHHHH
Q 021213 136 APVSGGVLAAEAGTLTFMVGGSED---------AYQAAKPLFLSMGKNTIYCGG---A--------------GNGAAAKI 189 (316)
Q Consensus 136 ~p~~~~~~~~~~g~~~~~~~~~~~---------~~~~v~~ll~~~g~~v~~~g~---~--------------g~a~~~k~ 189 (316)
.|.+.........+.+++++.+.+ ..+.++.+|+.-..+++...| + |....+++
T Consensus 181 GPs~A~EVa~~~pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~~frvy~s~DviGvElgGAlKNViAIAaGi~dGlg~ 260 (391)
T 4fgw_A 181 GANIATEVAQEHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPYFHVSVIEDVAGISICGALKNVVALGCGFVEGLGW 260 (391)
T ss_dssp CSCCHHHHHTTCCEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCchHHHhhcCCCceEEEEecChhhhhhhhHHHHHHHHHHHhCCCCEEEEEeCCccceehHHHHHHHHHHHHHHHhcCCC
Confidence 888765555555555555543322 346678888765555555544 1 44444556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHc---CCCHHHHHHHHhhcc--CCccccccCCCCCCccc---CCCCCC---CCCCCcch
Q 021213 190 CNNLTMAVSMLGVSEALTLGQSL---GISASTLTKILNSSS--ARCWSSDSYNPVPGVME---GVPASR---NYGGGFAS 258 (316)
Q Consensus 190 ~~n~~~~~~~~~~~Ea~~l~~~~---G~~~~~~~~~~~~~~--~~s~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~ 258 (316)
..|.-.+.+.++++|+.+++.++ |-++.++..+.+.|+ .+|.+ .+++..+... |...+. .... ..+
T Consensus 261 G~NakAALitrGl~Em~rlg~al~~~g~~~tt~~glaGlGDLi~Tc~s--SRNr~~G~~lg~~G~~~~~~~~~~~~-g~v 337 (391)
T 4fgw_A 261 GNNASAAIQRVGLGEIIRFGQMFFPESREETYYQESAGVADLITTCAG--GRNVKVARLMATSGKDAWECEKELLN-GQS 337 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHSTTTHHHHHHHHHS--SHHHHHHHHHHHTCCCHHHHHHHHHT-TCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcccCCceeecCCCcccceeEEecC--CccHHHHHHHHhcCCCHHHHHHHHhC-CCE
Confidence 67888888999999999999998 556666655545544 22332 2333222211 110000 0000 123
Q ss_pred hhHHHHHHHHHHHHHHcCC--CCcHHHHHHHHHHH
Q 021213 259 KLMAKDLNLALASAKEVGV--DCPLTSQAQDIYAK 291 (316)
Q Consensus 259 ~~~~kd~~~~~~~a~~~g~--~~p~~~~~~~~~~~ 291 (316)
.+.....+.+.++++++|+ ++|+++++++++..
T Consensus 338 ~EGv~ta~~v~~l~~~~~v~~emPI~~~vy~IL~~ 372 (391)
T 4fgw_A 338 AQGLITCKEVHEWLETCGSVEDFPLFEAVYQIVYN 372 (391)
T ss_dssp CTHHHHHHHHHHHHHHHTCSTTCHHHHHHHHHHHS
T ss_pred EehHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHhC
Confidence 5677788899999999999 89999999999873
No 66
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.84 E-value=1e-19 Score=158.37 Aligned_cols=196 Identities=13% Similarity=0.172 Sum_probs=144.0
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCC--CcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP--TKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~--~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
|||+|||+|.||++++..|.+.|++|++|+|++++.+.+.+.|+. ..+++.++ +++|+||+|+|.+. +.+++.++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~~--~~~~~~~l 77 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQL--ILPTLEKL 77 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHHH--HHHHHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHHH--HHHHHHHH
Confidence 589999999999999999999999999999999999888887764 45678888 89999999999654 68888765
Q ss_pred CCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCC----hHhh----hcCceEEEec
Q 021213 84 NGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGG----VLAA----EAGTLTFMVG 155 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~----~~~~----~~g~~~~~~~ 155 (316)
.+.++ ++++++++++..+...+.+.+.+. ..+..+|+.|+ +..+ ..+..+.+..
T Consensus 78 ~~~~~-----~~~~vv~~~~~~~~~~~~~~~~~~-------------~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~ 139 (279)
T 2f1k_A 78 IPHLS-----PTAIVTDVASVKTAIAEPASQLWS-------------GFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTP 139 (279)
T ss_dssp GGGSC-----TTCEEEECCSCCHHHHHHHHHHST-------------TCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEE
T ss_pred HhhCC-----CCCEEEECCCCcHHHHHHHHHHhC-------------CEeecCcccCCccCCHHHHhHHHhCCCcEEEec
Confidence 54442 456899998887766655554322 12344576632 2222 2344455442
Q ss_pred ---CCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--HHHHHHHHhhc
Q 021213 156 ---GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGIS--ASTLTKILNSS 226 (316)
Q Consensus 156 ---~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~--~~~~~~~~~~~ 226 (316)
++++..+.++++|+.+|.+++++++.....+.|++.|...+... ++.++ +...|.+ .+....++..+
T Consensus 140 ~~~~~~~~~~~v~~l~~~~g~~~~~~~~~~~~~~~~~~~~~p~~i~~-al~~~---~~~~~~~~~~~~~~~l~~~~ 211 (279)
T 2f1k_A 140 TEYTDPEQLACLRSVLEPLGVKIYLCTPADHDQAVAWISHLPVMVSA-ALIQA---CAGEKDGDILKLAQNLASSG 211 (279)
T ss_dssp CTTCCHHHHHHHHHHHGGGTCEEEECCHHHHHHHHHHHTHHHHHHHH-HHHHH---HHTCSCHHHHHHHHHHCCHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHH-HHHHH---HHhcccccchhHHHhhcCCc
Confidence 47889999999999999988899988899999999997555443 44444 4456665 45666655443
No 67
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.84 E-value=1.1e-19 Score=158.32 Aligned_cols=175 Identities=18% Similarity=0.278 Sum_probs=135.9
Q ss_pred CeEEEEccchhhHHHHHHHHhCCC--eEEEEeCChhHHHHHHhCCCC--CcCCHHHHhh-cCCEEEEeCCCChhhHHHHh
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKMFSDMGVP--TKETPFEVAE-ASDVVITMLPSSSHQVLDVY 80 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~--~V~~~~r~~~~~~~l~~~g~~--~~~~~~~~~~-~adivi~~vp~~~~~~~~v~ 80 (316)
|||+|||+|.||++++..|.+.|+ +|++|||++++.+.+.+.|+. ..++++++++ ++|+||+|+|.+. ..+++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~~--~~~v~ 79 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRT--FREIA 79 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHH--HHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHHH--HHHHH
Confidence 589999999999999999999999 999999999999888888875 3567888888 9999999999765 67777
Q ss_pred cCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCC----ChHhh----hcCceEE
Q 021213 81 NGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSG----GVLAA----EAGTLTF 152 (316)
Q Consensus 81 ~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~----~~~~~----~~g~~~~ 152 (316)
.++.+.++ ++.++++++++.+...+.+.+.++.. .+..+|+.+ ++..+ ..+..++
T Consensus 80 ~~l~~~l~-----~~~iv~~~~~~~~~~~~~l~~~l~~~------------~v~~~p~~~~~~~gp~~a~~~l~~g~~~~ 142 (281)
T 2g5c_A 80 KKLSYILS-----EDATVTDQGSVKGKLVYDLENILGKR------------FVGGHPIAGTEKSGVEYSLDNLYEGKKVI 142 (281)
T ss_dssp HHHHHHSC-----TTCEEEECCSCCTHHHHHHHHHHGGG------------EECEEEECCCSCCSGGGCCSSTTTTCEEE
T ss_pred HHHHhhCC-----CCcEEEECCCCcHHHHHHHHHhcccc------------ceeeccccCCccCChhhhhhHHhCCCCEE
Confidence 65544332 45689999888877777777766531 223355554 22332 2566566
Q ss_pred Ee---cCCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHH
Q 021213 153 MV---GGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSM 199 (316)
Q Consensus 153 ~~---~~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~ 199 (316)
+. +++++..+.++++|+.+|.+++++++.....++|++.|...+...
T Consensus 143 ~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~~~~d~~~~~~~~~~~~~a~ 192 (281)
T 2g5c_A 143 LTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAF 192 (281)
T ss_dssp ECCCSSSCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHH
T ss_pred EecCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHHHH
Confidence 66 678899999999999999988888887789999999998765433
No 68
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.84 E-value=1.7e-20 Score=174.14 Aligned_cols=196 Identities=20% Similarity=0.232 Sum_probs=139.8
Q ss_pred CCCCCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh-----------CC-------------CCCcCCHH
Q 021213 1 MLFFDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-----------MG-------------VPTKETPF 56 (316)
Q Consensus 1 ~~~~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~-----------~g-------------~~~~~~~~ 56 (316)
|.|..+||+|||+|.||+.||..|+++||+|++||+++++++.+.+ .| ++.+++.+
T Consensus 1 Msm~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 80 (483)
T 3mog_A 1 MSLNVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH 80 (483)
T ss_dssp ---CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH
Confidence 4444579999999999999999999999999999999998877643 33 23455664
Q ss_pred HHhhcCCEEEEeCCCChhhHHHHhcCCCCcccCCCCCCCeEE-EEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEe
Q 021213 57 EVAEASDVVITMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLL-IDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLD 135 (316)
Q Consensus 57 ~~~~~adivi~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~v-i~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~ 135 (316)
.+++||+||+|+|.+.+..++++.++.+.++ ++.++ .|+|+.++. .+++.+.+ ..+..| .||.+
T Consensus 81 -~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~-----~~~IlasntSti~i~---~ia~~~~~--p~~~ig----~hf~~ 145 (483)
T 3mog_A 81 -ALAAADLVIEAASERLEVKKALFAQLAEVCP-----PQTLLTTNTSSISIT---AIAAEIKN--PERVAG----LHFFN 145 (483)
T ss_dssp -GGGGCSEEEECCCCCHHHHHHHHHHHHHHSC-----TTCEEEECCSSSCHH---HHTTTSSS--GGGEEE----EEECS
T ss_pred -HhcCCCEEEEcCCCcHHHHHHHHHHHHHhhc-----cCcEEEecCCCCCHH---HHHHHccC--ccceEE----eeecC
Confidence 6789999999999986523466666554443 45566 467877765 33333322 111222 56666
Q ss_pred ccCCCChHhhhcCceEEEecC---CHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 021213 136 APVSGGVLAAEAGTLTFMVGG---SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSL 212 (316)
Q Consensus 136 ~p~~~~~~~~~~g~~~~~~~~---~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~ 212 (316)
.+... .++.++++ +++.++++.++++.+|+.++++++.. + ++++|++.. .++|++.++++.
T Consensus 146 Pa~v~--------~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~~-G---fi~Nr~l~~----~~~Ea~~l~~~g 209 (483)
T 3mog_A 146 PAPVM--------KLVEVVSGLATAAEVVEQLCELTLSWGKQPVRCHSTP-G---FIVNRVARP----YYSEAWRALEEQ 209 (483)
T ss_dssp STTTC--------CEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESCT-T---TTHHHHTHH----HHHHHHHHHHTT
T ss_pred hhhhC--------CeEEEecCCCCCHHHHHHHHHHHHHhCCEEEEEeccC-c---chHHHHHHH----HHHHHHHHHHhC
Confidence 32211 34555655 89999999999999999999998742 3 556665444 578999999999
Q ss_pred CCCHHHHHHHHhhcc
Q 021213 213 GISASTLTKILNSSS 227 (316)
Q Consensus 213 G~~~~~~~~~~~~~~ 227 (316)
+++++++.+++..+.
T Consensus 210 ~~~~~~id~a~~~~~ 224 (483)
T 3mog_A 210 VAAPEVIDAALRDGA 224 (483)
T ss_dssp CSCHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHhcC
Confidence 999999999997643
No 69
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.83 E-value=1.6e-20 Score=157.80 Aligned_cols=170 Identities=19% Similarity=0.238 Sum_probs=122.8
Q ss_pred CCCCeEEEEccchhhHHHHHHHHhCCCeEEE-EeCChhHHHHHHh-CCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHh
Q 021213 3 FFDQSVGFIGLGNMGFRMASNLMKAGYKMAV-HDVNCNVMKMFSD-MGVPTKETPFEVAEASDVVITMLPSSSHQVLDVY 80 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~~la~~l~~~g~~V~~-~~r~~~~~~~l~~-~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~ 80 (316)
|++|||+|||+|+||++++..|.++|++|++ |+|++++++.+.+ .|.....+..+.++++|+||+|+|... +++++
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~~~--~~~v~ 98 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPYDS--IADIV 98 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCGGG--HHHHH
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCChHH--HHHHH
Confidence 4457999999999999999999999999999 9999999888765 476666666777899999999999655 78888
Q ss_pred cCCCCcccCCCCCCCeEEEEcCCCCH------------HHHHHHHHHHhhchhhhccCCCCCccEEeccCCC-ChHhhhc
Q 021213 81 NGPNGLLQGGNSVRPQLLIDSSTIDP------------QTSRNISAAVSNCILKEKKDSWENPVMLDAPVSG-GVLAAEA 147 (316)
Q Consensus 81 ~~~~~~~~~~~~~~~~~vi~~st~~~------------~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~-~~~~~~~ 147 (316)
..+.+ + +++++|++++..+ ...+.+++.++...+.+. +.....++.. ++.....
T Consensus 99 ~~l~~-~------~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~~vv~~------~~~~~~~v~~~g~~~~~~ 165 (220)
T 4huj_A 99 TQVSD-W------GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPGAKVVKA------FNTLPAAVLAADPDKGTG 165 (220)
T ss_dssp TTCSC-C------TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTTCEEEEE------SCSSCHHHHTSCSBCSSC
T ss_pred HHhhc-c------CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCCCCCEEEC------CCCCCHHHhhhCcccCCC
Confidence 87654 3 3468898887652 155677776653221000 1112222222 2221112
Q ss_pred CceEEEecCCHHHHHHHHHHHHhcCCCeEeeCCcchHHHH
Q 021213 148 GTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAA 187 (316)
Q Consensus 148 g~~~~~~~~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~ 187 (316)
+...++.+.+++..+.++++++.+|.+++++|+.+.+.++
T Consensus 166 ~~~v~~~g~~~~~~~~v~~l~~~~G~~~~~~G~l~~a~~~ 205 (220)
T 4huj_A 166 SRVLFLSGNHSDANRQVAELISSLGFAPVDLGTLAASGPI 205 (220)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHHTTCEEEECCSHHHHHHH
T ss_pred CeeEEEeCCCHHHHHHHHHHHHHhCCCeEeeCChhhcchh
Confidence 2334556678999999999999999999999998777664
No 70
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.82 E-value=8.8e-20 Score=160.62 Aligned_cols=193 Identities=16% Similarity=0.235 Sum_probs=132.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHH-----------hCC------------------CCCcCCH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS-----------DMG------------------VPTKETP 55 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~-----------~~g------------------~~~~~~~ 55 (316)
++||+|||+|.||++||..|+++||+|++|||++++++.+. +.| +..++++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~ 94 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDA 94 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCH
Confidence 36899999999999999999999999999999998876532 233 3346788
Q ss_pred HHHhhcCCEEEEeCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhchhhhccCCCCCccEE
Q 021213 56 FEVAEASDVVITMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNCILKEKKDSWENPVML 134 (316)
Q Consensus 56 ~~~~~~adivi~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~ 134 (316)
++++++||+||+|+|.+.+..+.++.++.+.++ ++.+++.. |+..+. .+++.+... .+..+ .+|.
T Consensus 95 ~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~-----~~~iv~s~ts~i~~~---~l~~~~~~~--~~~~g----~h~~ 160 (302)
T 1f0y_A 95 ASVVHSTDLVVEAIVENLKVKNELFKRLDKFAA-----EHTIFASNTSSLQIT---SIANATTRQ--DRFAG----LHFF 160 (302)
T ss_dssp HHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSC-----TTCEEEECCSSSCHH---HHHTTSSCG--GGEEE----EEEC
T ss_pred HHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCC-----CCeEEEECCCCCCHH---HHHHhcCCc--ccEEE----EecC
Confidence 888999999999999876523456655544442 44566644 444443 343333211 01122 4554
Q ss_pred eccCCCChHhhhcCceEEEecC---CHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021213 135 DAPVSGGVLAAEAGTLTFMVGG---SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQS 211 (316)
Q Consensus 135 ~~p~~~~~~~~~~g~~~~~~~~---~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~ 211 (316)
+ |.. .+.+..++++ +++.++.+.++++.+|+.++++++. .+ ++++|.+ ...++|++.++++
T Consensus 161 ~-P~~-------~~~~~~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~-~g---~i~nr~l----~~~~~Ea~~l~~~ 224 (302)
T 1f0y_A 161 N-PVP-------VMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDT-PG---FIVNRLL----VPYLMEAIRLYER 224 (302)
T ss_dssp S-STT-------TCCEEEEECCTTCCHHHHHHHHHHHHHTTCEEEEECSC-TT---TTHHHHH----HHHHHHHHHHHHT
T ss_pred C-Ccc-------cCceEEEeCCCCCCHHHHHHHHHHHHHcCCceEEecCc-cc---ccHHHHH----HHHHHHHHHHHHc
Confidence 4 321 1222334443 8999999999999999988888763 22 3444443 2458899999999
Q ss_pred cCCCHHHHHHHHhhcc
Q 021213 212 LGISASTLTKILNSSS 227 (316)
Q Consensus 212 ~G~~~~~~~~~~~~~~ 227 (316)
.|++++++..++..+.
T Consensus 225 g~~~~~~id~~~~~g~ 240 (302)
T 1f0y_A 225 GDASKEDIDTAMKLGA 240 (302)
T ss_dssp TSSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhCC
Confidence 9999999999886543
No 71
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.82 E-value=2.6e-21 Score=169.76 Aligned_cols=260 Identities=13% Similarity=0.126 Sum_probs=168.2
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCC---CcCCHHHHh-hcCCEEEEeCCCChhhHHHH
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP---TKETPFEVA-EASDVVITMLPSSSHQVLDV 79 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~---~~~~~~~~~-~~adivi~~vp~~~~~~~~v 79 (316)
|+|||+|||+|.||++++..|.++|++|++|+|+++.++.....|.. ...++.+.+ +.+|+||+|||... ++++
T Consensus 1 M~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~~--~~~~ 78 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTHQ--LDAV 78 (294)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGGG--HHHH
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCccC--HHHH
Confidence 45799999999999999999999999999999997654322223321 122444544 78999999999775 7999
Q ss_pred hcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHH
Q 021213 80 YNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSED 159 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~ 159 (316)
+..+++.+. ++++||.+.++..... . ++...+ +.++.+..+-..+ +.....+...+.. ++.+
T Consensus 79 l~~l~~~l~-----~~~~iv~~~nGi~~~~-~----~~~~~v------~~g~~~~~a~~~~-pg~v~~~~~~~~~-~~~~ 140 (294)
T 3g17_A 79 IPHLTYLAH-----EDTLIILAQNGYGQLE-H----IPFKNV------CQAVVYISGQKKG-DVVTHFRDYQLRI-QDNA 140 (294)
T ss_dssp GGGHHHHEE-----EEEEEEECCSSCCCGG-G----CCCSCE------EECEEEEEEEEET-TEEEEEEEEEEEE-ECSH
T ss_pred HHHHHHhhC-----CCCEEEEeccCcccHh-h----CCCCcE------EEEEEEEEEEEcC-CCEEEECCCEEec-CccH
Confidence 888776653 3456666666542211 1 222111 0112222211111 1111111112233 3556
Q ss_pred HHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHcCCC--HH
Q 021213 160 AYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMA--------------------VSMLGVSEALTLGQSLGIS--AS 217 (316)
Q Consensus 160 ~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~--------------------~~~~~~~Ea~~l~~~~G~~--~~ 217 (316)
..+.+.++|+..+.++++..++-...|-|++.|...+ .+..++.|+.+++++.|++ ++
T Consensus 141 ~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~inl~al~~~~~g~~l~~~~~~~l~~~~~~E~~~va~a~G~~l~~~ 220 (294)
T 3g17_A 141 LTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITALGRQTVAIMHNPEIRILCRQLLLDGCRVAQAEGLNFSEQ 220 (294)
T ss_dssp HHHHHHHHTTTSSCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSHHHHHHHHHHHHHHHHHHHHTTCCCCHH
T ss_pred HHHHHHHHHHhCCCceEEChHHHHHHHHHHHHHHHHHHHHHHCCChHHHHcCHHHHHHHHHHHHHHHHHHHHcCCCCCHH
Confidence 6788999999988888888888899999999998433 1255888999999999975 44
Q ss_pred HHHHHHhhccCCccccccCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc
Q 021213 218 TLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCEN 295 (316)
Q Consensus 218 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~ 295 (316)
.+.+.+....... .....++..++..|++.+-++..| ++++.++++|+++|+++.++++++...+.
T Consensus 221 ~~~~~~~~~~~~~-~~~~sSM~qD~~~gr~tEid~i~G-----------~vv~~a~~~gv~~P~~~~l~~ll~~~e~~ 286 (294)
T 3g17_A 221 TVDTIMTIYQGYP-DEMGTSMYYDIVHQQPLEVEAIQG-----------FIYRRAREHNLDTPYLDTIYSFLRAYQQN 286 (294)
T ss_dssp HHHHHHHHHHTSC-TTCCCHHHHHHHTTCCCSGGGTHH-----------HHHHHHHHTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcC-CCCCCcHHHHHHcCCCccHHHhhh-----------HHHHHHHHhCCCCChHHHHHHHHHHHHhc
Confidence 4444443211000 000112334556677777777655 89999999999999999999999887764
No 72
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.81 E-value=3.5e-19 Score=163.23 Aligned_cols=189 Identities=16% Similarity=0.145 Sum_probs=131.9
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHH--------HHHHhCCC-------------CCcCCHHHHhhcCCE
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVM--------KMFSDMGV-------------PTKETPFEVAEASDV 64 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~--------~~l~~~g~-------------~~~~~~~~~~~~adi 64 (316)
+||+|||+|.||+.||..|+++|++|++||+++++. +.+.+.|. ..+++++ .+++||+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDl 133 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCDL 133 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCCE
Confidence 689999999999999999999999999999998843 23334442 3466764 6789999
Q ss_pred EEEeCCCChhhHHHHhcCCCCcccCCCCCCCeEEEE-cCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChH
Q 021213 65 VITMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLID-SSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVL 143 (316)
Q Consensus 65 vi~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~-~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~ 143 (316)
||+|+|++.+..+.++.++.+.++ ++.++++ +|+.++. .+++.+.+ ..+..| .+|.+++....
T Consensus 134 VIeAVpe~~~vk~~v~~~l~~~~~-----~~aIlasnTSsl~i~---~ia~~~~~--p~r~iG----~HffnPv~~m~-- 197 (460)
T 3k6j_A 134 IVESVIEDMKLKKELFANLENICK-----STCIFGTNTSSLDLN---EISSVLRD--PSNLVG----IHFFNPANVIR-- 197 (460)
T ss_dssp EEECCCSCHHHHHHHHHHHHTTSC-----TTCEEEECCSSSCHH---HHHTTSSS--GGGEEE----EECCSSTTTCC--
T ss_pred EEEcCCCCHHHHHHHHHHHHhhCC-----CCCEEEecCCChhHH---HHHHhccC--CcceEE----EEecchhhhCC--
Confidence 999999876523456665555443 4556654 5555543 44443322 111232 67776332111
Q ss_pred hhhcCceEEEec--CCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 021213 144 AAEAGTLTFMVG--GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTK 221 (316)
Q Consensus 144 ~~~~g~~~~~~~--~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~ 221 (316)
...++.+ ++++.++++.++++.+|+.++++++ ..+. ++|+++. ..++|++.++++.|++++++.+
T Consensus 198 -----LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d-~pGf---i~Nril~----~~~~EA~~l~~~~Ga~~e~ID~ 264 (460)
T 3k6j_A 198 -----LVEIIYGSHTSSQAIATAFQACESIKKLPVLVGN-CKSF---VFNRLLH----VYFDQSQKLMYEYGYLPHQIDK 264 (460)
T ss_dssp -----EEEEECCSSCCHHHHHHHHHHHHHTTCEEEEESS-CCHH---HHHHHHH----HHHHHHHHHHHTSCCCHHHHHH
T ss_pred -----EEEEEeCCCCCHHHHHHHHHHHHHhCCEEEEEec-ccHH---HHHHHHH----HHHHHHHHHHHHcCCCHHHHHH
Confidence 1223444 3899999999999999999999987 4554 3344433 3578999999999999999999
Q ss_pred HHh
Q 021213 222 ILN 224 (316)
Q Consensus 222 ~~~ 224 (316)
++.
T Consensus 265 a~~ 267 (460)
T 3k6j_A 265 IIT 267 (460)
T ss_dssp HHH
T ss_pred HHH
Confidence 986
No 73
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.81 E-value=2.9e-19 Score=158.72 Aligned_cols=174 Identities=13% Similarity=0.133 Sum_probs=134.6
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhc----CCEEEEeCCCChhhHHHHh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEA----SDVVITMLPSSSHQVLDVY 80 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~----adivi~~vp~~~~~~~~v~ 80 (316)
.+||+|||+|.||++|+..|.++|++|++|||++++.+.+.+.|+..+.++.+++++ +|+||+|+|.. . +.+++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~~-~-~~~vl 85 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMT-A-IDSLL 85 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCHH-H-HHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCHH-H-HHHHH
Confidence 378999999999999999999999999999999999998889998888888887764 79999999964 3 78888
Q ss_pred cCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEe-ccCCCChH-h-------hhcCceE
Q 021213 81 NGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLD-APVSGGVL-A-------AEAGTLT 151 (316)
Q Consensus 81 ~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~-~p~~~~~~-~-------~~~g~~~ 151 (316)
..+.++ .++.+|+|++++++...+.+.+.+.. ..|+. +|+.|+.. + ...+..+
T Consensus 86 ~~l~~~------~~~~iv~Dv~Svk~~i~~~~~~~~~~------------~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~ 147 (341)
T 3ktd_A 86 DAVHTH------APNNGFTDVVSVKTAVYDAVKARNMQ------------HRYVGSHPMAGTANSGWSASMDGLFKRAVW 147 (341)
T ss_dssp HHHHHH------CTTCCEEECCSCSHHHHHHHHHTTCG------------GGEECEEECCSCC-CCGGGCCSSTTTTCEE
T ss_pred HHHHcc------CCCCEEEEcCCCChHHHHHHHHhCCC------------CcEecCCccccccccchhhhhhHHhcCCeE
Confidence 665442 25579999999998777766654321 34555 89887541 1 1234456
Q ss_pred EEecC---CHH--------HHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHH
Q 021213 152 FMVGG---SED--------AYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVS 198 (316)
Q Consensus 152 ~~~~~---~~~--------~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~ 198 (316)
+++.+ +++ .+++++++++.+|.+++++++......+.++........
T Consensus 148 iltp~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~v~~~~~~~HD~~~A~vshlPh~ia 205 (341)
T 3ktd_A 148 VVTFDQLFDGTDINSTWISIWKDVVQMALAVGAEVVPSRVGPHDAAAARVSHLTHILA 205 (341)
T ss_dssp EECCGGGTSSCCCCHHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHH
T ss_pred EEEeCCCCChhhhccchHHHHHHHHHHHHHcCCEEEEeCHHHHHHHHHHHhHHHHHHH
Confidence 66543 556 889999999999999999988778888877777655433
No 74
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.80 E-value=2.2e-19 Score=149.97 Aligned_cols=173 Identities=16% Similarity=0.237 Sum_probs=131.0
Q ss_pred CeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC-C-------CCCcCCHHHHhhcCCEEEEeCCCChhhH
Q 021213 6 QSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-G-------VPTKETPFEVAEASDVVITMLPSSSHQV 76 (316)
Q Consensus 6 ~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~-g-------~~~~~~~~~~~~~adivi~~vp~~~~~~ 76 (316)
|||+||| +|.||+.++..|.+.|++|++|+|++++.+.+.+. + +. .++..++++++|+||+|+|.+. +
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~~~~~~--~ 77 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVLTIPWEH--A 77 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEECSCHHH--H
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEEeCChhh--H
Confidence 5899999 99999999999999999999999999888776552 2 33 3577788899999999999654 6
Q ss_pred HHHhcCCCCcccCCCCCCCeEEEEcCCCCH------------HHHHHHHHHHhhchhhhccCCCCCccEEec--cCCCCh
Q 021213 77 LDVYNGPNGLLQGGNSVRPQLLIDSSTIDP------------QTSRNISAAVSNCILKEKKDSWENPVMLDA--PVSGGV 142 (316)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~vi~~st~~~------------~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~--p~~~~~ 142 (316)
++++.++.+.+ ++++++++++... ...+++++.++. ..++.+ |+.+..
T Consensus 78 ~~~~~~l~~~~------~~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~------------~~~v~~~~~~~~~~ 139 (212)
T 1jay_A 78 IDTARDLKNIL------REKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES------------EKVVSALHTIPAAR 139 (212)
T ss_dssp HHHHHHTHHHH------TTSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC------------SCEEECCTTCCHHH
T ss_pred HHHHHHHHHHc------CCCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC------------CeEEEEccchHHHH
Confidence 77776554333 2468999887432 335677766643 345554 544333
Q ss_pred Hhh--hcCceEEEecCC-HHHHHHHHHHHHhc-CCCeEeeCCcchHHHHHHHHHHHHHHHH
Q 021213 143 LAA--EAGTLTFMVGGS-EDAYQAAKPLFLSM-GKNTIYCGGAGNGAAAKICNNLTMAVSM 199 (316)
Q Consensus 143 ~~~--~~g~~~~~~~~~-~~~~~~v~~ll~~~-g~~v~~~g~~g~a~~~k~~~n~~~~~~~ 199 (316)
... ..+..+++++++ ++..++++++|+.+ |.+++++++.+.+.++|.+.|.+.....
T Consensus 140 ~~~~~~~~~~~~~~~g~~~~~~~~v~~l~~~~~G~~~~~~~~~~~a~~~k~~~~~~~~~~~ 200 (212)
T 1jay_A 140 FANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNSRLVESLTPLILNIMR 200 (212)
T ss_dssp HHCTTCCCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGHHHHHTHHHHHHHHHH
T ss_pred hhCcCCCCCccEEEECCcHHHHHHHHHHHHHcCCCCceeccchhHHHHhcchHHHHHHHHH
Confidence 222 445567777775 88999999999999 9988899999999999999998776543
No 75
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.80 E-value=1.6e-20 Score=165.60 Aligned_cols=258 Identities=12% Similarity=0.020 Sum_probs=158.2
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCC----------HHHHhhcCCEEEEeCCCCh
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKET----------PFEVAEASDVVITMLPSSS 73 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~----------~~~~~~~adivi~~vp~~~ 73 (316)
|+|||+|||+|+||+.++..|. +|++|++|+|++++.+.+++.|+....+ ..+....+|+||+|||...
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~~ 79 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQHQ 79 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCHHH
Confidence 4589999999999999999999 9999999999998888888877543211 1234568999999999765
Q ss_pred hhHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCC--ChHhhhcCceE
Q 021213 74 HQVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSG--GVLAAEAGTLT 151 (316)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~--~~~~~~~g~~~ 151 (316)
+++++..++++ .++. ||...++.. ..+.+.+.++...+ .. ++.+..+-..+ .......+.
T Consensus 80 --~~~~l~~l~~~------~~~~-ivs~~nGi~-~~e~l~~~~~~~~v--l~----g~~~~~a~~~~pg~v~~~~~g~-- 141 (307)
T 3ego_A 80 --LQSVFSSLERI------GKTN-ILFLQNGMG-HIHDLKDWHVGHSI--YV----GIVEHGAVRKSDTAVDHTGLGA-- 141 (307)
T ss_dssp --HHHHHHHTTSS------CCCE-EEECCSSSH-HHHHHHTCCCSCEE--EE----EEECCEEEECSSSEEEEEECCC--
T ss_pred --HHHHHHHhhcC------CCCe-EEEecCCcc-HHHHHHHhCCCCcE--EE----EEEeeceEECCCCEEEEeeeee--
Confidence 78888766543 1344 666655543 33344444332211 00 11111111111 111122232
Q ss_pred EEec---CCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHH---------------------HHHHHHHHHH
Q 021213 152 FMVG---GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAV---------------------SMLGVSEALT 207 (316)
Q Consensus 152 ~~~~---~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~---------------------~~~~~~Ea~~ 207 (316)
+.+| ++.+.++.+.+.|+..|.++.+..++-...|.|++.|...+. +..++.|+..
T Consensus 142 ~~iG~~~~~~~~~~~l~~~l~~ag~~~~~~~di~~~~W~Kl~~N~~~N~ltal~~~~~g~l~~~~~~~~l~~~l~~E~~~ 221 (307)
T 3ego_A 142 IKWSAFDDAEPDRLNILFQHNHSDFPIYYETDWYRLLTGKLIVNACINPLTALLQVKNGELLTTPAYLAFMKLVFQEACR 221 (307)
T ss_dssp EEEEECTTCCGGGGTTTTSSCCTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHSHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCcHHHHHHHHHhhhCCCCcEechhHHHHHHHHHHHhhhhhHHHHHhcCCcchhhcChhHHHHHHHHHHHHHH
Confidence 3333 223344555556666677777778888999999999975443 2457778888
Q ss_pred HHHHcCCCHHHHHHHHhhccCCccccccCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHcCCCCcHHHHHHH
Q 021213 208 LGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQD 287 (316)
Q Consensus 208 l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~ 287 (316)
++++. +++.+.+.+...... ......++..++..|++.+-++..| .++++++++|+++|+++.+++
T Consensus 222 va~~~--~~~~~~~~~~~~~~~-~~~~~sSM~qD~~~gr~tEid~i~G-----------~vv~~a~~~gv~tP~~~~l~~ 287 (307)
T 3ego_A 222 ILKLE--NEEKAWERVQAVCGQ-TKENRSSMLVDVIGGRQTEADAIIG-----------YLLKEASLQGLDAVHLEFLYG 287 (307)
T ss_dssp HHTCS--CHHHHHHHHHHHHHH-TTTCCCHHHHHHHHTCCCSHHHHHH-----------HHHHHHHHTTCCCHHHHHHHH
T ss_pred HHhcc--ChHHHHHHHHHHHHh-cCCCCchHHHHHHcCCcccHHHhhh-----------HHHHHHHHcCCCCcHHHHHHH
Confidence 87654 344443332211100 0000112234445555555555433 889999999999999999999
Q ss_pred HHHHHHH
Q 021213 288 IYAKLCE 294 (316)
Q Consensus 288 ~~~~~~~ 294 (316)
+++...+
T Consensus 288 li~~~e~ 294 (307)
T 3ego_A 288 SIKALER 294 (307)
T ss_dssp HHHHTC-
T ss_pred HHHHHHh
Confidence 9987554
No 76
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.79 E-value=1.5e-18 Score=152.27 Aligned_cols=184 Identities=16% Similarity=0.179 Sum_probs=134.7
Q ss_pred CCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 5 DQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 5 ~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
.+||+||| +|.||++++..|.++|++|++|||+++ .++.+++++||+||+|||.+. +.+++.++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~-------------~~~~~~~~~aDvVilavp~~~--~~~vl~~l 85 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW-------------AVAESILANADVVIVSVPINL--TLETIERL 85 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG-------------GGHHHHHTTCSEEEECSCGGG--HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc-------------cCHHHHhcCCCEEEEeCCHHH--HHHHHHHH
Confidence 46899999 999999999999999999999999875 256778899999999999776 78888766
Q ss_pred CCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEec-CCHHHHH
Q 021213 84 NGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVG-GSEDAYQ 162 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~-~~~~~~~ 162 (316)
.+.++ ++.+|++++++.....+.+.+.++. ..+..+|++|+......+..+++.. .+++..+
T Consensus 86 ~~~l~-----~~~iv~~~~svk~~~~~~~~~~~~~------------~~v~~hP~~g~~~~~~~g~~~~l~~~~~~~~~~ 148 (298)
T 2pv7_A 86 KPYLT-----ENMLLADLTSVKREPLAKMLEVHTG------------AVLGLHPMFGADIASMAKQVVVRCDGRFPERYE 148 (298)
T ss_dssp GGGCC-----TTSEEEECCSCCHHHHHHHHHHCSS------------EEEEEEECSCTTCSCCTTCEEEEEEEECGGGTH
T ss_pred HhhcC-----CCcEEEECCCCCcHHHHHHHHhcCC------------CEEeeCCCCCCCchhhcCCeEEEecCCCHHHHH
Confidence 55443 4569999998887666555443210 2445678877654444555455543 3788899
Q ss_pred HHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Q 021213 163 AAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILN 224 (316)
Q Consensus 163 ~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~ 224 (316)
+++++|+.+|.+++++++.....+++++.+...+... .+.+++ ...|++.+....+..
T Consensus 149 ~v~~l~~~~G~~~~~~~~~~~d~~~a~~~~~p~~~a~-~l~~~l---~~~g~~~~~~~~la~ 206 (298)
T 2pv7_A 149 WLLEQIQIWGAKIYQTNATEHDHNMTYIQALRHFSTF-ANGLHL---SKQPINLANLLALSS 206 (298)
T ss_dssp HHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHH-HHHHHH---TTSSCCHHHHHHTCC
T ss_pred HHHHHHHHcCCEEEECCHHHHHHHHHHHHHHHHHHHH-HHHHHH---HhcCCCHHHHHhhcC
Confidence 9999999999988888876778888888887554332 233432 246777766555443
No 77
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.65 E-value=1.4e-20 Score=155.45 Aligned_cols=168 Identities=14% Similarity=0.153 Sum_probs=120.7
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
+.|+|+|||+|+||.+++..|.+.|++|++|+|+++ .+.+.+.|+... ++.++++++|+||+|+|.+. +++++ ++
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g~~~~-~~~~~~~~aDvVilav~~~~--~~~v~-~l 92 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRGAEVL-CYSEAASRSDVIVLAVHREH--YDFLA-EL 92 (201)
Confidence 457999999999999999999999999999999987 555655676655 78888889999999999754 67766 33
Q ss_pred CCcccCCCCCCCeEEEEcCCCCH------HHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCce-EEEecC
Q 021213 84 NGLLQGGNSVRPQLLIDSSTIDP------QTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTL-TFMVGG 156 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~~------~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~-~~~~~~ 156 (316)
.. ..+++++|+++++.+ ...+.+.+.++...+. ..+++.|..........+.. ++++|+
T Consensus 93 ~~------~~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~~~vv--------ra~~n~~a~~~~~g~l~g~~~~~~~g~ 158 (201)
T 2yjz_A 93 AD------SLKGRVLIDVSNNQKMNQYPESNAEYLAQLVPGAHVV--------KAFNTISAWALQSGTLDASRQVFVCGN 158 (201)
Confidence 22 224569999999886 2334555554432110 12333333322111111222 567777
Q ss_pred CHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHH
Q 021213 157 SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKIC 190 (316)
Q Consensus 157 ~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~ 190 (316)
+++.++.++++|+.+|.+++++|+.+.+.++|.+
T Consensus 159 ~~~~~~~v~~ll~~~G~~~~~~G~l~~a~~~e~~ 192 (201)
T 2yjz_A 159 DSKAKDRVMDIARTLGLTPLDQGSLVAAKEIENY 192 (201)
Confidence 8889999999999999999999999999998854
No 78
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.78 E-value=3.6e-18 Score=149.47 Aligned_cols=160 Identities=16% Similarity=0.230 Sum_probs=119.2
Q ss_pred CCeEEEEccchhhHHHHHHHHhC--CCeEEEEeCChhHHHHHHhCCCC--CcCCHHHHhhcCCEEEEeCCCChhhHHHHh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKA--GYKMAVHDVNCNVMKMFSDMGVP--TKETPFEVAEASDVVITMLPSSSHQVLDVY 80 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~--g~~V~~~~r~~~~~~~l~~~g~~--~~~~~~~~~~~adivi~~vp~~~~~~~~v~ 80 (316)
+|||+|||+|+||++++..|.++ |++|++|||++++.+.+.+.|.. .+.+++++++++|+||+|+|.+. .++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~--~~~v~ 83 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKK--TIDFI 83 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHH--HHHHH
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHH--HHHHH
Confidence 47999999999999999999988 68999999999999888887763 45678888899999999999765 57787
Q ss_pred cCCCCc-ccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEE-eccCCC----ChHhhh----cCce
Q 021213 81 NGPNGL-LQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVML-DAPVSG----GVLAAE----AGTL 150 (316)
Q Consensus 81 ~~~~~~-~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~-~~p~~~----~~~~~~----~g~~ 150 (316)
.++.+. ++ ++.++++++++.+...+.+.+.++... ..++ ++|++| ++..+. .+..
T Consensus 84 ~~l~~~~l~-----~~~ivi~~~~~~~~~~~~l~~~l~~~~----------~~~v~~~P~~g~~~~g~~~a~~~l~~g~~ 148 (290)
T 3b1f_A 84 KILADLDLK-----EDVIITDAGSTKYEIVRAAEYYLKDKP----------VQFVGSHPMAGSHKSGAVAANVNLFENAY 148 (290)
T ss_dssp HHHHTSCCC-----TTCEEECCCSCHHHHHHHHHHHHTTSS----------CEEEEEEEC-----CCTTSCCTTTTTTSE
T ss_pred HHHHhcCCC-----CCCEEEECCCCchHHHHHHHHhccccC----------CEEEEeCCcCCCCcchHHHhhHHHhCCCe
Confidence 665444 42 456888988887776677777665311 3344 467764 332222 4553
Q ss_pred EEEe---cCCHHHHHHHHHHHHhcCCCeEeeCCc
Q 021213 151 TFMV---GGSEDAYQAAKPLFLSMGKNTIYCGGA 181 (316)
Q Consensus 151 ~~~~---~~~~~~~~~v~~ll~~~g~~v~~~g~~ 181 (316)
+++. +++++..+.++++|+.+|.+++++++.
T Consensus 149 ~~~~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~~ 182 (290)
T 3b1f_A 149 YIFSPSCLTKPNTIPALQDLLSGLHARYVEIDAA 182 (290)
T ss_dssp EEEEECTTCCTTHHHHHHHHTGGGCCEEEECCHH
T ss_pred EEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCHH
Confidence 4433 367888999999999999988788753
No 79
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.77 E-value=5.4e-19 Score=153.54 Aligned_cols=190 Identities=15% Similarity=0.188 Sum_probs=125.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeE-EEEeCChhHHHHHHh-CCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKM-AVHDVNCNVMKMFSD-MGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNG 82 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V-~~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~ 82 (316)
+|||+|||+|+||.+++..|.++ ++| .+|||++++.+.+.+ .|. .+.+++++++++|+||+|+|++. +.+++.+
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~DvVilav~~~~--~~~v~~~ 77 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-KAATLEKHPELNGVVFVIVPDRY--IKTVANH 77 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-CCCSSCCCCC---CEEECSCTTT--HHHHHTT
T ss_pred CceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-ccCCHHHHHhcCCEEEEeCChHH--HHHHHHH
Confidence 36899999999999999999998 999 599999999888764 466 66778888889999999999876 6888876
Q ss_pred CCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhh-cCceEEEecCCHHHH
Q 021213 83 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAE-AGTLTFMVGGSEDAY 161 (316)
Q Consensus 83 ~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~-~g~~~~~~~~~~~~~ 161 (316)
+. .+++++|++++..+... +... . . +...+..+..+++.... .....++++++++.+
T Consensus 78 l~--------~~~~ivi~~s~~~~~~~--l~~~--~-----~-----~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 135 (276)
T 2i76_A 78 LN--------LGDAVLVHCSGFLSSEI--FKKS--G-----R-----ASIHPNFSFSSLEKALEMKDQIVFGLEGDERGL 135 (276)
T ss_dssp TC--------CSSCCEEECCSSSCGGG--GCSS--S-----E-----EEEEECSCC--CTTGGGCGGGCCEEECCCTTTH
T ss_pred hc--------cCCCEEEECCCCCcHHH--HHHh--h-----c-----cccchhhhcCCCchhHHHhCCCeEEEEeChHHH
Confidence 53 14568889887655421 1111 0 0 01233344555443332 334456677777889
Q ss_pred HHHHHHHHhcCCCeEeeCCcch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH--HHHHHHh
Q 021213 162 QAAKPLFLSMGKNTIYCGGAGN---GAAAKICNNLTMAVSMLGVSEALTLGQSLGISAS--TLTKILN 224 (316)
Q Consensus 162 ~~v~~ll~~~g~~v~~~g~~g~---a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~--~~~~~~~ 224 (316)
+.++++++.+|++++++++.+. ....+++.|.+. ..+.|+..++.+.|++.+ .+.+++.
T Consensus 136 ~~~~~l~~~lG~~~~~v~~~~~~~~~~~~~l~~n~~~----~~~~~a~~~~~~~Gl~~~~a~~~~l~~ 199 (276)
T 2i76_A 136 PIVKKIAEEISGKYFVIPSEKKKAYHLAAVIASNFPV----ALAYLSKRIYTLLGLDEPELLIHTLMK 199 (276)
T ss_dssp HHHHHHHHHHCSCEEECCGGGHHHHHHHHHHHHTTHH----HHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEECHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 9999999999988889986432 233456666443 345777788999999987 4444443
No 80
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.76 E-value=5.1e-19 Score=171.91 Aligned_cols=187 Identities=18% Similarity=0.183 Sum_probs=128.9
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHH-----------HhCC-------------CCCcCCHHHHhh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMF-----------SDMG-------------VPTKETPFEVAE 60 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l-----------~~~g-------------~~~~~~~~~~~~ 60 (316)
.+||+|||+|.||+.||..|+++||+|++||+++++++.. .+.| ++.++++ +.++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~ 392 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFG 392 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGG
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHC
Confidence 3689999999999999999999999999999999887653 2334 2345666 6788
Q ss_pred cCCEEEEeCCCChhhHHHHhcCCCCcccCCCCCCCeEEEE-cCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCC
Q 021213 61 ASDVVITMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLID-SSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVS 139 (316)
Q Consensus 61 ~adivi~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~-~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~ 139 (316)
+||+||+|||++.+..+.++.++.+.++ ++.++++ +|+.++. .+++.+.+ ..+..| .||.+ |+.
T Consensus 393 ~aDlVIeaV~e~~~vk~~v~~~l~~~~~-----~~~IlasntStl~i~---~la~~~~~--~~~~ig----~hf~~-P~~ 457 (715)
T 1wdk_A 393 NVDLVVEAVVENPKVKQAVLAEVENHVR-----EDAILASNTSTISIS---LLAKALKR--PENFVG----MHFFN-PVH 457 (715)
T ss_dssp GCSEEEECCCSCHHHHHHHHHHHHTTSC-----TTCEEEECCSSSCHH---HHGGGCSC--GGGEEE----EECCS-STT
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhhCC-----CCeEEEeCCCCCCHH---HHHHHhcC--ccceEE----EEccC-Ccc
Confidence 9999999999887622445555444442 4556664 4555443 34333321 111222 56665 332
Q ss_pred CChHhhhcCceE-EEecC--CHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Q 021213 140 GGVLAAEAGTLT-FMVGG--SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISA 216 (316)
Q Consensus 140 ~~~~~~~~g~~~-~~~~~--~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~ 216 (316)
. ..+. ++.+. +++.++.+.++++.+|+.++++++. .+. +.|.+.. ..++|++.++++ |+++
T Consensus 458 ~-------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~-~Gf----i~Nril~---~~~~Ea~~l~~~-G~~~ 521 (715)
T 1wdk_A 458 M-------MPLVEVIRGEKSSDLAVATTVAYAKKMGKNPIVVNDC-PGF----LVNRVLF---PYFGGFAKLVSA-GVDF 521 (715)
T ss_dssp T-------CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESC-TTT----THHHHHH---HHHHHHHHHHHT-TCCH
T ss_pred c-------CceEEEEECCCCCHHHHHHHHHHHHHhCCEeEEEcCC-CCh----hhhHHHH---HHHHHHHHHHHC-CCCH
Confidence 1 1223 33342 8999999999999999999999873 333 2343332 457899999997 9999
Q ss_pred HHHHHHH
Q 021213 217 STLTKIL 223 (316)
Q Consensus 217 ~~~~~~~ 223 (316)
+++.+++
T Consensus 522 ~~id~~~ 528 (715)
T 1wdk_A 522 VRIDKVM 528 (715)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999998
No 81
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.75 E-value=3.7e-17 Score=136.62 Aligned_cols=168 Identities=16% Similarity=0.204 Sum_probs=117.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
+|||+|||+|.||..++..|.+.|++|++|+|++++.+.+.+.|+... +..++++++|+||+|+|... +++++. +.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~~DvVi~av~~~~--~~~v~~-l~ 103 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT-FQEEAVSSPEVIFVAVFREH--YSSLCS-LS 103 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE-EHHHHTTSCSEEEECSCGGG--SGGGGG-GH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee-cHHHHHhCCCEEEECCChHH--HHHHHH-HH
Confidence 478999999999999999999999999999999999888877776655 78888899999999999643 566653 32
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHH----HHHHHhhchhhhccCCCCCccEEe--ccCCCChH--hhhcCc-eEEEec
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRN----ISAAVSNCILKEKKDSWENPVMLD--APVSGGVL--AAEAGT-LTFMVG 155 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~----l~~~~~~~~~~~~~g~~~~~~~~~--~p~~~~~~--~~~~g~-~~~~~~ 155 (316)
+.. +++++|+++++.+..... ..+.+.+. .+ +..++. .++.+... ....+. .+++.+
T Consensus 104 ~~~------~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~-----l~---~~~vv~~~n~~~~~~~~~~~~~g~~~~~~~g 169 (215)
T 2vns_A 104 DQL------AGKILVDVSNPTEQEHLQHRESNAEYLASL-----FP---TCTVVKAFNVISAWTLQAGPRDGNRQVPICG 169 (215)
T ss_dssp HHH------TTCEEEECCCCCHHHHHHCSSCHHHHHHHH-----CT---TSEEEEECTTBCHHHHHTCSCSSCCEEEEEE
T ss_pred Hhc------CCCEEEEeCCCcccccccccccHHHHHHHH-----CC---CCeEEeccccccHhHhcccccCCceeEEEec
Confidence 222 456999999988643211 11222211 00 011111 11111000 011122 356777
Q ss_pred CCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHH
Q 021213 156 GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKIC 190 (316)
Q Consensus 156 ~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~ 190 (316)
++++..+.++++|+.+|.+++++++.+++.+++..
T Consensus 170 ~~~~~~~~v~~ll~~~G~~~~~~g~~~~~~~~e~~ 204 (215)
T 2vns_A 170 DQPEAKRAVSEMALAMGFMPVDMGSLASAWEVEAM 204 (215)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEECCSGGGHHHHHHS
T ss_pred CCHHHHHHHHHHHHHcCCceEeecchhhhhHhhhh
Confidence 89999999999999999999999999999998644
No 82
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.74 E-value=5.2e-18 Score=164.92 Aligned_cols=186 Identities=18% Similarity=0.187 Sum_probs=127.5
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh-----------CC-------------CCCcCCHHHHhhc
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-----------MG-------------VPTKETPFEVAEA 61 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~-----------~g-------------~~~~~~~~~~~~~ 61 (316)
+||+|||+|.||+.||..|+++||+|++||+++++++...+ .| ++.++++ +.+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 391 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRD 391 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTT
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCC
Confidence 68999999999999999999999999999999988765422 22 2345566 56889
Q ss_pred CCEEEEeCCCChhhHHHHhcCCCCcccCCCCCCCeEEEE-cCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCC
Q 021213 62 SDVVITMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLID-SSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSG 140 (316)
Q Consensus 62 adivi~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~-~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~ 140 (316)
||+||+|+|++.+..+.++.++.+.++ ++.++++ +|+.++. .+++.+.+ ..+..| .||.+ |...
T Consensus 392 aDlVIeaVpe~~~vk~~v~~~l~~~~~-----~~~IlasntStl~i~---~la~~~~~--p~~~iG----~hf~~-P~~~ 456 (725)
T 2wtb_A 392 VDMVIEAVIENISLKQQIFADLEKYCP-----QHCILASNTSTIDLN---KIGERTKS--QDRIVG----AHFFS-PAHI 456 (725)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSC-----TTCEEEECCSSSCHH---HHTTTCSC--TTTEEE----EEECS-STTT
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCC-----CCcEEEeCCCCCCHH---HHHHHhcC--CCCEEE----ecCCC-Cccc
Confidence 999999999987622445555444442 4456654 4555554 33332211 111222 67776 3322
Q ss_pred ChHhhhcCceEEEecC---CHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Q 021213 141 GVLAAEAGTLTFMVGG---SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISAS 217 (316)
Q Consensus 141 ~~~~~~~g~~~~~~~~---~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~ 217 (316)
..+..++.+ +++.++++.++++.+|+.++++++. .+. +.|.+.. ..++|++.++++ |++++
T Consensus 457 -------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~-~Gf----i~Nril~---~~~~Ea~~l~~~-G~~~e 520 (725)
T 2wtb_A 457 -------MPLLEIVRTNHTSAQVIVDLLDVGKKIKKTPVVVGNC-TGF----AVNRMFF---PYTQAAMFLVEC-GADPY 520 (725)
T ss_dssp -------CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESS-TTT----THHHHHH---HHHHHHHHHHHT-TCCHH
T ss_pred -------CceEEEEECCCCCHHHHHHHHHHHHHhCCEEEEECCC-ccH----HHHHHHH---HHHHHHHHHHHC-CCCHH
Confidence 122333333 8999999999999999999999873 333 3443332 458899999998 99999
Q ss_pred HHHHHH
Q 021213 218 TLTKIL 223 (316)
Q Consensus 218 ~~~~~~ 223 (316)
++.+++
T Consensus 521 ~id~~~ 526 (725)
T 2wtb_A 521 LIDRAI 526 (725)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999998
No 83
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.73 E-value=7.4e-18 Score=140.22 Aligned_cols=153 Identities=14% Similarity=0.160 Sum_probs=109.6
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.|||+|||+|.||++++..|.++|++|++|+|+++ .++++|+||+|+|. .. +++++.++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~------------------~~~~aD~vi~av~~-~~-~~~v~~~l~ 78 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ------------------ATTLGEIVIMAVPY-PA-LAALAKQYA 78 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC------------------CSSCCSEEEECSCH-HH-HHHHHHHTH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH------------------HhccCCEEEEcCCc-HH-HHHHHHHHH
Confidence 47999999999999999999999999999999865 35689999999994 33 788887664
Q ss_pred CcccCCCCCCCeEEEEcCCCCH--H-------H----HHHHHHHHhhchhhhccCCCCCccEEe------ccCCCChHhh
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDP--Q-------T----SRNISAAVSNCILKEKKDSWENPVMLD------APVSGGVLAA 145 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~--~-------~----~~~l~~~~~~~~~~~~~g~~~~~~~~~------~p~~~~~~~~ 145 (316)
+.+ . +++++++++..+ . + .+.+++.++. ..++. .|.+......
T Consensus 79 ~~~-----~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~~------------~~vv~~~~~~~~p~~~~~~~~ 140 (209)
T 2raf_A 79 TQL-----K-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLPD------------SQVLKAFNTTFAATLQSGQVN 140 (209)
T ss_dssp HHH-----T-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCTT------------SEEEECSTTSCHHHHHHSEET
T ss_pred Hhc-----C-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCCC------------CcEEEeeecccHhhccccccC
Confidence 433 2 568999888433 1 1 3455554432 23444 3322111111
Q ss_pred hcCceEEEec-CCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHH
Q 021213 146 EAGTLTFMVG-GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTM 195 (316)
Q Consensus 146 ~~g~~~~~~~-~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~ 195 (316)
..+...++++ .+++..+.++++|+.+|.+++++++.+.+.++|.+.|.+.
T Consensus 141 g~~~~~~~~~g~~~~~~~~v~~ll~~~G~~~~~~~~i~~a~~~K~i~~l~~ 191 (209)
T 2raf_A 141 GKEPTTVLVAGNDDSAKQRFTRALADSPLEVKDAGKLKRARELEAMGFMQM 191 (209)
T ss_dssp TTEECEEEEEESCHHHHHHHHHHTTTSSCEEEEEESGGGHHHHHHHHHHHH
T ss_pred CCCCceeEEcCCCHHHHHHHHHHHHHcCCceEeCCCHhHHHHhcchHHHHH
Confidence 1123344445 4678899999999999998999999999999999988754
No 84
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.73 E-value=3.5e-17 Score=151.79 Aligned_cols=190 Identities=16% Similarity=0.201 Sum_probs=128.2
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh-----------CC-----------CCCcCCHHHHhhcC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-----------MG-----------VPTKETPFEVAEAS 62 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~-----------~g-----------~~~~~~~~~~~~~a 62 (316)
.+||+|||+|.||+.||..|+++||+|++||+++++++...+ .| ...++++ +.+++|
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 368999999999999999999999999999999987665432 11 1234566 567899
Q ss_pred CEEEEeCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCCh
Q 021213 63 DVVITMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGV 142 (316)
Q Consensus 63 divi~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~ 142 (316)
|+||+|+|++.+..+.++.++.+.++ ++.++++ +|.++... .+++.+.+. .+..| .||. .|....
T Consensus 116 DlVIeaVpe~~~~k~~v~~~l~~~~~-----~~~ii~s-nTs~~~~~-~la~~~~~~--~~~ig----~hf~-~P~~~~- 180 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVFAELSALCK-----PGAFLCT-NTSALNVD-DIASSTDRP--QLVIG----THFF-SPAHVM- 180 (463)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSC-----TTCEEEE-CCSSSCHH-HHHTTSSCG--GGEEE----EEEC-SSTTTC-
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCC-----CCeEEEe-CCCCcCHH-HHHHHhcCC--cceEE----eecC-CCcccc-
Confidence 99999999875423456555544442 4556665 55444433 555543221 11222 5665 343211
Q ss_pred HhhhcCceEEEec--CCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Q 021213 143 LAAEAGTLTFMVG--GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLT 220 (316)
Q Consensus 143 ~~~~~g~~~~~~~--~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~ 220 (316)
....++.+ ++++.++.+.++++.+|+.++++++ ..+. +.|.+... .++|++.+.++ |++++++.
T Consensus 181 -----~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~-~~gf----i~Nrll~~---~~~ea~~l~~~-G~~~~~id 246 (463)
T 1zcj_A 181 -----RLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGN-CYGF----VGNRMLAP---YYNQGFFLLEE-GSKPEDVD 246 (463)
T ss_dssp -----CEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEBCC-STTT----THHHHHHH---HHHHHHHHHHT-TCCHHHHH
T ss_pred -----eeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEECC-CccH----HHHHHHHH---HHHHHHHHHHc-CCCHHHHH
Confidence 11223333 5899999999999999999999987 2333 34443333 35899999887 89999998
Q ss_pred HHHh
Q 021213 221 KILN 224 (316)
Q Consensus 221 ~~~~ 224 (316)
+++.
T Consensus 247 ~~~~ 250 (463)
T 1zcj_A 247 GVLE 250 (463)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8886
No 85
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.70 E-value=5.4e-17 Score=142.16 Aligned_cols=198 Identities=15% Similarity=0.161 Sum_probs=141.9
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHH-----------HhCC--------------CCCcCCHHHHhh
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMF-----------SDMG--------------VPTKETPFEVAE 60 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l-----------~~~g--------------~~~~~~~~~~~~ 60 (316)
.||+|||+|.||+.||..++.+|++|++||++++.++.. .+.| +..+++..++++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~~ 86 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAVE 86 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHTT
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHhc
Confidence 689999999999999999999999999999998864332 2222 234567888999
Q ss_pred cCCEEEEeCCCChhhHHHHhcCCCCcccCCCCCCCeEEE-EcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCC
Q 021213 61 ASDVVITMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLI-DSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVS 139 (316)
Q Consensus 61 ~adivi~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi-~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~ 139 (316)
+||+||.|+|...+--++++.+++.+.+ ++.++- |+|+.++. .+++.+.+ +.+..| .||.++|..
T Consensus 87 ~ad~ViEav~E~l~iK~~lf~~l~~~~~-----~~aIlaSNTSsl~is---~ia~~~~~--p~r~ig----~HffNP~~~ 152 (319)
T 3ado_A 87 GVVHIQECVPENLDLKRKIFAQLDSIVD-----DRVVLSSSSSCLLPS---KLFTGLAH--VKQCIV----AHPVNPPYY 152 (319)
T ss_dssp TEEEEEECCCSCHHHHHHHHHHHHTTCC-----SSSEEEECCSSCCHH---HHHTTCTT--GGGEEE----EEECSSTTT
T ss_pred cCcEEeeccccHHHHHHHHHHHHHHHhh-----hcceeehhhhhccch---hhhhhccC--CCcEEE----ecCCCCccc
Confidence 9999999999987734567777766664 333333 33333343 44443332 223444 788888876
Q ss_pred CChHhhhcCceEEEecCCHHHHHHHHHHHHhcCCCeEee-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Q 021213 140 GGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYC-GGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISAST 218 (316)
Q Consensus 140 ~~~~~~~~g~~~~~~~~~~~~~~~v~~ll~~~g~~v~~~-g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~ 218 (316)
-...+...+..+ +++..+++..+++.+|++++.+ .+ -.|.. .|-+. ...+.|++.+.+..+.++++
T Consensus 153 m~LVEiv~g~~T-----s~~~~~~~~~~~~~~gk~pv~v~kd-~pGFi----~NRl~---~~~~~EA~~lv~eGvas~ed 219 (319)
T 3ado_A 153 IPLVELVPHPET-----SPATVDRTHALMRKIGQSPVRVLKE-IDGFV----LNRLQ---YAIISEAWRLVEEGIVSPSD 219 (319)
T ss_dssp CCEEEEEECTTC-----CHHHHHHHHHHHHHTTCEEEECSSC-CTTTT----HHHHH---HHHHHHHHHHHHTTSSCHHH
T ss_pred cchHHhcCCCCC-----cHHHHHHHHHHHHHhCCccCCcCCC-CCCEe----HHHHH---HHHHHHHHHHHHhCCCCHHH
Confidence 655555555555 9999999999999999887655 44 34444 45544 44567999999998999999
Q ss_pred HHHHHhhccCCc
Q 021213 219 LTKILNSSSARC 230 (316)
Q Consensus 219 ~~~~~~~~~~~s 230 (316)
+..++..+.+..
T Consensus 220 ID~~~~~g~g~~ 231 (319)
T 3ado_A 220 LDLVMSDGLGMR 231 (319)
T ss_dssp HHHHHHTTHHHH
T ss_pred HHHHHHhCCCCC
Confidence 999988766433
No 86
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.63 E-value=9.1e-15 Score=133.72 Aligned_cols=90 Identities=16% Similarity=0.134 Sum_probs=71.5
Q ss_pred CCeEEEEccchhhHHHHHHHHh-CCCeEEEEe---CChhHHHHH-HhCC---------C---------C-CcCCHHHHhh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMK-AGYKMAVHD---VNCNVMKMF-SDMG---------V---------P-TKETPFEVAE 60 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~-~g~~V~~~~---r~~~~~~~l-~~~g---------~---------~-~~~~~~~~~~ 60 (316)
+|||+|||+|.||+++|..|++ +||+|++|+ |++++++.+ ++.| . . .+++++++++
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 81 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAIS 81 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHT
T ss_pred CceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhC
Confidence 3699999999999999999998 599999999 888888774 4332 1 1 4567888889
Q ss_pred cCCEEEEeCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEc
Q 021213 61 ASDVVITMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDS 101 (316)
Q Consensus 61 ~adivi~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~ 101 (316)
++|+||+|||+.. .++++..+.+.+. ++++|++.
T Consensus 82 ~aD~Vilav~~~~--~~~v~~~l~~~l~-----~~~ivv~~ 115 (404)
T 3c7a_A 82 GADVVILTVPAFA--HEGYFQAMAPYVQ-----DSALIVGL 115 (404)
T ss_dssp TCSEEEECSCGGG--HHHHHHHHTTTCC-----TTCEEEET
T ss_pred CCCEEEEeCchHH--HHHHHHHHHhhCC-----CCcEEEEc
Confidence 9999999999876 6888887766653 34577764
No 87
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.61 E-value=3.9e-15 Score=124.17 Aligned_cols=156 Identities=12% Similarity=0.060 Sum_probs=107.6
Q ss_pred CCCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcC
Q 021213 3 FFDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNG 82 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~ 82 (316)
...|||+|||+|.||++|+..|.++||+|++|++. ++ +++|| |+|+|.+. +.+++.+
T Consensus 4 ~~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~------------------~~-~~~aD--ilavP~~a--i~~vl~~ 60 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP------------------ED-IRDFE--LVVIDAHG--VEGYVEK 60 (232)
T ss_dssp CCCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG------------------GG-GGGCS--EEEECSSC--HHHHHHH
T ss_pred CCCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH------------------HH-hccCC--EEEEcHHH--HHHHHHH
Confidence 34589999999999999999999999999999983 12 56799 99999875 7888876
Q ss_pred CCCcccCCCCCCCeEEEEcCCCCH-HHHHHHHHHHhhchhhhccCCCCCccEE-eccCCCChHhhhcCceEEEecCCHHH
Q 021213 83 PNGLLQGGNSVRPQLLIDSSTIDP-QTSRNISAAVSNCILKEKKDSWENPVML-DAPVSGGVLAAEAGTLTFMVGGSEDA 160 (316)
Q Consensus 83 ~~~~~~~~~~~~~~~vi~~st~~~-~~~~~l~~~~~~~~~~~~~g~~~~~~~~-~~p~~~~~~~~~~g~~~~~~~~~~~~ 160 (316)
+.+.+ .++++++|+|+..+ ...+.+ ... +..|+ .+|+.+.+ ..+.+.+++.
T Consensus 61 l~~~l-----~~g~ivvd~sgs~~~~vl~~~----~~~----------g~~fvg~HPm~g~~--------~~i~a~d~~a 113 (232)
T 3dfu_A 61 LSAFA-----RRGQMFLHTSLTHGITVMDPL----ETS----------GGIVMSAHPIGQDR--------WVASALDELG 113 (232)
T ss_dssp HHTTC-----CTTCEEEECCSSCCGGGGHHH----HHT----------TCEEEEEEEEETTE--------EEEEESSHHH
T ss_pred HHHhc-----CCCCEEEEECCcCHHHHHHHH----HhC----------CCcEEEeeeCCCCc--------eeeeCCCHHH
Confidence 65443 35679999865443 222222 121 14555 47886542 4445568889
Q ss_pred HHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021213 161 YQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQ 210 (316)
Q Consensus 161 ~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~ 210 (316)
.+.++++++.+|.+++.+++.......-.+ .........+.++..+.+
T Consensus 114 ~~~l~~L~~~lG~~vv~~~~~~hd~~~AAv--sh~nhLv~L~~~A~~ll~ 161 (232)
T 3dfu_A 114 ETIVGLLVGELGGSIVEIADDKRAQLAAAL--TYAGFLSTLQRDASYFLD 161 (232)
T ss_dssp HHHHHHHHHHTTCEECCCCGGGHHHHHHHH--HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEEeCHHHHhHHHHHH--HHHHHHHHHHHHHHHHHH
Confidence 999999999999999998874443332111 123334555667766663
No 88
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.60 E-value=7.7e-15 Score=130.77 Aligned_cols=192 Identities=16% Similarity=0.135 Sum_probs=120.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhH-HHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhc-C
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNV-MKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYN-G 82 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~-~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~-~ 82 (316)
.|+|+|||+|.||.+++..|.+.|++|++|+|++++ .+...+.|+... ++.+++++||+||+|+|... ..+++. +
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~-~~~e~~~~aDvVilavp~~~--~~~v~~~~ 92 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA-DVKTAVAAADVVMILTPDEF--QGRLYKEE 92 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE-CHHHHHHTCSEEEECSCHHH--HHHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc-cHHHHHhcCCEEEEeCCcHH--HHHHHHHH
Confidence 478999999999999999999999999999998766 566667787665 88899999999999999765 577876 6
Q ss_pred CCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccE-EeccCCCChH---hhh---cCceEEEe-
Q 021213 83 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVM-LDAPVSGGVL---AAE---AGTLTFMV- 154 (316)
Q Consensus 83 ~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~-~~~p~~~~~~---~~~---~g~~~~~~- 154 (316)
+.+.++ ++++++++++. .. .+.+.... .+..+ ...| .+... ... .|...++.
T Consensus 93 i~~~l~-----~~~ivi~~~gv--~~--~~~~~~~~----------~~~~vv~~~P-~gp~~a~~~l~~~G~g~~~ii~~ 152 (338)
T 1np3_A 93 IEPNLK-----KGATLAFAHGF--SI--HYNQVVPR----------ADLDVIMIAP-KAPGHTVRSEFVKGGGIPDLIAI 152 (338)
T ss_dssp TGGGCC-----TTCEEEESCCH--HH--HTTSSCCC----------TTCEEEEEEE-SSCSHHHHHHHHTTCCCCEEEEE
T ss_pred HHhhCC-----CCCEEEEcCCc--hh--HHHhhcCC----------CCcEEEeccC-CCCchhHHHHHhccCCCeEEEEe
Confidence 655443 45688887532 21 11111101 11223 2345 22211 111 25444433
Q ss_pred --cCCHHHHHHHHHHHHhcCC-C--eEeeCCcchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 021213 155 --GGSEDAYQAAKPLFLSMGK-N--TIYCGGAGNGAAAKICNN-LTMAVSMLGVSEALTLGQSLGISASTL 219 (316)
Q Consensus 155 --~~~~~~~~~v~~ll~~~g~-~--v~~~g~~g~a~~~k~~~n-~~~~~~~~~~~Ea~~l~~~~G~~~~~~ 219 (316)
..+.+..+.+..+++.+|. + ++.+.............+ .+....-..+..++....+.|++++..
T Consensus 153 ~~~~~~~a~~~~~~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~Gl~~~~a 223 (338)
T 1np3_A 153 YQDASGNAKNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMA 223 (338)
T ss_dssp EECSSSCHHHHHHHHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred cCCCCHHHHHHHHHHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH
Confidence 2467788999999999998 4 666653223333333333 111112223333333455789988755
No 89
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.41 E-value=8.7e-13 Score=127.86 Aligned_cols=189 Identities=15% Similarity=0.201 Sum_probs=128.3
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh---------------C-------CCCCcCCHHHHhhcCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD---------------M-------GVPTKETPFEVAEASD 63 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~---------------~-------g~~~~~~~~~~~~~ad 63 (316)
.||+|||+|.||..||..++.+|++|+++|++++.++...+ . .+..+++.+ .+++||
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aD 395 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTK-ELSTVD 395 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGG-GGGSCS
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHH-HHhhCC
Confidence 58999999999999999999999999999999886433221 0 022334444 468999
Q ss_pred EEEEeCCCChhhHHHHhcCCCCcccCCCCCCCeEEE-EcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCCCCh
Q 021213 64 VVITMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLI-DSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGV 142 (316)
Q Consensus 64 ivi~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi-~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~ 142 (316)
+||.|||.+.+--++++.+++.+++ ++.++- |+|+.++. .+++.+.+ +.+..| .||.++|..-..
T Consensus 396 lVIEAV~E~l~iK~~vf~~le~~~~-----~~aIlASNTSsl~i~---~ia~~~~~--p~r~ig----~HFfnP~~~m~L 461 (742)
T 3zwc_A 396 LVVEAVFEDMNLKKKVFAELSALCK-----PGAFLCTNTSALNVD---DIASSTDR--PQLVIG----THFFSPAHVMRL 461 (742)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHHSC-----TTCEEEECCSSSCHH---HHHTTSSC--GGGEEE----EECCSSTTTCCE
T ss_pred EEEEeccccHHHHHHHHHHHhhcCC-----CCceEEecCCcCChH---HHHhhcCC--cccccc----ccccCCCCCCce
Confidence 9999999987734456776666663 333333 33444443 44443322 223444 788887766555
Q ss_pred HhhhcCceEEEecCCHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Q 021213 143 LAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKI 222 (316)
Q Consensus 143 ~~~~~g~~~~~~~~~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~ 222 (316)
.+...+..+ +++..+.+..+.+.+|+.++.+.+. .+.. .|-+. ...+.|++.+... |.+++++.++
T Consensus 462 VEvi~g~~T-----s~e~~~~~~~~~~~lgK~pV~vkd~-pGFi----~NRi~---~~~~~ea~~l~~e-G~~~~~id~a 527 (742)
T 3zwc_A 462 LEVIPSRYS-----SPTTIATVMSLSKKIGKIGVVVGNC-YGFV----GNRML---APYYNQGFFLLEE-GSKPEDVDGV 527 (742)
T ss_dssp EEEEECSSC-----CHHHHHHHHHHHHHTTCEEEECCCS-TTTT----HHHHH---HHHHHHHHHHHHT-TCCHHHHHHH
T ss_pred EEEecCCCC-----CHHHHHHHHHHHHHhCCCCcccCCC-CCcc----HHHHh---hHHHHHHHHHHHc-CCCHHHHHHH
Confidence 555555545 9999999999999999999888772 4444 45443 3345688777765 6777776665
Q ss_pred H
Q 021213 223 L 223 (316)
Q Consensus 223 ~ 223 (316)
+
T Consensus 528 ~ 528 (742)
T 3zwc_A 528 L 528 (742)
T ss_dssp H
T ss_pred H
Confidence 5
No 90
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=99.39 E-value=3.4e-15 Score=131.61 Aligned_cols=109 Identities=13% Similarity=0.200 Sum_probs=83.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhC-CC-eEEEEeCChhHHHHHHhC-C--CCCcCCHHHHhhcCCEEEEeCCCChhhHHHH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKA-GY-KMAVHDVNCNVMKMFSDM-G--VPTKETPFEVAEASDVVITMLPSSSHQVLDV 79 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~-g~-~V~~~~r~~~~~~~l~~~-g--~~~~~~~~~~~~~adivi~~vp~~~~~~~~v 79 (316)
.++|+|||+|.||..++..|.+. |+ +|.+|||++++.+.+.+. + +..+++++++++++|+||+|+|.. +.+
T Consensus 135 ~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~----~~v 210 (312)
T 2i99_A 135 SEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLAT----EPI 210 (312)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCS----SCC
T ss_pred CcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCC----Ccc
Confidence 47899999999999999999886 75 899999999999888764 5 667789999999999999999953 344
Q ss_pred hcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEe
Q 021213 80 YNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLD 135 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~ 135 (316)
+.. +.+ .++++|+++++..|.. +++.+.+.+.+ ..|+|
T Consensus 211 ~~~--~~l-----~~g~~vi~~g~~~p~~-~el~~~~~~~g----------~~~vD 248 (312)
T 2i99_A 211 LFG--EWV-----KPGAHINAVGASRPDW-RELDDELMKEA----------VLYVD 248 (312)
T ss_dssp BCG--GGS-----CTTCEEEECCCCSTTC-CSBCHHHHHHS----------EEEES
T ss_pred cCH--HHc-----CCCcEEEeCCCCCCCc-eeccHHHHhcC----------EEEEC
Confidence 432 222 3567999998888864 45554444322 57888
No 91
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.37 E-value=1.5e-12 Score=115.39 Aligned_cols=109 Identities=18% Similarity=0.219 Sum_probs=85.7
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.|...|++|++|||++++.+...+.|+..+ ++++++++||+|++++|.... ++.++. +
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~l~e~l~~aDvVi~~vp~~~~-t~~~i~--~ 230 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV-STPELAAQSDFIVVACSLTPA-TEGLCN--K 230 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC-CHHHHHHHCSEEEECCCCCTT-TTTCBS--H
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC-CHHHHHhhCCEEEEeCCCChH-HHHhhC--H
Confidence 479999999999999999999999999999998877666666676655 889999999999999998654 455442 1
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
..++. ..++.++||++++.+...+.+.+.+.+.
T Consensus 231 ~~~~~--mk~gailIn~srg~~v~~~aL~~aL~~~ 263 (330)
T 2gcg_A 231 DFFQK--MKETAVFINISRGDVVNQDDLYQALASG 263 (330)
T ss_dssp HHHHH--SCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred HHHhc--CCCCcEEEECCCCcccCHHHHHHHHHcC
Confidence 12221 3356799999999877777888777653
No 92
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.35 E-value=5.6e-12 Score=114.49 Aligned_cols=199 Identities=14% Similarity=0.099 Sum_probs=115.0
Q ss_pred CeEEEEccchhhHHHHHHHHhC------CCeEEEEeCCh-hHHHHHHhCCCCC----cCCHHHHhhcCCEEEEeCCCChh
Q 021213 6 QSVGFIGLGNMGFRMASNLMKA------GYKMAVHDVNC-NVMKMFSDMGVPT----KETPFEVAEASDVVITMLPSSSH 74 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~------g~~V~~~~r~~-~~~~~l~~~g~~~----~~~~~~~~~~adivi~~vp~~~~ 74 (316)
+||+|||+|+||.++|.+|.++ |++|++++++. ...+...+.|+.. +.++.+++++||+||+++|...
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaVP~~~- 133 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLISDAA- 133 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECSCHHH-
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECCChHH-
Confidence 7999999999999999999999 99998776653 4456666788775 3689999999999999999765
Q ss_pred hHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHH---HHhhchhhhccCCCCCccEEeccCCC--ChHhhh---
Q 021213 75 QVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISA---AVSNCILKEKKDSWENPVMLDAPVSG--GVLAAE--- 146 (316)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~---~~~~~~~~~~~g~~~~~~~~~~p~~~--~~~~~~--- 146 (316)
..+++.++.+.++ ++++++.+..... ..+.+ .++... .. ...+++.|... ......
T Consensus 134 -~~eVl~eI~p~LK-----~GaILs~AaGf~I---~~le~~~i~~p~dv---~V----VrVmPNtPg~~VR~~y~~G~~~ 197 (525)
T 3fr7_A 134 -QADNYEKIFSHMK-----PNSILGLSHGFLL---GHLQSAGLDFPKNI---SV----IAVCPKGMGPSVRRLYVQGKEI 197 (525)
T ss_dssp -HHHHHHHHHHHSC-----TTCEEEESSSHHH---HHHHHTTCCCCTTS---EE----EEEEESSCHHHHHHHHHHHTTS
T ss_pred -HHHHHHHHHHhcC-----CCCeEEEeCCCCH---HHHhhhcccCCCCC---cE----EEEecCCCchhHHHHHhccccc
Confidence 3567765444442 5566544443222 23332 111110 00 01233333221 001111
Q ss_pred --cCceEEEe-cC--CHHHHHHHHHHHHhcCCCeEeeCCcchHHHHHH------HHHHHHHHHHHHHHHHHHHHHHcCCC
Q 021213 147 --AGTLTFMV-GG--SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKI------CNNLTMAVSMLGVSEALTLGQSLGIS 215 (316)
Q Consensus 147 --~g~~~~~~-~~--~~~~~~~v~~ll~~~g~~v~~~g~~g~a~~~k~------~~n~~~~~~~~~~~Ea~~l~~~~G~~ 215 (316)
.|...+++ .. +.+..+.+..+++++|...++-...-.-.-..+ +.+...+ .+.+..|+ +.+.|++
T Consensus 198 ~g~Gv~~liAv~qd~tgea~e~alala~aiG~~~vieTtf~eE~e~DLfgeqtvLsG~~pA-lieA~~d~---lVe~G~~ 273 (525)
T 3fr7_A 198 NGAGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHG-IVEALFRR---YTEQGMD 273 (525)
T ss_dssp TTCSCCEEEEEEECSSSCHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHTTTTHHHHH-HHHHHHHH---HHHTTCC
T ss_pred ccCCccEEEEcCCCCCHHHHHHHHHHHHHCCCCeeeeeeeeeehhHhhhhhHhhhcCcHHH-HHHHHHHH---HHHcCCC
Confidence 45543333 23 347889999999999986322112100000000 1111111 12333333 6789999
Q ss_pred HHHHHHHHhh
Q 021213 216 ASTLTKILNS 225 (316)
Q Consensus 216 ~~~~~~~~~~ 225 (316)
++..+....+
T Consensus 274 pe~Ay~~~~q 283 (525)
T 3fr7_A 274 EEMAYKNTVE 283 (525)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9987666544
No 93
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=99.34 E-value=1.1e-13 Score=117.20 Aligned_cols=159 Identities=20% Similarity=0.124 Sum_probs=105.0
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeE-EEEeCChhHHHHHHhCCCCCcCCHHHHh-hcCCEEEEeCCCChhhHHHHhcCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKM-AVHDVNCNVMKMFSDMGVPTKETPFEVA-EASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V-~~~~r~~~~~~~l~~~g~~~~~~~~~~~-~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
|||||||+|.||..+++.|.+.|+++ .+||+++ +.+. .++|+++++ .++|+|++|+|++.+ .+++.
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~-~~~~-------~~~~~~~l~~~~~DvVv~~~~~~~~--~~~~~-- 68 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRG-EHEK-------MVRGIDEFLQREMDVAVEAASQQAV--KDYAE-- 68 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSC-CCTT-------EESSHHHHTTSCCSEEEECSCHHHH--HHHHH--
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCc-chhh-------hcCCHHHHhcCCCCEEEECCCHHHH--HHHHH--
Confidence 58999999999999999999999997 6999985 2211 567899988 689999999997754 44432
Q ss_pred CCcccCCCCCCCeEEEEcCCCCHHH---HHHHHHHHhhchhhhccCCCCCccEEeccCCCChHhhhcCceEEEecCCHHH
Q 021213 84 NGLLQGGNSVRPQLLIDSSTIDPQT---SRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDA 160 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~~~~---~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~ 160 (316)
..++ .++.+++.++..+.. .+++.+...+.+. ..+++.+..++......+.. +++...
T Consensus 69 -~~l~-----~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~---------~~~i~~~~~g~~~~~~~~~~----~~~~~~ 129 (236)
T 2dc1_A 69 -KILK-----AGIDLIVLSTGAFADRDFLSRVREVCRKTGR---------RVYIASGAIGGLDAIFSASE----LIEEIV 129 (236)
T ss_dssp -HHHH-----TTCEEEESCGGGGGSHHHHHHHHHHHHHHCC---------CEEECCTTCSCHHHHHHTGG----GEEEEE
T ss_pred -HHHH-----CCCcEEEECcccCChHHHHHHHHHHHHhcCC---------eEEecCccccChHHHHHhhc----cccEEE
Confidence 1232 456788887765332 2566665554321 24789999988876665553 222222
Q ss_pred HHHHHHHHHhcCCCeEeeCCcchH-HHHHHHHHHHH
Q 021213 161 YQAAKPLFLSMGKNTIYCGGAGNG-AAAKICNNLTM 195 (316)
Q Consensus 161 ~~~v~~ll~~~g~~v~~~g~~g~a-~~~k~~~n~~~ 195 (316)
+...++.++..+.++++.|+.+.+ ..+|...|...
T Consensus 130 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~n~~~ 165 (236)
T 2dc1_A 130 LTTRKNWRQFGRKGVIFEGSASEAAQKFPKNLNVAA 165 (236)
T ss_dssp EEEEEEGGGTTSCEEEEEEEHHHHHHHSTTCCHHHH
T ss_pred EEEEcChHHcCcceEEEeccHHHHHHHCCchHHHHH
Confidence 222233345567777888875433 46666666654
No 94
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.33 E-value=6.3e-12 Score=111.61 Aligned_cols=107 Identities=15% Similarity=0.230 Sum_probs=83.9
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.|...|++|++|||++++ +...+.|+.. .++++++++||+|++|+|.... ++.++..
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~~l~~~l~~aDvVil~vp~~~~-t~~~i~~-- 224 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEF-KPLEDLLRESDFVVLAVPLTRE-TYHLINE-- 224 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEE-CCHHHHHHHCSEEEECCCCCTT-TTTCBCH--
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCccc-CCHHHHHhhCCEEEECCCCChH-HHHhhCH--
Confidence 479999999999999999999999999999999877 5555556654 5888999999999999998764 4554421
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 118 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~ 118 (316)
..++. +.++.++||++++.+...+.+.+.+..
T Consensus 225 ~~~~~--mk~~ailIn~srg~~v~~~aL~~aL~~ 256 (334)
T 2dbq_A 225 ERLKL--MKKTAILINIARGKVVDTNALVKALKE 256 (334)
T ss_dssp HHHHH--SCTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred HHHhc--CCCCcEEEECCCCcccCHHHHHHHHHh
Confidence 12221 336679999999887777778877765
No 95
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.30 E-value=3.1e-12 Score=114.15 Aligned_cols=109 Identities=17% Similarity=0.212 Sum_probs=86.8
Q ss_pred CCeEEEEccchhhHHHHHHHH-hCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLM-KAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~-~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
.++|||||+|.||..+|+.+. ..|++|++|||++++.+...+.|+..++++++++++||+|++|+|...+ ++.++..
T Consensus 163 g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~-t~~li~~- 240 (348)
T 2w2k_A 163 GHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKL-THHLIDE- 240 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGG-GTTCBCH-
T ss_pred CCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChH-HHHHhhH-
Confidence 478999999999999999999 9999999999998776655556776666899999999999999998754 5555431
Q ss_pred CCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 021213 84 NGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 118 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~ 118 (316)
..++. +.++.++||++++.+...+.+.+.+.+
T Consensus 241 -~~l~~--mk~gailin~srg~~vd~~aL~~aL~~ 272 (348)
T 2w2k_A 241 -AFFAA--MKPGSRIVNTARGPVISQDALIAALKS 272 (348)
T ss_dssp -HHHHH--SCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred -HHHhc--CCCCCEEEECCCCchhCHHHHHHHHHh
Confidence 12221 346789999999988777788887765
No 96
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.30 E-value=2.4e-12 Score=111.44 Aligned_cols=105 Identities=16% Similarity=0.279 Sum_probs=83.3
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||+++..+. ....+++++++++||+|++++|.... ++.++. +
T Consensus 122 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----~~~~~~l~ell~~aDiV~l~~P~t~~-t~~li~--~ 193 (290)
T 3gvx_A 122 GKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----DVISESPADLFRQSDFVLIAIPLTDK-TRGMVN--S 193 (290)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----SEECSSHHHHHHHCSEEEECCCCCTT-TTTCBS--H
T ss_pred cchheeeccCchhHHHHHHHHhhCcEEEEEecccccccc-----ccccCChHHHhhccCeEEEEeecccc-chhhhh--H
Confidence 479999999999999999999999999999998765322 34556899999999999999997554 555542 1
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
+.++. ++++.++||++++.+...+.+.+.+...
T Consensus 194 ~~l~~--mk~gailIN~aRG~~vd~~aL~~aL~~g 226 (290)
T 3gvx_A 194 RLLAN--ARKNLTIVNVARADVVSKPDMIGFLKER 226 (290)
T ss_dssp HHHTT--CCTTCEEEECSCGGGBCHHHHHHHHHHC
T ss_pred HHHhh--hhcCceEEEeehhcccCCcchhhhhhhc
Confidence 23332 4577899999999988788888888764
No 97
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.30 E-value=3.3e-12 Score=113.59 Aligned_cols=110 Identities=17% Similarity=0.267 Sum_probs=89.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||++...+...+.|+...+++++++++||+|++++|.... ++.++. +
T Consensus 164 gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~-t~~li~--~ 240 (351)
T 3jtm_A 164 GKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEK-TRGMFN--K 240 (351)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTT-TTTCBS--H
T ss_pred CCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHH-HHHhhc--H
Confidence 5799999999999999999999999999999987666666677887778999999999999999997544 455442 1
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
..++. +.++.++||++.+.+-..+.+.+.+...
T Consensus 241 ~~l~~--mk~gailIN~aRG~~vde~aL~~aL~~g 273 (351)
T 3jtm_A 241 ELIGK--LKKGVLIVNNARGAIMERQAVVDAVESG 273 (351)
T ss_dssp HHHHH--SCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred HHHhc--CCCCCEEEECcCchhhCHHHHHHHHHhC
Confidence 23332 4578899999999887778888888764
No 98
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.27 E-value=6e-12 Score=112.02 Aligned_cols=109 Identities=17% Similarity=0.194 Sum_probs=87.3
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||++. .+...+.|+..++++++++++||+|++++|.... ++.++. .
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~-t~~li~--~ 235 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENS-KERARADGFAVAESKDALFEQSDVLSVHLRLNDE-TRSIIT--V 235 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHH-HHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTT-TTTCBC--H
T ss_pred CCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCC-HHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHH-HHHhhC--H
Confidence 47999999999999999999999999999999863 3555667887777999999999999999997654 555442 1
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
..++. ++++.++||++.+.+-..+.+.+.+...
T Consensus 236 ~~l~~--mk~gailIN~aRg~~vd~~aL~~aL~~g 268 (352)
T 3gg9_A 236 ADLTR--MKPTALFVNTSRAELVEENGMVTALNRG 268 (352)
T ss_dssp HHHTT--SCTTCEEEECSCGGGBCTTHHHHHHHHT
T ss_pred HHHhh--CCCCcEEEECCCchhhcHHHHHHHHHhC
Confidence 23332 4577899999999877777888888764
No 99
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.27 E-value=8.6e-12 Score=109.99 Aligned_cols=109 Identities=12% Similarity=0.176 Sum_probs=84.4
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeC-ChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDV-NCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r-~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
.++|||||+|.||..+|+.+...|++|++||| ++++. ...+.|+...+++++++++||+|++|+|.... ++.++..
T Consensus 146 g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~-t~~~i~~- 222 (320)
T 1gdh_A 146 NKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DEASYQATFHDSLDSLLSVSQFFSLNAPSTPE-TRYFFNK- 222 (320)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HHHHHTCEECSSHHHHHHHCSEEEECCCCCTT-TTTCBSH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hhhhcCcEEcCCHHHHHhhCCEEEEeccCchH-HHhhcCH-
Confidence 47899999999999999999999999999999 87763 44456776666899999999999999997654 4554421
Q ss_pred CCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 84 NGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
..++. +.++.++||++++.+-..+.+.+.+...
T Consensus 223 -~~l~~--mk~gailIn~arg~~vd~~aL~~aL~~g 255 (320)
T 1gdh_A 223 -ATIKS--LPQGAIVVNTARGDLVDNELVVAALEAG 255 (320)
T ss_dssp -HHHTT--SCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred -HHHhh--CCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 12222 3467899999998766667777777653
No 100
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.27 E-value=6.8e-12 Score=111.53 Aligned_cols=109 Identities=17% Similarity=0.196 Sum_probs=85.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.|...|++|++|||++++. ...+.|+..+.++++++++||+|++++|.... ++.++. +
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~-t~~li~--~ 243 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDG-VERALGLQRVSTLQDLLFHSDCVTLHCGLNEH-NHHLIN--D 243 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTT-HHHHHTCEECSSHHHHHHHCSEEEECCCCCTT-CTTSBS--H
T ss_pred CCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hHhhcCCeecCCHHHHHhcCCEEEEcCCCCHH-HHHHhH--H
Confidence 4789999999999999999999999999999986642 22345666667899999999999999997654 555542 1
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
..++. +.++.++||++++.+...+.+.+.+...
T Consensus 244 ~~l~~--mk~gailIN~arg~~vd~~aL~~aL~~g 276 (347)
T 1mx3_A 244 FTVKQ--MRQGAFLVNTARGGLVDEKALAQALKEG 276 (347)
T ss_dssp HHHTT--SCTTEEEEECSCTTSBCHHHHHHHHHHT
T ss_pred HHHhc--CCCCCEEEECCCChHHhHHHHHHHHHhC
Confidence 22322 4467899999999987778888888764
No 101
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.25 E-value=1e-11 Score=109.91 Aligned_cols=105 Identities=17% Similarity=0.285 Sum_probs=66.3
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||++++ ..+.....++++++++||+|++++|.... ++.++. +
T Consensus 171 gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~-----~~~~~~~~sl~ell~~aDvVil~vP~t~~-t~~li~--~ 242 (340)
T 4dgs_A 171 GKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLS-----GVDWIAHQSPVDLARDSDVLAVCVAASAA-TQNIVD--A 242 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCT-----TSCCEECSSHHHHHHTCSEEEECC-----------C--H
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCccc-----ccCceecCCHHHHHhcCCEEEEeCCCCHH-HHHHhh--H
Confidence 479999999999999999999999999999998765 23445567899999999999999996554 566552 1
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
+.++. +.++.++||++.+.+-..+.+.+.+...
T Consensus 243 ~~l~~--mk~gailIN~aRG~vvde~aL~~aL~~g 275 (340)
T 4dgs_A 243 SLLQA--LGPEGIVVNVARGNVVDEDALIEALKSG 275 (340)
T ss_dssp HHHHH--TTTTCEEEECSCC--------------C
T ss_pred HHHhc--CCCCCEEEECCCCcccCHHHHHHHHHcC
Confidence 22322 3467899999999988778888877653
No 102
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.24 E-value=1.2e-11 Score=111.44 Aligned_cols=111 Identities=14% Similarity=0.129 Sum_probs=87.3
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
..++|||||+|.||..+|+.+...|++|++|||++...+...+.|+....++++++++||+|++++|.... ++.++.
T Consensus 190 ~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~-t~~li~-- 266 (393)
T 2nac_A 190 EAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPE-TEHMIN-- 266 (393)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTT-TTTCBS--
T ss_pred CCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchH-HHHHhh--
Confidence 34799999999999999999999999999999987665555566776667899999999999999997654 555542
Q ss_pred CCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 84 NGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
+..++. +.++.++||++.+.+-..+.+.+.+...
T Consensus 267 ~~~l~~--mk~gailIN~aRG~~vde~aL~~aL~~g 300 (393)
T 2nac_A 267 DETLKL--FKRGAYIVNTARGKLCDRDAVARALESG 300 (393)
T ss_dssp HHHHTT--SCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred HHHHhh--CCCCCEEEECCCchHhhHHHHHHHHHcC
Confidence 122322 4467899999998876667788877653
No 103
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.24 E-value=1.1e-11 Score=109.79 Aligned_cols=108 Identities=16% Similarity=0.213 Sum_probs=85.0
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||++...+... |...++++++++++||+|++++|...+ .+.++. +
T Consensus 173 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g~~~~~~l~ell~~sDvV~l~~Plt~~-T~~li~--~ 247 (345)
T 4g2n_A 173 GRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEE--GAIYHDTLDSLLGASDIFLIAAPGRPE-LKGFLD--H 247 (345)
T ss_dssp TCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--TCEECSSHHHHHHTCSEEEECSCCCGG-GTTCBC--H
T ss_pred CCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--CCeEeCCHHHHHhhCCEEEEecCCCHH-HHHHhC--H
Confidence 47999999999999999999999999999999875443322 666667999999999999999997654 555542 1
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
..++. ++++.++||++.+..-..+.+.+.+...
T Consensus 248 ~~l~~--mk~gailIN~aRG~~vde~aL~~aL~~g 280 (345)
T 4g2n_A 248 DRIAK--IPEGAVVINISRGDLINDDALIEALRSK 280 (345)
T ss_dssp HHHHH--SCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred HHHhh--CCCCcEEEECCCCchhCHHHHHHHHHhC
Confidence 23332 4578899999999877777888877653
No 104
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.24 E-value=2.2e-11 Score=107.73 Aligned_cols=108 Identities=15% Similarity=0.198 Sum_probs=84.6
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||++++ +...+.|+.. .++++++++||+|++|+|.... ++.++. +
T Consensus 165 g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~~l~ell~~aDvV~l~~P~t~~-t~~li~--~ 239 (335)
T 2g76_A 165 GKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP-EVSASFGVQQ-LPLEEIWPLCDFITVHTPLLPS-TTGLLN--D 239 (335)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHHTTCEE-CCHHHHGGGCSEEEECCCCCTT-TTTSBC--H
T ss_pred cCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCcee-CCHHHHHhcCCEEEEecCCCHH-HHHhhC--H
Confidence 479999999999999999999999999999998776 3455667654 4899999999999999998754 555542 1
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
..++. +.++.++||++++.+-..+.+.+.+...
T Consensus 240 ~~l~~--mk~gailIN~arg~vvd~~aL~~aL~~g 272 (335)
T 2g76_A 240 NTFAQ--CKKGVRVVNCARGGIVDEGALLRALQSG 272 (335)
T ss_dssp HHHTT--SCTTEEEEECSCTTSBCHHHHHHHHHHT
T ss_pred HHHhh--CCCCcEEEECCCccccCHHHHHHHHHhC
Confidence 23332 4577899999998876667777777653
No 105
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.24 E-value=7.9e-12 Score=110.49 Aligned_cols=109 Identities=23% Similarity=0.335 Sum_probs=85.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||++.+.+...+.|+.. .++++++++||+|++++|.... ++.++. +
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-~~l~ell~~aDvV~l~~P~t~~-t~~li~--~ 220 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQ-VACSELFASSDFILLALPLNAD-TLHLVN--A 220 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEE-CCHHHHHHHCSEEEECCCCSTT-TTTCBC--H
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCcee-CCHHHHHhhCCEEEEcCCCCHH-HHHHhC--H
Confidence 47999999999999999999999999999999875555555556544 4899999999999999997544 455442 1
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
..++. +.++.++||++.+.+-..+.+.+.+...
T Consensus 221 ~~l~~--mk~gailIN~arg~~vd~~aL~~aL~~g 253 (330)
T 4e5n_A 221 ELLAL--VRPGALLVNPCRGSVVDEAAVLAALERG 253 (330)
T ss_dssp HHHTT--SCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred HHHhh--CCCCcEEEECCCCchhCHHHHHHHHHhC
Confidence 23332 4578899999999887778888887664
No 106
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.24 E-value=5.3e-12 Score=111.71 Aligned_cols=105 Identities=16% Similarity=0.224 Sum_probs=82.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||+++... |.....++++++++||+|++++|.... ++.++..
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~-----g~~~~~~l~ell~~aDvVil~vP~~~~-t~~li~~-- 235 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT-----NYTYYGSVVELASNSDILVVACPLTPE-TTHIINR-- 235 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC-----CSEEESCHHHHHHTCSEEEECSCCCGG-GTTCBCH--
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc-----CceecCCHHHHHhcCCEEEEecCCChH-HHHHhhH--
Confidence 47899999999999999999999999999999876532 555567899999999999999998654 5555521
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
..++. +.++.++||++++.+...+.+.+.+.+.
T Consensus 236 ~~l~~--mk~gailIn~srG~~vd~~aL~~aL~~g 268 (333)
T 3ba1_A 236 EVIDA--LGPKGVLINIGRGPHVDEPELVSALVEG 268 (333)
T ss_dssp HHHHH--HCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred HHHhc--CCCCCEEEECCCCchhCHHHHHHHHHcC
Confidence 12221 2366799999999887777888877653
No 107
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.24 E-value=1.3e-11 Score=110.66 Aligned_cols=110 Identities=18% Similarity=0.239 Sum_probs=88.0
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCe-EEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYK-MAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~-V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
.++|||||+|.||..+|+.+...|++ |++|||++...+...+.|+....++++++++||+|++++|.... ++.++..
T Consensus 164 g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~-t~~li~~- 241 (364)
T 2j6i_A 164 GKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAG-TKGLINK- 241 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTT-TTTCBCH-
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChH-HHHHhCH-
Confidence 47999999999999999999999997 99999988766666677776667899999999999999998654 5555421
Q ss_pred CCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 84 NGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
..++. +.++.++||++.+.+-..+.+.+.+...
T Consensus 242 -~~l~~--mk~ga~lIn~arG~~vd~~aL~~aL~~g 274 (364)
T 2j6i_A 242 -ELLSK--FKKGAWLVNTARGAICVAEDVAAALESG 274 (364)
T ss_dssp -HHHTT--SCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred -HHHhh--CCCCCEEEECCCCchhCHHHHHHHHHcC
Confidence 22322 4467899999999877777888887764
No 108
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.23 E-value=1.6e-11 Score=107.55 Aligned_cols=108 Identities=19% Similarity=0.244 Sum_probs=84.2
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||++++ +...+.|+.. .++++++++||+|++++|.... .+.++. +
T Consensus 142 g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~~l~ell~~aDvV~l~~p~~~~-t~~li~--~ 216 (307)
T 1wwk_A 142 GKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKF-VDLETLLKESDVVTIHVPLVES-TYHLIN--E 216 (307)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEE-CCHHHHHHHCSEEEECCCCSTT-TTTCBC--H
T ss_pred CceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCccc-cCHHHHHhhCCEEEEecCCChH-HhhhcC--H
Confidence 478999999999999999999999999999999877 4556667654 4789999999999999997654 455442 1
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
..++. +.++.++||++++.+-..+.+.+.+...
T Consensus 217 ~~l~~--mk~ga~lin~arg~~vd~~aL~~aL~~g 249 (307)
T 1wwk_A 217 ERLKL--MKKTAILINTSRGPVVDTNALVKALKEG 249 (307)
T ss_dssp HHHHH--SCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred HHHhc--CCCCeEEEECCCCcccCHHHHHHHHHhC
Confidence 12222 3467899999998876667777777653
No 109
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.22 E-value=1.6e-11 Score=107.99 Aligned_cols=108 Identities=12% Similarity=0.164 Sum_probs=84.4
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||++++. ...+.|+.. .+++++++++|+|++++|.... ++.++. +
T Consensus 142 g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~-~~l~ell~~aDvVvl~~P~~~~-t~~li~--~ 216 (313)
T 2ekl_A 142 GKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKINAKA-VSLEELLKNSDVISLHVTVSKD-AKPIID--Y 216 (313)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEE-CCHHHHHHHCSEEEECCCCCTT-SCCSBC--H
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh-HHHhcCcee-cCHHHHHhhCCEEEEeccCChH-HHHhhC--H
Confidence 4799999999999999999999999999999998764 355667664 4899999999999999997654 444432 1
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
..++. +.++.++||++++.+-..+.+.+.+...
T Consensus 217 ~~l~~--mk~ga~lIn~arg~~vd~~aL~~aL~~g 249 (313)
T 2ekl_A 217 PQFEL--MKDNVIIVNTSRAVAVNGKALLDYIKKG 249 (313)
T ss_dssp HHHHH--SCTTEEEEESSCGGGBCHHHHHHHHHTT
T ss_pred HHHhc--CCCCCEEEECCCCcccCHHHHHHHHHcC
Confidence 12221 3467899999998877777888877653
No 110
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.22 E-value=1.7e-11 Score=108.43 Aligned_cols=107 Identities=20% Similarity=0.181 Sum_probs=84.2
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||+++.... +.|+... ++++++++||+|++++|.... ++.++. +
T Consensus 141 g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~--~~g~~~~-~l~ell~~aDvV~l~~P~t~~-t~~li~--~ 214 (334)
T 2pi1_A 141 RLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK--EKGCVYT-SLDELLKESDVISLHVPYTKE-THHMIN--E 214 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH--HTTCEEC-CHHHHHHHCSEEEECCCCCTT-TTTCBC--H
T ss_pred CceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhH--hcCceec-CHHHHHhhCCEEEEeCCCChH-HHHhhC--H
Confidence 479999999999999999999999999999998876532 4566544 599999999999999997544 555442 1
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
..++. +.++.++||++.+.+-..+.+.+.+...
T Consensus 215 ~~l~~--mk~gailIN~aRg~~vd~~aL~~aL~~g 247 (334)
T 2pi1_A 215 ERISL--MKDGVYLINTARGKVVDTDALYRAYQRG 247 (334)
T ss_dssp HHHHH--SCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred HHHhh--CCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 23332 4578899999999987778888888653
No 111
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=99.22 E-value=1e-11 Score=109.17 Aligned_cols=108 Identities=13% Similarity=0.189 Sum_probs=83.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||+++..+.+ .+.....++++++++||+|++++|...+ ++.++..
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--~~~~~~~~l~ell~~aDvV~l~lPlt~~-T~~li~~-- 214 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGF--DQVYQLPALNKMLAQADVIVSVLPATRE-THHLFTA-- 214 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTC--SEEECGGGHHHHHHTCSEEEECCCCCSS-STTSBCT--
T ss_pred cceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhh--hcccccCCHHHHHhhCCEEEEeCCCCHH-HHHHhHH--
Confidence 4799999999999999999999999999999987433211 1122346889999999999999997654 5666532
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
..++. ++++.++||++.+.+-..+.+.+.+...
T Consensus 215 ~~l~~--mk~gailIN~aRG~~vde~aL~~aL~~g 247 (324)
T 3hg7_A 215 SRFEH--CKPGAILFNVGRGNAINEGDLLTALRTG 247 (324)
T ss_dssp TTTTC--SCTTCEEEECSCGGGBCHHHHHHHHHTT
T ss_pred HHHhc--CCCCcEEEECCCchhhCHHHHHHHHHcC
Confidence 33432 4578899999999987778888888764
No 112
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.21 E-value=1.2e-11 Score=109.72 Aligned_cols=106 Identities=20% Similarity=0.289 Sum_probs=82.2
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||++++ +...+.|+.. .++++++++||+|++|+|.... ++.++..
T Consensus 146 g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~~l~e~l~~aDiVil~vp~~~~-t~~~i~~-- 220 (333)
T 2d0i_A 146 GKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELKARY-MDIDELLEKSDIVILALPLTRD-TYHIINE-- 220 (333)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHTEEE-CCHHHHHHHCSEEEECCCCCTT-TTTSBCH--
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCcee-cCHHHHHhhCCEEEEcCCCChH-HHHHhCH--
Confidence 479999999999999999999999999999999876 4444556554 3788999999999999998744 5555531
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 118 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~ 118 (316)
..++. +.++ ++||++++.+...+.+.+.+.+
T Consensus 221 ~~~~~--mk~g-ilin~srg~~vd~~aL~~aL~~ 251 (333)
T 2d0i_A 221 ERVKK--LEGK-YLVNIGRGALVDEKAVTEAIKQ 251 (333)
T ss_dssp HHHHH--TBTC-EEEECSCGGGBCHHHHHHHHHT
T ss_pred HHHhh--CCCC-EEEECCCCcccCHHHHHHHHHc
Confidence 12221 3367 9999999887766777777765
No 113
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.21 E-value=1.8e-11 Score=106.96 Aligned_cols=105 Identities=12% Similarity=0.147 Sum_probs=82.5
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
..++|||||+|.||..+|+.+...|++|++|||+++ +. +.....++++++++||+|++++|.... ++.++.
T Consensus 123 ~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~--~~----~~~~~~~l~ell~~aDvV~l~~P~~~~-t~~~i~-- 193 (303)
T 1qp8_A 123 QGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK--EG----PWRFTNSLEEALREARAAVCALPLNKH-TRGLVK-- 193 (303)
T ss_dssp TTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC--CS----SSCCBSCSHHHHTTCSEEEECCCCSTT-TTTCBC--
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc--cc----CcccCCCHHHHHhhCCEEEEeCcCchH-HHHHhC--
Confidence 347999999999999999999999999999999876 21 445567889999999999999998754 565553
Q ss_pred CCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 84 NGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
+..++. +.++.++||++++.+-..+.+.+.+...
T Consensus 194 ~~~l~~--mk~gailin~srg~~vd~~aL~~aL~~g 227 (303)
T 1qp8_A 194 YQHLAL--MAEDAVFVNVGRAEVLDRDGVLRILKER 227 (303)
T ss_dssp HHHHTT--SCTTCEEEECSCGGGBCHHHHHHHHHHC
T ss_pred HHHHhh--CCCCCEEEECCCCcccCHHHHHHHHHhC
Confidence 123332 4467899999998876667787777653
No 114
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.18 E-value=1.2e-11 Score=108.96 Aligned_cols=108 Identities=13% Similarity=0.239 Sum_probs=82.9
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||+++..+.+.+ .....++++++++||+|++++|...+ ++.++. +
T Consensus 137 gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~--~~~~~~l~ell~~aDvV~l~lPlt~~-t~~li~--~ 211 (324)
T 3evt_A 137 GQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHE--TVAFTATADALATANFIVNALPLTPT-THHLFS--T 211 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCSE--EEEGGGCHHHHHHCSEEEECCCCCGG-GTTCBS--H
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhHhh--ccccCCHHHHHhhCCEEEEcCCCchH-HHHhcC--H
Confidence 479999999999999999999999999999998765432211 12245788999999999999997654 555542 2
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
+.++. +.++.++||++.+.+-..+.+.+.+...
T Consensus 212 ~~l~~--mk~gailIN~aRG~~vd~~aL~~aL~~g 244 (324)
T 3evt_A 212 ELFQQ--TKQQPMLINIGRGPAVDTTALMTALDHH 244 (324)
T ss_dssp HHHHT--CCSCCEEEECSCGGGBCHHHHHHHHHTT
T ss_pred HHHhc--CCCCCEEEEcCCChhhhHHHHHHHHHhC
Confidence 23332 4577899999999987778888888653
No 115
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.17 E-value=4.3e-11 Score=106.69 Aligned_cols=108 Identities=20% Similarity=0.223 Sum_probs=83.9
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||++. .+...+.|+.. .++++++++||+|++++|...+ ++.++. .
T Consensus 176 gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~-~~~~~~~g~~~-~~l~ell~~aDvV~l~~Plt~~-T~~li~--~ 250 (365)
T 4hy3_A 176 GSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLP-RSMLEENGVEP-ASLEDVLTKSDFIFVVAAVTSE-NKRFLG--A 250 (365)
T ss_dssp SSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSC-HHHHHHTTCEE-CCHHHHHHSCSEEEECSCSSCC----CCC--H
T ss_pred CCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCC-HHHHhhcCeee-CCHHHHHhcCCEEEEcCcCCHH-HHhhcC--H
Confidence 47999999999999999999999999999999853 34455567654 5899999999999999997655 555552 2
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
+.++. ++++.++||++.+.+-..+.+.+.+...
T Consensus 251 ~~l~~--mk~gailIN~aRG~~vde~aL~~aL~~g 283 (365)
T 4hy3_A 251 EAFSS--MRRGAAFILLSRADVVDFDALMAAVSSG 283 (365)
T ss_dssp HHHHT--SCTTCEEEECSCGGGSCHHHHHHHHHTT
T ss_pred HHHhc--CCCCcEEEECcCCchhCHHHHHHHHHcC
Confidence 23332 4577899999999987778888888764
No 116
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=99.15 E-value=8e-11 Score=104.34 Aligned_cols=107 Identities=15% Similarity=0.174 Sum_probs=83.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||++++. +.+ .+...+++++++++||+|++++|.... ++.++..
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~-~~~~~~~l~ell~~aDvV~l~~p~~~~-t~~li~~-- 219 (333)
T 1j4a_A 146 DQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--LEK-KGYYVDSLDDLYKQADVISLHVPDVPA-NVHMIND-- 219 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHH-TTCBCSCHHHHHHHCSEEEECSCCCGG-GTTCBSH--
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--HHh-hCeecCCHHHHHhhCCEEEEcCCCcHH-HHHHHhH--
Confidence 4789999999999999999999999999999988764 223 355555899999999999999997654 5554421
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
..++. +.++.++||++.+.+-..+.+.+.+...
T Consensus 220 ~~l~~--mk~ga~lIn~arg~~vd~~aL~~aL~~g 252 (333)
T 1j4a_A 220 ESIAK--MKQDVVIVNVSRGPLVDTDAVIRGLDSG 252 (333)
T ss_dssp HHHHH--SCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred HHHhh--CCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 12222 3467899999999877778888888764
No 117
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.15 E-value=6e-11 Score=111.63 Aligned_cols=107 Identities=14% Similarity=0.253 Sum_probs=84.3
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.|...|++|++|||+++. +...+.|+..+ ++++++++||+|++|+|.... ++.++..
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~~-~l~e~~~~aDvV~l~~P~~~~-t~~~i~~-- 216 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSP-ARAAQLGIELL-SLDDLLARADFISVHLPKTPE-TAGLIDK-- 216 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCH-HHHHHHTCEEC-CHHHHHHHCSEEEECCCCSTT-TTTCBCH--
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHHhcCcEEc-CHHHHHhcCCEEEECCCCchH-HHHHhCH--
Confidence 479999999999999999999999999999998753 34555676654 899999999999999998744 5666542
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 118 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~ 118 (316)
..++. +.++.++||++++.+-....+.+.+..
T Consensus 217 ~~~~~--~k~g~ilin~arg~iv~~~aL~~al~~ 248 (529)
T 1ygy_A 217 EALAK--TKPGVIIVNAARGGLVDEAALADAITG 248 (529)
T ss_dssp HHHTT--SCTTEEEEECSCTTSBCHHHHHHHHHT
T ss_pred HHHhC--CCCCCEEEECCCCchhhHHHHHHHHHc
Confidence 12322 346789999999887777777777765
No 118
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=99.15 E-value=1.2e-11 Score=108.40 Aligned_cols=108 Identities=18% Similarity=0.267 Sum_probs=81.9
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||+++..+.+... ....++++++++||+|++++|.... ++.++. +
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~--~~~~~l~ell~~aDiV~l~~Plt~~-t~~li~--~ 213 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESY--VGREELRAFLNQTRVLINLLPNTAQ-TVGIIN--S 213 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEE--ESHHHHHHHHHTCSEEEECCCCCGG-GTTCBS--H
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhh--cccCCHHHHHhhCCEEEEecCCchh-hhhhcc--H
Confidence 5799999999999999999999999999999987643211110 1125788999999999999997654 555552 1
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
..++. ++++.++||++.+..-..+.+.+.+...
T Consensus 214 ~~l~~--mk~gailIN~aRG~~vd~~aL~~aL~~g 246 (315)
T 3pp8_A 214 ELLDQ--LPDGAYVLNLARGVHVQEADLLAALDSG 246 (315)
T ss_dssp HHHTT--SCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred HHHhh--CCCCCEEEECCCChhhhHHHHHHHHHhC
Confidence 23332 4578899999999887778888888653
No 119
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=99.14 E-value=4.7e-11 Score=105.72 Aligned_cols=106 Identities=19% Similarity=0.208 Sum_probs=82.1
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||+++.. .+.+.. ..++++++++||+|++++|.... ++.++. .
T Consensus 148 gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---~~~~~~-~~~l~ell~~aDvV~l~~Plt~~-t~~li~--~ 220 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE---FEPFLT-YTDFDTVLKEADIVSLHTPLFPS-TENMIG--E 220 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG---GTTTCE-ECCHHHHHHHCSEEEECCCCCTT-TTTCBC--H
T ss_pred CCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh---hhcccc-ccCHHHHHhcCCEEEEcCCCCHH-HHHHhh--H
Confidence 4789999999999999999999999999999987641 222333 34899999999999999997544 555442 1
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
..++. ++++.++||++.+.+-..+.+.+.+...
T Consensus 221 ~~l~~--mk~gailIN~aRg~~vd~~aL~~aL~~g 253 (343)
T 2yq5_A 221 KQLKE--MKKSAYLINCARGELVDTGALIKALQDG 253 (343)
T ss_dssp HHHHH--SCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred HHHhh--CCCCcEEEECCCChhhhHHHHHHHHHcC
Confidence 23332 4577899999999987778888888653
No 120
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.12 E-value=6.9e-11 Score=103.72 Aligned_cols=101 Identities=17% Similarity=0.244 Sum_probs=79.2
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||++++.. + ...++++++++||+|++++|.... .+.++..
T Consensus 144 g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~------~-~~~~l~ell~~aDvV~l~~p~~~~-t~~li~~-- 213 (311)
T 2cuk_A 144 GLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP------Y-PFLSLEELLKEADVVSLHTPLTPE-THRLLNR-- 213 (311)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS------S-CBCCHHHHHHHCSEEEECCCCCTT-TTTCBCH--
T ss_pred CCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc------c-ccCCHHHHHhhCCEEEEeCCCChH-HHhhcCH--
Confidence 47899999999999999999999999999999876543 2 246889999999999999998754 5555431
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHh
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVS 117 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~ 117 (316)
..++. +.++.++||++++.+-..+.+.+.+.
T Consensus 214 ~~l~~--mk~ga~lin~srg~~vd~~aL~~aL~ 244 (311)
T 2cuk_A 214 ERLFA--MKRGAILLNTARGALVDTEALVEALR 244 (311)
T ss_dssp HHHTT--SCTTCEEEECSCGGGBCHHHHHHHHT
T ss_pred HHHhh--CCCCcEEEECCCCCccCHHHHHHHHh
Confidence 22322 34678999999988766677777776
No 121
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.11 E-value=6.3e-11 Score=107.40 Aligned_cols=106 Identities=16% Similarity=0.179 Sum_probs=83.2
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||++... ..++....++++++++||+|++++|...+ ++.++. +
T Consensus 145 gktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~~~~~~~~l~ell~~aDvV~l~~P~t~~-t~~li~--~ 217 (404)
T 1sc6_A 145 GKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP----LGNATQVQHLSDLLNMSDVVSLHVPENPS-TKNMMG--A 217 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC----CTTCEECSCHHHHHHHCSEEEECCCSSTT-TTTCBC--H
T ss_pred CCEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc----cCCceecCCHHHHHhcCCEEEEccCCChH-HHHHhh--H
Confidence 4799999999999999999999999999999976531 12345567899999999999999998755 566553 1
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
+.++. ++++.++||++++.+-..+.+.+.+...
T Consensus 218 ~~l~~--mk~ga~lIN~aRg~~vd~~aL~~aL~~g 250 (404)
T 1sc6_A 218 KEISL--MKPGSLLINASRGTVVDIPALADALASK 250 (404)
T ss_dssp HHHHH--SCTTEEEEECSCSSSBCHHHHHHHHHTT
T ss_pred HHHhh--cCCCeEEEECCCChHHhHHHHHHHHHcC
Confidence 23332 4578899999999877777888877653
No 122
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=99.08 E-value=9.7e-11 Score=105.85 Aligned_cols=106 Identities=18% Similarity=0.242 Sum_probs=80.1
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++||+++... ..+.....++++++++||+|++++|...+ .+.++. +
T Consensus 156 gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~----~~~~~~~~sl~ell~~aDvV~lhvPlt~~-T~~li~--~ 228 (416)
T 3k5p_A 156 GKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQ----YGNVKPAASLDELLKTSDVVSLHVPSSKS-TSKLIT--E 228 (416)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCC----BTTBEECSSHHHHHHHCSEEEECCCC------CCBC--H
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhc----ccCcEecCCHHHHHhhCCEEEEeCCCCHH-HhhhcC--H
Confidence 4789999999999999999999999999999975421 12344567899999999999999998654 555542 1
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
+.++. ++++.++||++.+.+-..+.+.+.+...
T Consensus 229 ~~l~~--mk~gailIN~aRG~vvd~~aL~~aL~~g 261 (416)
T 3k5p_A 229 AKLRK--MKKGAFLINNARGSDVDLEALAKVLQEG 261 (416)
T ss_dssp HHHHH--SCTTEEEEECSCTTSBCHHHHHHHHHTT
T ss_pred HHHhh--CCCCcEEEECCCChhhhHHHHHHHHHcC
Confidence 23332 4578899999999987778888888653
No 123
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=99.05 E-value=1.7e-10 Score=102.23 Aligned_cols=106 Identities=14% Similarity=0.123 Sum_probs=81.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||++++. + +..+. ..++++++++||+|++++|...+ ++.++. +
T Consensus 145 g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~~~-~~~l~ell~~aDvV~~~~P~~~~-t~~li~--~ 217 (333)
T 1dxy_A 145 QQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D-HPDFD-YVSLEDLFKQSDVIDLHVPGIEQ-NTHIIN--E 217 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C-CTTCE-ECCHHHHHHHCSEEEECCCCCGG-GTTSBC--H
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h-Hhccc-cCCHHHHHhcCCEEEEcCCCchh-HHHHhC--H
Confidence 4789999999999999999999999999999987643 1 22222 34889999999999999998765 555442 1
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
..++. +.++.++||++++.+-..+.+.+.+...
T Consensus 218 ~~l~~--mk~ga~lIn~srg~~vd~~aL~~aL~~g 250 (333)
T 1dxy_A 218 AAFNL--MKPGAIVINTARPNLIDTQAMLSNLKSG 250 (333)
T ss_dssp HHHHH--SCTTEEEEECSCTTSBCHHHHHHHHHTT
T ss_pred HHHhh--CCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 22322 4467899999999877778888888763
No 124
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=99.02 E-value=2.3e-10 Score=101.26 Aligned_cols=106 Identities=21% Similarity=0.183 Sum_probs=81.1
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.++|||||+|.||..+|+.+...|++|++|||++++. + +..+ ...++++++++||+|++++|.... .+.++. +
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~~-~~~~l~ell~~aDvV~~~~p~t~~-t~~li~--~ 218 (331)
T 1xdw_A 146 NCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I-EDYC-TQVSLDEVLEKSDIITIHAPYIKE-NGAVVT--R 218 (331)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C-TTTC-EECCHHHHHHHCSEEEECCCCCTT-TCCSBC--H
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H-Hhcc-ccCCHHHHHhhCCEEEEecCCchH-HHHHhC--H
Confidence 4789999999999999999999999999999987643 1 2222 235889999999999999997644 444442 1
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
..++. +.++.++||++.+.+-..+.+.+.+...
T Consensus 219 ~~l~~--mk~ga~lin~srg~~vd~~aL~~aL~~g 251 (331)
T 1xdw_A 219 DFLKK--MKDGAILVNCARGQLVDTEAVIEAVESG 251 (331)
T ss_dssp HHHHT--SCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred HHHhh--CCCCcEEEECCCcccccHHHHHHHHHhC
Confidence 22322 4467899999999877778888888764
No 125
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=99.01 E-value=4e-10 Score=99.44 Aligned_cols=66 Identities=20% Similarity=0.195 Sum_probs=52.9
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHH----h------CC--CCCcCCHHHHhhcCCEEEEeCC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFS----D------MG--VPTKETPFEVAEASDVVITMLP 70 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~----~------~g--~~~~~~~~~~~~~adivi~~vp 70 (316)
+.|||+|||+|.||++++..|+.+|+ +|++||+++++++... . .. +..+++. +++++||+||+|++
T Consensus 3 ~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg 81 (317)
T 2ewd_A 3 ERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITAS 81 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence 45899999999999999999999998 9999999988765531 1 12 2333566 77899999999983
No 126
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=99.01 E-value=2.4e-10 Score=88.00 Aligned_cols=110 Identities=13% Similarity=0.167 Sum_probs=77.9
Q ss_pred CCCCeEEEEcc----chhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHH
Q 021213 3 FFDQSVGFIGL----GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLD 78 (316)
Q Consensus 3 ~~~~~IgiiG~----G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~ 78 (316)
+...+|+|||+ |.||..++++|.+.||+|+.+|++.+.+ .|.....|+.|+.+.+|++++|+|. .. +.+
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----~G~~~~~s~~el~~~vDlvii~vp~-~~-v~~ 84 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----EGLKCYRSVRELPKDVDVIVFVVPP-KV-GLQ 84 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----TTEECBSSGGGSCTTCCEEEECSCH-HH-HHH
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----CCeeecCCHHHhCCCCCEEEEEeCH-HH-HHH
Confidence 44679999999 9999999999999999977777654332 5778888999998899999999995 33 777
Q ss_pred HhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCccEEeccCC
Q 021213 79 VYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVS 139 (316)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~~ 139 (316)
++.+. .+ ...+.+++++++.. +++.+...+.+ ..+++..+.
T Consensus 85 v~~~~---~~---~g~~~i~~~~~~~~----~~l~~~a~~~G----------i~~igpnc~ 125 (138)
T 1y81_A 85 VAKEA---VE---AGFKKLWFQPGAES----EEIRRFLEKAG----------VEYSFGRCI 125 (138)
T ss_dssp HHHHH---HH---TTCCEEEECTTSCC----HHHHHHHHHHT----------CEEECSCCH
T ss_pred HHHHH---HH---cCCCEEEEcCccHH----HHHHHHHHHCC----------CEEEcCCcc
Confidence 77543 22 11235777776643 45555555433 567764443
No 127
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.00 E-value=8.4e-10 Score=96.59 Aligned_cols=93 Identities=19% Similarity=0.299 Sum_probs=72.6
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCC--cCCHHHHhhcCCEEEEeCCCChhhHHHHhcC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPT--KETPFEVAEASDVVITMLPSSSHQVLDVYNG 82 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~--~~~~~~~~~~adivi~~vp~~~~~~~~v~~~ 82 (316)
.++|+|||+|.||..+++.+...|++|++|||++++.+.+.+.|... ..+.+++++++|+|++++|...- -++.+..
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i-~~~~~~~ 235 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPSMIL-NQTVLSS 235 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSSCCB-CHHHHTT
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCChhhh-CHHHHHh
Confidence 57999999999999999999999999999999998877776666543 25788889999999999997531 1222221
Q ss_pred CCCcccCCCCCCCeEEEEcCCCCHH
Q 021213 83 PNGLLQGGNSVRPQLLIDSSTIDPQ 107 (316)
Q Consensus 83 ~~~~~~~~~~~~~~~vi~~st~~~~ 107 (316)
+.++.++||++.....
T Consensus 236 ---------mk~g~~lin~a~g~~~ 251 (300)
T 2rir_A 236 ---------MTPKTLILDLASRPGG 251 (300)
T ss_dssp ---------SCTTCEEEECSSTTCS
T ss_pred ---------CCCCCEEEEEeCCCCC
Confidence 2356799999986433
No 128
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=99.00 E-value=6.8e-10 Score=99.19 Aligned_cols=106 Identities=19% Similarity=0.264 Sum_probs=78.9
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChh---hHHHHhc
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSH---QVLDVYN 81 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~---~~~~v~~ 81 (316)
.++|||||+|.||..+|+.+...|++|++|||+.+.. + ......++++++++||+|++++|...+ .++.++.
T Consensus 119 gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~----~-~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~ 193 (381)
T 3oet_A 119 DRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAAR----G-DEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLAD 193 (381)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHT----T-CCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBC
T ss_pred CCEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHHh----c-cCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcC
Confidence 4789999999999999999999999999999854322 1 233467899999999999999985421 0122221
Q ss_pred CCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 82 GPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
.+.++. ++++.++||++.+.+-..+.+.+.+...
T Consensus 194 --~~~l~~--mk~gailIN~aRG~vvde~aL~~aL~~g 227 (381)
T 3oet_A 194 --ETLIRR--LKPGAILINACRGPVVDNAALLARLNAG 227 (381)
T ss_dssp --HHHHHH--SCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred --HHHHhc--CCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 122322 4578899999999987778888888664
No 129
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.97 E-value=1.5e-09 Score=97.27 Aligned_cols=106 Identities=15% Similarity=0.178 Sum_probs=78.7
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChh---hHHHHhc
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSH---QVLDVYN 81 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~---~~~~v~~ 81 (316)
.++|||||+|+||..+|+.|...|++|++||++++.. +.+. ...++++++++||+|++++|.... .++.++.
T Consensus 116 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~g~-~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~ 190 (380)
T 2o4c_A 116 ERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR----EPDG-EFVSLERLLAEADVISLHTPLNRDGEHPTRHLLD 190 (380)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH----STTS-CCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh----ccCc-ccCCHHHHHHhCCEEEEeccCccccccchhhhcC
Confidence 4799999999999999999999999999999866432 2343 346899999999999999986431 0122221
Q ss_pred CCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 82 GPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
+..++. +.++.++||++++.+-..+.+.+.+...
T Consensus 191 --~~~l~~--mk~gailIN~sRG~vvd~~aL~~aL~~g 224 (380)
T 2o4c_A 191 --EPRLAA--LRPGTWLVNASRGAVVDNQALRRLLEGG 224 (380)
T ss_dssp --HHHHHT--SCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred --HHHHhh--CCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 122322 4467899999999877778888877653
No 130
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.97 E-value=1.1e-09 Score=94.48 Aligned_cols=92 Identities=15% Similarity=0.165 Sum_probs=71.1
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC-CCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-GVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~-g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
.++|+|||+|.||.+++..|.+.|++|++|||++++.+.+.+. |+...++..++++++|+||.|+|.+.. ..+...+
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~--~~~~~~i 206 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLK--DEDPEIF 206 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSS--TTCCCSS
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCC--CCCCCCC
Confidence 4789999999999999999999999999999999988887653 555555788888999999999997642 2111111
Q ss_pred C-CcccCCCCCCCeEEEEcCC
Q 021213 84 N-GLLQGGNSVRPQLLIDSST 103 (316)
Q Consensus 84 ~-~~~~~~~~~~~~~vi~~st 103 (316)
. .. ..++.+++|++.
T Consensus 207 ~~~~-----l~~g~~viDv~~ 222 (275)
T 2hk9_A 207 NYDL-----IKKDHVVVDIIY 222 (275)
T ss_dssp CGGG-----CCTTSEEEESSS
T ss_pred CHHH-----cCCCCEEEEcCC
Confidence 1 11 235679999988
No 131
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.97 E-value=1.1e-09 Score=85.01 Aligned_cols=69 Identities=19% Similarity=0.278 Sum_probs=59.4
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh-CCCC--CcCCHHHHhhcCCEEEEeCCCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-MGVP--TKETPFEVAEASDVVITMLPSSS 73 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~-~g~~--~~~~~~~~~~~adivi~~vp~~~ 73 (316)
.++|+|||+|.||..++..|.+.|++|++|+|++++.+.+.+ .+.. ...+..++++++|+||.|+|.+.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~~ 92 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSKT 92 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCCC
Confidence 479999999999999999999999999999999999887654 3433 45688888999999999999763
No 132
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.96 E-value=1.7e-09 Score=80.65 Aligned_cols=104 Identities=19% Similarity=0.250 Sum_probs=72.8
Q ss_pred CCCCeEEEEccchhhHHHHHHHHhCC-CeEEEEeCChhHHHHHHhCCCCC-------cCCHHHHhhcCCEEEEeCCCChh
Q 021213 3 FFDQSVGFIGLGNMGFRMASNLMKAG-YKMAVHDVNCNVMKMFSDMGVPT-------KETPFEVAEASDVVITMLPSSSH 74 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~~la~~l~~~g-~~V~~~~r~~~~~~~l~~~g~~~-------~~~~~~~~~~adivi~~vp~~~~ 74 (316)
.++++|.|+|+|.||..++..|.+.| ++|++++|++++.+.+.+.++.. ..+..++++++|+||.|+|...
T Consensus 3 ~~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~- 81 (118)
T 3ic5_A 3 AMRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFL- 81 (118)
T ss_dssp TTCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGG-
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchh-
Confidence 34579999999999999999999999 99999999999988887555321 1234456778999999998654
Q ss_pred hHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHh
Q 021213 75 QVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVS 117 (316)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~ 117 (316)
...++... .+ .+..+++.++ .+...+.+.+...
T Consensus 82 -~~~~~~~~---~~-----~g~~~~~~~~-~~~~~~~~~~~~~ 114 (118)
T 3ic5_A 82 -TPIIAKAA---KA-----AGAHYFDLTE-DVAATNAVRALVE 114 (118)
T ss_dssp -HHHHHHHH---HH-----TTCEEECCCS-CHHHHHHHHHHHH
T ss_pred -hHHHHHHH---HH-----hCCCEEEecC-cHHHHHHHHHHHH
Confidence 24443321 11 3345667665 4445566655443
No 133
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.96 E-value=3.6e-09 Score=93.81 Aligned_cols=110 Identities=10% Similarity=0.129 Sum_probs=80.4
Q ss_pred CCCCCCeEEEEccchhhHHHHHHHHhC-CCeEE-EEeCChhHHHHHHh-CCC-CCcCCHHHHhh--cCCEEEEeCCCChh
Q 021213 1 MLFFDQSVGFIGLGNMGFRMASNLMKA-GYKMA-VHDVNCNVMKMFSD-MGV-PTKETPFEVAE--ASDVVITMLPSSSH 74 (316)
Q Consensus 1 ~~~~~~~IgiiG~G~mG~~la~~l~~~-g~~V~-~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~adivi~~vp~~~~ 74 (316)
|.|+++||||||+|.||..++..|.+. +++|. ++|+++++.+.+.+ .|+ ...+|.+++++ ++|+|++|+|+..+
T Consensus 1 M~m~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 80 (330)
T 3e9m_A 1 MSLDKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGH 80 (330)
T ss_dssp --CCCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGH
T ss_pred CCCCeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHH
Confidence 666678999999999999999999985 56765 78999999887765 466 57889999987 79999999999876
Q ss_pred hHHHHhcCCCCcccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHhhc
Q 021213 75 QVLDVYNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVSNC 119 (316)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~vi~~s-t~~~~~~~~l~~~~~~~ 119 (316)
.+-+.. .++. +..+++..- +..+...+++.+...+.
T Consensus 81 -~~~~~~----al~~----gk~vl~EKP~~~~~~e~~~l~~~a~~~ 117 (330)
T 3e9m_A 81 -YSAAKL----ALSQ----GKPVLLEKPFTLNAAEAEELFAIAQEQ 117 (330)
T ss_dssp -HHHHHH----HHHT----TCCEEECSSCCSSHHHHHHHHHHHHHT
T ss_pred -HHHHHH----HHHC----CCeEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 443332 2221 223555543 55677778887776654
No 134
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.95 E-value=3.5e-09 Score=92.96 Aligned_cols=109 Identities=13% Similarity=0.146 Sum_probs=80.2
Q ss_pred CCCCeEEEEccchhhHH-HHHHHHh-CCCeEE-EEeCChhHHHHHHh-CCCCCcCCHHHHhhcCCEEEEeCCCChhhHHH
Q 021213 3 FFDQSVGFIGLGNMGFR-MASNLMK-AGYKMA-VHDVNCNVMKMFSD-MGVPTKETPFEVAEASDVVITMLPSSSHQVLD 78 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~~-la~~l~~-~g~~V~-~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~ 78 (316)
|+++||||||+|.||.. ++..|.+ .+.++. ++|+++++.+.+.+ .|+...++.+++++++|+|++|+|+..+ .+-
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h-~~~ 82 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETH-YEI 82 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGH-HHH
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhH-HHH
Confidence 44589999999999996 8888887 456766 79999999888765 4777788999999999999999999876 333
Q ss_pred HhcCCCCcccCCCCCCCeEEEE-cCCCCHHHHHHHHHHHhhch
Q 021213 79 VYNGPNGLLQGGNSVRPQLLID-SSTIDPQTSRNISAAVSNCI 120 (316)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~vi~-~st~~~~~~~~l~~~~~~~~ 120 (316)
+.. .++. +..+++. -.+..+...+++.+...+.+
T Consensus 83 ~~~----al~~----gk~vl~EKP~~~~~~~~~~l~~~a~~~g 117 (308)
T 3uuw_A 83 IKI----LLNL----GVHVYVDKPLASTVSQGEELIELSTKKN 117 (308)
T ss_dssp HHH----HHHT----TCEEEECSSSSSSHHHHHHHHHHHHHHT
T ss_pred HHH----HHHC----CCcEEEcCCCCCCHHHHHHHHHHHHHcC
Confidence 332 2221 2235554 35556777888887776643
No 135
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.95 E-value=5.4e-09 Score=93.62 Aligned_cols=108 Identities=16% Similarity=0.267 Sum_probs=80.9
Q ss_pred CCCCeEEEEccchhhHHHHHHHHhC-CCeEE-EEeCChhHHHHHHh-CCCCCcCCHHHHh--hcCCEEEEeCCCChhhHH
Q 021213 3 FFDQSVGFIGLGNMGFRMASNLMKA-GYKMA-VHDVNCNVMKMFSD-MGVPTKETPFEVA--EASDVVITMLPSSSHQVL 77 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~~la~~l~~~-g~~V~-~~~r~~~~~~~l~~-~g~~~~~~~~~~~--~~adivi~~vp~~~~~~~ 77 (316)
++++||||||+|.||..++..|.+. +++|. ++|+++++.+.+.+ .|+...++.++++ .++|+|++|+|+..+ .+
T Consensus 3 ~~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h-~~ 81 (354)
T 3db2_A 3 YNPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKH-AE 81 (354)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSH-HH
T ss_pred CCcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHH-HH
Confidence 3457999999999999999999887 67754 88999999887765 4788889999999 469999999999876 44
Q ss_pred HHhcCCCCcccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHhhc
Q 021213 78 DVYNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVSNC 119 (316)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~vi~~s-t~~~~~~~~l~~~~~~~ 119 (316)
-+.. .++. +..+++..- +..+...+++.+...+.
T Consensus 82 ~~~~----al~~----gk~vl~EKP~~~~~~~~~~l~~~a~~~ 116 (354)
T 3db2_A 82 VIEQ----CARS----GKHIYVEKPISVSLDHAQRIDQVIKET 116 (354)
T ss_dssp HHHH----HHHT----TCEEEEESSSCSSHHHHHHHHHHHHHH
T ss_pred HHHH----HHHc----CCEEEEccCCCCCHHHHHHHHHHHHHc
Confidence 4332 2221 234555543 55677788887776654
No 136
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.94 E-value=3.3e-09 Score=93.15 Aligned_cols=67 Identities=27% Similarity=0.284 Sum_probs=54.9
Q ss_pred CeEEEEccchhhHHHHHHHHhCC--CeEEEEeCChhHHHHHHhC----------CCCC-cCCHHHHhhcCCEEEEeCCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAG--YKMAVHDVNCNVMKMFSDM----------GVPT-KETPFEVAEASDVVITMLPSS 72 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g--~~V~~~~r~~~~~~~l~~~----------g~~~-~~~~~~~~~~adivi~~vp~~ 72 (316)
|||+|||+|.||++++..|+++| ++|++|||++++++.+... .... .++. +.+++||+||+|+|.+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGNI 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCCc
Confidence 69999999999999999999999 8999999999887665421 1233 3566 7788999999999875
Q ss_pred h
Q 021213 73 S 73 (316)
Q Consensus 73 ~ 73 (316)
.
T Consensus 81 ~ 81 (309)
T 1hyh_A 81 K 81 (309)
T ss_dssp G
T ss_pred c
Confidence 4
No 137
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.92 E-value=8.2e-09 Score=92.58 Aligned_cols=110 Identities=17% Similarity=0.190 Sum_probs=80.8
Q ss_pred CCCCCCeEEEEccchhhHHHHHHHHhC-CCeEE-EEeCChhHHHHHHhCCCCCcCCHHHHhh--cCCEEEEeCCCChhhH
Q 021213 1 MLFFDQSVGFIGLGNMGFRMASNLMKA-GYKMA-VHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITMLPSSSHQV 76 (316)
Q Consensus 1 ~~~~~~~IgiiG~G~mG~~la~~l~~~-g~~V~-~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~adivi~~vp~~~~~~ 76 (316)
|+|.++||||||+|.||...+..|.+. +.+|. ++|+++++.+...+.|+...+|.+++++ +.|+|++|+|+..+ .
T Consensus 1 M~m~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h-~ 79 (359)
T 3e18_A 1 MSLKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSH-K 79 (359)
T ss_dssp --CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGGH-H
T ss_pred CCCCcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHHH-H
Confidence 666668999999999999999999876 56765 7899999887666778888899999987 78999999999876 4
Q ss_pred HHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 77 LDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
+-+.. .++. +..+++.. .+..+...+++.+...+.
T Consensus 80 ~~~~~----al~a----GkhVl~EKP~a~~~~ea~~l~~~a~~~ 115 (359)
T 3e18_A 80 ELAIS----ALEA----GKHVVCEKPVTMTSEDLLAIMDVAKRV 115 (359)
T ss_dssp HHHHH----HHHT----TCEEEEESSCCSSHHHHHHHHHHHHHH
T ss_pred HHHHH----HHHC----CCCEEeeCCCcCCHHHHHHHHHHHHHh
Confidence 43332 2221 23455553 345577777777766654
No 138
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.91 E-value=4.6e-09 Score=90.09 Aligned_cols=101 Identities=12% Similarity=0.051 Sum_probs=72.4
Q ss_pred eEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC-CCCCcCCHHHHhhcCCEEEEeCCCChh-hHHHHhcCCC
Q 021213 7 SVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-GVPTKETPFEVAEASDVVITMLPSSSH-QVLDVYNGPN 84 (316)
Q Consensus 7 ~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~-g~~~~~~~~~~~~~adivi~~vp~~~~-~~~~v~~~~~ 84 (316)
+|+|||+|.||.+++..|.+.|++|++|||++++.+.+.+. +.. .++..++ +++|+||+|+|.+.. .+...+. .
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-~~~~~~~-~~~Divi~~tp~~~~~~~~~~l~--~ 193 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR-AVPLEKA-REARLLVNATRVGLEDPSASPLP--A 193 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-ECCGGGG-GGCSEEEECSSTTTTCTTCCSSC--G
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-hhhHhhc-cCCCEEEEccCCCCCCCCCCCCC--H
Confidence 89999999999999999999999999999999888777653 444 4577788 899999999997642 0111121 1
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 118 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~ 118 (316)
.. ..++++++|++.....+ .+.+...+
T Consensus 194 ~~-----l~~g~~viD~~~~p~~t--~l~~~a~~ 220 (263)
T 2d5c_A 194 EL-----FPEEGAAVDLVYRPLWT--RFLREAKA 220 (263)
T ss_dssp GG-----SCSSSEEEESCCSSSSC--HHHHHHHH
T ss_pred HH-----cCCCCEEEEeecCCccc--HHHHHHHH
Confidence 12 23567899998874333 34444443
No 139
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.90 E-value=7.5e-09 Score=91.29 Aligned_cols=110 Identities=15% Similarity=0.219 Sum_probs=76.9
Q ss_pred CCCCCCeEEEEccchhhHH-HHHHHHhC-CCeEE-EEeCChhHHHHHHh-CCCCCcCCHHHHhhcCCEEEEeCCCChhhH
Q 021213 1 MLFFDQSVGFIGLGNMGFR-MASNLMKA-GYKMA-VHDVNCNVMKMFSD-MGVPTKETPFEVAEASDVVITMLPSSSHQV 76 (316)
Q Consensus 1 ~~~~~~~IgiiG~G~mG~~-la~~l~~~-g~~V~-~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~adivi~~vp~~~~~~ 76 (316)
|+|.++||||||+|.||.. ++..|.+. ++++. ++|+++++.+.+.+ .|+...++.+++..++|+|++|+|+..+ .
T Consensus 1 m~m~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h-~ 79 (319)
T 1tlt_A 1 MSLKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASH-F 79 (319)
T ss_dssp ----CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHH-H
T ss_pred CCCCcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhH-H
Confidence 6666689999999999996 88888764 67765 89999998877765 3777777887776789999999998775 3
Q ss_pred HHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 77 LDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
+-+.. .++. +..++++. .+..+...+++.+...+.
T Consensus 80 ~~~~~----al~~----G~~v~~eKP~~~~~~~~~~l~~~a~~~ 115 (319)
T 1tlt_A 80 DVVST----LLNA----GVHVCVDKPLAENLRDAERLVELAARK 115 (319)
T ss_dssp HHHHH----HHHT----TCEEEEESSSCSSHHHHHHHHHHHHHT
T ss_pred HHHHH----HHHc----CCeEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 33332 2221 22466663 455677777887776654
No 140
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.90 E-value=8.9e-09 Score=91.81 Aligned_cols=107 Identities=17% Similarity=0.250 Sum_probs=80.7
Q ss_pred CCeEEEEccchhhHHHHHHHHhC-CCeEE-EEeCChhHHHHHHh-CCCCCcCCHHHHhh--cCCEEEEeCCCChhhHHHH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKA-GYKMA-VHDVNCNVMKMFSD-MGVPTKETPFEVAE--ASDVVITMLPSSSHQVLDV 79 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~-g~~V~-~~~r~~~~~~~l~~-~g~~~~~~~~~~~~--~adivi~~vp~~~~~~~~v 79 (316)
++||||||+|.||..++..|.+. +++|+ ++|+++++++.+.+ .|....++.+++++ ++|+|++|+|+..+ .+-+
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h-~~~~ 82 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTH-VDLI 82 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGH-HHHH
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhh-HHHH
Confidence 47999999999999999999986 57766 79999999888765 47777889999998 89999999999876 4433
Q ss_pred hcCCCCcccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHhhch
Q 021213 80 YNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVSNCI 120 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~vi~~s-t~~~~~~~~l~~~~~~~~ 120 (316)
.. .++. +..+++..- +..+...+++.+...+.+
T Consensus 83 ~~----al~~----gk~v~~EKP~~~~~~~~~~l~~~a~~~g 116 (344)
T 3euw_A 83 TR----AVER----GIPALCEKPIDLDIEMVRACKEKIGDGA 116 (344)
T ss_dssp HH----HHHT----TCCEEECSCSCSCHHHHHHHHHHHGGGG
T ss_pred HH----HHHc----CCcEEEECCCCCCHHHHHHHHHHHHhcC
Confidence 32 2221 223555543 556777888887776644
No 141
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.88 E-value=6.5e-09 Score=90.55 Aligned_cols=92 Identities=20% Similarity=0.322 Sum_probs=71.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCc--CCHHHHhhcCCEEEEeCCCChhhHHHHhcC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTK--ETPFEVAEASDVVITMLPSSSHQVLDVYNG 82 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~--~~~~~~~~~adivi~~vp~~~~~~~~v~~~ 82 (316)
.++|+|||+|.||..+++.+...|.+|++|||++++.+.+.+.|+... .+.+++++++|+|++++|.... -++.+..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i-~~~~l~~ 233 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPALVV-TANVLAE 233 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSSCCB-CHHHHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCChHHh-CHHHHHh
Confidence 478999999999999999999999999999999988776666676542 4678888999999999997531 1222221
Q ss_pred CCCcccCCCCCCCeEEEEcCCCCH
Q 021213 83 PNGLLQGGNSVRPQLLIDSSTIDP 106 (316)
Q Consensus 83 ~~~~~~~~~~~~~~~vi~~st~~~ 106 (316)
..++.++||++....
T Consensus 234 ---------mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 234 ---------MPSHTFVIDLASKPG 248 (293)
T ss_dssp ---------SCTTCEEEECSSTTC
T ss_pred ---------cCCCCEEEEecCCCC
Confidence 235679999987543
No 142
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.87 E-value=1e-08 Score=90.92 Aligned_cols=106 Identities=16% Similarity=0.239 Sum_probs=79.2
Q ss_pred CCCeEEEEccchhhHHHHHHHHhC-CCeEE-EEeCChhHHHHHHh-CCCCCcCCHHHHhh--cCCEEEEeCCCChhhHHH
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKA-GYKMA-VHDVNCNVMKMFSD-MGVPTKETPFEVAE--ASDVVITMLPSSSHQVLD 78 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~-g~~V~-~~~r~~~~~~~l~~-~g~~~~~~~~~~~~--~adivi~~vp~~~~~~~~ 78 (316)
|++||||||+|.||..++..|.+. ++++. ++|+++++.+.+.+ .|+. .++.+++++ ++|+|++|+|+..+ .+-
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h-~~~ 79 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDTH-ADL 79 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGGH-HHH
T ss_pred CceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchhH-HHH
Confidence 357999999999999999999985 67766 79999999887765 5777 889999998 79999999998876 443
Q ss_pred HhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 79 VYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
+.. .++. +..+++.. .+..+...+++.+...+.
T Consensus 80 ~~~----al~~----gk~v~~EKP~~~~~~~~~~l~~~a~~~ 113 (331)
T 4hkt_A 80 IER----FARA----GKAIFCEKPIDLDAERVRACLKVVSDT 113 (331)
T ss_dssp HHH----HHHT----TCEEEECSCSCSSHHHHHHHHHHHHHT
T ss_pred HHH----HHHc----CCcEEEecCCCCCHHHHHHHHHHHHHc
Confidence 332 2221 23355543 356678888888777664
No 143
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.85 E-value=1.1e-08 Score=91.69 Aligned_cols=106 Identities=14% Similarity=0.193 Sum_probs=78.4
Q ss_pred CCeEEEEccchhhHHHHHHHHhC--CCeEE-EEeCChhHHHHHHh-CCCCCcCCHHHHhh--cCCEEEEeCCCChhhHHH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKA--GYKMA-VHDVNCNVMKMFSD-MGVPTKETPFEVAE--ASDVVITMLPSSSHQVLD 78 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~--g~~V~-~~~r~~~~~~~l~~-~g~~~~~~~~~~~~--~adivi~~vp~~~~~~~~ 78 (316)
++||||||+|.||..++..|.+. ++++. ++|+++++.+.+.+ .|+...+|.+++++ ++|+|++|+|+..+ .+-
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h-~~~ 91 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGLH-PTQ 91 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGGGH-HHH
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcHHH-HHH
Confidence 46899999999999999999987 67755 89999999887765 47878899999987 79999999998876 333
Q ss_pred HhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 79 VYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
+.. .++. +..+++.. .+..+...+++.+...+.
T Consensus 92 ~~~----al~~----gk~v~~EKP~a~~~~~~~~l~~~a~~~ 125 (354)
T 3q2i_A 92 SIE----CSEA----GFHVMTEKPMATRWEDGLEMVKAADKA 125 (354)
T ss_dssp HHH----HHHT----TCEEEECSSSCSSHHHHHHHHHHHHHH
T ss_pred HHH----HHHC----CCCEEEeCCCcCCHHHHHHHHHHHHHh
Confidence 332 2221 22345443 245577777777766654
No 144
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.85 E-value=6.1e-09 Score=92.71 Aligned_cols=102 Identities=15% Similarity=0.124 Sum_probs=76.1
Q ss_pred CCeEEEEccchhhHHHHHHHHh--CCCeEEEEeCChhHHHHHHhC-----C--CCCcCCHHHHhhcCCEEEEeCCCChhh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMK--AGYKMAVHDVNCNVMKMFSDM-----G--VPTKETPFEVAEASDVVITMLPSSSHQ 75 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~--~g~~V~~~~r~~~~~~~l~~~-----g--~~~~~~~~~~~~~adivi~~vp~~~~~ 75 (316)
.++|+|||+|.||..++..|.. ...+|.+|||++++.+.+.+. | +..+++++++++++|+||+|+|...
T Consensus 129 ~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~-- 206 (350)
T 1x7d_A 129 ARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKA-- 206 (350)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSS--
T ss_pred CCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCC--
Confidence 4689999999999999998764 347899999999998888763 5 3456789999999999999999763
Q ss_pred HHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHH
Q 021213 76 VLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAV 116 (316)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~ 116 (316)
...++.. ..+ .+++.++++++..|. .+++...+
T Consensus 207 ~~pvl~~--~~l-----~~G~~V~~vgs~~p~-~~El~~~~ 239 (350)
T 1x7d_A 207 YATIITP--DML-----EPGMHLNAVGGDCPG-KTELHADV 239 (350)
T ss_dssp EEEEECG--GGC-----CTTCEEEECSCCBTT-BEEECHHH
T ss_pred CCceecH--HHc-----CCCCEEEECCCCCCC-ceeeCHHH
Confidence 2333321 122 356788999988776 34444433
No 145
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.85 E-value=8.3e-09 Score=91.31 Aligned_cols=65 Identities=18% Similarity=0.138 Sum_probs=53.3
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHH----h----CC----CCCcCCHHHHhhcCCEEEEeC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFS----D----MG----VPTKETPFEVAEASDVVITML 69 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~----~----~g----~~~~~~~~~~~~~adivi~~v 69 (316)
.|||+|||+|.||+++|..|+..|+ +|.+||+++++++... + .+ +..+++.++++++||+||+++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~ 86 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTA 86 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEcc
Confidence 3799999999999999999999998 9999999988765521 1 11 233578887899999999997
No 146
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.83 E-value=5.8e-09 Score=91.95 Aligned_cols=67 Identities=24% Similarity=0.318 Sum_probs=53.0
Q ss_pred CeEEEEccchhhHHHHHHHHhCCC--eEEEEeCChhHHHHHHh---C------CCCC-cCCHHHHhhcCCEEEEeCCCCh
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKMFSD---M------GVPT-KETPFEVAEASDVVITMLPSSS 73 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~--~V~~~~r~~~~~~~l~~---~------g~~~-~~~~~~~~~~adivi~~vp~~~ 73 (316)
|||+|||+|.||++++..|+++|+ +|++||+++++++.+.. . .... .++ .+.+++||+||+|+|.+.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCCC
Confidence 689999999999999999999999 99999999887766432 1 1111 234 466789999999998643
No 147
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.83 E-value=1.9e-08 Score=89.63 Aligned_cols=107 Identities=19% Similarity=0.319 Sum_probs=78.9
Q ss_pred CCeEEEEccchhhHHHHHHHHhC-CCeEE-EEeCChhHHHHHHh-CCCC-CcCCHHHHhh--cCCEEEEeCCCChhhHHH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKA-GYKMA-VHDVNCNVMKMFSD-MGVP-TKETPFEVAE--ASDVVITMLPSSSHQVLD 78 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~-g~~V~-~~~r~~~~~~~l~~-~g~~-~~~~~~~~~~--~adivi~~vp~~~~~~~~ 78 (316)
++||||||+|.||..++..|.+. ++++. ++|+++++.+.+.+ .|+. ..+|.+++++ ++|+|++|+|+..+ .+-
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h-~~~ 80 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTH-SEL 80 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGGH-HHH
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcch-HHH
Confidence 46999999999999999999885 56765 78999999887765 4654 6789999988 79999999998875 333
Q ss_pred HhcCCCCcccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHhhch
Q 021213 79 VYNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVSNCI 120 (316)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~vi~~s-t~~~~~~~~l~~~~~~~~ 120 (316)
+.. .++. +..+++..- +..+...+++.+...+.+
T Consensus 81 ~~~----al~~----gk~v~~EKP~~~~~~e~~~l~~~a~~~g 115 (344)
T 3ezy_A 81 VIA----CAKA----KKHVFCEKPLSLNLADVDRMIEETKKAD 115 (344)
T ss_dssp HHH----HHHT----TCEEEEESCSCSCHHHHHHHHHHHHHHT
T ss_pred HHH----HHhc----CCeEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 332 2221 234666543 566777888887766543
No 148
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.81 E-value=1.5e-08 Score=81.93 Aligned_cols=75 Identities=13% Similarity=0.179 Sum_probs=59.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhC-CCeEEEEeCChhHHHHHHhCCCCCc----CCH---HHH--hhcCCEEEEeCCCChh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKA-GYKMAVHDVNCNVMKMFSDMGVPTK----ETP---FEV--AEASDVVITMLPSSSH 74 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~-g~~V~~~~r~~~~~~~l~~~g~~~~----~~~---~~~--~~~adivi~~vp~~~~ 74 (316)
.++|.|+|+|.||..+++.|.+. |++|+++|+++++++.+.+.|.... ++. .++ ++++|+||+|+|++..
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~~~ 118 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHHQG 118 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCChHH
Confidence 46899999999999999999999 9999999999999998888776532 222 222 5678999999997654
Q ss_pred hHHHHh
Q 021213 75 QVLDVY 80 (316)
Q Consensus 75 ~~~~v~ 80 (316)
...++
T Consensus 119 -~~~~~ 123 (183)
T 3c85_A 119 -NQTAL 123 (183)
T ss_dssp -HHHHH
T ss_pred -HHHHH
Confidence 34443
No 149
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.80 E-value=2.4e-08 Score=89.25 Aligned_cols=108 Identities=19% Similarity=0.210 Sum_probs=79.3
Q ss_pred CCCCeEEEEccchhhH-HHHHHHHhC-CCeEE-EEeCChhHHHHHHh-CCCCCcCCHHHHhh--cCCEEEEeCCCChhhH
Q 021213 3 FFDQSVGFIGLGNMGF-RMASNLMKA-GYKMA-VHDVNCNVMKMFSD-MGVPTKETPFEVAE--ASDVVITMLPSSSHQV 76 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~-~la~~l~~~-g~~V~-~~~r~~~~~~~l~~-~g~~~~~~~~~~~~--~adivi~~vp~~~~~~ 76 (316)
|.++||||||+|.||. .++..|.+. +++|. ++|+++++.+.+.+ .|+...++.+++++ +.|+|++|+|+..+ .
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h-~ 103 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVLH-A 103 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGGH-H
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHHH-H
Confidence 4457999999999998 789999887 67765 78999998887765 47777789999986 58999999999876 4
Q ss_pred HHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 77 LDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
+-+.. .++. +..++++. .+..+...+++.+...+.
T Consensus 104 ~~~~~----al~a----Gk~Vl~EKP~a~~~~ea~~l~~~a~~~ 139 (350)
T 3rc1_A 104 EWIDR----ALRA----GKHVLAEKPLTTDRPQAERLFAVARER 139 (350)
T ss_dssp HHHHH----HHHT----TCEEEEESSSCSSHHHHHHHHHHHHHT
T ss_pred HHHHH----HHHC----CCcEEEeCCCCCCHHHHHHHHHHHHHh
Confidence 43332 2221 23455554 355677778887776654
No 150
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.80 E-value=1.5e-08 Score=89.58 Aligned_cols=66 Identities=21% Similarity=0.225 Sum_probs=52.8
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHH----h------C--CCCCcCCHHHHhhcCCEEEEeCC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFS----D------M--GVPTKETPFEVAEASDVVITMLP 70 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~----~------~--g~~~~~~~~~~~~~adivi~~vp 70 (316)
|.|||+|||+|.||+++|..|+..|+ +|.+||+++++++... + . .+..+++. +++++||+||++++
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg 91 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAG 91 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCC
Confidence 34799999999999999999999999 9999999988765321 1 0 13344666 78899999999983
No 151
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.79 E-value=2e-09 Score=83.65 Aligned_cols=98 Identities=15% Similarity=0.248 Sum_probs=71.9
Q ss_pred CCeEEEEcc----chhhHHHHHHHHhCCCeEEEEeCCh--hHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHH
Q 021213 5 DQSVGFIGL----GNMGFRMASNLMKAGYKMAVHDVNC--NVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLD 78 (316)
Q Consensus 5 ~~~IgiiG~----G~mG~~la~~l~~~g~~V~~~~r~~--~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~ 78 (316)
..+|+|||+ |.||..++++|.+.||+|+.+|++. +.+ .|.....|+.++.+.+|++++|+|... +.+
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-----~G~~~~~sl~el~~~~Dlvii~vp~~~--v~~ 85 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-----LGQQGYATLADVPEKVDMVDVFRNSEA--AWG 85 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE-----TTEECCSSTTTCSSCCSEEECCSCSTH--HHH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc-----CCeeccCCHHHcCCCCCEEEEEeCHHH--HHH
Confidence 468999999 8999999999999999977777764 322 477777888888889999999999654 788
Q ss_pred HhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 79 VYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
++.+. .+. ..+.++++.++. .+++.+.+.+.
T Consensus 86 v~~~~---~~~---g~~~i~i~~~~~----~~~l~~~a~~~ 116 (145)
T 2duw_A 86 VAQEA---IAI---GAKTLWLQLGVI----NEQAAVLAREA 116 (145)
T ss_dssp HHHHH---HHH---TCCEEECCTTCC----CHHHHHHHHTT
T ss_pred HHHHH---HHc---CCCEEEEcCChH----HHHHHHHHHHc
Confidence 77643 211 123477776655 35566666554
No 152
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.78 E-value=2.2e-08 Score=77.21 Aligned_cols=70 Identities=14% Similarity=0.246 Sum_probs=57.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCc----CCHHHH----hhcCCEEEEeCCCChh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTK----ETPFEV----AEASDVVITMLPSSSH 74 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~----~~~~~~----~~~adivi~~vp~~~~ 74 (316)
+++|.|+|+|.+|..+++.|.+.|++|+++|+++++++.+.+.|.... ++.+.+ ++++|+||+++|++..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~ 84 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYE 84 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHH
Confidence 468999999999999999999999999999999999999988775421 222211 3589999999998754
No 153
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.78 E-value=2.4e-08 Score=87.65 Aligned_cols=66 Identities=21% Similarity=0.208 Sum_probs=52.7
Q ss_pred CeEEEEccchhhHHHHHHHHhC--CCeEEEEeCChhHHHHHH---hCC---------CCCcCCHHHHhhcCCEEEEeCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKA--GYKMAVHDVNCNVMKMFS---DMG---------VPTKETPFEVAEASDVVITMLPS 71 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~--g~~V~~~~r~~~~~~~l~---~~g---------~~~~~~~~~~~~~adivi~~vp~ 71 (316)
|||+|||+|.||++++..|+.. |++|++||+++++++.+. ... +..+++.++ +++||+||+|+|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 6999999999999999999985 799999999988776542 111 233456666 8899999999976
Q ss_pred C
Q 021213 72 S 72 (316)
Q Consensus 72 ~ 72 (316)
+
T Consensus 80 p 80 (310)
T 1guz_A 80 P 80 (310)
T ss_dssp C
T ss_pred C
Confidence 4
No 154
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.77 E-value=3e-08 Score=88.39 Aligned_cols=106 Identities=15% Similarity=0.223 Sum_probs=77.5
Q ss_pred CCeEEEEccchhhHHHHHHHH-h-CCCeEE-EEeCChhHHHHHHh-CC--CCCcCCHHHHhhc--CCEEEEeCCCChhhH
Q 021213 5 DQSVGFIGLGNMGFRMASNLM-K-AGYKMA-VHDVNCNVMKMFSD-MG--VPTKETPFEVAEA--SDVVITMLPSSSHQV 76 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~-~-~g~~V~-~~~r~~~~~~~l~~-~g--~~~~~~~~~~~~~--adivi~~vp~~~~~~ 76 (316)
++||||||+|.||..++..|. + .++++. ++|+++++.+.+.+ .| ....+|.++++++ +|+|++|+|+..+ .
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h-~ 80 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAH-E 80 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGGH-H
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchhH-H
Confidence 469999999999999999998 4 467755 78999999887765 46 5678899999876 8999999998876 4
Q ss_pred HHHhcCCCCcccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHhhc
Q 021213 77 LDVYNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVSNC 119 (316)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~vi~~s-t~~~~~~~~l~~~~~~~ 119 (316)
+-+.. .++. +.++++..- +..+...+++.+...+.
T Consensus 81 ~~~~~----al~~----Gk~vl~EKP~a~~~~e~~~l~~~a~~~ 116 (344)
T 3mz0_A 81 SSVLK----AIKA----QKYVFCEKPLATTAEGCMRIVEEEIKV 116 (344)
T ss_dssp HHHHH----HHHT----TCEEEECSCSCSSHHHHHHHHHHHHHH
T ss_pred HHHHH----HHHC----CCcEEEcCCCCCCHHHHHHHHHHHHHH
Confidence 43332 2221 223555432 45677777887766654
No 155
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.76 E-value=3.2e-08 Score=87.37 Aligned_cols=106 Identities=15% Similarity=0.153 Sum_probs=73.7
Q ss_pred CCeEEEEccchhhH-HHHHHHHhC-CCeEEEEeCChhHHHHHHh-CCCCC-cCCHHHHh-hcCCEEEEeCCCChhhHHHH
Q 021213 5 DQSVGFIGLGNMGF-RMASNLMKA-GYKMAVHDVNCNVMKMFSD-MGVPT-KETPFEVA-EASDVVITMLPSSSHQVLDV 79 (316)
Q Consensus 5 ~~~IgiiG~G~mG~-~la~~l~~~-g~~V~~~~r~~~~~~~l~~-~g~~~-~~~~~~~~-~~adivi~~vp~~~~~~~~v 79 (316)
++||||||+|.||. .++..|.+. +++|.++|+++++.+.+.+ .|+.. ..+..+.+ .++|+|++|+|+..+ .+-+
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h-~~~~ 80 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVH-STLA 80 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGH-HHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhH-HHHH
Confidence 47999999999998 599988775 6787799999999887765 46653 44545555 689999999998765 3333
Q ss_pred hcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 80 YNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
.. .++. +..++++. .+.++...+++.+...+.
T Consensus 81 ~~----al~~----Gk~V~~EKP~~~~~~~~~~l~~~a~~~ 113 (323)
T 1xea_A 81 AF----FLHL----GIPTFVDKPLAASAQECENLYELAEKH 113 (323)
T ss_dssp HH----HHHT----TCCEEEESCSCSSHHHHHHHHHHHHHT
T ss_pred HH----HHHC----CCeEEEeCCCcCCHHHHHHHHHHHHhc
Confidence 22 2221 22356653 445677777777766654
No 156
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.76 E-value=1.7e-08 Score=90.52 Aligned_cols=110 Identities=12% Similarity=0.179 Sum_probs=77.4
Q ss_pred CCCCCCeEEEEccchhhHH-HHHHHHhC-CCeEE-EEeCChhHHHHHHhC--CCCCcCCHHHHhhc--CCEEEEeCCCCh
Q 021213 1 MLFFDQSVGFIGLGNMGFR-MASNLMKA-GYKMA-VHDVNCNVMKMFSDM--GVPTKETPFEVAEA--SDVVITMLPSSS 73 (316)
Q Consensus 1 ~~~~~~~IgiiG~G~mG~~-la~~l~~~-g~~V~-~~~r~~~~~~~l~~~--g~~~~~~~~~~~~~--adivi~~vp~~~ 73 (316)
|+|.++||||||+|.||.. ++..|.+. +.++. ++|+++++++.+.+. +....+|.++++++ .|+|++|+|+..
T Consensus 1 M~M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 80 (359)
T 3m2t_A 1 MSLSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQL 80 (359)
T ss_dssp --CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHHH
T ss_pred CCCCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcHH
Confidence 5566689999999999985 88888876 56765 889999998888765 46678899999875 599999999876
Q ss_pred hhHHHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 74 HQVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
+ .+-+.. .++. +..++++. .+......+++.+...+.
T Consensus 81 H-~~~~~~----al~a----GkhVl~EKPla~~~~e~~~l~~~a~~~ 118 (359)
T 3m2t_A 81 H-FEMGLL----AMSK----GVNVFVEKPPCATLEELETLIDAARRS 118 (359)
T ss_dssp H-HHHHHH----HHHT----TCEEEECSCSCSSHHHHHHHHHHHHHH
T ss_pred H-HHHHHH----HHHC----CCeEEEECCCcCCHHHHHHHHHHHHHc
Confidence 5 333332 2221 22345443 244567777777766654
No 157
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.75 E-value=4.9e-08 Score=74.86 Aligned_cols=69 Identities=17% Similarity=0.297 Sum_probs=54.6
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh-CCCCC----cCCHHHH----hhcCCEEEEeCCCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-MGVPT----KETPFEV----AEASDVVITMLPSSS 73 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~-~g~~~----~~~~~~~----~~~adivi~~vp~~~ 73 (316)
.|+|.|+|+|.+|..++..|.+.|++|+++++++++.+.+.+ .+... ..+...+ ++++|+||+|+|++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~ 81 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE 81 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCch
Confidence 479999999999999999999999999999999998887765 35422 1223221 467999999998764
No 158
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.72 E-value=9.9e-08 Score=84.31 Aligned_cols=105 Identities=14% Similarity=0.208 Sum_probs=76.6
Q ss_pred CeEEEEccchhhHHHHHHHHhC-CCeE-EEEeCChhHHHHHHhC-CC-CCcCCHHHHh-hcCCEEEEeCCCChhhHHHHh
Q 021213 6 QSVGFIGLGNMGFRMASNLMKA-GYKM-AVHDVNCNVMKMFSDM-GV-PTKETPFEVA-EASDVVITMLPSSSHQVLDVY 80 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~-g~~V-~~~~r~~~~~~~l~~~-g~-~~~~~~~~~~-~~adivi~~vp~~~~~~~~v~ 80 (316)
+||||||+|.||..++..|.+. ++++ .++|+++++.+.+.+. |. ...++.++++ .++|+|++|+|+..+ .+-+.
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~~h-~~~~~ 80 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSLH-FAQAK 80 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGGGH-HHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChHHH-HHHHH
Confidence 5899999999999999999886 4665 5899999988877664 54 5578899998 789999999998765 33332
Q ss_pred cCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 81 NGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 81 ~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
. .++. +..+++.. .+......+++.+...+.
T Consensus 81 ~----al~~----gk~V~~EKP~~~~~~~~~~l~~~a~~~ 112 (325)
T 2ho3_A 81 A----ALSA----GKHVILEKPAVSQPQEWFDLIQTAEKN 112 (325)
T ss_dssp H----HHHT----TCEEEEESSCCSSHHHHHHHHHHHHHT
T ss_pred H----HHHc----CCcEEEecCCcCCHHHHHHHHHHHHHc
Confidence 2 2221 23466664 455677777887776654
No 159
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.72 E-value=4.6e-08 Score=86.64 Aligned_cols=110 Identities=15% Similarity=0.222 Sum_probs=74.7
Q ss_pred CCCCCCeEEEEccchhhHHHHHHHHhCC-CeE-EEEeCChhHHHHHHh-CCCC-CcCCHHHHhh--cCCEEEEeCCCChh
Q 021213 1 MLFFDQSVGFIGLGNMGFRMASNLMKAG-YKM-AVHDVNCNVMKMFSD-MGVP-TKETPFEVAE--ASDVVITMLPSSSH 74 (316)
Q Consensus 1 ~~~~~~~IgiiG~G~mG~~la~~l~~~g-~~V-~~~~r~~~~~~~l~~-~g~~-~~~~~~~~~~--~adivi~~vp~~~~ 74 (316)
|.|.++||||||+|.||..++..|.+.+ .++ .++||++++.+.+.+ .|+. ..++.+++++ ++|+|++|+|+..+
T Consensus 1 M~m~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 80 (329)
T 3evn_A 1 MSLSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDH 80 (329)
T ss_dssp ----CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGH
T ss_pred CCCCceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHH
Confidence 5666689999999999999999988764 454 478999998877665 3654 6789999997 79999999998876
Q ss_pred hHHHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 75 QVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
.+-+.. .++. +..+++.. .+..+...+++.+...+.
T Consensus 81 -~~~~~~----al~a----Gk~Vl~EKP~a~~~~e~~~l~~~a~~~ 117 (329)
T 3evn_A 81 -YKVAKA----ALLA----GKHVLVEKPFTLTYDQANELFALAESC 117 (329)
T ss_dssp -HHHHHH----HHHT----TCEEEEESSCCSSHHHHHHHHHHHHHT
T ss_pred -HHHHHH----HHHC----CCeEEEccCCcCCHHHHHHHHHHHHHc
Confidence 333332 2221 23455553 245577777777776654
No 160
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.71 E-value=2.1e-08 Score=88.29 Aligned_cols=105 Identities=15% Similarity=0.210 Sum_probs=75.9
Q ss_pred CCeEEEEccchhhHHHHHHHHhC-CCe-EEEEeCChhHHHHHHhCCCCCcCCHHHHhh--cCCEEEEeCCCChhhHHHHh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKA-GYK-MAVHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITMLPSSSHQVLDVY 80 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~-g~~-V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~adivi~~vp~~~~~~~~v~ 80 (316)
++||||||+|.||..++..|.+. +++ |.++|+++++.+.+.+. +...++.+++++ ++|+|++|+|+..+ .+-+.
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~tp~~~h-~~~~~ 87 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG-CVIESDWRSVVSAPEVEAVIIATPPATH-AEITL 87 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT-CEEESSTHHHHTCTTCCEEEEESCGGGH-HHHHH
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh-CcccCCHHHHhhCCCCCEEEEeCChHHH-HHHHH
Confidence 47999999999999999999986 566 45899999887666555 556678899885 79999999998765 33332
Q ss_pred cCCCCcccCCCCCCCeEEEE-cCCCCHHHHHHHHHHHhhc
Q 021213 81 NGPNGLLQGGNSVRPQLLID-SSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 81 ~~~~~~~~~~~~~~~~~vi~-~st~~~~~~~~l~~~~~~~ 119 (316)
. .++. +..++++ ..+..+...+++.+...+.
T Consensus 88 ~----al~~----Gk~v~~eKP~~~~~~~~~~l~~~a~~~ 119 (315)
T 3c1a_A 88 A----AIAS----GKAVLVEKPLTLDLAEAEAVAAAAKAT 119 (315)
T ss_dssp H----HHHT----TCEEEEESSSCSCHHHHHHHHHHHHHH
T ss_pred H----HHHC----CCcEEEcCCCcCCHHHHHHHHHHHHHc
Confidence 2 2221 2246666 3455677777887776654
No 161
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.71 E-value=4.7e-08 Score=75.37 Aligned_cols=69 Identities=17% Similarity=0.168 Sum_probs=55.1
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCC----cCCHHHH----hhcCCEEEEeCCCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPT----KETPFEV----AEASDVVITMLPSSS 73 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~----~~~~~~~----~~~adivi~~vp~~~ 73 (316)
+++|.|+|+|.+|..+++.|.+.|++|+++|+++++++.+.+.+... .++.+.+ ++++|+||+++|++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~ 82 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDE 82 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHH
Confidence 46899999999999999999999999999999999999888776432 1222222 247899999998654
No 162
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.71 E-value=5.8e-08 Score=86.96 Aligned_cols=108 Identities=14% Similarity=0.204 Sum_probs=78.3
Q ss_pred CCCCeEEEEccchhhHHHHHHHH-h-CCCeEE-EEeCChhHHHHHHh-CC--CCCcCCHHHHhh--cCCEEEEeCCCChh
Q 021213 3 FFDQSVGFIGLGNMGFRMASNLM-K-AGYKMA-VHDVNCNVMKMFSD-MG--VPTKETPFEVAE--ASDVVITMLPSSSH 74 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~~la~~l~-~-~g~~V~-~~~r~~~~~~~l~~-~g--~~~~~~~~~~~~--~adivi~~vp~~~~ 74 (316)
|+++||||||+|.||..++..|. + .++++. ++|+++++++.+.+ .| ....++.+++++ +.|+|++|+|+..+
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 100 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEAH 100 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGGH
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHHH
Confidence 44579999999999999999998 4 367755 79999999887765 36 567889999987 48999999999876
Q ss_pred hHHHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 75 QVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
.+-+.. .++. +..+++.. .+..+...+++.+...+.
T Consensus 101 -~~~~~~----al~a----Gk~Vl~EKPla~~~~e~~~l~~~a~~~ 137 (357)
T 3ec7_A 101 -ADVAVA----ALNA----NKYVFCEKPLAVTAADCQRVIEAEQKN 137 (357)
T ss_dssp -HHHHHH----HHHT----TCEEEEESSSCSSHHHHHHHHHHHHHH
T ss_pred -HHHHHH----HHHC----CCCEEeecCccCCHHHHHHHHHHHHHh
Confidence 443332 2221 23455554 355677777887776654
No 163
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.71 E-value=1.4e-07 Score=83.54 Aligned_cols=105 Identities=11% Similarity=0.187 Sum_probs=75.6
Q ss_pred CeEEEEccchhhHHH-HHHHHhCCCeEE-EEeCChhHHHHHHh-CCCC-CcCCHHHHhh--cCCEEEEeCCCChhhHHHH
Q 021213 6 QSVGFIGLGNMGFRM-ASNLMKAGYKMA-VHDVNCNVMKMFSD-MGVP-TKETPFEVAE--ASDVVITMLPSSSHQVLDV 79 (316)
Q Consensus 6 ~~IgiiG~G~mG~~l-a~~l~~~g~~V~-~~~r~~~~~~~l~~-~g~~-~~~~~~~~~~--~adivi~~vp~~~~~~~~v 79 (316)
+||||||+|.||..+ +..|.+.++++. ++|+++++.+.+.+ .|+. ..++.+++++ ++|+|++|+|+..+ .+-+
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h-~~~~ 79 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELH-REQT 79 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGH-HHHH
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHh-HHHH
Confidence 589999999999998 888888778865 78999998877665 4664 6788999886 49999999998765 3333
Q ss_pred hcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 80 YNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
.. .++. +..++++. .+..+...+++.+...+.
T Consensus 80 ~~----al~~----Gk~v~~ekP~~~~~~~~~~l~~~a~~~ 112 (332)
T 2glx_A 80 LA----AIRA----GKHVLCEKPLAMTLEDAREMVVAAREA 112 (332)
T ss_dssp HH----HHHT----TCEEEECSSSCSSHHHHHHHHHHHHHH
T ss_pred HH----HHHC----CCeEEEeCCCcCCHHHHHHHHHHHHHc
Confidence 22 2221 22355543 455677777777776654
No 164
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.70 E-value=1.7e-08 Score=93.07 Aligned_cols=72 Identities=15% Similarity=0.088 Sum_probs=54.9
Q ss_pred CCCCCCeEEEEccchh-hHHHHHHHHhC-----CCeEEEEeCChhHHHHHHh--------CC----CCCcCCHHHHhhcC
Q 021213 1 MLFFDQSVGFIGLGNM-GFRMASNLMKA-----GYKMAVHDVNCNVMKMFSD--------MG----VPTKETPFEVAEAS 62 (316)
Q Consensus 1 ~~~~~~~IgiiG~G~m-G~~la~~l~~~-----g~~V~~~~r~~~~~~~l~~--------~g----~~~~~~~~~~~~~a 62 (316)
|+|++|||+|||+|.+ |.+++..|++. +++|.+||+++++++...+ .+ +..++|..+++++|
T Consensus 24 m~m~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~A 103 (472)
T 1u8x_X 24 MKKKSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDV 103 (472)
T ss_dssp --CCCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSC
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCC
Confidence 4444579999999999 66788888887 6799999999987654322 11 33456888899999
Q ss_pred CEEEEeCCCC
Q 021213 63 DVVITMLPSS 72 (316)
Q Consensus 63 divi~~vp~~ 72 (316)
|+||+++|.+
T Consensus 104 D~VViaag~~ 113 (472)
T 1u8x_X 104 DFVMAHIRVG 113 (472)
T ss_dssp SEEEECCCTT
T ss_pred CEEEEcCCCc
Confidence 9999999875
No 165
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=98.68 E-value=8.3e-08 Score=85.20 Aligned_cols=108 Identities=13% Similarity=0.210 Sum_probs=78.3
Q ss_pred CCCCeEEEEccchhhH-HHHHHHHhCCCeE-EEEeCChhHHHHHHhC--CCCCcCCHHHHhh--cCCEEEEeCCCChhhH
Q 021213 3 FFDQSVGFIGLGNMGF-RMASNLMKAGYKM-AVHDVNCNVMKMFSDM--GVPTKETPFEVAE--ASDVVITMLPSSSHQV 76 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~-~la~~l~~~g~~V-~~~~r~~~~~~~l~~~--g~~~~~~~~~~~~--~adivi~~vp~~~~~~ 76 (316)
|.++||||||+|.+|. .++..|...+++| .++|+++++.+.+.+. +....+|.+++++ +.|+|++|+|+..+ .
T Consensus 2 M~~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h-~ 80 (336)
T 2p2s_A 2 MKKIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDR-A 80 (336)
T ss_dssp --CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGH-H
T ss_pred CCccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhH-H
Confidence 3457999999999996 6778887778885 6899999988877663 5677889999986 68999999999876 4
Q ss_pred HHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 77 LDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
+-+.. .++. +.+++++. .+..+...+++.+...+.
T Consensus 81 ~~~~~----al~a----GkhVl~EKP~a~~~~e~~~l~~~a~~~ 116 (336)
T 2p2s_A 81 ELALR----TLDA----GKDFFTAKPPLTTLEQLDAVQRRVAET 116 (336)
T ss_dssp HHHHH----HHHT----TCEEEECSSCCSCHHHHHHHHHHHHHH
T ss_pred HHHHH----HHHC----CCcEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 44433 2221 22456653 455677777887776654
No 166
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.68 E-value=7.7e-08 Score=86.92 Aligned_cols=93 Identities=14% Similarity=0.151 Sum_probs=72.2
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
..++|+|+|+|.+|..+|+.|...|.+|++||+++.+.......|... .+++++++.+|+|+++..+.. ++.
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~-~sL~eal~~ADVVilt~gt~~-----iI~-- 281 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQV-LLVEDVVEEAHIFVTTTGNDD-----IIT-- 281 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHTTTCSEEEECSSCSC-----SBC--
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCee-cCHHHHHhhCCEEEECCCCcC-----ccC--
Confidence 357899999999999999999999999999999988776666667654 489999999999998765432 222
Q ss_pred CCcccCCCCCCCeEEEEcCCCCH
Q 021213 84 NGLLQGGNSVRPQLLIDSSTIDP 106 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~~ 106 (316)
...++. +.++.+++|++...+
T Consensus 282 ~e~l~~--MK~gAIVINvgRg~v 302 (436)
T 3h9u_A 282 SEHFPR--MRDDAIVCNIGHFDT 302 (436)
T ss_dssp TTTGGG--CCTTEEEEECSSSGG
T ss_pred HHHHhh--cCCCcEEEEeCCCCC
Confidence 123322 457789999997765
No 167
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.67 E-value=7e-08 Score=88.68 Aligned_cols=101 Identities=17% Similarity=0.135 Sum_probs=76.1
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
..++|+|||+|.||..+|+.+...|.+|++|||++.+.......|.. ..++++++++||+|++++.+. .++.
T Consensus 256 ~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~-~~~l~ell~~aDiVi~~~~t~-----~lI~-- 327 (479)
T 1v8b_A 256 SGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFN-VVTLDEIVDKGDFFITCTGNV-----DVIK-- 327 (479)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCE-ECCHHHHTTTCSEEEECCSSS-----SSBC--
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCE-ecCHHHHHhcCCEEEECCChh-----hhcC--
Confidence 35799999999999999999999999999999998876445556664 358999999999999996432 2221
Q ss_pred CCcccCCCCCCCeEEEEcCCCCHH-HHHHHHH
Q 021213 84 NGLLQGGNSVRPQLLIDSSTIDPQ-TSRNISA 114 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~~~-~~~~l~~ 114 (316)
...++. +.++.++||++...++ ..+.+.+
T Consensus 328 ~~~l~~--MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 328 LEHLLK--MKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp HHHHTT--CCTTCEEEECSSTTTSBCHHHHHT
T ss_pred HHHHhh--cCCCcEEEEeCCCCccccchhhhc
Confidence 012221 3467899999998873 5566655
No 168
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.66 E-value=1.5e-08 Score=90.90 Aligned_cols=102 Identities=18% Similarity=0.276 Sum_probs=72.2
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCC----CC--cCCHHHHhhcCCEEEEeCCCChhhHHH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGV----PT--KETPFEVAEASDVVITMLPSSSHQVLD 78 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~----~~--~~~~~~~~~~adivi~~vp~~~~~~~~ 78 (316)
.++|+|||+|.||..++..|++. ++|+++||++++++.+.+... .. ..++.++++++|+||.|+|...+ ..
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~--~~ 92 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLG--FK 92 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHHH--HH
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhhh--HH
Confidence 36899999999999999999998 999999999999988876431 11 23456778899999999996643 23
Q ss_pred HhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 021213 79 VYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 118 (316)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~ 118 (316)
+.. ..++ .++.++|++...+. .+.+.+...+
T Consensus 93 v~~---a~l~-----~G~~~vD~s~~~~~-~~~l~~~Ak~ 123 (365)
T 2z2v_A 93 SIK---AAIK-----SKVDMVDVSFMPEN-PLELRDEAEK 123 (365)
T ss_dssp HHH---HHHH-----TTCCEEECCCCSSC-GGGGHHHHHH
T ss_pred HHH---HHHH-----hCCeEEEccCCcHH-HHHHHHHHHH
Confidence 332 1222 45578888775443 2344444433
No 169
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.66 E-value=8.2e-08 Score=84.61 Aligned_cols=90 Identities=20% Similarity=0.235 Sum_probs=69.1
Q ss_pred CCeEEEEccchhhHHHHHHHHh--CCCeEEEEeCChhHHHHHHhC------CCCCcCCHHHHhhcCCEEEEeCCCChhhH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMK--AGYKMAVHDVNCNVMKMFSDM------GVPTKETPFEVAEASDVVITMLPSSSHQV 76 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~--~g~~V~~~~r~~~~~~~l~~~------g~~~~~~~~~~~~~adivi~~vp~~~~~~ 76 (316)
.++|+|||+|.||..++..|.+ ...+|.+|||++++.+.+.+. .+. ++++++++ ++|+|++|+|...
T Consensus 125 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v-~aDvVi~aTp~~~--- 199 (322)
T 1omo_A 125 SSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPAEEAS-RCDVLVTTTPSRK--- 199 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT-SSSEEEECCCCSS---
T ss_pred CCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCHHHHh-CCCEEEEeeCCCC---
Confidence 3689999999999999999987 347899999999998887652 234 67889999 9999999999753
Q ss_pred HHHhcCCCCcccCCCCCCCeEEEEcCCCCHH
Q 021213 77 LDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQ 107 (316)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~ 107 (316)
.++. ...+ .+++.|++.++..|.
T Consensus 200 -pv~~--~~~l-----~~G~~V~~ig~~~p~ 222 (322)
T 1omo_A 200 -PVVK--AEWV-----EEGTHINAIGADGPG 222 (322)
T ss_dssp -CCBC--GGGC-----CTTCEEEECSCCSTT
T ss_pred -ceec--HHHc-----CCCeEEEECCCCCCC
Confidence 2221 1122 356788888777765
No 170
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=98.65 E-value=4.8e-08 Score=86.36 Aligned_cols=106 Identities=20% Similarity=0.200 Sum_probs=81.2
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.+++||||+|++|..+|+.+..-|.+|.+||+.+.. ...+.+.. ..+.++++++||+|++++|-..+ .+.++..
T Consensus 141 g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~--~~~~~~~~-~~~l~ell~~sDivslh~Plt~~-T~~li~~-- 214 (334)
T 3kb6_A 141 RLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRE--DLKEKGCV-YTSLDELLKESDVISLHVPYTKE-THHMINE-- 214 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH--HHHHTTCE-ECCHHHHHHHCSEEEECCCCCTT-TTTCBCH--
T ss_pred CcEEEEECcchHHHHHHHhhcccCceeeecCCccch--hhhhcCce-ecCHHHHHhhCCEEEEcCCCChh-hccCcCH--
Confidence 368999999999999999999999999999987553 23444544 46899999999999999997654 5554432
Q ss_pred CcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 021213 85 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 118 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~ 118 (316)
..++. ++++.++||++-+..-..+.+.+.+..
T Consensus 215 ~~l~~--mk~~a~lIN~aRG~iVde~aL~~aL~~ 246 (334)
T 3kb6_A 215 ERISL--MKDGVYLINTARGKVVDTDALYRAYQR 246 (334)
T ss_dssp HHHHH--SCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred HHHhh--cCCCeEEEecCccccccHHHHHHHHHh
Confidence 23332 457889999999886666777777765
No 171
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.64 E-value=3.7e-08 Score=86.79 Aligned_cols=68 Identities=16% Similarity=0.317 Sum_probs=51.6
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCC--eEEEEeCChhHHH--HHH-hCCC------CC--cCCHHHHhhcCCEEEEeCC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMK--MFS-DMGV------PT--KETPFEVAEASDVVITMLP 70 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~--~V~~~~r~~~~~~--~l~-~~g~------~~--~~~~~~~~~~adivi~~vp 70 (316)
++|||+|||+|.||+.++..|+++|+ +|++|||++++++ .+. +.+. .. .++ .+.++++|+||+|++
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~aD~Vii~v~ 84 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDD-PEICRDADMVVITAG 84 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESC-GGGGTTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCC-HHHhCCCCEEEECCC
Confidence 35799999999999999999999999 9999999987765 221 2221 11 123 356789999999996
Q ss_pred CC
Q 021213 71 SS 72 (316)
Q Consensus 71 ~~ 72 (316)
.+
T Consensus 85 ~~ 86 (319)
T 1lld_A 85 PR 86 (319)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 172
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.64 E-value=3.6e-08 Score=77.39 Aligned_cols=70 Identities=19% Similarity=0.197 Sum_probs=55.3
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHH-hCCCCCc----CCHHH---H-hhcCCEEEEeCCCChh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS-DMGVPTK----ETPFE---V-AEASDVVITMLPSSSH 74 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~-~~g~~~~----~~~~~---~-~~~adivi~~vp~~~~ 74 (316)
.++|.|+|+|.+|..+++.|.+.|++|+++++++++.+.+. +.|.... .+.+. + ++++|+||+|+|++..
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~~ 97 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDDST 97 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCcHH
Confidence 47899999999999999999999999999999999887776 5554321 12222 2 5679999999997653
No 173
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.64 E-value=9e-08 Score=88.28 Aligned_cols=99 Identities=15% Similarity=0.141 Sum_probs=73.3
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
..++|+|||+|.+|..+|+.+...|.+|++|||++.+.......|... .+++++++++|+|++++.+.. ++.
T Consensus 276 ~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~-~~l~ell~~aDiVi~~~~t~~-----lI~-- 347 (494)
T 3d64_A 276 AGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRV-VTMEYAADKADIFVTATGNYH-----VIN-- 347 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEE-CCHHHHTTTCSEEEECSSSSC-----SBC--
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEe-CCHHHHHhcCCEEEECCCccc-----ccC--
Confidence 357999999999999999999999999999999988754444556553 579999999999999984332 221
Q ss_pred CCcccCCCCCCCeEEEEcCCCCHH-HHHHH
Q 021213 84 NGLLQGGNSVRPQLLIDSSTIDPQ-TSRNI 112 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~~~-~~~~l 112 (316)
...++. ++++.++||++.+... ..+.+
T Consensus 348 ~~~l~~--MK~gAilINvgrg~veID~~aL 375 (494)
T 3d64_A 348 HDHMKA--MRHNAIVCNIGHFDSEIDVAST 375 (494)
T ss_dssp HHHHHH--CCTTEEEEECSSSSCSBCCGGG
T ss_pred HHHHhh--CCCCcEEEEcCCCcchhchHHH
Confidence 012221 3467899999998763 33444
No 174
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.64 E-value=2e-07 Score=82.70 Aligned_cols=107 Identities=14% Similarity=0.155 Sum_probs=77.2
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCC---Ce-EEEEeCChhHHHHHHh-CCC-CCcCCHHHHhh--cCCEEEEeCCCChhh
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAG---YK-MAVHDVNCNVMKMFSD-MGV-PTKETPFEVAE--ASDVVITMLPSSSHQ 75 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g---~~-V~~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~adivi~~vp~~~~~ 75 (316)
|++||||||+|.||..++..|.+.+ ++ |.++||++++.+.+.+ .|+ ...+|.+++++ +.|+|++|+|+..+
T Consensus 1 M~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H- 79 (334)
T 3ohs_X 1 MALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQH- 79 (334)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGGH-
T ss_pred CccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHH-
Confidence 3479999999999999999998764 34 5578999999887765 466 46789999987 69999999999876
Q ss_pred HHHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 76 VLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
.+-+.. .++. +.++++.. .+......+++.+...+.
T Consensus 80 ~~~~~~----al~~----GkhVl~EKP~a~~~~e~~~l~~~a~~~ 116 (334)
T 3ohs_X 80 KAAVML----CLAA----GKAVLCEKPMGVNAAEVREMVTEARSR 116 (334)
T ss_dssp HHHHHH----HHHT----TCEEEEESSSSSSHHHHHHHHHHHHHT
T ss_pred HHHHHH----HHhc----CCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 443332 2221 23455553 345677777887776654
No 175
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.63 E-value=6.9e-08 Score=84.46 Aligned_cols=67 Identities=18% Similarity=0.190 Sum_probs=49.6
Q ss_pred CeEEEEccchhhHHHHHHHHhCCC--eEEEEeCChhHHHHHHh---CC------CCCcCCHHHHhhcCCEEEEeCCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKMFSD---MG------VPTKETPFEVAEASDVVITMLPSS 72 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~--~V~~~~r~~~~~~~l~~---~g------~~~~~~~~~~~~~adivi~~vp~~ 72 (316)
|||+|||+|.||++++..|+..|+ +|.+||+++++++.... .+ .+...+..+++++||+||++++.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~~aDvVIi~~~~~ 78 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQVVILTAGAN 78 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGTTCSEEEECC---
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 699999999999999999999999 99999999886643221 11 112112346788999999998543
No 176
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.63 E-value=1.2e-07 Score=83.44 Aligned_cols=64 Identities=22% Similarity=0.258 Sum_probs=51.4
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHH----Hh------CC--CCCcCCHHHHhhcCCEEEEeC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMF----SD------MG--VPTKETPFEVAEASDVVITML 69 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l----~~------~g--~~~~~~~~~~~~~adivi~~v 69 (316)
.|||+|||+|.||.+++..|+..|+ +|.+||+++++++.. .+ .. +..+++. +++++||+||+++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTA 80 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence 4799999999999999999999998 999999998876432 11 11 2233566 7889999999997
No 177
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.63 E-value=2.1e-07 Score=82.94 Aligned_cols=105 Identities=19% Similarity=0.316 Sum_probs=74.5
Q ss_pred CCeEEEEccchhhHHHHHHHH-h-CCCe-EEEEeCChhHHHHHHh-CCC-CCcCCHHHHhh--cCCEEEEeCCCChhhHH
Q 021213 5 DQSVGFIGLGNMGFRMASNLM-K-AGYK-MAVHDVNCNVMKMFSD-MGV-PTKETPFEVAE--ASDVVITMLPSSSHQVL 77 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~-~-~g~~-V~~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~adivi~~vp~~~~~~~ 77 (316)
++||+|||+|.||..++..|. + .+++ |.++|+++++.+.+.+ .|+ ...++.+++++ ++|+|++|+|+..+ .+
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h-~~ 86 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFH-PE 86 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGH-HH
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhH-HH
Confidence 479999999999999999998 5 3677 4578999999887765 466 46788999886 69999999998765 33
Q ss_pred HHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhh
Q 021213 78 DVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSN 118 (316)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~ 118 (316)
.+.. .++. +..++++. .+..+...+++.+...+
T Consensus 87 ~~~~----al~~----G~~v~~eKp~~~~~~~~~~l~~~a~~ 120 (346)
T 3cea_A 87 MTIY----AMNA----GLNVFCEKPLGLDFNEVDEMAKVIKS 120 (346)
T ss_dssp HHHH----HHHT----TCEEEECSCCCSCHHHHHHHHHHHHT
T ss_pred HHHH----HHHC----CCEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 3332 2221 22355542 34456666677766554
No 178
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.61 E-value=2.3e-07 Score=81.27 Aligned_cols=67 Identities=18% Similarity=0.188 Sum_probs=51.6
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHH----HhC------CC--CCcCCHHHHhhcCCEEEEeCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMF----SDM------GV--PTKETPFEVAEASDVVITMLPS 71 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l----~~~------g~--~~~~~~~~~~~~adivi~~vp~ 71 (316)
+|||+|||+|.||..++..|+..|+ +|.++|+++++++.. .+. .. ..+++. +++++||+||++++.
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~ 80 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGA 80 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCC
Confidence 4799999999999999999999997 999999998765432 111 12 223566 778999999999754
Q ss_pred C
Q 021213 72 S 72 (316)
Q Consensus 72 ~ 72 (316)
+
T Consensus 81 p 81 (309)
T 1ur5_A 81 P 81 (309)
T ss_dssp -
T ss_pred C
Confidence 3
No 179
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.61 E-value=7.9e-08 Score=83.73 Aligned_cols=106 Identities=9% Similarity=0.003 Sum_probs=72.4
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHHhC-CC---CCc--CCHHHHhhcCCEEEEeCCCChhh-H
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDM-GV---PTK--ETPFEVAEASDVVITMLPSSSHQ-V 76 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~~~-g~---~~~--~~~~~~~~~adivi~~vp~~~~~-~ 76 (316)
.++|.|||+|.||.+++..|.+.|. +|++|+|++++++.+.+. +. ... .++.+.++++|+||.|+|..... .
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~~~~~ 220 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGMHPRV 220 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTCSSCC
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCCCCCC
Confidence 4789999999999999999999997 999999999998887653 32 221 24556678899999999976420 0
Q ss_pred HHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 021213 77 LDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 118 (316)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~ 118 (316)
..+... ... ..++.+++|++.. |..++ +.+...+
T Consensus 221 ~~~~i~-~~~-----l~~~~~v~D~~y~-P~~T~-ll~~A~~ 254 (297)
T 2egg_A 221 EVQPLS-LER-----LRPGVIVSDIIYN-PLETK-WLKEAKA 254 (297)
T ss_dssp SCCSSC-CTT-----CCTTCEEEECCCS-SSSCH-HHHHHHH
T ss_pred CCCCCC-HHH-----cCCCCEEEEcCCC-CCCCH-HHHHHHH
Confidence 001000 111 2356799999986 43333 4444443
No 180
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.59 E-value=4.4e-08 Score=89.58 Aligned_cols=71 Identities=20% Similarity=0.248 Sum_probs=56.7
Q ss_pred CCCCCCeEEEEccchh--hHHHHHHHHh----CCCeEEEEeCChhHHHHHHhC---------CCCCcCCHHHHhhcCCEE
Q 021213 1 MLFFDQSVGFIGLGNM--GFRMASNLMK----AGYKMAVHDVNCNVMKMFSDM---------GVPTKETPFEVAEASDVV 65 (316)
Q Consensus 1 ~~~~~~~IgiiG~G~m--G~~la~~l~~----~g~~V~~~~r~~~~~~~l~~~---------g~~~~~~~~~~~~~adiv 65 (316)
|.|++|||+|||+|.| |..++..|+. .| +|++||+++++++.+... .+..++|.++++++||+|
T Consensus 1 m~m~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfV 79 (450)
T 3fef_A 1 MSLDQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIV 79 (450)
T ss_dssp --CCCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEE
T ss_pred CCCCCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEE
Confidence 6667789999999995 6899999886 56 999999999887655431 245678899999999999
Q ss_pred EEeCCCC
Q 021213 66 ITMLPSS 72 (316)
Q Consensus 66 i~~vp~~ 72 (316)
|++++..
T Consensus 80 I~airvG 86 (450)
T 3fef_A 80 IISILPG 86 (450)
T ss_dssp EECCCSS
T ss_pred EeccccC
Confidence 9999754
No 181
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.58 E-value=9e-08 Score=86.02 Aligned_cols=95 Identities=15% Similarity=0.188 Sum_probs=67.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCc-----------------------------CCH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTK-----------------------------ETP 55 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~-----------------------------~~~ 55 (316)
..||+|||+|.+|..+++.+...|.+|++||+++++.+.+.+.|.+.. .++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l 269 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALV 269 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhHH
Confidence 468999999999999999999999999999999999888887765321 145
Q ss_pred HHHhhcCCEEEEeCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCC
Q 021213 56 FEVAEASDVVITMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSST 103 (316)
Q Consensus 56 ~~~~~~adivi~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st 103 (316)
.+.++++|+||.|+..+......++. ++.++. +.++.+|||++.
T Consensus 270 ~e~l~~aDVVI~tvlipg~~ap~Lvt--~emv~~--Mk~GsVIVDvA~ 313 (405)
T 4dio_A 270 AEHIAKQDIVITTALIPGRPAPRLVT--REMLDS--MKPGSVVVDLAV 313 (405)
T ss_dssp HHHHHTCSEEEECCCCSSSCCCCCBC--HHHHTT--SCTTCEEEETTG
T ss_pred HHHhcCCCEEEECCcCCCCCCCEEec--HHHHhc--CCCCCEEEEEeC
Confidence 67889999999985322100011110 122222 346779999884
No 182
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.57 E-value=1.4e-07 Score=82.67 Aligned_cols=89 Identities=22% Similarity=0.338 Sum_probs=66.4
Q ss_pred CCeEEEEccchhhHHHHHHHHhC--CCeEEEEeCChhHHHHHHh-----CCCC--CcCCHHHHhhcCCEEEEeCCCChhh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKA--GYKMAVHDVNCNVMKMFSD-----MGVP--TKETPFEVAEASDVVITMLPSSSHQ 75 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~--g~~V~~~~r~~~~~~~l~~-----~g~~--~~~~~~~~~~~adivi~~vp~~~~~ 75 (316)
.++|+|||+|.||..++..|.+. ..+|.+|||+ +.+.+.+ .|+. .+ +++++++++|+||+|+|...
T Consensus 121 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~g~~~~~~-~~~eav~~aDIVi~aT~s~~-- 195 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRCGVPARMA-APADIAAQADIVVTATRSTT-- 195 (313)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHHTSCEEEC-CHHHHHHHCSEEEECCCCSS--
T ss_pred CcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhcCCeEEEe-CHHHHHhhCCEEEEccCCCC--
Confidence 36899999999999999999863 4689999999 4444433 2553 45 89999999999999998753
Q ss_pred HHHHhcCCCCcccCCCCCCCeEEEEcCCCCHH
Q 021213 76 VLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQ 107 (316)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~ 107 (316)
.++. .+.+ .++.+|+++++..|+
T Consensus 196 --pvl~--~~~l-----~~G~~V~~vGs~~p~ 218 (313)
T 3hdj_A 196 --PLFA--GQAL-----RAGAFVGAIGSSLPH 218 (313)
T ss_dssp --CSSC--GGGC-----CTTCEEEECCCSSTT
T ss_pred --cccC--HHHc-----CCCcEEEECCCCCCc
Confidence 2222 1223 366789999988776
No 183
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.57 E-value=4.4e-07 Score=81.38 Aligned_cols=108 Identities=15% Similarity=0.167 Sum_probs=76.0
Q ss_pred CCCeEEEEccchhhHHHHHHHHhC-CCeE-EEEeCChhHHHHHHh-CCC----CCcCCHHHHhh--cCCEEEEeCCCChh
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKA-GYKM-AVHDVNCNVMKMFSD-MGV----PTKETPFEVAE--ASDVVITMLPSSSH 74 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~-g~~V-~~~~r~~~~~~~l~~-~g~----~~~~~~~~~~~--~adivi~~vp~~~~ 74 (316)
.++||||||+|.||..++..|.+. ++++ .++|+++++.+.+.+ .|+ ...++.+++++ ++|+|++|+|+..+
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 84 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLH 84 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGGH
T ss_pred CceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHHH
Confidence 357999999999999999999875 4565 578999998877665 453 45678999886 58999999998775
Q ss_pred hHHHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhch
Q 021213 75 QVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNCI 120 (316)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~~ 120 (316)
.+-+.. .++ .+..+++.. .+......+++.+...+.+
T Consensus 85 -~~~~~~----al~----aGk~V~~EKP~a~~~~e~~~l~~~a~~~g 122 (362)
T 1ydw_A 85 -VEWAIK----AAE----KGKHILLEKPVAMNVTEFDKIVDACEANG 122 (362)
T ss_dssp -HHHHHH----HHT----TTCEEEECSSCSSSHHHHHHHHHHHHTTT
T ss_pred -HHHHHH----HHH----CCCeEEEecCCcCCHHHHHHHHHHHHHcC
Confidence 333322 222 122355543 3456777788877776644
No 184
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.56 E-value=3.5e-07 Score=76.91 Aligned_cols=59 Identities=20% Similarity=0.231 Sum_probs=48.2
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEE-EEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMA-VHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITML 69 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~-~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~v 69 (316)
+|||+|+|+|+||..+++.+.+.++++. ++|++++. ..|+...+++++++ ++|++|-++
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~-----~~gv~v~~dl~~l~-~~DVvIDft 62 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA-----TTPYQQYQHIADVK-GADVAIDFS 62 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-------CCSCBCSCTTTCT-TCSEEEECS
T ss_pred ceEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc-----cCCCceeCCHHHHh-CCCEEEEeC
Confidence 3799999999999999999999877755 47887662 46788888888888 999998654
No 185
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.55 E-value=9.1e-08 Score=85.31 Aligned_cols=90 Identities=19% Similarity=0.224 Sum_probs=67.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcC-------------------------CHHHHh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKE-------------------------TPFEVA 59 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~-------------------------~~~~~~ 59 (316)
..||+|||+|.+|...++.+...|.+|++|||++++.+.+.+.|.+... ++.+.+
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l 263 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAI 263 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHH
Confidence 4689999999999999999999999999999999999888887754322 456788
Q ss_pred hcCCEEEEeC--CCChh---hHHHHhcCCCCcccCCCCCCCeEEEEcCC
Q 021213 60 EASDVVITML--PSSSH---QVLDVYNGPNGLLQGGNSVRPQLLIDSST 103 (316)
Q Consensus 60 ~~adivi~~v--p~~~~---~~~~v~~~~~~~~~~~~~~~~~~vi~~st 103 (316)
+++|+||.++ |.... ..++.+.. +.++.+|||++.
T Consensus 264 ~~aDIVI~tv~iPg~~ap~Lvt~emv~~---------MkpGsVIVDvA~ 303 (381)
T 3p2y_A 264 TKFDIVITTALVPGRPAPRLVTAAAATG---------MQPGSVVVDLAG 303 (381)
T ss_dssp TTCSEEEECCCCTTSCCCCCBCHHHHHT---------SCTTCEEEETTG
T ss_pred hcCCEEEECCCCCCcccceeecHHHHhc---------CCCCcEEEEEeC
Confidence 9999999986 43111 01233322 336679999874
No 186
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.55 E-value=1.8e-07 Score=81.80 Aligned_cols=102 Identities=20% Similarity=0.204 Sum_probs=62.3
Q ss_pred CCCeEEEEccchhhHHHHHHHHhC-CCeEE-EEeCChhHHHHHHhCCCCC--cCCHHHHhhcCCEEEEeCCCChhhHHHH
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKA-GYKMA-VHDVNCNVMKMFSDMGVPT--KETPFEVAEASDVVITMLPSSSHQVLDV 79 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~-g~~V~-~~~r~~~~~~~l~~~g~~~--~~~~~~~~~~adivi~~vp~~~~~~~~v 79 (316)
+++||+|||+|+||..++..|.+. ++++. ++|+++++++. .|+.. .++..+. .++|+|++|+|...+ .+.+
T Consensus 8 ~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~---~g~~~~~~~~l~~~-~~~DvViiatp~~~h-~~~~ 82 (304)
T 3bio_A 8 KKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF---ELQPFRVVSDIEQL-ESVDVALVCSPSREV-ERTA 82 (304)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------CCTTSCEESSGGGS-SSCCEEEECSCHHHH-HHHH
T ss_pred CCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH---cCCCcCCHHHHHhC-CCCCEEEECCCchhh-HHHH
Confidence 357999999999999999999874 57776 78999887654 55542 3344444 689999999998765 3333
Q ss_pred hcCCCCcccCCCCCCCeEEEEcCCC---CHHHHHHHHHHHhhc
Q 021213 80 YNGPNGLLQGGNSVRPQLLIDSSTI---DPQTSRNISAAVSNC 119 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~vi~~st~---~~~~~~~l~~~~~~~ 119 (316)
.. .++ .++.+++.+.. .+...+++.+...+.
T Consensus 83 ~~----al~-----aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~ 116 (304)
T 3bio_A 83 LE----ILK-----KGICTADSFDIHDGILALRRSLGDAAGKS 116 (304)
T ss_dssp HH----HHT-----TTCEEEECCCCGGGHHHHHHHHHHHHHHH
T ss_pred HH----HHH-----cCCeEEECCCCCCCCHHHHHHHHHHHHhC
Confidence 22 222 34456665532 344555666555543
No 187
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=98.54 E-value=3e-07 Score=85.01 Aligned_cols=91 Identities=16% Similarity=0.172 Sum_probs=72.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHH-HHhcCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVL-DVYNGP 83 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~-~v~~~~ 83 (316)
.++|+|+|+|.+|..+++.+...|++|+++|+++.+.+...+.|+. ..+.+++++.+|+||.|+++... +. +.+..
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~-~~~l~e~l~~aDvVi~atgt~~~-i~~~~l~~- 350 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFD-VVTVEEAIGDADIVVTATGNKDI-IMLEHIKA- 350 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCHHHHGGGCSEEEECSSSSCS-BCHHHHHH-
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCE-EecHHHHHhCCCEEEECCCCHHH-HHHHHHHh-
Confidence 4789999999999999999999999999999999988777778876 35788889999999999976542 22 22221
Q ss_pred CCcccCCCCCCCeEEEEcCCCCH
Q 021213 84 NGLLQGGNSVRPQLLIDSSTIDP 106 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~~ 106 (316)
+.++.++++.+....
T Consensus 351 --------mk~ggilvnvG~~~~ 365 (494)
T 3ce6_A 351 --------MKDHAILGNIGHFDN 365 (494)
T ss_dssp --------SCTTCEEEECSSSGG
T ss_pred --------cCCCcEEEEeCCCCC
Confidence 235668899887653
No 188
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=98.51 E-value=3.9e-07 Score=83.67 Aligned_cols=106 Identities=15% Similarity=0.231 Sum_probs=75.7
Q ss_pred CCeEEEEccchhhH-HHHHHHHhC-CCeE-EEEeCChhHHHHHHh-CCCC-----CcCCHHHHhh--cCCEEEEeCCCCh
Q 021213 5 DQSVGFIGLGNMGF-RMASNLMKA-GYKM-AVHDVNCNVMKMFSD-MGVP-----TKETPFEVAE--ASDVVITMLPSSS 73 (316)
Q Consensus 5 ~~~IgiiG~G~mG~-~la~~l~~~-g~~V-~~~~r~~~~~~~l~~-~g~~-----~~~~~~~~~~--~adivi~~vp~~~ 73 (316)
++||||||+|.||. .++..|.+. ++++ .++|+++++.+.+.+ .|+. ..++.+++++ ++|+|++|+|+..
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~~~ 162 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSL 162 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGG
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCchh
Confidence 47999999999997 899998875 4664 589999998877765 4654 4678899887 7899999999887
Q ss_pred hhHHHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 74 HQVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
+ .+-+.. .++. +..+++.. .+......+++.+...+.
T Consensus 163 h-~~~~~~----al~a----Gk~Vl~EKPla~~~~e~~~l~~~a~~~ 200 (433)
T 1h6d_A 163 H-AEFAIR----AFKA----GKHVMCEKPMATSVADCQRMIDAAKAA 200 (433)
T ss_dssp H-HHHHHH----HHHT----TCEEEECSSCCSSHHHHHHHHHHHHHH
T ss_pred H-HHHHHH----HHHC----CCcEEEcCCCCCCHHHHHHHHHHHHHh
Confidence 6 443332 2221 22355553 345577777777766654
No 189
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=98.50 E-value=5.7e-07 Score=80.33 Aligned_cols=104 Identities=17% Similarity=0.333 Sum_probs=73.8
Q ss_pred CCeEEEEccchhhHH-HHHHHHhC-CCeEE-EEeCChhHHHHHHh-CCCCCcCCHHHHhhc--CCEEEEeCCCChhhHHH
Q 021213 5 DQSVGFIGLGNMGFR-MASNLMKA-GYKMA-VHDVNCNVMKMFSD-MGVPTKETPFEVAEA--SDVVITMLPSSSHQVLD 78 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~-la~~l~~~-g~~V~-~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~--adivi~~vp~~~~~~~~ 78 (316)
++||||||+|.||.. .+..+.+. +.+|. ++|+++++.+ .+ .+....+|.++++++ .|+|++|+|+..+ .+-
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~--~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H-~~~ 83 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH--ADWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTH-FPL 83 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH--TTCSSCCEESCHHHHHHCSSCCEEEECSCTTTH-HHH
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH--hhCCCCceECCHHHHhcCCCCCEEEEeCChHHH-HHH
Confidence 479999999999997 77777765 56764 7899988776 22 356778899999975 8999999999876 444
Q ss_pred HhcCCCCcccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHhhc
Q 021213 79 VYNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVSNC 119 (316)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~vi~~s-t~~~~~~~~l~~~~~~~ 119 (316)
+.. .++. +.++++..- +......+++.+...+.
T Consensus 84 ~~~----al~a----GkhV~~EKPla~~~~e~~~l~~~a~~~ 117 (352)
T 3kux_A 84 AQS----ALAA----GKHVVVDKPFTVTLSQANALKEHADDA 117 (352)
T ss_dssp HHH----HHHT----TCEEEECSSCCSCHHHHHHHHHHHHHT
T ss_pred HHH----HHHC----CCcEEEECCCcCCHHHHHHHHHHHHHc
Confidence 332 2221 234555543 45677777777776654
No 190
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.50 E-value=5.5e-07 Score=80.82 Aligned_cols=104 Identities=20% Similarity=0.247 Sum_probs=71.9
Q ss_pred CCeEEEEccchhhHH-HHHHHHhC-CCeEE-EEeCChhHHHHHHhCCCCCcCCHHHHhh--cCCEEEEeCCCChhhHHHH
Q 021213 5 DQSVGFIGLGNMGFR-MASNLMKA-GYKMA-VHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITMLPSSSHQVLDV 79 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~-la~~l~~~-g~~V~-~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~adivi~~vp~~~~~~~~v 79 (316)
++||||||+|.||.. .+..+.+. +.+|. ++|+++++++. ...+....+|.+++++ +.|+|++|+|+..+ .+-+
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H-~~~~ 84 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKR-DLPDVTVIASPEAAVQHPDVDLVVIASPNATH-APLA 84 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHH-HCTTSEEESCHHHHHTCTTCSEEEECSCGGGH-HHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHh-hCCCCcEECCHHHHhcCCCCCEEEEeCChHHH-HHHH
Confidence 468999999999996 67777665 56764 78999987652 1235667889999997 78999999999876 4443
Q ss_pred hcCCCCcccCCCCCCCeEEEEcC--CCCHHHHHHHHHHHhhc
Q 021213 80 YNGPNGLLQGGNSVRPQLLIDSS--TIDPQTSRNISAAVSNC 119 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~vi~~s--t~~~~~~~~l~~~~~~~ 119 (316)
.. .++ .++-|+.-. +......+++.+...+.
T Consensus 85 ~~----al~-----aGk~Vl~EKPla~~~~e~~~l~~~a~~~ 117 (364)
T 3e82_A 85 RL----ALN-----AGKHVVVDKPFTLDMQEARELIALAEEK 117 (364)
T ss_dssp HH----HHH-----TTCEEEECSCSCSSHHHHHHHHHHHHHT
T ss_pred HH----HHH-----CCCcEEEeCCCcCCHHHHHHHHHHHHHh
Confidence 32 222 223333333 45677777777776654
No 191
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.49 E-value=1.8e-07 Score=82.26 Aligned_cols=71 Identities=25% Similarity=0.260 Sum_probs=54.8
Q ss_pred CCCCCCeEEEEccchhhHHHHHHHHhCCC--eEEEEeCChhHHHH----HHhC------CCCCcCCHHHHhhcCCEEEEe
Q 021213 1 MLFFDQSVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKM----FSDM------GVPTKETPFEVAEASDVVITM 68 (316)
Q Consensus 1 ~~~~~~~IgiiG~G~mG~~la~~l~~~g~--~V~~~~r~~~~~~~----l~~~------g~~~~~~~~~~~~~adivi~~ 68 (316)
|....|||+|||+|.||.+++..|+..|+ +|.++|+++++++. +.+. ++...++..+++++||+||++
T Consensus 1 m~~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ 80 (326)
T 3pqe_A 1 MNKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCIC 80 (326)
T ss_dssp -CCSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEEC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEe
Confidence 54556899999999999999999999886 89999999887654 4432 223334445778999999998
Q ss_pred CCC
Q 021213 69 LPS 71 (316)
Q Consensus 69 vp~ 71 (316)
.+.
T Consensus 81 ag~ 83 (326)
T 3pqe_A 81 AGA 83 (326)
T ss_dssp CSC
T ss_pred ccc
Confidence 643
No 192
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.48 E-value=1.2e-07 Score=81.36 Aligned_cols=96 Identities=14% Similarity=0.042 Sum_probs=65.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHHhCC-CCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMG-VPTKETPFEVAEASDVVITMLPSSSHQVLDVYNG 82 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~~~g-~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~ 82 (316)
.+++.|+|+|.||.+++..|.+.|. +|++++|++++.+.+.+.. .....+..++++++|+||.|+|.... ..+-..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~--~~~~~~ 194 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMN--GNTDSV 194 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC---------CCS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCC--CCCcCC
Confidence 4689999999999999999999998 8999999999877665421 11223455667899999999997521 111001
Q ss_pred C-CCcccCCCCCCCeEEEEcCCCCHH
Q 021213 83 P-NGLLQGGNSVRPQLLIDSSTIDPQ 107 (316)
Q Consensus 83 ~-~~~~~~~~~~~~~~vi~~st~~~~ 107 (316)
+ ... ..++.+++|+...+..
T Consensus 195 l~~~~-----l~~~~~V~D~vY~P~~ 215 (277)
T 3don_A 195 ISLNR-----LASHTLVSDIVYNPYK 215 (277)
T ss_dssp SCCTT-----CCSSCEEEESCCSSSS
T ss_pred CCHHH-----cCCCCEEEEecCCCCC
Confidence 1 111 2356799999987543
No 193
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=98.47 E-value=7.2e-07 Score=79.85 Aligned_cols=108 Identities=19% Similarity=0.246 Sum_probs=74.0
Q ss_pred CCCCCCeEEEEccchhhHH-HHHHHHhC-CCeE-EEEeCChhHHHHHHhC-CCCCcCCHHHHhh--cCCEEEEeCCCChh
Q 021213 1 MLFFDQSVGFIGLGNMGFR-MASNLMKA-GYKM-AVHDVNCNVMKMFSDM-GVPTKETPFEVAE--ASDVVITMLPSSSH 74 (316)
Q Consensus 1 ~~~~~~~IgiiG~G~mG~~-la~~l~~~-g~~V-~~~~r~~~~~~~l~~~-g~~~~~~~~~~~~--~adivi~~vp~~~~ 74 (316)
|.|.++||||||+|.||.. .+..+.+. +++| .++|+++++.. .+. +....+|.+++++ +.|+|++|+|+..+
T Consensus 1 M~m~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~--~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H 78 (358)
T 3gdo_A 1 MSLDTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVK--RDFPDAEVVHELEEITNDPAIELVIVTTPSGLH 78 (358)
T ss_dssp -CTTCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHH--HHCTTSEEESSTHHHHTCTTCCEEEECSCTTTH
T ss_pred CCCCcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH--hhCCCCceECCHHHHhcCCCCCEEEEcCCcHHH
Confidence 5555679999999999996 67777665 5675 47899987632 233 5667789999997 68999999999876
Q ss_pred hHHHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 75 QVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
.+-+.. .++. +..+++.. -+......+++.+...+.
T Consensus 79 -~~~~~~----al~a----GkhVl~EKPla~~~~e~~~l~~~a~~~ 115 (358)
T 3gdo_A 79 -YEHTMA----CIQA----GKHVVMEKPMTATAEEGETLKRAADEK 115 (358)
T ss_dssp -HHHHHH----HHHT----TCEEEEESSCCSSHHHHHHHHHHHHHH
T ss_pred -HHHHHH----HHHc----CCeEEEecCCcCCHHHHHHHHHHHHHc
Confidence 444432 2221 23455553 245577777777766654
No 194
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.46 E-value=2.1e-07 Score=85.81 Aligned_cols=70 Identities=21% Similarity=0.334 Sum_probs=54.4
Q ss_pred CCCeEEEEccchh--hHHHHHHHHhC----CCeEEEEeCChhHHHHHHh--------CC----CCCcCCHHHHhhcCCEE
Q 021213 4 FDQSVGFIGLGNM--GFRMASNLMKA----GYKMAVHDVNCNVMKMFSD--------MG----VPTKETPFEVAEASDVV 65 (316)
Q Consensus 4 ~~~~IgiiG~G~m--G~~la~~l~~~----g~~V~~~~r~~~~~~~l~~--------~g----~~~~~~~~~~~~~adiv 65 (316)
++|||+|||+|.| |.+++..|++. |++|.+||+++++++...+ .+ +..+++..+++++||+|
T Consensus 2 ~~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~V 81 (480)
T 1obb_A 2 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFV 81 (480)
T ss_dssp CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEE
Confidence 3579999999996 67778888754 8999999999987654322 11 33456788889999999
Q ss_pred EEeCCCCh
Q 021213 66 ITMLPSSS 73 (316)
Q Consensus 66 i~~vp~~~ 73 (316)
|+++|.+.
T Consensus 82 Iiaagv~~ 89 (480)
T 1obb_A 82 INTAMVGG 89 (480)
T ss_dssp EECCCTTH
T ss_pred EECCCccc
Confidence 99998753
No 195
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.46 E-value=1.1e-07 Score=80.71 Aligned_cols=90 Identities=13% Similarity=0.067 Sum_probs=66.6
Q ss_pred eEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHHhC-CCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 7 SVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDM-GVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 7 ~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~~~-g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
+|+|||+|.||.+++..|.+.|. +|++++|++++.+.+.+. +.....+..+.++++|+||.|+|..-. .. ...+.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~--p~-~~~i~ 186 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMK--GE-ELPVS 186 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTT--SC-CCSCC
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCC--CC-CCCCC
Confidence 89999999999999999999998 899999999988877653 222345677888899999999986421 00 01111
Q ss_pred -CcccCCCCCCCeEEEEcCCC
Q 021213 85 -GLLQGGNSVRPQLLIDSSTI 104 (316)
Q Consensus 85 -~~~~~~~~~~~~~vi~~st~ 104 (316)
..+ .++.+++|+...
T Consensus 187 ~~~l-----~~~~~V~Divy~ 202 (253)
T 3u62_A 187 DDSL-----KNLSLVYDVIYF 202 (253)
T ss_dssp HHHH-----TTCSEEEECSSS
T ss_pred HHHh-----CcCCEEEEeeCC
Confidence 112 245688998877
No 196
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.46 E-value=1.8e-07 Score=83.32 Aligned_cols=105 Identities=13% Similarity=0.112 Sum_probs=71.1
Q ss_pred CCeEEEEccchhhHH-HHHHH-Hh-CCCeEE-EEeCChhHHHHHHhC-CCCCcCCHHHHhhc--CCEEEEeCCCChhhHH
Q 021213 5 DQSVGFIGLGNMGFR-MASNL-MK-AGYKMA-VHDVNCNVMKMFSDM-GVPTKETPFEVAEA--SDVVITMLPSSSHQVL 77 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~-la~~l-~~-~g~~V~-~~~r~~~~~~~l~~~-g~~~~~~~~~~~~~--adivi~~vp~~~~~~~ 77 (316)
++||||||+|.||.. .+..+ .. .+++|. ++|+++++.+...+. ++...+|.++++++ .|+|++|+|+..+ .+
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h-~~ 80 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSH-FE 80 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGGH-HH
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHHH-HH
Confidence 579999999999986 44424 33 356766 889998876444443 56778899999876 8999999999876 44
Q ss_pred HHhcCCCCcccCCCCCCCeEEEEcC--CCCHHHHHHHHHHHhhc
Q 021213 78 DVYNGPNGLLQGGNSVRPQLLIDSS--TIDPQTSRNISAAVSNC 119 (316)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~vi~~s--t~~~~~~~~l~~~~~~~ 119 (316)
-+.. .++ .++.|+.-. +..+...+++.+...+.
T Consensus 81 ~~~~----al~-----aGk~Vl~EKP~a~~~~e~~~l~~~a~~~ 115 (345)
T 3f4l_A 81 YAKR----ALE-----AGKNVLVEKPFTPTLAQAKELFALAKSK 115 (345)
T ss_dssp HHHH----HHH-----TTCEEEECSSSCSSHHHHHHHHHHHHHH
T ss_pred HHHH----HHH-----cCCcEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 4332 222 233343333 45677777887776654
No 197
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.45 E-value=3.9e-07 Score=75.68 Aligned_cols=68 Identities=15% Similarity=0.300 Sum_probs=54.4
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh-CCCCC----cCCH---HHH-hhcCCEEEEeCCCCh
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-MGVPT----KETP---FEV-AEASDVVITMLPSSS 73 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~-~g~~~----~~~~---~~~-~~~adivi~~vp~~~ 73 (316)
|||.|+|+|.+|..+++.|.+.|++|+++|+++++++.+.+ .+... .++. .++ ++++|+||++++++.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~ 77 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDE 77 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcH
Confidence 68999999999999999999999999999999999988764 34321 1222 222 468999999998865
No 198
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=98.45 E-value=4.5e-07 Score=81.28 Aligned_cols=108 Identities=13% Similarity=0.156 Sum_probs=73.7
Q ss_pred CCCCCCeEEEEccchhhHH-HHHHHHhC-CCeEE-EEeCChhHHHHHHhC-CCCCcCCHHHHhhc--CCEEEEeCCCChh
Q 021213 1 MLFFDQSVGFIGLGNMGFR-MASNLMKA-GYKMA-VHDVNCNVMKMFSDM-GVPTKETPFEVAEA--SDVVITMLPSSSH 74 (316)
Q Consensus 1 ~~~~~~~IgiiG~G~mG~~-la~~l~~~-g~~V~-~~~r~~~~~~~l~~~-g~~~~~~~~~~~~~--adivi~~vp~~~~ 74 (316)
|+|.++||||||+|.||.. .+..+.+. +.+|. ++|++++++. .+. +....+|.++++++ .|+|++|+|+..+
T Consensus 1 M~~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~--~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H 78 (362)
T 3fhl_A 1 MSLEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSK--ERYPQASIVRSFKELTEDPEIDLIVVNTPDNTH 78 (362)
T ss_dssp --CCCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGG--TTCTTSEEESCSHHHHTCTTCCEEEECSCGGGH
T ss_pred CCCCceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH--HhCCCCceECCHHHHhcCCCCCEEEEeCChHHH
Confidence 6666689999999999997 67777765 56764 7899987632 223 56677899999976 8999999999876
Q ss_pred hHHHHhcCCCCcccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHhhc
Q 021213 75 QVLDVYNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVSNC 119 (316)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~vi~~s-t~~~~~~~~l~~~~~~~ 119 (316)
.+-+.. .++. +..+++..- +......+++.+...+.
T Consensus 79 -~~~~~~----al~a----GkhVl~EKP~a~~~~ea~~l~~~a~~~ 115 (362)
T 3fhl_A 79 -YEYAGM----ALEA----GKNVVVEKPFTSTTKQGEELIALAKKK 115 (362)
T ss_dssp -HHHHHH----HHHT----TCEEEEESSCCSSHHHHHHHHHHHHHH
T ss_pred -HHHHHH----HHHC----CCeEEEecCCCCCHHHHHHHHHHHHHc
Confidence 443332 2221 234555532 45577777777766654
No 199
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.43 E-value=6.6e-07 Score=78.63 Aligned_cols=69 Identities=14% Similarity=0.132 Sum_probs=48.5
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCC--eEEEEeCChhHHH----HHHhC-----CCCCcCCHHHHhhcCCEEEEeCCCC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMK----MFSDM-----GVPTKETPFEVAEASDVVITMLPSS 72 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~--~V~~~~r~~~~~~----~l~~~-----g~~~~~~~~~~~~~adivi~~vp~~ 72 (316)
.+|||+|||+|.+|.+++..|+..|+ +|.++|+++++++ .+.+. ..+...+..+++++||+||++.+.+
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p 85 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGAN 85 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 35799999999999999999999987 9999999987543 23221 1112223466789999999998764
No 200
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.43 E-value=3.7e-07 Score=70.16 Aligned_cols=68 Identities=18% Similarity=0.321 Sum_probs=51.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCc----CCHHH---H-hhcCCEEEEeCCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTK----ETPFE---V-AEASDVVITMLPSS 72 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~----~~~~~---~-~~~adivi~~vp~~ 72 (316)
+++|.|+|+|.+|..++..|.+.|++|+++++++++.+.+.+.+.... .+.+. + ++++|+||.|++.+
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN 81 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence 357999999999999999999999999999999988776665543211 12222 1 45688888888765
No 201
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=98.43 E-value=9.1e-07 Score=81.52 Aligned_cols=108 Identities=12% Similarity=0.092 Sum_probs=75.3
Q ss_pred CCCCeEEEEccchhhHHHHHHHHhC-CCeE-EEEeCChhHHHHHHh----CC---CCCcC----CHHHHhh--cCCEEEE
Q 021213 3 FFDQSVGFIGLGNMGFRMASNLMKA-GYKM-AVHDVNCNVMKMFSD----MG---VPTKE----TPFEVAE--ASDVVIT 67 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~~la~~l~~~-g~~V-~~~~r~~~~~~~l~~----~g---~~~~~----~~~~~~~--~adivi~ 67 (316)
|.++||||||+|.||...+..|.+. +.+| .++|+++++++.+.+ .| ....+ |.+++++ +.|+|++
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i 97 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFV 97 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEE
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEE
Confidence 3457999999999999999998875 5665 588999998877654 35 34566 8999987 5899999
Q ss_pred eCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 68 MLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 68 ~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
|+|+..+ .+-++. .++. +..+++.. .+......+++.+...+.
T Consensus 98 ~tp~~~h-~~~~~~----al~a----GkhV~~EKP~a~~~~ea~~l~~~a~~~ 141 (444)
T 2ixa_A 98 SSPWEWH-HEHGVA----AMKA----GKIVGMEVSGAITLEECWDYVKVSEQT 141 (444)
T ss_dssp CCCGGGH-HHHHHH----HHHT----TCEEEECCCCCSSHHHHHHHHHHHHHH
T ss_pred cCCcHHH-HHHHHH----HHHC----CCeEEEeCCCcCCHHHHHHHHHHHHHh
Confidence 9998876 444433 2221 22355543 344566777777766554
No 202
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=98.43 E-value=4.7e-07 Score=83.30 Aligned_cols=110 Identities=16% Similarity=0.149 Sum_probs=78.3
Q ss_pred CCeEEEEcc----chhhHHHHHHHHhC--CCeE-EEEeCChhHHHHHHh-CCCC---CcCCHHHHhh--cCCEEEEeCCC
Q 021213 5 DQSVGFIGL----GNMGFRMASNLMKA--GYKM-AVHDVNCNVMKMFSD-MGVP---TKETPFEVAE--ASDVVITMLPS 71 (316)
Q Consensus 5 ~~~IgiiG~----G~mG~~la~~l~~~--g~~V-~~~~r~~~~~~~l~~-~g~~---~~~~~~~~~~--~adivi~~vp~ 71 (316)
++||||||+ |.||..++..|.+. +++| .++|+++++.+.+.+ .|+. ..+|.+++++ +.|+|++|+|+
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 99 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQV 99 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSCH
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCCc
Confidence 479999999 99999999999986 5675 588999998877765 4654 6789999986 58999999998
Q ss_pred ChhhHHHHhcCCCCcccCC--CCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 72 SSHQVLDVYNGPNGLLQGG--NSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 72 ~~~~~~~v~~~~~~~~~~~--~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
..+ .+-+... ++.. .....++++.. .+......+++.+...+.
T Consensus 100 ~~H-~~~~~~a----l~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~ 145 (438)
T 3btv_A 100 ASH-YEVVMPL----LEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAER 145 (438)
T ss_dssp HHH-HHHHHHH----HHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTT
T ss_pred HHH-HHHHHHH----HHCCCCcccceeEEecCcccCCHHHHHHHHHHHHHc
Confidence 766 4444322 2110 00003466663 455677777887776654
No 203
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.42 E-value=9.7e-07 Score=79.73 Aligned_cols=92 Identities=18% Similarity=0.174 Sum_probs=70.3
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhH-HHHhcC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQV-LDVYNG 82 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~-~~v~~~ 82 (316)
..++++|+|+|.+|..+|+.+...|.+|+++++++.+.......|... .+.+++++.+|+|++++++..- + ++.+..
T Consensus 246 ~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~v-v~LeElL~~ADIVv~atgt~~l-I~~e~l~~ 323 (464)
T 3n58_A 246 AGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEV-VTLDDAASTADIVVTTTGNKDV-ITIDHMRK 323 (464)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE-CCHHHHGGGCSEEEECCSSSSS-BCHHHHHH
T ss_pred cCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCcee-ccHHHHHhhCCEEEECCCCccc-cCHHHHhc
Confidence 347899999999999999999999999999999987655555566654 4789999999999998764321 1 222221
Q ss_pred CCCcccCCCCCCCeEEEEcCCCCH
Q 021213 83 PNGLLQGGNSVRPQLLIDSSTIDP 106 (316)
Q Consensus 83 ~~~~~~~~~~~~~~~vi~~st~~~ 106 (316)
+.++.++||++....
T Consensus 324 ---------MK~GAILINvGRgdv 338 (464)
T 3n58_A 324 ---------MKDMCIVGNIGHFDN 338 (464)
T ss_dssp ---------SCTTEEEEECSSSTT
T ss_pred ---------CCCCeEEEEcCCCCc
Confidence 346789999987653
No 204
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.42 E-value=2.7e-07 Score=81.33 Aligned_cols=73 Identities=15% Similarity=0.194 Sum_probs=55.2
Q ss_pred CCCeEEEEccchhhHHHHHHHHhC-CCe-EEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHh
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKA-GYK-MAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVY 80 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~-g~~-V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~ 80 (316)
+++||+|||+|+||..+++.+.+. +.+ |.++|+++++ .+. .|+...++.++++.++|+||+|+|...+ .+.+.
T Consensus 2 ~~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~--~~~-~gv~~~~d~~~ll~~~DvViiatp~~~h-~~~~~ 76 (320)
T 1f06_A 2 TNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL--DTK-TPVFDVADVDKHADDVDVLFLCMGSATD-IPEQA 76 (320)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC--SSS-SCEEEGGGGGGTTTTCSEEEECSCTTTH-HHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH--hhc-CCCceeCCHHHHhcCCCEEEEcCCcHHH-HHHHH
Confidence 457999999999999999999887 456 4578998655 222 4555556777777789999999998755 44444
No 205
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=98.41 E-value=1.8e-06 Score=78.83 Aligned_cols=106 Identities=14% Similarity=0.179 Sum_probs=75.8
Q ss_pred CCeEEEEccch---hhHHHHHHHHhCC-CeEE--EEeCChhHHHHHHh-CCC---CCcCCHHHHhhc-------CCEEEE
Q 021213 5 DQSVGFIGLGN---MGFRMASNLMKAG-YKMA--VHDVNCNVMKMFSD-MGV---PTKETPFEVAEA-------SDVVIT 67 (316)
Q Consensus 5 ~~~IgiiG~G~---mG~~la~~l~~~g-~~V~--~~~r~~~~~~~l~~-~g~---~~~~~~~~~~~~-------adivi~ 67 (316)
++||||||+|. ||...+..+...+ +++. ++|+++++.+.+.+ .|+ ...+|.++++++ .|+|++
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I 116 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAI 116 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEE
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEE
Confidence 46899999999 9999988888776 5765 67999999887765 476 577899999876 899999
Q ss_pred eCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 68 MLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 68 ~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
|+|+..+ .+-+.. .++ .+..+++.. -+......+++.+...+.
T Consensus 117 ~tp~~~H-~~~~~~----al~----aGkhVl~EKPla~~~~ea~~l~~~a~~~ 160 (417)
T 3v5n_A 117 VTPNHVH-YAAAKE----FLK----RGIHVICDKPLTSTLADAKKLKKAADES 160 (417)
T ss_dssp CSCTTSH-HHHHHH----HHT----TTCEEEEESSSCSSHHHHHHHHHHHHHC
T ss_pred CCCcHHH-HHHHHH----HHh----CCCeEEEECCCcCCHHHHHHHHHHHHHc
Confidence 9999876 443332 222 123455553 244577777777776654
No 206
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=98.41 E-value=9.9e-07 Score=79.80 Aligned_cols=107 Identities=21% Similarity=0.288 Sum_probs=76.8
Q ss_pred CCCeEEEEccc-hhhHHHHHHHHhC-CCeEE-EEeCChhHHHHHHh-CCCCCcCCHHHHhhc--CCEEEEeCCCChhhHH
Q 021213 4 FDQSVGFIGLG-NMGFRMASNLMKA-GYKMA-VHDVNCNVMKMFSD-MGVPTKETPFEVAEA--SDVVITMLPSSSHQVL 77 (316)
Q Consensus 4 ~~~~IgiiG~G-~mG~~la~~l~~~-g~~V~-~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~--adivi~~vp~~~~~~~ 77 (316)
|++||||||+| .||..++..|.+. +.++. ++|+++++.+.+.+ .|+...+|.++++++ .|+|++|+|+..+ .+
T Consensus 1 ~~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~~H-~~ 79 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQFH-CE 79 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGGGH-HH
T ss_pred CceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcHHH-HH
Confidence 35799999999 9999999999876 45654 78999998877655 588888999999874 9999999998876 43
Q ss_pred HHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 78 DVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
-+.. .++. +.++++.. .+......+++.+...+.
T Consensus 80 ~~~~----al~a----Gk~Vl~EKP~a~~~~e~~~l~~~a~~~ 114 (387)
T 3moi_A 80 HVVQ----ASEQ----GLHIIVEKPLTLSRDEADRMIEAVERA 114 (387)
T ss_dssp HHHH----HHHT----TCEEEECSCCCSCHHHHHHHHHHHHHH
T ss_pred HHHH----HHHC----CCceeeeCCccCCHHHHHHHHHHHHHh
Confidence 3332 2221 22344443 244567777777766654
No 207
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=98.40 E-value=9.6e-07 Score=80.21 Aligned_cols=107 Identities=12% Similarity=0.199 Sum_probs=76.8
Q ss_pred CCCeEEEEccch---hhHHHHHHHHhCC-CeEE--EEeCChhHHHHHHh-CCC---CCcCCHHHHhhc-------CCEEE
Q 021213 4 FDQSVGFIGLGN---MGFRMASNLMKAG-YKMA--VHDVNCNVMKMFSD-MGV---PTKETPFEVAEA-------SDVVI 66 (316)
Q Consensus 4 ~~~~IgiiG~G~---mG~~la~~l~~~g-~~V~--~~~r~~~~~~~l~~-~g~---~~~~~~~~~~~~-------adivi 66 (316)
.++||||||+|. ||...+..+...+ +++. ++|+++++.+.+.+ .|+ ...+|.++++++ .|+|+
T Consensus 11 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~ 90 (398)
T 3dty_A 11 QPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVS 90 (398)
T ss_dssp SCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEE
T ss_pred CcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEE
Confidence 346899999999 9999998887765 6765 57999999887765 677 578899999875 89999
Q ss_pred EeCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 67 TMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 67 ~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
+|+|+..+ .+-+.. .++. +..+++.. .+......+++.+...+.
T Consensus 91 i~tp~~~H-~~~~~~----al~a----GkhVl~EKPla~~~~ea~~l~~~a~~~ 135 (398)
T 3dty_A 91 IATPNGTH-YSITKA----ALEA----GLHVVCEKPLCFTVEQAENLRELSHKH 135 (398)
T ss_dssp EESCGGGH-HHHHHH----HHHT----TCEEEECSCSCSCHHHHHHHHHHHHHT
T ss_pred ECCCcHHH-HHHHHH----HHHC----CCeEEEeCCCcCCHHHHHHHHHHHHHc
Confidence 99999876 443332 2221 22344432 244567777777776654
No 208
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.40 E-value=7e-07 Score=78.19 Aligned_cols=71 Identities=21% Similarity=0.206 Sum_probs=51.4
Q ss_pred CCCCCCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCC--hhHHHH----HHh------CCCCCc-CCHHHHhhcCCEEE
Q 021213 1 MLFFDQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVN--CNVMKM----FSD------MGVPTK-ETPFEVAEASDVVI 66 (316)
Q Consensus 1 ~~~~~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~--~~~~~~----l~~------~g~~~~-~~~~~~~~~adivi 66 (316)
|+|..+||+|||+|.||.+++..|+..|+ +|.+||++ +++.+. +.+ ...+.. ++..+.+++||+||
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVI 83 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVV 83 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEE
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEE
Confidence 44445799999999999999999999999 99999999 443321 111 122222 23356789999999
Q ss_pred EeCCC
Q 021213 67 TMLPS 71 (316)
Q Consensus 67 ~~vp~ 71 (316)
++...
T Consensus 84 iaag~ 88 (315)
T 3tl2_A 84 ITAGI 88 (315)
T ss_dssp ECCSC
T ss_pred EeCCC
Confidence 98643
No 209
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=98.40 E-value=1.8e-06 Score=77.34 Aligned_cols=107 Identities=15% Similarity=0.190 Sum_probs=75.3
Q ss_pred CCCeEEEEccchhhH-HHHHHHHhCCCeE-EEEeCChhHHHHHHh-CC-CCCcCCHHHHhhc--CCEEEEeCCCChhhHH
Q 021213 4 FDQSVGFIGLGNMGF-RMASNLMKAGYKM-AVHDVNCNVMKMFSD-MG-VPTKETPFEVAEA--SDVVITMLPSSSHQVL 77 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~-~la~~l~~~g~~V-~~~~r~~~~~~~l~~-~g-~~~~~~~~~~~~~--adivi~~vp~~~~~~~ 77 (316)
.++||||||+|.+|. .++..+...+.+| .++|+++++++.+.+ .| ....+|.++++++ .|+|++|+|+..+ .+
T Consensus 25 ~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H-~~ 103 (361)
T 3u3x_A 25 DELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSSER-AE 103 (361)
T ss_dssp -CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCHHHH-HH
T ss_pred cCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChHHH-HH
Confidence 357999999999994 5777777788885 478999999888765 44 5678899999975 8999999998766 33
Q ss_pred HHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 78 DVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
-+.. .++. +..+++.- -+......+++.+...+.
T Consensus 104 ~~~~----al~a----GkhVl~EKPla~~~~ea~~l~~~a~~~ 138 (361)
T 3u3x_A 104 LAIR----AMQH----GKDVLVDKPGMTSFDQLAKLRRVQAET 138 (361)
T ss_dssp HHHH----HHHT----TCEEEEESCSCSSHHHHHHHHHHHHTT
T ss_pred HHHH----HHHC----CCeEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 3332 2221 23355543 244566777777766553
No 210
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.39 E-value=3e-07 Score=79.70 Aligned_cols=65 Identities=14% Similarity=0.265 Sum_probs=51.3
Q ss_pred CeEEEEccchhhHHHHHHHHhCCC--eEEEEeCChhHHHH----HHh----C--C--CCCcCCHHHHhhcCCEEEEeCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKM----FSD----M--G--VPTKETPFEVAEASDVVITMLPS 71 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~--~V~~~~r~~~~~~~----l~~----~--g--~~~~~~~~~~~~~adivi~~vp~ 71 (316)
|||+|||+|.||.+++..|+..|+ +|.+||+++++++. +.+ . . +..+++ .+++++||+||++.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 699999999999999999999998 99999999987641 221 1 1 223345 7889999999998644
No 211
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.39 E-value=1.3e-06 Score=78.71 Aligned_cols=92 Identities=16% Similarity=0.113 Sum_probs=69.3
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHH-HHhcC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVL-DVYNG 82 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~-~v~~~ 82 (316)
..++|+|+|+|.+|..+|+.+...|.+|+++|+++.+.......|.. ..+.+++++.+|+|++|..+..- +. +.+..
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~-v~~Leeal~~ADIVi~atgt~~l-I~~e~l~~ 296 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFR-LVKLNEVIRQVDIVITCTGNKNV-VTREHLDR 296 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCHHHHTTTCSEEEECSSCSCS-BCHHHHHH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCE-eccHHHHHhcCCEEEECCCCccc-CCHHHHHh
Confidence 34789999999999999999999999999999998766555556654 35789999999999998432221 11 22221
Q ss_pred CCCcccCCCCCCCeEEEEcCCCCH
Q 021213 83 PNGLLQGGNSVRPQLLIDSSTIDP 106 (316)
Q Consensus 83 ~~~~~~~~~~~~~~~vi~~st~~~ 106 (316)
+.++.+++|++...+
T Consensus 297 ---------MK~gailINvgrg~~ 311 (435)
T 3gvp_A 297 ---------MKNSCIVCNMGHSNT 311 (435)
T ss_dssp ---------SCTTEEEEECSSTTT
T ss_pred ---------cCCCcEEEEecCCCc
Confidence 346779999987764
No 212
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.39 E-value=5.7e-07 Score=79.01 Aligned_cols=67 Identities=16% Similarity=0.181 Sum_probs=52.3
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHH----HHHh------CCCCC--cCCHHHHhhcCCEEEEeCC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMK----MFSD------MGVPT--KETPFEVAEASDVVITMLP 70 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~----~l~~------~g~~~--~~~~~~~~~~adivi~~vp 70 (316)
..+||+|||+|.||.+++..|+..|+ +|.+||+++++++ .+.+ ..... +++. +++++||+||++.+
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaag 84 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTAG 84 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECCS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEccC
Confidence 35799999999999999999999999 9999999988653 2222 12332 3454 78899999999864
Q ss_pred C
Q 021213 71 S 71 (316)
Q Consensus 71 ~ 71 (316)
.
T Consensus 85 ~ 85 (324)
T 3gvi_A 85 V 85 (324)
T ss_dssp C
T ss_pred c
Confidence 3
No 213
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=98.37 E-value=1.6e-06 Score=78.03 Aligned_cols=68 Identities=19% Similarity=0.220 Sum_probs=56.3
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh-CCCCC------cCCHHHHhhcCCEEEEeCCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-MGVPT------KETPFEVAEASDVVITMLPSS 72 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~-~g~~~------~~~~~~~~~~adivi~~vp~~ 72 (316)
.++|+|+|+|.+|..+++.+...|.+|++|||++++.+.+.+ .|... ..+..+.++.+|+||.|++.+
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p 242 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVP 242 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcC
Confidence 478999999999999999999999999999999998877766 45442 234567778999999988543
No 214
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=98.37 E-value=1.2e-06 Score=81.34 Aligned_cols=106 Identities=13% Similarity=0.157 Sum_probs=78.2
Q ss_pred CCeEEEEcc----chhhHHHHHHHHhC--CCeE-EEEeCChhHHHHHHh-CCCC---CcCCHHHHhh--cCCEEEEeCCC
Q 021213 5 DQSVGFIGL----GNMGFRMASNLMKA--GYKM-AVHDVNCNVMKMFSD-MGVP---TKETPFEVAE--ASDVVITMLPS 71 (316)
Q Consensus 5 ~~~IgiiG~----G~mG~~la~~l~~~--g~~V-~~~~r~~~~~~~l~~-~g~~---~~~~~~~~~~--~adivi~~vp~ 71 (316)
++||||||+ |.||...+..|.+. +.+| .++|+++++.+.+.+ .|+. ..+|.+++++ +.|+|++|+|+
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp~ 118 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVKV 118 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSCH
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCCc
Confidence 468999999 99999999999986 6675 488999998887765 4664 6789999986 68999999998
Q ss_pred ChhhHHHHhcCCCCcccCCCCCC------CeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 72 SSHQVLDVYNGPNGLLQGGNSVR------PQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 72 ~~~~~~~v~~~~~~~~~~~~~~~------~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
..+ .+-+.. .++. + ..++++. .+..+...+++.+...+.
T Consensus 119 ~~H-~~~~~~----al~a----G~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~ 164 (479)
T 2nvw_A 119 PEH-YEVVKN----ILEH----SSQNLNLRYLYVEWALAASVQQAEELYSISQQR 164 (479)
T ss_dssp HHH-HHHHHH----HHHH----SSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTC
T ss_pred HHH-HHHHHH----HHHC----CCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHc
Confidence 776 444432 2221 2 3467665 455677777777766553
No 215
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.36 E-value=8.4e-07 Score=77.92 Aligned_cols=69 Identities=17% Similarity=0.266 Sum_probs=52.8
Q ss_pred CCCCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHH----HHHhC------CCCCc-CCHHHHhhcCCEEEEeCC
Q 021213 3 FFDQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMK----MFSDM------GVPTK-ETPFEVAEASDVVITMLP 70 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~----~l~~~------g~~~~-~~~~~~~~~adivi~~vp 70 (316)
|..|||+|||+|.||.+++..|+..|+ +|.+||+++++++ .+.+. ..... ++..+++++||+||++.+
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag 82 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAG 82 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCC
Confidence 445799999999999999999999988 9999999988754 23321 23332 233578899999999864
Q ss_pred C
Q 021213 71 S 71 (316)
Q Consensus 71 ~ 71 (316)
.
T Consensus 83 ~ 83 (321)
T 3p7m_A 83 V 83 (321)
T ss_dssp C
T ss_pred c
Confidence 3
No 216
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.33 E-value=2.4e-06 Score=75.06 Aligned_cols=70 Identities=19% Similarity=0.302 Sum_probs=52.8
Q ss_pred CCCCeEEEEccchhhHHHHHHHHhCC--CeEEEEeCChhHHHH----HHh------CCCCCcCCHHHHhhcCCEEEEeCC
Q 021213 3 FFDQSVGFIGLGNMGFRMASNLMKAG--YKMAVHDVNCNVMKM----FSD------MGVPTKETPFEVAEASDVVITMLP 70 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~~la~~l~~~g--~~V~~~~r~~~~~~~----l~~------~g~~~~~~~~~~~~~adivi~~vp 70 (316)
|++|||+|||+|.+|.+++..|+..| .+|.++|+++++++. +.+ .......+..+++++||+||++.+
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag 83 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAG 83 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCC
Confidence 34579999999999999999999888 489999999876543 222 122233355778899999999875
Q ss_pred CC
Q 021213 71 SS 72 (316)
Q Consensus 71 ~~ 72 (316)
.+
T Consensus 84 ~~ 85 (317)
T 3d0o_A 84 AA 85 (317)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 217
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.32 E-value=1.8e-07 Score=72.05 Aligned_cols=99 Identities=16% Similarity=0.262 Sum_probs=68.2
Q ss_pred CCeEEEEcc----chhhHHHHHHHHhCCCeEEEEeCChhHH-HHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHH
Q 021213 5 DQSVGFIGL----GNMGFRMASNLMKAGYKMAVHDVNCNVM-KMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDV 79 (316)
Q Consensus 5 ~~~IgiiG~----G~mG~~la~~l~~~g~~V~~~~r~~~~~-~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v 79 (316)
..+|+|||+ |.+|..++++|.+.||+ +|++|+.+. +.+ .|.....|+.|+.+..|++++++|... +.++
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~--v~~vnp~~~~~~i--~G~~~~~sl~el~~~vDlavi~vp~~~--~~~v 86 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGEEL--FGEEAVASLLDLKEPVDILDVFRPPSA--LMDH 86 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTSEE--TTEECBSSGGGCCSCCSEEEECSCHHH--HTTT
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCE--EEEeCCCcccCcC--CCEEecCCHHHCCCCCCEEEEEeCHHH--HHHH
Confidence 568999999 89999999999999997 677777642 211 477777889998888999999999743 5666
Q ss_pred hcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 80 YNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
+.+. .+. - -+.+++..++.. +++.+...+.
T Consensus 87 ~~~~---~~~--g-i~~i~~~~g~~~----~~~~~~a~~~ 116 (140)
T 1iuk_A 87 LPEV---LAL--R-PGLVWLQSGIRH----PEFEKALKEA 116 (140)
T ss_dssp HHHH---HHH--C-CSCEEECTTCCC----HHHHHHHHHT
T ss_pred HHHH---HHc--C-CCEEEEcCCcCH----HHHHHHHHHc
Confidence 6432 211 1 123665544432 4555555543
No 218
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.31 E-value=8.5e-07 Score=81.39 Aligned_cols=69 Identities=14% Similarity=0.180 Sum_probs=53.9
Q ss_pred CCeEEEEccchh-hHHHHHHHHhC-----CCeEEEEeCCh--hHHHHHH--------hCC----CCCcCCHHHHhhcCCE
Q 021213 5 DQSVGFIGLGNM-GFRMASNLMKA-----GYKMAVHDVNC--NVMKMFS--------DMG----VPTKETPFEVAEASDV 64 (316)
Q Consensus 5 ~~~IgiiG~G~m-G~~la~~l~~~-----g~~V~~~~r~~--~~~~~l~--------~~g----~~~~~~~~~~~~~adi 64 (316)
+|||+|||+|.+ |.+++..|++. +++|.+||+++ ++++... ..+ +..+++..+++++||+
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD~ 86 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF 86 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCCE
Confidence 579999999999 88888888874 67899999999 7654421 112 3335677889999999
Q ss_pred EEEeCCCCh
Q 021213 65 VITMLPSSS 73 (316)
Q Consensus 65 vi~~vp~~~ 73 (316)
||+++|.+.
T Consensus 87 VVitagv~~ 95 (450)
T 1s6y_A 87 VTTQFRVGG 95 (450)
T ss_dssp EEECCCTTH
T ss_pred EEEcCCCCC
Confidence 999998653
No 219
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=98.30 E-value=1e-06 Score=78.49 Aligned_cols=105 Identities=13% Similarity=0.181 Sum_probs=70.0
Q ss_pred CCCeEEEEccchhhH-HHHHHHHhC-CCeEE-EEeCChhHHHHHHh----CCCCCcCCHHHHhhc--CCEEEEeCCCChh
Q 021213 4 FDQSVGFIGLGNMGF-RMASNLMKA-GYKMA-VHDVNCNVMKMFSD----MGVPTKETPFEVAEA--SDVVITMLPSSSH 74 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~-~la~~l~~~-g~~V~-~~~r~~~~~~~l~~----~g~~~~~~~~~~~~~--adivi~~vp~~~~ 74 (316)
|++||||||+|.||. ..+..+.+. +++|. ++|++ +.+.+.+ .++...+|.++++++ .|+|++|+|+..+
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 78 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH--VNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAHTH 78 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT--CCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGGGH
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC--HHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcHHH
Confidence 357999999999998 566666654 56764 78887 3333332 466778899999975 8999999999876
Q ss_pred hHHHHhcCCCCcccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHhhc
Q 021213 75 QVLDVYNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVSNC 119 (316)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~vi~~s-t~~~~~~~~l~~~~~~~ 119 (316)
.+-+.. .++. +..++++.- +..+...+++.+...+.
T Consensus 79 -~~~~~~----al~a----Gk~Vl~EKP~a~~~~e~~~l~~~a~~~ 115 (349)
T 3i23_A 79 -YDLAKQ----AILA----GKSVIVEKPFCDTLEHAEELFALGQEK 115 (349)
T ss_dssp -HHHHHH----HHHT----TCEEEECSCSCSSHHHHHHHHHHHHHT
T ss_pred -HHHHHH----HHHc----CCEEEEECCCcCCHHHHHHHHHHHHHc
Confidence 443332 2221 223555432 34577777777766654
No 220
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.28 E-value=2.7e-06 Score=75.82 Aligned_cols=105 Identities=15% Similarity=0.205 Sum_probs=70.9
Q ss_pred CeEEEEccchhhHH-HHHHHHhC-CCeEE-EEeCChhHHHHHHh-CCCC-CcCCHHHHhh--cCCEEEEeCCCChhhHHH
Q 021213 6 QSVGFIGLGNMGFR-MASNLMKA-GYKMA-VHDVNCNVMKMFSD-MGVP-TKETPFEVAE--ASDVVITMLPSSSHQVLD 78 (316)
Q Consensus 6 ~~IgiiG~G~mG~~-la~~l~~~-g~~V~-~~~r~~~~~~~l~~-~g~~-~~~~~~~~~~--~adivi~~vp~~~~~~~~ 78 (316)
+||||||+|.||.. ++..+.+. +.+|. ++|+++++++.+.+ .|+. ..+|.+++++ +.|+|++|+|+..+ .+-
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~~H-~~~ 102 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTSQH-IEW 102 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGGGH-HHH
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCchh-HHH
Confidence 59999999999975 56677665 45655 78999999888766 4664 6789999986 47999999999876 443
Q ss_pred HhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 79 VYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
+... ++. +..+++.- -+......+++.+...+.
T Consensus 103 ~~~a----l~a----GkhVl~EKPla~~~~ea~~l~~~a~~~ 136 (350)
T 4had_A 103 SIKA----ADA----GKHVVCEKPLALKAGDIDAVIAARDRN 136 (350)
T ss_dssp HHHH----HHT----TCEEEECSCCCSSGGGGHHHHHHHHHH
T ss_pred HHHH----Hhc----CCEEEEeCCcccchhhHHHHHHHHHHc
Confidence 3321 211 22344432 223355566776666554
No 221
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.27 E-value=9.1e-07 Score=79.40 Aligned_cols=68 Identities=25% Similarity=0.369 Sum_probs=54.1
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCC----CCC--cCCHHHHhhcCCEEEEeCCCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMG----VPT--KETPFEVAEASDVVITMLPSSS 73 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g----~~~--~~~~~~~~~~adivi~~vp~~~ 73 (316)
+|||.|+|+|.+|..++..|.+ .++|++++++.++++.+.+.. +.. ..++.++++++|+||.|+|...
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~ 89 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFL 89 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGG
T ss_pred ccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCcc
Confidence 4899999999999999999876 589999999999988876542 222 1234566789999999999754
No 222
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.27 E-value=2.9e-06 Score=76.91 Aligned_cols=64 Identities=22% Similarity=0.225 Sum_probs=54.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcC---------------------------CHHH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKE---------------------------TPFE 57 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~---------------------------~~~~ 57 (316)
..+|+|||+|.+|...++.+...|.+|+++|+++++.+.+.+.|..... +..+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e 251 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAA 251 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999988877777755332 2556
Q ss_pred HhhcCCEEEEe
Q 021213 58 VAEASDVVITM 68 (316)
Q Consensus 58 ~~~~adivi~~ 68 (316)
.++.+|+||.|
T Consensus 252 ~~~~aDvVI~~ 262 (401)
T 1x13_A 252 QAKEVDIIVTT 262 (401)
T ss_dssp HHHHCSEEEEC
T ss_pred HhCCCCEEEEC
Confidence 77789999999
No 223
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.26 E-value=1.3e-06 Score=77.85 Aligned_cols=67 Identities=22% Similarity=0.275 Sum_probs=54.3
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC-CCCCcCCHHHHhh-cCCEEEEeCCC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-GVPTKETPFEVAE-ASDVVITMLPS 71 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~-g~~~~~~~~~~~~-~adivi~~vp~ 71 (316)
..++|+|+|+|+||..+|+.|.+.|++|+++|+++++++.+.+. +.... +.++++. +||+++.|...
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v-~~~~ll~~~~DIvip~a~~ 240 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-APNAIYGVTCDIFAPCALG 240 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CGGGTTTCCCSEEEECSCS
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE-ChHHHhccCCcEeeccchH
Confidence 45789999999999999999999999999999999988876653 55443 4455554 89999998543
No 224
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=98.23 E-value=7e-07 Score=80.08 Aligned_cols=106 Identities=14% Similarity=0.253 Sum_probs=72.6
Q ss_pred CCeEEEEccchhhHHHHHHHHhC--CCeEE-EEeCChhHHHHHHh-CCCCCcCCHHHHhhcCCEEEEeCCCChhhH---H
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKA--GYKMA-VHDVNCNVMKMFSD-MGVPTKETPFEVAEASDVVITMLPSSSHQV---L 77 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~--g~~V~-~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~adivi~~vp~~~~~~---~ 77 (316)
+.||+|||+| ||...+..+.+. ++++. ++||++++.+.+.+ .|+...+|.++++++.|++++|+|+..+ . .
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~~h-~~~~~ 84 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRSTVA-GGAGT 84 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--CT-TSHHH
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCccc-chhHH
Confidence 3689999999 899888888765 46755 78999999887765 6888889999999999999999998642 1 1
Q ss_pred HHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhch
Q 021213 78 DVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCI 120 (316)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~ 120 (316)
++.. ..++ .|+-|+.-.-..+...+++.+...+.+
T Consensus 85 ~~a~---~al~-----aGkhVl~EKPl~~~ea~~l~~~A~~~g 119 (372)
T 4gmf_A 85 QLAR---HFLA-----RGVHVIQEHPLHPDDISSLQTLAQEQG 119 (372)
T ss_dssp HHHH---HHHH-----TTCEEEEESCCCHHHHHHHHHHHHHHT
T ss_pred HHHH---HHHH-----cCCcEEEecCCCHHHHHHHHHHHHHcC
Confidence 1111 1121 222333333345677777777766654
No 225
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.23 E-value=3e-06 Score=66.13 Aligned_cols=71 Identities=7% Similarity=0.065 Sum_probs=51.4
Q ss_pred CCCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCCh-hHHHHHH---hCCCCC----cCCH---HHH-hhcCCEEEEeCC
Q 021213 3 FFDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC-NVMKMFS---DMGVPT----KETP---FEV-AEASDVVITMLP 70 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~-~~~~~l~---~~g~~~----~~~~---~~~-~~~adivi~~vp 70 (316)
|..++|.|+|+|.+|..+++.|.+.|++|+++++++ ++.+.+. ..|... .+++ .++ ++++|+||++++
T Consensus 1 ~~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 1 HRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence 345789999999999999999999999999999984 5554443 233221 1122 233 567899999988
Q ss_pred CCh
Q 021213 71 SSS 73 (316)
Q Consensus 71 ~~~ 73 (316)
++.
T Consensus 81 ~d~ 83 (153)
T 1id1_A 81 NDA 83 (153)
T ss_dssp CHH
T ss_pred ChH
Confidence 764
No 226
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=98.23 E-value=6.9e-06 Score=72.88 Aligned_cols=106 Identities=16% Similarity=0.192 Sum_probs=75.4
Q ss_pred CCeEEEEccc-hhhHHHHHHHHhC--CCeE-EEEeCChhHHHHHHh-CCC-CCcCCHHHHhh--cCCEEEEeCCCChhhH
Q 021213 5 DQSVGFIGLG-NMGFRMASNLMKA--GYKM-AVHDVNCNVMKMFSD-MGV-PTKETPFEVAE--ASDVVITMLPSSSHQV 76 (316)
Q Consensus 5 ~~~IgiiG~G-~mG~~la~~l~~~--g~~V-~~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~adivi~~vp~~~~~~ 76 (316)
++||||||+| .+|...+..|.+. +.++ .++|+++++.+.+.+ .|+ ...+|.+++++ +.|+|++|+|+..+ .
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H-~ 96 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVELN-L 96 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGGGH-H
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCchHH-H
Confidence 3689999999 8999999999876 4565 588999999887765 465 56789999986 58999999998775 3
Q ss_pred HHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 77 LDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
+-+.. .++. +..+++.. .+......+++.+...+.
T Consensus 97 ~~~~~----al~a----GkhVl~EKPla~~~~ea~~l~~~a~~~ 132 (340)
T 1zh8_A 97 PFIEK----ALRK----GVHVICEKPISTDVETGKKVVELSEKS 132 (340)
T ss_dssp HHHHH----HHHT----TCEEEEESSSSSSHHHHHHHHHHHHHC
T ss_pred HHHHH----HHHC----CCcEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 33332 2221 22355553 234566777777766553
No 227
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.22 E-value=1.8e-06 Score=75.28 Aligned_cols=63 Identities=16% Similarity=0.242 Sum_probs=48.0
Q ss_pred CeEEEEccchhhHHHHHHHHhCCC--eEEEEeCChhH---HHHHHh---CCCCCcCCHHHHhhcCCEEEEeC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNV---MKMFSD---MGVPTKETPFEVAEASDVVITML 69 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~--~V~~~~r~~~~---~~~l~~---~g~~~~~~~~~~~~~adivi~~v 69 (316)
+||+|||+|.||..++..++..|+ +|.++|++++. ...+.. ..+..+.+. +.+++||+||++.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aa 85 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTV 85 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcC
Confidence 689999999999999999999998 99999998742 222222 123444666 7789999999986
No 228
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=98.21 E-value=5.2e-06 Score=74.89 Aligned_cols=110 Identities=5% Similarity=0.056 Sum_probs=74.3
Q ss_pred CCCCCCeEEEEc-cchhhHH-HH----HHHHhCCC-eE----------EEEeCChhHHHHHHh-CCCC-CcCCHHHHhhc
Q 021213 1 MLFFDQSVGFIG-LGNMGFR-MA----SNLMKAGY-KM----------AVHDVNCNVMKMFSD-MGVP-TKETPFEVAEA 61 (316)
Q Consensus 1 ~~~~~~~IgiiG-~G~mG~~-la----~~l~~~g~-~V----------~~~~r~~~~~~~l~~-~g~~-~~~~~~~~~~~ 61 (316)
|.+.++|||||| +|.||.. .+ ..+.+.+. .+ .++|+++++.+.+.+ .|+. ..+|.++++++
T Consensus 2 ~~~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~ 81 (383)
T 3oqb_A 2 LTTQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALAD 81 (383)
T ss_dssp -CCEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHC
T ss_pred CCCceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcC
Confidence 455567999999 9999998 66 66666542 22 489999999888765 5764 67899999875
Q ss_pred --CCEEEEeCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 62 --SDVVITMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 62 --adivi~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
.|+|++|+|+..+ .+-+.. .++ .+.+++++. -+......+++.+...+.
T Consensus 82 ~~iD~V~i~tp~~~h-~~~~~~----al~----~Gk~V~~EKP~a~~~~~~~~l~~~a~~~ 133 (383)
T 3oqb_A 82 KNDTMFFDAATTQAR-PGLLTQ----AIN----AGKHVYCEKPIATNFEEALEVVKLANSK 133 (383)
T ss_dssp SSCCEEEECSCSSSS-HHHHHH----HHT----TTCEEEECSCSCSSHHHHHHHHHHHHHT
T ss_pred CCCCEEEECCCchHH-HHHHHH----HHH----CCCeEEEcCCCCCCHHHHHHHHHHHHHc
Confidence 8999999998765 333332 221 122344332 234566777777766654
No 229
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.21 E-value=1.2e-06 Score=67.74 Aligned_cols=71 Identities=14% Similarity=0.239 Sum_probs=56.1
Q ss_pred CCeEEEEcc----chhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHh
Q 021213 5 DQSVGFIGL----GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVY 80 (316)
Q Consensus 5 ~~~IgiiG~----G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~ 80 (316)
..+|+|||+ |.+|..+++.|.+.||+ +|++|+.. +.+ .|.....|+.++.+..|++++++|... +.+++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~--v~~Vnp~~-~~i--~G~~~y~sl~~l~~~vDlvvi~vp~~~--~~~vv 94 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYD--VYPVNPKY-EEV--LGRKCYPSVLDIPDKIEVVDLFVKPKL--TMEYV 94 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTC-SEE--TTEECBSSGGGCSSCCSEEEECSCHHH--HHHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCE--EEEECCCC-CeE--CCeeccCCHHHcCCCCCEEEEEeCHHH--HHHHH
Confidence 468999999 79999999999999997 55555553 111 477777889998888999999999754 57766
Q ss_pred cC
Q 021213 81 NG 82 (316)
Q Consensus 81 ~~ 82 (316)
.+
T Consensus 95 ~~ 96 (144)
T 2d59_A 95 EQ 96 (144)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 230
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=98.21 E-value=1.3e-06 Score=74.40 Aligned_cols=95 Identities=20% Similarity=0.132 Sum_probs=64.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPN 84 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~ 84 (316)
.+++.|||+|.+|.+++..|.+.|.+|++++|++++.+.+.+.++... +.+++ .++|+||.|+|.... -...+. ..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~-~~~~l-~~~DiVInaTp~Gm~-~~~~l~-~~ 193 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCF-MEPPK-SAFDLIINATSASLH-NELPLN-KE 193 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEE-SSCCS-SCCSEEEECCTTCCC-CSCSSC-HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEe-cHHHh-ccCCEEEEcccCCCC-CCCCCC-hH
Confidence 368999999999999999999999999999999999988875453322 23332 389999999997532 110000 00
Q ss_pred CcccCCCCCCCeEEEEcCCCC
Q 021213 85 GLLQGGNSVRPQLLIDSSTID 105 (316)
Q Consensus 85 ~~~~~~~~~~~~~vi~~st~~ 105 (316)
.+.+. ..++.+++|+...+
T Consensus 194 ~l~~~--l~~~~~v~D~vY~P 212 (269)
T 3phh_A 194 VLKGY--FKEGKLAYDLAYGF 212 (269)
T ss_dssp HHHHH--HHHCSEEEESCCSS
T ss_pred HHHhh--CCCCCEEEEeCCCC
Confidence 00000 11356889998875
No 231
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.21 E-value=1.8e-06 Score=75.53 Aligned_cols=67 Identities=19% Similarity=0.289 Sum_probs=51.6
Q ss_pred CeEEEEccchhhHHHHHHHHhCCC--eEEEEeCChhHHH----HHHh------CCCCCc-CCHHHHhhcCCEEEEeCCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMK----MFSD------MGVPTK-ETPFEVAEASDVVITMLPSS 72 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~--~V~~~~r~~~~~~----~l~~------~g~~~~-~~~~~~~~~adivi~~vp~~ 72 (316)
|||+|||+|.||.+++..|+..|+ +|.++|+++++++ .+.+ ...... ++..+++++||+||++.+.+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 699999999999999999999886 9999999987654 2332 122232 35577889999999986543
No 232
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.20 E-value=4.8e-06 Score=74.60 Aligned_cols=81 Identities=21% Similarity=0.307 Sum_probs=65.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCCh------hHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC------NVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLD 78 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~------~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~ 78 (316)
.++|+|||.|.-|.+-|.+|.++|.+|++--|.. ...+...+.|..+ .++.|+++.+|+|++.+|+..+ .+
T Consensus 37 gK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v-~~~~eA~~~ADvV~~L~PD~~q--~~ 113 (491)
T 3ulk_A 37 GKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKV-GTYEELIPQADLVINLTPDKQH--SD 113 (491)
T ss_dssp TSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEE-EEHHHHGGGCSEEEECSCGGGH--HH
T ss_pred CCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEe-cCHHHHHHhCCEEEEeCChhhH--HH
Confidence 4799999999999999999999999999887732 2345666778765 4799999999999999998764 66
Q ss_pred HhcCCCCccc
Q 021213 79 VYNGPNGLLQ 88 (316)
Q Consensus 79 v~~~~~~~~~ 88 (316)
++..+.+.++
T Consensus 114 vy~~I~p~lk 123 (491)
T 3ulk_A 114 VVRTVQPLMK 123 (491)
T ss_dssp HHHHHGGGSC
T ss_pred HHHHHHhhCC
Confidence 7766666554
No 233
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=98.19 E-value=2.5e-06 Score=77.57 Aligned_cols=69 Identities=23% Similarity=0.346 Sum_probs=56.6
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHH-hCCCCC--cCCHHHHhhcCCEEEEeCCCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFS-DMGVPT--KETPFEVAEASDVVITMLPSSS 73 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~-~~g~~~--~~~~~~~~~~adivi~~vp~~~ 73 (316)
.++|+|||+|.||..+++.+...|. +|+++||++++.+.+. +.|... ..+..+.+.++|+||.|+|.+.
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~~ 239 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPH 239 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSS
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCCC
Confidence 4789999999999999999999998 8999999998875554 345432 2466778889999999998654
No 234
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=98.19 E-value=7.1e-06 Score=73.65 Aligned_cols=68 Identities=21% Similarity=0.301 Sum_probs=55.0
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh-CCCCC------cCCHHHHhhcCCEEEEeCCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-MGVPT------KETPFEVAEASDVVITMLPSS 72 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~-~g~~~------~~~~~~~~~~adivi~~vp~~ 72 (316)
.++|+|+|+|.+|..+++.+...|++|+++||++++.+.+.+ .|... ..+..+.++.+|+||.|++.+
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~ 240 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVP 240 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCC
Confidence 478999999999999999999999999999999998877765 44431 234556778899999998754
No 235
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=98.18 E-value=6.1e-06 Score=75.22 Aligned_cols=105 Identities=18% Similarity=0.257 Sum_probs=73.8
Q ss_pred CeEEEEccchhhHHHHHHHHhCC---------CeE-EEEeCChhHHHHHHh-CCC-CCcCCHHHHhh--cCCEEEEeCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAG---------YKM-AVHDVNCNVMKMFSD-MGV-PTKETPFEVAE--ASDVVITMLPS 71 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g---------~~V-~~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~adivi~~vp~ 71 (316)
+||||||+|.||...+..+.+.+ .+| .++|+++++++.+.+ .|+ ...+|.+++++ +.|+|++|+|+
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp~ 106 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSPN 106 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCCc
Confidence 68999999999999988887642 354 478999999888766 465 46789999986 57999999999
Q ss_pred ChhhHHHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 72 SSHQVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 72 ~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
..+ .+-++.. ++. +..+++.. -+......+++.+...+.
T Consensus 107 ~~H-~~~~~~a----l~a----GkhVl~EKP~a~~~~ea~~l~~~a~~~ 146 (412)
T 4gqa_A 107 HLH-YTMAMAA----IAA----GKHVYCEKPLAVNEQQAQEMAQAARRA 146 (412)
T ss_dssp GGH-HHHHHHH----HHT----TCEEEEESCSCSSHHHHHHHHHHHHHH
T ss_pred HHH-HHHHHHH----HHc----CCCeEeecCCcCCHHHHHHHHHHHHHh
Confidence 876 4444332 211 22344443 234566777777766554
No 236
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=98.18 E-value=8.5e-07 Score=76.37 Aligned_cols=94 Identities=12% Similarity=0.083 Sum_probs=65.3
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHHhC----CCCCcCCHHHHhhcCCEEEEeCCCChhhHHHH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDM----GVPTKETPFEVAEASDVVITMLPSSSHQVLDV 79 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~~~----g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v 79 (316)
.+++.|+|+|.+|.+++..|.+.|. +|++++|++++.+.+.+. +-....+.+++.+++|+||.|+|.... ....
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~-~~~~ 204 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLD-GELP 204 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC-----C
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCC-CCCC
Confidence 4789999999999999999999995 999999999988777652 111122444544789999999998642 1111
Q ss_pred hcCCCCcccCCCCCCCeEEEEcCCCC
Q 021213 80 YNGPNGLLQGGNSVRPQLLIDSSTID 105 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~vi~~st~~ 105 (316)
... ...+ .++.+++|+...+
T Consensus 205 ~l~-~~~l-----~~~~~V~DlvY~P 224 (281)
T 3o8q_A 205 AID-PVIF-----SSRSVCYDMMYGK 224 (281)
T ss_dssp SCC-GGGE-----EEEEEEEESCCCS
T ss_pred CCC-HHHh-----CcCCEEEEecCCC
Confidence 001 1122 2456889998875
No 237
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.17 E-value=4.3e-06 Score=73.92 Aligned_cols=66 Identities=11% Similarity=0.112 Sum_probs=52.9
Q ss_pred CCeEEEEcc-chhhHHHHHHHHhCC--CeEEEEeCChhHHHH----HHhC-----CCCCcCCHHHHhhcCCEEEEeCC
Q 021213 5 DQSVGFIGL-GNMGFRMASNLMKAG--YKMAVHDVNCNVMKM----FSDM-----GVPTKETPFEVAEASDVVITMLP 70 (316)
Q Consensus 5 ~~~IgiiG~-G~mG~~la~~l~~~g--~~V~~~~r~~~~~~~----l~~~-----g~~~~~~~~~~~~~adivi~~vp 70 (316)
++||+|||+ |.+|..++..++..| ++|.++|++.++++. +.+. .+..+++..+++++||+||++..
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 579999998 999999999999988 589999999876543 4431 23345678888999999999853
No 238
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=98.15 E-value=1e-05 Score=73.06 Aligned_cols=65 Identities=17% Similarity=0.237 Sum_probs=54.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCc--CC---------------------------H
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTK--ET---------------------------P 55 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~--~~---------------------------~ 55 (316)
..+|+|+|+|.+|...++.+...|.+|+++|+++++.+.+.+.|.... ++ .
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l 251 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAV 251 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHH
Confidence 468999999999999999999999999999999988877777775433 11 5
Q ss_pred HHHhhcCCEEEEeC
Q 021213 56 FEVAEASDVVITML 69 (316)
Q Consensus 56 ~~~~~~adivi~~v 69 (316)
.+.++.+|+||.|+
T Consensus 252 ~~~~~~aDvVi~~~ 265 (384)
T 1l7d_A 252 LKELVKTDIAITTA 265 (384)
T ss_dssp HHHHTTCSEEEECC
T ss_pred HHHhCCCCEEEECC
Confidence 56778899999988
No 239
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=98.14 E-value=4.6e-06 Score=75.86 Aligned_cols=70 Identities=20% Similarity=0.288 Sum_probs=57.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCc----CCHH---HH-hhcCCEEEEeCCCChh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTK----ETPF---EV-AEASDVVITMLPSSSH 74 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~----~~~~---~~-~~~adivi~~vp~~~~ 74 (316)
.++|.|+|+|.+|..+++.|.+.|++|+++|+++++++.+.+.|..+. ++.+ ++ ++++|+||+|++++..
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~ 81 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQT 81 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHH
Confidence 468999999999999999999999999999999999999988876432 2222 22 4679999999988654
No 240
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.14 E-value=3.1e-06 Score=74.30 Aligned_cols=69 Identities=19% Similarity=0.161 Sum_probs=51.5
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCC--eEEEEeCChhHHHHH----HhC------CCCCcCCHHHHhhcCCEEEEeCCC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKMF----SDM------GVPTKETPFEVAEASDVVITMLPS 71 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~--~V~~~~r~~~~~~~l----~~~------g~~~~~~~~~~~~~adivi~~vp~ 71 (316)
+.+||+|||+|.||.+++..|+..|. +|.++|+++++.+.. .+. ..+...+..+++++||+||++.|.
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~ 84 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGA 84 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCC
Confidence 34799999999999999999988774 899999998755432 221 112223456778999999999765
Q ss_pred C
Q 021213 72 S 72 (316)
Q Consensus 72 ~ 72 (316)
+
T Consensus 85 ~ 85 (316)
T 1ldn_A 85 N 85 (316)
T ss_dssp C
T ss_pred C
Confidence 4
No 241
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.12 E-value=9.9e-06 Score=71.07 Aligned_cols=68 Identities=19% Similarity=0.251 Sum_probs=52.0
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC--eEEEEeCChhHHHH----HHhC-----CCCCcCCHHHHhhcCCEEEEeCCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKM----FSDM-----GVPTKETPFEVAEASDVVITMLPSS 72 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~--~V~~~~r~~~~~~~----l~~~-----g~~~~~~~~~~~~~adivi~~vp~~ 72 (316)
.|||+|||+|.+|.+++..|+..+. +|.++|+++++++. +.+. ..+...+..+++++||+||++.+.+
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~ 83 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAP 83 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCC
Confidence 4799999999999999999998876 89999999887653 2221 2223335577789999999987654
No 242
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=98.12 E-value=8.8e-06 Score=69.80 Aligned_cols=93 Identities=12% Similarity=0.071 Sum_probs=65.0
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC-CC--CC-cCCHHHHh-hcCCEEEEeCCCChhhHHHH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-GV--PT-KETPFEVA-EASDVVITMLPSSSHQVLDV 79 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~-g~--~~-~~~~~~~~-~~adivi~~vp~~~~~~~~v 79 (316)
.+++.|+|+|.+|.+++..|++.|++|++++|++++.+.+.+. +. .. ..+.+++. ..+|+||.|+|.... ..+
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~--~~~ 196 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGIS--GDI 196 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGG--TCC
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCC--CCC
Confidence 4789999999999999999999999999999999988777542 21 11 12333333 489999999986542 111
Q ss_pred hcCCC-CcccCCCCCCCeEEEEcCCCC
Q 021213 80 YNGPN-GLLQGGNSVRPQLLIDSSTID 105 (316)
Q Consensus 80 ~~~~~-~~~~~~~~~~~~~vi~~st~~ 105 (316)
..+. .. ..++.+++|+....
T Consensus 197 -~~i~~~~-----l~~~~~v~D~~y~p 217 (271)
T 1nyt_A 197 -PAIPSSL-----IHPGIYCYDMFYQK 217 (271)
T ss_dssp -CCCCGGG-----CCTTCEEEESCCCS
T ss_pred -CCCCHHH-----cCCCCEEEEeccCC
Confidence 1111 11 23567899998874
No 243
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=98.11 E-value=1.5e-05 Score=71.87 Aligned_cols=105 Identities=15% Similarity=0.176 Sum_probs=70.1
Q ss_pred CeEEEEccchhhHHHHHHHHhC--------CCe-EEEEeCChhHHHHHHh-CCCC-CcCCHHHHhh--cCCEEEEeCCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKA--------GYK-MAVHDVNCNVMKMFSD-MGVP-TKETPFEVAE--ASDVVITMLPSS 72 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~--------g~~-V~~~~r~~~~~~~l~~-~g~~-~~~~~~~~~~--~adivi~~vp~~ 72 (316)
-||||||+|.||...+..+.+. +.+ |.++|+++++++.+.+ .|+. ..+|.+++++ +.|+|++|+|+.
T Consensus 26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~IatP~~ 105 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTTPNQ 105 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECSCGG
T ss_pred ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECCChH
Confidence 4799999999999877766432 345 4578999999888766 4654 6789999986 479999999998
Q ss_pred hhhHHHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 73 SHQVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 73 ~~~~~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
.+ .+-+... ++. +..+++.- -+......+++.+...+.
T Consensus 106 ~H-~~~a~~a----l~a----GkhVl~EKPla~~~~ea~~l~~~a~~~ 144 (393)
T 4fb5_A 106 FH-AEMAIAA----LEA----GKHVWCEKPMAPAYADAERMLATAERS 144 (393)
T ss_dssp GH-HHHHHHH----HHT----TCEEEECSCSCSSHHHHHHHHHHHHHS
T ss_pred HH-HHHHHHH----Hhc----CCeEEEccCCcccHHHHHHhhhhHHhc
Confidence 77 4444332 211 22344432 234566777777766654
No 244
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.11 E-value=1.1e-05 Score=71.07 Aligned_cols=68 Identities=19% Similarity=0.260 Sum_probs=52.3
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC--eEEEEeCChhHHHH----HHhC-----CCCCcCCHHHHhhcCCEEEEeCCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKM----FSDM-----GVPTKETPFEVAEASDVVITMLPSS 72 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~--~V~~~~r~~~~~~~----l~~~-----g~~~~~~~~~~~~~adivi~~vp~~ 72 (316)
.|||+|||+|.+|.+++..|+..+. +|.++|+++++++. +.+. ......+..+++++||+||++.+.+
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~ 87 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAP 87 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 4799999999999999999988875 89999999877644 2221 1223335577789999999987554
No 245
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.08 E-value=6.1e-06 Score=72.42 Aligned_cols=67 Identities=19% Similarity=0.265 Sum_probs=52.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC--eEEEEeCChhHHHH----HHhC-----CCCCcCCHHHHhhcCCEEEEeCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKM----FSDM-----GVPTKETPFEVAEASDVVITMLPS 71 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~--~V~~~~r~~~~~~~----l~~~-----g~~~~~~~~~~~~~adivi~~vp~ 71 (316)
.+||+|||+|.||.+++..|+..|+ ++.++|+++++++. +.+. .....++..+++++||+||++...
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCC
Confidence 4799999999999999999999886 89999999887653 3321 233344556788999999998643
No 246
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=98.08 E-value=1.2e-05 Score=73.17 Aligned_cols=68 Identities=18% Similarity=0.230 Sum_probs=53.1
Q ss_pred CCeEEEEccchhhHHHHHHHHhC-CCe-EEEEeCChhHHHHHHh-C-C----------------------CCCcCCHHHH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKA-GYK-MAVHDVNCNVMKMFSD-M-G----------------------VPTKETPFEV 58 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~-g~~-V~~~~r~~~~~~~l~~-~-g----------------------~~~~~~~~~~ 58 (316)
+.||||||+|.||..++..+.+. +.+ +.++|+++++.+.+.+ . | ...++|.+++
T Consensus 23 ~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeL 102 (446)
T 3upl_A 23 PIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLI 102 (446)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHH
T ss_pred ceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHH
Confidence 46899999999999999988764 345 4578999998876643 1 3 3356789998
Q ss_pred hh--cCCEEEEeCCCC
Q 021213 59 AE--ASDVVITMLPSS 72 (316)
Q Consensus 59 ~~--~adivi~~vp~~ 72 (316)
++ +.|+|++|+|.+
T Consensus 103 L~d~dIDaVviaTp~p 118 (446)
T 3upl_A 103 LSNPLIDVIIDATGIP 118 (446)
T ss_dssp HTCTTCCEEEECSCCH
T ss_pred hcCCCCCEEEEcCCCh
Confidence 87 489999999875
No 247
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=98.05 E-value=3.5e-06 Score=72.35 Aligned_cols=95 Identities=13% Similarity=0.085 Sum_probs=62.9
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC-CC--CC-cCCHHHHhh-cCCEEEEeCCCChhhHHHH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-GV--PT-KETPFEVAE-ASDVVITMLPSSSHQVLDV 79 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~-g~--~~-~~~~~~~~~-~adivi~~vp~~~~~~~~v 79 (316)
.+++.|+|+|.||.+++..|++.|++|++|+|++++.+.+.+. +. .. ..+.+++.+ ++|+||.|+|.... ..+
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~~--~~~ 196 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGLS--GGT 196 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC--------
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCCC--CCC
Confidence 4789999999999999999999999999999999988777642 11 11 123333323 79999999997642 121
Q ss_pred hcCCC-CcccCCCCCCCeEEEEcCCCCHH
Q 021213 80 YNGPN-GLLQGGNSVRPQLLIDSSTIDPQ 107 (316)
Q Consensus 80 ~~~~~-~~~~~~~~~~~~~vi~~st~~~~ 107 (316)
..+. ..+ .++.+++|++.....
T Consensus 197 -~~i~~~~l-----~~~~~v~D~~y~p~~ 219 (272)
T 1p77_A 197 -ASVDAEIL-----KLGSAFYDMQYAKGT 219 (272)
T ss_dssp --CCCHHHH-----HHCSCEEESCCCTTS
T ss_pred -CCCCHHHc-----CCCCEEEEeeCCCCc
Confidence 1111 112 134588888886543
No 248
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.04 E-value=1.3e-05 Score=74.03 Aligned_cols=95 Identities=19% Similarity=0.250 Sum_probs=66.0
Q ss_pred CCCeEEEEccchhhHHHHHHHHhC-CCeEEEEeCChhHHHHHHhC-CCCC----cC---CHHHHhhcCCEEEEeCCCChh
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKA-GYKMAVHDVNCNVMKMFSDM-GVPT----KE---TPFEVAEASDVVITMLPSSSH 74 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~-g~~V~~~~r~~~~~~~l~~~-g~~~----~~---~~~~~~~~adivi~~vp~~~~ 74 (316)
.+++|.|+|+|.+|.+++..|++. |++|++++|++++++.+.+. ++.. .. +..++++++|+||.|+|....
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~~~ 101 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYTFH 101 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGGGH
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchhhh
Confidence 346899999999999999999998 78999999999998887653 3221 11 344567899999999987532
Q ss_pred hHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHH
Q 021213 75 QVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQT 108 (316)
Q Consensus 75 ~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~ 108 (316)
..+.. ..++ .+..++|.+...|..
T Consensus 102 --~~v~~---a~l~-----~g~~vvd~~~~~p~~ 125 (467)
T 2axq_A 102 --PNVVK---SAIR-----TKTDVVTSSYISPAL 125 (467)
T ss_dssp --HHHHH---HHHH-----HTCEEEECSCCCHHH
T ss_pred --HHHHH---HHHh-----cCCEEEEeecCCHHH
Confidence 22221 1121 234677776655654
No 249
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=98.04 E-value=2.2e-05 Score=72.11 Aligned_cols=91 Identities=14% Similarity=0.164 Sum_probs=69.4
Q ss_pred CCCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHH-Hhc
Q 021213 3 FFDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLD-VYN 81 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~-v~~ 81 (316)
+..++++|+|+|.+|.++|+.|...|.+|+++|+++.+.......|.. ..+.+++++.+|+++.+...... +.. .+.
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~d-v~~lee~~~~aDvVi~atG~~~v-l~~e~l~ 340 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQ-VLTLEDVVSEADIFVTTTGNKDI-IMLDHMK 340 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCGGGTTTTCSEEEECSSCSCS-BCHHHHT
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCc-cCCHHHHHHhcCEEEeCCCChhh-hhHHHHH
Confidence 345789999999999999999999999999999999887777766654 35678888899999998764332 222 232
Q ss_pred CCCCcccCCCCCCCeEEEEcCCC
Q 021213 82 GPNGLLQGGNSVRPQLLIDSSTI 104 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~~vi~~st~ 104 (316)
. ..++.++++.+..
T Consensus 341 ~---------mk~gaiVvNaG~~ 354 (488)
T 3ond_A 341 K---------MKNNAIVCNIGHF 354 (488)
T ss_dssp T---------SCTTEEEEESSST
T ss_pred h---------cCCCeEEEEcCCC
Confidence 1 2356688888765
No 250
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=98.01 E-value=3.4e-05 Score=66.69 Aligned_cols=105 Identities=15% Similarity=0.144 Sum_probs=69.6
Q ss_pred CCeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhh--cCCEEEEeCCCChhhHHHHhc
Q 021213 5 DQSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITMLPSSSHQVLDVYN 81 (316)
Q Consensus 5 ~~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~adivi~~vp~~~~~~~~v~~ 81 (316)
++||+|+|+ |.||..+++.+.+.|++ .++..+|.+.. -...|+....|.+++.+ .+|++++|+|.... .+++.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~-~V~~V~p~~~g-~~~~G~~vy~sl~el~~~~~~D~viI~tP~~~~--~~~~~ 82 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTK-MVGGVTPGKGG-TTHLGLPVFNTVREAVAATGATASVIYVPAPFC--KDSIL 82 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTT-CEETTEEEESSHHHHHHHHCCCEEEECCCGGGH--HHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCCccc-ceeCCeeccCCHHHHhhcCCCCEEEEecCHHHH--HHHHH
Confidence 478999999 99999999999988998 34444444210 01356777889999988 89999999998763 55443
Q ss_pred CCCCcccCCCCCCCeEEEEcCCCC-HHHHHHHHHHHhhch
Q 021213 82 GPNGLLQGGNSVRPQLLIDSSTID-PQTSRNISAAVSNCI 120 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~~vi~~st~~-~~~~~~l~~~~~~~~ 120 (316)
+. ++. +-+.+|..+.+. ....+++.+...+.+
T Consensus 83 ea---~~~----Gi~~iVi~t~G~~~~~~~~l~~~A~~~g 115 (288)
T 2nu8_A 83 EA---IDA----GIKLIITITEGIPTLDMLTVKVKLDEAG 115 (288)
T ss_dssp HH---HHT----TCSEEEECCCCCCHHHHHHHHHHHHHHT
T ss_pred HH---HHC----CCCEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 22 221 223445555543 444556666665544
No 251
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=98.00 E-value=4.4e-06 Score=74.05 Aligned_cols=106 Identities=9% Similarity=0.082 Sum_probs=68.6
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEE-EEeCCh-hHHHHHH----hCCC--CCcCCHHHHhh--cCCEEEEeCCCCh
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMA-VHDVNC-NVMKMFS----DMGV--PTKETPFEVAE--ASDVVITMLPSSS 73 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~-~~~r~~-~~~~~l~----~~g~--~~~~~~~~~~~--~adivi~~vp~~~ 73 (316)
|++||||||+|.+|...+..| ..+.+|. ++|+++ ++.+.+. +.|+ ...+|.+++++ +.|+|++|+|+..
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~ 79 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFSL 79 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSHHH
T ss_pred CceEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCcch
Confidence 357999999999998887777 5667765 688887 3333332 2354 56789999986 4899999999876
Q ss_pred hhHHHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 74 HQVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
+ .+-+.. .++. +..+++.. -+......+++.+...+.
T Consensus 80 H-~~~~~~----al~a----GkhVl~EKPla~~~~ea~~l~~~a~~~ 117 (337)
T 3ip3_A 80 N-GKILLE----ALER----KIHAFVEKPIATTFEDLEKIRSVYQKV 117 (337)
T ss_dssp H-HHHHHH----HHHT----TCEEEECSSSCSSHHHHHHHHHHHHHH
T ss_pred H-HHHHHH----HHHC----CCcEEEeCCCCCCHHHHHHHHHHHHHh
Confidence 5 333332 1211 22344432 234466777777766654
No 252
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=98.00 E-value=1.5e-05 Score=70.37 Aligned_cols=102 Identities=16% Similarity=0.214 Sum_probs=69.6
Q ss_pred CCCeEEEEccchhhH-HHHHHHHhC-CCeE-EEEeCChhHHHHHHhCCCCCcCCHHHHhhc---CCEEEEeCCCChhhHH
Q 021213 4 FDQSVGFIGLGNMGF-RMASNLMKA-GYKM-AVHDVNCNVMKMFSDMGVPTKETPFEVAEA---SDVVITMLPSSSHQVL 77 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~-~la~~l~~~-g~~V-~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~---adivi~~vp~~~~~~~ 77 (316)
.++||||||+|.||. ..+..|.+. +.+| .++|+++++ .|+...+|.++++++ .|+|++|+|...+ .+
T Consensus 24 ~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~------~g~~~~~~~~~ll~~~~~vD~V~i~tp~~~H-~~ 96 (330)
T 4ew6_A 24 SPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV------EGVNSYTTIEAMLDAEPSIDAVSLCMPPQYR-YE 96 (330)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC------TTSEEESSHHHHHHHCTTCCEEEECSCHHHH-HH
T ss_pred CCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh------cCCCccCCHHHHHhCCCCCCEEEEeCCcHHH-HH
Confidence 347999999999998 788888875 5664 468888653 467778899999865 8999999998765 33
Q ss_pred HHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhch
Q 021213 78 DVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNCI 120 (316)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~~ 120 (316)
-+.. .++. +..+++.. -+......+++.+...+.+
T Consensus 97 ~~~~----al~a----GkhVl~EKP~a~~~~e~~~l~~~a~~~g 132 (330)
T 4ew6_A 97 AAYK----ALVA----GKHVFLEKPPGATLSEVADLEALANKQG 132 (330)
T ss_dssp HHHH----HHHT----TCEEEECSSSCSSHHHHHHHHHHHHHHT
T ss_pred HHHH----HHHc----CCcEEEeCCCCCCHHHHHHHHHHHHhcC
Confidence 3322 2221 22344443 2345667777777666543
No 253
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.99 E-value=1.2e-05 Score=68.87 Aligned_cols=93 Identities=12% Similarity=0.098 Sum_probs=64.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHHhC-CC--CCcCCHHHHh-hcCCEEEEeCCCChhhHHHH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDM-GV--PTKETPFEVA-EASDVVITMLPSSSHQVLDV 79 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~~~-g~--~~~~~~~~~~-~~adivi~~vp~~~~~~~~v 79 (316)
.+++.|+|+|.+|.+++..|.+.|. +|++++|++++.+.+.+. +. ....+.+++. .++|+||.|+|.... .+.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~--~~~ 197 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLT--ADL 197 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGG--TCC
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCC--CCC
Confidence 4689999999999999999999995 999999999998887653 11 1112233332 689999999997532 110
Q ss_pred hcCC-CCcccCCCCCCCeEEEEcCCCC
Q 021213 80 YNGP-NGLLQGGNSVRPQLLIDSSTID 105 (316)
Q Consensus 80 ~~~~-~~~~~~~~~~~~~~vi~~st~~ 105 (316)
..+ ...+ .++.+++|+...+
T Consensus 198 -~~i~~~~l-----~~~~~V~DlvY~P 218 (272)
T 3pwz_A 198 -PPLPADVL-----GEAALAYELAYGK 218 (272)
T ss_dssp -CCCCGGGG-----TTCSEEEESSCSC
T ss_pred -CCCCHHHh-----CcCCEEEEeecCC
Confidence 011 1122 3556899998774
No 254
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.98 E-value=1.7e-05 Score=68.79 Aligned_cols=102 Identities=18% Similarity=0.081 Sum_probs=68.6
Q ss_pred CCeEEEEccchhhHHHHHHHHh----CCCeEE-EEeCChhHHHHHHhCCCCCcCCHHHHhh--cCCEEEEeCCCChhhHH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMK----AGYKMA-VHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITMLPSSSHQVL 77 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~----~g~~V~-~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~adivi~~vp~~~~~~~ 77 (316)
++||||||+|.||...+..+.+ .+.++. +++++... ...|+. ..|.+++++ +.|+|++|+|+..+ .+
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a----~~~g~~-~~~~~ell~~~~vD~V~i~tp~~~H-~~ 80 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELG----SLDEVR-QISLEDALRSQEIDVAYICSESSSH-ED 80 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCC----EETTEE-BCCHHHHHHCSSEEEEEECSCGGGH-HH
T ss_pred cceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHHH----HHcCCC-CCCHHHHhcCCCCCEEEEeCCcHhH-HH
Confidence 4689999999999999998865 345644 67876321 123444 478999886 67999999998876 44
Q ss_pred HHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhch
Q 021213 78 DVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNCI 120 (316)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~~ 120 (316)
-+.. .++. +.+++++. .+..+...+++.+...+.+
T Consensus 81 ~~~~----al~a----GkhVl~EKPla~~~~ea~~l~~~a~~~g 116 (294)
T 1lc0_A 81 YIRQ----FLQA----GKHVLVEYPMTLSFAAAQELWELAAQKG 116 (294)
T ss_dssp HHHH----HHHT----TCEEEEESCSCSCHHHHHHHHHHHHHTT
T ss_pred HHHH----HHHC----CCcEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 4432 2221 33466664 4456777788887776543
No 255
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.98 E-value=2e-05 Score=70.89 Aligned_cols=102 Identities=17% Similarity=0.185 Sum_probs=70.0
Q ss_pred CeEEEEccchhhHHHHHHHHhCC--------Ce-EEEEeCChhHHHHHHh-CCC-CCcCCHHHHhh--cCCEEEEeCCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAG--------YK-MAVHDVNCNVMKMFSD-MGV-PTKETPFEVAE--ASDVVITMLPSS 72 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g--------~~-V~~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~adivi~~vp~~ 72 (316)
-||||||+|.||...+..+.+.. .+ +.++|+++++++.+.+ .|+ ...+|.+++++ +.|+|++|+|+.
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP~~ 86 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTPGD 86 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSCGG
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChH
Confidence 48999999999998888876532 24 4578999999888765 465 45788999986 479999999998
Q ss_pred hhhHHHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHH
Q 021213 73 SHQVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAV 116 (316)
Q Consensus 73 ~~~~~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~ 116 (316)
.+ .+-++.. ++ .+.++++.- -+......++|.+..
T Consensus 87 ~H-~~~~~~a----l~----aGkhVl~EKPla~t~~ea~~l~~~~ 122 (390)
T 4h3v_A 87 SH-AEIAIAA----LE----AGKHVLCEKPLANTVAEAEAMAAAA 122 (390)
T ss_dssp GH-HHHHHHH----HH----TTCEEEEESSSCSSHHHHHHHHHHH
T ss_pred HH-HHHHHHH----HH----cCCCceeecCcccchhHHHHHHHHH
Confidence 77 4444332 21 123355543 334466667775443
No 256
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.98 E-value=9.5e-06 Score=69.47 Aligned_cols=67 Identities=13% Similarity=0.258 Sum_probs=53.1
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHHhC-CCCCcCCHHHHhhcCCEEEEeCCCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDM-GVPTKETPFEVAEASDVVITMLPSSS 73 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~~~-g~~~~~~~~~~~~~adivi~~vp~~~ 73 (316)
.+++.|||+|.+|.+++..|.+.|. +|++|+|++++.+.+.+. +.....+.. ..++|+||.|+|...
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~gm 187 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIGM 187 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTTC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCCc
Confidence 3689999999999999999999996 899999999998887653 332222222 467999999999753
No 257
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.95 E-value=2.8e-05 Score=69.47 Aligned_cols=68 Identities=15% Similarity=0.185 Sum_probs=54.7
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCC-------cCCHHHHhhcCCEEEEeCCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPT-------KETPFEVAEASDVVITMLPSS 72 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~-------~~~~~~~~~~adivi~~vp~~ 72 (316)
..+|.|+|+|.+|...++.+...|.+|+++||++++.+.+.+.+... ..+..+.++.+|+||-|++.+
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~ 241 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVP 241 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcC
Confidence 36899999999999999999999999999999999988776644221 123445667899999998653
No 258
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=97.94 E-value=6.6e-06 Score=72.15 Aligned_cols=66 Identities=14% Similarity=0.166 Sum_probs=50.6
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC--eEEEEeCChhHHHH----HHhC-------CCCCcCCHHHHhhcCCEEEEeCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKM----FSDM-------GVPTKETPFEVAEASDVVITMLPS 71 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~--~V~~~~r~~~~~~~----l~~~-------g~~~~~~~~~~~~~adivi~~vp~ 71 (316)
.+||+|||+|.||..++..++..|+ +|.++|+++++++. +.+. .+..+.+.++ +++||+||++...
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG~ 99 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAGA 99 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCCC
Confidence 4799999999999999999999986 99999999876543 2221 1223456655 8999999998543
No 259
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.93 E-value=2.3e-05 Score=68.59 Aligned_cols=105 Identities=16% Similarity=0.158 Sum_probs=71.8
Q ss_pred CCeEEEEcc-chhhHHHHHHHHhCCCeE-EEEeCChhHHHHHHhC--CCCCcCCHHHHh----------hcCCEEEEeCC
Q 021213 5 DQSVGFIGL-GNMGFRMASNLMKAGYKM-AVHDVNCNVMKMFSDM--GVPTKETPFEVA----------EASDVVITMLP 70 (316)
Q Consensus 5 ~~~IgiiG~-G~mG~~la~~l~~~g~~V-~~~~r~~~~~~~l~~~--g~~~~~~~~~~~----------~~adivi~~vp 70 (316)
++||||||+ |.+|...+..+.+.+.++ .++|+++++. .+.+. +....++.++++ .+.|+|++|+|
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP 81 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVG-LVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASP 81 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-GGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSC
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHH-HHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCC
Confidence 369999999 789999999999988774 5789988763 23332 456678888887 46899999999
Q ss_pred CChhhHHHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 71 SSSHQVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 71 ~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
+..+ .+-+.. .++. +..+++.. -+......+++.+...+.
T Consensus 82 ~~~H-~~~~~~----al~a----GkhVl~EKPla~~~~ea~~l~~~a~~~ 122 (312)
T 3o9z_A 82 NHLH-YPQIRM----ALRL----GANALSEKPLVLWPEEIARLKELEART 122 (312)
T ss_dssp GGGH-HHHHHH----HHHT----TCEEEECSSSCSCHHHHHHHHHHHHHH
T ss_pred chhh-HHHHHH----HHHC----CCeEEEECCCCCCHHHHHHHHHHHHHc
Confidence 9876 333332 2221 22344442 234567777777766654
No 260
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.93 E-value=2.6e-05 Score=68.52 Aligned_cols=105 Identities=14% Similarity=0.108 Sum_probs=71.9
Q ss_pred CCeEEEEcc-chhhHHHHHHHHhCCCeE-EEEeCChhHHHHHHhC--CCCCcCCHHHHh-----------hcCCEEEEeC
Q 021213 5 DQSVGFIGL-GNMGFRMASNLMKAGYKM-AVHDVNCNVMKMFSDM--GVPTKETPFEVA-----------EASDVVITML 69 (316)
Q Consensus 5 ~~~IgiiG~-G~mG~~la~~l~~~g~~V-~~~~r~~~~~~~l~~~--g~~~~~~~~~~~-----------~~adivi~~v 69 (316)
++||||||+ |.||...+..+.+.+.++ .++|+++++. .+.+. +....++.++++ .+.|+|++|+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~t 81 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVG-IIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICS 81 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-GGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECS
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHH-HHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECC
Confidence 369999999 789999999999988774 5789988763 23332 456678888876 4689999999
Q ss_pred CCChhhHHHHhcCCCCcccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhc
Q 021213 70 PSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNC 119 (316)
Q Consensus 70 p~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~ 119 (316)
|+..+ .+-+.. .++. +.++++.. -+..+...+++.+...+.
T Consensus 82 P~~~H-~~~~~~----al~a----GkhVl~EKPla~~~~ea~~l~~~a~~~ 123 (318)
T 3oa2_A 82 PNYLH-YPHIAA----GLRL----GCDVICEKPLVPTPEMLDQLAVIERET 123 (318)
T ss_dssp CGGGH-HHHHHH----HHHT----TCEEEECSSCCSCHHHHHHHHHHHHHH
T ss_pred CcHHH-HHHHHH----HHHC----CCeEEEECCCcCCHHHHHHHHHHHHHh
Confidence 99876 333332 2221 22345443 234577777777766654
No 261
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.92 E-value=1.1e-05 Score=69.02 Aligned_cols=68 Identities=18% Similarity=0.229 Sum_probs=50.2
Q ss_pred CCeEEEEc-cchhhHHHHHHHHhC-CCeEEE-EeCChhHH-----HHHH--hCCCCCcCCHHHHhhcCCEEEEeCCCC
Q 021213 5 DQSVGFIG-LGNMGFRMASNLMKA-GYKMAV-HDVNCNVM-----KMFS--DMGVPTKETPFEVAEASDVVITMLPSS 72 (316)
Q Consensus 5 ~~~IgiiG-~G~mG~~la~~l~~~-g~~V~~-~~r~~~~~-----~~l~--~~g~~~~~~~~~~~~~adivi~~vp~~ 72 (316)
++||+|+| +|+||..+++.+.+. ++++.. ++|+++.. ..+. ..|+...++++++++++|+||-+++..
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~p~ 84 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTLPE 84 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSCHH
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCCHH
Confidence 47999999 899999999998865 567654 68874321 1111 125667789999999999999988643
No 262
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.91 E-value=1.4e-05 Score=69.92 Aligned_cols=71 Identities=23% Similarity=0.253 Sum_probs=51.6
Q ss_pred CCCeEEEEccchhhHHHHHHHHh-C-CCe-EEEEeCChhH-HHHH-HhCCCCC-cCCHHHHhh-----cCCEEEEeCCCC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMK-A-GYK-MAVHDVNCNV-MKMF-SDMGVPT-KETPFEVAE-----ASDVVITMLPSS 72 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~-~-g~~-V~~~~r~~~~-~~~l-~~~g~~~-~~~~~~~~~-----~adivi~~vp~~ 72 (316)
+++||+|||+|.+|..+++.+.+ . +.+ +.++|+++++ ...+ .+.|... .++.+++++ +.|+||+|+|..
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp~~ 82 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSAS 82 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCHH
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCChH
Confidence 35799999999999999999966 3 444 4567999877 4444 4466653 455666654 479999999965
Q ss_pred hh
Q 021213 73 SH 74 (316)
Q Consensus 73 ~~ 74 (316)
.+
T Consensus 83 ~h 84 (312)
T 1nvm_B 83 AH 84 (312)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 263
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.91 E-value=1.5e-05 Score=73.31 Aligned_cols=69 Identities=20% Similarity=0.181 Sum_probs=53.4
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC-C-C-----CCc--CCHHHHhhcCCEEEEeCCCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-G-V-----PTK--ETPFEVAEASDVVITMLPSSS 73 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~-g-~-----~~~--~~~~~~~~~adivi~~vp~~~ 73 (316)
+++|.|+|+|.+|.+++..|++.|++|++++|++++.+.+.+. + . ... .+..++++++|+||.|+|...
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~ 80 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTF 80 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--C
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCcccc
Confidence 4689999999999999999999999999999999888776542 1 1 111 133466788999999998643
No 264
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.90 E-value=1.9e-05 Score=69.55 Aligned_cols=68 Identities=16% Similarity=0.113 Sum_probs=50.8
Q ss_pred CCCeEEEEc-cchhhHHHHHHHHhCC--CeEEEEeCChhH--HHHHHhCCC----CC---cCCHHHHhhcCCEEEEeCCC
Q 021213 4 FDQSVGFIG-LGNMGFRMASNLMKAG--YKMAVHDVNCNV--MKMFSDMGV----PT---KETPFEVAEASDVVITMLPS 71 (316)
Q Consensus 4 ~~~~IgiiG-~G~mG~~la~~l~~~g--~~V~~~~r~~~~--~~~l~~~g~----~~---~~~~~~~~~~adivi~~vp~ 71 (316)
++|||+|+| +|.+|..++..|+..| ++|.++|++++. ...+.+... .. .++..++++++|+||++.+.
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~ 86 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGV 86 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCc
Confidence 357999999 8999999999999998 899999988762 222443221 11 23557889999999998653
No 265
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.90 E-value=2.4e-05 Score=67.35 Aligned_cols=94 Identities=19% Similarity=0.173 Sum_probs=66.1
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHHhC------CCC--Cc--CCHHHHhhcCCEEEEeCCCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDM------GVP--TK--ETPFEVAEASDVVITMLPSSS 73 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~~~------g~~--~~--~~~~~~~~~adivi~~vp~~~ 73 (316)
.+++.|+|+|.+|.+++..|++.|. +|++++|++++.+.+.+. +.. .. .+..+.++++|+||-|+|..-
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp~Gm 206 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGM 206 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSSTTS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCCCCC
Confidence 4689999999999999999999998 799999999988776431 111 22 267778889999999998653
Q ss_pred hhHHHHhcCC-CCcccCCCCCCCeEEEEcCCCC
Q 021213 74 HQVLDVYNGP-NGLLQGGNSVRPQLLIDSSTID 105 (316)
Q Consensus 74 ~~~~~v~~~~-~~~~~~~~~~~~~~vi~~st~~ 105 (316)
. ...-..+ ... ..++.+++|+.-.+
T Consensus 207 ~--~~~~~pi~~~~-----l~~~~~v~DlvY~P 232 (283)
T 3jyo_A 207 P--AHPGTAFDVSC-----LTKDHWVGDVVYMP 232 (283)
T ss_dssp T--TSCSCSSCGGG-----CCTTCEEEECCCSS
T ss_pred C--CCCCCCCCHHH-----hCCCCEEEEecCCC
Confidence 1 1100011 112 22456888987765
No 266
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.89 E-value=6.2e-06 Score=70.68 Aligned_cols=70 Identities=19% Similarity=0.245 Sum_probs=49.1
Q ss_pred CCCCCCeEEEEcc-chhhHHHHHHHHh-CCCeEE-EEeCChhHH--HHH------HhCCCCCcCCHHHHhhcCCEEEEeC
Q 021213 1 MLFFDQSVGFIGL-GNMGFRMASNLMK-AGYKMA-VHDVNCNVM--KMF------SDMGVPTKETPFEVAEASDVVITML 69 (316)
Q Consensus 1 ~~~~~~~IgiiG~-G~mG~~la~~l~~-~g~~V~-~~~r~~~~~--~~l------~~~g~~~~~~~~~~~~~adivi~~v 69 (316)
|.+.+|||+|+|+ |.||..+++.+.+ .++++. ++++++++. ..+ ...++...++++++++++|+||-++
T Consensus 1 ~~~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft 80 (273)
T 1dih_A 1 MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFT 80 (273)
T ss_dssp -CCCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECS
T ss_pred CCCCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcC
Confidence 5655689999998 9999999998774 568876 778876431 111 1123445667788888899999655
Q ss_pred C
Q 021213 70 P 70 (316)
Q Consensus 70 p 70 (316)
+
T Consensus 81 ~ 81 (273)
T 1dih_A 81 R 81 (273)
T ss_dssp C
T ss_pred C
Confidence 3
No 267
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.88 E-value=5e-05 Score=63.39 Aligned_cols=68 Identities=18% Similarity=0.116 Sum_probs=52.1
Q ss_pred CCCCeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCC-C-----CcCCHHHHhhcCCEEEEeCC
Q 021213 3 FFDQSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGV-P-----TKETPFEVAEASDVVITMLP 70 (316)
Q Consensus 3 ~~~~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~-~-----~~~~~~~~~~~adivi~~vp 70 (316)
++.|+|.|.|+ |.+|..+++.|++.|++|++.+|++++.+.+.+.++ . ...+..++++++|+||.+..
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag 93 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAG 93 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCC
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCC
Confidence 45689999997 999999999999999999999999998887776554 2 12344555667777777643
No 268
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.87 E-value=5.2e-05 Score=66.96 Aligned_cols=70 Identities=19% Similarity=0.324 Sum_probs=53.4
Q ss_pred CCeEEEEccchhhHHHHHHHHhCC-CeE-EEEeCChhHHHHHHh-CC------------------CCCcCCHHHHhhcCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAG-YKM-AVHDVNCNVMKMFSD-MG------------------VPTKETPFEVAEASD 63 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g-~~V-~~~~r~~~~~~~l~~-~g------------------~~~~~~~~~~~~~ad 63 (316)
++||||+|+|.||..+++.|.+.. .++ .++|++++....+.+ .| +....++++++.++|
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vD 81 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVD 81 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCS
T ss_pred CcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCC
Confidence 369999999999999999998764 454 456887776655443 33 244568888888999
Q ss_pred EEEEeCCCChh
Q 021213 64 VVITMLPSSSH 74 (316)
Q Consensus 64 ivi~~vp~~~~ 74 (316)
+|++|+|...+
T Consensus 82 vV~~aTp~~~h 92 (334)
T 2czc_A 82 IIVDATPGGIG 92 (334)
T ss_dssp EEEECCSTTHH
T ss_pred EEEECCCcccc
Confidence 99999998754
No 269
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.87 E-value=3.7e-05 Score=67.31 Aligned_cols=66 Identities=18% Similarity=0.225 Sum_probs=49.6
Q ss_pred CeEEEEcc-chhhHHHHHHHHhCC--CeEEEEeCChhHH--HHHHhCC----CCC---cCCHHHHhhcCCEEEEeCCC
Q 021213 6 QSVGFIGL-GNMGFRMASNLMKAG--YKMAVHDVNCNVM--KMFSDMG----VPT---KETPFEVAEASDVVITMLPS 71 (316)
Q Consensus 6 ~~IgiiG~-G~mG~~la~~l~~~g--~~V~~~~r~~~~~--~~l~~~g----~~~---~~~~~~~~~~adivi~~vp~ 71 (316)
|||+|||+ |.+|.+++..|+..| ++|.++|+++... ..+.+.. +.. +++.++++++||+||++...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~ 78 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGV 78 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCc
Confidence 69999998 999999999999988 7999999987322 2233321 111 24677889999999998643
No 270
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.86 E-value=4.7e-05 Score=69.46 Aligned_cols=67 Identities=22% Similarity=0.423 Sum_probs=51.9
Q ss_pred CCCeEEEEccchhhHHHHHHHHhC----------CCe-EEEEeCChhHHHHHHhCCCCCcCCHHHHhh--cCCEEEEeCC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKA----------GYK-MAVHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITMLP 70 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~----------g~~-V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~adivi~~vp 70 (316)
.+.||||||+|.||+.+++.|.++ +.+ +.+++|++++.+.+. .+....++.+++++ +.|+|+.|+|
T Consensus 9 k~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~-~~~~~~~d~~ell~d~diDvVve~tp 87 (444)
T 3mtj_A 9 KPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALA-GGLPLTTNPFDVVDDPEIDIVVELIG 87 (444)
T ss_dssp SCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHH-TTCCEESCTHHHHTCTTCCEEEECCC
T ss_pred CcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhc-ccCcccCCHHHHhcCCCCCEEEEcCC
Confidence 346899999999999999877642 344 346799988876663 35667889999986 4799999998
Q ss_pred C
Q 021213 71 S 71 (316)
Q Consensus 71 ~ 71 (316)
.
T Consensus 88 ~ 88 (444)
T 3mtj_A 88 G 88 (444)
T ss_dssp S
T ss_pred C
Confidence 6
No 271
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.86 E-value=2.3e-05 Score=67.32 Aligned_cols=68 Identities=12% Similarity=0.209 Sum_probs=50.0
Q ss_pred CCCeEEEEc-cchhhHHHHHHHHhC-CCeEE-EEeCChhH-----HHHHH---hCCCCCcCCHHHHhhcCCEEEEeCCC
Q 021213 4 FDQSVGFIG-LGNMGFRMASNLMKA-GYKMA-VHDVNCNV-----MKMFS---DMGVPTKETPFEVAEASDVVITMLPS 71 (316)
Q Consensus 4 ~~~~IgiiG-~G~mG~~la~~l~~~-g~~V~-~~~r~~~~-----~~~l~---~~g~~~~~~~~~~~~~adivi~~vp~ 71 (316)
+++||+|+| +|+||..+++.+.+. +.++. +++++++. +..+. ..|+..++++++++.++|+||-+++.
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~p 98 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQP 98 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSCH
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCCH
Confidence 447999999 999999999998754 56644 56886431 11121 24677888999999999999988753
No 272
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=97.83 E-value=2.9e-05 Score=68.29 Aligned_cols=65 Identities=18% Similarity=0.282 Sum_probs=49.9
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC--eEEEEeCChhHHHH----HHhC----C---CCCcCCHHHHhhcCCEEEEeCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKM----FSDM----G---VPTKETPFEVAEASDVVITMLP 70 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~--~V~~~~r~~~~~~~----l~~~----g---~~~~~~~~~~~~~adivi~~vp 70 (316)
.+||+|||+|.||.+++..|+..|+ +|.++|++.++++. +.+. . +..+.+.+ .+++||+||++..
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~aG 96 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIITAG 96 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEccC
Confidence 4799999999999999999999987 89999999876544 3321 1 12234554 6899999999753
No 273
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=97.80 E-value=2.5e-05 Score=68.25 Aligned_cols=67 Identities=18% Similarity=0.208 Sum_probs=51.0
Q ss_pred CeEEEEccchhhHHHHHHHHhCC--CeEEEEeCChhHHHH----HHhC-----CCCCcCCHHHHhhcCCEEEEeCCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAG--YKMAVHDVNCNVMKM----FSDM-----GVPTKETPFEVAEASDVVITMLPSS 72 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g--~~V~~~~r~~~~~~~----l~~~-----g~~~~~~~~~~~~~adivi~~vp~~ 72 (316)
|||+|||+|.+|.+++..|+..+ .++.++|+++++++. +.+. ......+..+++++||+||++.+.+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~ 78 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVA 78 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCC
Confidence 69999999999999999999887 689999999877653 2221 1222224467789999999986543
No 274
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.78 E-value=1.9e-05 Score=72.84 Aligned_cols=69 Identities=17% Similarity=0.371 Sum_probs=54.4
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh-CCCC---C-cCCH---HHH-hhcCCEEEEeCCCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-MGVP---T-KETP---FEV-AEASDVVITMLPSSS 73 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~-~g~~---~-~~~~---~~~-~~~adivi~~vp~~~ 73 (316)
.|||-|+|+|.+|..+|+.|.+.||+|++.|+++++++.+.+ .++. . .+++ .++ +++||++|.+++++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~De 80 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTDE 80 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCChH
Confidence 589999999999999999999999999999999999988875 3432 1 1222 222 468999988887653
No 275
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=97.77 E-value=2.1e-05 Score=68.44 Aligned_cols=88 Identities=19% Similarity=0.138 Sum_probs=61.4
Q ss_pred CCeEEEEccchh-hHHHHHHHHhCCCeEEEEeCChhHH----HHHHhCCCCC------c--CCHHHHhhcCCEEEEeCCC
Q 021213 5 DQSVGFIGLGNM-GFRMASNLMKAGYKMAVHDVNCNVM----KMFSDMGVPT------K--ETPFEVAEASDVVITMLPS 71 (316)
Q Consensus 5 ~~~IgiiG~G~m-G~~la~~l~~~g~~V~~~~r~~~~~----~~l~~~g~~~------~--~~~~~~~~~adivi~~vp~ 71 (316)
..++.|||.|.| |..+|+.|...|.+|+++||+..+. +.+... ... + .++.+.++++|+||.+++.
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~-~~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~ 255 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLN-KHHVEDLGEYSEDLLKKCSLDSDVVITGVPS 255 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCC-CCEEEEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhh-cccccccccccHhHHHHHhccCCEEEECCCC
Confidence 478999999976 9999999999999999999984322 111111 111 1 4577888999999999986
Q ss_pred ChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCC
Q 021213 72 SSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTI 104 (316)
Q Consensus 72 ~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~ 104 (316)
+. -++. .+.+ .++.++||.+..
T Consensus 256 p~----~vI~--~e~v-----k~GavVIDVgi~ 277 (320)
T 1edz_A 256 EN----YKFP--TEYI-----KEGAVCINFACT 277 (320)
T ss_dssp TT----CCBC--TTTS-----CTTEEEEECSSS
T ss_pred Cc----ceeC--HHHc-----CCCeEEEEcCCC
Confidence 42 1122 1223 356899999875
No 276
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=97.76 E-value=3.2e-05 Score=67.52 Aligned_cols=65 Identities=18% Similarity=0.285 Sum_probs=49.3
Q ss_pred eEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHH----HHh------CCCCC--cCCHHHHhhcCCEEEEeCCCC
Q 021213 7 SVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKM----FSD------MGVPT--KETPFEVAEASDVVITMLPSS 72 (316)
Q Consensus 7 ~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~----l~~------~g~~~--~~~~~~~~~~adivi~~vp~~ 72 (316)
||+|||+|.||.+++..++..++ +|.++|+++++++. +.+ ...+. +.+. +++++||+||++.+.+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~ 78 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIG 78 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCC
Confidence 79999999999999999998887 79999999876543 121 12222 2455 6789999999985543
No 277
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.76 E-value=3.7e-05 Score=66.09 Aligned_cols=66 Identities=14% Similarity=0.189 Sum_probs=52.4
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCc----CCHHHHhhcCCEEEEeCCC
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTK----ETPFEVAEASDVVITMLPS 71 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~----~~~~~~~~~adivi~~vp~ 71 (316)
|+|||.|.|+|.+|+.++..|.+.||+|++.+|++++.+.+...++... .+++ ++++|+||-+...
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~ 73 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAP 73 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCCc
Confidence 4579999999999999999999999999999999998877776553211 1222 6789999997643
No 278
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=97.74 E-value=5.6e-05 Score=62.16 Aligned_cols=65 Identities=15% Similarity=0.215 Sum_probs=50.7
Q ss_pred CeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCC-----CcCCHHHHhhcCCEEEEeCCC
Q 021213 6 QSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP-----TKETPFEVAEASDVVITMLPS 71 (316)
Q Consensus 6 ~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~-----~~~~~~~~~~~adivi~~vp~ 71 (316)
|||.|.| .|.+|..+++.|++.|++|++.+|++++.+.+. .++. ..+...+.+..+|+||.+...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence 6899999 599999999999999999999999998877664 3321 222112677889999998654
No 279
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=97.73 E-value=0.0001 Score=62.46 Aligned_cols=75 Identities=13% Similarity=0.244 Sum_probs=58.6
Q ss_pred CCeEEEEccch-hhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 5 DQSVGFIGLGN-MGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 5 ~~~IgiiG~G~-mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
.+++.|||.|. +|.+++..|.+.|.+|++++++ +.++++.+++||+||.+++.+.- +.
T Consensus 150 Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~--------------t~~L~~~~~~ADIVI~Avg~p~~-----I~-- 208 (276)
T 3ngx_A 150 ENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK--------------TKDIGSMTRSSKIVVVAVGRPGF-----LN-- 208 (276)
T ss_dssp SCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------CSCHHHHHHHSSEEEECSSCTTC-----BC--
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC--------------cccHHHhhccCCEEEECCCCCcc-----cc--
Confidence 46899999986 8999999999999999999874 25678889999999999986531 21
Q ss_pred CCcccCCCCCCCeEEEEcCCCC
Q 021213 84 NGLLQGGNSVRPQLLIDSSTID 105 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~ 105 (316)
...+ .++.++||.+...
T Consensus 209 ~~~v-----k~GavVIDvgi~~ 225 (276)
T 3ngx_A 209 REMV-----TPGSVVIDVGINY 225 (276)
T ss_dssp GGGC-----CTTCEEEECCCEE
T ss_pred Hhhc-----cCCcEEEEeccCc
Confidence 1223 2567999988653
No 280
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=97.72 E-value=0.00024 Score=62.52 Aligned_cols=116 Identities=13% Similarity=0.090 Sum_probs=71.1
Q ss_pred CCeEEEEccchhhHH-HHHHHHhCCCeEEEEeCCh--hHHHHHHhCCCCCc--CCHHHHh-hcCCEEEEe--CCCChhhH
Q 021213 5 DQSVGFIGLGNMGFR-MASNLMKAGYKMAVHDVNC--NVMKMFSDMGVPTK--ETPFEVA-EASDVVITM--LPSSSHQV 76 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~-la~~l~~~g~~V~~~~r~~--~~~~~l~~~g~~~~--~~~~~~~-~~adivi~~--vp~~~~~~ 76 (316)
++||.|||.|.+|.+ +|+.|.+.|++|+++|+++ ...+.+.+.|+... .+++++. .++|+||.. +|.+...+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCTTCHHH
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCCCCHHH
Confidence 368999999999995 9999999999999999864 35667888887654 3455554 479999984 65443214
Q ss_pred HHHhcCCCCcc------cCCCCCCCeEEEEcCCCC-HHHHHHHHHHHhhch
Q 021213 77 LDVYNGPNGLL------QGGNSVRPQLLIDSSTID-PQTSRNISAAVSNCI 120 (316)
Q Consensus 77 ~~v~~~~~~~~------~~~~~~~~~~vi~~st~~-~~~~~~l~~~~~~~~ 120 (316)
....+.--+++ ........++|-.+.|.. ..++.-+...+...+
T Consensus 84 ~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g 134 (326)
T 3eag_A 84 EAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAG 134 (326)
T ss_dssp HHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcC
Confidence 43322111111 100001223444454444 555556666666543
No 281
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.71 E-value=1.7e-05 Score=66.56 Aligned_cols=95 Identities=20% Similarity=0.234 Sum_probs=63.6
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeE-EEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKM-AVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V-~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
.|+|+++|+|+||..+++. . ++++ .+|+ ++...+ |+..++|++++++++|+|+.|-+.. + +++.+.
T Consensus 12 ~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~---~k~gel---gv~a~~d~d~lla~pD~VVe~A~~~-a-v~e~~~-- 78 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD---RISKDI---PGVVRLDEFQVPSDVSTVVECASPE-A-VKEYSL-- 78 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH--S-CCSEEEEEC---SSCCCC---SSSEECSSCCCCTTCCEEEECSCHH-H-HHHHHH--
T ss_pred cceEEEECcCHHHHHHHhc--C-CcEEEEEEe---cccccc---CceeeCCHHHHhhCCCEEEECCCHH-H-HHHHHH--
Confidence 4899999999999999998 4 7775 5677 333322 6777788998888999999998543 3 565332
Q ss_pred CCcccCCCCCCCeEEEEcCCC---CHHHHHHHHHHHhh
Q 021213 84 NGLLQGGNSVRPQLLIDSSTI---DPQTSRNISAAVSN 118 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~---~~~~~~~l~~~~~~ 118 (316)
.+++ .+.-++.+|.+ .+...+++.+...+
T Consensus 79 -~iL~-----aG~dvv~~S~gaLad~~l~~~L~~aA~~ 110 (253)
T 1j5p_A 79 -QILK-----NPVNYIIISTSAFADEVFRERFFSELKN 110 (253)
T ss_dssp -HHTT-----SSSEEEECCGGGGGSHHHHHHHHHHHHT
T ss_pred -HHHH-----CCCCEEEcChhhhcCHHHHHHHHHHHHH
Confidence 2343 34455555544 34444555555544
No 282
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.70 E-value=1.8e-05 Score=66.23 Aligned_cols=68 Identities=12% Similarity=0.099 Sum_probs=47.8
Q ss_pred CCCeEEEEc-cchhhHHHHHHHHhCC-CeEEEEeCChhHHHHHHhCCC-----CC--cCCHHHHhhcCCEEEEeCCC
Q 021213 4 FDQSVGFIG-LGNMGFRMASNLMKAG-YKMAVHDVNCNVMKMFSDMGV-----PT--KETPFEVAEASDVVITMLPS 71 (316)
Q Consensus 4 ~~~~IgiiG-~G~mG~~la~~l~~~g-~~V~~~~r~~~~~~~l~~~g~-----~~--~~~~~~~~~~adivi~~vp~ 71 (316)
|+|+|.|.| .|.+|..+++.|++.| ++|++++|++++.+.+...++ .. ..+..++++.+|+||.+...
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~ 98 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTG 98 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCS
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Confidence 346799998 7999999999999999 899999999876543322221 11 11234456677888776543
No 283
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.69 E-value=2.7e-05 Score=65.13 Aligned_cols=67 Identities=15% Similarity=0.118 Sum_probs=53.0
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCC----cCCHH---HH-hhcCCEEEEeCCCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPT----KETPF---EV-AEASDVVITMLPSSS 73 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~----~~~~~---~~-~~~adivi~~vp~~~ 73 (316)
.++|.|+|+|.+|..+++.|.+.|+ |+++++++++++.+. .|+.. .++.+ ++ ++++|.||++++++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~ 83 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDS 83 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHH
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcH
Confidence 4789999999999999999999999 999999999888776 55332 12332 22 568999999998764
No 284
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.68 E-value=2.7e-05 Score=66.90 Aligned_cols=66 Identities=15% Similarity=0.060 Sum_probs=51.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHHhCC-CCCcCCHHHHhhcCCEEEEeCCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMG-VPTKETPFEVAEASDVVITMLPSS 72 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~~~g-~~~~~~~~~~~~~adivi~~vp~~ 72 (316)
.+++.|+|+|.+|.+++..|.+.|. +|++++|++++.+.+.+.- .....+..+ + ++|+||-|+|..
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~G 189 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKG 189 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccC
Confidence 4689999999999999999999997 8999999999988876531 111112223 3 799999999864
No 285
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.67 E-value=5.4e-05 Score=65.33 Aligned_cols=105 Identities=18% Similarity=0.158 Sum_probs=68.7
Q ss_pred CCeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhh--cCCEEEEeCCCChhhHHHHhc
Q 021213 5 DQSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITMLPSSSHQVLDVYN 81 (316)
Q Consensus 5 ~~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~adivi~~vp~~~~~~~~v~~ 81 (316)
.+||+|+|+ |+||..+++.+.+.|++ .++..+|.+... .-.|+....|++++.+ .+|++++++|... ..+++.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~-~v~~VnP~~~g~-~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~~~--~~~~~~ 82 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTK-IVAGVTPGKGGM-EVLGVPVYDTVKEAVAHHEVDASIIFVPAPA--AADAAL 82 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTC-EETTEEEESSHHHHHHHSCCSEEEECCCHHH--HHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCe-EEEEECCCCCCc-eECCEEeeCCHHHHhhcCCCCEEEEecCHHH--HHHHHH
Confidence 478999998 99999999999998998 334444443100 1247777889999988 8999999999765 455554
Q ss_pred CCCCcccCCCCCCCeEEEEcCCCC-HHHHHHHHHHHhhch
Q 021213 82 GPNGLLQGGNSVRPQLLIDSSTID-PQTSRNISAAVSNCI 120 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~~vi~~st~~-~~~~~~l~~~~~~~~ 120 (316)
+. ++. +-+.+|..+++. ....+++.+...+.+
T Consensus 83 ea---~~~----Gi~~vVi~t~G~~~~~~~~l~~~a~~~g 115 (288)
T 1oi7_A 83 EA---AHA----GIPLIVLITEGIPTLDMVRAVEEIKALG 115 (288)
T ss_dssp HH---HHT----TCSEEEECCSCCCHHHHHHHHHHHHHHT
T ss_pred HH---HHC----CCCEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 32 221 112344555554 334456666555543
No 286
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.67 E-value=9e-05 Score=61.12 Aligned_cols=42 Identities=7% Similarity=0.152 Sum_probs=35.8
Q ss_pred CCCeEEEEc-cchhhHHHHHHHH-hCCCeEEEEeCChh-HHHHHH
Q 021213 4 FDQSVGFIG-LGNMGFRMASNLM-KAGYKMAVHDVNCN-VMKMFS 45 (316)
Q Consensus 4 ~~~~IgiiG-~G~mG~~la~~l~-~~g~~V~~~~r~~~-~~~~l~ 45 (316)
|+++|.|.| .|.+|..+++.|+ +.|++|++.+|+++ +.+.+.
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~ 48 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI 48 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc
Confidence 334599999 6999999999999 89999999999988 766553
No 287
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=97.67 E-value=0.00011 Score=63.08 Aligned_cols=74 Identities=18% Similarity=0.241 Sum_probs=57.1
Q ss_pred CCeEEEEccch-hhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHH--HHhhcCCEEEEeCCCChhhHHHHhc
Q 021213 5 DQSVGFIGLGN-MGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPF--EVAEASDVVITMLPSSSHQVLDVYN 81 (316)
Q Consensus 5 ~~~IgiiG~G~-mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~--~~~~~adivi~~vp~~~~~~~~v~~ 81 (316)
.+++.|||.|. +|.+++..|.+.|.+|+++++... +++ +.+++||+||.+++.+.- +.
T Consensus 165 Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~--------------~l~l~~~~~~ADIVI~Avg~p~~-----I~ 225 (300)
T 4a26_A 165 GKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS--------------TEDMIDYLRTADIVIAAMGQPGY-----VK 225 (300)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC--------------HHHHHHHHHTCSEEEECSCCTTC-----BC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC--------------CchhhhhhccCCEEEECCCCCCC-----Cc
Confidence 46899999987 799999999999999999998433 344 778999999999986531 11
Q ss_pred CCCCcccCCCCCCCeEEEEcCCC
Q 021213 82 GPNGLLQGGNSVRPQLLIDSSTI 104 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~~vi~~st~ 104 (316)
...+ .++.++||.+..
T Consensus 226 --~~~v-----k~GavVIDvgi~ 241 (300)
T 4a26_A 226 --GEWI-----KEGAAVVDVGTT 241 (300)
T ss_dssp --GGGS-----CTTCEEEECCCE
T ss_pred --HHhc-----CCCcEEEEEecc
Confidence 1223 356799999865
No 288
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.67 E-value=1.1e-05 Score=66.41 Aligned_cols=68 Identities=19% Similarity=0.243 Sum_probs=46.3
Q ss_pred CeEEEEccchhhHHHHHH--HHhCCCeEE-EEeCChhHHHHHHh-CCCCCcCCHHHHhhcCCEEEEeCCCCh
Q 021213 6 QSVGFIGLGNMGFRMASN--LMKAGYKMA-VHDVNCNVMKMFSD-MGVPTKETPFEVAEASDVVITMLPSSS 73 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~--l~~~g~~V~-~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~adivi~~vp~~~ 73 (316)
++|+|||+|++|..+++. +...|+++. ++|+++++...... .++...+++++++++.|++++|+|+..
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs~~ 157 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPAVA 157 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCHHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCchh
Confidence 689999999999999994 445577655 67999887643222 123345677888766699999999754
No 289
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.67 E-value=0.00011 Score=64.72 Aligned_cols=69 Identities=12% Similarity=0.244 Sum_probs=51.1
Q ss_pred CCCCCCeEEEEcc-chhhHHHHHHHHhCCC-------eEEEEeCC----hhHHH----HHHhCC------CCCcCCHHHH
Q 021213 1 MLFFDQSVGFIGL-GNMGFRMASNLMKAGY-------KMAVHDVN----CNVMK----MFSDMG------VPTKETPFEV 58 (316)
Q Consensus 1 ~~~~~~~IgiiG~-G~mG~~la~~l~~~g~-------~V~~~~r~----~~~~~----~l~~~g------~~~~~~~~~~ 58 (316)
|...+|||+|+|+ |.+|..++..|+..|+ +|.++|++ .++.+ .+.+.. +...++..++
T Consensus 1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
T 1b8p_A 1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA 80 (329)
T ss_dssp --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence 4344689999998 9999999999998885 89999998 54443 233321 2223677889
Q ss_pred hhcCCEEEEeC
Q 021213 59 AEASDVVITML 69 (316)
Q Consensus 59 ~~~adivi~~v 69 (316)
+++||+||.+.
T Consensus 81 l~~aD~Vi~~a 91 (329)
T 1b8p_A 81 FKDADVALLVG 91 (329)
T ss_dssp TTTCSEEEECC
T ss_pred hCCCCEEEEeC
Confidence 99999999974
No 290
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=97.63 E-value=0.00016 Score=59.53 Aligned_cols=66 Identities=12% Similarity=0.092 Sum_probs=51.1
Q ss_pred CeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCC-----CcCCHHHHhhcCCEEEEeCCC
Q 021213 6 QSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP-----TKETPFEVAEASDVVITMLPS 71 (316)
Q Consensus 6 ~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~-----~~~~~~~~~~~adivi~~vp~ 71 (316)
|||.|.|+ |.+|..+++.|++.|++|++.+|++++.+.+...++. ..+...++++++|+||.+...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 68999987 9999999999999999999999999888766544432 112112667789999887643
No 291
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.63 E-value=0.00011 Score=64.17 Aligned_cols=68 Identities=7% Similarity=0.046 Sum_probs=52.9
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCC---hhHHHHHHhC-----CC--CC--cCC---HHHHhhcCCEEEEe
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVN---CNVMKMFSDM-----GV--PT--KET---PFEVAEASDVVITM 68 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~---~~~~~~l~~~-----g~--~~--~~~---~~~~~~~adivi~~ 68 (316)
.+++.|+|+|.+|.+++..|++.|. +|++++|+ .++++.+.+. +. .. .++ ..+.+.++|+||-|
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIINa 233 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNA 233 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEEC
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEEC
Confidence 4689999999999999999999998 89999999 7777666531 21 11 122 34567789999999
Q ss_pred CCCC
Q 021213 69 LPSS 72 (316)
Q Consensus 69 vp~~ 72 (316)
+|..
T Consensus 234 Tp~G 237 (315)
T 3tnl_A 234 TGVG 237 (315)
T ss_dssp SSTT
T ss_pred ccCC
Confidence 9865
No 292
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=97.61 E-value=0.0003 Score=64.79 Aligned_cols=115 Identities=18% Similarity=0.179 Sum_probs=70.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCCh----hHHHHHHhCCCCCc--CCHHHHhhc-CCEEEEe--CCCChhh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC----NVMKMFSDMGVPTK--ETPFEVAEA-SDVVITM--LPSSSHQ 75 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~----~~~~~l~~~g~~~~--~~~~~~~~~-adivi~~--vp~~~~~ 75 (316)
.++|.|||+|..|.+.|+.|.+.|++|+++|+++ ...+.+.+.|+... ..+.+.+++ +|+||++ +|.+...
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~~~p~ 88 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYNNPM 88 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCTTSHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCCCChh
Confidence 4789999999999999999999999999999854 34567777887543 233445566 8999985 5544321
Q ss_pred HHHHhcCCCCcccCC----CCCCCeEEEEcCCCC-HHHHHHHHHHHhhc
Q 021213 76 VLDVYNGPNGLLQGG----NSVRPQLLIDSSTID-PQTSRNISAAVSNC 119 (316)
Q Consensus 76 ~~~v~~~~~~~~~~~----~~~~~~~vi~~st~~-~~~~~~l~~~~~~~ 119 (316)
+......--+++... ...+..+|-.+.|.. ..++.-+...+...
T Consensus 89 ~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~ 137 (451)
T 3lk7_A 89 VKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAG 137 (451)
T ss_dssp HHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhc
Confidence 333322111122100 011234444454444 55555566666554
No 293
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=97.59 E-value=7e-05 Score=66.39 Aligned_cols=89 Identities=15% Similarity=0.163 Sum_probs=55.3
Q ss_pred CCeEEEEc-cchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHHh-----CC--CCCcCCHHHHhhcCCEEEEeCCCChhh
Q 021213 5 DQSVGFIG-LGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSD-----MG--VPTKETPFEVAEASDVVITMLPSSSHQ 75 (316)
Q Consensus 5 ~~~IgiiG-~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~~-----~g--~~~~~~~~~~~~~adivi~~vp~~~~~ 75 (316)
++||+|+| .|++|..+.+.|.++.+ ++....+..+.-..+.+ .| -....+.++ +.++|+||+|+|....
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~~~s- 81 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPHGVF- 81 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCTTHH-
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCcHHH-
Confidence 47999999 69999999999987764 76665543322111211 01 111223334 4789999999998764
Q ss_pred HHHHhcCCCCcccCCCCCCCeEEEEcCCC
Q 021213 76 VLDVYNGPNGLLQGGNSVRPQLLIDSSTI 104 (316)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~vi~~st~ 104 (316)
.+.... +++ .+..+||.|+-
T Consensus 82 -~~~a~~---~~~-----aG~~VId~Sa~ 101 (345)
T 2ozp_A 82 -AREFDR---YSA-----LAPVLVDLSAD 101 (345)
T ss_dssp -HHTHHH---HHT-----TCSEEEECSST
T ss_pred -HHHHHH---HHH-----CCCEEEEcCcc
Confidence 443322 222 45578888874
No 294
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.57 E-value=0.00012 Score=66.55 Aligned_cols=67 Identities=12% Similarity=0.144 Sum_probs=52.0
Q ss_pred CeEEEEccchhhHHHHHHHHhCCC---eEEEEeCChhHHHHHHhC-------CCC-----C--cCCHHHHhhc--CCEEE
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGY---KMAVHDVNCNVMKMFSDM-------GVP-----T--KETPFEVAEA--SDVVI 66 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~---~V~~~~r~~~~~~~l~~~-------g~~-----~--~~~~~~~~~~--adivi 66 (316)
+||.|+|+|.+|..+++.|++.|. +|++++|++++.+.+.+. .+. . ..+.++++++ +|+||
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 589999999999999999999983 899999999988776542 121 1 1234556666 89999
Q ss_pred EeCCCC
Q 021213 67 TMLPSS 72 (316)
Q Consensus 67 ~~vp~~ 72 (316)
.|+|..
T Consensus 82 n~ag~~ 87 (405)
T 4ina_A 82 NIALPY 87 (405)
T ss_dssp ECSCGG
T ss_pred ECCCcc
Confidence 998764
No 295
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=97.55 E-value=0.00018 Score=64.09 Aligned_cols=89 Identities=13% Similarity=0.150 Sum_probs=56.1
Q ss_pred CCeEEEEc-cchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHHh-----CCC---CC-cCCHHHHhhcCCEEEEeCCCCh
Q 021213 5 DQSVGFIG-LGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSD-----MGV---PT-KETPFEVAEASDVVITMLPSSS 73 (316)
Q Consensus 5 ~~~IgiiG-~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~~-----~g~---~~-~~~~~~~~~~adivi~~vp~~~ 73 (316)
++||+|+| .|++|..+.+.|.++.+ ++.......+.-..+.+ .+. .. ..+ ++.++++|+||+|+|...
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~atp~~~ 94 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPHGT 94 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECCCTTT
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcCCchh
Confidence 47999999 89999999999998764 76666543322111111 111 11 112 444568999999999876
Q ss_pred hhHHHHhcCCCCcccCCCCCCCeEEEEcCCCC
Q 021213 74 HQVLDVYNGPNGLLQGGNSVRPQLLIDSSTID 105 (316)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~ 105 (316)
+ .+..... + .+..+||.|+..
T Consensus 95 s--~~~a~~~----~-----aG~~VId~sa~~ 115 (359)
T 1xyg_A 95 T--QEIIKEL----P-----TALKIVDLSADF 115 (359)
T ss_dssp H--HHHHHTS----C-----TTCEEEECSSTT
T ss_pred H--HHHHHHH----h-----CCCEEEECCccc
Confidence 4 4444322 2 345789988754
No 296
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=97.55 E-value=0.00028 Score=59.96 Aligned_cols=74 Identities=14% Similarity=0.169 Sum_probs=57.7
Q ss_pred CCeEEEEccchh-hHHHHHHHHhC--CCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhc
Q 021213 5 DQSVGFIGLGNM-GFRMASNLMKA--GYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYN 81 (316)
Q Consensus 5 ~~~IgiiG~G~m-G~~la~~l~~~--g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~ 81 (316)
.+++.|||.|.+ |.+++..|... |..|++++++. .++.+.++++|+||.+++.+.- +.
T Consensus 158 gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t--------------~~L~~~~~~ADIVI~Avg~p~~-----I~ 218 (281)
T 2c2x_A 158 GAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT--------------RDLPALTRQADIVVAAVGVAHL-----LT 218 (281)
T ss_dssp TCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC--------------SCHHHHHTTCSEEEECSCCTTC-----BC
T ss_pred CCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch--------------hHHHHHHhhCCEEEECCCCCcc-----cC
Confidence 478999999985 99999999999 88999998754 4678888999999999986531 21
Q ss_pred CCCCcccCCCCCCCeEEEEcCCC
Q 021213 82 GPNGLLQGGNSVRPQLLIDSSTI 104 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~~vi~~st~ 104 (316)
.+.+ .++.++||.+..
T Consensus 219 --~~~v-----k~GavVIDVgi~ 234 (281)
T 2c2x_A 219 --ADMV-----RPGAAVIDVGVS 234 (281)
T ss_dssp --GGGS-----CTTCEEEECCEE
T ss_pred --HHHc-----CCCcEEEEccCC
Confidence 1223 256799998864
No 297
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=97.54 E-value=0.00047 Score=58.73 Aligned_cols=74 Identities=19% Similarity=0.223 Sum_probs=58.1
Q ss_pred CCeEEEEccch-hhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 5 DQSVGFIGLGN-MGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 5 ~~~IgiiG~G~-mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
..++.|||.|. +|.+++..|...|..|++++++. .++.+.++++|+||.+++.+. ++.
T Consensus 159 gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------~~L~~~~~~ADIVI~Avg~p~-----lI~-- 217 (288)
T 1b0a_A 159 GLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT--------------KNLRHHVENADLLIVAVGKPG-----FIP-- 217 (288)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC--------------SCHHHHHHHCSEEEECSCCTT-----CBC--
T ss_pred CCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHHhccCCEEEECCCCcC-----cCC--
Confidence 47899999997 69999999999999999998653 467788899999999998653 121
Q ss_pred CCcccCCCCCCCeEEEEcCCC
Q 021213 84 NGLLQGGNSVRPQLLIDSSTI 104 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~ 104 (316)
.+++ .++.++||.+..
T Consensus 218 ~~~v-----k~GavVIDVgi~ 233 (288)
T 1b0a_A 218 GDWI-----KEGAIVIDVGIN 233 (288)
T ss_dssp TTTS-----CTTCEEEECCCE
T ss_pred HHHc-----CCCcEEEEccCC
Confidence 1223 356799998864
No 298
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=97.53 E-value=0.00038 Score=59.68 Aligned_cols=75 Identities=11% Similarity=0.110 Sum_probs=59.3
Q ss_pred CCeEEEEccch-hhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 5 DQSVGFIGLGN-MGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 5 ~~~IgiiG~G~-mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
..++.|||.|. +|.+++..|...|..|++++++ +.++.+.+++||+||.+++.+.- +.
T Consensus 165 gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~--------------t~~L~~~~~~ADIVI~Avg~p~~-----I~-- 223 (301)
T 1a4i_A 165 GRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK--------------TAHLDEEVNKGDILVVATGQPEM-----VK-- 223 (301)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------CSSHHHHHTTCSEEEECCCCTTC-----BC--
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC--------------cccHHHHhccCCEEEECCCCccc-----CC--
Confidence 47899999996 7999999999999999999864 25678888999999999986531 21
Q ss_pred CCcccCCCCCCCeEEEEcCCCC
Q 021213 84 NGLLQGGNSVRPQLLIDSSTID 105 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~ 105 (316)
.+++ .++.++||.+...
T Consensus 224 ~~~v-----k~GavVIDVgi~~ 240 (301)
T 1a4i_A 224 GEWI-----KPGAIVIDCGINY 240 (301)
T ss_dssp GGGS-----CTTCEEEECCCBC
T ss_pred HHHc-----CCCcEEEEccCCC
Confidence 1223 2578999999865
No 299
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=97.53 E-value=0.00013 Score=64.48 Aligned_cols=69 Identities=20% Similarity=0.319 Sum_probs=49.2
Q ss_pred CeEEEEccchhhHHHHHHHHhC-CCeEE-EEeCChhHHHHHHh-------------------CCCCCcCCHHHHhhcCCE
Q 021213 6 QSVGFIGLGNMGFRMASNLMKA-GYKMA-VHDVNCNVMKMFSD-------------------MGVPTKETPFEVAEASDV 64 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~-g~~V~-~~~r~~~~~~~l~~-------------------~g~~~~~~~~~~~~~adi 64 (316)
+||||+|+|++|..+++.|.++ +.++. +.++++.....+.. .++....++.+++.++|+
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDv 81 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI 81 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCE
Confidence 5899999999999999999874 45654 45776554433222 233333466777789999
Q ss_pred EEEeCCCChh
Q 021213 65 VITMLPSSSH 74 (316)
Q Consensus 65 vi~~vp~~~~ 74 (316)
||.|+|....
T Consensus 82 V~~atp~~~~ 91 (337)
T 1cf2_P 82 VIDCTPEGIG 91 (337)
T ss_dssp EEECCSTTHH
T ss_pred EEECCCchhh
Confidence 9999998753
No 300
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.53 E-value=0.0002 Score=62.42 Aligned_cols=68 Identities=9% Similarity=0.167 Sum_probs=53.0
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCC---hhHHHHHHh-----CCCC--C--cCCH---HHHhhcCCEEEEe
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVN---CNVMKMFSD-----MGVP--T--KETP---FEVAEASDVVITM 68 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~---~~~~~~l~~-----~g~~--~--~~~~---~~~~~~adivi~~ 68 (316)
.+++.|+|+|.+|.+++..|.+.|. +|++++|+ .++++.+.+ .+.. . ..+. .+.+.++|+||-|
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiIINa 227 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTNG 227 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEEEC
Confidence 4689999999999999999999997 89999999 777766653 1211 1 1233 4567789999999
Q ss_pred CCCC
Q 021213 69 LPSS 72 (316)
Q Consensus 69 vp~~ 72 (316)
+|..
T Consensus 228 Tp~G 231 (312)
T 3t4e_A 228 TKVG 231 (312)
T ss_dssp SSTT
T ss_pred CcCC
Confidence 9975
No 301
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=97.52 E-value=0.00042 Score=59.04 Aligned_cols=75 Identities=12% Similarity=0.147 Sum_probs=58.2
Q ss_pred CCeEEEEccch-hhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 5 DQSVGFIGLGN-MGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 5 ~~~IgiiG~G~-mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
.+++.|||.|. +|.+++..|...|..|++++++ +.++++.++++|+||.+++.+.- +.
T Consensus 161 Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~--------------t~~L~~~~~~ADIVI~Avg~p~~-----I~-- 219 (285)
T 3l07_A 161 GAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF--------------TTDLKSHTTKADILIVAVGKPNF-----IT-- 219 (285)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------CSSHHHHHTTCSEEEECCCCTTC-----BC--
T ss_pred CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC--------------chhHHHhcccCCEEEECCCCCCC-----CC--
Confidence 47899999988 7999999999999999999874 24677889999999999986431 21
Q ss_pred CCcccCCCCCCCeEEEEcCCCC
Q 021213 84 NGLLQGGNSVRPQLLIDSSTID 105 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~ 105 (316)
.+.+ .++.++||.+...
T Consensus 220 ~~~v-----k~GavVIDvgi~~ 236 (285)
T 3l07_A 220 ADMV-----KEGAVVIDVGINH 236 (285)
T ss_dssp GGGS-----CTTCEEEECCCEE
T ss_pred HHHc-----CCCcEEEEecccC
Confidence 1223 2567999988653
No 302
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.52 E-value=0.0005 Score=61.09 Aligned_cols=93 Identities=14% Similarity=0.126 Sum_probs=66.3
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCC----hhHH--------HHHHhC-C-CCCcCCHHHHhhcCCEEEEe
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVN----CNVM--------KMFSDM-G-VPTKETPFEVAEASDVVITM 68 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~----~~~~--------~~l~~~-g-~~~~~~~~~~~~~adivi~~ 68 (316)
...||.|+|+|.+|..+++.|...|. +|+++||+ .++. +.+.+. . .....++.|+++++|++|-+
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADVlIG~ 270 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADFFIGV 270 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSEEEEC
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCEEEEe
Confidence 35799999999999999999999997 89999998 5441 233332 1 22356799999999999987
Q ss_pred CCCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCCH
Q 021213 69 LPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDP 106 (316)
Q Consensus 69 vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~ 106 (316)
.....- .+++++.++ ++.+|+++|+-.|
T Consensus 271 Sap~l~-t~emVk~Ma---------~~pIIfalSNPt~ 298 (388)
T 1vl6_A 271 SRGNIL-KPEWIKKMS---------RKPVIFALANPVP 298 (388)
T ss_dssp SCSSCS-CHHHHTTSC---------SSCEEEECCSSSC
T ss_pred CCCCcc-CHHHHHhcC---------CCCEEEEcCCCCC
Confidence 542221 466666542 2348888887544
No 303
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.52 E-value=0.0012 Score=55.47 Aligned_cols=88 Identities=15% Similarity=0.263 Sum_probs=54.1
Q ss_pred CeEEEEcc-chhhHHHHHHHHhC-CCeEE-EEeCChhHHHHHHhCCCCCcCCHHHHhh-cCCEEEEeCCCChhhHHHHhc
Q 021213 6 QSVGFIGL-GNMGFRMASNLMKA-GYKMA-VHDVNCNVMKMFSDMGVPTKETPFEVAE-ASDVVITMLPSSSHQVLDVYN 81 (316)
Q Consensus 6 ~~IgiiG~-G~mG~~la~~l~~~-g~~V~-~~~r~~~~~~~l~~~g~~~~~~~~~~~~-~adivi~~vp~~~~~~~~v~~ 81 (316)
|||+|+|+ |.||..+++.+.+. ++++. +++++ +++++++. .+|+||-+++... +.+.+.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------~dl~~~~~~~~DvvIDfT~p~a--~~~~~~ 63 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------DPLSLLTDGNTEVVIDFTHPDV--VMGNLE 63 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---------------CCTHHHHHTTCCEEEECSCTTT--HHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---------------CCHHHHhccCCcEEEEccChHH--HHHHHH
Confidence 58999996 99999999998865 89876 55654 34555554 7999997664333 444442
Q ss_pred CCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHh
Q 021213 82 GPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVS 117 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~ 117 (316)
. .++ .+-.+|+-++...++..+.+.+...
T Consensus 64 ~---a~~----~g~~~VigTTG~~~e~~~~l~~aa~ 92 (245)
T 1p9l_A 64 F---LID----NGIHAVVGTTGFTAERFQQVESWLV 92 (245)
T ss_dssp H---HHH----TTCEEEECCCCCCHHHHHHHHHHHH
T ss_pred H---HHH----cCCCEEEcCCCCCHHHHHHHHHHHH
Confidence 1 121 1223444444344555555555444
No 304
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.52 E-value=0.00056 Score=56.47 Aligned_cols=68 Identities=15% Similarity=0.170 Sum_probs=51.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChh-HHHHHHhCC-CCC---cCCHHHHhhcCCEEEEeCCCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCN-VMKMFSDMG-VPT---KETPFEVAEASDVVITMLPSSS 73 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~-~~~~l~~~g-~~~---~~~~~~~~~~adivi~~vp~~~ 73 (316)
.++|.|||.|.+|..-++.|.+.|.+|++++++.. .++.+.+.+ +.. ..+ .+.++++|+||.|+.++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~-~~dL~~adLVIaAT~d~~ 103 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVG-EEDLLNVFFIVVATNDQA 103 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCC-GGGSSSCSEEEECCCCTH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCC-HhHhCCCCEEEECCCCHH
Confidence 47899999999999999999999999999987654 355565543 221 122 234678999999987654
No 305
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=97.51 E-value=8e-05 Score=66.05 Aligned_cols=89 Identities=15% Similarity=0.138 Sum_probs=56.1
Q ss_pred CCeEEEEc-cchhhHHHHHHHHhCC-----C-eEEEEeC--ChhH-HHH----HHh-CCCCCc-CCHHHHhhcCCEEEEe
Q 021213 5 DQSVGFIG-LGNMGFRMASNLMKAG-----Y-KMAVHDV--NCNV-MKM----FSD-MGVPTK-ETPFEVAEASDVVITM 68 (316)
Q Consensus 5 ~~~IgiiG-~G~mG~~la~~l~~~g-----~-~V~~~~r--~~~~-~~~----l~~-~g~~~~-~~~~~~~~~adivi~~ 68 (316)
+|||+|+| .|++|..+.+.|.+++ + +++...+ +..+ ... +.. ..+... .+. +.++++|+||+|
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~-~~~~~~DvVf~a 87 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEA-AVLGGHDAVFLA 87 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCH-HHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCH-HHhcCCCEEEEC
Confidence 46999999 9999999999999887 3 6666642 2211 211 111 112221 233 345689999999
Q ss_pred CCCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCC
Q 021213 69 LPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTID 105 (316)
Q Consensus 69 vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~ 105 (316)
+|.... +++.... + .+..+||.|+..
T Consensus 88 lg~~~s--~~~~~~~----~-----~G~~vIDlSa~~ 113 (352)
T 2nqt_A 88 LPHGHS--AVLAQQL----S-----PETLIIDCGADF 113 (352)
T ss_dssp CTTSCC--HHHHHHS----C-----TTSEEEECSSTT
T ss_pred CCCcch--HHHHHHH----h-----CCCEEEEECCCc
Confidence 998653 4544322 1 345888988765
No 306
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=97.51 E-value=8.7e-05 Score=60.20 Aligned_cols=37 Identities=19% Similarity=0.429 Sum_probs=33.8
Q ss_pred CCeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhHH
Q 021213 5 DQSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVM 41 (316)
Q Consensus 5 ~~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~~ 41 (316)
.|+|.|.|+ |.+|..+++.|.+.|++|++.+|++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~ 40 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL 40 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhc
Confidence 379999997 9999999999999999999999998754
No 307
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.51 E-value=0.00013 Score=63.19 Aligned_cols=103 Identities=15% Similarity=0.157 Sum_probs=69.0
Q ss_pred CeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhHH-HHHHhCCCCCcCCHHHHhh--cCCEEEEeCCCChhhHHHHhc
Q 021213 6 QSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVM-KMFSDMGVPTKETPFEVAE--ASDVVITMLPSSSHQVLDVYN 81 (316)
Q Consensus 6 ~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~~-~~l~~~g~~~~~~~~~~~~--~adivi~~vp~~~~~~~~v~~ 81 (316)
.+|.|+|+ |+||..+++.+.+.|++ .+|..+|.+. +. -.|+....|.+++.+ .+|++++++|... ..+++.
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~-~V~~VnP~~~g~~--i~G~~vy~sl~el~~~~~~Dv~ii~vp~~~--~~~~v~ 88 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTK-IVGGVTPGKGGQN--VHGVPVFDTVKEAVKETDANASVIFVPAPF--AKDAVF 88 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCC-EEEEECTTCTTCE--ETTEEEESSHHHHHHHHCCCEEEECCCHHH--HHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCe-EEEEeCCCCCCce--ECCEeeeCCHHHHhhcCCCCEEEEccCHHH--HHHHHH
Confidence 46888899 99999999999999998 5566655532 11 147777889999988 8999999999765 455544
Q ss_pred CCCCcccCCCCCCCeEEEEcCCCC-HHHHHHHHHHHhhch
Q 021213 82 GPNGLLQGGNSVRPQLLIDSSTID-PQTSRNISAAVSNCI 120 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~~vi~~st~~-~~~~~~l~~~~~~~~ 120 (316)
+. ++. +-+.+|..+++. ....+++.+..++.+
T Consensus 89 ea---~~~----Gi~~vVi~t~G~~~~~~~~l~~~A~~~g 121 (294)
T 2yv1_A 89 EA---IDA----GIELIVVITEHIPVHDTMEFVNYAEDVG 121 (294)
T ss_dssp HH---HHT----TCSEEEECCSCCCHHHHHHHHHHHHHHT
T ss_pred HH---HHC----CCCEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 32 221 223445555544 444556666665543
No 308
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.50 E-value=0.00016 Score=61.12 Aligned_cols=33 Identities=27% Similarity=0.504 Sum_probs=31.1
Q ss_pred CeEEEEccchhhHHHHHHHHhCCC-eEEEEeCCh
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNC 38 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~ 38 (316)
.+|.|||+|.+|+.++..|++.|. +|+++|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 689999999999999999999996 899999987
No 309
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=97.49 E-value=6.6e-05 Score=66.88 Aligned_cols=91 Identities=16% Similarity=0.230 Sum_probs=55.6
Q ss_pred CCCeEEEEc-cchhhHHHHHHHHhCC-CeEEEEeCChh----HHHHHHhC-----------CCCCc-CCHHHHhh-cCCE
Q 021213 4 FDQSVGFIG-LGNMGFRMASNLMKAG-YKMAVHDVNCN----VMKMFSDM-----------GVPTK-ETPFEVAE-ASDV 64 (316)
Q Consensus 4 ~~~~IgiiG-~G~mG~~la~~l~~~g-~~V~~~~r~~~----~~~~l~~~-----------g~~~~-~~~~~~~~-~adi 64 (316)
|++||+|+| .|++|..+.+.|.++. ++|....+++. ........ .+... .+++++.+ ++|+
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 86 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDI 86 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCE
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCE
Confidence 346999999 8999999999998765 57766643221 12211100 11111 24555556 8999
Q ss_pred EEEeCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCC
Q 021213 65 VITMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTI 104 (316)
Q Consensus 65 vi~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~ 104 (316)
||+|+|.... .+.... +++ .+..|||.++.
T Consensus 87 V~~atp~~~~--~~~a~~---~~~-----aG~~VId~s~~ 116 (354)
T 1ys4_A 87 VFSALPSDLA--KKFEPE---FAK-----EGKLIFSNASA 116 (354)
T ss_dssp EEECCCHHHH--HHHHHH---HHH-----TTCEEEECCST
T ss_pred EEECCCchHH--HHHHHH---HHH-----CCCEEEECCch
Confidence 9999997653 443332 222 34568888865
No 310
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=97.48 E-value=0.00054 Score=58.33 Aligned_cols=75 Identities=17% Similarity=0.262 Sum_probs=58.6
Q ss_pred CCeEEEEccch-hhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 5 DQSVGFIGLGN-MGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 5 ~~~IgiiG~G~-mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
.+++.|||.|. +|.+++..|.+.|..|++++++. .++++.+++||+||.+++.+.- +.
T Consensus 160 Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t--------------~~L~~~~~~ADIVI~Avg~p~~-----I~-- 218 (285)
T 3p2o_A 160 GKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT--------------KDLSLYTRQADLIIVAAGCVNL-----LR-- 218 (285)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SCHHHHHTTCSEEEECSSCTTC-----BC--
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHHhhcCCEEEECCCCCCc-----CC--
Confidence 47899999988 69999999999999999998752 4677889999999999986431 21
Q ss_pred CCcccCCCCCCCeEEEEcCCCC
Q 021213 84 NGLLQGGNSVRPQLLIDSSTID 105 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~ 105 (316)
.+.+ .++.++||.+...
T Consensus 219 ~~~v-----k~GavVIDVgi~~ 235 (285)
T 3p2o_A 219 SDMV-----KEGVIVVDVGINR 235 (285)
T ss_dssp GGGS-----CTTEEEEECCCEE
T ss_pred HHHc-----CCCeEEEEeccCc
Confidence 1233 3678999988653
No 311
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.46 E-value=0.0004 Score=61.35 Aligned_cols=68 Identities=24% Similarity=0.378 Sum_probs=47.4
Q ss_pred CeEEEEccchhhHHHHHHHHhCC-CeEE-EEeCChhHHHHHH-hCCCC-----------------CcCCHHHHhhcCCEE
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAG-YKMA-VHDVNCNVMKMFS-DMGVP-----------------TKETPFEVAEASDVV 65 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g-~~V~-~~~r~~~~~~~l~-~~g~~-----------------~~~~~~~~~~~adiv 65 (316)
.||||+|+|+||..+++.|.++. .+|. +.+++++....+. ..|.. ...+.+++.+++|+|
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV 81 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV 81 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEE
Confidence 58999999999999999998764 4544 5677765543332 23333 223444555689999
Q ss_pred EEeCCCCh
Q 021213 66 ITMLPSSS 73 (316)
Q Consensus 66 i~~vp~~~ 73 (316)
|.|+|...
T Consensus 82 ~~aTp~~~ 89 (340)
T 1b7g_O 82 VDTTPNGV 89 (340)
T ss_dssp EECCSTTH
T ss_pred EECCCCch
Confidence 99999875
No 312
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=97.46 E-value=0.00012 Score=63.27 Aligned_cols=64 Identities=14% Similarity=0.291 Sum_probs=46.3
Q ss_pred CeEEEEccchhhHHHHHHHHhCC--CeEEEEeCChhHHH----HHHh----CC--CCC-cCCHHHHhhcCCEEEEeC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAG--YKMAVHDVNCNVMK----MFSD----MG--VPT-KETPFEVAEASDVVITML 69 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g--~~V~~~~r~~~~~~----~l~~----~g--~~~-~~~~~~~~~~adivi~~v 69 (316)
|||+|||+|.+|.++|..|..++ .++.+||+++++.+ .+.+ .+ ... .++..+.+++||+||++-
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitA 77 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTA 77 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEec
Confidence 79999999999999999988777 48999999886532 2332 11 111 122345688999999964
No 313
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.44 E-value=7.6e-05 Score=64.49 Aligned_cols=95 Identities=12% Similarity=0.142 Sum_probs=62.3
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC-C----------CCCcCCHHHHhhcCCEEEEeCCCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-G----------VPTKETPFEVAEASDVVITMLPSSS 73 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~-g----------~~~~~~~~~~~~~adivi~~vp~~~ 73 (316)
.+++.|+|+|.+|.+++..|++.| +|++++|+.++.+.+.+. + +.. .+..+.+..+|+||.|+|...
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~~~~~~DilVn~ag~~~ 205 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKF-SGLDVDLDGVDIIINATPIGM 205 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEE-ECTTCCCTTCCEEEECSCTTC
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEE-eeHHHhhCCCCEEEECCCCCC
Confidence 468999999999999999999999 999999998887666432 0 011 122345568999999998653
Q ss_pred hhHHHHhcCCCCcccCCCCCCCeEEEEcCCCC
Q 021213 74 HQVLDVYNGPNGLLQGGNSVRPQLLIDSSTID 105 (316)
Q Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~ 105 (316)
. ... .. .++.......++.+++|++...
T Consensus 206 ~--~~~-~~-~~~~~~~~l~~~~~v~Dv~y~p 233 (287)
T 1nvt_A 206 Y--PNI-DV-EPIVKAEKLREDMVVMDLIYNP 233 (287)
T ss_dssp T--TCC-SS-CCSSCSTTCCSSSEEEECCCSS
T ss_pred C--CCC-CC-CCCCCHHHcCCCCEEEEeeeCC
Confidence 1 110 00 0010101123566899998753
No 314
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=97.42 E-value=0.00042 Score=61.25 Aligned_cols=64 Identities=23% Similarity=0.226 Sum_probs=50.7
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhh-cCCEEEEe
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAE-ASDVVITM 68 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~-~adivi~~ 68 (316)
..++|+|+|+|++|...++.+...|.+|+++|+++++.+...+.+.+.. +.+++++ +||+++-|
T Consensus 174 ~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~ 238 (355)
T 1c1d_A 174 DGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPC 238 (355)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEe-ChHHhhcCccceecHh
Confidence 3478999999999999999999999999999999776333334555443 5667776 89999876
No 315
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=97.42 E-value=0.00049 Score=60.61 Aligned_cols=70 Identities=16% Similarity=0.268 Sum_probs=47.6
Q ss_pred CCeEEEEccchhhHHHHHHHHhC-CCeEEE-EeC--ChhHHHHHHhC----C-C--------------------CCcCCH
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKA-GYKMAV-HDV--NCNVMKMFSDM----G-V--------------------PTKETP 55 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~-g~~V~~-~~r--~~~~~~~l~~~----g-~--------------------~~~~~~ 55 (316)
++||||+|+|++|..+++.|.++ +.+|.. .|+ +++....+.+. | . ....++
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~ 82 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP 82 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred ceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCH
Confidence 46999999999999999998874 467654 454 66666555441 1 0 011255
Q ss_pred HHHh---hcCCEEEEeCCCChh
Q 021213 56 FEVA---EASDVVITMLPSSSH 74 (316)
Q Consensus 56 ~~~~---~~adivi~~vp~~~~ 74 (316)
+++. .++|+||.|+|...+
T Consensus 83 ~~l~~~~~~vDvV~eatg~~~~ 104 (335)
T 1u8f_O 83 SKIKWGDAGAEYVVESTGVFTT 104 (335)
T ss_dssp GGCCTTTTTCCEEEECSSSCCS
T ss_pred HHCccccCCCCEEEECCCchhh
Confidence 5542 479999999997653
No 316
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=97.42 E-value=0.00084 Score=59.27 Aligned_cols=68 Identities=22% Similarity=0.370 Sum_probs=47.2
Q ss_pred CeEEEEccchhhHHHHHHHHhC-CCeEEE-EeCChhHHHH---------------------HHhCCCCCcCCHHHHhhcC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKA-GYKMAV-HDVNCNVMKM---------------------FSDMGVPTKETPFEVAEAS 62 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~-g~~V~~-~~r~~~~~~~---------------------l~~~g~~~~~~~~~~~~~a 62 (316)
+||||+|+|++|..+++.|.++ +++|.. .|++++.... +.+.++....++.++..++
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~v 82 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIEDA 82 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGGC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccCC
Confidence 6999999999999999999876 467554 4544443322 2233333434555566789
Q ss_pred CEEEEeCCCCh
Q 021213 63 DVVITMLPSSS 73 (316)
Q Consensus 63 divi~~vp~~~ 73 (316)
|+|+.|+|...
T Consensus 83 DiV~eatg~~~ 93 (343)
T 2yyy_A 83 DIVVDGAPKKI 93 (343)
T ss_dssp SEEEECCCTTH
T ss_pred CEEEECCCccc
Confidence 99999998765
No 317
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=97.38 E-value=0.00059 Score=58.10 Aligned_cols=75 Identities=16% Similarity=0.195 Sum_probs=58.3
Q ss_pred CCeEEEEccch-hhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 5 DQSVGFIGLGN-MGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 5 ~~~IgiiG~G~-mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
.+++.|||.|. +|.+++..|...|..|+++++.. .++++.+++||+||.+++.+.- +.
T Consensus 161 Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T--------------~~L~~~~~~ADIVI~Avg~p~~-----I~-- 219 (286)
T 4a5o_A 161 GMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT--------------RDLADHVSRADLVVVAAGKPGL-----VK-- 219 (286)
T ss_dssp TCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC--------------SCHHHHHHTCSEEEECCCCTTC-----BC--
T ss_pred CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC--------------cCHHHHhccCCEEEECCCCCCC-----CC--
Confidence 47899999887 89999999999999999998642 3677888999999999986431 21
Q ss_pred CCcccCCCCCCCeEEEEcCCCC
Q 021213 84 NGLLQGGNSVRPQLLIDSSTID 105 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~ 105 (316)
.+++ .++.++||.+...
T Consensus 220 ~~~v-----k~GavVIDvgi~~ 236 (286)
T 4a5o_A 220 GEWI-----KEGAIVIDVGINR 236 (286)
T ss_dssp GGGS-----CTTCEEEECCSCS
T ss_pred HHHc-----CCCeEEEEecccc
Confidence 1233 3667999998654
No 318
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.35 E-value=0.00013 Score=60.23 Aligned_cols=65 Identities=17% Similarity=0.266 Sum_probs=46.5
Q ss_pred CCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCC-----CCC--cCCHHHHhhcCCEEEEeCC
Q 021213 5 DQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMG-----VPT--KETPFEVAEASDVVITMLP 70 (316)
Q Consensus 5 ~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g-----~~~--~~~~~~~~~~adivi~~vp 70 (316)
+|+|.|.| .|.+|..+++.|.+.|++|++.+|++++.+.+. .+ ... ..+..++++++|+||-+..
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~ 76 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN-EHLKVKKADVSSLDEVCEVCKGADAVISAFN 76 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC-TTEEEECCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc-CceEEEEecCCCHHHHHHHhcCCCEEEEeCc
Confidence 37999998 599999999999999999999999987643221 11 111 1223455667788777654
No 319
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.35 E-value=0.00031 Score=60.84 Aligned_cols=152 Identities=14% Similarity=0.056 Sum_probs=86.5
Q ss_pred CeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhHH-HHHHhCCCCCcCCHHHHhh--c-CCEEEEeCCCChhhHHHHh
Q 021213 6 QSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVM-KMFSDMGVPTKETPFEVAE--A-SDVVITMLPSSSHQVLDVY 80 (316)
Q Consensus 6 ~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~~-~~l~~~g~~~~~~~~~~~~--~-adivi~~vp~~~~~~~~v~ 80 (316)
.+|.|+|+ |+||..+.+.+.+.|++ .+|..+|.+. +. -.|+....|++++.+ . +|++++++|... +.+++
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~g~~-~v~~VnP~~~g~~--i~G~~vy~sl~el~~~~~~~DvaIi~vp~~~--~~~~v 88 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEYGTK-VVAGVTPGKGGSE--VHGVPVYDSVKEALAEHPEINTSIVFVPAPF--APDAV 88 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTCE--ETTEEEESSHHHHHHHCTTCCEEEECCCGGG--HHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCc-EEEEeCCCCCCce--ECCEeeeCCHHHHhhcCCCCCEEEEecCHHH--HHHHH
Confidence 56778898 99999999999999998 5555555431 11 147778889999887 5 999999999765 45555
Q ss_pred cCCCCcccCCCCCCCeEEEEcCCCC-HHHHHHHHHHHhhchhhhccCCCCCccEEeccC----CCChHhhhcCceEEEec
Q 021213 81 NGPNGLLQGGNSVRPQLLIDSSTID-PQTSRNISAAVSNCILKEKKDSWENPVMLDAPV----SGGVLAAEAGTLTFMVG 155 (316)
Q Consensus 81 ~~~~~~~~~~~~~~~~~vi~~st~~-~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p~----~~~~~~~~~g~~~~~~~ 155 (316)
.+. .+. +-+.+|..+++. ....+++.+..++.+++ ..| .+-.-+++... +........|. .-+++
T Consensus 89 ~ea---~~~----Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~-viG-PNc~Gii~~~~~~~~~~~~~~~~~G~-va~vS 158 (297)
T 2yv2_A 89 YEA---VDA----GIRLVVVITEGIPVHDTMRFVNYARQKGAT-IIG-PNCPGAITPGQAKVGIMPGHIFKEGG-VAVVS 158 (297)
T ss_dssp HHH---HHT----TCSEEEECCCCCCHHHHHHHHHHHHHHTCE-EEC-SSSCEEEETTTEEEESCCGGGCCEEE-EEEEE
T ss_pred HHH---HHC----CCCEEEEECCCCCHHHHHHHHHHHHHcCCE-EEc-CCCCeeEcccccceeecccCCCCCCC-EEEEE
Confidence 432 221 123344455554 33455666666554321 111 00011111110 00111122344 55777
Q ss_pred CCHHHHHHHHHHHHhcC
Q 021213 156 GSEDAYQAAKPLFLSMG 172 (316)
Q Consensus 156 ~~~~~~~~v~~ll~~~g 172 (316)
.+......+...+...|
T Consensus 159 qSG~l~~~~~~~~~~~g 175 (297)
T 2yv2_A 159 RSGTLTYEISYMLTRQG 175 (297)
T ss_dssp SCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcC
Confidence 77777666666665543
No 320
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.35 E-value=0.00042 Score=60.99 Aligned_cols=70 Identities=19% Similarity=0.281 Sum_probs=48.4
Q ss_pred CCCCeEEEEccchhhHHHHHHHHhC------C--CeE-EEEeCChhHHHH------HH----hCCCC-CcC---CHHHHh
Q 021213 3 FFDQSVGFIGLGNMGFRMASNLMKA------G--YKM-AVHDVNCNVMKM------FS----DMGVP-TKE---TPFEVA 59 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~~la~~l~~~------g--~~V-~~~~r~~~~~~~------l~----~~g~~-~~~---~~~~~~ 59 (316)
|.++||||||+|.||..++..|.+. | .+| .++||++++.+. +. ..++. .++ |.++++
T Consensus 4 M~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll 83 (331)
T 3c8m_A 4 MKTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEAL 83 (331)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHH
T ss_pred CcEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHh
Confidence 3347999999999999999998764 2 454 467887654322 11 12321 344 788877
Q ss_pred -hcCCEEEEeCCCC
Q 021213 60 -EASDVVITMLPSS 72 (316)
Q Consensus 60 -~~adivi~~vp~~ 72 (316)
.+.|+|+.|+|+.
T Consensus 84 ~~~iDvVv~~t~~~ 97 (331)
T 3c8m_A 84 ARDFDIVVDATPAS 97 (331)
T ss_dssp HSSCSEEEECSCCC
T ss_pred CCCCCEEEECCCCC
Confidence 3589999999985
No 321
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.33 E-value=0.00052 Score=60.21 Aligned_cols=68 Identities=19% Similarity=0.316 Sum_probs=47.2
Q ss_pred CeEEEEccchhhHHHHHHHHhC---------CCeEE-EEeCChhHHH------HHHh--CCCCCcC--CHHHHhh--cCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKA---------GYKMA-VHDVNCNVMK------MFSD--MGVPTKE--TPFEVAE--ASD 63 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~---------g~~V~-~~~r~~~~~~------~l~~--~g~~~~~--~~~~~~~--~ad 63 (316)
+||+|||+|.||+.+++.|.+. +.+|. ++|+++.+.+ .+.+ ......+ |.+++++ +.|
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~iD 82 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYD 82 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCCS
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCCC
Confidence 6999999999999999999875 44544 5677754321 1211 1123344 8888886 589
Q ss_pred EEEEeCCCCh
Q 021213 64 VVITMLPSSS 73 (316)
Q Consensus 64 ivi~~vp~~~ 73 (316)
+|+.|+|+..
T Consensus 83 vVv~~tp~~~ 92 (327)
T 3do5_A 83 VLIEASVTRV 92 (327)
T ss_dssp EEEECCCCC-
T ss_pred EEEECCCCcc
Confidence 9999999864
No 322
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=97.32 E-value=0.00045 Score=60.20 Aligned_cols=65 Identities=25% Similarity=0.310 Sum_probs=49.0
Q ss_pred CeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChh-HHH---HHHhCCCCC-------cCCHHHHhhcCCEEEEeCC
Q 021213 6 QSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCN-VMK---MFSDMGVPT-------KETPFEVAEASDVVITMLP 70 (316)
Q Consensus 6 ~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~-~~~---~l~~~g~~~-------~~~~~~~~~~adivi~~vp 70 (316)
++|.|.|+ |.+|..+++.|++.||+|++.+|+++ +.+ .+...++.. ..+..++++++|+||.+.+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 48999995 99999999999999999999999874 333 233445322 1234567788999999875
No 323
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.32 E-value=0.00021 Score=62.66 Aligned_cols=69 Identities=19% Similarity=0.269 Sum_probs=44.5
Q ss_pred CCCeEEEEccchhhHHHHHHHHhC-----C--CeEE-EEeCChhH---------H-HHHHhCC-CCC-cCCHHHHhh--c
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKA-----G--YKMA-VHDVNCNV---------M-KMFSDMG-VPT-KETPFEVAE--A 61 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~-----g--~~V~-~~~r~~~~---------~-~~l~~~g-~~~-~~~~~~~~~--~ 61 (316)
.+.||+|||+|.||+.+++.|.+. | .+|. ++|+++.. . +...+.| +.. ..+..+.++ +
T Consensus 3 k~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~d~~e~l~~~~ 82 (325)
T 3ing_A 3 KEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAFSGPEDLMGEA 82 (325)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBCCSGGGGTTSC
T ss_pred ceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccCCHHHHhcCCC
Confidence 346899999999999999999874 2 3433 45776532 1 1222233 221 115666664 5
Q ss_pred CCEEEEeCCCC
Q 021213 62 SDVVITMLPSS 72 (316)
Q Consensus 62 adivi~~vp~~ 72 (316)
.|+|+.|+|+.
T Consensus 83 iDvVVe~T~~~ 93 (325)
T 3ing_A 83 ADLLVDCTPAS 93 (325)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCCCc
Confidence 89999999874
No 324
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=97.31 E-value=0.00031 Score=61.03 Aligned_cols=106 Identities=14% Similarity=0.146 Sum_probs=70.3
Q ss_pred CCCCeEEEE-cc-chhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhh--cCCEEEEeCCCChhhHHH
Q 021213 3 FFDQSVGFI-GL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITMLPSSSHQVLD 78 (316)
Q Consensus 3 ~~~~~Igii-G~-G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~adivi~~vp~~~~~~~~ 78 (316)
+.+.+|+|| |+ |++|..+++.|.+.|++ .+|+.||.+.. -.-.|.....|++|+.+ .+|++++++|... ..+
T Consensus 11 ~~~~siaVV~Gasg~~G~~~~~~l~~~G~~-~v~~VnP~~~g-~~i~G~~vy~sl~el~~~~~vD~avI~vP~~~--~~~ 86 (305)
T 2fp4_A 11 VDKNTKVICQGFTGKQGTFHSQQALEYGTN-LVGGTTPGKGG-KTHLGLPVFNTVKEAKEQTGATASVIYVPPPF--AAA 86 (305)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTT-CEETTEEEESSHHHHHHHHCCCEEEECCCHHH--HHH
T ss_pred hCCCcEEEEECCCCCHHHHHHHHHHHCCCc-EEEEeCCCcCc-ceECCeeeechHHHhhhcCCCCEEEEecCHHH--HHH
Confidence 345678999 98 99999999999999999 44555554311 00247777789999988 8999999999765 455
Q ss_pred HhcCCCCcccCCCCCCCeEEEEcCCCCH-HHHHHHHHHHhhc
Q 021213 79 VYNGPNGLLQGGNSVRPQLLIDSSTIDP-QTSRNISAAVSNC 119 (316)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~vi~~st~~~-~~~~~l~~~~~~~ 119 (316)
++.+. ++. +-+.++..+.+.+ ...+++.+..++.
T Consensus 87 ~~~e~---i~~----Gi~~iv~~t~G~~~~~~~~l~~~a~~~ 121 (305)
T 2fp4_A 87 AINEA---IDA----EVPLVVCITEGIPQQDMVRVKHRLLRQ 121 (305)
T ss_dssp HHHHH---HHT----TCSEEEECCCCCCHHHHHHHHHHHTTC
T ss_pred HHHHH---HHC----CCCEEEEECCCCChHHHHHHHHHHHhc
Confidence 55432 221 1125455555543 3334566666554
No 325
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.31 E-value=0.00043 Score=60.29 Aligned_cols=66 Identities=23% Similarity=0.252 Sum_probs=47.9
Q ss_pred CeEEEEc-cchhhHHHHHHHHhC-C--CeEEEEeCChh---HHHHHHhCCC--CCc----CCHHHHhhcCCEEEEeCCC
Q 021213 6 QSVGFIG-LGNMGFRMASNLMKA-G--YKMAVHDVNCN---VMKMFSDMGV--PTK----ETPFEVAEASDVVITMLPS 71 (316)
Q Consensus 6 ~~IgiiG-~G~mG~~la~~l~~~-g--~~V~~~~r~~~---~~~~l~~~g~--~~~----~~~~~~~~~adivi~~vp~ 71 (316)
|||+||| +|.+|.+++..|... + .++.++|+++. ....+.+... ... ++..+.+++||+||++.+.
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~ 79 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGV 79 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCC
Confidence 6999999 899999999999875 4 58999999862 2233443221 111 3567788999999997543
No 326
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.30 E-value=0.0005 Score=59.77 Aligned_cols=65 Identities=17% Similarity=0.217 Sum_probs=47.7
Q ss_pred CeEEEEc-cchhhHHHHHHHHhCCC--eEEEEeC--ChhHHHH----HHhC-----CCCCcCCHHHHhhcCCEEEEeCC
Q 021213 6 QSVGFIG-LGNMGFRMASNLMKAGY--KMAVHDV--NCNVMKM----FSDM-----GVPTKETPFEVAEASDVVITMLP 70 (316)
Q Consensus 6 ~~IgiiG-~G~mG~~la~~l~~~g~--~V~~~~r--~~~~~~~----l~~~-----g~~~~~~~~~~~~~adivi~~vp 70 (316)
|||+|+| +|.+|.+++..|+..++ ++.++|+ ++++++. +.+. ......+..++++++|+||++..
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ag 79 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAG 79 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcCC
Confidence 6999999 99999999999998885 7999999 7765432 2221 11222233677899999999754
No 327
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=97.27 E-value=0.00037 Score=61.28 Aligned_cols=66 Identities=11% Similarity=0.233 Sum_probs=48.2
Q ss_pred CCCCeEEEEcc-chhhHHHHHHHHhCCC-------eEEEEeCCh--hHH----HHHHhCC------CCCcCCHHHHhhcC
Q 021213 3 FFDQSVGFIGL-GNMGFRMASNLMKAGY-------KMAVHDVNC--NVM----KMFSDMG------VPTKETPFEVAEAS 62 (316)
Q Consensus 3 ~~~~~IgiiG~-G~mG~~la~~l~~~g~-------~V~~~~r~~--~~~----~~l~~~g------~~~~~~~~~~~~~a 62 (316)
.++|||.|+|+ |.+|+.++..|.+.|+ +|.++|+++ ++. ..+.+.. +....+..++++++
T Consensus 2 ~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~~~ 81 (327)
T 1y7t_A 2 KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDA 81 (327)
T ss_dssp CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhCCC
Confidence 34589999996 9999999999999986 899999974 222 2232211 11224667788899
Q ss_pred CEEEEe
Q 021213 63 DVVITM 68 (316)
Q Consensus 63 divi~~ 68 (316)
|+||.+
T Consensus 82 D~Vih~ 87 (327)
T 1y7t_A 82 DYALLV 87 (327)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 999986
No 328
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=97.21 E-value=4.4e-05 Score=67.51 Aligned_cols=91 Identities=11% Similarity=0.102 Sum_probs=51.0
Q ss_pred CCCeEEEEc-cchhhHHHHHHHHhCCC---eEEEE-eCC-hhHHHHHHhCCCCCcC-CHHHHhhcCCEEEEeCCCChhhH
Q 021213 4 FDQSVGFIG-LGNMGFRMASNLMKAGY---KMAVH-DVN-CNVMKMFSDMGVPTKE-TPFEVAEASDVVITMLPSSSHQV 76 (316)
Q Consensus 4 ~~~~IgiiG-~G~mG~~la~~l~~~g~---~V~~~-~r~-~~~~~~l~~~g~~~~~-~~~~~~~~adivi~~vp~~~~~~ 76 (316)
|+|||+|+| .|++|..+.+.|.+.+| ++... ++. ..+.-.+....+...+ +++ .++++|+||+|+|....
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~g~~i~~~~~~~~-~~~~~DvV~~a~g~~~s-- 81 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSF-DFSSVGLAFFAAAAEVS-- 81 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGC-CGGGCSEEEECSCHHHH--
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccCCcceEEecCCHH-HhcCCCEEEEcCCcHHH--
Confidence 457999999 79999999999987665 34444 332 1110001100111111 222 25689999999996542
Q ss_pred HHHhcCCCCcccCCCCCCCeEEEEcCCCC
Q 021213 77 LDVYNGPNGLLQGGNSVRPQLLIDSSTID 105 (316)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~vi~~st~~ 105 (316)
.+.... +++ .+..+||.|+..
T Consensus 82 ~~~a~~---~~~-----aG~kvId~Sa~~ 102 (340)
T 2hjs_A 82 RAHAER---ARA-----AGCSVIDLSGAL 102 (340)
T ss_dssp HHHHHH---HHH-----TTCEEEETTCTT
T ss_pred HHHHHH---HHH-----CCCEEEEeCCCC
Confidence 333321 121 234577777543
No 329
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=97.20 E-value=0.00012 Score=65.07 Aligned_cols=90 Identities=16% Similarity=0.152 Sum_probs=53.9
Q ss_pred CCeEEEEc-cchhhHHHHHHHHhCC-CeEEEE-eCCh--hHHHHHH-----------hCCCCCc-CCHHHHhhcCCEEEE
Q 021213 5 DQSVGFIG-LGNMGFRMASNLMKAG-YKMAVH-DVNC--NVMKMFS-----------DMGVPTK-ETPFEVAEASDVVIT 67 (316)
Q Consensus 5 ~~~IgiiG-~G~mG~~la~~l~~~g-~~V~~~-~r~~--~~~~~l~-----------~~g~~~~-~~~~~~~~~adivi~ 67 (316)
++||+||| .|+.|.-+.+.|.++- .++... .++. .++...- ....... .+.+ .++++|+||+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~-~~~~vDvvf~ 85 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPK-LMDDVDIIFS 85 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGG-GCTTCCEEEE
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHH-HhcCCCEEEE
Confidence 46899999 6999999999887754 355544 3332 1232210 0011221 1223 3578999999
Q ss_pred eCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCC
Q 021213 68 MLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTID 105 (316)
Q Consensus 68 ~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~ 105 (316)
|+|.... ++.... +++ .+..+||.|+-.
T Consensus 86 a~p~~~s--~~~a~~---~~~-----~G~~vIDlSa~~ 113 (359)
T 4dpk_A 86 PLPQGAA--GPVEEQ---FAK-----EGFPVISNSPDH 113 (359)
T ss_dssp CCCTTTH--HHHHHH---HHH-----TTCEEEECSSTT
T ss_pred CCChHHH--HHHHHH---HHH-----CCCEEEEcCCCc
Confidence 9998764 444432 222 456888888753
No 330
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=97.20 E-value=0.00012 Score=65.07 Aligned_cols=90 Identities=16% Similarity=0.152 Sum_probs=54.1
Q ss_pred CCeEEEEc-cchhhHHHHHHHHhCC-CeEEEE-eCCh--hHHHHHH-----------hCCCCCc-CCHHHHhhcCCEEEE
Q 021213 5 DQSVGFIG-LGNMGFRMASNLMKAG-YKMAVH-DVNC--NVMKMFS-----------DMGVPTK-ETPFEVAEASDVVIT 67 (316)
Q Consensus 5 ~~~IgiiG-~G~mG~~la~~l~~~g-~~V~~~-~r~~--~~~~~l~-----------~~g~~~~-~~~~~~~~~adivi~ 67 (316)
++||+||| .|+.|.-+.+.|.++- .++... .++. .++...- ....... .+.+ .++++|+||+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~-~~~~vDvvf~ 85 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPK-LMDDVDIIFS 85 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGG-GCTTCCEEEE
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHH-HhcCCCEEEE
Confidence 46899999 6999999999887754 355544 3332 1232210 0011221 1223 3578999999
Q ss_pred eCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCC
Q 021213 68 MLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTID 105 (316)
Q Consensus 68 ~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~ 105 (316)
|+|.... ++.... +++ .+..+||.|+-.
T Consensus 86 a~p~~~s--~~~a~~---~~~-----~G~~vIDlSa~~ 113 (359)
T 4dpl_A 86 PLPQGAA--GPVEEQ---FAK-----EGFPVISNSPDH 113 (359)
T ss_dssp CCCTTTH--HHHHHH---HHH-----TTCEEEECSSTT
T ss_pred CCChHHH--HHHHHH---HHH-----CCCEEEEcCCCc
Confidence 9998764 444432 222 456888988753
No 331
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=97.20 E-value=0.00019 Score=61.63 Aligned_cols=61 Identities=16% Similarity=0.301 Sum_probs=45.4
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCC-------CcCCHHHHhhc-CCEEEEeC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP-------TKETPFEVAEA-SDVVITML 69 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~-------~~~~~~~~~~~-adivi~~v 69 (316)
+|+|.|.|+|.+|+.++..|.+.||+|++.+|++++.. .++. -..+..++++. +|+||-+.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a 71 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPMP----AGVQTLIADVTRPDTLASIVHLRPEILVYCV 71 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCCC----TTCCEEECCTTCGGGCTTGGGGCCSEEEECH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccccc----cCCceEEccCCChHHHHHhhcCCCCEEEEeC
Confidence 46899999999999999999999999999999876521 2211 11223345555 99998865
No 332
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=97.18 E-value=0.00083 Score=59.32 Aligned_cols=67 Identities=18% Similarity=0.184 Sum_probs=49.9
Q ss_pred CCeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCCh----hHHH---HHHhCCCCC-------cCCHHHHhh--cCCEEEE
Q 021213 5 DQSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNC----NVMK---MFSDMGVPT-------KETPFEVAE--ASDVVIT 67 (316)
Q Consensus 5 ~~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~----~~~~---~l~~~g~~~-------~~~~~~~~~--~adivi~ 67 (316)
+|+|.|.|+ |.+|..++..|.+.||+|++.+|++ ++.+ .+...++.. ..+..++++ ++|+||.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~ 89 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS 89 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence 468999998 9999999999999999999999976 4443 333344322 123455677 8999999
Q ss_pred eCCC
Q 021213 68 MLPS 71 (316)
Q Consensus 68 ~vp~ 71 (316)
+...
T Consensus 90 ~a~~ 93 (346)
T 3i6i_A 90 TVGG 93 (346)
T ss_dssp CCCG
T ss_pred CCch
Confidence 8754
No 333
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=97.17 E-value=0.00051 Score=59.65 Aligned_cols=65 Identities=12% Similarity=0.187 Sum_probs=46.8
Q ss_pred CCCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC-----CCCCcCCHHHHhhcCCEEEEeCC
Q 021213 4 FDQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-----GVPTKETPFEVAEASDVVITMLP 70 (316)
Q Consensus 4 ~~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~-----g~~~~~~~~~~~~~adivi~~vp 70 (316)
|+|+|.|.| .|.+|+.++..|.+.|++|++.+|++...+ +... .+. ..+..++++++|+||-+..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~ 71 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-INDYEYRVSDYT-LEDLINQLNDVDAVVHLAA 71 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------CCEEEECCCC-HHHHHHHTTTCSEEEECCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CCceEEEEcccc-HHHHHHhhcCCCEEEEccc
Confidence 347999998 699999999999999999999999855544 3311 122 3445567788999998753
No 334
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=97.17 E-value=0.00078 Score=58.12 Aligned_cols=66 Identities=18% Similarity=0.136 Sum_probs=50.4
Q ss_pred CCeEEEEcc-chhhHHHHHHHHhCC-CeEEEEeCChhHH--HHHHhCCCCC-----c--CCHHHHhhcCCEEEEeCC
Q 021213 5 DQSVGFIGL-GNMGFRMASNLMKAG-YKMAVHDVNCNVM--KMFSDMGVPT-----K--ETPFEVAEASDVVITMLP 70 (316)
Q Consensus 5 ~~~IgiiG~-G~mG~~la~~l~~~g-~~V~~~~r~~~~~--~~l~~~g~~~-----~--~~~~~~~~~adivi~~vp 70 (316)
+|+|.|.|+ |.+|..+++.|.+.| ++|++.+|++++. +.+...++.. . .+..++++++|+||.+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 478999987 999999999999988 9999999987753 3444445321 1 234456788999999864
No 335
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=97.15 E-value=0.00035 Score=61.63 Aligned_cols=66 Identities=15% Similarity=0.088 Sum_probs=52.9
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCC----cCCHH---HH-hhcCCEEEEeCCCCh
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPT----KETPF---EV-AEASDVVITMLPSSS 73 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~----~~~~~---~~-~~~adivi~~vp~~~ 73 (316)
++|.|+|+|.+|..+++.|.+.|+ |++.|+++++++ +.+.+... .++++ ++ ++++|.++++++++.
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~ 189 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDS 189 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccH
Confidence 479999999999999999999999 999999999998 87766432 12222 22 467899999998764
No 336
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=97.15 E-value=0.00024 Score=58.45 Aligned_cols=37 Identities=14% Similarity=0.283 Sum_probs=33.6
Q ss_pred CeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHH
Q 021213 6 QSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMK 42 (316)
Q Consensus 6 ~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~ 42 (316)
|||.|.| .|.+|..+++.|++.|++|++.+|++++.+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~ 38 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVP 38 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchh
Confidence 5899998 899999999999999999999999987543
No 337
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=97.13 E-value=0.00022 Score=63.37 Aligned_cols=90 Identities=18% Similarity=0.283 Sum_probs=53.2
Q ss_pred CCCeEEEEc-cchhhHHHHHHHHhCC-CeEEEEe-CChhHHHHHHh--------------CCCCCcC-CHHHHhhcCCEE
Q 021213 4 FDQSVGFIG-LGNMGFRMASNLMKAG-YKMAVHD-VNCNVMKMFSD--------------MGVPTKE-TPFEVAEASDVV 65 (316)
Q Consensus 4 ~~~~IgiiG-~G~mG~~la~~l~~~g-~~V~~~~-r~~~~~~~l~~--------------~g~~~~~-~~~~~~~~adiv 65 (316)
+++||+|+| .|++|..+.+.|.++. .++.... .+...-+.+.+ ..+...+ ++++ ++++|+|
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~vDvV 81 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDVDVV 81 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTCSEE
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCCCEE
Confidence 347999999 8999999999998764 4666554 22221111110 1111211 3334 4789999
Q ss_pred EEeCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCC
Q 021213 66 ITMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTI 104 (316)
Q Consensus 66 i~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~ 104 (316)
|+|+|...+ .+.... +++ .+..+||.|+.
T Consensus 82 f~atp~~~s--~~~a~~---~~~-----aG~~VId~s~~ 110 (350)
T 2ep5_A 82 LSALPNELA--ESIELE---LVK-----NGKIVVSNASP 110 (350)
T ss_dssp EECCCHHHH--HHHHHH---HHH-----TTCEEEECSST
T ss_pred EECCChHHH--HHHHHH---HHH-----CCCEEEECCcc
Confidence 999997653 333322 222 34568888764
No 338
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=97.13 E-value=6.4e-05 Score=61.69 Aligned_cols=68 Identities=10% Similarity=0.156 Sum_probs=47.7
Q ss_pred CeEEEEccchhhHHHHHHHHh-CCCeEE-EEeCChhHHHHHHh-CCCCCcCCHHHHhh-cCCEEEEeCCCCh
Q 021213 6 QSVGFIGLGNMGFRMASNLMK-AGYKMA-VHDVNCNVMKMFSD-MGVPTKETPFEVAE-ASDVVITMLPSSS 73 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~-~g~~V~-~~~r~~~~~~~l~~-~g~~~~~~~~~~~~-~adivi~~vp~~~ 73 (316)
++|+|||+|.+|..+++.+.. .|+++. ++|.++++...... ..+...++.++.++ +.|+|++|+|+..
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~Ps~~ 152 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGESFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPREA 152 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSCHHH
T ss_pred CEEEEECccHHHHHHHHhHhhcCCcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCCchh
Confidence 689999999999999986322 266644 67998887543221 12223567777775 5899999999765
No 339
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.12 E-value=0.00025 Score=62.38 Aligned_cols=90 Identities=14% Similarity=0.196 Sum_probs=56.1
Q ss_pred CeEEEEc-cchhhHHHHHHHHhC-CCeEEEEeCCh---h---HHHHH----HhC-CCCCcC--CHHHHhhcCCEEEEeCC
Q 021213 6 QSVGFIG-LGNMGFRMASNLMKA-GYKMAVHDVNC---N---VMKMF----SDM-GVPTKE--TPFEVAEASDVVITMLP 70 (316)
Q Consensus 6 ~~IgiiG-~G~mG~~la~~l~~~-g~~V~~~~r~~---~---~~~~l----~~~-g~~~~~--~~~~~~~~adivi~~vp 70 (316)
+||+|+| .|.+|..+.+.|.++ .+++.....+. + ++... ... ...... +.+++.+++|+||+|+|
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a~p 84 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATA 84 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEECSC
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEECCC
Confidence 6999999 599999999999984 45776653322 2 22221 111 122221 34444478999999999
Q ss_pred CChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCC
Q 021213 71 SSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTID 105 (316)
Q Consensus 71 ~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~ 105 (316)
.... ++.... +++ .+..+||.|+-.
T Consensus 85 ~~~s--~~~~~~---~~~-----~g~~vIDlSa~f 109 (337)
T 3dr3_A 85 HEVS--HDLAPQ---FLE-----AGCVVFDLSGAF 109 (337)
T ss_dssp HHHH--HHHHHH---HHH-----TTCEEEECSSTT
T ss_pred hHHH--HHHHHH---HHH-----CCCEEEEcCCcc
Confidence 7653 444432 222 456899999864
No 340
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=97.11 E-value=0.0011 Score=57.36 Aligned_cols=67 Identities=21% Similarity=0.290 Sum_probs=49.0
Q ss_pred CCeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCCh------hHHHH---HHhCCCCC-----c--CCHHHHhhcCCEEEE
Q 021213 5 DQSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNC------NVMKM---FSDMGVPT-----K--ETPFEVAEASDVVIT 67 (316)
Q Consensus 5 ~~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~------~~~~~---l~~~g~~~-----~--~~~~~~~~~adivi~ 67 (316)
+|+|.|+|+ |.+|..+++.|++.||+|++.+|++ ++.+. +...|+.. . .+..++++++|+||.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 368999996 9999999999999999999999973 33332 23344321 1 234456788999999
Q ss_pred eCCC
Q 021213 68 MLPS 71 (316)
Q Consensus 68 ~vp~ 71 (316)
+.+.
T Consensus 84 ~a~~ 87 (308)
T 1qyc_A 84 TVGS 87 (308)
T ss_dssp CCCG
T ss_pred CCcc
Confidence 8753
No 341
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.10 E-value=0.00014 Score=63.90 Aligned_cols=66 Identities=12% Similarity=0.248 Sum_probs=47.9
Q ss_pred CCeEEEEccchhhHHHHHHHHhCC---------CeE-EEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAG---------YKM-AVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSS 73 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g---------~~V-~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~ 73 (316)
++||||||+|.||..+++.+.+.. .+| .++||++++.+.+. ....++|.++++ +.|+|+.|+|+..
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~~--~~~~~~d~~~ll-~iDvVve~t~~~~ 78 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAIP--QELLRAEPFDLL-EADLVVEAMGGVE 78 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSSC--GGGEESSCCCCT-TCSEEEECCCCSH
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhccC--cccccCCHHHHh-CCCEEEECCCCcH
Confidence 468999999999999999998763 344 46788865432110 012456777777 8999999999764
No 342
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=97.10 E-value=0.001 Score=59.08 Aligned_cols=71 Identities=13% Similarity=0.167 Sum_probs=50.6
Q ss_pred CCCCCCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHH--HHHHhC-CC-----CCcCC---HHHHhhcCCEEEEe
Q 021213 1 MLFFDQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVM--KMFSDM-GV-----PTKET---PFEVAEASDVVITM 68 (316)
Q Consensus 1 ~~~~~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~--~~l~~~-g~-----~~~~~---~~~~~~~adivi~~ 68 (316)
|.|..|+|.|.| .|.+|..+++.|++.||+|++.+|++++. +.+.+. ++ ...++ ..++++.+|+||.+
T Consensus 1 M~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~ 80 (352)
T 1xgk_A 1 MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFIN 80 (352)
T ss_dssp --CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEc
Confidence 444468899998 59999999999999999999999987764 444432 22 10123 44567889999986
Q ss_pred CCC
Q 021213 69 LPS 71 (316)
Q Consensus 69 vp~ 71 (316)
...
T Consensus 81 a~~ 83 (352)
T 1xgk_A 81 TTS 83 (352)
T ss_dssp CCS
T ss_pred CCC
Confidence 643
No 343
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=97.08 E-value=0.0012 Score=57.54 Aligned_cols=67 Identities=22% Similarity=0.286 Sum_probs=49.6
Q ss_pred CCeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCCh------hHHHH---HHhCCCCC-------cCCHHHHhhcCCEEEE
Q 021213 5 DQSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNC------NVMKM---FSDMGVPT-------KETPFEVAEASDVVIT 67 (316)
Q Consensus 5 ~~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~------~~~~~---l~~~g~~~-------~~~~~~~~~~adivi~ 67 (316)
+|+|.|.|+ |.+|..+++.|++.||+|++.+|++ ++.+. +...++.. ..+..++++++|+||.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~ 83 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS 83 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 468999995 9999999999999999999999986 33333 23344321 1234567789999999
Q ss_pred eCCC
Q 021213 68 MLPS 71 (316)
Q Consensus 68 ~vp~ 71 (316)
+...
T Consensus 84 ~a~~ 87 (321)
T 3c1o_A 84 ALPF 87 (321)
T ss_dssp CCCG
T ss_pred CCCc
Confidence 8753
No 344
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=97.08 E-value=0.0012 Score=57.24 Aligned_cols=67 Identities=21% Similarity=0.310 Sum_probs=49.4
Q ss_pred CCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCC-----hhHHHHH---HhCCCCC-----c--CCHHHHhhcCCEEEEe
Q 021213 5 DQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVN-----CNVMKMF---SDMGVPT-----K--ETPFEVAEASDVVITM 68 (316)
Q Consensus 5 ~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~-----~~~~~~l---~~~g~~~-----~--~~~~~~~~~adivi~~ 68 (316)
+|+|.|.| .|.+|+.+++.|.+.|++|++.+|+ +++.+.+ ...++.. . .+..++++++|+||.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 46899998 5999999999999999999999998 4444333 2334321 1 2345677889999998
Q ss_pred CCC
Q 021213 69 LPS 71 (316)
Q Consensus 69 vp~ 71 (316)
...
T Consensus 84 a~~ 86 (313)
T 1qyd_A 84 LAG 86 (313)
T ss_dssp CCC
T ss_pred Ccc
Confidence 653
No 345
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=97.06 E-value=0.00051 Score=60.47 Aligned_cols=69 Identities=16% Similarity=0.267 Sum_probs=44.9
Q ss_pred CCeEEEEccchhhHHHHHHHHhC-CCeEEEE-eC--ChhHHHHHHh----CCC---------------------CCc--C
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKA-GYKMAVH-DV--NCNVMKMFSD----MGV---------------------PTK--E 53 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~-g~~V~~~-~r--~~~~~~~l~~----~g~---------------------~~~--~ 53 (316)
++||||+|+|++|..+.+.|.++ +.+|... |+ +++....+.+ .|. ... .
T Consensus 3 ~ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 82 (337)
T 3e5r_O 3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIR 82 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEECCS
T ss_pred ceEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEecC
Confidence 46999999999999999999876 4565544 43 4444444431 110 001 1
Q ss_pred CHHHHh---hcCCEEEEeCCCCh
Q 021213 54 TPFEVA---EASDVVITMLPSSS 73 (316)
Q Consensus 54 ~~~~~~---~~adivi~~vp~~~ 73 (316)
+++++. .++|+||.|+|...
T Consensus 83 dp~~l~w~~~~vDvV~eaTg~~~ 105 (337)
T 3e5r_O 83 NPDEIPWAEAGAEYVVESTGVFT 105 (337)
T ss_dssp CGGGCCHHHHTCSEEEECSSSCC
T ss_pred ChHHccccccCCCEEEECCCchh
Confidence 555541 47999999999754
No 346
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=97.05 E-value=0.00012 Score=59.89 Aligned_cols=67 Identities=19% Similarity=0.306 Sum_probs=47.3
Q ss_pred CeEEEEccchhhHHHHHHH--HhCCCeEE-EEeCChh-HHHH-HHhCCCCC--cCCHHHHhh--cCCEEEEeCCCCh
Q 021213 6 QSVGFIGLGNMGFRMASNL--MKAGYKMA-VHDVNCN-VMKM-FSDMGVPT--KETPFEVAE--ASDVVITMLPSSS 73 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l--~~~g~~V~-~~~r~~~-~~~~-l~~~g~~~--~~~~~~~~~--~adivi~~vp~~~ 73 (316)
.++.|+|+|++|.++++.+ .+.|+++. ++|.+++ +... .. .|+.+ .++.++.++ +.|++|+|+|+..
T Consensus 85 ~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i-~GvpV~~~~dL~~~v~~~~Id~vIIAvPs~~ 160 (212)
T 3keo_A 85 TNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTE-DGIPVYGISTINDHLIDSDIETAILTVPSTE 160 (212)
T ss_dssp EEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCT-TCCBEEEGGGHHHHC-CCSCCEEEECSCGGG
T ss_pred CEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeE-CCeEEeCHHHHHHHHHHcCCCEEEEecCchh
Confidence 5799999999999999974 34566654 6799988 6533 11 24432 356667665 5899999999865
No 347
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=97.04 E-value=0.0005 Score=58.97 Aligned_cols=66 Identities=14% Similarity=0.123 Sum_probs=49.7
Q ss_pred CeEEEEc-cchhhHHHHHHHHhC-CCeEEEEeCChhHHHHHHhCCCCC-------cCCHHHHhhcCCEEEEeCCC
Q 021213 6 QSVGFIG-LGNMGFRMASNLMKA-GYKMAVHDVNCNVMKMFSDMGVPT-------KETPFEVAEASDVVITMLPS 71 (316)
Q Consensus 6 ~~IgiiG-~G~mG~~la~~l~~~-g~~V~~~~r~~~~~~~l~~~g~~~-------~~~~~~~~~~adivi~~vp~ 71 (316)
|||.|.| .|.+|+.+++.|.+. |++|++..|++++...+...++.. ..+..++++++|+||.+...
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 5899998 599999999999998 999999999988765554444221 12344567788998887643
No 348
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=97.03 E-value=0.00093 Score=58.98 Aligned_cols=69 Identities=16% Similarity=0.113 Sum_probs=48.8
Q ss_pred CCCCCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChh----HHHHHHh-------CCC-----CC--cCCHHHHhhcC
Q 021213 2 LFFDQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCN----VMKMFSD-------MGV-----PT--KETPFEVAEAS 62 (316)
Q Consensus 2 ~~~~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~----~~~~l~~-------~g~-----~~--~~~~~~~~~~a 62 (316)
.+++|+|.|.| .|.+|+.++..|.+.||+|++.+|++. ..+.+.+ .++ .. ..+..++++++
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 45568999998 599999999999999999999999543 3333332 221 11 12234566789
Q ss_pred CEEEEeCC
Q 021213 63 DVVITMLP 70 (316)
Q Consensus 63 divi~~vp 70 (316)
|+||-+..
T Consensus 102 d~Vih~A~ 109 (351)
T 3ruf_A 102 DHVLHQAA 109 (351)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 99988754
No 349
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=97.03 E-value=0.00048 Score=61.39 Aligned_cols=67 Identities=12% Similarity=0.224 Sum_probs=49.4
Q ss_pred CCCCeEEEEc-cchhhHHHHHHHHhC-CCeEEEEeCChhHHHHHHh-CCC-----CCc---CCHHHHhhcCCEEEEeC
Q 021213 3 FFDQSVGFIG-LGNMGFRMASNLMKA-GYKMAVHDVNCNVMKMFSD-MGV-----PTK---ETPFEVAEASDVVITML 69 (316)
Q Consensus 3 ~~~~~IgiiG-~G~mG~~la~~l~~~-g~~V~~~~r~~~~~~~l~~-~g~-----~~~---~~~~~~~~~adivi~~v 69 (316)
|++|+|.|.| .|.+|+.++..|.+. ||+|++.+|++++...+.+ .++ ... .+..++++++|+||-+.
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A 99 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLV 99 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECB
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcC
Confidence 3457899998 699999999999998 9999999998877655443 221 222 22345677899999854
No 350
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=97.03 E-value=0.013 Score=49.34 Aligned_cols=114 Identities=17% Similarity=0.128 Sum_probs=76.6
Q ss_pred CCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCC
Q 021213 48 GVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDS 127 (316)
Q Consensus 48 g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~~~~~~~g~ 127 (316)
|+..++|..|+++++|++|+-+|.... ..++++.+-+++ +.+.+|.++.|++|.....+-+.+.+.. .|
T Consensus 128 GVkVtsDD~EAvk~AEi~IlftPfG~~-t~~Iakkii~~l-----pEgAII~nTCTipp~~ly~~le~l~R~D----vg- 196 (358)
T 2b0j_A 128 GLKVTSDDREAVEGADIVITWLPKGNK-QPDIIKKFADAI-----PEGAIVTHACTIPTTKFAKIFKDLGRED----LN- 196 (358)
T ss_dssp TCEEESCHHHHHTTCSEEEECCTTCTT-HHHHHHHHGGGS-----CTTCEEEECSSSCHHHHHHHHHHTTCTT----SE-
T ss_pred CcEeecchHHHhcCCCEEEEecCCCCC-cHHHHHHHHhhC-----cCCCEEecccCCCHHHHHHHHHHhCccc----CC-
Confidence 578889999999999999999998764 456665554444 3677999999999876555555444321 22
Q ss_pred CCCccEEeccCCCChHhhhcCceEEEec-CCHHHHHHHHHHHHhcCCCeEeeC
Q 021213 128 WENPVMLDAPVSGGVLAAEAGTLTFMVG-GSEDAYQAAKPLFLSMGKNTIYCG 179 (316)
Q Consensus 128 ~~~~~~~~~p~~~~~~~~~~g~~~~~~~-~~~~~~~~v~~ll~~~g~~v~~~g 179 (316)
...|..+.+-|. .|+...--+ .++|+.+++.++.++.++.+|.+.
T Consensus 197 --IsS~HPaaVPgt-----~Gq~~~g~~yAtEEqIeklveLaksa~k~ay~vP 242 (358)
T 2b0j_A 197 --ITSYHPGCVPEM-----KGQVYIAEGYASEEAVNKLYEIGKIARGKAFKMP 242 (358)
T ss_dssp --EEECBCSSCTTT-----CCCEEEEESSSCHHHHHHHHHHHHHHHSCEEEEE
T ss_pred --eeccCCCCCCCC-----CCccccccccCCHHHHHHHHHHHHHhCCCeEecc
Confidence 012222222222 444232222 388999999999999999887653
No 351
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=97.02 E-value=0.0012 Score=57.04 Aligned_cols=67 Identities=19% Similarity=0.256 Sum_probs=49.9
Q ss_pred CCeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCCh-------hHHHHH---HhCCCCC-----c--CCHHHHhhcCCEEE
Q 021213 5 DQSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNC-------NVMKMF---SDMGVPT-----K--ETPFEVAEASDVVI 66 (316)
Q Consensus 5 ~~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~-------~~~~~l---~~~g~~~-----~--~~~~~~~~~adivi 66 (316)
+|+|.|.|+ |.+|..+++.|++.||+|++.+|++ ++.+.+ ...++.. . .+..++++++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 368999986 9999999999999999999999986 544333 3345321 1 23456678899999
Q ss_pred EeCCC
Q 021213 67 TMLPS 71 (316)
Q Consensus 67 ~~vp~ 71 (316)
.+.+.
T Consensus 82 ~~a~~ 86 (307)
T 2gas_A 82 CAAGR 86 (307)
T ss_dssp ECSSS
T ss_pred ECCcc
Confidence 98754
No 352
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=96.95 E-value=0.0017 Score=55.86 Aligned_cols=42 Identities=14% Similarity=0.188 Sum_probs=36.9
Q ss_pred CCCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHHH
Q 021213 4 FDQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 45 (316)
Q Consensus 4 ~~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~ 45 (316)
..+++.|+| +|.+|.+++..|++.|++|++++|++++.+.+.
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~ 160 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAA 160 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHH
Confidence 346789999 999999999999999999999999988776554
No 353
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=96.94 E-value=0.00086 Score=58.88 Aligned_cols=66 Identities=14% Similarity=0.111 Sum_probs=48.4
Q ss_pred CCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCC-----Cc--CCHHHHhhcCCEEEEeCC
Q 021213 5 DQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP-----TK--ETPFEVAEASDVVITMLP 70 (316)
Q Consensus 5 ~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~-----~~--~~~~~~~~~adivi~~vp 70 (316)
+|+|.|.| .|.+|+.+++.|++.||+|++.+|++++.+.+.+.++. .. .+..++++++|+||-+..
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 36899998 59999999999999999999999987765544432321 11 133456778999998753
No 354
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=96.91 E-value=0.0025 Score=53.13 Aligned_cols=66 Identities=9% Similarity=0.007 Sum_probs=48.9
Q ss_pred CCCeEEEEc-cchhhHHHHHHHHhC--CCeEEEEeCChhHHHHHHhCCCC-----Cc--CCHHHHhhcCCEEEEeCC
Q 021213 4 FDQSVGFIG-LGNMGFRMASNLMKA--GYKMAVHDVNCNVMKMFSDMGVP-----TK--ETPFEVAEASDVVITMLP 70 (316)
Q Consensus 4 ~~~~IgiiG-~G~mG~~la~~l~~~--g~~V~~~~r~~~~~~~l~~~g~~-----~~--~~~~~~~~~adivi~~vp 70 (316)
++|+|.|.| .|.+|..+++.|++. |++|++.+|++++.+.+ ..++. .. .+..++++++|+||-+..
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 78 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTS 78 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEecc
Confidence 457899998 699999999999999 89999999998776554 22221 11 233456678898888764
No 355
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=96.91 E-value=0.0046 Score=57.94 Aligned_cols=118 Identities=12% Similarity=0.080 Sum_probs=70.5
Q ss_pred CCCCeEEEEccchhhHH-HHHHHHhCCCeEEEEeCCh--hHHHHHHhCCCCCc--CCHHHHhhcCCEEEEe--CCCChhh
Q 021213 3 FFDQSVGFIGLGNMGFR-MASNLMKAGYKMAVHDVNC--NVMKMFSDMGVPTK--ETPFEVAEASDVVITM--LPSSSHQ 75 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~~-la~~l~~~g~~V~~~~r~~--~~~~~l~~~g~~~~--~~~~~~~~~adivi~~--vp~~~~~ 75 (316)
|..++|.|||.|..|.+ +|+.|.+.|++|+++|.+. ...+.|.+.|+... .+++++..++|+||.. +|.+...
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~~~~~d~vV~Spgi~~~~p~ 96 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHLQPAPDLVVVGNAMKRGMDV 96 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGGGCSCCSEEEECTTCCTTSHH
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHHcCCCCCEEEECCCcCCCCHH
Confidence 34589999999999975 8999999999999999853 34667888887653 3444554678999984 6654332
Q ss_pred HHHHhcCCCC------cccCCCCCCCeEEEEcCCCC-HHHHHHHHHHHhhch
Q 021213 76 VLDVYNGPNG------LLQGGNSVRPQLLIDSSTID-PQTSRNISAAVSNCI 120 (316)
Q Consensus 76 ~~~v~~~~~~------~~~~~~~~~~~~vi~~st~~-~~~~~~l~~~~~~~~ 120 (316)
++.....--+ ++.........+|-.+.|.. ..++.-+...+...+
T Consensus 97 l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~G 148 (524)
T 3hn7_A 97 IEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYAG 148 (524)
T ss_dssp HHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHcC
Confidence 4333221111 11100001223444454444 555666666666543
No 356
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=96.90 E-value=0.0028 Score=55.49 Aligned_cols=41 Identities=17% Similarity=0.221 Sum_probs=35.7
Q ss_pred CCCeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhHHHHH
Q 021213 4 FDQSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMF 44 (316)
Q Consensus 4 ~~~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l 44 (316)
..|+|.|.|+ |.+|+.++..|++.||+|++.+|++++.+.+
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 51 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANL 51 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHH
Confidence 3478999987 9999999999999999999999998765544
No 357
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=96.81 E-value=0.00049 Score=63.58 Aligned_cols=64 Identities=17% Similarity=0.331 Sum_probs=46.0
Q ss_pred CeEEEEccchhhHH--HHHHHHhC------CCeEEEEeCChhHHHHHH--------hCC----CCCcCCHHHHhhcCCEE
Q 021213 6 QSVGFIGLGNMGFR--MASNLMKA------GYKMAVHDVNCNVMKMFS--------DMG----VPTKETPFEVAEASDVV 65 (316)
Q Consensus 6 ~~IgiiG~G~mG~~--la~~l~~~------g~~V~~~~r~~~~~~~l~--------~~g----~~~~~~~~~~~~~adiv 65 (316)
|||+|||+|..|.+ +...++.. +.+|.++|+++++++... ..| +..++|..+++++||+|
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eAl~gAD~V 80 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEELNSPVKVVKTESLDEAIEGADFI 80 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHTTCSEE
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHhCCCCEE
Confidence 69999999998754 33334422 247999999998754321 122 34567899999999999
Q ss_pred EEeC
Q 021213 66 ITML 69 (316)
Q Consensus 66 i~~v 69 (316)
|++.
T Consensus 81 i~~~ 84 (477)
T 3u95_A 81 INTA 84 (477)
T ss_dssp EECC
T ss_pred EECc
Confidence 9975
No 358
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=96.81 E-value=0.0026 Score=57.64 Aligned_cols=67 Identities=16% Similarity=0.132 Sum_probs=45.3
Q ss_pred CCeEEEEccchh-hHHHHHHHHh--C---CCeEEEEeCChhHHHHHHh-------C--CCCCcCCHHHHhhcCCEEEEeC
Q 021213 5 DQSVGFIGLGNM-GFRMASNLMK--A---GYKMAVHDVNCNVMKMFSD-------M--GVPTKETPFEVAEASDVVITML 69 (316)
Q Consensus 5 ~~~IgiiG~G~m-G~~la~~l~~--~---g~~V~~~~r~~~~~~~l~~-------~--g~~~~~~~~~~~~~adivi~~v 69 (316)
+|||+|||+|.. +..+...|+. . +.+|.+||+++++++...+ . .+..+++..+++++||+||++.
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~~~~~~~~~~~~v~~t~d~~~al~~AD~Viita 81 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQF 81 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHHHHHHHhhCCeEEEEeCCHHHHhCCCCEEEEcC
Confidence 479999999995 2222334454 2 5689999999987543221 1 1223467778899999999987
Q ss_pred CC
Q 021213 70 PS 71 (316)
Q Consensus 70 p~ 71 (316)
..
T Consensus 82 gv 83 (417)
T 1up7_A 82 RP 83 (417)
T ss_dssp CT
T ss_pred CC
Confidence 44
No 359
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=96.79 E-value=0.00013 Score=64.83 Aligned_cols=91 Identities=15% Similarity=0.161 Sum_probs=52.4
Q ss_pred CCCeEEEEc-cchhhHHHHHHHHhCCCe---EEEEeCChhHHHHHHhCC--CCCcCCHHHHhhcCCEEEEeCCCChhhHH
Q 021213 4 FDQSVGFIG-LGNMGFRMASNLMKAGYK---MAVHDVNCNVMKMFSDMG--VPTKETPFEVAEASDVVITMLPSSSHQVL 77 (316)
Q Consensus 4 ~~~~IgiiG-~G~mG~~la~~l~~~g~~---V~~~~r~~~~~~~l~~~g--~~~~~~~~~~~~~adivi~~vp~~~~~~~ 77 (316)
|++||+||| .|+.|.-+.+.|.+++|+ +.........-+.+.-.| ........+.++++|+||.|+|.... +
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~s--~ 78 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAFEGVDIALFSAGSSTS--A 78 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETTEEEEEEECCTTTTTTCSEEEECSCHHHH--H
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecCCCceEeeCCHHHhcCCCEEEECCChHhH--H
Confidence 357999999 899999999999998763 343332111100000011 11111112235789999999997553 4
Q ss_pred HHhcCCCCcccCCCCCCCeEEEEcCCC
Q 021213 78 DVYNGPNGLLQGGNSVRPQLLIDSSTI 104 (316)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~vi~~st~ 104 (316)
+.... +++ .+..+||.|+.
T Consensus 79 ~~a~~---~~~-----~G~~vIDlSa~ 97 (366)
T 3pwk_A 79 KYAPY---AVK-----AGVVVVDNTSY 97 (366)
T ss_dssp HHHHH---HHH-----TTCEEEECSST
T ss_pred HHHHH---HHH-----CCCEEEEcCCc
Confidence 44332 222 45678898874
No 360
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=96.79 E-value=0.0012 Score=56.55 Aligned_cols=65 Identities=17% Similarity=0.215 Sum_probs=48.8
Q ss_pred CeEEEEcc-chhhHHHHHHHHhC--CCeEEEEeCChhHHHHHHhCCCCC-----c--CCHHHHhhcCCEEEEeCC
Q 021213 6 QSVGFIGL-GNMGFRMASNLMKA--GYKMAVHDVNCNVMKMFSDMGVPT-----K--ETPFEVAEASDVVITMLP 70 (316)
Q Consensus 6 ~~IgiiG~-G~mG~~la~~l~~~--g~~V~~~~r~~~~~~~l~~~g~~~-----~--~~~~~~~~~adivi~~vp 70 (316)
|+|.|.|+ |.+|+.+++.|.+. ||+|++.+|++++.+.+...++.. . .+..++++++|+||-+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 75 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISG 75 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence 57889986 99999999999998 999999999988776665544321 1 123456677888887654
No 361
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=96.78 E-value=0.0048 Score=57.35 Aligned_cols=114 Identities=16% Similarity=0.223 Sum_probs=69.0
Q ss_pred CeEEEEccchhhHH-HHHHHHhCCCeEEEEeCChh-HHHHHHhCCCCCcC-CHHHHhhcCCEEEEe--CCCChhhHHHHh
Q 021213 6 QSVGFIGLGNMGFR-MASNLMKAGYKMAVHDVNCN-VMKMFSDMGVPTKE-TPFEVAEASDVVITM--LPSSSHQVLDVY 80 (316)
Q Consensus 6 ~~IgiiG~G~mG~~-la~~l~~~g~~V~~~~r~~~-~~~~l~~~g~~~~~-~~~~~~~~adivi~~--vp~~~~~~~~v~ 80 (316)
++|.|||.|..|.+ +|+.|.+.|++|+++|.... ..+.+.+.|+.... ...+.+.++|+||+. +|.+...+....
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~~d~vV~Spgi~~~~p~~~~a~ 102 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVSTAISADNPEIVAAR 102 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEECTTSCTTCHHHHHHH
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEECCCCCCCCHHHHHHH
Confidence 68999999999985 99999999999999997544 45667888875432 122345679999984 665432133332
Q ss_pred cCCCCc------ccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhch
Q 021213 81 NGPNGL------LQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNCI 120 (316)
Q Consensus 81 ~~~~~~------~~~~~~~~~~~vi~~-st~~~~~~~~l~~~~~~~~ 120 (316)
..--++ +... .....+|-.+ |.++..++.-+...+...+
T Consensus 103 ~~gi~v~~~~e~l~~~-~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g 148 (494)
T 4hv4_A 103 EARIPVIRRAEMLAEL-MRYRHGIAVAGTHGKTTTTAMLSSIYAEAG 148 (494)
T ss_dssp HTTCCEEEHHHHHHHH-HTTSEEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred HCCCCEEcHHHHHHHH-hcCCCEEEEecCCChHHHHHHHHHHHHhcC
Confidence 211111 1100 0112344444 4444666666666666544
No 362
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=96.78 E-value=0.0017 Score=56.99 Aligned_cols=40 Identities=23% Similarity=0.348 Sum_probs=34.0
Q ss_pred CCCCCCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhH
Q 021213 1 MLFFDQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNV 40 (316)
Q Consensus 1 ~~~~~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~ 40 (316)
||.++|+|.|.| .|.+|..+++.|++.|++|++.+|+++.
T Consensus 1 ~M~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 41 (341)
T 3enk_A 1 SMSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNS 41 (341)
T ss_dssp -CCSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSS
T ss_pred CCCCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcc
Confidence 345568999997 6999999999999999999999987654
No 363
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.78 E-value=0.0022 Score=54.61 Aligned_cols=68 Identities=25% Similarity=0.286 Sum_probs=51.7
Q ss_pred CCeEEEEccchhhHHHHHHHHhCC-CeEEEEeCChhHHHHHHhC-----CCCCcCCHHHHhhcCCEEEEeCCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAG-YKMAVHDVNCNVMKMFSDM-----GVPTKETPFEVAEASDVVITMLPSS 72 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g-~~V~~~~r~~~~~~~l~~~-----g~~~~~~~~~~~~~adivi~~vp~~ 72 (316)
.+++.|+|+|-.+.+++..|.+.| .+|+++||+.++.+.+.+. .........+.++++|+||-|+|-.
T Consensus 125 ~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~G 198 (269)
T 3tum_A 125 GKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVG 198 (269)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTT
T ss_pred cCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCccc
Confidence 368999999999999999999999 4899999999998777652 1111122223356789999999854
No 364
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=96.77 E-value=0.002 Score=56.24 Aligned_cols=64 Identities=23% Similarity=0.269 Sum_probs=46.3
Q ss_pred CeEEEEcc-chhhHHHHHHHHhCCC--eEEEEeC--ChhHHHH----HHh----CC--CCCcC---CHHHHhhcCCEEEE
Q 021213 6 QSVGFIGL-GNMGFRMASNLMKAGY--KMAVHDV--NCNVMKM----FSD----MG--VPTKE---TPFEVAEASDVVIT 67 (316)
Q Consensus 6 ~~IgiiG~-G~mG~~la~~l~~~g~--~V~~~~r--~~~~~~~----l~~----~g--~~~~~---~~~~~~~~adivi~ 67 (316)
|||.|+|+ |.+|..++..|+..|+ ++.++|+ ++++.+. +.+ .+ ..... +..++++++|+||.
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~ 80 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII 80 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEE
Confidence 59999999 9999999999998884 6899999 7654321 222 11 12221 24778999999999
Q ss_pred eC
Q 021213 68 ML 69 (316)
Q Consensus 68 ~v 69 (316)
+.
T Consensus 81 ~A 82 (313)
T 1hye_A 81 TS 82 (313)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 365
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.75 E-value=0.0026 Score=53.60 Aligned_cols=34 Identities=35% Similarity=0.453 Sum_probs=30.4
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNC 38 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~ 38 (316)
..+|.|||+|.+|+.++..|++.|. +++++|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4689999999999999999999995 799998764
No 366
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.75 E-value=0.0012 Score=55.04 Aligned_cols=34 Identities=26% Similarity=0.407 Sum_probs=31.3
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC 38 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~ 38 (316)
+-.|.|||+|.-|...|..|+++|++|+++++.+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4469999999999999999999999999999864
No 367
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.73 E-value=0.0013 Score=59.04 Aligned_cols=35 Identities=34% Similarity=0.466 Sum_probs=32.4
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCN 39 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~ 39 (316)
+|||.|||+|-.|..+|..|+++|++|++++|++.
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 47999999999999999999999999999998653
No 368
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=96.73 E-value=0.002 Score=55.85 Aligned_cols=66 Identities=11% Similarity=0.200 Sum_probs=39.5
Q ss_pred CCCeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhc--CCEEEEeCC
Q 021213 4 FDQSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEA--SDVVITMLP 70 (316)
Q Consensus 4 ~~~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~--adivi~~vp 70 (316)
|.|+|.|.|+ |.+|..+++.|++.||+|++.+|+++.-. ....-+.-..+..++++. +|+||-+..
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 69 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPK-FEQVNLLDSNAVHHIIHDFQPHVIVHCAA 69 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-------------------CHHHHHHHCCSEEEECC-
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCC-eEEecCCCHHHHHHHHHhhCCCEEEECCc
Confidence 3578999987 99999999999999999999998755311 111111112334455654 899988753
No 369
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.73 E-value=0.00091 Score=49.68 Aligned_cols=70 Identities=14% Similarity=0.140 Sum_probs=54.9
Q ss_pred CCeEEEEcc----chhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHh
Q 021213 5 DQSVGFIGL----GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVY 80 (316)
Q Consensus 5 ~~~IgiiG~----G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~ 80 (316)
+++|+|||+ +.+|..+.++|.+.||+|+-.++..+.+ .|.....|+.++-. .|++++++|... +.+++
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i-----~G~~~y~sl~dlp~-vDlavi~~p~~~--v~~~v 75 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEV-----LGKTIINERPVIEG-VDTVTLYINPQN--QLSEY 75 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEE-----TTEECBCSCCCCTT-CCEEEECSCHHH--HGGGH
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcC-----CCeeccCChHHCCC-CCEEEEEeCHHH--HHHHH
Confidence 368999998 5789999999999999999888764432 36666778888777 999999999654 56666
Q ss_pred cC
Q 021213 81 NG 82 (316)
Q Consensus 81 ~~ 82 (316)
++
T Consensus 76 ~e 77 (122)
T 3ff4_A 76 NY 77 (122)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 370
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=96.73 E-value=0.0014 Score=58.68 Aligned_cols=66 Identities=18% Similarity=0.164 Sum_probs=46.7
Q ss_pred CCCeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCC-----Cc--CCHHHHhhcCCEEEEeC
Q 021213 4 FDQSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP-----TK--ETPFEVAEASDVVITML 69 (316)
Q Consensus 4 ~~~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~-----~~--~~~~~~~~~adivi~~v 69 (316)
++|+|.|.|+ |.+|..++..|++.||+|++.+|+++........++. .. .+..++++.+|+||-+.
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A 101 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLA 101 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECc
Confidence 3478999987 9999999999999999999999986543222212211 11 12345667889888864
No 371
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=96.70 E-value=0.0016 Score=57.18 Aligned_cols=65 Identities=17% Similarity=0.192 Sum_probs=48.6
Q ss_pred CCeEEEEc-cchhhHHHHHHHHhCCC--e-----EEEEeCChh--H----HHHHHhCC------CCCcCCHHHHhhcCCE
Q 021213 5 DQSVGFIG-LGNMGFRMASNLMKAGY--K-----MAVHDVNCN--V----MKMFSDMG------VPTKETPFEVAEASDV 64 (316)
Q Consensus 5 ~~~IgiiG-~G~mG~~la~~l~~~g~--~-----V~~~~r~~~--~----~~~l~~~g------~~~~~~~~~~~~~adi 64 (316)
++||.|+| +|.+|..++..|+..+. + +.++|+++. + +..+.+.. +...++..+.+++||+
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~daDv 82 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDV 82 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSE
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCCCCE
Confidence 47999999 89999999999998775 5 999999742 2 23344421 2334567788999999
Q ss_pred EEEeC
Q 021213 65 VITML 69 (316)
Q Consensus 65 vi~~v 69 (316)
||++-
T Consensus 83 VvitA 87 (333)
T 5mdh_A 83 AILVG 87 (333)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 99963
No 372
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=96.69 E-value=0.00082 Score=57.97 Aligned_cols=58 Identities=14% Similarity=0.091 Sum_probs=42.2
Q ss_pred CeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeC
Q 021213 6 QSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITML 69 (316)
Q Consensus 6 ~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~v 69 (316)
|||.|.|+ |.+|+.+++.|.+.||+|++..|++...+ +.......+.++++|.||=+.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~------~~~~~~~~~~l~~~d~vihla 59 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGR------ITWDELAASGLPSCDAAVNLA 59 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTE------EEHHHHHHHCCCSCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCe------eecchhhHhhccCCCEEEEec
Confidence 79999987 99999999999999999999999765310 000011223456788887654
No 373
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=96.67 E-value=0.00018 Score=63.43 Aligned_cols=89 Identities=11% Similarity=0.036 Sum_probs=51.5
Q ss_pred CCeEEEEc-cchhhHHHHHHHHhCC---CeEEEEe-C-ChhHHHHHHhCCCCCcC-CHHHHhhcCCEEEEeCCCChhhHH
Q 021213 5 DQSVGFIG-LGNMGFRMASNLMKAG---YKMAVHD-V-NCNVMKMFSDMGVPTKE-TPFEVAEASDVVITMLPSSSHQVL 77 (316)
Q Consensus 5 ~~~IgiiG-~G~mG~~la~~l~~~g---~~V~~~~-r-~~~~~~~l~~~g~~~~~-~~~~~~~~adivi~~vp~~~~~~~ 77 (316)
++||+|+| .|++|..+.+.|.+++ +++.... + +..+.-.+....+.... ++ +.++++|+||.|+|.... .
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~~-~~~~~vDvVf~a~g~~~s--~ 79 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEE-FDWSQVHIALFSAGGELS--A 79 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEEEGGG-CCGGGCSEEEECSCHHHH--H
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEecCCh-HHhcCCCEEEECCCchHH--H
Confidence 47999999 9999999999999874 4555554 2 22110001111111111 12 234689999999997543 3
Q ss_pred HHhcCCCCcccCCCCCCCeEEEEcCCC
Q 021213 78 DVYNGPNGLLQGGNSVRPQLLIDSSTI 104 (316)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~vi~~st~ 104 (316)
+.... +++ .+..+||.|+.
T Consensus 80 ~~a~~---~~~-----~G~~vId~s~~ 98 (336)
T 2r00_A 80 KWAPI---AAE-----AGVVVIDNTSH 98 (336)
T ss_dssp HHHHH---HHH-----TTCEEEECSST
T ss_pred HHHHH---HHH-----cCCEEEEcCCc
Confidence 33322 222 34577887764
No 374
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=96.60 E-value=0.00095 Score=55.56 Aligned_cols=37 Identities=19% Similarity=0.285 Sum_probs=32.8
Q ss_pred CCCeEEEEc-cchhhHHHHHHHHhCCC--eEEEEeCChhH
Q 021213 4 FDQSVGFIG-LGNMGFRMASNLMKAGY--KMAVHDVNCNV 40 (316)
Q Consensus 4 ~~~~IgiiG-~G~mG~~la~~l~~~g~--~V~~~~r~~~~ 40 (316)
..|+|.|.| .|.+|..+++.|++.|+ +|++.+|++++
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~ 56 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLT 56 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCC
Confidence 347899998 69999999999999999 99999998764
No 375
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=96.57 E-value=0.00081 Score=60.11 Aligned_cols=93 Identities=15% Similarity=0.153 Sum_probs=53.8
Q ss_pred CCCCeEEEEc-cchhhHHHHHHHHhCC-CeEE-EEe-CC-hh-HHHHHHh-----------CCCCCc-CCHHHHhhcCCE
Q 021213 3 FFDQSVGFIG-LGNMGFRMASNLMKAG-YKMA-VHD-VN-CN-VMKMFSD-----------MGVPTK-ETPFEVAEASDV 64 (316)
Q Consensus 3 ~~~~~IgiiG-~G~mG~~la~~l~~~g-~~V~-~~~-r~-~~-~~~~l~~-----------~g~~~~-~~~~~~~~~adi 64 (316)
|+++||+|+| .|+.|.-|.+.|.++- .++. ++. ++ .- ++..... ...... .+..+.++++|+
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~~~~Dv 96 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPEGNFLECDV 96 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSCTTGGGCSE
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchhhhcccCCE
Confidence 3457899999 6999999999988765 3564 342 22 11 2221100 011111 112214578999
Q ss_pred EEEeCCCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCC
Q 021213 65 VITMLPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTID 105 (316)
Q Consensus 65 vi~~vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~ 105 (316)
||+|+|.... ++....+ ++ .+..+||.|+..
T Consensus 97 vf~alp~~~s--~~~~~~~---~~-----~G~~VIDlSa~f 127 (381)
T 3hsk_A 97 VFSGLDADVA--GDIEKSF---VE-----AGLAVVSNAKNY 127 (381)
T ss_dssp EEECCCHHHH--HHHHHHH---HH-----TTCEEEECCSTT
T ss_pred EEECCChhHH--HHHHHHH---Hh-----CCCEEEEcCCcc
Confidence 9999997653 4444322 21 456788988754
No 376
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=96.52 E-value=0.0045 Score=54.61 Aligned_cols=68 Identities=15% Similarity=0.139 Sum_probs=50.0
Q ss_pred CCCCeEEEEc-cchhhHHHHHHHHhC-CC-eEEEEeCChhHHHHHHh----CCC-----CCc--CCHHHHhhcCCEEEEe
Q 021213 3 FFDQSVGFIG-LGNMGFRMASNLMKA-GY-KMAVHDVNCNVMKMFSD----MGV-----PTK--ETPFEVAEASDVVITM 68 (316)
Q Consensus 3 ~~~~~IgiiG-~G~mG~~la~~l~~~-g~-~V~~~~r~~~~~~~l~~----~g~-----~~~--~~~~~~~~~adivi~~ 68 (316)
+..|+|.|.| .|.+|..+++.|++. |+ +|++++|++.+...+.+ .++ ... .+..++++.+|+||-+
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~ 98 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHA 98 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEEC
Confidence 3457899998 599999999999999 97 99999999887665543 121 111 2234567789999987
Q ss_pred CC
Q 021213 69 LP 70 (316)
Q Consensus 69 vp 70 (316)
..
T Consensus 99 Aa 100 (344)
T 2gn4_A 99 AA 100 (344)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 377
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=96.52 E-value=0.0061 Score=53.72 Aligned_cols=63 Identities=14% Similarity=0.317 Sum_probs=47.4
Q ss_pred CeEEEEcc-chhhHHHHHHHHhCCC-------eEEEEeCChhH--H----HHHHhC------CCCCcCCHHHHhhcCCEE
Q 021213 6 QSVGFIGL-GNMGFRMASNLMKAGY-------KMAVHDVNCNV--M----KMFSDM------GVPTKETPFEVAEASDVV 65 (316)
Q Consensus 6 ~~IgiiG~-G~mG~~la~~l~~~g~-------~V~~~~r~~~~--~----~~l~~~------g~~~~~~~~~~~~~adiv 65 (316)
-||+|+|+ |.+|.+++-.|+.... ++.+||+++.. + ..+..- .+...+++.+++++||+|
T Consensus 25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~advV 104 (345)
T 4h7p_A 25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDGVAIA 104 (345)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTTTCSEE
T ss_pred CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhCCCCEE
Confidence 49999996 9999999998887643 79999997642 1 223332 133456788899999999
Q ss_pred EEe
Q 021213 66 ITM 68 (316)
Q Consensus 66 i~~ 68 (316)
|++
T Consensus 105 vi~ 107 (345)
T 4h7p_A 105 IMC 107 (345)
T ss_dssp EEC
T ss_pred EEC
Confidence 996
No 378
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=96.52 E-value=0.0012 Score=58.76 Aligned_cols=66 Identities=17% Similarity=0.196 Sum_probs=43.2
Q ss_pred CCeEEEEccchhhHHHHHHHHhCC----CeE-EEEeCChhHHHHHHhC--CCCCcCCHHHHhhcC---------------
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAG----YKM-AVHDVNCNVMKMFSDM--GVPTKETPFEVAEAS--------------- 62 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g----~~V-~~~~r~~~~~~~l~~~--g~~~~~~~~~~~~~a--------------- 62 (316)
++||||||+|.||+.++..|.+.. .+| .++|++... +.+. |+..+++..+++++.
T Consensus 4 ~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~~---~~~~~~gi~~~~~~~e~l~~~~~~~~did~v~e~~~ 80 (358)
T 1ebf_A 4 VVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSL---ISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHLK 80 (358)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEE---ECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHHHT
T ss_pred eEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChhh---hccccCCCCccccHHHHHhcccCCCCCHHHHHHHhh
Confidence 468999999999999999999863 344 345654321 2222 554445666665443
Q ss_pred -----CEEEEeCCCCh
Q 021213 63 -----DVVITMLPSSS 73 (316)
Q Consensus 63 -----divi~~vp~~~ 73 (316)
|+|+.|+|+..
T Consensus 81 ~~~~~DvVV~~t~~~~ 96 (358)
T 1ebf_A 81 TSPKPVILVDNTSSAY 96 (358)
T ss_dssp TCSSCEEEEECSCCHH
T ss_pred hccCCcEEEEcCCChH
Confidence 67777887654
No 379
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=96.51 E-value=0.003 Score=57.82 Aligned_cols=65 Identities=20% Similarity=0.272 Sum_probs=48.4
Q ss_pred CCCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhH--HHHHHhCCCCCc--CCHHHHhhcCCEEEEe
Q 021213 3 FFDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNV--MKMFSDMGVPTK--ETPFEVAEASDVVITM 68 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~--~~~l~~~g~~~~--~~~~~~~~~adivi~~ 68 (316)
+..+||.|||+|..|.+.++.|.+.||+|+++|..... ...+. .|++.. ....+.++.+|.||++
T Consensus 3 ~~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~~~~~~~~d~vV~s 71 (439)
T 2x5o_A 3 YQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLNDEWLMAADLIVAS 71 (439)
T ss_dssp CTTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCCHHHHHTCSEEEEC
T ss_pred CCCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCcHHHhccCCEEEeC
Confidence 34578999999999999999999999999999975432 12344 566542 2135566689999886
No 380
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=96.46 E-value=0.0065 Score=54.29 Aligned_cols=66 Identities=23% Similarity=0.305 Sum_probs=50.8
Q ss_pred CeEEEEccchhhH-HHHHHHHhCCCeEEEEeCChhHHHHHHhCC------------------CCCc----CCHHHHhhcC
Q 021213 6 QSVGFIGLGNMGF-RMASNLMKAGYKMAVHDVNCNVMKMFSDMG------------------VPTK----ETPFEVAEAS 62 (316)
Q Consensus 6 ~~IgiiG~G~mG~-~la~~l~~~g~~V~~~~r~~~~~~~l~~~g------------------~~~~----~~~~~~~~~a 62 (316)
||+..+|+|++|+ .++..|.++|++|+..|++...++.+++.| ++.. ...-+.+.++
T Consensus 1 mkavhfGaGniGRGfig~~l~~~g~~v~f~dv~~~~i~~Ln~~~~Y~V~~~g~~~~~~~v~~v~ai~s~~~~~~~~i~~a 80 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADAGIQLTFADVNQVVLDALNARHSYQVHVVGETEQVDTVSGVNAVSSIGDDVVDLIAQV 80 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHTTCEEEEEESCHHHHHHHHHHSEEEEEEESSSEEEEEEESCEEEETTSSHHHHHHTTC
T ss_pred CcEEEECCCccchhhHHHHHHHcCCeEEEEeCCHHHHHHHhcCCCEEEEEccCCcceEEEEEEEEEeCcHHHHHHHHcCC
Confidence 6899999999995 455667889999999999999999998754 2211 1233466789
Q ss_pred CEEEEeCCC
Q 021213 63 DVVITMLPS 71 (316)
Q Consensus 63 divi~~vp~ 71 (316)
|+|.+++..
T Consensus 81 dlitT~vG~ 89 (382)
T 3h2z_A 81 DLVTTAVGP 89 (382)
T ss_dssp SEEEECCCH
T ss_pred CEEEECCCc
Confidence 999888863
No 381
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=96.43 E-value=0.0032 Score=56.68 Aligned_cols=39 Identities=21% Similarity=0.180 Sum_probs=34.4
Q ss_pred CCCCCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChh
Q 021213 1 MLFFDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCN 39 (316)
Q Consensus 1 ~~~~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~ 39 (316)
|.+++++|.|||.|..|.++|..|++.|++|+++++.+.
T Consensus 1 M~~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 1 MSPTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp -CCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 566668999999999999999999999999999998643
No 382
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=96.43 E-value=0.003 Score=53.82 Aligned_cols=64 Identities=13% Similarity=0.227 Sum_probs=47.0
Q ss_pred eEEEEcc-chhhHHHHHHHHhC--CCeEEEEeCChhHHHHHHhCCCCC-----c--CCHHHHhhcCCEEEEeCC
Q 021213 7 SVGFIGL-GNMGFRMASNLMKA--GYKMAVHDVNCNVMKMFSDMGVPT-----K--ETPFEVAEASDVVITMLP 70 (316)
Q Consensus 7 ~IgiiG~-G~mG~~la~~l~~~--g~~V~~~~r~~~~~~~l~~~g~~~-----~--~~~~~~~~~adivi~~vp 70 (316)
+|.|.|+ |.+|+.+++.|.+. |++|++.+|++++.+.+...++.. . .+..++++++|+||-+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 4788986 99999999999998 999999999988766555444321 1 123456677888887653
No 383
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=96.42 E-value=0.007 Score=51.99 Aligned_cols=34 Identities=26% Similarity=0.431 Sum_probs=30.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhCC-CeEEEEeCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAG-YKMAVHDVNC 38 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g-~~V~~~~r~~ 38 (316)
..+|.|||+|..|+.++..|+++| -+++++|.+.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 468999999999999999999999 4799999875
No 384
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=96.40 E-value=0.0038 Score=55.35 Aligned_cols=37 Identities=24% Similarity=0.427 Sum_probs=32.5
Q ss_pred CCCCCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCC
Q 021213 1 MLFFDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVN 37 (316)
Q Consensus 1 ~~~~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~ 37 (316)
||.++.+|.|||.|.+|.+.|..|++.|++|+++++.
T Consensus 2 ~m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 2 MMHSQKRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp CCCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 3334568999999999999999999999999999975
No 385
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=96.39 E-value=0.01 Score=51.90 Aligned_cols=68 Identities=18% Similarity=0.211 Sum_probs=45.2
Q ss_pred CCCCCCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHH---HHHHhC------------CCCCcCCHHHHhhcCCE
Q 021213 1 MLFFDQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVM---KMFSDM------------GVPTKETPFEVAEASDV 64 (316)
Q Consensus 1 ~~~~~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~---~~l~~~------------g~~~~~~~~~~~~~adi 64 (316)
|...+++|.|.| +|.+|+.++..|++.||+|++..|+++.. ..+.+. .+.-..+..++++++|+
T Consensus 1 ~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (337)
T 2c29_D 1 MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTG 80 (337)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSE
T ss_pred CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCE
Confidence 444557899998 89999999999999999999988887632 222111 11222345567778888
Q ss_pred EEEe
Q 021213 65 VITM 68 (316)
Q Consensus 65 vi~~ 68 (316)
||-+
T Consensus 81 Vih~ 84 (337)
T 2c29_D 81 VFHV 84 (337)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8764
No 386
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.34 E-value=0.006 Score=53.87 Aligned_cols=75 Identities=23% Similarity=0.332 Sum_probs=57.9
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCc-CCHHHHhhcCCEEEEeCCCChhhHHHHhc
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTK-ETPFEVAEASDVVITMLPSSSHQVLDVYN 81 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~-~~~~~~~~~adivi~~vp~~~~~~~~v~~ 81 (316)
.+|.|+|+|.+|...++.+...|.+|++.++++++.+.+.+.|.... .+.+++.+..|+||-|+..... +...+.
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~~-~~~~~~ 253 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHYD-LKDYLK 253 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCCC-HHHHHT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHHH-HHHHHH
Confidence 68999999999999999988899999999999999998888886432 3333333367888888876633 555554
No 387
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.33 E-value=0.029 Score=50.04 Aligned_cols=45 Identities=20% Similarity=0.338 Sum_probs=40.1
Q ss_pred CeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHHhCCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMGVP 50 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~~~g~~ 50 (316)
.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+.+.|+.
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~ 242 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT 242 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc
Confidence 579999999999999998888898 899999999999888887754
No 388
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=96.32 E-value=0.015 Score=51.37 Aligned_cols=31 Identities=16% Similarity=0.343 Sum_probs=25.5
Q ss_pred CCeEEEEccchhhHHHHHHHHhC-CCeEEEEe
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKA-GYKMAVHD 35 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~-g~~V~~~~ 35 (316)
++||||+|.|++|..+.+.|.++ ..+|...+
T Consensus 17 ~ikVgI~G~G~iGr~llR~l~~~p~veivain 48 (354)
T 3cps_A 17 QGTLGINGFGRIGRLVLRACMERNDITVVAIN 48 (354)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCSSCEEEEEE
T ss_pred ceEEEEECCCHHHHHHHHHHHcCCCeEEEEec
Confidence 36999999999999999999876 46766554
No 389
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=96.30 E-value=0.0028 Score=54.13 Aligned_cols=58 Identities=16% Similarity=0.237 Sum_probs=42.2
Q ss_pred CCCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhh--cCCEEEEeC
Q 021213 4 FDQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITML 69 (316)
Q Consensus 4 ~~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~adivi~~v 69 (316)
|+|+|.|.| .|.+|..++..|.+.||+|++.+|.+-. +.-..+..++++ .+|+||-+.
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~D--------~~d~~~~~~~~~~~~~d~vi~~a 64 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLD--------ITNISQVQQVVQEIRPHIIIHCA 64 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTTTSC--------TTCHHHHHHHHHHHCCSEEEECC
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhCCCEEEEecccccC--------CCCHHHHHHHHHhcCCCEEEECC
Confidence 446899998 5999999999999999999999984211 111123344555 589998864
No 390
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.30 E-value=0.014 Score=51.38 Aligned_cols=87 Identities=20% Similarity=0.206 Sum_probs=56.7
Q ss_pred CeEEEEc-cchhhHHHHHHHHhCC-CeEEEEeCChh---HHHH----HHhCCCCCc-CCHHHHhhcCCEEEEeCCCChhh
Q 021213 6 QSVGFIG-LGNMGFRMASNLMKAG-YKMAVHDVNCN---VMKM----FSDMGVPTK-ETPFEVAEASDVVITMLPSSSHQ 75 (316)
Q Consensus 6 ~~IgiiG-~G~mG~~la~~l~~~g-~~V~~~~r~~~---~~~~----l~~~g~~~~-~~~~~~~~~adivi~~vp~~~~~ 75 (316)
-||+||| .|+.|.-+.+.|.++. .++.......+ ++.. +. ...... .+.++..+++|++|+|+|....
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~-~~l~~~~~~~~~~~~~~Dvvf~alp~~~s- 91 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTL-ENSILSEFDPEKVSKNCDVLFTALPAGAS- 91 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGC-CCCBCBCCCHHHHHHHCSEEEECCSTTHH-
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhc-cCceEEeCCHHHhhcCCCEEEECCCcHHH-
Confidence 4899996 6999999999999875 35655543222 1221 11 122221 2455555789999999998764
Q ss_pred HHHHhcCCCCcccCCCCCCCeEEEEcCCCC
Q 021213 76 VLDVYNGPNGLLQGGNSVRPQLLIDSSTID 105 (316)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~vi~~st~~ 105 (316)
++....+ .+..|||.|+..
T Consensus 92 -~~~~~~~----------~g~~VIDlSsdf 110 (351)
T 1vkn_A 92 -YDLVREL----------KGVKIIDLGADF 110 (351)
T ss_dssp -HHHHTTC----------CSCEEEESSSTT
T ss_pred -HHHHHHh----------CCCEEEECChhh
Confidence 5555432 345899999864
No 391
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.27 E-value=0.013 Score=52.30 Aligned_cols=75 Identities=20% Similarity=0.274 Sum_probs=53.8
Q ss_pred CeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHHhCCCCCc-------CCHHHHhh-----cCCEEEEeCCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMGVPTK-------ETPFEVAE-----ASDVVITMLPSS 72 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~~~g~~~~-------~~~~~~~~-----~adivi~~vp~~ 72 (316)
.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+.+.|+..+ .+..+.++ ..|+||-|+...
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~ 274 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNV 274 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCCCH
Confidence 579999999999999998888898 89999999999998888876432 12222221 367777777654
Q ss_pred hhhHHHHhc
Q 021213 73 SHQVLDVYN 81 (316)
Q Consensus 73 ~~~~~~v~~ 81 (316)
.. +...+.
T Consensus 275 ~~-~~~~~~ 282 (378)
T 3uko_A 275 SV-MRAALE 282 (378)
T ss_dssp HH-HHHHHH
T ss_pred HH-HHHHHH
Confidence 33 444443
No 392
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.27 E-value=0.0016 Score=61.74 Aligned_cols=67 Identities=16% Similarity=0.092 Sum_probs=48.6
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCC--CC--cCCHHH-HhhcCCEEEEeCCCCh
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGV--PT--KETPFE-VAEASDVVITMLPSSS 73 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~--~~--~~~~~~-~~~~adivi~~vp~~~ 73 (316)
++|.|+|+|.+|..+++.|.+.|++|++.|+++++++.+. .-+ .. ...+.+ -++++|.+|++++++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~-~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~ 420 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDH-VVVYGDATVGQTLRQAGIDRASGIIVTTNDDS 420 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS-CEEESCSSSSTHHHHHTTTSCSEEEECCSCHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcC-CEEEeCCCCHHHHHhcCccccCEEEEECCCch
Confidence 6799999999999999999999999999999998765432 100 11 111111 2357888888887754
No 393
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.25 E-value=0.027 Score=50.17 Aligned_cols=74 Identities=15% Similarity=0.229 Sum_probs=52.6
Q ss_pred CeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHHhCCCCCcC-------CHHHHhh-----cCCEEEEeCCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMGVPTKE-------TPFEVAE-----ASDVVITMLPSS 72 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~~~g~~~~~-------~~~~~~~-----~adivi~~vp~~ 72 (316)
.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+++.|+...- +..+.+. ..|+||-|+...
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~ 272 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRI 272 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCCH
Confidence 579999999999999988888887 899999999999888888764221 2222221 467777777643
Q ss_pred hhhHHHHh
Q 021213 73 SHQVLDVY 80 (316)
Q Consensus 73 ~~~~~~v~ 80 (316)
.. +...+
T Consensus 273 ~~-~~~~~ 279 (373)
T 1p0f_A 273 ET-MMNAL 279 (373)
T ss_dssp HH-HHHHH
T ss_pred HH-HHHHH
Confidence 32 34444
No 394
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=96.24 E-value=0.011 Score=52.14 Aligned_cols=67 Identities=13% Similarity=0.121 Sum_probs=47.1
Q ss_pred CCCeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChh----HHHHHHh-------CCC-----CCc--CCHHHHhhcCCE
Q 021213 4 FDQSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCN----VMKMFSD-------MGV-----PTK--ETPFEVAEASDV 64 (316)
Q Consensus 4 ~~~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~----~~~~l~~-------~g~-----~~~--~~~~~~~~~adi 64 (316)
.+|+|.|.|+ |.+|..++..|++.|++|++.+|++. ..+.+.+ .++ ... .+..++++.+|+
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 105 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY 105 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCE
Confidence 3478999987 99999999999999999999998653 3333321 221 111 123456678899
Q ss_pred EEEeCC
Q 021213 65 VITMLP 70 (316)
Q Consensus 65 vi~~vp 70 (316)
||-+..
T Consensus 106 vih~A~ 111 (352)
T 1sb8_A 106 VLHQAA 111 (352)
T ss_dssp EEECCS
T ss_pred EEECCc
Confidence 988754
No 395
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=96.21 E-value=0.0056 Score=55.61 Aligned_cols=89 Identities=15% Similarity=0.215 Sum_probs=60.2
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC---eEEEEe----CC----hh-HHHHHHh-------C-CCC-CcCCHHHHhhcCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY---KMAVHD----VN----CN-VMKMFSD-------M-GVP-TKETPFEVAEASD 63 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~---~V~~~~----r~----~~-~~~~l~~-------~-g~~-~~~~~~~~~~~ad 63 (316)
..+|.|+|+|.+|.+++..|.+.|. +|+++| |+ .. ..+.+.+ . ... ...++.++++++|
T Consensus 186 ~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~aD 265 (439)
T 2dvm_A 186 EITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEALKDAD 265 (439)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTTCS
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHHhccCC
Confidence 4689999999999999999999997 799999 87 32 2111221 1 111 2356788899999
Q ss_pred EEEEeCCC--ChhhHHHHhcCCCCcccCCCCCCCeEEEEcCC
Q 021213 64 VVITMLPS--SSHQVLDVYNGPNGLLQGGNSVRPQLLIDSST 103 (316)
Q Consensus 64 ivi~~vp~--~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st 103 (316)
++|-++|. ... .++.+.. + .++.+|+|+++
T Consensus 266 VlInaT~~~~G~~-~~e~v~~----m-----~~~~iVfDLyn 297 (439)
T 2dvm_A 266 VLISFTRPGPGVI-KPQWIEK----M-----NEDAIVFPLAN 297 (439)
T ss_dssp EEEECSCCCSSSS-CHHHHTT----S-----CTTCEEEECCS
T ss_pred EEEEcCCCccCCC-ChHHHHh----c-----CCCCEEEECCC
Confidence 99999986 321 1233322 1 23458999954
No 396
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=96.19 E-value=0.0056 Score=54.46 Aligned_cols=91 Identities=18% Similarity=0.173 Sum_probs=63.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCCh-------hHHHHH----Hh--CCCCCcCCHHHHhhcCCEEEEeC-
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNC-------NVMKMF----SD--MGVPTKETPFEVAEASDVVITML- 69 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~-------~~~~~l----~~--~g~~~~~~~~~~~~~adivi~~v- 69 (316)
..||.|+|+|..|.++++.+...|. +|+++|++. +.+..+ .. .......++.|+++.+|++|=+.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~IG~Sa 267 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIFIGVSA 267 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSEEECCS
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEEEecCC
Confidence 4689999999999999999999997 999999873 112111 11 11112457899999999988753
Q ss_pred CCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCCH
Q 021213 70 PSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDP 106 (316)
Q Consensus 70 p~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~ 106 (316)
|.-. .+++++.++ ++.+|+++|+-.|
T Consensus 268 pgl~--T~EmVk~Ma---------~~pIIfalsNPt~ 293 (398)
T 2a9f_A 268 PGVL--KAEWISKMA---------ARPVIFAMANPIP 293 (398)
T ss_dssp TTCC--CHHHHHTSC---------SSCEEEECCSSSC
T ss_pred CCCC--CHHHHHhhC---------CCCEEEECCCCCc
Confidence 3333 567776542 4459999998654
No 397
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.17 E-value=0.036 Score=49.37 Aligned_cols=45 Identities=20% Similarity=0.351 Sum_probs=40.0
Q ss_pred CeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHHhCCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMGVP 50 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~~~g~~ 50 (316)
.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+++.|+.
T Consensus 194 ~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~ 239 (374)
T 1cdo_A 194 STCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT 239 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCc
Confidence 579999999999999998888998 899999999999888887754
No 398
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.15 E-value=0.029 Score=49.94 Aligned_cols=45 Identities=20% Similarity=0.381 Sum_probs=39.9
Q ss_pred CeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHHhCCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMGVP 50 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~~~g~~ 50 (316)
.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+++.|+.
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~ 238 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc
Confidence 579999999999999998888998 899999999999888877754
No 399
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=96.15 E-value=0.0043 Score=53.56 Aligned_cols=65 Identities=15% Similarity=0.197 Sum_probs=44.6
Q ss_pred CCCeEEEEcc-chhhHHHHHHHHhC--CCeEEEEeCChhHHHHHHhCCCC-----Cc--CCHHHHhh--cCCEEEEeCC
Q 021213 4 FDQSVGFIGL-GNMGFRMASNLMKA--GYKMAVHDVNCNVMKMFSDMGVP-----TK--ETPFEVAE--ASDVVITMLP 70 (316)
Q Consensus 4 ~~~~IgiiG~-G~mG~~la~~l~~~--g~~V~~~~r~~~~~~~l~~~g~~-----~~--~~~~~~~~--~adivi~~vp 70 (316)
|+|+|.|.|+ |.+|+.+++.|.+. ||+|++.+|++...+ +.+ ++. .. .+..++++ .+|+||-+..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~-~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~ 77 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VVN-SGPFEVVNALDFNQIEHLVEVHKITDIYLMAA 77 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HHH-SSCEEECCTTCHHHHHHHHHHTTCCEEEECCC
T ss_pred CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-ccC-CCceEEecCCCHHHHHHHHhhcCCCEEEECCc
Confidence 3578999987 99999999999998 899999999766532 211 111 11 12334555 6788877643
No 400
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.14 E-value=0.0091 Score=56.43 Aligned_cols=67 Identities=15% Similarity=0.133 Sum_probs=52.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhC-CCCC---cCCHHHH-----hhcCCEEEEeCCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-GVPT---KETPFEV-----AEASDVVITMLPSS 72 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~-g~~~---~~~~~~~-----~~~adivi~~vp~~ 72 (316)
.++|.|+|+|.+|..+++.|.+.|++|++.|.++++++.+.+. +... -.+..+. ++++|.+|+ ++++
T Consensus 127 ~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~-t~~D 202 (565)
T 4gx0_A 127 RGHILIFGIDPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIA-NLSD 202 (565)
T ss_dssp CSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEE-CSCH
T ss_pred CCeEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEE-eCCc
Confidence 4689999999999999999999999999999999999988887 6432 1122222 357899887 5544
No 401
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=96.11 E-value=0.0041 Score=50.49 Aligned_cols=40 Identities=15% Similarity=0.115 Sum_probs=33.6
Q ss_pred CCCCCCeEEEEc-cchhhHHHHHHHHhCCC--eEEEEeCChhH
Q 021213 1 MLFFDQSVGFIG-LGNMGFRMASNLMKAGY--KMAVHDVNCNV 40 (316)
Q Consensus 1 ~~~~~~~IgiiG-~G~mG~~la~~l~~~g~--~V~~~~r~~~~ 40 (316)
|+.|.|+|.|.| .|.+|..+++.|.+.|+ +|++.+|++++
T Consensus 1 M~~~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~ 43 (215)
T 2a35_A 1 MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA 43 (215)
T ss_dssp ---CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC
T ss_pred CCCCCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc
Confidence 555678999998 79999999999999998 99999998764
No 402
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=96.11 E-value=0.0069 Score=53.17 Aligned_cols=59 Identities=14% Similarity=0.146 Sum_probs=44.4
Q ss_pred CCeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCC-------CcCCHHHHhhcCCEEEEeC
Q 021213 5 DQSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP-------TKETPFEVAEASDVVITML 69 (316)
Q Consensus 5 ~~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~-------~~~~~~~~~~~adivi~~v 69 (316)
.|+|.|.|+ |.+|..++..|++.||+|++.+|+++. .++. -..+..++++++|+||-+.
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 85 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDAIMGVSAVLHLG 85 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCCHHHHHHHHhCCCEEEECC
Confidence 478999987 999999999999999999999998754 1211 1123445677899998864
No 403
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=96.10 E-value=0.0063 Score=52.77 Aligned_cols=60 Identities=17% Similarity=0.108 Sum_probs=43.8
Q ss_pred CCCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhh--cCCEEEEeCC
Q 021213 4 FDQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITMLP 70 (316)
Q Consensus 4 ~~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~adivi~~vp 70 (316)
++|+|.|.| .|.+|..+++.|.+.||+|++.+|+.. ..+.-..+..++++ .+|+||-+..
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~-------~D~~d~~~~~~~~~~~~~d~vih~a~ 64 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE-------LNLLDSRAVHDFFASERIDQVYLAAA 64 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT-------CCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCcc-------CCccCHHHHHHHHHhcCCCEEEEcCe
Confidence 457999998 599999999999999999999887631 11111123445666 8999998653
No 404
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=96.09 E-value=0.0067 Score=53.08 Aligned_cols=64 Identities=17% Similarity=0.276 Sum_probs=46.9
Q ss_pred CeEEEEcc-chhhHHHHHHHHhC-CCeEEEEeCChhHHHHHHhC-CC-----CCcC---CHHHHhhcCCEEEEeC
Q 021213 6 QSVGFIGL-GNMGFRMASNLMKA-GYKMAVHDVNCNVMKMFSDM-GV-----PTKE---TPFEVAEASDVVITML 69 (316)
Q Consensus 6 ~~IgiiG~-G~mG~~la~~l~~~-g~~V~~~~r~~~~~~~l~~~-g~-----~~~~---~~~~~~~~adivi~~v 69 (316)
|+|.|.|+ |.+|..++..|++. |++|++.+|++++.+.+.+. ++ ...+ ...++++++|+||-+.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A 75 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLV 75 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECB
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcc
Confidence 58999987 99999999999998 89999999988765443221 21 2222 2345667899999863
No 405
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=96.09 E-value=0.022 Score=49.69 Aligned_cols=64 Identities=11% Similarity=0.142 Sum_probs=45.7
Q ss_pred CCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHH------HHHHh-CC-------CCCcCCHHHHhhcCCEEEEe
Q 021213 5 DQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVM------KMFSD-MG-------VPTKETPFEVAEASDVVITM 68 (316)
Q Consensus 5 ~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~------~~l~~-~g-------~~~~~~~~~~~~~adivi~~ 68 (316)
.|+|.|.| +|.+|+.++..|++.||+|.+..|+++.. ..+.. .+ +.-..+..++++++|+||-+
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~ 87 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHV 87 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence 46899998 79999999999999999999988876531 12211 12 11123456677889988875
No 406
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=96.07 E-value=0.005 Score=57.57 Aligned_cols=63 Identities=13% Similarity=0.098 Sum_probs=47.6
Q ss_pred CCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCC
Q 021213 5 DQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLP 70 (316)
Q Consensus 5 ~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp 70 (316)
+|+|.|.| +|.+|+.++..|.+.||+|++.+|++.+.+.+ .....+...++++++|+||-|..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v---~~d~~~~~~~~l~~~D~Vih~A~ 210 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKR---FWDPLNPASDLLDGADVLVHLAG 210 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCE---ECCTTSCCTTTTTTCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccce---eecccchhHHhcCCCCEEEECCC
Confidence 47999998 69999999999999999999999987653211 11222344566788999998653
No 407
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=96.06 E-value=0.069 Score=49.51 Aligned_cols=128 Identities=13% Similarity=0.155 Sum_probs=84.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHhhcc-CCccccccCCCCCCcccCCCCCCC--C
Q 021213 182 GNGAAAKICNNLTMAVSMLGVSEALTLGQS------LGISASTLTKILNSSS-ARCWSSDSYNPVPGVMEGVPASRN--Y 252 (316)
Q Consensus 182 g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~------~G~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~--~ 252 (316)
+..+.+|++.|.+.+..+.+++|++.+.++ .++|...+.++++.|. -.+|..+... ..+...+...+ +
T Consensus 322 ~~~~~~~~v~~al~~~~i~syaqGf~ll~~as~~~~w~l~~~~ia~iwr~GciIrs~~l~~i~---~a~~~~~~l~~l~~ 398 (497)
T 2p4q_A 322 DREQFVDDLEQALYASKIISYAQGFMLIREAAATYGWKLNNPAIALMWRGGCIIRSVFLGQIT---KAYREEPDLENLLF 398 (497)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHSSSTTCBHHHHHHH---HHHHHCTTCSCGGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCchHHHHHHHHH---HHHhcCCChhhhhc
Confidence 478999999999999999999999999876 7899999999999765 2344332000 00000000000 0
Q ss_pred CCCc--chhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhcCC
Q 021213 253 GGGF--ASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGGK 313 (316)
Q Consensus 253 ~~~~--~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~~ 313 (316)
.+-| .+.......+.++..|.+.|+|+|.+.+....|+.-...... ..+-+..+.|+++|
T Consensus 399 ~~~f~~~~~~~~~~~r~~v~~a~~~gvp~P~~s~aL~~~~~~~~~~~~-a~liqa~Rd~FG~H 460 (497)
T 2p4q_A 399 NKFFADAVTKAQSGWRKSIALATTYGIPTPAFSTALSFYDGYRSERLP-ANLLQAQRDYFGAH 460 (497)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTCSSCT-HHHHHHHHHHHSCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccCCch-hHHHHHHHHhcCCc
Confidence 1111 123334457889999999999999999999965554443333 34445556677666
No 408
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.03 E-value=0.017 Score=50.99 Aligned_cols=44 Identities=18% Similarity=0.201 Sum_probs=39.1
Q ss_pred CeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHHhCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMGV 49 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~~~g~ 49 (316)
.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+.+.|+
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga 213 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGA 213 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC
Confidence 579999999999999999988998 99999999998887777664
No 409
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=96.03 E-value=0.011 Score=50.44 Aligned_cols=46 Identities=13% Similarity=0.044 Sum_probs=35.1
Q ss_pred CCCCCCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh
Q 021213 1 MLFFDQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 46 (316)
Q Consensus 1 ~~~~~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~ 46 (316)
|.++.++|-|.| .|.+|.++++.|++.|++|++.+|++++.+.+.+
T Consensus 1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 47 (281)
T 3m1a_A 1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVA 47 (281)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 444445566665 5899999999999999999999999887766543
No 410
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=96.00 E-value=0.078 Score=48.89 Aligned_cols=128 Identities=10% Similarity=0.140 Sum_probs=84.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHhhcc-CCccccccCCCCCCcccCCCCCCC--C
Q 021213 182 GNGAAAKICNNLTMAVSMLGVSEALTLGQS------LGISASTLTKILNSSS-ARCWSSDSYNPVPGVMEGVPASRN--Y 252 (316)
Q Consensus 182 g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~------~G~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~--~ 252 (316)
+..+.+|++.|.+.+..+.+++|++.+.++ .++|...+.++++.|. -.+|..+.. .......+...+ +
T Consensus 317 ~~~~~~~~v~~al~~~~~~~yaqGf~ll~~a~~~~~~~l~~~~ia~~wr~Gciirs~~l~~i---~~a~~~~~~l~~l~~ 393 (474)
T 2iz1_A 317 DKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPYGTIAQIWRAGCIIRAEFLQNI---TDAFDKDSELENLLL 393 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSSSCTTCBTTHHHH---HHHHHHCTTCCCGGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccchHHHHHHHHH---HHHHhcCCChhhhhc
Confidence 789999999999999999999999999876 7899999999998765 233332200 000000000000 0
Q ss_pred CCCc--chhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhcCC
Q 021213 253 GGGF--ASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGGK 313 (316)
Q Consensus 253 ~~~~--~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~~ 313 (316)
.+-| .+.......+.++..|.+.|+|+|.+.+....|+.-...... ..+-+.-+.|+++|
T Consensus 394 ~~~~~~~~~~~~~~~r~~v~~a~~~~~p~p~~s~al~~~~~~~~~~~~-~~l~qa~rd~fg~h 455 (474)
T 2iz1_A 394 DDYFVDITKRYQEAVRDVVSLAVQAGTPIPTFTSAISYYDSYRSENLP-ANLIQAQRDYFGAH 455 (474)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTCSSCT-HHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccCCch-hhHHHHHHHhcCCc
Confidence 1111 122334557889999999999999999999965554443333 34445556666665
No 411
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.00 E-value=0.036 Score=48.87 Aligned_cols=45 Identities=16% Similarity=0.172 Sum_probs=39.9
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP 50 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~ 50 (316)
.+|.|+|+|.+|...++.+...|.+|++.++++++.+.+.+.|+.
T Consensus 170 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~ 214 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGAD 214 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCC
Confidence 579999999999999998888999999999999998888877753
No 412
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=95.97 E-value=0.0059 Score=56.12 Aligned_cols=73 Identities=19% Similarity=0.313 Sum_probs=56.8
Q ss_pred CCCCeEEEEccc----hhhHHHHHHHHhCC-CeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHH
Q 021213 3 FFDQSVGFIGLG----NMGFRMASNLMKAG-YKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVL 77 (316)
Q Consensus 3 ~~~~~IgiiG~G----~mG~~la~~l~~~g-~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~ 77 (316)
|..++|+|||++ .+|..+.++|.+.| +.|+.+++....+ .|.....|..++.+..|++++++|... +.
T Consensus 6 ~~p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~~~~i-----~G~~~y~sl~~lp~~~Dlavi~vp~~~--~~ 78 (457)
T 2csu_A 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV-----QGVKAYKSVKDIPDEIDLAIIVVPKRF--VK 78 (457)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE-----TTEECBSSTTSCSSCCSEEEECSCHHH--HH
T ss_pred cCCCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCCCCeE-----CCEeccCCHHHcCCCCCEEEEecCHHH--HH
Confidence 456789999998 88999999999985 7777777653322 477777888888888999999999765 46
Q ss_pred HHhcC
Q 021213 78 DVYNG 82 (316)
Q Consensus 78 ~v~~~ 82 (316)
+++.+
T Consensus 79 ~~v~e 83 (457)
T 2csu_A 79 DTLIQ 83 (457)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 413
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=95.97 E-value=0.062 Score=49.60 Aligned_cols=128 Identities=13% Similarity=0.143 Sum_probs=84.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHhhcc-CCccccccCCCCCCcccCCCCCCC--C
Q 021213 182 GNGAAAKICNNLTMAVSMLGVSEALTLGQS------LGISASTLTKILNSSS-ARCWSSDSYNPVPGVMEGVPASRN--Y 252 (316)
Q Consensus 182 g~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~------~G~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~--~ 252 (316)
+....+|++.|.+.+..+.+++|++.+.++ .++|...+.++++.|. -.||..+... ..+...+...+ +
T Consensus 325 ~~~~~~~~v~~al~~~~~~syaqGf~ll~~as~~~~w~l~~~~ia~iwr~GciIrs~~l~~i~---~a~~~~~~l~~l~~ 401 (480)
T 2zyd_A 325 DKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKIT---DACAENPQIANLLL 401 (480)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSSSSTTCBTHHHHHH---HHHHHCTTCSCGGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCcchHHHHHHHHH---HHHhcCCChHhhhc
Confidence 789999999999999999999999999876 7899999999998765 2344332000 00000000000 0
Q ss_pred CCCc--chhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhcCC
Q 021213 253 GGGF--ASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGGK 313 (316)
Q Consensus 253 ~~~~--~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~~ 313 (316)
.+-| .+.......+.++..|.+.|+|+|.+.+....|+.-....... .+-+..+.|+++|
T Consensus 402 ~~~f~~~~~~~~~~~r~~v~~a~~~gvp~p~~s~al~~~~~~~~~~~~~-~l~qa~Rd~FG~H 463 (480)
T 2zyd_A 402 APYFKQIADDYQQALRDVVAYAVQNGIPVPTFSAAVAYYDSYRAAVLPA-NLIQAQRDYFGAH 463 (480)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTCSSCTH-HHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccCCchh-hHHHHHHHhcCCC
Confidence 1111 1233344578899999999999999999999866655543333 4444555566665
No 414
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.96 E-value=0.036 Score=49.27 Aligned_cols=45 Identities=20% Similarity=0.348 Sum_probs=39.4
Q ss_pred CeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHHhCCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMGVP 50 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~~~g~~ 50 (316)
.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+.+.|+.
T Consensus 192 ~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~ 237 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 237 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc
Confidence 579999999999999998888897 899999999998888777754
No 415
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.96 E-value=0.015 Score=50.97 Aligned_cols=34 Identities=24% Similarity=0.417 Sum_probs=30.6
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNC 38 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~ 38 (316)
..||.|||+|..|+.++..|+..|. +++++|++.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 4689999999999999999999994 799998864
No 416
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=95.96 E-value=0.0056 Score=53.40 Aligned_cols=39 Identities=18% Similarity=0.101 Sum_probs=33.0
Q ss_pred CCCCCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChh
Q 021213 1 MLFFDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCN 39 (316)
Q Consensus 1 ~~~~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~ 39 (316)
||+++++|.|||.|.-|...|..|.+.|++|+++++++.
T Consensus 1 m~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 39 (335)
T 2zbw_A 1 MAADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPE 39 (335)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 554457899999999999999999999999999998643
No 417
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.94 E-value=0.025 Score=49.70 Aligned_cols=45 Identities=16% Similarity=0.365 Sum_probs=40.1
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGV 49 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~ 49 (316)
..+|.|+|+|.+|...++.+...|.+|++.++++++.+.+.+.|+
T Consensus 165 g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa 209 (339)
T 1rjw_A 165 GEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGA 209 (339)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCC
Confidence 368999999999999999999999999999999999888877664
No 418
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.91 E-value=0.007 Score=53.87 Aligned_cols=37 Identities=30% Similarity=0.369 Sum_probs=32.3
Q ss_pred CCCCCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCC
Q 021213 1 MLFFDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVN 37 (316)
Q Consensus 1 ~~~~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~ 37 (316)
||....+|.|||.|..|.+.|..|++.|++|+++++.
T Consensus 1 Mm~~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~ 37 (382)
T 1y56_B 1 MLPEKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKR 37 (382)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4433468999999999999999999999999999986
No 419
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=95.91 E-value=0.007 Score=52.77 Aligned_cols=34 Identities=26% Similarity=0.407 Sum_probs=31.6
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC 38 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~ 38 (316)
+++|.|||.|..|.++|..|++.|++|+++++++
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 4689999999999999999999999999999874
No 420
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=95.90 E-value=0.015 Score=50.94 Aligned_cols=34 Identities=29% Similarity=0.378 Sum_probs=30.5
Q ss_pred CCCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCC
Q 021213 4 FDQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVN 37 (316)
Q Consensus 4 ~~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~ 37 (316)
|.|+|.|.| .|.+|+.++..|++.||+|++.+|+
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 35 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNF 35 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecC
Confidence 357899997 5999999999999999999999875
No 421
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=95.89 E-value=0.0077 Score=52.08 Aligned_cols=36 Identities=22% Similarity=0.252 Sum_probs=32.5
Q ss_pred CCCeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChh
Q 021213 4 FDQSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCN 39 (316)
Q Consensus 4 ~~~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~ 39 (316)
++|+|.|.|+ |.+|+.++..|++.||+|++.+|++.
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 4689999988 99999999999999999999999765
No 422
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=95.89 E-value=0.023 Score=49.85 Aligned_cols=68 Identities=13% Similarity=0.221 Sum_probs=44.0
Q ss_pred CCeEEEEccchhhHHHHHHHHhCC---CeEEEE-eC-ChhHHHHHHhC----C-------------------CC--CcCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAG---YKMAVH-DV-NCNVMKMFSDM----G-------------------VP--TKET 54 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g---~~V~~~-~r-~~~~~~~l~~~----g-------------------~~--~~~~ 54 (316)
++||||+|+|++|..+.+.|.+++ .+|... ++ +++....+.+. | +. ...+
T Consensus 2 ~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (339)
T 3b1j_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred ceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEecCC
Confidence 369999999999999999998863 566544 44 44444443321 1 11 1234
Q ss_pred HHHHh---hcCCEEEEeCCCC
Q 021213 55 PFEVA---EASDVVITMLPSS 72 (316)
Q Consensus 55 ~~~~~---~~adivi~~vp~~ 72 (316)
++++. .++|+||.|+|..
T Consensus 82 p~~l~w~~~~vDvV~e~tg~~ 102 (339)
T 3b1j_A 82 PLNLPWKEWDIDLVIESTGVF 102 (339)
T ss_dssp GGGSCTTTTTCCEEEECSSSC
T ss_pred hHHCcccccCCCEEEECCCcc
Confidence 55542 2789999999864
No 423
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.88 E-value=0.032 Score=49.33 Aligned_cols=45 Identities=18% Similarity=0.275 Sum_probs=40.0
Q ss_pred CeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHHhCCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMGVP 50 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~~~g~~ 50 (316)
.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+++.|+.
T Consensus 173 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~ 218 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGAD 218 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC
Confidence 579999999999999988888898 899999999998888887764
No 424
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=95.87 E-value=0.027 Score=46.93 Aligned_cols=46 Identities=17% Similarity=0.257 Sum_probs=37.1
Q ss_pred CCCCCCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh
Q 021213 1 MLFFDQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 46 (316)
Q Consensus 1 ~~~~~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~ 46 (316)
|.+..+++-|.| .|.+|.++++.|++.|++|++.+|++++.+.+.+
T Consensus 1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 47 (245)
T 1uls_A 1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE 47 (245)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 444456677775 5899999999999999999999999887766543
No 425
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.87 E-value=0.012 Score=52.43 Aligned_cols=75 Identities=12% Similarity=0.184 Sum_probs=54.5
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcC---CHH---HHhhcCCEEEEeCCCChhhHHHH
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKE---TPF---EVAEASDVVITMLPSSSHQVLDV 79 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~---~~~---~~~~~adivi~~vp~~~~~~~~v 79 (316)
.+|.|+|+|.+|...++.+...|.+|++.++++++.+.+.+.|+...- +.+ ++....|+||-|+..... ++..
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~-~~~~ 274 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHN-LDDF 274 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCC-HHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHHH-HHHH
Confidence 579999999999999998888999999999999999888877754321 111 122357888888765433 4444
Q ss_pred hc
Q 021213 80 YN 81 (316)
Q Consensus 80 ~~ 81 (316)
+.
T Consensus 275 ~~ 276 (369)
T 1uuf_A 275 TT 276 (369)
T ss_dssp HT
T ss_pred HH
Confidence 43
No 426
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=95.87 E-value=0.0045 Score=54.10 Aligned_cols=37 Identities=16% Similarity=0.159 Sum_probs=32.7
Q ss_pred CCCCeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChh
Q 021213 3 FFDQSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCN 39 (316)
Q Consensus 3 ~~~~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~ 39 (316)
+..|+|.|.|+ |.+|..+++.|++.|++|++.+|++.
T Consensus 18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (330)
T 2pzm_A 18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFAT 55 (330)
T ss_dssp TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 44589999987 99999999999999999999999654
No 427
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.86 E-value=0.004 Score=52.98 Aligned_cols=34 Identities=26% Similarity=0.458 Sum_probs=31.6
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC 38 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~ 38 (316)
.++|.|||.|.+|..-+..|.+.|++|++++++.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4889999999999999999999999999998754
No 428
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=95.84 E-value=0.0092 Score=52.17 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=32.7
Q ss_pred CCCeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhH
Q 021213 4 FDQSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNV 40 (316)
Q Consensus 4 ~~~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~ 40 (316)
..|+|.|.|+ |.+|..+++.|++.||+|++.+|+++.
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 39 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGE 39 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCST
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence 3478999987 999999999999999999999998754
No 429
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=95.83 E-value=0.021 Score=47.66 Aligned_cols=40 Identities=20% Similarity=0.311 Sum_probs=33.5
Q ss_pred CCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHH
Q 021213 5 DQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMF 44 (316)
Q Consensus 5 ~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l 44 (316)
.++|-|.| .|.+|..+++.|++.|++|++.+|++++.+.+
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~ 51 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHV 51 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 35677775 58999999999999999999999998776544
No 430
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=95.82 E-value=0.02 Score=48.70 Aligned_cols=41 Identities=17% Similarity=0.297 Sum_probs=33.7
Q ss_pred CeEEEE--ccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh
Q 021213 6 QSVGFI--GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 46 (316)
Q Consensus 6 ~~Igii--G~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~ 46 (316)
.|+.+| |.|.+|.++++.|++.|++|++.+|+.++.+.+.+
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~ 70 (272)
T 4dyv_A 28 KKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAA 70 (272)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 455555 56899999999999999999999999887765543
No 431
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=95.82 E-value=0.0027 Score=56.54 Aligned_cols=90 Identities=19% Similarity=0.258 Sum_probs=51.1
Q ss_pred CeEEEEc-cchhhHHHHH-HHHhCCC---eEEEEeCC-hhH-HHHHHhCCCCCc--CCHHHHhhcCCEEEEeCCCChhhH
Q 021213 6 QSVGFIG-LGNMGFRMAS-NLMKAGY---KMAVHDVN-CNV-MKMFSDMGVPTK--ETPFEVAEASDVVITMLPSSSHQV 76 (316)
Q Consensus 6 ~~IgiiG-~G~mG~~la~-~l~~~g~---~V~~~~r~-~~~-~~~l~~~g~~~~--~~~~~~~~~adivi~~vp~~~~~~ 76 (316)
+||+|+| .|++|..+.+ .|.++++ ++.....+ ..+ +..+....+... .++++ ++++|+||.|+|....
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~~v~~~~g~~i~~~~~~~~~~-~~~~DvVf~a~g~~~s-- 78 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEA-LKALDIIVTCQGGDYT-- 78 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHH-HHTCSEEEECSCHHHH--
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCCCccccCCCceEEEecCChHH-hcCCCEEEECCCchhH--
Confidence 5999999 9999999999 5655554 34444332 111 111111222222 23444 5789999999996543
Q ss_pred HHHhcCCCCcccCCCCCCCeEEEEcCCC
Q 021213 77 LDVYNGPNGLLQGGNSVRPQLLIDSSTI 104 (316)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~vi~~st~ 104 (316)
++.... +++.. ...+|||.|+.
T Consensus 79 ~~~a~~---~~~~G---~k~vVID~ss~ 100 (367)
T 1t4b_A 79 NEIYPK---LRESG---WQGYWIDAASS 100 (367)
T ss_dssp HHHHHH---HHHTT---CCCEEEECSST
T ss_pred HHHHHH---HHHCC---CCEEEEcCChh
Confidence 444332 22210 11388888764
No 432
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=95.81 E-value=0.027 Score=47.38 Aligned_cols=40 Identities=13% Similarity=0.241 Sum_probs=33.2
Q ss_pred CCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHH
Q 021213 5 DQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMF 44 (316)
Q Consensus 5 ~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l 44 (316)
.+++-|.| .|.+|.++++.|++.|++|++.+|++++.+.+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 47 (263)
T 3ai3_A 7 GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEA 47 (263)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 35566665 58999999999999999999999998776544
No 433
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=95.77 E-value=0.0076 Score=53.53 Aligned_cols=52 Identities=12% Similarity=0.151 Sum_probs=41.3
Q ss_pred CeEEEEc-cchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeC
Q 021213 6 QSVGFIG-LGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITML 69 (316)
Q Consensus 6 ~~IgiiG-~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~v 69 (316)
|||.|.| .|.+|..++..|.+.|+ +|+..||+.+ ..+..++++++|+||-+.
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~~d------------~~~l~~~~~~~d~Vih~a 54 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTK------------EEELESALLKADFIVHLA 54 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTTCC------------HHHHHHHHHHCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCCCC------------HHHHHHHhccCCEEEECC
Confidence 6899998 79999999999999999 9999999411 122345566799999865
No 434
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=95.77 E-value=0.026 Score=47.46 Aligned_cols=40 Identities=18% Similarity=0.306 Sum_probs=33.6
Q ss_pred CeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHHH
Q 021213 6 QSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 45 (316)
Q Consensus 6 ~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~ 45 (316)
+++-|.| .|.+|.++++.|++.|++|.+.+|+.++.+.+.
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 49 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAA 49 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4566665 689999999999999999999999988776554
No 435
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=95.73 E-value=0.0072 Score=52.18 Aligned_cols=36 Identities=22% Similarity=0.323 Sum_probs=32.4
Q ss_pred CeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhHH
Q 021213 6 QSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVM 41 (316)
Q Consensus 6 ~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~~ 41 (316)
|||.|.|+ |.+|+.++..|++.||+|++.+|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 37 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGR 37 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCc
Confidence 68999987 9999999999999999999999976643
No 436
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=95.72 E-value=0.015 Score=53.86 Aligned_cols=62 Identities=24% Similarity=0.502 Sum_probs=47.8
Q ss_pred CeEEEEccchhhHH-HHHHHHhCCCeEEEEeCChhH-HHHHHhCCCCCc--CCHHHHhhcCCEEEEe
Q 021213 6 QSVGFIGLGNMGFR-MASNLMKAGYKMAVHDVNCNV-MKMFSDMGVPTK--ETPFEVAEASDVVITM 68 (316)
Q Consensus 6 ~~IgiiG~G~mG~~-la~~l~~~g~~V~~~~r~~~~-~~~l~~~g~~~~--~~~~~~~~~adivi~~ 68 (316)
++|.|||+|..|.+ +|+.|.+.|++|+++|..... .+.+.+.|+... .+. +.++.+|+||+.
T Consensus 20 ~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~-~~~~~a~~vv~s 85 (491)
T 2f00_A 20 RHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQLMNLGATIYFNHRP-ENVRDASVVVVS 85 (491)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCG-GGGTTCSEEEEC
T ss_pred CEEEEEEcCHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHCCCEEECCCCH-HHcCCCCEEEEC
Confidence 57999999999997 999999999999999976543 456777776543 233 335689998884
No 437
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=95.71 E-value=0.019 Score=51.00 Aligned_cols=46 Identities=20% Similarity=0.315 Sum_probs=39.7
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHH-hCCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS-DMGVP 50 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~-~~g~~ 50 (316)
..+|.|+|+|.+|...++.+...|.+|++.++++++.+.+. +.|..
T Consensus 188 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~ 234 (366)
T 1yqd_A 188 GKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGAD 234 (366)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCc
Confidence 36899999999999999999999999999999999887766 56643
No 438
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=95.71 E-value=0.011 Score=54.15 Aligned_cols=35 Identities=9% Similarity=0.217 Sum_probs=29.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhCC-C---eEEEEeCChh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAG-Y---KMAVHDVNCN 39 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g-~---~V~~~~r~~~ 39 (316)
++||.|||+|.||+.++..++++. + +|++.|++..
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~ 51 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGT 51 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchh
Confidence 478999999999999999999865 4 6888887654
No 439
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.71 E-value=0.039 Score=48.36 Aligned_cols=44 Identities=20% Similarity=0.349 Sum_probs=39.8
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGV 49 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~ 49 (316)
.+|.|+|+|.+|...++.+...|.+|++.++++++.+.+++.|.
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa 211 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGA 211 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCC
Confidence 57999999999999999998999999999999999988887764
No 440
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=95.71 E-value=0.031 Score=46.58 Aligned_cols=42 Identities=19% Similarity=0.312 Sum_probs=35.2
Q ss_pred CCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh
Q 021213 5 DQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 46 (316)
Q Consensus 5 ~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~ 46 (316)
.+++-|.| .|.+|.++++.|++.|++|.+.+|++++.+.+.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 44 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK 44 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45666665 5789999999999999999999999888776654
No 441
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.70 E-value=0.016 Score=54.56 Aligned_cols=34 Identities=24% Similarity=0.417 Sum_probs=30.7
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNC 38 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~ 38 (316)
..+|.|||+|..|+.++..|+..|. +++++|.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 4689999999999999999999994 799999864
No 442
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=95.70 E-value=0.0069 Score=54.67 Aligned_cols=38 Identities=29% Similarity=0.281 Sum_probs=32.1
Q ss_pred CCCCCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCCh
Q 021213 1 MLFFDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC 38 (316)
Q Consensus 1 ~~~~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~ 38 (316)
|.++..+|.|||.|..|...|..|++.|++|+++++++
T Consensus 1 M~~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 1 MQREKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCCccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 33444689999999999999999999999999999864
No 443
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=95.69 E-value=0.02 Score=51.14 Aligned_cols=81 Identities=23% Similarity=0.301 Sum_probs=56.4
Q ss_pred CCeEEEEcc-chhhHHHHHHHHhCCC---eEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChh----hH
Q 021213 5 DQSVGFIGL-GNMGFRMASNLMKAGY---KMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSH----QV 76 (316)
Q Consensus 5 ~~~IgiiG~-G~mG~~la~~l~~~g~---~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~----~~ 76 (316)
..||.|||. |..|..-++.+...|. +|++||+++.. .|... +.+.++|+||-|+.-... -.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~------~g~~~-----~~i~~aDivIn~vlig~~aP~Lvt 282 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETS------RGGPF-----DEIPQADIFINCIYLSKPIAPFTN 282 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHT------TCSCC-----THHHHSSEEEECCCCCSSCCCSCC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccc------cCCch-----hhHhhCCEEEECcCcCCCCCcccC
Confidence 358999999 9999999999999998 89999987622 13322 345689999999864211 02
Q ss_pred HHHhcCCCCcccCCCCCCCeEEEEcCCC
Q 021213 77 LDVYNGPNGLLQGGNSVRPQLLIDSSTI 104 (316)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~~~~vi~~st~ 104 (316)
++.++.. ..++.+|||.+.-
T Consensus 283 ~e~v~~m--------~k~gsVIVDVA~D 302 (394)
T 2qrj_A 283 MEKLNNP--------NRRLRTVVDVSAD 302 (394)
T ss_dssp HHHHCCT--------TCCCCEEEETTCC
T ss_pred HHHHhcC--------cCCCeEEEEEecC
Confidence 3333221 1467799999854
No 444
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=95.69 E-value=0.012 Score=52.05 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=31.1
Q ss_pred CCeEEEEc-cchhhHHHHHHHHh--CCCeEEEEeCChh
Q 021213 5 DQSVGFIG-LGNMGFRMASNLMK--AGYKMAVHDVNCN 39 (316)
Q Consensus 5 ~~~IgiiG-~G~mG~~la~~l~~--~g~~V~~~~r~~~ 39 (316)
+|+|.|.| .|.+|+.++..|++ .|++|++.+|++.
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~ 47 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS 47 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence 47899995 69999999999999 9999999998654
No 445
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=95.68 E-value=0.0084 Score=52.88 Aligned_cols=67 Identities=15% Similarity=0.159 Sum_probs=46.0
Q ss_pred CCCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh-----CCC-----CCc--CCHHHHhhc--CCEEEEe
Q 021213 4 FDQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-----MGV-----PTK--ETPFEVAEA--SDVVITM 68 (316)
Q Consensus 4 ~~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~-----~g~-----~~~--~~~~~~~~~--adivi~~ 68 (316)
..|+|.|.| .|.+|+.++..|.+.||+|++.+|++++...+.+ .++ ... .+..++++. +|+||-+
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 87 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 87 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEEC
Confidence 347899998 6999999999999999999999998754322221 121 111 123344554 7999887
Q ss_pred CC
Q 021213 69 LP 70 (316)
Q Consensus 69 vp 70 (316)
..
T Consensus 88 A~ 89 (357)
T 1rkx_A 88 AA 89 (357)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 446
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.66 E-value=0.023 Score=49.99 Aligned_cols=46 Identities=11% Similarity=0.093 Sum_probs=39.7
Q ss_pred CCeEEEEccchhhHHHHHHHHhC--CCeEEEEeCChhHHHHHHhCCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKA--GYKMAVHDVNCNVMKMFSDMGVP 50 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~--g~~V~~~~r~~~~~~~l~~~g~~ 50 (316)
..+|.|+|+|.+|...++.+... |.+|++.++++++.+.+++.|..
T Consensus 171 g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~ 218 (344)
T 2h6e_A 171 EPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGAD 218 (344)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCC
Confidence 35899999999999999888878 99999999999998888776654
No 447
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=95.66 E-value=0.01 Score=54.10 Aligned_cols=35 Identities=17% Similarity=0.352 Sum_probs=31.1
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCCh
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC 38 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~ 38 (316)
|+++|.|||.|..|..+|..|++.|++|+++++.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 34689999999999999999999999999999765
No 448
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=95.66 E-value=0.011 Score=52.91 Aligned_cols=36 Identities=17% Similarity=0.262 Sum_probs=32.5
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChh
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCN 39 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~ 39 (316)
++++|.|||.|..|...|..|.+.|++|++++++..
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~ 37 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDH 37 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCC
Confidence 357999999999999999999999999999998643
No 449
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.66 E-value=0.037 Score=49.05 Aligned_cols=44 Identities=14% Similarity=0.117 Sum_probs=39.2
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGV 49 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~ 49 (316)
.+|.|+|+|.+|...++.+...|.+|++.++++++.+.+.+.|+
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa 234 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGA 234 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCC
Confidence 58999999999999999999999999999999998887776654
No 450
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=95.65 E-value=0.033 Score=49.25 Aligned_cols=34 Identities=21% Similarity=0.382 Sum_probs=30.8
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNC 38 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~ 38 (316)
..+|.|||+|..|+.++..|+.+|. +++++|++.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 4689999999999999999999995 799999874
No 451
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=95.65 E-value=0.049 Score=50.33 Aligned_cols=127 Identities=11% Similarity=0.161 Sum_probs=82.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHhhcc-CCccccccCCCCCCcccCCCCCCC--CC
Q 021213 183 NGAAAKICNNLTMAVSMLGVSEALTLGQSL------GISASTLTKILNSSS-ARCWSSDSYNPVPGVMEGVPASRN--YG 253 (316)
Q Consensus 183 ~a~~~k~~~n~~~~~~~~~~~Ea~~l~~~~------G~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~--~~ 253 (316)
..+.+|++.|.+.+..+.+++|++.+.++. ++|...+.++++.|. -.++..+.. .......+.-.+ +.
T Consensus 315 ~~~~~~~v~~al~~~~~~syaqGf~ll~~as~~~~w~l~~~~ia~~wr~Gciirs~~l~~i---~~a~~~~~~l~~l~~~ 391 (482)
T 2pgd_A 315 KKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKI---KDAFDRNPGLQNLLLD 391 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTTSSSTTCBTHHHHH---HHHHHHCTTCSCGGGS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCcchHHHHHHHH---HHHHhcCCChhhhhcC
Confidence 389999999999999999999999998763 799999999998765 233332200 000000000001 11
Q ss_pred CCc--chhhHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhcCC
Q 021213 254 GGF--ASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGGK 313 (316)
Q Consensus 254 ~~~--~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~~ 313 (316)
+.| .+.......+.++..|.+.|+|+|.+.+....|+. .....-...+-+.-+.|+++|
T Consensus 392 ~~~~~~~~~~~~~~r~~v~~a~~~g~p~p~~s~al~~~~~-~~~~~~~~~l~qa~rd~fG~h 452 (482)
T 2pgd_A 392 DFFKSAVENCQDSWRRAISTGVQAGIPMPCFTTALSFYDG-YRHAMLPANLIQAQRDYFGAH 452 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHH-HHCSSCTHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh-cccCCcchhHHHHHHhhcCCc
Confidence 111 22333455788999999999999999999985544 444444444555556666665
No 452
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=95.62 E-value=0.0063 Score=53.44 Aligned_cols=36 Identities=17% Similarity=0.189 Sum_probs=29.6
Q ss_pred CCCCeEEEEcc-chhhHHHHHHHHhCC--CeEEEEeCCh
Q 021213 3 FFDQSVGFIGL-GNMGFRMASNLMKAG--YKMAVHDVNC 38 (316)
Q Consensus 3 ~~~~~IgiiG~-G~mG~~la~~l~~~g--~~V~~~~r~~ 38 (316)
+.+|+|.|.|+ |.+|..++..|++.| ++|++.+|+.
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~ 60 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALT 60 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCC
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccc
Confidence 33478999987 999999999999999 6787887754
No 453
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=95.61 E-value=0.026 Score=49.26 Aligned_cols=65 Identities=17% Similarity=0.254 Sum_probs=44.0
Q ss_pred CeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCCh--h---HHHHHHhCC-CC-----Cc--CCHHHHhhc--CCEEEEeC
Q 021213 6 QSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNC--N---VMKMFSDMG-VP-----TK--ETPFEVAEA--SDVVITML 69 (316)
Q Consensus 6 ~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~--~---~~~~l~~~g-~~-----~~--~~~~~~~~~--adivi~~v 69 (316)
|+|.|.| .|.+|+.+++.|++.|++|++.+|+. . ..+.+.+.+ +. .. .+..+++++ +|+||-+.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 81 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA 81 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEECC
Confidence 5899998 69999999999999999999998742 1 123333222 21 11 123445666 89888865
Q ss_pred C
Q 021213 70 P 70 (316)
Q Consensus 70 p 70 (316)
.
T Consensus 82 ~ 82 (347)
T 1orr_A 82 G 82 (347)
T ss_dssp C
T ss_pred c
Confidence 3
No 454
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=95.61 E-value=0.015 Score=53.68 Aligned_cols=62 Identities=27% Similarity=0.510 Sum_probs=47.9
Q ss_pred CeEEEEccchhhHH-HHHHHHhCCCeEEEEeCChhH-HHHHHhCCCCCc--CCHHHHhhcCCEEEEe
Q 021213 6 QSVGFIGLGNMGFR-MASNLMKAGYKMAVHDVNCNV-MKMFSDMGVPTK--ETPFEVAEASDVVITM 68 (316)
Q Consensus 6 ~~IgiiG~G~mG~~-la~~l~~~g~~V~~~~r~~~~-~~~l~~~g~~~~--~~~~~~~~~adivi~~ 68 (316)
++|.|||+|..|.+ +|+.|.+.|++|+++|..... .+.+.+.|+... .+. +.++.+|+||+.
T Consensus 19 ~~i~viG~G~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~-~~~~~a~~vv~s 84 (475)
T 1p3d_A 19 QQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAE-EHIEGASVVVVS 84 (475)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCG-GGGTTCSEEEEC
T ss_pred CEEEEEeecHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHhCCCEEECCCCH-HHcCCCCEEEEC
Confidence 57999999999996 999999999999999986543 456777776543 233 345689988884
No 455
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=95.61 E-value=0.013 Score=52.67 Aligned_cols=35 Identities=31% Similarity=0.529 Sum_probs=32.1
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCN 39 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~ 39 (316)
.++|.|||.|..|.++|..|++.|++|+++++++.
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 46899999999999999999999999999998753
No 456
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=95.61 E-value=0.068 Score=43.87 Aligned_cols=40 Identities=10% Similarity=0.118 Sum_probs=34.0
Q ss_pred eEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh
Q 021213 7 SVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 46 (316)
Q Consensus 7 ~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~ 46 (316)
+|-|.| .|.+|.++++.|++.|++|++.+|++++.+.+.+
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 43 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTN 43 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 466665 5789999999999999999999999988877654
No 457
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=95.61 E-value=0.024 Score=50.41 Aligned_cols=68 Identities=13% Similarity=0.221 Sum_probs=43.7
Q ss_pred CCeEEEEccchhhHHHHHHHHhCC---CeEEEE-eC-ChhHHHHHHhC----C-------------------CC--CcCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAG---YKMAVH-DV-NCNVMKMFSDM----G-------------------VP--TKET 54 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g---~~V~~~-~r-~~~~~~~l~~~----g-------------------~~--~~~~ 54 (316)
++||||+|+|++|..+.+.|.+++ .+|... ++ +++....+.+. | +. ...+
T Consensus 2 ~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (380)
T 2d2i_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (380)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred CcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeEEEEEecCC
Confidence 369999999999999999998763 565544 43 44444333321 1 11 1234
Q ss_pred HHHHh---hcCCEEEEeCCCC
Q 021213 55 PFEVA---EASDVVITMLPSS 72 (316)
Q Consensus 55 ~~~~~---~~adivi~~vp~~ 72 (316)
++++. .++|+||.|+|..
T Consensus 82 p~~l~w~~~gvDvV~e~TG~f 102 (380)
T 2d2i_A 82 PLNLPWKEWDIDLVIESTGVF 102 (380)
T ss_dssp GGGCCHHHHTCCEEEECSSSC
T ss_pred hHHCCcccCCCCEEEECCCcc
Confidence 55542 2799999999864
No 458
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=95.60 E-value=0.021 Score=51.88 Aligned_cols=65 Identities=22% Similarity=0.244 Sum_probs=44.9
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHH-HHhCCC-CCcCCH---HHHhhcCCEEEEe
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKM-FSDMGV-PTKETP---FEVAEASDVVITM 68 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~-l~~~g~-~~~~~~---~~~~~~adivi~~ 68 (316)
..+||+|+|.|..|..++..+.+.|++|.++|+++..-.. +.+.-+ ....+. .++++.+|+|+.-
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~~~ 103 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEAVSTE 103 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCEEEEc
Confidence 3468999999999999999999999999999987653322 222111 112233 3445678988853
No 459
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=95.59 E-value=0.0013 Score=55.75 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=31.6
Q ss_pred CCeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChh
Q 021213 5 DQSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCN 39 (316)
Q Consensus 5 ~~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~ 39 (316)
+++|.|.|+ |.+|+.+++.|++.|++|++.+|+++
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDL 37 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCC
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 358999987 99999999999999999999999865
No 460
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=95.59 E-value=0.0099 Score=53.97 Aligned_cols=39 Identities=28% Similarity=0.238 Sum_probs=32.5
Q ss_pred CCCCCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhH
Q 021213 2 LFFDQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNV 40 (316)
Q Consensus 2 ~~~~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~ 40 (316)
++...+|.|||.|..|...|..|++.|++|+++++++..
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~ 62 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAP 62 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 333468999999999999999999999999999997653
No 461
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.58 E-value=0.045 Score=48.17 Aligned_cols=44 Identities=20% Similarity=0.281 Sum_probs=39.1
Q ss_pred CeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCC
Q 021213 6 QSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGV 49 (316)
Q Consensus 6 ~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~ 49 (316)
.+|.|+|+ |.+|..+++.+...|.+|++.++++++.+.+.+.|.
T Consensus 171 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~ 215 (347)
T 2hcy_A 171 HWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGG 215 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCC
Confidence 57999999 899999999999999999999999988877776664
No 462
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=95.57 E-value=0.043 Score=45.93 Aligned_cols=43 Identities=19% Similarity=0.142 Sum_probs=35.6
Q ss_pred CCCeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh
Q 021213 4 FDQSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 46 (316)
Q Consensus 4 ~~~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~ 46 (316)
..+++-|.|. |.+|.++++.|++.|++|++.+|++++.+.+.+
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 47 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAR 47 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 3456777765 899999999999999999999999887766543
No 463
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=95.56 E-value=0.0048 Score=52.26 Aligned_cols=35 Identities=17% Similarity=0.179 Sum_probs=30.9
Q ss_pred CeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhH
Q 021213 6 QSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNV 40 (316)
Q Consensus 6 ~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~ 40 (316)
++|-|.| .|.+|..+++.|++.|++|++.+|++.+
T Consensus 4 k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~ 39 (267)
T 3rft_A 4 KRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLD 39 (267)
T ss_dssp EEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcc
Confidence 4677787 7999999999999999999999998754
No 464
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=95.54 E-value=0.011 Score=55.33 Aligned_cols=41 Identities=20% Similarity=0.288 Sum_probs=35.7
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 46 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~ 46 (316)
+++.|+|+|.+|.+++..|++.|.+|++++|+.++.+.+.+
T Consensus 365 k~vlV~GaGGig~aia~~L~~~G~~V~i~~R~~~~a~~la~ 405 (523)
T 2o7s_A 365 KTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAE 405 (523)
T ss_dssp -CEEEECCSHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 57889999999999999999999999999999988877754
No 465
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=95.53 E-value=0.03 Score=46.43 Aligned_cols=41 Identities=12% Similarity=0.121 Sum_probs=34.9
Q ss_pred CeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh
Q 021213 6 QSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 46 (316)
Q Consensus 6 ~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~ 46 (316)
++|-|.|. |.+|..+++.|++.|++|++.+|++++.+.+.+
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVR 49 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 56777776 899999999999999999999999887765543
No 466
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=95.52 E-value=0.012 Score=51.59 Aligned_cols=33 Identities=15% Similarity=0.214 Sum_probs=30.0
Q ss_pred CeEEEEc-cchhhHHHHHHHHhC--CCeEEEEeCCh
Q 021213 6 QSVGFIG-LGNMGFRMASNLMKA--GYKMAVHDVNC 38 (316)
Q Consensus 6 ~~IgiiG-~G~mG~~la~~l~~~--g~~V~~~~r~~ 38 (316)
|+|.|.| .|.+|+.++..|++. |++|++.+|++
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 40 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLT 40 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 6899998 699999999999998 89999999864
No 467
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=95.52 E-value=0.059 Score=46.07 Aligned_cols=75 Identities=12% Similarity=0.228 Sum_probs=56.3
Q ss_pred CCeEEEEccch-hhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHHhcCC
Q 021213 5 DQSVGFIGLGN-MGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDVYNGP 83 (316)
Q Consensus 5 ~~~IgiiG~G~-mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v~~~~ 83 (316)
.+++.|||-++ +|.+++..|.+.+..|+++.... .++.+..++||+||.++..+.- +.
T Consensus 179 Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T--------------~dl~~~~~~ADIvV~A~G~p~~-----i~-- 237 (303)
T 4b4u_A 179 GKHAVVVGRSAILGKPMAMMLLQANATVTICHSRT--------------QNLPELVKQADIIVGAVGKAEL-----IQ-- 237 (303)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SSHHHHHHTCSEEEECSCSTTC-----BC--
T ss_pred CCEEEEEeccccccchHHHHHHhcCCEEEEecCCC--------------CCHHHHhhcCCeEEeccCCCCc-----cc--
Confidence 36899999654 69999999999999999987542 4677788999999999875431 11
Q ss_pred CCcccCCCCCCCeEEEEcCCCC
Q 021213 84 NGLLQGGNSVRPQLLIDSSTID 105 (316)
Q Consensus 84 ~~~~~~~~~~~~~~vi~~st~~ 105 (316)
..++ .++.++||.+.+.
T Consensus 238 ~d~v-----k~GavVIDVGin~ 254 (303)
T 4b4u_A 238 KDWI-----KQGAVVVDAGFHP 254 (303)
T ss_dssp GGGS-----CTTCEEEECCCBC
T ss_pred cccc-----cCCCEEEEeceec
Confidence 1233 3678999998753
No 468
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.51 E-value=0.045 Score=48.70 Aligned_cols=44 Identities=16% Similarity=0.279 Sum_probs=38.5
Q ss_pred CeEEEEccchhhHHHHHHHHhCCC-eEEEEeCChhHHHHHHhCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMGV 49 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~~~~~~~l~~~g~ 49 (316)
.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+++.|+
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa 228 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGA 228 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC
Confidence 579999999999999998888998 89999999998887776664
No 469
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=95.51 E-value=0.022 Score=46.95 Aligned_cols=46 Identities=15% Similarity=0.166 Sum_probs=35.8
Q ss_pred CCCCCCeEEEE-ccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh
Q 021213 1 MLFFDQSVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 46 (316)
Q Consensus 1 ~~~~~~~Igii-G~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~ 46 (316)
|..|.++|-|. |.|.+|..+++.|++.|++|++.+|++++.+.+.+
T Consensus 1 M~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 47 (234)
T 2ehd_A 1 MEGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAA 47 (234)
T ss_dssp ---CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 44555667777 57899999999999999999999999887765543
No 470
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=95.50 E-value=0.14 Score=46.08 Aligned_cols=103 Identities=17% Similarity=0.175 Sum_probs=64.2
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEE-EEeC----------ChhHHHHHHhC-C-CCC-cCCHHHHh-hcCCEEEEe
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMA-VHDV----------NCNVMKMFSDM-G-VPT-KETPFEVA-EASDVVITM 68 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~-~~~r----------~~~~~~~l~~~-g-~~~-~~~~~~~~-~~adivi~~ 68 (316)
..++|.|.|.|++|...++.|.+.|..|+ +.|+ +.+.+..+.+. | +.. ..+..+++ -+||+.+-|
T Consensus 217 ~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~~~~e~~~~~~DVliP~ 296 (419)
T 3aoe_E 217 RGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDLAPEEVFGLEAEVLVLA 296 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCBCTTTGGGSSCSEEEEC
T ss_pred cCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeeccchhhhccCceEEEec
Confidence 35789999999999999999999999887 7777 66666666553 2 110 11223433 379999998
Q ss_pred CCCChhhHHHHhcCCCCcccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhc
Q 021213 69 LPSSSHQVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNC 119 (316)
Q Consensus 69 vp~~~~~~~~v~~~~~~~~~~~~~~~~~~vi~~st~~~~~~~~l~~~~~~~ 119 (316)
-..... ..+....+ +-++|+...+... + .+-.+.+.+.
T Consensus 297 A~~n~i-~~~~A~~l----------~ak~V~EgAN~p~-t-~~A~~~L~~~ 334 (419)
T 3aoe_E 297 AREGAL-DGDRARQV----------QAQAVVEVANFGL-N-PEAEAYLLGK 334 (419)
T ss_dssp SCTTCB-CHHHHTTC----------CCSEEEECSTTCB-C-HHHHHHHHHH
T ss_pred cccccc-ccchHhhC----------CceEEEECCCCcC-C-HHHHHHHHHC
Confidence 654432 22333222 2247777776542 2 3334455543
No 471
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.47 E-value=0.13 Score=46.61 Aligned_cols=69 Identities=13% Similarity=0.078 Sum_probs=48.8
Q ss_pred CCCeEEEEccchhhHHHHHHHHhCCCeEE-EEeC----------ChhHHHHHHhCCCC-------CcCCHHHHh-hcCCE
Q 021213 4 FDQSVGFIGLGNMGFRMASNLMKAGYKMA-VHDV----------NCNVMKMFSDMGVP-------TKETPFEVA-EASDV 64 (316)
Q Consensus 4 ~~~~IgiiG~G~mG~~la~~l~~~g~~V~-~~~r----------~~~~~~~l~~~g~~-------~~~~~~~~~-~~adi 64 (316)
..++|.|.|.|++|...++.|.+.|..|+ +.|+ +.+.+..+.+.... ...+.++++ .+||+
T Consensus 234 ~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~~~~DI 313 (440)
T 3aog_A 234 EGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWGLPVEF 313 (440)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTTCCCSE
T ss_pred cCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhcCCCcE
Confidence 35789999999999999999999999877 5566 55666555543211 112445554 37999
Q ss_pred EEEeCCCC
Q 021213 65 VITMLPSS 72 (316)
Q Consensus 65 vi~~vp~~ 72 (316)
++-|....
T Consensus 314 lvPcA~~n 321 (440)
T 3aog_A 314 LVPAALEK 321 (440)
T ss_dssp EEECSSSS
T ss_pred EEecCCcC
Confidence 99986543
No 472
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=95.45 E-value=0.013 Score=51.05 Aligned_cols=35 Identities=11% Similarity=0.190 Sum_probs=30.2
Q ss_pred CCCeEEEEc-cchhhHHHHHHHHhCC--CeEEEEeCCh
Q 021213 4 FDQSVGFIG-LGNMGFRMASNLMKAG--YKMAVHDVNC 38 (316)
Q Consensus 4 ~~~~IgiiG-~G~mG~~la~~l~~~g--~~V~~~~r~~ 38 (316)
..|||.|.| .|.+|..++..|++.| ++|++.+|++
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~ 39 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLG 39 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 347899998 5999999999999986 8999999864
No 473
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=95.44 E-value=0.041 Score=48.32 Aligned_cols=69 Identities=13% Similarity=0.191 Sum_probs=44.1
Q ss_pred CCeEEEEccchhhHHHHHHHHh---C-CCeEEEE-eC-ChhHHHHHHhC---------------------C--CCC--cC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMK---A-GYKMAVH-DV-NCNVMKMFSDM---------------------G--VPT--KE 53 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~---~-g~~V~~~-~r-~~~~~~~l~~~---------------------g--~~~--~~ 53 (316)
++||||+|.|++|..+.+.|.+ + ..+|... ++ +++....+.+. | +.. ..
T Consensus 2 ~ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~ 81 (339)
T 2x5j_O 2 TVRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHER 81 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEEecC
Confidence 3699999999999999999987 4 4566544 43 44444444321 1 111 12
Q ss_pred CHHHH-hh--cCCEEEEeCCCCh
Q 021213 54 TPFEV-AE--ASDVVITMLPSSS 73 (316)
Q Consensus 54 ~~~~~-~~--~adivi~~vp~~~ 73 (316)
+++++ .+ ++|+||.|+|...
T Consensus 82 dp~~l~~~~~~vDvV~e~tg~~~ 104 (339)
T 2x5j_O 82 SLQSLPWRELGVDVVLDCTGVYG 104 (339)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCC
T ss_pred ChHHCcccccCCCEEEECCCccc
Confidence 44443 22 7899999998754
No 474
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=95.44 E-value=0.015 Score=52.40 Aligned_cols=35 Identities=23% Similarity=0.230 Sum_probs=32.3
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCN 39 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~ 39 (316)
.++|.|||+|..|.++|..|++.|++|+++++++.
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~ 57 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKE 57 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 46899999999999999999999999999998754
No 475
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=95.42 E-value=0.014 Score=52.72 Aligned_cols=37 Identities=19% Similarity=0.186 Sum_probs=32.1
Q ss_pred CCCCeEEEEccchhhHHHHHHHHhCCCe-EEEEeCChh
Q 021213 3 FFDQSVGFIGLGNMGFRMASNLMKAGYK-MAVHDVNCN 39 (316)
Q Consensus 3 ~~~~~IgiiG~G~mG~~la~~l~~~g~~-V~~~~r~~~ 39 (316)
|...+|.|||.|..|.++|..|++.|++ |+++++.+.
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~ 39 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 39 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 3357899999999999999999999999 999998643
No 476
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=95.41 E-value=0.021 Score=50.69 Aligned_cols=69 Identities=12% Similarity=0.122 Sum_probs=50.2
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCCh---hHHHHHHhCCCCCcC--CHHHHh----hcCCEEEEeCCCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC---NVMKMFSDMGVPTKE--TPFEVA----EASDVVITMLPSSS 73 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~---~~~~~l~~~g~~~~~--~~~~~~----~~adivi~~vp~~~ 73 (316)
..+|.|+|+|.+|...++.+...|.+|++.++++ ++.+.+.+.|+...+ +..+.+ ...|+||-++....
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 258 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGADV 258 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCCT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCChH
Confidence 4689999999999999999998999999999998 887777766654321 111111 24677777776543
No 477
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=95.41 E-value=0.03 Score=51.45 Aligned_cols=67 Identities=15% Similarity=0.208 Sum_probs=49.1
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChh-HHHHHHhC-CCCC---cCCHHHHhhcCCEEEEeCCCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCN-VMKMFSDM-GVPT---KETPFEVAEASDVVITMLPSS 72 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~-~~~~l~~~-g~~~---~~~~~~~~~~adivi~~vp~~ 72 (316)
.++|.|||.|..|..-++.|.+.|.+|++++++.. ..+.+.+. ++.. ..+ .+.++++|+||.++.++
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~-~~~l~~~~lVi~at~~~ 83 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFD-ETLLDSCWLAIAATDDD 83 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCC-GGGGTTCSEEEECCSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCC-ccccCCccEEEEcCCCH
Confidence 47899999999999999999999999999997532 34444432 3322 122 23457899999987654
No 478
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=95.40 E-value=0.013 Score=51.47 Aligned_cols=34 Identities=26% Similarity=0.376 Sum_probs=31.6
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC 38 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~ 38 (316)
+.+|.|||.|..|.+.|..|++.|++|+++++.+
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 4589999999999999999999999999999874
No 479
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=95.38 E-value=0.011 Score=53.11 Aligned_cols=34 Identities=24% Similarity=0.162 Sum_probs=31.6
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChh
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCN 39 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~ 39 (316)
.+|.|||.|..|..+|..|++.|++|+++++.+.
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~ 40 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARR 40 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 5899999999999999999999999999998654
No 480
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=95.38 E-value=0.039 Score=46.28 Aligned_cols=42 Identities=14% Similarity=0.127 Sum_probs=34.0
Q ss_pred CCCeEEEE-ccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHH
Q 021213 4 FDQSVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 45 (316)
Q Consensus 4 ~~~~Igii-G~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~ 45 (316)
..++|-|. |.|.+|..+++.|++.|++|++.+|++++.+.+.
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~ 53 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQA 53 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHH
Confidence 34567666 5689999999999999999999999887665443
No 481
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=95.38 E-value=0.036 Score=45.88 Aligned_cols=42 Identities=12% Similarity=0.097 Sum_probs=35.6
Q ss_pred CCeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh
Q 021213 5 DQSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 46 (316)
Q Consensus 5 ~~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~ 46 (316)
.++|-|.|. |.+|..+++.|++.|++|++.+|++++.+.+.+
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK 49 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 467888865 999999999999999999999999887765543
No 482
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=95.37 E-value=0.012 Score=51.44 Aligned_cols=35 Identities=26% Similarity=0.283 Sum_probs=31.5
Q ss_pred CCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChh
Q 021213 5 DQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCN 39 (316)
Q Consensus 5 ~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~ 39 (316)
+|+|.|.| .|.+|..++..|++.|++|++.+|++.
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 56 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLERGDKVVGIDNFAT 56 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 47899997 699999999999999999999999754
No 483
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=95.35 E-value=0.06 Score=45.20 Aligned_cols=41 Identities=22% Similarity=0.278 Sum_probs=34.0
Q ss_pred CeEEEE-ccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHh
Q 021213 6 QSVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 46 (316)
Q Consensus 6 ~~Igii-G~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~ 46 (316)
+++-|. |.|.+|.++++.|++.|++|++.+|++++.+.+.+
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 54 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVA 54 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 456666 46789999999999999999999999887765543
No 484
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=95.31 E-value=0.02 Score=50.91 Aligned_cols=64 Identities=17% Similarity=0.204 Sum_probs=44.3
Q ss_pred CCeEEEEc-cchhhHHHHHHHHhCCC-----eEEEEeCChhH----H----HHHHhCC------CCCcCCHHHHhhcCCE
Q 021213 5 DQSVGFIG-LGNMGFRMASNLMKAGY-----KMAVHDVNCNV----M----KMFSDMG------VPTKETPFEVAEASDV 64 (316)
Q Consensus 5 ~~~IgiiG-~G~mG~~la~~l~~~g~-----~V~~~~r~~~~----~----~~l~~~g------~~~~~~~~~~~~~adi 64 (316)
.+||+|+| +|.+|.+++-.|+..+. ++.+++.+.++ + ..+...- +...++..+.+++||+
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~~daDv 111 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDW 111 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHhCCCCE
Confidence 47999999 79999999999998763 26665443222 2 2233211 2334567888999999
Q ss_pred EEEe
Q 021213 65 VITM 68 (316)
Q Consensus 65 vi~~ 68 (316)
||++
T Consensus 112 VVit 115 (375)
T 7mdh_A 112 ALLI 115 (375)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9996
No 485
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=95.31 E-value=0.037 Score=45.84 Aligned_cols=42 Identities=12% Similarity=0.143 Sum_probs=34.7
Q ss_pred CCeEEEE-ccchhhHHHHHHHHhCC--CeEEEEeCChhHHHHHHh
Q 021213 5 DQSVGFI-GLGNMGFRMASNLMKAG--YKMAVHDVNCNVMKMFSD 46 (316)
Q Consensus 5 ~~~Igii-G~G~mG~~la~~l~~~g--~~V~~~~r~~~~~~~l~~ 46 (316)
.++|-|. |.|.+|..+++.|++.| ++|++.+|++++.+.+.+
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~ 47 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS 47 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh
Confidence 3466666 46899999999999999 999999999887766644
No 486
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.30 E-value=0.054 Score=48.36 Aligned_cols=44 Identities=20% Similarity=0.241 Sum_probs=39.3
Q ss_pred CeEEEEccchhhHHHHHHHHhCC-CeEEEEeCChhHHHHHHhCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAG-YKMAVHDVNCNVMKMFSDMGV 49 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g-~~V~~~~r~~~~~~~l~~~g~ 49 (316)
.+|.|+|+|.+|...++.+...| .+|++.++++++.+.+++.|+
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa 241 (380)
T 1vj0_A 197 KTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA 241 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCC
Confidence 57999999999999999888899 699999999999888877764
No 487
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.29 E-value=0.017 Score=51.20 Aligned_cols=66 Identities=20% Similarity=0.150 Sum_probs=51.7
Q ss_pred CeEEEEccchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcC------CHHHHh-hcCCEEEEeCCC
Q 021213 6 QSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKE------TPFEVA-EASDVVITMLPS 71 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~------~~~~~~-~~adivi~~vp~ 71 (316)
.+|.|+|+|.+|...++.+...|.+|++.++++++.+.+++.|+..+- +..+.+ ...|+||-|+..
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~ 253 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASS 253 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCC
Confidence 589999999999999998888899999999999998888887754321 222222 357999998875
No 488
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=95.29 E-value=0.01 Score=52.92 Aligned_cols=66 Identities=18% Similarity=0.199 Sum_probs=44.7
Q ss_pred CCeEEEEcc-chhhHHHHHHHHhCC-CeEEEEeCChhHHH-HHH-hCCCCC----cCC---HHHHhhcCCEEEEeCC
Q 021213 5 DQSVGFIGL-GNMGFRMASNLMKAG-YKMAVHDVNCNVMK-MFS-DMGVPT----KET---PFEVAEASDVVITMLP 70 (316)
Q Consensus 5 ~~~IgiiG~-G~mG~~la~~l~~~g-~~V~~~~r~~~~~~-~l~-~~g~~~----~~~---~~~~~~~adivi~~vp 70 (316)
+|+|.|.|+ |.+|..++..|++.| ++|++.+|+++... .+. ..++.. ..+ ..++++.+|+||-+..
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~ 108 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLAT 108 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence 368999985 999999999999999 99999999765321 111 111110 112 2345567899888654
No 489
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=95.28 E-value=0.011 Score=50.75 Aligned_cols=60 Identities=15% Similarity=0.242 Sum_probs=42.1
Q ss_pred CeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCHHHHhhc--CCEEEEeCC
Q 021213 6 QSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEA--SDVVITMLP 70 (316)
Q Consensus 6 ~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~--adivi~~vp 70 (316)
|||.|.|+ |.+|+.+++.|. .||+|++.+|++... ...+.-..+..+++++ +|+||-+..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~----~~D~~d~~~~~~~~~~~~~d~vih~a~ 63 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSKEF----CGDFSNPKGVAETVRKLRPDVIVNAAA 63 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCSSS----CCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccccc----cccCCCHHHHHHHHHhcCCCEEEECcc
Confidence 58999986 999999999999 899999999976210 0001111123455555 999998753
No 490
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=95.28 E-value=0.0081 Score=55.06 Aligned_cols=35 Identities=29% Similarity=0.247 Sum_probs=32.2
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCChh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCN 39 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~~ 39 (316)
..+|.|||+|..|...|..|++.|++|+++++.+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~ 40 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPW 40 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 46899999999999999999999999999998754
No 491
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.28 E-value=0.047 Score=47.76 Aligned_cols=68 Identities=13% Similarity=0.201 Sum_probs=43.9
Q ss_pred CeEEEEccchhhHHHHHHHHhC---CCeEEEE-eC-ChhHHHHHHh----CC-------------------CCC--cCCH
Q 021213 6 QSVGFIGLGNMGFRMASNLMKA---GYKMAVH-DV-NCNVMKMFSD----MG-------------------VPT--KETP 55 (316)
Q Consensus 6 ~~IgiiG~G~mG~~la~~l~~~---g~~V~~~-~r-~~~~~~~l~~----~g-------------------~~~--~~~~ 55 (316)
.||||+|.|++|..+.+.|.++ ..+|... ++ +++....+.+ .| +.. ..++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 80 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP 80 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCCh
Confidence 4899999999999999998876 3676655 43 3444433331 11 111 1245
Q ss_pred HHH-hh--cCCEEEEeCCCCh
Q 021213 56 FEV-AE--ASDVVITMLPSSS 73 (316)
Q Consensus 56 ~~~-~~--~adivi~~vp~~~ 73 (316)
+++ .+ ++|+||.|+|...
T Consensus 81 ~~l~w~~~~vDvV~~atg~~~ 101 (332)
T 1hdg_O 81 SKLPWKDLGVDFVIESTGVFR 101 (332)
T ss_dssp GGSCHHHHTCCEEEECSSSCC
T ss_pred HHCcccccCCCEEEECCccch
Confidence 444 23 7999999998754
No 492
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.27 E-value=0.036 Score=44.40 Aligned_cols=43 Identities=19% Similarity=0.195 Sum_probs=37.2
Q ss_pred CeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCC
Q 021213 6 QSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMG 48 (316)
Q Consensus 6 ~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g 48 (316)
++|.|+| .|.+|..+++.+...|.+|++.++++++.+.+.+.|
T Consensus 40 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g 83 (198)
T 1pqw_A 40 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLG 83 (198)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTC
T ss_pred CEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcC
Confidence 6789999 699999999999999999999999988877665544
No 493
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=95.27 E-value=0.031 Score=46.27 Aligned_cols=40 Identities=10% Similarity=0.169 Sum_probs=33.7
Q ss_pred CeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHHH
Q 021213 6 QSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 45 (316)
Q Consensus 6 ~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~ 45 (316)
+++-|.| .|.+|.++++.|++.|++|.+.+|+.++.+.+.
T Consensus 4 k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~ 44 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQE 44 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 4566665 588999999999999999999999988776554
No 494
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=95.27 E-value=0.024 Score=53.32 Aligned_cols=33 Identities=24% Similarity=0.434 Sum_probs=29.9
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVN 37 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~ 37 (316)
..+|.|||+|..|+.++..|++.|. +++++|.+
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D 360 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 360 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4689999999999999999999995 79999765
No 495
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=95.26 E-value=0.048 Score=48.08 Aligned_cols=33 Identities=30% Similarity=0.485 Sum_probs=30.0
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCC-eEEEEeCC
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGY-KMAVHDVN 37 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~-~V~~~~r~ 37 (316)
..+|.|||+|..|+.++.+|+..|. +++++|.+
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d 69 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHE 69 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 4689999999999999999999996 89999865
No 496
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=95.26 E-value=0.028 Score=47.30 Aligned_cols=41 Identities=15% Similarity=0.163 Sum_probs=34.8
Q ss_pred CCeEEEEcc-c-hhhHHHHHHHHhCCCeEEEEeCChhHHHHHH
Q 021213 5 DQSVGFIGL-G-NMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 45 (316)
Q Consensus 5 ~~~IgiiG~-G-~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~ 45 (316)
.+++-|.|. | .+|.++++.|++.|++|++.+|+.++.+...
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~ 64 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETR 64 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHH
Confidence 356778898 8 5999999999999999999999988765543
No 497
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=95.26 E-value=0.0029 Score=55.72 Aligned_cols=89 Identities=15% Similarity=0.168 Sum_probs=51.8
Q ss_pred CeEEEEc-cchhhHHHHHHHHhCCCe---EEEEeCChhHHHH--HHhCCCCCcCCHHHHhhcCCEEEEeCCCChhhHHHH
Q 021213 6 QSVGFIG-LGNMGFRMASNLMKAGYK---MAVHDVNCNVMKM--FSDMGVPTKETPFEVAEASDVVITMLPSSSHQVLDV 79 (316)
Q Consensus 6 ~~IgiiG-~G~mG~~la~~l~~~g~~---V~~~~r~~~~~~~--l~~~g~~~~~~~~~~~~~adivi~~vp~~~~~~~~v 79 (316)
+||+|+| .|+.|.-|.+.|.++.|+ +.........-+. +............+.++++|+||.|+|.... ++.
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~s--~~~ 79 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFRGQEIEVEDAETADPSGLDIALFSAGSAMS--KVQ 79 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEETTEEEEEEETTTSCCTTCSEEEECSCHHHH--HHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceeecCCceEEEeCCHHHhccCCEEEECCChHHH--HHH
Confidence 6899999 899999999999987554 4444322110000 1100011111111334689999999997653 444
Q ss_pred hcCCCCcccCCCCCCCeEEEEcCCC
Q 021213 80 YNGPNGLLQGGNSVRPQLLIDSSTI 104 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~vi~~st~ 104 (316)
... +++ .+..+||.|+.
T Consensus 80 a~~---~~~-----~G~~vID~Sa~ 96 (344)
T 3tz6_A 80 APR---FAA-----AGVTVIDNSSA 96 (344)
T ss_dssp HHH---HHH-----TTCEEEECSST
T ss_pred HHH---HHh-----CCCEEEECCCc
Confidence 332 222 45688998875
No 498
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=95.26 E-value=0.028 Score=48.44 Aligned_cols=65 Identities=12% Similarity=0.110 Sum_probs=49.2
Q ss_pred CeEEEEcc-chhhHHHHHHHHhCCCeEEEEeCChhHHHHHHhCCCCCcCCH---H---HHhhcCCEEEEeCCC
Q 021213 6 QSVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETP---F---EVAEASDVVITMLPS 71 (316)
Q Consensus 6 ~~IgiiG~-G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~~~g~~~~~~~---~---~~~~~adivi~~vp~ 71 (316)
.+|.|+|+ |.+|...++.+...|.+|++.++++++.+.+.+.|....-+. . +.+...|+||- +..
T Consensus 127 ~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~ 198 (302)
T 1iz0_A 127 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG 198 (302)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH
Confidence 57999998 999999999999999999999999999888877775432111 1 12245677777 654
No 499
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=95.26 E-value=0.03 Score=47.31 Aligned_cols=43 Identities=21% Similarity=0.282 Sum_probs=34.5
Q ss_pred CCCCeEEEEc-cchhhHHHHHHHHhCCCeEEEEeCChhHHHHHH
Q 021213 3 FFDQSVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 45 (316)
Q Consensus 3 ~~~~~IgiiG-~G~mG~~la~~l~~~g~~V~~~~r~~~~~~~l~ 45 (316)
++.+++-|.| .|.+|.++++.|++.|++|++.+|++++.+.+.
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~ 45 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIA 45 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 3345566665 578999999999999999999999988766553
No 500
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=95.23 E-value=0.018 Score=48.93 Aligned_cols=34 Identities=24% Similarity=0.179 Sum_probs=31.3
Q ss_pred CCeEEEEccchhhHHHHHHHHhCCCeEEEEeCCh
Q 021213 5 DQSVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC 38 (316)
Q Consensus 5 ~~~IgiiG~G~mG~~la~~l~~~g~~V~~~~r~~ 38 (316)
+.+|.|||.|.-|...|..|++.|++|+++++++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3689999999999999999999999999999754
Done!