Query 021216
Match_columns 316
No_of_seqs 144 out of 1604
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 08:31:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021216.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021216hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 3.5E-57 7.6E-62 418.3 34.2 301 15-315 59-362 (365)
2 KOG0697 Protein phosphatase 1B 100.0 1.4E-50 3.1E-55 345.5 24.5 283 3-292 1-300 (379)
3 PTZ00224 protein phosphatase 2 100.0 6.2E-48 1.4E-52 357.8 32.1 266 3-286 1-274 (381)
4 KOG0698 Serine/threonine prote 100.0 2.4E-45 5.3E-50 337.6 30.1 266 18-291 36-312 (330)
5 PF00481 PP2C: Protein phospha 100.0 7.9E-47 1.7E-51 336.9 16.8 247 22-275 1-254 (254)
6 COG0631 PTC1 Serine/threonine 100.0 8.4E-44 1.8E-48 317.4 20.7 241 18-286 5-255 (262)
7 KOG0699 Serine/threonine prote 100.0 4.9E-43 1.1E-47 309.0 20.8 273 3-285 1-505 (542)
8 cd00143 PP2Cc Serine/threonine 100.0 1.2E-39 2.5E-44 289.5 29.7 246 21-282 1-254 (254)
9 smart00332 PP2Cc Serine/threon 100.0 9.1E-39 2E-43 284.3 28.9 244 20-280 5-255 (255)
10 PRK14559 putative protein seri 100.0 1.1E-38 2.4E-43 311.4 25.5 253 19-288 373-640 (645)
11 KOG0700 Protein phosphatase 2C 100.0 8.4E-35 1.8E-39 262.7 20.7 215 56-270 96-378 (390)
12 KOG1323 Serine/threonine phosp 100.0 1.4E-26 3.1E-31 203.0 21.2 230 56-287 141-491 (493)
13 KOG1379 Serine/threonine prote 99.9 3.6E-24 7.9E-29 187.8 21.7 206 34-281 90-329 (330)
14 KOG0618 Serine/threonine phosp 99.9 1E-22 2.2E-27 199.7 16.1 252 12-285 513-774 (1081)
15 PF13672 PP2C_2: Protein phosp 99.8 9.8E-20 2.1E-24 157.8 15.2 178 26-248 3-194 (212)
16 smart00331 PP2C_SIG Sigma fact 99.8 9.3E-18 2E-22 143.3 21.8 185 22-267 5-192 (193)
17 TIGR02865 spore_II_E stage II 99.7 5.5E-15 1.2E-19 149.5 21.7 193 29-282 561-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.6 4.8E-13 1E-17 113.9 19.6 178 57-283 2-193 (193)
19 COG2208 RsbU Serine phosphatas 98.5 1.5E-05 3.3E-10 74.8 20.6 175 58-283 174-366 (367)
20 PRK10693 response regulator of 80.1 22 0.00047 32.3 10.5 93 57-152 161-259 (303)
21 COG3700 AphA Acid phosphatase 58.4 14 0.00031 30.9 3.7 49 222-270 71-130 (237)
22 PF09436 DUF2016: Domain of un 50.8 6.5 0.00014 27.6 0.5 33 206-238 10-43 (72)
23 COG2168 DsrH Uncharacterized c 27.8 38 0.00082 25.2 1.4 51 218-276 22-72 (96)
24 PF01436 NHL: NHL repeat; Int 26.9 1.2E+02 0.0026 16.6 3.6 21 127-147 8-28 (28)
25 PF06972 DUF1296: Protein of u 26.5 1.2E+02 0.0026 20.4 3.5 27 236-265 19-45 (60)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=3.5e-57 Score=418.29 Aligned_cols=301 Identities=61% Similarity=1.011 Sum_probs=261.5
Q ss_pred cCcCCceeEEEeeecCCCCCCcccEEEecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCChHH
Q 021216 15 SEFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPIC 94 (316)
Q Consensus 15 ~~~~~~~~~g~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~~ 94 (316)
...+|.+++|.+|++|.|+.|||++++..+.....+.......+..||+|||||||..+|++|++.+.+.|.+.......
T Consensus 59 ~~~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~ 138 (365)
T PLN03145 59 TEFIPVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPRE 138 (365)
T ss_pred hhccCceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchh
Confidence 34578899999999999999999998766432211111111234689999999999999999999999999876666667
Q ss_pred HHHHHHHHHHHHHHHHHhcCC--CCCCCCccEEEEEEeCCeEEEEEeccccEEEEecCeeeeeCCCCCCCChhHHHHHHH
Q 021216 95 VEKAIKSAFVRADYAFADNSS--LDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEK 172 (316)
Q Consensus 95 ~~~~l~~a~~~~~~~l~~~~~--~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~~~g~~~~lt~dh~~~~~~e~~ri~~ 172 (316)
+.++|+++|..+++.+.+... ....+|||++++++.++.+|++|+||||+|+++++++++||+||++.++.|+.||.+
T Consensus 139 ~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~ 218 (365)
T PLN03145 139 IEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEA 218 (365)
T ss_pred HHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHH
Confidence 788999999999999876432 223599999999999999999999999999999999999999999999999999999
Q ss_pred cCCEEEcceecCceecccccCCcccCCCCCC-CCCCCCCCeeEEEEecCCCeEEEEEcCCccccCCHHHHHHHHHHHHhc
Q 021216 173 LGGVVYDGYLNGQLSVARALGDWHMKSPKGS-ACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELML 251 (316)
Q Consensus 173 ~g~~~~~~~~~g~~~ltralG~~~~~~~~~~-~~~v~~~p~i~~~~l~~~d~~lvL~SDGv~d~l~~~ei~~~i~~~~~~ 251 (316)
.||.+..++.++.+++||+||++.+|..... ..++.++|++..+++.++|+||||||||||++++++++.+++...+..
T Consensus 219 ~Gg~v~~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~ 298 (365)
T PLN03145 219 SGGYVYDGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQE 298 (365)
T ss_pred cCCceecceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhc
Confidence 9999988888999999999999887643211 124678999999999999999999999999999999999998876666
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCceEEEEEEcCCCCCCCCCCCCCccccccchhhHHHHhhhccC
Q 021216 252 HNDPERCSRELVREALKRNTCDNLTVIVICFSPDPPPRIEMPPSRVRRSISAEGLNVLKGVLDG 315 (316)
Q Consensus 252 ~~~~~~~a~~l~~~a~~~~~~DN~TvIvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (316)
..+++++|+.|++.|+.+++.||+|||||+|+..+++....+++.++|+++..|+..|+.++++
T Consensus 299 ~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (365)
T PLN03145 299 HNDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQPPPNLVAPRPRVQRSISAEGLRELQSFLDS 362 (365)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCEEEEEEEeecCCCccccccccccccccCHHHHHHHHHhhhc
Confidence 6789999999999999999999999999999999999999999999999999999999999875
No 2
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-50 Score=345.51 Aligned_cols=283 Identities=33% Similarity=0.538 Sum_probs=249.0
Q ss_pred cCCccccCCCcc---cCcCCceeEEEeeecCCCCCCcccEEEecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHH
Q 021216 3 VGVVNKTSSDEK---SEFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRA 79 (316)
Q Consensus 3 ~~~~~~~~~~~~---~~~~~~~~~g~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~a~~ 79 (316)
||-+|--|..++ .+.-+.++||.+|++|||..|||++...-...... .+..||+|||||-|.++|.+|++
T Consensus 1 MGaFLdKPkteKhn~~G~GNglryg~SSMQGWR~eMEDah~A~~~l~~~l-------~dWSfFAVfDGHAGs~va~~c~~ 73 (379)
T KOG0697|consen 1 MGAFLDKPKTEKHNAEGEGNGLRYGVSSMQGWRVEMEDAHTAVAGLPSPL-------EDWSFFAVFDGHAGSQVANHCAE 73 (379)
T ss_pred CCccccCcccccccccCcCCceeeeeccccchhhhhhhhhhhhhcCCCCc-------cCceEEEEEcCccchHHHHHHHH
Confidence 788888888554 34578899999999999999999997765543222 57899999999999999999999
Q ss_pred HHHHHHHhcCCC--------hHHHHHHHHHHHHHHHHHHHhcC---CCCCCCCccEEEEEEeCCeEEEEEeccccEEEEe
Q 021216 80 NILRFIVEDSHF--------PICVEKAIKSAFVRADYAFADNS---SLDISSGTTALTALIFGRNLIIANAGDCRAVLGR 148 (316)
Q Consensus 80 ~~~~~l~~~~~~--------~~~~~~~l~~a~~~~~~~l~~~~---~~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~~ 148 (316)
.+.+.+.....+ -++.+.-|+..|.++|+...... ....++|||++.+++....+|++|+||||++++|
T Consensus 74 hLlehi~sse~F~~~~k~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~r 153 (379)
T KOG0697|consen 74 HLLEHIISSEEFRGMTKNGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCR 153 (379)
T ss_pred HHHHHhhhhHHHhhhccCCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheec
Confidence 999988764332 33788899999999998776433 2234599999999999999999999999999999
Q ss_pred cCeeeeeCCCCCCCChhHHHHHHHcCCEEEcceecCceecccccCCcccCCCCCC---CCCCCCCCeeEEEEecCCCeEE
Q 021216 149 RGRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYLNGQLSVARALGDWHMKSPKGS---ACPLSAEPELQETLLTEDDEFL 225 (316)
Q Consensus 149 ~g~~~~lt~dh~~~~~~e~~ri~~~g~~~~~~~~~g~~~ltralG~~~~~~~~~~---~~~v~~~p~i~~~~l~~~d~~l 225 (316)
+|+++.-|.||.|.+|.|++||+.+||.+.-.+.+|.++++|||||++||...+. ...++++|++......+.|+||
T Consensus 154 ng~~~f~TqDHKP~~p~EkeRIqnAGGSVMIqRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFi 233 (379)
T KOG0697|consen 154 NGEVVFSTQDHKPYLPKEKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFI 233 (379)
T ss_pred CCceEEeccCCCCCChHHHHHHhcCCCeEEEEEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEE
Confidence 9999999999999999999999999999999999999999999999999987643 3458899999999999888999
Q ss_pred EEEcCCccccCCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhCCCCCceEEEEEEcCCCCCCCCCC
Q 021216 226 IMGCDGLWDVMSSQGAVTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDPPPRIEM 292 (316)
Q Consensus 226 vL~SDGv~d~l~~~ei~~~i~~~~~~~~~~~~~a~~l~~~a~~~~~~DN~TvIvv~~~~~~~~~~~~ 292 (316)
||++||+||+++++|+++++...+.-..+...+++.+++.++-.|+.||+|+|++.|+..++...+.
T Consensus 234 vlACDGIwDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLhKGSRDNMsivlvcfp~APkv~~ea 300 (379)
T KOG0697|consen 234 VLACDGIWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLHKGSRDNMSIVLVCFPGAPKVSIEA 300 (379)
T ss_pred EEEccchhhhcccHHHHHHHHhhheecccHHHHHHHHHHHHHhccCccCceEEEEecCCCCCCCHHH
Confidence 9999999999999999999999887888999999999999999999999999999999887765543
No 3
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=6.2e-48 Score=357.82 Aligned_cols=266 Identities=25% Similarity=0.442 Sum_probs=225.3
Q ss_pred cCCccccCCCccc---CcCCceeEEEeeecCCCCCCcccEEEecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHH
Q 021216 3 VGVVNKTSSDEKS---EFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRA 79 (316)
Q Consensus 3 ~~~~~~~~~~~~~---~~~~~~~~g~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~a~~ 79 (316)
||..|..|..... .....+++|+.+++|+|++|||++++... ++..+|+|||||||..+|.++++
T Consensus 1 mg~~l~~p~~~~~~~~~~~~~~~~g~~s~~G~R~~nED~~~v~~~------------~~~~lfgVfDGHgG~~~S~~~~~ 68 (381)
T PTZ00224 1 MGIMLPKPVLSKLVDRAGNSIFRCASACVNGYRESMEDAHLLYLT------------DDWGFFGVFDGHVNDECSQYLAR 68 (381)
T ss_pred CCccCCCCccccccccCCCccEEEEEEeCCCCCCCCCCeeEeccC------------CCceEEEEEeCCCcHHHHHHHHH
Confidence 8888888874433 34677999999999999999999876432 24469999999999999999999
Q ss_pred HHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEEe-CCeEEEEEeccccEEEEecCeeeeeCCC
Q 021216 80 NILRFIVEDSHFPICVEKAIKSAFVRADYAFADNSSLDISSGTTALTALIF-GRNLIIANAGDCRAVLGRRGRAIEMSKD 158 (316)
Q Consensus 80 ~~~~~l~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~gtT~~~~~i~-~~~l~~a~vGDSr~yl~~~g~~~~lt~d 158 (316)
.+...+.+..... ..+.|+++|..+|+.+.+... .+|||++++++. +..++++|+||||+|++++|++++||+|
T Consensus 69 ~l~~~l~~~~~~~--~~~~l~~a~~~~d~~i~~~~~---~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~D 143 (381)
T PTZ00224 69 AWPQALEKEPEPM--TDERMEELCLEIDEEWMDSGR---EGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATED 143 (381)
T ss_pred HHHHHHHhccccc--cHHHHHHHHHHHHHHHHhccc---CCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccC
Confidence 9998876532211 234588999999999985443 469999988886 5799999999999999999999999999
Q ss_pred CCCCChhHHHHHHHcCCEEEcceecCceecccccCCcccCCCCC---CCCCCCCCCeeEEEEecCCCeEEEEEcCCccc-
Q 021216 159 HKPNCTSERLRIEKLGGVVYDGYLNGQLSVARALGDWHMKSPKG---SACPLSAEPELQETLLTEDDEFLIMGCDGLWD- 234 (316)
Q Consensus 159 h~~~~~~e~~ri~~~g~~~~~~~~~g~~~ltralG~~~~~~~~~---~~~~v~~~p~i~~~~l~~~d~~lvL~SDGv~d- 234 (316)
|++.++.|+.||...++.+...+.+|.+.+||+||+..+|.+.. ....+.++|++..+.+.++| ||||||||||+
T Consensus 144 H~~~~~~E~~RI~~~gg~v~~~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~~D-~llLaSDGL~d~ 222 (381)
T PTZ00224 144 HKPNNPGERQRIEACGGRVVSNRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQSND-FIILACDGVFEG 222 (381)
T ss_pred CCCCCHHHHhHHHHccCEeccccccCceeeecccCCcccccccccccccCcceeeeEEEEEECCCCC-EEEEECCCcCcC
Confidence 99999999999999999998888889999999999988876542 22346789999999988766 99999999999
Q ss_pred cCCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhCCCCCceEEEEEEcCCCC
Q 021216 235 VMSSQGAVTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDP 286 (316)
Q Consensus 235 ~l~~~ei~~~i~~~~~~~~~~~~~a~~l~~~a~~~~~~DN~TvIvv~~~~~~ 286 (316)
+++++++.+++...+....+++.+|+.|++.|+.+|+.||+|||||.|...+
T Consensus 223 ~ls~eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~~rGs~DNITvIvV~~~~~~ 274 (381)
T PTZ00224 223 NFSNEEVVAFVKEQLETCDDLAVVAGRVCDEAIRRGSKDNISCLIVQLKDGA 274 (381)
T ss_pred ccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCCCEEEEEEEeeCCC
Confidence 8999999999986554456899999999999999999999999999999764
No 4
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-45 Score=337.61 Aligned_cols=266 Identities=39% Similarity=0.601 Sum_probs=225.8
Q ss_pred CCcee-EEEeeecCCCCCCcccEEEecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCChH---
Q 021216 18 LPVLR-SGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPI--- 93 (316)
Q Consensus 18 ~~~~~-~g~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~--- 93 (316)
...+. .+.++.+|+|..|||++............ ...+..+|||||||||..+|+|+.+.+...+.+......
T Consensus 36 ~~~~~~~~~~~~~~~r~~med~~~~~~~~~~~~~~---~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~ 112 (330)
T KOG0698|consen 36 NESYRLGSLLSIRGRRRKMEDRHVQLPDFLEEDVG---GEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQ 112 (330)
T ss_pred cccccceEEEecCCCCCccCcceeecccccccccC---CCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchH
Confidence 33444 44558888899999999887764311110 012578999999999999999999999999987655444
Q ss_pred HHHHHHHHHHH-HHHHHHHhcCCCCCCCCccEEEEEEeCC-eEEEEEeccccEEEEecC-eeeeeCCCCCCCChhHHHHH
Q 021216 94 CVEKAIKSAFV-RADYAFADNSSLDISSGTTALTALIFGR-NLIIANAGDCRAVLGRRG-RAIEMSKDHKPNCTSERLRI 170 (316)
Q Consensus 94 ~~~~~l~~a~~-~~~~~l~~~~~~~~~~gtT~~~~~i~~~-~l~~a~vGDSr~yl~~~g-~~~~lt~dh~~~~~~e~~ri 170 (316)
.+..+++++|. .+|..+.+.......+|||++++++.++ ++|+||+||||+++++.| ..++||.||+|..+.|+.||
T Consensus 113 ~~~~a~~~~F~~~~D~~~~~~~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI 192 (330)
T KOG0698|consen 113 DVKDALRRAFLTKTDSEFLEKREDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERI 192 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHH
Confidence 48899999999 5999998752223467888888888855 999999999999999866 89999999999999999999
Q ss_pred HHcCCEEEcc----eecCceecccccCCcccCCCCCCCCCCCCCCeeEEEEecCCCeEEEEEcCCccccCCHHHHHHHHH
Q 021216 171 EKLGGVVYDG----YLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVAR 246 (316)
Q Consensus 171 ~~~g~~~~~~----~~~g~~~ltralG~~~~~~~~~~~~~v~~~p~i~~~~l~~~d~~lvL~SDGv~d~l~~~ei~~~i~ 246 (316)
+..||++... +.+|.++++|+|||..+|.+ +++++|++....+...++||||+||||||+++++|++++++
T Consensus 193 ~~~GG~v~~~~~~~Rv~G~LavsRa~GD~~~k~~-----~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~ 267 (330)
T KOG0698|consen 193 EAAGGRVSNWGGVWRVNGVLAVSRAFGDVELKSQ-----GVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVR 267 (330)
T ss_pred HHcCCEEEEcCCcceEeceEEEeeecCCHHhcCC-----cEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHH
Confidence 9999999743 89999999999999999963 78999999999999989999999999999999999999999
Q ss_pred HHHhccCCHHHHHHHHHHHHHhCCCCCceEEEEEEcCCCCCCCCC
Q 021216 247 KELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDPPPRIE 291 (316)
Q Consensus 247 ~~~~~~~~~~~~a~~l~~~a~~~~~~DN~TvIvv~~~~~~~~~~~ 291 (316)
..+.....+..++..|.+.|..+++.||+|||||.|.++......
T Consensus 268 ~~~~~~~~~~~a~~~l~~~a~~~~s~DnitvvvV~l~~~~~~~~~ 312 (330)
T KOG0698|consen 268 DELASISSPLAAAKLLATEALSRGSKDNITVVVVRLKSSPKSPSS 312 (330)
T ss_pred HHhhccccHHHHHHHHHHHHhhcCCCCCeEEEEEEecCccccccC
Confidence 965555788999999999999999999999999999998766554
No 5
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=7.9e-47 Score=336.88 Aligned_cols=247 Identities=41% Similarity=0.669 Sum_probs=205.3
Q ss_pred eEEEeeecCCCCCCcccEEEecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCCh--HHHHHHH
Q 021216 22 RSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFP--ICVEKAI 99 (316)
Q Consensus 22 ~~g~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~--~~~~~~l 99 (316)
++|+.+.+|+|+.|||++++..+..... ...+..+|+|||||||..++.++++.+...+.+..... ..+.++|
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~~-----~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al 75 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSNS-----GNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEAL 75 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCCT-----TEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CcCeecCCCCCCcccCEEEEecCccccC-----CCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcc
Confidence 5899999999999999999988552111 11467899999999999999999999998776643222 2688999
Q ss_pred HHHHHH-HHHHHHhcCC--CCCCCCccEEEEEEeCCeEEEEEeccccEEEEecCeee-eeCCCCCCCChhHHHHHHHcCC
Q 021216 100 KSAFVR-ADYAFADNSS--LDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAI-EMSKDHKPNCTSERLRIEKLGG 175 (316)
Q Consensus 100 ~~a~~~-~~~~l~~~~~--~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~~~g~~~-~lt~dh~~~~~~e~~ri~~~g~ 175 (316)
..+|.. +++.+..... ....+|||++++++.++++|+||+||||+|+++.+... +||+||+|.++.|+.||.+.|+
T Consensus 76 ~~a~~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg 155 (254)
T PF00481_consen 76 RQAFLAFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGG 155 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-
T ss_pred cceeeecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeecccc
Confidence 999999 8888876211 34579999999999999999999999999999999888 9999999999999999999999
Q ss_pred EEE-cceecCceecccccCCcccCCCCCCCCCCCCCCeeEEEEecCCCeEEEEEcCCccccCCHHHHHHHHHHHHhccCC
Q 021216 176 VVY-DGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELMLHND 254 (316)
Q Consensus 176 ~~~-~~~~~g~~~ltralG~~~~~~~~~~~~~v~~~p~i~~~~l~~~d~~lvL~SDGv~d~l~~~ei~~~i~~~~~~~~~ 254 (316)
.+. ..+..|.+++||+||+..+|++. +.++.++|++..+.+.+++.|||||||||||+++++++.+++........+
T Consensus 156 ~v~~~~rv~g~l~~sRalGd~~~k~~~--~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~~~~~ 233 (254)
T PF00481_consen 156 RVSENGRVNGVLAVSRALGDFDLKPPG--KPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLNSGRS 233 (254)
T ss_dssp GEEETEEETTTBSSSB-EE-GGGTTCT--SSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHSH
T ss_pred ccccchhhhhccccccccccccccccc--cceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHHHHHhcCCc
Confidence 998 78899999999999999999843 447899999999999998889999999999999999999999998655556
Q ss_pred HHHHHHHHHHHHHhCCCCCce
Q 021216 255 PERCSRELVREALKRNTCDNL 275 (316)
Q Consensus 255 ~~~~a~~l~~~a~~~~~~DN~ 275 (316)
|+.+|+.|+++|+.+|+.|||
T Consensus 234 ~~~~a~~L~~~A~~~gs~DNi 254 (254)
T PF00481_consen 234 PQEAAEKLVDEAIARGSKDNI 254 (254)
T ss_dssp HHHHHHHHHHHHHHTTHHSHE
T ss_pred HHHHHHHHHHHHHhcCCCCCC
Confidence 999999999999999999996
No 6
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-44 Score=317.38 Aligned_cols=241 Identities=27% Similarity=0.390 Sum_probs=204.1
Q ss_pred CCceeEEEeeecCC-CCCCcccEEEecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCC-----C
Q 021216 18 LPVLRSGSCAEIGP-KQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSH-----F 91 (316)
Q Consensus 18 ~~~~~~g~~s~~G~-r~~neD~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~a~~~~~~~l~~~~~-----~ 91 (316)
...+.++..+..|. |.+|||++.+..+... .. ..||+|||||||++++++|++.+++.|.+... .
T Consensus 5 ~~~~~~~~~s~~g~~R~~NeD~~~~~~~~~~--------~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~ 75 (262)
T COG0631 5 ILSLKVAGLSDVGTVRKHNEDAFLIKPNENG--------NL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNS 75 (262)
T ss_pred cceeeeeeeccCCCccCCCCcceeeccccCC--------cc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccc
Confidence 34556666677775 7889999999764310 01 46999999999999999999999988876421 1
Q ss_pred hH-HHHHHHHHHHHHHHHHHHhcCC---CCCCCCccEEEEEEeCCeEEEEEeccccEEEEecCeeeeeCCCCCCCChhHH
Q 021216 92 PI-CVEKAIKSAFVRADYAFADNSS---LDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSER 167 (316)
Q Consensus 92 ~~-~~~~~l~~a~~~~~~~l~~~~~---~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~~~g~~~~lt~dh~~~~~~e~ 167 (316)
.. .+.+.+.+++..+++.+..... ....||||++++++.++++++|||||||+|++|+|.+++||+||++.++.++
T Consensus 76 ~~~~~~~~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~~~~ 155 (262)
T COG0631 76 LNESLEELLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVNRLEQ 155 (262)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHHHHHH
Confidence 11 1678999999999999987543 3357999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEcceecCceecccccCCcccCCCCCCCCCCCCCCeeEEEEecCCCeEEEEEcCCccccCCHHHHHHHHHH
Q 021216 168 LRIEKLGGVVYDGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARK 247 (316)
Q Consensus 168 ~ri~~~g~~~~~~~~~g~~~ltralG~~~~~~~~~~~~~v~~~p~i~~~~l~~~d~~lvL~SDGv~d~l~~~ei~~~i~~ 247 (316)
.|+...++.....+.+ .+|||||+.. .+.|++....+.++ +|+||||||||+.++++++.+++..
T Consensus 156 ~~~~~~~~~~~~~~~~---~ltralG~~~-----------~~~p~~~~~~~~~~-d~llL~SDGl~d~v~~~~i~~il~~ 220 (262)
T COG0631 156 RGIITPEEARSHPRRN---ALTRALGDFD-----------LLEPDITELELEPG-DFLLLCSDGLWDVVSDDEIVDILKN 220 (262)
T ss_pred hcCCCHHHHHhCccch---hhhhhcCCCc-----------ccceeEEEEEcCCC-CEEEEECCCCccCcCHHHHHHHHhc
Confidence 9988877666543333 8999999976 47899999999988 5999999999999999999999986
Q ss_pred HHhccCCHHHHHHHHHHHHHhCCCCCceEEEEEEcCCCC
Q 021216 248 ELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDP 286 (316)
Q Consensus 248 ~~~~~~~~~~~a~~l~~~a~~~~~~DN~TvIvv~~~~~~ 286 (316)
..+++.+++.|++.|+.+++.||+|+|+|.+..+.
T Consensus 221 ----~~~~~~~~~~li~~a~~~g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 221 ----SETPQEAADKLIELALEGGGPDNITVVLVRLNGEG 255 (262)
T ss_pred ----CCCHHHHHHHHHHHHHhcCCCCceEEEEEEeeccc
Confidence 36899999999999999999999999999998876
No 7
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-43 Score=309.04 Aligned_cols=273 Identities=37% Similarity=0.578 Sum_probs=236.3
Q ss_pred cCCccccCCCccc---CcCCceeEEEeeecCCCCCCcccEEEecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHH
Q 021216 3 VGVVNKTSSDEKS---EFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRA 79 (316)
Q Consensus 3 ~~~~~~~~~~~~~---~~~~~~~~g~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~a~~ 79 (316)
||--|++|..... +.-..+.||+++++|||..|||++-+..++. .++.+|+|+|||||.++|.|++.
T Consensus 1 MGAYLs~P~t~K~s~dg~g~lL~yg~s~MQGWRvsqEDAHNci~~ld----------~~t~mF~VYDGHGG~EVa~yca~ 70 (542)
T KOG0699|consen 1 MGAYLSKPITEKESEDGSGNLLSYGCSTMQGWRVSQEDAHNCIVDLD----------TDTHMFGVYDGHGGTEVAKYCAA 70 (542)
T ss_pred CcccccCCccccccccccCccchhchhhhhccccchhhhhccccccc----------CcceEEEEecCCCcHHHHHHHHH
Confidence 8888999985443 3346688999999999999999998877663 57899999999999999999999
Q ss_pred HHHHHHHhcCCChH-HHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 021216 80 NILRFIVEDSHFPI-CVEKAIKSAFVRADYAFADNS-------------------------------------------- 114 (316)
Q Consensus 80 ~~~~~l~~~~~~~~-~~~~~l~~a~~~~~~~l~~~~-------------------------------------------- 114 (316)
.++++|.+...+.. .+..+|++||..++..|....
T Consensus 71 kLPdflK~~k~yk~g~~~~aL~~AFl~fD~~l~~ee~~keLk~iag~~~~k~~~aeaDd~deed~a~l~EEa~~pl~ElL 150 (542)
T KOG0699|consen 71 KLPDFLKERKFYKAGDVAEALQKAFLDFDDFLRAEESMKELKDIAGEGKPKKAGAEADDEDEEDRADLIEEASVPLAELL 150 (542)
T ss_pred hhhHHHHhHHhhhcccHHHHHHHHHhchhhhhcCHHHHHHHHHHcCCCCcccccccccccchHHHHHHHHhccCcHHHHH
Confidence 99999988665544 467788888877665443100
Q ss_pred --------------------------------------------------------------------------------
Q 021216 115 -------------------------------------------------------------------------------- 114 (316)
Q Consensus 115 -------------------------------------------------------------------------------- 114 (316)
T Consensus 151 ~rY~G~~~hK~~~sp~~~~g~~s~e~~~~~~~~~eA~p~dst~~~ps~~~~p~A~A~~~~~s~~d~~te~g~~k~~g~~~ 230 (542)
T KOG0699|consen 151 KRYGGAGVHKSLLSPFLAKGDVSDESEDEDEDEEEAEPQDSTEREPSENEDPMASAEVVIESAEDKETEEGSPKKKGQKR 230 (542)
T ss_pred HHhcCCCccccccChhhhccCCccCCCcccccccccCCCCccccCcccccCCcccceeccccccccccccCCCCCCCccc
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 021216 115 -------------------------------------------------------------------------------- 114 (316)
Q Consensus 115 -------------------------------------------------------------------------------- 114 (316)
T Consensus 231 g~~g~~~~S~s~Kl~q~sKsef~fE~~~sS~d~~D~a~~EEeD~~k~~d~sd~~sse~~eneed~Ded~e~e~ddEE~~e 310 (542)
T KOG0699|consen 231 GQKGHPIQSESKKLNQSSKSEFDFETAPSSSDGVDGAATEEEDEVKSPDDSDAESSEFVENEEDDDEDAEDEQDDEEMVE 310 (542)
T ss_pred ccCCCcchhhhhhcccccccccccccCCCcccccccccccccccccCCcccccccchhcccccccccccccccchhhhhh
Confidence
Q ss_pred ------------C--CCCCCCccEEEEEEeCCeEEEEEeccccEEEEecCeeeeeCCCCCCCChhHHHHHHHcCCEEE-c
Q 021216 115 ------------S--LDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVY-D 179 (316)
Q Consensus 115 ------------~--~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~~~g~~~~lt~dh~~~~~~e~~ri~~~g~~~~-~ 179 (316)
. ....+|||++||++.+.+|++||.||||+++.|.|+.+-+|.||.|..+.|..||..+||.+. +
T Consensus 311 ~~map~~~~~~g~EePG~DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtlD 390 (542)
T KOG0699|consen 311 GSMAPLLLGSGGAEEPGEDSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTLD 390 (542)
T ss_pred hcccccccccccCcCCCCCCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEeec
Confidence 0 012379999999999999999999999999999999999999999999999999999999996 9
Q ss_pred ceecCceecccccCCcccCCCCCC---CCCCCCCCeeEEEEecCCCeEEEEEcCCccccCCHHHHHHHHHHHHhccCCHH
Q 021216 180 GYLNGQLSVARALGDWHMKSPKGS---ACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELMLHNDPE 256 (316)
Q Consensus 180 ~~~~g~~~ltralG~~~~~~~~~~---~~~v~~~p~i~~~~l~~~d~~lvL~SDGv~d~l~~~ei~~~i~~~~~~~~~~~ 256 (316)
++.+|.++|+|+||+..||..... -..|++.|+|+...|.+.++|+|+++||||.+++.++++++++..+.......
T Consensus 391 GRVNGGLNLSRA~GDHaYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls 470 (542)
T KOG0699|consen 391 GRVNGGLNLSRAFGDHAYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLS 470 (542)
T ss_pred ceecCccchhhhhhhhhhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHH
Confidence 999999999999999999886442 33588999999999999999999999999999999999999999888888889
Q ss_pred HHHHHHHHHHHhC------CCCCceEEEEEEcCCC
Q 021216 257 RCSRELVREALKR------NTCDNLTVIVICFSPD 285 (316)
Q Consensus 257 ~~a~~l~~~a~~~------~~~DN~TvIvv~~~~~ 285 (316)
.+++.|.+.+++. .++||+|||++.|++.
T Consensus 471 ~iceeL~D~CLAp~T~GDGTGCDNMT~ii~~Fkrk 505 (542)
T KOG0699|consen 471 EICEELCDACLAPSTDGDGTGCDNMTVIITTFKRK 505 (542)
T ss_pred HHHHHHHHhhcCCCCCCCCcCCCcceEEEEEeccc
Confidence 9999999999884 3689999999999954
No 8
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=1.2e-39 Score=289.49 Aligned_cols=246 Identities=43% Similarity=0.688 Sum_probs=210.4
Q ss_pred eeEEEeeecCCCCCCcccEEEecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCC-----hHHH
Q 021216 21 LRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHF-----PICV 95 (316)
Q Consensus 21 ~~~g~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~-----~~~~ 95 (316)
+.+++++..|.|+.|||++++...... .+..+|+|||||||+..+++|++.+++.+.+.... ...+
T Consensus 1 ~~~~~~~~~g~r~~neD~~~~~~~~~~---------~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~ 71 (254)
T cd00143 1 FSAGVSDKGGDRKTNEDAVVIKPNLNN---------EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDI 71 (254)
T ss_pred CceeeecCCCCCCCCcceEEEeccCCC---------CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHH
Confidence 457889999999999999998664310 15689999999999999999999999888764322 4567
Q ss_pred HHHHHHHHHHHHHHHHhcCC---CCCCCCccEEEEEEeCCeEEEEEeccccEEEEecCeeeeeCCCCCCCChhHHHHHHH
Q 021216 96 EKAIKSAFVRADYAFADNSS---LDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEK 172 (316)
Q Consensus 96 ~~~l~~a~~~~~~~l~~~~~---~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~~~g~~~~lt~dh~~~~~~e~~ri~~ 172 (316)
...|+.+|..+++.+..... ....+|||++++++.++.++++|+||||+|++++++++++|.||++.++.++.|+..
T Consensus 72 ~~~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~ 151 (254)
T cd00143 72 EEALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEK 151 (254)
T ss_pred HHHHHHHHHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHH
Confidence 88899999999999986543 234699999999999999999999999999999999999999999999999999999
Q ss_pred cCCEEEcceecCceecccccCCcccCCCCCCCCCCCCCCeeEEEEecCCCeEEEEEcCCccccCCHHHHHHHHHHHHhcc
Q 021216 173 LGGVVYDGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELMLH 252 (316)
Q Consensus 173 ~g~~~~~~~~~g~~~ltralG~~~~~~~~~~~~~v~~~p~i~~~~l~~~d~~lvL~SDGv~d~l~~~ei~~~i~~~~~~~ 252 (316)
.+++.......+...+|+++|...++. ++..+|++..+.+.+.+++|+|||||||++++++++.+++......
T Consensus 152 ~~~~~~~~~~~~~~~~t~~lG~~~~~~------~~~~~~~~~~~~l~~~~d~ill~SDG~~~~l~~~~i~~~~~~~~~~- 224 (254)
T cd00143 152 AGGRVSNGRVPGVLAVTRALGDFDLKP------GVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAK- 224 (254)
T ss_pred cCCcEEeCEEcCceeeccccCCccccC------CEEcCCeEEEEEeCCCCcEEEEECCCCeeccChHHHHHHHHHHhcc-
Confidence 999876667778889999999987664 4578999999999444458889999999999999999999885100
Q ss_pred CCHHHHHHHHHHHHHhCCCCCceEEEEEEc
Q 021216 253 NDPERCSRELVREALKRNTCDNLTVIVICF 282 (316)
Q Consensus 253 ~~~~~~a~~l~~~a~~~~~~DN~TvIvv~~ 282 (316)
.+++++|+.|++.|...++.||+|+|++.|
T Consensus 225 ~~~~~~a~~l~~~a~~~~~~Dn~t~i~~~~ 254 (254)
T cd00143 225 EDLQEAAQELVDLALRRGSHDNITVVVVRL 254 (254)
T ss_pred cCHHHHHHHHHHHHHhCCCCCCEEEEEEeC
Confidence 279999999999999999999999999875
No 9
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=9.1e-39 Score=284.34 Aligned_cols=244 Identities=44% Similarity=0.732 Sum_probs=209.5
Q ss_pred ceeEEEeeecCCCCCCcccEEEecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCCh----HHH
Q 021216 20 VLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFP----ICV 95 (316)
Q Consensus 20 ~~~~g~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~----~~~ 95 (316)
.+.+|+.+.+|.|..|||++++.... ..+..+|+|||||||..+|.++++.+.+.+.+..... ..+
T Consensus 5 ~~~~~~~~~~~~r~~neD~~~~~~~~----------~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (255)
T smart00332 5 GLRYGLSSMQGVRKPMEDAHVITPDL----------SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDV 74 (255)
T ss_pred ceeEEEecCCCCCCCCcceEEEeccC----------CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHH
Confidence 46678888889999999999886642 1367899999999999999999999998887643222 357
Q ss_pred HHHHHHHHHHHHHHHHhcCCC---CCCCCccEEEEEEeCCeEEEEEeccccEEEEecCeeeeeCCCCCCCChhHHHHHHH
Q 021216 96 EKAIKSAFVRADYAFADNSSL---DISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEK 172 (316)
Q Consensus 96 ~~~l~~a~~~~~~~l~~~~~~---~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~~~g~~~~lt~dh~~~~~~e~~ri~~ 172 (316)
.+.|++++..+++.+...... ...+|||++++++..+.++++|+||||+|+++++++.++|+||++.++.|+.||..
T Consensus 75 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~ 154 (255)
T smart00332 75 EEALRKAFLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEA 154 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHH
Confidence 888999999999999865433 24689999999999999999999999999999999999999999999999999999
Q ss_pred cCCEEEcceecCceecccccCCcccCCCCCCCCCCCCCCeeEEEEecCCCeEEEEEcCCccccCCHHHHHHHHHHHHhcc
Q 021216 173 LGGVVYDGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELMLH 252 (316)
Q Consensus 173 ~g~~~~~~~~~g~~~ltralG~~~~~~~~~~~~~v~~~p~i~~~~l~~~d~~lvL~SDGv~d~l~~~ei~~~i~~~~~~~ 252 (316)
.++.+......+...+||++|...+++ .+..+|++....+.+.+++|||||||||++++++++.+++......
T Consensus 155 ~~~~~~~~~~~~~~~lt~~~g~~~~~~------~i~~~p~~~~~~~~~~~d~ill~SDGv~~~l~~~~i~~~~~~~~~~- 227 (255)
T smart00332 155 AGGFVINGRVNGVLALSRAIGDFFLKP------YVSAEPDVTVVELTEKDDFLILASDGLWDVLSNQEVVDIVRKHLSK- 227 (255)
T ss_pred cCCEEECCeECCeEecccccCCHhhcC------CeEeeeEEEEEEecCCCcEEEEECCccccCCCHHHHHHHHHHHhhc-
Confidence 999988777788889999999987764 5678899999987444558889999999999999999999886211
Q ss_pred CCHHHHHHHHHHHHHhCCCCCceEEEEE
Q 021216 253 NDPERCSRELVREALKRNTCDNLTVIVI 280 (316)
Q Consensus 253 ~~~~~~a~~l~~~a~~~~~~DN~TvIvv 280 (316)
.++..+|+.|.+.|..++..||+|+|++
T Consensus 228 ~~~~~~~~~l~~~a~~~~~~Dn~T~ivv 255 (255)
T smart00332 228 SDPEEAAKRLIDLALARGSKDNITVIVV 255 (255)
T ss_pred CCHHHHHHHHHHHHHHcCCCCCeEEEEC
Confidence 2689999999999999999999999985
No 10
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=1.1e-38 Score=311.43 Aligned_cols=253 Identities=21% Similarity=0.210 Sum_probs=179.7
Q ss_pred CceeEEEeeecCC-CCCCcccEEEecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHh----cCCChH
Q 021216 19 PVLRSGSCAEIGP-KQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVE----DSHFPI 93 (316)
Q Consensus 19 ~~~~~g~~s~~G~-r~~neD~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~a~~~~~~~l~~----~~~~~~ 93 (316)
..++++.+|+.|. |++|||++.+...................+|+|||||||+.+++.||+.+++.|.+ ......
T Consensus 373 ~~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~ 452 (645)
T PRK14559 373 VSLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDEL 452 (645)
T ss_pred eeEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccc
Confidence 3588999999997 89999998775432110000000012346999999999988777777666665543 211111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC-----CCCCCCccEEEEEEeCCeEEEEEeccccEEEEe-cCeeeeeCCCCCCCChhHH
Q 021216 94 CVEKAIKSAFVRADYAFADNSS-----LDISSGTTALTALIFGRNLIIANAGDCRAVLGR-RGRAIEMSKDHKPNCTSER 167 (316)
Q Consensus 94 ~~~~~l~~a~~~~~~~l~~~~~-----~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~~-~g~~~~lt~dh~~~~~~e~ 167 (316)
...+.|+++|..+|+.+.+... ...+||||++++++.+++++++||||||+|+++ +|++++||+||++....
T Consensus 453 ~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~~~l-- 530 (645)
T PRK14559 453 PDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVGQRE-- 530 (645)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHHHHH--
Confidence 2356789999999999975321 223699999999999999999999999999985 68999999999975432
Q ss_pred HHHHHcCC--EEEcceecCceecccccCCcccCCCCCCCCCCCCCCeeEEEEecCCCeEEEEEcCCcccc--CCHHHHHH
Q 021216 168 LRIEKLGG--VVYDGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDV--MSSQGAVT 243 (316)
Q Consensus 168 ~ri~~~g~--~~~~~~~~g~~~ltralG~~~~~~~~~~~~~v~~~p~i~~~~l~~~d~~lvL~SDGv~d~--l~~~ei~~ 243 (316)
.+.|- .... ...+...+||+||+...+ ..+|++..+.+.+++ +|||||||||++ ++. .+.+
T Consensus 531 ---v~~Gi~~~~a~-~~p~~~~LTrALG~~~~~---------~l~Pdi~~~~L~~gD-~lLLCSDGL~D~~~ve~-~~~~ 595 (645)
T PRK14559 531 ---IQRGVEPQIAY-ARPDAYQLTQALGPRDNS---------AIQPDIQFLEIEEDT-LLLLCSDGLSDNDLLET-HWQT 595 (645)
T ss_pred ---HHhCCCHHHHh-cCcccceeeeccCCCCCC---------cccceEEEEEcCCCC-EEEEECCCCCCCcccch-HHHH
Confidence 22221 0011 123456899999986432 358999999998765 888999999994 443 2233
Q ss_pred HHHHHHhccCCHHHHHHHHHHHHHhCCCCCceEEEEEEcCCCCCC
Q 021216 244 VARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDPPP 288 (316)
Q Consensus 244 ~i~~~~~~~~~~~~~a~~l~~~a~~~~~~DN~TvIvv~~~~~~~~ 288 (316)
.+...+....++.++++.|++.|+.+++.||+|+|||+++..+.-
T Consensus 596 ~l~~il~~~~~l~~aa~~Li~~Al~~gg~DNITvIvV~l~~~p~~ 640 (645)
T PRK14559 596 HLLPLLSSSANLDQGLNKLIDLANQYNGHDNITAILVRLKVRPQL 640 (645)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHcCCCCcEEEEEEEeccCCCC
Confidence 333333335689999999999999999999999999999765543
No 11
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-35 Score=262.74 Aligned_cols=215 Identities=33% Similarity=0.490 Sum_probs=180.0
Q ss_pred CCCceEEEEEcCCChhHHHHHHHHHHHHHHHhc-------------CC---------------------ChHHHHHHHHH
Q 021216 56 PVPGAFYGVFDGHGGTDAALYVRANILRFIVED-------------SH---------------------FPICVEKAIKS 101 (316)
Q Consensus 56 ~~~~~l~~V~DG~GG~~~a~~a~~~~~~~l~~~-------------~~---------------------~~~~~~~~l~~ 101 (316)
.+.+.|+||||||||+++++++++.+..++..+ +. ....+.++|.+
T Consensus 96 ~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~ 175 (390)
T KOG0700|consen 96 ENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSK 175 (390)
T ss_pred cCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHH
Confidence 367889999999999999999999999887721 11 14568899999
Q ss_pred HHHHHHHHHHhcCC-------CCCCCCccEEEEEEeCCeEEEEEeccccEEEEe---cC---eeeeeCCCCCCCChhHHH
Q 021216 102 AFVRADYAFADNSS-------LDISSGTTALTALIFGRNLIIANAGDCRAVLGR---RG---RAIEMSKDHKPNCTSERL 168 (316)
Q Consensus 102 a~~~~~~~l~~~~~-------~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~~---~g---~~~~lt~dh~~~~~~e~~ 168 (316)
||.+.++.+..... .-..+|+|+++.++.+..+|+||+|||||+|.+ ++ ..+|||.||+.++++|++
T Consensus 176 Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~ 255 (390)
T KOG0700|consen 176 AFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVR 255 (390)
T ss_pred HHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHH
Confidence 99999999864221 113489999999999999999999999999954 23 579999999999999999
Q ss_pred HHHHcCC----EEEcc--eecCceecccccCCcccCCCCC---------------CCCCCCCCCeeEEEEecCCCeEEEE
Q 021216 169 RIEKLGG----VVYDG--YLNGQLSVARALGDWHMKSPKG---------------SACPLSAEPELQETLLTEDDEFLIM 227 (316)
Q Consensus 169 ri~~~g~----~~~~~--~~~g~~~ltralG~~~~~~~~~---------------~~~~v~~~p~i~~~~l~~~d~~lvL 227 (316)
||...+. .+... +..|.+.+|||||+..+|.+.- .++.++++|.++.++|.+.|+||||
T Consensus 256 Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIl 335 (390)
T KOG0700|consen 256 RIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLIL 335 (390)
T ss_pred HHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEE
Confidence 9999885 23333 8899999999999999998752 4778999999999999999999999
Q ss_pred EcCCccccCCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhCC
Q 021216 228 GCDGLWDVMSSQGAVTVARKELMLHNDPERCSRELVREALKRN 270 (316)
Q Consensus 228 ~SDGv~d~l~~~ei~~~i~~~~~~~~~~~~~a~~l~~~a~~~~ 270 (316)
+|||+|++++++|+++++...+.....-+.+|+.|++.|+.+.
T Consensus 336 ASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~a 378 (390)
T KOG0700|consen 336 ASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRA 378 (390)
T ss_pred eccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhh
Confidence 9999999999999999999865332334678999999998754
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.95 E-value=1.4e-26 Score=203.02 Aligned_cols=230 Identities=31% Similarity=0.465 Sum_probs=175.1
Q ss_pred CCCceEEEEEcCCChhHHHHHHHHHHHHHHHhc--------------------------------------CCC--hHHH
Q 021216 56 PVPGAFYGVFDGHGGTDAALYVRANILRFIVED--------------------------------------SHF--PICV 95 (316)
Q Consensus 56 ~~~~~l~~V~DG~GG~~~a~~a~~~~~~~l~~~--------------------------------------~~~--~~~~ 95 (316)
..++.+|.+||||.|..+|-.|++.+...+.+. +.. ..-+
T Consensus 141 ~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LV 220 (493)
T KOG1323|consen 141 RADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLV 220 (493)
T ss_pred CCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhh
Confidence 346789999999999999998888776555431 001 1125
Q ss_pred HHHHHHHHHHHHHHHHhcCCC-CCCCCccEEEEEEeCCeEEEEEeccccEEEEecCeeeeeCCCCCCCChhHHHHHHHcC
Q 021216 96 EKAIKSAFVRADYAFADNSSL-DISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLG 174 (316)
Q Consensus 96 ~~~l~~a~~~~~~~l~~~~~~-~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~~~g~~~~lt~dh~~~~~~e~~ri~~~g 174 (316)
..+|+.||+.+|+.+...... ...+|||+++++.-.+++|++|.||||++++|++++++||++.+|+ -||+|++..+
T Consensus 221 iGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTPe--tERqRlQ~La 298 (493)
T KOG1323|consen 221 IGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTPE--TERQRLQELA 298 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCcH--HHHHHHHHHh
Confidence 679999999999999875543 3458999999999999999999999999999999999999999975 5777777733
Q ss_pred --------CEEEcc-----------------------------------------------eecCceecccccCCcccCC
Q 021216 175 --------GVVYDG-----------------------------------------------YLNGQLSVARALGDWHMKS 199 (316)
Q Consensus 175 --------~~~~~~-----------------------------------------------~~~g~~~ltralG~~~~~~ 199 (316)
+.+... +.-+.+.+||.|||..++.
T Consensus 299 f~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lkv 378 (493)
T KOG1323|consen 299 FRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLKV 378 (493)
T ss_pred hcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceeee
Confidence 100000 0111233899999998887
Q ss_pred CCC---CCCCCCCCCeeEEEEec----CCCeEEEEEcCCccccCCHHHHHHHHHHHHhcc--CCH---HHHHHHHHHHHH
Q 021216 200 PKG---SACPLSAEPELQETLLT----EDDEFLIMGCDGLWDVMSSQGAVTVARKELMLH--NDP---ERCSRELVREAL 267 (316)
Q Consensus 200 ~~~---~~~~v~~~p~i~~~~l~----~~d~~lvL~SDGv~d~l~~~ei~~~i~~~~~~~--~~~---~~~a~~l~~~a~ 267 (316)
.+. -++.+.+.|++...++. -.|+.+||+|||+||+++++++..+++..+... .+| ..+|+.|+..|.
T Consensus 379 ~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdlva~ar 458 (493)
T KOG1323|consen 379 VDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDLVAAAR 458 (493)
T ss_pred ecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhc
Confidence 654 47788999999999886 356699999999999999999999998875433 234 356777777774
Q ss_pred h-------------CCCCCceEEEEEEcCCCCC
Q 021216 268 K-------------RNTCDNLTVIVICFSPDPP 287 (316)
Q Consensus 268 ~-------------~~~~DN~TvIvv~~~~~~~ 287 (316)
. .++.|||||.|+.+.-...
T Consensus 459 g~~k~rgWr~~n~~lgSgDDIsVfVIPL~~~~~ 491 (493)
T KOG1323|consen 459 GQQKDRGWRMNNGGLGSGDDISVFVIPLKYCAA 491 (493)
T ss_pred CccCCCceeccCCCcCCCCceEEEEEeccCCCC
Confidence 4 2468999999998875433
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.93 E-value=3.6e-24 Score=187.82 Aligned_cols=206 Identities=18% Similarity=0.248 Sum_probs=146.6
Q ss_pred CCcccEEEecccccccCCCCCCCCCceEEEEEcCCChhH-----HHHHHHHHH---HHHHHhcCCChHHHHHHHHHHHHH
Q 021216 34 YMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTD-----AALYVRANI---LRFIVEDSHFPICVEKAIKSAFVR 105 (316)
Q Consensus 34 ~neD~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~-----~a~~a~~~~---~~~l~~~~~~~~~~~~~l~~a~~~ 105 (316)
.-||+|++..+. ...+.|||||+|||. .+.|..+.+ .+.+.+......++...|..++.+
T Consensus 90 ~GEDa~Fvss~~------------~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~ 157 (330)
T KOG1379|consen 90 GGEDAWFVSSNP------------HAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAE 157 (330)
T ss_pred CCCcceeeccCc------------ccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHH
Confidence 359999998874 668999999999996 344333333 233333334444778888888776
Q ss_pred HHHHHHhcCCCCCCCCccEEEEEEe--CCeEEEEEeccccEEEEecCeeeeeCCCCCCCChhHHHHHHHcCCEEEcceec
Q 021216 106 ADYAFADNSSLDISSGTTALTALIF--GRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYLN 183 (316)
Q Consensus 106 ~~~~l~~~~~~~~~~gtT~~~~~i~--~~~l~~a~vGDSr~yl~~~g~~~~lt~dh~~~~~~e~~ri~~~g~~~~~~~~~ 183 (316)
+-+ .+...-++||++++.++ +++|++||+|||-..++|+|++++-|..+. ...+
T Consensus 158 l~~-----~~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~-------------------H~FN 213 (330)
T KOG1379|consen 158 LKS-----QKVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQ-------------------HYFN 213 (330)
T ss_pred Hhh-----cCCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchhe-------------------eccC
Confidence 532 22233578999999998 789999999999999999999999998775 1233
Q ss_pred CceecccccCCcccCCCCCCCCCCCCCCeeEEEEecCCCeEEEEEcCCccccCCHHHHHHHHHHHHh-ccCCHHHHHHHH
Q 021216 184 GQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELM-LHNDPERCSREL 262 (316)
Q Consensus 184 g~~~ltralG~~~~~~~~~~~~~v~~~p~i~~~~l~~~d~~lvL~SDGv~d~l~~~ei~~~i~~~~~-~~~~~~~~a~~l 262 (316)
-.++|+.. ...|..... ...-.-+.+.+.+.++| +|||+||||||++.+++|.+++..... ...+++..|+.+
T Consensus 214 ~PyQLs~~--p~~~~~~~~---d~p~~ad~~~~~v~~GD-vIilATDGlfDNl~e~~Il~il~~~~~~~~~~lq~~A~~i 287 (330)
T KOG1379|consen 214 TPYQLSSP--PEGYSSYIS---DVPDSADVTSFDVQKGD-VIILATDGLFDNLPEKEILSILKGLDARGNLDLQVTAQKI 287 (330)
T ss_pred CceeeccC--Ccccccccc---CCccccceEEEeccCCC-EEEEecccccccccHHHHHHHHHHhhccccccHHHHHHHH
Confidence 33333322 111110000 11223456778888887 888999999999999999999987765 556889999999
Q ss_pred HHHHHh-----------------------CCCCCceEEEEEE
Q 021216 263 VREALK-----------------------RNTCDNLTVIVIC 281 (316)
Q Consensus 263 ~~~a~~-----------------------~~~~DN~TvIvv~ 281 (316)
++.|.. .|..|+||+|+..
T Consensus 288 a~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~ 329 (330)
T KOG1379|consen 288 AEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSS 329 (330)
T ss_pred HHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEec
Confidence 999865 2458999999875
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.89 E-value=1e-22 Score=199.70 Aligned_cols=252 Identities=24% Similarity=0.409 Sum_probs=209.8
Q ss_pred CcccCcCCceeEEEeeecCCCCCCcccEEEecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCC
Q 021216 12 DEKSEFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHF 91 (316)
Q Consensus 12 ~~~~~~~~~~~~g~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~ 91 (316)
.......-.++||++...|.|..+--+.....+.. .+..+.||++||-+..+...+...++.+++.++-..
T Consensus 513 ~d~~~n~~~~t~Gv~~~~gqrnk~c~~~~~v~nf~---------~~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~ 583 (1081)
T KOG0618|consen 513 PDGNVNAFLWTYGVAGVSGQRNKVCSRAVWVENFF---------LNPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQL 583 (1081)
T ss_pred Cccccceeheeeccchhcccccchhhhhhhhhhcc---------cCCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 33444455667999999999866554443333221 146789999999999999999999999999876544
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEEeC--------CeEEEEEeccccEEEEecCeeeeeCCCCC-CC
Q 021216 92 PICVEKAIKSAFVRADYAFADNSSLDISSGTTALTALIFG--------RNLIIANAGDCRAVLGRRGRAIEMSKDHK-PN 162 (316)
Q Consensus 92 ~~~~~~~l~~a~~~~~~~l~~~~~~~~~~gtT~~~~~i~~--------~~l~~a~vGDSr~yl~~~g~~~~lt~dh~-~~ 162 (316)
..+-.+.|+.+|...++++...+.. -|..++.+.+.. ..++.||+|+|.++++++|+..++|+-.. .-
T Consensus 584 ~~~et~~mr~~fl~~~rklg~~g~~---lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v 660 (1081)
T KOG0618|consen 584 YGNETEQMRNTFLRLNRKLGEEGQV---LGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEV 660 (1081)
T ss_pred ccChHHHHHHHHHHHhhhhhhhhcc---ccchhhheeecccccCcccchhhhHhhhccchhhhhhcCCcCcccccccccC
Confidence 4444556999999999999765543 355566666653 37999999999999999999999888774 44
Q ss_pred ChhHHHHHHHcCCEEE-cceecCceecccccCCcccCCCCCCCCCCCCCCeeEEEEecCCCeEEEEEcCCccccCCHHHH
Q 021216 163 CTSERLRIEKLGGVVY-DGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGA 241 (316)
Q Consensus 163 ~~~e~~ri~~~g~~~~-~~~~~g~~~ltralG~~~~~~~~~~~~~v~~~p~i~~~~l~~~d~~lvL~SDGv~d~l~~~ei 241 (316)
.++|.+||.+.+|++. ++..+|....||++|.+...+ .+.+.|++....+.+.|+|||+++-++|++++-+++
T Consensus 661 ~~eE~~RI~~~~g~i~ed~k~ngvt~~tR~iG~~~l~P------~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a 734 (1081)
T KOG0618|consen 661 DREEYKRIVDSKGFITEDNKLNGVTSSTRAIGPFSLFP------HVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTA 734 (1081)
T ss_pred CHHHHHHHHHhcCeecCCCeeeceeeeeeecccccccc------cccCCCceeeEecccCceEEEEcchHHhhhccHHHH
Confidence 9999999999999997 788999999999999988776 688999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHhCCCCCceEEEEEEcCCC
Q 021216 242 VTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPD 285 (316)
Q Consensus 242 ~~~i~~~~~~~~~~~~~a~~l~~~a~~~~~~DN~TvIvv~~~~~ 285 (316)
++.+++ ..+|-.+|++|.+.|...|..||++++||++...
T Consensus 735 ~~~vRn----~~dpL~AAkKL~d~AqSYgc~~nv~vlVv~l~~~ 774 (1081)
T KOG0618|consen 735 VDAVRN----VEDPLLAAKKLCDLAQSYGCAENVSVLVVRLNHL 774 (1081)
T ss_pred HHHHhc----CCchHHHHHHHHHHHHhcccccCeeEEEEEeecc
Confidence 999996 4799999999999999999999999999999854
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.83 E-value=9.8e-20 Score=157.78 Aligned_cols=178 Identities=20% Similarity=0.204 Sum_probs=96.7
Q ss_pred eeecCCCCCCcccEEEecccccccCCCCCCCCCceEEEEEcCCChhHHHHH----HHHHHHHHHHhcCCChHH--HHHHH
Q 021216 26 CAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALY----VRANILRFIVEDSHFPIC--VEKAI 99 (316)
Q Consensus 26 ~s~~G~r~~neD~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~----a~~~~~~~l~~~~~~~~~--~~~~l 99 (316)
.+.+|.+..|||++.+... .+..+++||||+||...+.. +++.+...+......... ....+
T Consensus 3 ~sh~~~~~~nqD~~~~~~~------------~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~ 70 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTD------------DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALI 70 (212)
T ss_dssp ----TTSSS--EEEEEE-T------------CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred ccccCCCCCCCCCEEeeeC------------CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHH
Confidence 4667888999999996555 35567799999997665554 555555555554443332 22333
Q ss_pred HHHHHHHHHHH------HhcCCCCCCCCccEEEEEEeCCeEEEEEeccccEEE-EecCeeeeeCCCCCCCChhHHHHHHH
Q 021216 100 KSAFVRADYAF------ADNSSLDISSGTTALTALIFGRNLIIANAGDCRAVL-GRRGRAIEMSKDHKPNCTSERLRIEK 172 (316)
Q Consensus 100 ~~a~~~~~~~l------~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl-~~~g~~~~lt~dh~~~~~~e~~ri~~ 172 (316)
+.+...+...+ .........++||++++++.++.++++|+||||+|+ .++|++..++.+|+. +.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~----~~----- 141 (212)
T PF13672_consen 71 RAIKKEILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSG----EY----- 141 (212)
T ss_dssp HHHHHHHHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BH----HH-----
T ss_pred HHHHHHHHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccc----hh-----
Confidence 33333333221 111223346899999999999999999999999975 578999999999961 00
Q ss_pred cCCEEEcceecCceecccccCCcccCCCCCCCCCCCCCCeeEEEEecCCCeEEEEEcCCccccCCHHH-HHHHHHHH
Q 021216 173 LGGVVYDGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQG-AVTVARKE 248 (316)
Q Consensus 173 ~g~~~~~~~~~g~~~ltralG~~~~~~~~~~~~~v~~~p~i~~~~l~~~d~~lvL~SDGv~d~l~~~e-i~~~i~~~ 248 (316)
. ..+..+.... .....++..+++.+++ .|+|||||||+.+...+ +..++...
T Consensus 142 ---------~----~~~~~~~~~~----------~~~~~~~~~~~~~~~d-~ilL~SDG~~~~l~~~~~~~~~l~~~ 194 (212)
T PF13672_consen 142 ---------P----NQTRSLTGDD----------PEPDVQYGSIPLEEGD-VILLCSDGVWDNLRSYEDLEQFLKDL 194 (212)
T ss_dssp ---------H----HCTTSCCHHC----------CCTETEEEEEE--TT--EEEEE-HHHHTTS-HHHHHHHH----
T ss_pred ---------h----hhhhccCccc----------cccCCeEEEEEcCCCC-EEEEECcCccccCCCHHHHHHHhhhc
Confidence 0 1133333221 0122345556666666 67799999999998765 56665554
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.81 E-value=9.3e-18 Score=143.27 Aligned_cols=185 Identities=21% Similarity=0.148 Sum_probs=133.9
Q ss_pred eEEEeeecCCCCCCcccEEEecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 021216 22 RSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPICVEKAIKS 101 (316)
Q Consensus 22 ~~g~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~~~~~~l~~ 101 (316)
.++.....+. ...-|.+.+.... ++..+|+|+||+|+...|.+++..+...+.+...... .+.+
T Consensus 5 ~~~~~~~p~~-~~~GD~~~~~~~~-----------~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~----~~~~ 68 (193)
T smart00331 5 LIAQYYEDAT-QVGGDFYDVVKLP-----------EGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGI----SLSQ 68 (193)
T ss_pred EEEEEEcchH-hcCccEEEEEEeC-----------CCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCC----CHHH
Confidence 3444444333 4477888665543 4568999999999999999999888888865433222 2455
Q ss_pred HHHHHHHHHHhcCCCCCCCCccEEEEEE--eCCeEEEEEeccccEEEEe-cCeeeeeCCCCCCCChhHHHHHHHcCCEEE
Q 021216 102 AFVRADYAFADNSSLDISSGTTALTALI--FGRNLIIANAGDCRAVLGR-RGRAIEMSKDHKPNCTSERLRIEKLGGVVY 178 (316)
Q Consensus 102 a~~~~~~~l~~~~~~~~~~gtT~~~~~i--~~~~l~~a~vGDSr~yl~~-~g~~~~lt~dh~~~~~~e~~ri~~~g~~~~ 178 (316)
.+..+++.+.... ...+++|++++++ .+++++++|+||+|+|+++ ++...+++.+.
T Consensus 69 ~l~~~n~~l~~~~--~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~------------------- 127 (193)
T smart00331 69 ILERLNRAIYENG--EDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDL------------------- 127 (193)
T ss_pred HHHHHHHHHHhcC--CCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCC-------------------
Confidence 5666777776542 2358999999998 5779999999999999999 66666666543
Q ss_pred cceecCceecccccCCcccCCCCCCCCCCCCCCeeEEEEecCCCeEEEEEcCCccccCCHHHHHHHHHHHHhccCCHHHH
Q 021216 179 DGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELMLHNDPERC 258 (316)
Q Consensus 179 ~~~~~g~~~ltralG~~~~~~~~~~~~~v~~~p~i~~~~l~~~d~~lvL~SDGv~d~l~~~ei~~~i~~~~~~~~~~~~~ 258 (316)
+..+|... ...+....+.+.++| .|+|+|||+|+.++.+++.+++.... ..++++.
T Consensus 128 ----------~~~lG~~~-----------~~~~~~~~~~l~~gd-~l~l~TDGl~e~~~~~~l~~~l~~~~--~~~~~~~ 183 (193)
T smart00331 128 ----------GAPLGLEP-----------DVEVDVRELTLEPGD-LLLLYTDGLTEARNPERLEELLEELL--GSPPAEI 183 (193)
T ss_pred ----------CceeeeCC-----------CCcceeEEEeeCCCC-EEEEECCCccccCChHHHHHHHHHhc--CCCHHHH
Confidence 24566432 334667778888887 77799999999999999999988763 3468888
Q ss_pred HHHHHHHHH
Q 021216 259 SRELVREAL 267 (316)
Q Consensus 259 a~~l~~~a~ 267 (316)
++++.+.+.
T Consensus 184 ~~~i~~~~~ 192 (193)
T smart00331 184 AQRILEELL 192 (193)
T ss_pred HHHHHHHHh
Confidence 888877654
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.67 E-value=5.5e-15 Score=149.54 Aligned_cols=193 Identities=17% Similarity=0.116 Sum_probs=135.7
Q ss_pred cCCCCCCcccEEEecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 021216 29 IGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPICVEKAIKSAFVRADY 108 (316)
Q Consensus 29 ~G~r~~neD~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~~~~~~l~~a~~~~~~ 108 (316)
++.+..+.|.+.+.... ++..+++|+||+|.+..|..++..+.+.+.+......+ ...++..+|+
T Consensus 561 k~g~~vsGD~y~~~~l~-----------~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~----~~~ai~~lN~ 625 (764)
T TIGR02865 561 KDGELVSGDSYSFGKLS-----------AGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFD----REVAIKTVNS 625 (764)
T ss_pred CCCCcccCceEEEEEEC-----------CCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHH
Confidence 34456789998776543 45578999999998777777777776665432111111 2445566666
Q ss_pred HHHhcCCCCCCCCccEEEEEEe--CCeEEEEEeccccEEEEecCeeeeeCCCCCCCChhHHHHHHHcCCEEEcceecCce
Q 021216 109 AFADNSSLDISSGTTALTALIF--GRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYLNGQL 186 (316)
Q Consensus 109 ~l~~~~~~~~~~gtT~~~~~i~--~~~l~~a~vGDSr~yl~~~g~~~~lt~dh~~~~~~e~~ri~~~g~~~~~~~~~g~~ 186 (316)
.+.... ...+.+|+.+++++ .+++.++++|+++.|+.|++++.+++..+-
T Consensus 626 ~L~~~~--~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~l-------------------------- 677 (764)
T TIGR02865 626 ILSLRS--TDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNL-------------------------- 677 (764)
T ss_pred HHHhCC--CCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCc--------------------------
Confidence 665432 22478999999996 578999999999999999999888865442
Q ss_pred ecccccCCcccCCCCCCCCCCCCCCeeEEEEecCCCeEEEEEcCCccccCCHHH-----HHHHHHHHHhccCCHHHHHHH
Q 021216 187 SVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQG-----AVTVARKELMLHNDPERCSRE 261 (316)
Q Consensus 187 ~ltralG~~~~~~~~~~~~~v~~~p~i~~~~l~~~d~~lvL~SDGv~d~l~~~e-----i~~~i~~~~~~~~~~~~~a~~ 261 (316)
.+|-.. ..+++....++.++| +|+|+|||+||..++.+ +.+++... ...+|++.++.
T Consensus 678 ----PlGil~-----------~~~~~~~~~~L~~GD-~Lll~SDGv~E~~~~~~~~~~~l~~~l~~~--~~~~p~ela~~ 739 (764)
T TIGR02865 678 ----PIGILD-----------EVDVELVRKKLKNGD-LIVMVSDGVLEGEKEVEGKVLWLVRKLKET--NTNDPEEIAEY 739 (764)
T ss_pred ----eeEecc-----------CCccceEEEEeCCCC-EEEEECCCCCcCCcccccHHHHHHHHHHhc--CCCCHHHHHHH
Confidence 133211 235666777888887 78899999999887533 45555432 23579999999
Q ss_pred HHHHHHhCC---CCCceEEEEEEc
Q 021216 262 LVREALKRN---TCDNLTVIVICF 282 (316)
Q Consensus 262 l~~~a~~~~---~~DN~TvIvv~~ 282 (316)
|++.+.... ..||+|++++++
T Consensus 740 Il~~a~~~~~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 740 LLEKAKELRSGKIKDDMTVIVAKV 763 (764)
T ss_pred HHHHHHHhcCCCCCCCeEEEEEEe
Confidence 999997643 479999999976
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.57 E-value=4.8e-13 Score=113.90 Aligned_cols=178 Identities=21% Similarity=0.156 Sum_probs=112.6
Q ss_pred CCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEEe--CCeE
Q 021216 57 VPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPICVEKAIKSAFVRADYAFADNSSLDISSGTTALTALIF--GRNL 134 (316)
Q Consensus 57 ~~~~l~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~gtT~~~~~i~--~~~l 134 (316)
++.+++.|+|+.|-.-.|.+.+..+...+......... ....+..+|+.+....... ...+|++++.++ .+.+
T Consensus 2 ~~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~----p~~~l~~ln~~l~~~~~~~-~~~~t~~~~~~d~~~~~l 76 (193)
T PF07228_consen 2 DGRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLD----PEELLEALNRRLYRDLKGD-NRYATACYAIIDPETGTL 76 (193)
T ss_dssp TTEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS----HHHHHHHHHHHHHHHTTTT-STTEEEEEEEEETTTTEE
T ss_pred CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHhhhc-cccceEEEEEecccceEE
Confidence 56789999999996666666666555555432211111 3444445555553322221 367788888876 4589
Q ss_pred EEEEeccccEEEEec--CeeeeeCCCCCCCChhHHHHHHHcCCEEEcceecCceecccccCCcccCCCCCCCCCCCCCCe
Q 021216 135 IIANAGDCRAVLGRR--GRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYLNGQLSVARALGDWHMKSPKGSACPLSAEPE 212 (316)
Q Consensus 135 ~~a~vGDSr~yl~~~--g~~~~lt~dh~~~~~~e~~ri~~~g~~~~~~~~~g~~~ltralG~~~~~~~~~~~~~v~~~p~ 212 (316)
+++|+|+++++++++ +....+..... .+|-.. ...+.
T Consensus 77 ~~~~aG~~~~l~~~~~~~~~~~~~~~~~------------------------------~lG~~~-----------~~~~~ 115 (193)
T PF07228_consen 77 TYANAGHPPPLLLRPGGREIEQLESEGP------------------------------PLGIFE-----------DIDYQ 115 (193)
T ss_dssp EEEEESSSEEEEEETTCTEEEEETCSSB------------------------------BCSSSC-----------TTCEE
T ss_pred EEeCCCCCCEEEEeccccceeecccCcc------------------------------ceeeec-----------ccccc
Confidence 999999999999998 34444433221 245322 23445
Q ss_pred eEEEEecCCCeEEEEEcCCccccCCHH-------HHHHHHHHHHhccCCHHHHHHHHHHHHHhC---CCCCceEEEEEEc
Q 021216 213 LQETLLTEDDEFLIMGCDGLWDVMSSQ-------GAVTVARKELMLHNDPERCSRELVREALKR---NTCDNLTVIVICF 282 (316)
Q Consensus 213 i~~~~l~~~d~~lvL~SDGv~d~l~~~-------ei~~~i~~~~~~~~~~~~~a~~l~~~a~~~---~~~DN~TvIvv~~ 282 (316)
...+.+.++| .|+|+|||+++....+ ++.+.+... ...++++.++.+.+.+... ...||+|++++++
T Consensus 116 ~~~~~l~~gd-~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~~~~~~~~~DD~tvl~~~~ 192 (193)
T PF07228_consen 116 EQEIQLEPGD-RLLLYTDGLFEALNEDGEFFGEERLLELLDEN--RGLSPQEIIDALLEAIDRFGKGPLRDDITVLVIRR 192 (193)
T ss_dssp EEEEE--TTE-EEEEECHHHCTTTCHHCHHCCCHHHHHHHHCH--TTS-HHHHHHHHHHHHHHHTTSSTSS-EEEEEEEE
T ss_pred ceEEEecccc-EEEEeCCChhhccCCccchhHHHHHHHHHhhc--cCCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEEE
Confidence 5667777766 7889999999999543 234444432 2457899999999998763 4689999999987
Q ss_pred C
Q 021216 283 S 283 (316)
Q Consensus 283 ~ 283 (316)
+
T Consensus 193 ~ 193 (193)
T PF07228_consen 193 Q 193 (193)
T ss_dssp -
T ss_pred C
Confidence 4
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.55 E-value=1.5e-05 Score=74.84 Aligned_cols=175 Identities=16% Similarity=0.138 Sum_probs=112.2
Q ss_pred CceEEEEEcCCC-hhHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEEe--CCe
Q 021216 58 PGAFYGVFDGHG-GTDAALYVRANILRFIVEDSHF-PICVEKAIKSAFVRADYAFADNSSLDISSGTTALTALIF--GRN 133 (316)
Q Consensus 58 ~~~l~~V~DG~G-G~~~a~~a~~~~~~~l~~~~~~-~~~~~~~l~~a~~~~~~~l~~~~~~~~~~gtT~~~~~i~--~~~ 133 (316)
+...++|.|..| |-.+|-. +......+...... ..++. ..+..+|+.+....... +-+|+..++++ .+.
T Consensus 174 ~~~~i~I~DvsG~Gv~aal~-m~~~~~~~~~~~~~~~~~p~----~~l~~~n~~~~~~~~~~--~f~T~~~~~~d~~~~~ 246 (367)
T COG2208 174 KRLRIGIGDVSGKGVPAALL-MLMPKLALRLLLESGPLDPA----DVLETLNRVLKQNLEED--MFVTLFLGVYDLDSGE 246 (367)
T ss_pred cEEEEEEEeccCCCHHHHHH-HHHHHHHHHHhhhcccCCHH----HHHHHHHHHHHhcccCC--cEEEEEEEEEeccCCE
Confidence 567899999999 5555444 33332222221111 22233 33345555555444332 78888888886 568
Q ss_pred EEEEEeccccEEEEecCee---eeeCCCCCCCChhHHHHHHHcCCEEEcceecCceecccccCCcccCCCCCCCCCCCCC
Q 021216 134 LIIANAGDCRAVLGRRGRA---IEMSKDHKPNCTSERLRIEKLGGVVYDGYLNGQLSVARALGDWHMKSPKGSACPLSAE 210 (316)
Q Consensus 134 l~~a~vGDSr~yl~~~g~~---~~lt~dh~~~~~~e~~ri~~~g~~~~~~~~~g~~~ltralG~~~~~~~~~~~~~v~~~ 210 (316)
+.++++|---.++++.++. ..++ .....+|..+ ...
T Consensus 247 l~y~~aGH~p~~i~~~~~~~~~~~l~------------------------------~~g~piG~~~-----------~~~ 285 (367)
T COG2208 247 LTYSNAGHEPALILSADGEIEVEDLT------------------------------ALGLPIGLLP-----------DYQ 285 (367)
T ss_pred EEEeeCCCCCeeEEEcCCCceeEEcc------------------------------CCCceeeecC-----------Ccc
Confidence 9999999999998886543 2222 1234566543 445
Q ss_pred CeeEEEEecCCCeEEEEEcCCccc-------cCCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhC----CCCCceEEEE
Q 021216 211 PELQETLLTEDDEFLIMGCDGLWD-------VMSSQGAVTVARKELMLHNDPERCSRELVREALKR----NTCDNLTVIV 279 (316)
Q Consensus 211 p~i~~~~l~~~d~~lvL~SDGv~d-------~l~~~ei~~~i~~~~~~~~~~~~~a~~l~~~a~~~----~~~DN~TvIv 279 (316)
+.+....+.++| .++|.||||.+ .+..+....++.+. ...++++.++.+.+..... .-.||+|+++
T Consensus 286 ~~~~~~~l~~gd-~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~--~~~~~~e~~~~i~~~l~~~~~~~~~~DDiTll~ 362 (367)
T COG2208 286 YEVASLQLEPGD-LLVLYTDGVTEARNSDGEFFGLERLLKILGRL--LGQPAEEILEAILESLEELQGDQIQDDDITLLV 362 (367)
T ss_pred chheeEEecCCC-EEEEEcCCeeeeecCCccEecHHHHHHHHHHH--hCCCHHHHHHHHHHHHHHhhCCccccCceEEEE
Confidence 666777777755 88899999999 45666777777652 2467888888777776553 3468899999
Q ss_pred EEcC
Q 021216 280 ICFS 283 (316)
Q Consensus 280 v~~~ 283 (316)
+++.
T Consensus 363 lk~~ 366 (367)
T COG2208 363 LKVK 366 (367)
T ss_pred EEec
Confidence 9875
No 20
>PRK10693 response regulator of RpoS; Provisional
Probab=80.08 E-value=22 Score=32.34 Aligned_cols=93 Identities=11% Similarity=0.069 Sum_probs=49.2
Q ss_pred CCceEEEEEc--CCChhH-HHHHHHHHHHH-HHHhcCCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEEe--
Q 021216 57 VPGAFYGVFD--GHGGTD-AALYVRANILR-FIVEDSHFPICVEKAIKSAFVRADYAFADNSSLDISSGTTALTALIF-- 130 (316)
Q Consensus 57 ~~~~l~~V~D--G~GG~~-~a~~a~~~~~~-~l~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~gtT~~~~~i~-- 130 (316)
++...|-++| ||||+. .+......+.. .+.................+..+|+.+....... .-|+..++++
T Consensus 161 ~~~~~~~~~DvsGhg~hg~~aa~l~~~~~~~~~~~~~~~~~~~~~~p~~~l~~lN~~l~~~~~~~---~~t~~~~~~d~~ 237 (303)
T PRK10693 161 DNDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPG---QFPLLVGYYHRE 237 (303)
T ss_pred CCcEEEEEEecCCCCcccHHHHHHHHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHhcCCCc---eeeEEEEEEEcC
Confidence 3445566666 766554 33333444333 4433210000000013445567777776653221 2577777886
Q ss_pred CCeEEEEEeccccEEEEecCee
Q 021216 131 GRNLIIANAGDCRAVLGRRGRA 152 (316)
Q Consensus 131 ~~~l~~a~vGDSr~yl~~~g~~ 152 (316)
.+.+.+++.|-.-.++..++.+
T Consensus 238 ~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 238 LKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred CCeEEEEeCCCCCEEecCCeEE
Confidence 4589999999999885333333
No 21
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=58.41 E-value=14 Score=30.90 Aligned_cols=49 Identities=18% Similarity=0.354 Sum_probs=36.4
Q ss_pred CeEEEEEcCCcc-----------ccCCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhCC
Q 021216 222 DEFLIMGCDGLW-----------DVMSSQGAVTVARKELMLHNDPERCSRELVREALKRN 270 (316)
Q Consensus 222 d~~lvL~SDGv~-----------d~l~~~ei~~~i~~~~~~~~~~~~~a~~l~~~a~~~~ 270 (316)
|+.++..|.||| |+|.++...+.+.....+..=|.++|..|++.-..+|
T Consensus 71 DDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RG 130 (237)
T COG3700 71 DDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRG 130 (237)
T ss_pred CCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcC
Confidence 345667888777 5667777777777665566668999999999977765
No 22
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=50.81 E-value=6.5 Score=27.64 Aligned_cols=33 Identities=15% Similarity=0.274 Sum_probs=19.7
Q ss_pred CCCCCCeeEEEE-ecCCCeEEEEEcCCccccCCH
Q 021216 206 PLSAEPELQETL-LTEDDEFLIMGCDGLWDVMSS 238 (316)
Q Consensus 206 ~v~~~p~i~~~~-l~~~d~~lvL~SDGv~d~l~~ 238 (316)
+....|....+. +...++.+++++||+|=-+..
T Consensus 10 P~v~vPr~g~l~~l~~~G~Rllva~nGv~lEv~r 43 (72)
T PF09436_consen 10 PTVMVPRFGALEPLERPGHRLLVASNGVFLEVRR 43 (72)
T ss_pred CEeecCCCCCCCccccCCcEEEEecCcEEEEEec
Confidence 334455544443 343555677999999965543
No 23
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=27.76 E-value=38 Score=25.24 Aligned_cols=51 Identities=22% Similarity=0.348 Sum_probs=30.7
Q ss_pred ecCCCeEEEEEcCCccccCCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhCCCCCceE
Q 021216 218 LTEDDEFLIMGCDGLWDVMSSQGAVTVARKELMLHNDPERCSRELVREALKRNTCDNLT 276 (316)
Q Consensus 218 l~~~d~~lvL~SDGv~d~l~~~ei~~~i~~~~~~~~~~~~~a~~l~~~a~~~~~~DN~T 276 (316)
+.++| -++|+.|||+-.+...+...-+.. .|. .+=.|-+-..+||-.+.++
T Consensus 22 l~~~D-~vlL~qdGV~aAl~~~~~~~sl~~------~p~-~~~alkeDl~ARGl~~~~s 72 (96)
T COG2168 22 LTEGD-AVLLLQDGVYAALKGNRYLASLRE------SPI-KVYALKEDLLARGLTGQIS 72 (96)
T ss_pred hcccC-eEEEEcccchhhhcCcHHHHHHhc------Ccc-ceeeehhhHHhccchhhcC
Confidence 34666 455999999999988777665554 231 1222444455666544444
No 24
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=26.88 E-value=1.2e+02 Score=16.62 Aligned_cols=21 Identities=24% Similarity=0.300 Sum_probs=16.3
Q ss_pred EEEeCCeEEEEEeccccEEEE
Q 021216 127 ALIFGRNLIIANAGDCRAVLG 147 (316)
Q Consensus 127 ~~i~~~~l~~a~vGDSr~yl~ 147 (316)
++-.++.+|++-.|..|+..+
T Consensus 8 av~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 8 AVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEETTSEEEEEECCCTEEEEE
T ss_pred EEeCCCCEEEEECCCCEEEEC
Confidence 344788999999999888754
No 25
>PF06972 DUF1296: Protein of unknown function (DUF1296); InterPro: IPR009719 This family represents a conserved region approximately 60 residues long within a number of plant proteins of unknown function.
Probab=26.49 E-value=1.2e+02 Score=20.41 Aligned_cols=27 Identities=15% Similarity=0.289 Sum_probs=22.6
Q ss_pred CCHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 021216 236 MSSQGAVTVARKELMLHNDPERCSRELVRE 265 (316)
Q Consensus 236 l~~~ei~~~i~~~~~~~~~~~~~a~~l~~~ 265 (316)
.++++|..++... ..+|.++++.|+.+
T Consensus 19 hse~eIya~L~ec---nMDpnea~qrLL~q 45 (60)
T PF06972_consen 19 HSEEEIYAMLKEC---NMDPNEAVQRLLSQ 45 (60)
T ss_pred CCHHHHHHHHHHh---CCCHHHHHHHHHhc
Confidence 5788999888876 78999999998863
Done!