Query 021218
Match_columns 316
No_of_seqs 321 out of 2068
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 14:28:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021218.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021218hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fr7_A Putative ketol-acid red 100.0 1.7E-51 5.7E-56 411.8 16.8 247 68-314 11-257 (525)
2 3ulk_A Ketol-acid reductoisome 100.0 8.5E-45 2.9E-49 358.6 18.5 220 71-314 2-230 (491)
3 1np3_A Ketol-acid reductoisome 100.0 2.9E-28 1E-32 233.0 14.9 189 106-314 12-203 (338)
4 3ggo_A Prephenate dehydrogenas 99.8 5.4E-20 1.8E-24 174.4 14.5 169 112-297 34-208 (314)
5 3tri_A Pyrroline-5-carboxylate 99.8 5.8E-20 2E-24 171.1 14.0 156 112-295 4-164 (280)
6 3ktd_A Prephenate dehydrogenas 99.8 1.4E-19 4.8E-24 174.2 12.2 171 112-298 9-191 (341)
7 3gt0_A Pyrroline-5-carboxylate 99.8 2.2E-19 7.7E-24 162.9 11.5 154 112-293 3-161 (247)
8 3b1f_A Putative prephenate deh 99.7 3.2E-17 1.1E-21 151.1 13.5 168 111-297 6-184 (290)
9 2g5c_A Prephenate dehydrogenas 99.7 3.9E-17 1.3E-21 149.9 13.9 170 111-297 1-176 (281)
10 2izz_A Pyrroline-5-carboxylate 99.7 1.8E-16 6.3E-21 149.7 13.5 152 112-287 23-181 (322)
11 3c24_A Putative oxidoreductase 99.7 1.2E-15 4E-20 141.0 17.2 162 111-297 11-187 (286)
12 2rcy_A Pyrroline carboxylate r 99.7 4.7E-16 1.6E-20 140.8 13.9 148 112-294 5-156 (262)
13 1ygy_A PGDH, D-3-phosphoglycer 99.7 3.4E-17 1.2E-21 165.4 6.6 176 85-288 117-308 (529)
14 2ekl_A D-3-phosphoglycerate de 99.7 3E-16 1E-20 148.9 11.4 167 85-277 119-295 (313)
15 3dtt_A NADP oxidoreductase; st 99.7 6.6E-16 2.3E-20 140.4 13.2 162 105-289 14-208 (245)
16 2pv7_A T-protein [includes: ch 99.7 1.1E-15 3.9E-20 142.8 14.4 147 112-297 22-169 (298)
17 2f1k_A Prephenate dehydrogenas 99.6 4.8E-15 1.6E-19 135.6 16.0 170 112-297 1-170 (279)
18 2g76_A 3-PGDH, D-3-phosphoglyc 99.6 7.3E-16 2.5E-20 148.0 11.0 164 85-276 140-314 (335)
19 1wwk_A Phosphoglycerate dehydr 99.6 8.2E-16 2.8E-20 145.5 11.1 166 85-277 117-293 (307)
20 1gdh_A D-glycerate dehydrogena 99.6 6.1E-16 2.1E-20 147.2 8.0 166 85-277 118-298 (320)
21 2ahr_A Putative pyrroline carb 99.6 2.8E-15 9.6E-20 135.9 11.8 152 111-294 3-155 (259)
22 2dpo_A L-gulonate 3-dehydrogen 99.6 1.1E-14 3.8E-19 138.7 16.0 153 111-287 6-182 (319)
23 1yqg_A Pyrroline-5-carboxylate 99.6 3.2E-15 1.1E-19 135.4 10.5 146 112-287 1-148 (263)
24 4hy3_A Phosphoglycerate oxidor 99.6 4.8E-15 1.6E-19 144.0 12.3 164 85-276 148-325 (365)
25 4huj_A Uncharacterized protein 99.6 7.2E-15 2.5E-19 131.5 12.4 176 94-293 7-198 (220)
26 3gg9_A D-3-phosphoglycerate de 99.6 3.6E-15 1.2E-19 144.1 11.2 165 85-275 125-310 (352)
27 3gvx_A Glycerate dehydrogenase 99.6 7E-16 2.4E-20 145.5 5.3 158 86-277 100-268 (290)
28 4e12_A Diketoreductase; oxidor 99.6 2.1E-14 7.4E-19 133.0 14.8 154 111-288 4-181 (283)
29 4g2n_A D-isomer specific 2-hyd 99.6 4.7E-15 1.6E-19 143.0 10.5 165 85-277 145-323 (345)
30 2pi1_A D-lactate dehydrogenase 99.6 4.3E-15 1.5E-19 142.5 9.1 111 86-212 116-230 (334)
31 3jtm_A Formate dehydrogenase, 99.6 3E-15 1E-19 144.6 7.9 166 86-276 138-316 (351)
32 4dgs_A Dehydrogenase; structur 99.6 1.5E-14 5.1E-19 139.3 12.6 162 85-277 144-318 (340)
33 4e5n_A Thermostable phosphite 99.6 5.6E-15 1.9E-19 141.4 9.6 166 86-277 119-304 (330)
34 1qp8_A Formate dehydrogenase; 99.6 1.2E-14 4E-19 137.6 11.2 160 86-275 101-272 (303)
35 2cuk_A Glycerate dehydrogenase 99.6 9.9E-15 3.4E-19 138.4 10.2 159 85-276 116-288 (311)
36 2j6i_A Formate dehydrogenase; 99.5 1.3E-14 4.3E-19 140.6 9.9 170 85-274 137-320 (364)
37 2nac_A NAD-dependent formate d 99.5 5.8E-15 2E-19 144.7 7.6 166 85-275 164-342 (393)
38 1sc6_A PGDH, D-3-phosphoglycer 99.5 1.5E-14 5.2E-19 142.0 9.8 164 85-275 120-296 (404)
39 3k5p_A D-3-phosphoglycerate de 99.5 1.2E-14 4E-19 143.5 8.6 166 85-276 131-308 (416)
40 1f0y_A HCDH, L-3-hydroxyacyl-C 99.5 2.1E-13 7.1E-18 127.0 16.4 153 111-287 15-195 (302)
41 3dfu_A Uncharacterized protein 99.5 3.6E-14 1.2E-18 130.2 10.9 131 112-299 7-138 (232)
42 3evt_A Phosphoglycerate dehydr 99.5 5.3E-15 1.8E-19 141.4 5.5 151 90-267 118-277 (324)
43 3pp8_A Glyoxylate/hydroxypyruv 99.5 3.7E-15 1.3E-19 141.9 4.1 154 86-267 117-279 (315)
44 3hg7_A D-isomer specific 2-hyd 99.5 4.1E-15 1.4E-19 142.3 4.2 155 85-267 117-280 (324)
45 3ba1_A HPPR, hydroxyphenylpyru 99.5 2.6E-14 8.9E-19 137.0 9.3 161 85-276 138-310 (333)
46 1mx3_A CTBP1, C-terminal bindi 99.5 3.4E-14 1.1E-18 137.0 9.7 166 85-276 136-320 (347)
47 2yq5_A D-isomer specific 2-hyd 99.5 2.9E-14 1E-18 137.4 9.1 165 86-276 122-309 (343)
48 3qsg_A NAD-binding phosphogluc 99.5 7.4E-14 2.5E-18 131.4 11.4 150 111-287 24-178 (312)
49 2dbq_A Glyoxylate reductase; D 99.5 4.4E-14 1.5E-18 134.9 9.8 162 86-275 119-298 (334)
50 2h78_A Hibadh, 3-hydroxyisobut 99.5 1.8E-13 6.2E-18 126.8 12.0 152 111-290 3-162 (302)
51 1j4a_A D-LDH, D-lactate dehydr 99.5 1.1E-13 3.9E-18 132.2 10.7 166 85-275 121-307 (333)
52 2w2k_A D-mandelate dehydrogena 99.5 6.9E-14 2.4E-18 134.4 9.1 117 85-214 131-258 (348)
53 3k6j_A Protein F01G10.3, confi 99.5 1.4E-12 4.7E-17 130.3 18.1 156 110-289 53-227 (460)
54 2gcg_A Glyoxylate reductase/hy 99.5 1.9E-13 6.5E-18 130.2 11.2 159 85-269 127-298 (330)
55 1xdw_A NAD+-dependent (R)-2-hy 99.5 1.1E-13 3.8E-18 132.1 9.5 168 85-277 120-309 (331)
56 3d1l_A Putative NADP oxidoredu 99.5 9.3E-13 3.2E-17 119.7 15.2 161 107-295 7-169 (266)
57 1jay_A Coenzyme F420H2:NADP+ o 99.4 4E-13 1.4E-17 117.9 11.2 153 112-289 1-177 (212)
58 3mog_A Probable 3-hydroxybutyr 99.4 1E-12 3.4E-17 131.7 15.2 153 112-289 6-181 (483)
59 1zej_A HBD-9, 3-hydroxyacyl-CO 99.4 1.3E-12 4.3E-17 123.4 14.8 144 112-287 13-166 (293)
60 3pef_A 6-phosphogluconate dehy 99.4 3.4E-13 1.2E-17 124.5 10.4 151 112-287 2-157 (287)
61 3doj_A AT3G25530, dehydrogenas 99.4 4.9E-13 1.7E-17 125.4 11.2 152 111-287 21-177 (310)
62 2d0i_A Dehydrogenase; structur 99.4 2.3E-13 7.9E-18 130.0 8.9 112 85-212 115-235 (333)
63 3obb_A Probable 3-hydroxyisobu 99.4 1.4E-12 4.7E-17 123.0 12.5 150 111-287 3-159 (300)
64 3g0o_A 3-hydroxyisobutyrate de 99.4 7.8E-13 2.7E-17 123.3 10.5 150 112-287 8-164 (303)
65 3pdu_A 3-hydroxyisobutyrate de 99.4 5.6E-13 1.9E-17 123.1 9.3 152 111-287 1-157 (287)
66 2ew2_A 2-dehydropantoate 2-red 99.4 2.8E-12 9.5E-17 117.8 13.8 159 111-290 3-180 (316)
67 3kb6_A D-lactate dehydrogenase 99.4 3.4E-13 1.2E-17 129.2 8.0 135 86-237 116-261 (334)
68 1dxy_A D-2-hydroxyisocaproate 99.4 2.7E-13 9.1E-18 129.7 6.1 111 85-212 119-233 (333)
69 2yjz_A Metalloreductase steap4 99.1 4.3E-14 1.5E-18 125.8 0.0 152 108-288 17-177 (201)
70 3l6d_A Putative oxidoreductase 99.3 2.8E-12 9.6E-17 120.2 10.2 155 108-292 7-167 (306)
71 4ezb_A Uncharacterized conserv 99.3 4.5E-12 1.6E-16 119.7 11.6 144 112-287 25-180 (317)
72 3qha_A Putative oxidoreductase 99.3 6.8E-12 2.3E-16 116.9 12.0 149 112-288 16-168 (296)
73 1txg_A Glycerol-3-phosphate de 99.3 8.6E-12 2.9E-16 116.2 12.7 157 112-288 1-176 (335)
74 4e21_A 6-phosphogluconate dehy 99.3 1.8E-11 6E-16 118.3 14.7 150 108-286 20-175 (358)
75 4dll_A 2-hydroxy-3-oxopropiona 99.3 1.2E-11 4.2E-16 116.5 13.3 149 108-284 29-183 (320)
76 2gf2_A Hibadh, 3-hydroxyisobut 99.3 2.9E-12 9.9E-17 117.9 8.2 152 112-288 1-157 (296)
77 1evy_A Glycerol-3-phosphate de 99.3 3.9E-12 1.3E-16 121.1 8.6 146 112-284 16-188 (366)
78 2zyd_A 6-phosphogluconate dehy 99.3 8.5E-12 2.9E-16 124.7 11.4 148 112-287 16-174 (480)
79 2raf_A Putative dinucleotide-b 99.3 1.5E-11 5.1E-16 109.4 11.1 147 105-294 14-177 (209)
80 1yj8_A Glycerol-3-phosphate de 99.3 1.7E-11 5.8E-16 117.5 12.2 150 111-287 21-209 (375)
81 1wdk_A Fatty oxidation complex 99.3 4.2E-11 1.4E-15 125.0 15.3 154 111-289 314-490 (715)
82 1x0v_A GPD-C, GPDH-C, glycerol 99.3 3.1E-11 1.1E-15 113.8 13.1 149 112-287 9-192 (354)
83 1vpd_A Tartronate semialdehyde 99.3 1.3E-11 4.6E-16 113.5 9.6 148 112-287 6-161 (299)
84 1yb4_A Tartronic semialdehyde 99.3 2.2E-11 7.6E-16 111.7 10.7 148 111-287 3-158 (295)
85 4gbj_A 6-phosphogluconate dehy 99.2 4.6E-12 1.6E-16 119.0 5.9 149 112-287 6-159 (297)
86 2p4q_A 6-phosphogluconate dehy 99.2 8.1E-12 2.8E-16 125.5 8.0 147 112-287 11-170 (497)
87 3cky_A 2-hydroxymethyl glutara 99.2 5E-11 1.7E-15 109.8 12.2 149 112-288 5-161 (301)
88 2i76_A Hypothetical protein; N 99.2 3E-12 1E-16 118.0 4.0 152 112-301 3-161 (276)
89 2iz1_A 6-phosphogluconate dehy 99.2 4.3E-11 1.5E-15 119.1 12.5 148 112-287 6-164 (474)
90 3k96_A Glycerol-3-phosphate de 99.2 4E-11 1.4E-15 115.5 11.7 153 112-287 30-199 (356)
91 1zcj_A Peroxisomal bifunctiona 99.2 1.7E-10 5.7E-15 114.7 16.3 152 111-287 37-209 (463)
92 2uyy_A N-PAC protein; long-cha 99.2 2.2E-11 7.5E-16 113.5 9.4 148 112-287 31-186 (316)
93 4gwg_A 6-phosphogluconate dehy 99.2 6.7E-11 2.3E-15 118.7 13.5 153 111-287 4-164 (484)
94 2vns_A Metalloreductase steap3 99.2 3.7E-11 1.3E-15 107.1 10.0 152 112-290 29-191 (215)
95 2cvz_A Dehydrogenase, 3-hydrox 99.2 1.6E-11 5.6E-16 112.0 7.4 146 111-287 1-151 (289)
96 2o4c_A Erythronate-4-phosphate 99.2 7.3E-12 2.5E-16 122.3 4.5 151 106-287 112-281 (380)
97 2pgd_A 6-phosphogluconate dehy 99.2 2.5E-11 8.4E-16 121.1 7.9 147 112-287 3-162 (482)
98 1i36_A Conserved hypothetical 99.2 1.2E-10 4.1E-15 105.5 11.4 90 112-215 1-91 (264)
99 2qyt_A 2-dehydropantoate 2-red 99.2 6.9E-11 2.4E-15 109.1 9.4 166 112-289 9-189 (317)
100 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.2 9.8E-11 3.3E-15 116.8 10.9 148 112-287 2-164 (478)
101 3oet_A Erythronate-4-phosphate 99.2 1.9E-11 6.6E-16 119.4 5.6 150 106-286 115-283 (381)
102 1z82_A Glycerol-3-phosphate de 99.1 9.8E-11 3.4E-15 110.4 9.9 144 112-287 15-174 (335)
103 2wtb_A MFP2, fatty acid multif 99.1 6.4E-10 2.2E-14 116.3 16.0 152 111-287 312-486 (725)
104 3hn2_A 2-dehydropantoate 2-red 99.1 6.6E-10 2.3E-14 104.0 13.4 153 112-288 3-173 (312)
105 1ks9_A KPA reductase;, 2-dehyd 99.1 1.9E-10 6.5E-15 104.5 8.5 153 112-291 1-166 (291)
106 3ado_A Lambda-crystallin; L-gu 99.0 6.9E-09 2.4E-13 99.0 15.7 153 112-288 7-183 (319)
107 3i83_A 2-dehydropantoate 2-red 99.0 2.8E-09 9.7E-14 100.0 12.3 154 112-288 3-175 (320)
108 1mv8_A GMD, GDP-mannose 6-dehy 99.0 6.3E-09 2.1E-13 102.1 14.8 159 112-294 1-203 (436)
109 1v8b_A Adenosylhomocysteinase; 99.0 3.4E-10 1.1E-14 113.6 5.4 112 85-215 235-347 (479)
110 1bg6_A N-(1-D-carboxylethyl)-L 98.9 4.3E-09 1.5E-13 98.6 11.3 95 112-213 5-110 (359)
111 3d4o_A Dipicolinate synthase s 98.9 2.7E-09 9.4E-14 99.3 9.8 95 105-212 150-244 (293)
112 2rir_A Dipicolinate synthase, 98.9 1.8E-09 6.3E-14 100.7 8.2 95 105-212 152-246 (300)
113 2q3e_A UDP-glucose 6-dehydroge 98.9 5E-09 1.7E-13 103.9 11.4 165 111-295 5-215 (467)
114 3d64_A Adenosylhomocysteinase; 98.9 1.5E-09 5.1E-14 109.3 6.6 110 86-214 256-366 (494)
115 3ghy_A Ketopantoate reductase 98.9 8.5E-09 2.9E-13 97.4 11.1 94 112-214 4-107 (335)
116 3hwr_A 2-dehydropantoate 2-red 98.9 1.1E-08 3.6E-13 96.2 11.5 105 107-221 16-131 (318)
117 3gg2_A Sugar dehydrogenase, UD 98.9 7.7E-09 2.6E-13 102.5 10.6 162 112-294 3-205 (450)
118 2o3j_A UDP-glucose 6-dehydroge 98.8 8.1E-09 2.8E-13 103.0 10.3 164 112-294 10-220 (481)
119 3h9u_A Adenosylhomocysteinase; 98.8 7E-09 2.4E-13 102.9 7.8 93 105-213 206-299 (436)
120 3n58_A Adenosylhomocysteinase; 98.8 1.3E-08 4.3E-13 101.5 9.1 93 106-214 243-336 (464)
121 2hk9_A Shikimate dehydrogenase 98.8 4E-09 1.4E-13 97.5 4.2 94 107-213 126-222 (275)
122 3c7a_A Octopine dehydrogenase; 98.7 1.7E-08 5.9E-13 97.2 8.3 95 111-211 2-115 (404)
123 3gvp_A Adenosylhomocysteinase 98.7 1.5E-08 5.3E-13 100.3 7.0 92 106-213 216-308 (435)
124 3pid_A UDP-glucose 6-dehydroge 98.7 3.8E-08 1.3E-12 97.5 9.6 96 106-215 32-156 (432)
125 1dlj_A UDP-glucose dehydrogena 98.7 2.3E-07 8E-12 90.2 15.0 94 112-214 1-119 (402)
126 4a7p_A UDP-glucose dehydrogena 98.7 6.6E-08 2.3E-12 96.0 10.9 153 110-287 7-199 (446)
127 2y0c_A BCEC, UDP-glucose dehyd 98.7 5.2E-08 1.8E-12 97.3 9.6 98 110-214 7-130 (478)
128 1y81_A Conserved hypothetical 98.7 5.5E-08 1.9E-12 81.8 7.9 110 112-243 15-128 (138)
129 3ego_A Probable 2-dehydropanto 98.6 9.3E-08 3.2E-12 89.5 9.6 112 112-236 3-121 (307)
130 3zwc_A Peroxisomal bifunctiona 98.6 5.3E-07 1.8E-11 94.7 16.2 156 110-289 315-490 (742)
131 1lss_A TRK system potassium up 98.6 3.2E-07 1.1E-11 73.8 11.5 95 112-213 5-104 (140)
132 3oj0_A Glutr, glutamyl-tRNA re 98.6 1.1E-08 3.6E-13 85.0 2.5 91 109-212 20-110 (144)
133 3ojo_A CAP5O; rossmann fold, c 98.6 4.1E-07 1.4E-11 90.0 13.7 162 109-294 10-208 (431)
134 3ce6_A Adenosylhomocysteinase; 98.6 1E-07 3.4E-12 96.0 9.1 92 107-214 271-363 (494)
135 2d5c_A AROE, shikimate 5-dehyd 98.6 3.4E-08 1.2E-12 90.2 5.0 90 107-212 114-206 (263)
136 2i99_A MU-crystallin homolog; 98.6 8.7E-08 3E-12 90.2 7.1 93 109-215 134-229 (312)
137 2duw_A Putative COA-binding pr 98.5 1.9E-07 6.5E-12 78.9 6.9 111 112-243 14-129 (145)
138 3p2y_A Alanine dehydrogenase/p 98.5 1.9E-07 6.5E-12 91.2 7.4 98 107-212 181-302 (381)
139 3g17_A Similar to 2-dehydropan 98.5 1.3E-08 4.5E-13 94.3 -1.1 97 112-216 3-101 (294)
140 3g79_A NDP-N-acetyl-D-galactos 98.4 6.4E-07 2.2E-11 89.7 10.6 162 111-294 18-228 (478)
141 2vhw_A Alanine dehydrogenase; 98.4 1.6E-07 5.4E-12 90.8 5.6 99 106-212 164-268 (377)
142 4dio_A NAD(P) transhydrogenase 98.3 5.7E-07 1.9E-11 88.5 6.9 98 107-212 187-312 (405)
143 2dc1_A L-aspartate dehydrogena 98.3 1E-06 3.5E-11 79.0 7.9 80 112-212 1-81 (236)
144 1hyh_A L-hicdh, L-2-hydroxyiso 98.3 2.2E-06 7.6E-11 80.0 9.3 70 111-190 1-81 (309)
145 1x13_A NAD(P) transhydrogenase 98.3 1.2E-06 4E-11 85.6 7.1 98 107-212 169-292 (401)
146 2g1u_A Hypothetical protein TM 98.2 3.8E-06 1.3E-10 70.2 9.2 102 104-213 13-120 (155)
147 3euw_A MYO-inositol dehydrogen 98.2 3.6E-06 1.2E-10 79.1 9.3 81 112-201 5-88 (344)
148 3uuw_A Putative oxidoreductase 98.2 2.1E-06 7.1E-11 79.5 7.5 80 112-200 7-88 (308)
149 1x7d_A Ornithine cyclodeaminas 98.2 1.2E-06 4.2E-11 84.1 5.7 96 109-214 128-228 (350)
150 4hkt_A Inositol 2-dehydrogenas 98.2 3.4E-06 1.2E-10 78.8 8.6 79 112-200 4-85 (331)
151 3llv_A Exopolyphosphatase-rela 98.2 1.2E-05 4.1E-10 65.6 10.9 93 112-211 7-103 (141)
152 1l7d_A Nicotinamide nucleotide 98.2 3.3E-06 1.1E-10 81.5 8.6 99 106-212 168-294 (384)
153 3fwz_A Inner membrane protein 98.2 1.1E-05 3.7E-10 66.5 10.2 87 112-205 8-98 (140)
154 2hmt_A YUAA protein; RCK, KTN, 98.2 8.1E-06 2.8E-10 65.6 9.0 99 107-213 3-106 (144)
155 3e9m_A Oxidoreductase, GFO/IDH 98.2 5E-06 1.7E-10 78.0 8.8 81 112-200 6-89 (330)
156 3hdj_A Probable ornithine cycl 98.1 3E-06 1E-10 80.3 7.1 90 112-215 122-216 (313)
157 3q2i_A Dehydrogenase; rossmann 98.1 4.8E-06 1.6E-10 78.7 8.4 81 112-200 14-97 (354)
158 3c85_A Putative glutathione-re 98.1 2E-05 6.8E-10 67.2 10.9 93 106-205 35-132 (183)
159 3ezy_A Dehydrogenase; structur 98.1 4E-06 1.4E-10 78.9 6.9 81 112-200 3-86 (344)
160 2ho3_A Oxidoreductase, GFO/IDH 98.1 6.3E-06 2.1E-10 76.8 8.2 89 111-210 1-92 (325)
161 1gpj_A Glutamyl-tRNA reductase 98.1 6.6E-06 2.3E-10 80.0 8.5 76 107-191 164-240 (404)
162 4fgw_A Glycerol-3-phosphate de 98.1 5.9E-06 2E-10 80.9 8.1 97 112-214 35-154 (391)
163 3mz0_A Inositol 2-dehydrogenas 98.1 7.3E-06 2.5E-10 77.1 8.4 82 112-200 3-88 (344)
164 2eez_A Alanine dehydrogenase; 98.1 4.6E-06 1.6E-10 80.0 7.2 100 106-213 162-267 (369)
165 2d59_A Hypothetical protein PH 98.1 2E-05 6.7E-10 66.3 9.8 115 112-248 23-141 (144)
166 2glx_A 1,5-anhydro-D-fructose 98.0 1.2E-05 3.9E-10 74.9 8.8 86 112-209 1-90 (332)
167 3ic5_A Putative saccharopine d 98.0 3.3E-05 1.1E-09 60.0 10.0 92 112-213 6-101 (118)
168 3l4b_C TRKA K+ channel protien 98.0 2E-05 7E-10 69.2 9.7 94 112-211 1-99 (218)
169 1a5z_A L-lactate dehydrogenase 98.0 1.5E-05 5.2E-10 75.0 9.1 89 112-211 1-115 (319)
170 3db2_A Putative NADPH-dependen 98.0 9.8E-06 3.4E-10 76.5 7.5 80 112-200 6-88 (354)
171 3e18_A Oxidoreductase; dehydro 98.0 1.8E-05 6E-10 75.3 9.2 86 112-209 6-93 (359)
172 1tlt_A Putative oxidoreductase 98.0 2.1E-05 7.4E-10 73.0 9.6 87 112-210 6-95 (319)
173 3vtf_A UDP-glucose 6-dehydroge 98.0 6.3E-05 2.1E-09 74.7 13.3 159 111-295 21-222 (444)
174 3evn_A Oxidoreductase, GFO/IDH 98.0 1.3E-05 4.5E-10 75.0 8.0 87 112-209 6-95 (329)
175 3ond_A Adenosylhomocysteinase; 98.0 1.5E-05 5.3E-10 80.0 9.0 93 106-214 261-354 (488)
176 2egg_A AROE, shikimate 5-dehyd 98.0 4.6E-06 1.6E-10 78.1 4.5 95 107-212 138-240 (297)
177 1xea_A Oxidoreductase, GFO/IDH 98.0 1.4E-05 4.8E-10 74.5 7.7 88 112-210 3-93 (323)
178 1lld_A L-lactate dehydrogenase 98.0 2.1E-05 7.1E-10 73.0 8.7 97 112-215 8-128 (319)
179 3ec7_A Putative dehydrogenase; 97.9 2.3E-05 7.8E-10 74.5 9.0 81 112-200 24-109 (357)
180 1omo_A Alanine dehydrogenase; 97.9 8.7E-06 3E-10 77.0 6.0 94 109-215 124-220 (322)
181 3cea_A MYO-inositol 2-dehydrog 97.9 3.7E-05 1.2E-09 71.9 9.7 87 112-209 9-99 (346)
182 3rc1_A Sugar 3-ketoreductase; 97.9 2E-05 6.7E-10 74.7 7.9 80 112-200 28-111 (350)
183 1iuk_A Hypothetical protein TT 97.9 3.2E-05 1.1E-09 64.8 8.2 117 112-248 14-134 (140)
184 3don_A Shikimate dehydrogenase 97.9 2.5E-06 8.4E-11 79.7 1.3 96 106-212 113-210 (277)
185 3u62_A Shikimate dehydrogenase 97.9 1.3E-06 4.6E-11 80.3 -0.6 100 107-220 106-208 (253)
186 2ewd_A Lactate dehydrogenase,; 97.9 5.8E-05 2E-09 70.7 10.0 90 112-211 5-120 (317)
187 3c1a_A Putative oxidoreductase 97.8 1.3E-05 4.5E-10 74.5 5.3 86 112-210 11-99 (315)
188 3bio_A Oxidoreductase, GFO/IDH 97.8 5E-05 1.7E-09 71.0 9.0 86 112-211 10-95 (304)
189 2nu8_A Succinyl-COA ligase [AD 97.8 4.2E-05 1.5E-09 71.4 8.4 92 112-217 8-102 (288)
190 1leh_A Leucine dehydrogenase; 97.8 2.4E-05 8.3E-10 75.7 6.8 71 107-189 170-241 (364)
191 3ohs_X Trans-1,2-dihydrobenzen 97.8 3.2E-05 1.1E-09 72.4 7.3 89 112-209 3-94 (334)
192 1ydw_A AX110P-like protein; st 97.8 6.6E-05 2.3E-09 71.0 9.0 90 112-209 7-99 (362)
193 4had_A Probable oxidoreductase 97.8 5.9E-05 2E-09 70.7 8.3 86 108-201 20-109 (350)
194 1f06_A MESO-diaminopimelate D- 97.8 2.8E-05 9.6E-10 73.2 6.0 85 112-211 4-88 (320)
195 2fp4_A Succinyl-COA ligase [GD 97.7 6.2E-05 2.1E-09 71.1 8.2 118 108-244 11-136 (305)
196 1oi7_A Succinyl-COA synthetase 97.7 5.7E-05 1.9E-09 70.6 7.9 91 112-216 8-101 (288)
197 2v6b_A L-LDH, L-lactate dehydr 97.7 7.3E-05 2.5E-09 69.9 8.6 92 112-211 1-115 (304)
198 3o8q_A Shikimate 5-dehydrogena 97.7 9.4E-06 3.2E-10 75.8 2.2 94 106-212 122-221 (281)
199 1id1_A Putative potassium chan 97.7 0.00024 8.2E-09 58.9 10.6 96 112-213 4-107 (153)
200 2p2s_A Putative oxidoreductase 97.7 0.00019 6.5E-09 67.1 11.1 87 112-210 5-96 (336)
201 3qy9_A DHPR, dihydrodipicolina 97.7 0.00014 4.7E-09 66.7 9.7 152 111-287 3-163 (243)
202 2z2v_A Hypothetical protein PH 97.7 3.2E-05 1.1E-09 74.5 5.7 94 109-213 15-109 (365)
203 2aef_A Calcium-gated potassium 97.7 0.00015 5.1E-09 64.2 8.9 94 112-214 10-108 (234)
204 3o9z_A Lipopolysaccaride biosy 97.6 0.00014 4.8E-09 68.0 8.7 87 111-209 3-100 (312)
205 3moi_A Probable dehydrogenase; 97.6 6.9E-05 2.4E-09 71.8 6.6 80 112-200 3-86 (387)
206 1pzg_A LDH, lactate dehydrogen 97.6 0.00024 8.1E-09 67.4 10.2 93 112-211 10-131 (331)
207 2hjr_A Malate dehydrogenase; m 97.6 0.0004 1.4E-08 65.8 11.5 89 112-211 15-130 (328)
208 1nyt_A Shikimate 5-dehydrogena 97.6 5.6E-05 1.9E-09 69.4 5.4 94 107-212 116-214 (271)
209 3oa2_A WBPB; oxidoreductase, s 97.6 0.00016 5.5E-09 67.8 8.6 82 111-201 3-96 (318)
210 1c1d_A L-phenylalanine dehydro 97.6 0.00011 3.9E-09 70.9 7.5 89 106-212 171-261 (355)
211 3pwz_A Shikimate dehydrogenase 97.6 4.3E-05 1.5E-09 71.0 4.2 94 106-212 116-215 (272)
212 3phh_A Shikimate dehydrogenase 97.6 2.8E-05 9.5E-10 72.4 2.8 91 108-212 116-209 (269)
213 1guz_A Malate dehydrogenase; o 97.6 0.00042 1.5E-08 64.8 10.8 72 112-188 1-79 (310)
214 1p77_A Shikimate 5-dehydrogena 97.5 2.4E-05 8.1E-10 72.0 2.1 75 107-192 116-194 (272)
215 4fb5_A Probable oxidoreductase 97.5 0.00017 5.7E-09 67.7 7.9 89 108-200 20-116 (393)
216 3ngx_A Bifunctional protein fo 97.5 0.00016 5.4E-09 67.8 7.5 74 108-212 148-222 (276)
217 1h6d_A Precursor form of gluco 97.5 0.00012 4.1E-09 71.6 7.0 84 112-200 84-172 (433)
218 3dty_A Oxidoreductase, GFO/IDH 97.5 0.00014 4.8E-09 69.9 7.4 82 112-200 13-107 (398)
219 3l07_A Bifunctional protein fo 97.5 0.00019 6.4E-09 67.6 8.0 76 106-212 157-233 (285)
220 3p2o_A Bifunctional protein fo 97.5 0.00019 6.4E-09 67.6 7.9 77 106-213 156-233 (285)
221 4h3v_A Oxidoreductase domain p 97.5 0.00015 5E-09 68.0 7.2 90 113-209 8-103 (390)
222 1edz_A 5,10-methylenetetrahydr 97.5 2.3E-05 8E-10 74.8 1.4 96 107-213 174-276 (320)
223 2czc_A Glyceraldehyde-3-phosph 97.5 0.00031 1.1E-08 66.6 9.1 93 112-212 3-110 (334)
224 4a26_A Putative C-1-tetrahydro 97.5 0.00015 5.2E-09 68.7 6.9 77 106-213 161-240 (300)
225 1ldn_A L-lactate dehydrogenase 97.5 0.00026 8.8E-09 66.7 8.3 71 112-190 7-86 (316)
226 3i23_A Oxidoreductase, GFO/IDH 97.5 0.00029 9.8E-09 66.5 8.6 85 112-209 3-93 (349)
227 4a5o_A Bifunctional protein fo 97.4 0.00025 8.6E-09 66.7 7.6 77 106-213 157-234 (286)
228 3m2t_A Probable dehydrogenase; 97.4 0.00017 5.8E-09 68.5 6.5 81 112-200 6-90 (359)
229 1nvm_B Acetaldehyde dehydrogen 97.4 0.00041 1.4E-08 65.5 9.0 94 112-213 5-105 (312)
230 1t2d_A LDH-P, L-lactate dehydr 97.4 0.0011 3.8E-08 62.6 11.9 65 112-186 5-80 (322)
231 1a4i_A Methylenetetrahydrofola 97.4 0.00036 1.2E-08 66.1 8.3 77 106-213 161-238 (301)
232 1b0a_A Protein (fold bifunctio 97.4 0.00027 9.1E-09 66.6 7.2 77 106-213 155-232 (288)
233 3v5n_A Oxidoreductase; structu 97.4 0.00025 8.6E-09 68.8 7.1 88 112-209 38-138 (417)
234 3l9w_A Glutathione-regulated p 97.4 0.00065 2.2E-08 66.5 9.9 94 112-212 5-103 (413)
235 3jyo_A Quinate/shikimate dehyd 97.4 0.00015 5.2E-09 67.6 5.2 98 106-212 123-229 (283)
236 4gqa_A NAD binding oxidoreduct 97.4 0.00028 9.7E-09 67.8 7.1 86 112-200 27-118 (412)
237 3f4l_A Putative oxidoreductase 97.4 0.00015 5E-09 68.3 4.9 86 112-209 3-93 (345)
238 2ixa_A Alpha-N-acetylgalactosa 97.3 0.00074 2.5E-08 65.9 9.9 88 112-208 21-118 (444)
239 3gdo_A Uncharacterized oxidore 97.3 0.00052 1.8E-08 65.0 8.1 84 112-209 6-93 (358)
240 1zh8_A Oxidoreductase; TM0312, 97.3 0.00045 1.5E-08 65.0 7.5 82 112-200 19-104 (340)
241 2i6t_A Ubiquitin-conjugating e 97.3 0.0018 6.2E-08 60.8 11.6 90 111-212 14-125 (303)
242 3u3x_A Oxidoreductase; structu 97.3 0.00086 2.9E-08 63.7 9.5 80 112-200 27-110 (361)
243 3e82_A Putative oxidoreductase 97.3 0.00091 3.1E-08 63.5 9.6 84 112-209 8-95 (364)
244 3abi_A Putative uncharacterize 97.3 0.00041 1.4E-08 66.0 7.2 96 107-213 11-109 (365)
245 1pjc_A Protein (L-alanine dehy 97.3 0.00023 7.8E-09 68.1 5.2 98 107-212 164-267 (361)
246 3kux_A Putative oxidoreductase 97.3 0.00052 1.8E-08 64.6 7.6 83 112-208 8-94 (352)
247 3fhl_A Putative oxidoreductase 97.2 0.00049 1.7E-08 65.2 7.0 78 112-200 6-87 (362)
248 1ur5_A Malate dehydrogenase; o 97.2 0.0022 7.5E-08 60.0 11.3 67 112-187 3-79 (309)
249 1oju_A MDH, malate dehydrogena 97.2 0.0014 4.7E-08 61.5 9.8 69 112-187 1-78 (294)
250 2vt3_A REX, redox-sensing tran 97.2 0.0002 6.8E-09 64.5 3.7 81 112-201 86-168 (215)
251 2b0j_A 5,10-methenyltetrahydro 97.2 0.0026 8.9E-08 60.2 11.3 107 159-287 126-237 (358)
252 1cf2_P Protein (glyceraldehyde 97.2 0.0014 4.8E-08 62.5 9.7 96 111-214 1-111 (337)
253 1lc0_A Biliverdin reductase A; 97.1 0.00035 1.2E-08 64.7 5.0 85 112-210 8-95 (294)
254 1y6j_A L-lactate dehydrogenase 97.1 0.0015 5E-08 61.6 9.2 93 112-211 8-122 (318)
255 2nvw_A Galactose/lactose metab 97.1 0.00066 2.3E-08 67.4 7.1 84 112-200 40-130 (479)
256 3oqb_A Oxidoreductase; structu 97.1 0.00072 2.5E-08 64.2 7.0 86 112-209 7-111 (383)
257 3ip3_A Oxidoreductase, putativ 97.1 0.00053 1.8E-08 64.2 6.0 80 112-200 3-89 (337)
258 1b7g_O Protein (glyceraldehyde 97.1 0.0026 9.1E-08 60.6 10.9 95 111-213 1-109 (340)
259 3btv_A Galactose/lactose metab 97.1 0.00063 2.2E-08 66.5 6.5 84 112-200 21-111 (438)
260 2c2x_A Methylenetetrahydrofola 97.1 0.001 3.5E-08 62.5 7.5 78 106-212 154-232 (281)
261 3tnl_A Shikimate dehydrogenase 97.1 0.00056 1.9E-08 64.9 5.6 99 106-212 150-263 (315)
262 3nep_X Malate dehydrogenase; h 97.1 0.0018 6.3E-08 61.2 9.1 68 112-188 1-79 (314)
263 3fbt_A Chorismate mutase and s 97.0 0.00039 1.3E-08 65.0 4.1 92 106-212 118-214 (282)
264 2yv1_A Succinyl-COA ligase [AD 97.0 0.0011 3.7E-08 62.1 6.7 91 112-216 14-107 (294)
265 1nvt_A Shikimate 5'-dehydrogen 97.0 0.00024 8.2E-09 65.6 2.1 94 107-212 125-230 (287)
266 3p7m_A Malate dehydrogenase; p 97.0 0.0033 1.1E-07 59.6 10.0 67 112-187 6-82 (321)
267 3do5_A HOM, homoserine dehydro 97.0 0.0025 8.7E-08 60.6 9.3 99 110-211 1-114 (327)
268 4ew6_A D-galactose-1-dehydroge 97.0 0.0016 5.6E-08 61.1 7.8 80 112-209 26-109 (330)
269 3pqe_A L-LDH, L-lactate dehydr 97.0 0.0026 8.9E-08 60.5 9.2 70 112-187 6-82 (326)
270 2d4a_B Malate dehydrogenase; a 97.0 0.0018 6.2E-08 60.8 8.0 89 113-211 1-115 (308)
271 2yv2_A Succinyl-COA synthetase 97.0 0.0018 6.2E-08 60.6 8.0 91 112-216 14-108 (297)
272 3gvi_A Malate dehydrogenase; N 96.9 0.0033 1.1E-07 59.7 9.8 67 112-187 8-84 (324)
273 4ina_A Saccharopine dehydrogen 96.9 0.0012 4.1E-08 64.1 6.7 93 111-212 1-107 (405)
274 4f3y_A DHPR, dihydrodipicolina 96.9 0.0022 7.4E-08 59.6 8.1 162 111-287 7-186 (272)
275 3d0o_A L-LDH 1, L-lactate dehy 96.9 0.0044 1.5E-07 58.2 10.2 90 112-212 7-123 (317)
276 4gmf_A Yersiniabactin biosynth 96.9 0.0011 3.9E-08 63.9 6.2 86 112-209 8-98 (372)
277 3ldh_A Lactate dehydrogenase; 96.8 0.0026 9E-08 60.8 8.3 94 109-211 20-137 (330)
278 1ez4_A Lactate dehydrogenase; 96.8 0.0035 1.2E-07 59.1 8.9 68 112-189 6-83 (318)
279 2axq_A Saccharopine dehydrogen 96.8 0.0032 1.1E-07 62.6 8.9 99 105-212 18-119 (467)
280 1vl6_A Malate oxidoreductase; 96.8 0.0038 1.3E-07 61.0 9.3 93 106-212 188-294 (388)
281 2zqz_A L-LDH, L-lactate dehydr 96.8 0.0042 1.4E-07 58.9 9.2 72 112-189 10-87 (326)
282 2yyy_A Glyceraldehyde-3-phosph 96.8 0.0077 2.6E-07 57.7 11.0 92 112-214 3-115 (343)
283 3dfz_A SIRC, precorrin-2 dehyd 96.8 0.005 1.7E-07 55.7 9.2 89 100-198 22-111 (223)
284 3fef_A Putative glucosidase LP 96.7 0.0028 9.7E-08 62.9 7.3 72 112-189 6-86 (450)
285 3tl2_A Malate dehydrogenase; c 96.7 0.0043 1.5E-07 58.6 8.3 66 112-186 9-86 (315)
286 1npy_A Hypothetical shikimate 96.7 0.0015 5.2E-08 60.4 5.1 89 109-212 118-213 (271)
287 3t4e_A Quinate/shikimate dehyd 96.6 0.0027 9.1E-08 60.1 6.4 100 106-212 144-257 (312)
288 2ozp_A N-acetyl-gamma-glutamyl 96.6 0.0044 1.5E-07 59.2 7.9 93 112-213 5-100 (345)
289 1ff9_A Saccharopine reductase; 96.6 0.0042 1.5E-07 61.2 7.9 77 112-194 4-84 (450)
290 2xxj_A L-LDH, L-lactate dehydr 96.6 0.004 1.4E-07 58.5 7.3 68 112-189 1-78 (310)
291 3keo_A Redox-sensing transcrip 96.5 0.00089 3E-08 60.3 2.5 83 112-200 85-170 (212)
292 1ys4_A Aspartate-semialdehyde 96.5 0.0058 2E-07 58.3 8.3 95 112-214 9-116 (354)
293 3dr3_A N-acetyl-gamma-glutamyl 96.5 0.0073 2.5E-07 57.8 8.7 93 111-213 4-107 (337)
294 1jw9_B Molybdopterin biosynthe 96.5 0.0064 2.2E-07 55.1 7.7 88 105-199 26-142 (249)
295 1mld_A Malate dehydrogenase; o 96.5 0.015 5.3E-07 54.5 10.5 68 112-187 1-77 (314)
296 3upl_A Oxidoreductase; rossman 96.4 0.0073 2.5E-07 60.0 8.5 87 112-209 24-136 (446)
297 3ijp_A DHPR, dihydrodipicolina 96.4 0.0045 1.5E-07 58.1 6.5 160 110-287 20-201 (288)
298 1xyg_A Putative N-acetyl-gamma 96.4 0.0062 2.1E-07 58.5 7.4 91 112-213 17-113 (359)
299 4b4u_A Bifunctional protein fo 96.4 0.008 2.7E-07 56.9 7.9 76 106-212 175-251 (303)
300 4aj2_A L-lactate dehydrogenase 96.4 0.0076 2.6E-07 57.4 7.9 71 108-186 17-95 (331)
301 3vku_A L-LDH, L-lactate dehydr 96.4 0.0046 1.6E-07 58.8 6.3 74 107-187 6-85 (326)
302 2dt5_A AT-rich DNA-binding pro 96.3 0.0013 4.4E-08 59.0 2.1 81 112-200 81-162 (211)
303 3tum_A Shikimate dehydrogenase 96.3 0.0024 8.3E-08 59.2 4.0 99 106-211 121-224 (269)
304 3e8x_A Putative NAD-dependent 96.3 0.011 3.9E-07 51.4 7.9 76 105-189 16-95 (236)
305 1lnq_A MTHK channels, potassiu 96.3 0.011 3.9E-07 55.0 8.4 92 112-212 116-212 (336)
306 4g65_A TRK system potassium up 96.2 0.0069 2.4E-07 59.9 6.9 74 112-192 4-82 (461)
307 2dvm_A Malic enzyme, 439AA lon 96.2 0.013 4.5E-07 58.0 8.6 94 106-212 182-296 (439)
308 3lk7_A UDP-N-acetylmuramoylala 96.2 0.012 4.1E-07 57.6 8.3 75 105-188 4-84 (451)
309 1j5p_A Aspartate dehydrogenase 96.1 0.0068 2.3E-07 56.0 5.7 80 112-213 13-93 (253)
310 1obb_A Maltase, alpha-glucosid 96.1 0.022 7.6E-07 57.0 9.7 73 112-188 4-87 (480)
311 3eag_A UDP-N-acetylmuramate:L- 96.1 0.029 9.9E-07 52.5 10.0 71 111-189 4-79 (326)
312 2ep5_A 350AA long hypothetical 96.0 0.013 4.4E-07 55.9 7.3 93 112-213 5-109 (350)
313 2nqt_A N-acetyl-gamma-glutamyl 96.0 0.0078 2.7E-07 57.8 5.8 90 111-214 9-112 (352)
314 3ius_A Uncharacterized conserv 95.9 0.021 7.3E-07 50.8 8.1 70 111-189 5-74 (286)
315 3ing_A Homoserine dehydrogenas 95.9 0.016 5.4E-07 55.0 7.3 98 112-211 5-116 (325)
316 3mtj_A Homoserine dehydrogenas 95.9 0.031 1.1E-06 55.4 9.6 91 113-211 12-109 (444)
317 1smk_A Malate dehydrogenase, g 95.8 0.028 9.7E-07 52.9 8.6 68 112-187 9-85 (326)
318 3ew7_A LMO0794 protein; Q8Y8U8 95.7 0.049 1.7E-06 46.2 9.3 70 112-189 1-72 (221)
319 1vkn_A N-acetyl-gamma-glutamyl 95.7 0.017 5.7E-07 55.6 6.6 90 111-213 13-108 (351)
320 1p9l_A Dihydrodipicolinate red 95.6 0.044 1.5E-06 50.0 9.1 144 112-285 1-156 (245)
321 1dih_A Dihydrodipicolinate red 95.6 0.0049 1.7E-07 57.0 2.7 161 112-286 6-184 (273)
322 1u8f_O GAPDH, glyceraldehyde-3 95.6 0.043 1.5E-06 52.2 9.1 90 112-210 4-120 (335)
323 1duv_G Octase-1, ornithine tra 95.6 0.078 2.7E-06 50.7 10.8 72 107-187 152-233 (333)
324 1pvv_A Otcase, ornithine carba 95.5 0.1 3.5E-06 49.5 11.5 73 106-187 151-232 (315)
325 2x0j_A Malate dehydrogenase; o 95.5 0.012 4E-07 55.3 4.9 69 112-186 1-77 (294)
326 1dxh_A Ornithine carbamoyltran 95.5 0.081 2.8E-06 50.6 10.7 72 107-187 152-233 (335)
327 1p3d_A UDP-N-acetylmuramate--a 95.5 0.039 1.3E-06 54.2 8.6 79 98-185 5-84 (475)
328 1p0f_A NADP-dependent alcohol 95.3 0.14 4.7E-06 48.2 11.5 93 109-212 191-293 (373)
329 3e5r_O PP38, glyceraldehyde-3- 95.2 0.055 1.9E-06 51.6 8.6 93 112-212 4-126 (337)
330 3qvo_A NMRA family protein; st 95.2 0.0076 2.6E-07 52.9 2.4 93 112-211 24-124 (236)
331 1u8x_X Maltose-6'-phosphate gl 95.2 0.08 2.7E-06 52.7 9.9 77 112-190 29-114 (472)
332 1cdo_A Alcohol dehydrogenase; 95.2 0.15 5E-06 48.0 11.3 92 109-211 192-293 (374)
333 1s6y_A 6-phospho-beta-glucosid 95.2 0.1 3.4E-06 51.6 10.5 75 112-190 8-95 (450)
334 1e3i_A Alcohol dehydrogenase, 95.2 0.14 4.9E-06 48.1 11.2 92 109-211 195-296 (376)
335 4dpk_A Malonyl-COA/succinyl-CO 95.1 0.078 2.7E-06 50.9 9.4 88 112-213 8-111 (359)
336 4dpl_A Malonyl-COA/succinyl-CO 95.1 0.078 2.7E-06 50.9 9.4 88 112-213 8-111 (359)
337 4hv4_A UDP-N-acetylmuramate--L 95.1 0.05 1.7E-06 54.0 8.2 69 111-188 22-93 (494)
338 3r6d_A NAD-dependent epimerase 95.1 0.049 1.7E-06 46.8 7.2 72 112-189 6-84 (221)
339 1gtm_A Glutamate dehydrogenase 95.1 0.021 7.2E-07 56.1 5.4 37 106-149 207-245 (419)
340 2jhf_A Alcohol dehydrogenase E 95.1 0.15 5.1E-06 47.9 11.0 93 109-212 191-293 (374)
341 3c8m_A Homoserine dehydrogenas 95.0 0.058 2E-06 51.0 8.1 94 112-211 7-120 (331)
342 1ebf_A Homoserine dehydrogenas 95.0 0.019 6.6E-07 55.1 4.6 88 112-210 5-113 (358)
343 1zud_1 Adenylyltransferase THI 95.0 0.06 2.1E-06 48.7 7.7 88 105-199 23-139 (251)
344 1lu9_A Methylene tetrahydromet 95.0 0.027 9.2E-07 51.5 5.4 73 107-188 116-198 (287)
345 3fi9_A Malate dehydrogenase; s 94.9 0.026 8.9E-07 54.0 5.3 71 109-186 7-84 (343)
346 1pjq_A CYSG, siroheme synthase 94.9 0.11 3.7E-06 51.2 9.9 86 101-196 4-91 (457)
347 2fzw_A Alcohol dehydrogenase c 94.9 0.16 5.4E-06 47.7 10.6 93 109-212 190-292 (373)
348 1o6z_A MDH, malate dehydrogena 94.9 0.061 2.1E-06 50.0 7.7 66 112-187 1-79 (303)
349 1b8p_A Protein (malate dehydro 94.9 0.066 2.3E-06 50.3 7.9 69 112-187 6-92 (329)
350 4a2c_A Galactitol-1-phosphate 94.9 0.14 4.7E-06 47.4 10.0 97 106-212 157-260 (346)
351 3ip1_A Alcohol dehydrogenase, 94.8 0.18 6E-06 48.2 11.0 97 108-212 212-318 (404)
352 1t4b_A Aspartate-semialdehyde 94.8 0.044 1.5E-06 52.8 6.7 91 111-213 1-99 (367)
353 2ejw_A HDH, homoserine dehydro 94.8 0.032 1.1E-06 53.1 5.6 89 112-210 4-96 (332)
354 1qyc_A Phenylcoumaran benzylic 94.8 0.1 3.5E-06 46.7 8.7 82 111-198 4-100 (308)
355 3uko_A Alcohol dehydrogenase c 94.8 0.11 3.8E-06 48.9 9.3 93 109-212 193-295 (378)
356 3two_A Mannitol dehydrogenase; 94.8 0.063 2.2E-06 50.0 7.5 91 108-212 175-265 (348)
357 4f2g_A Otcase 1, ornithine car 94.7 0.048 1.6E-06 51.7 6.6 69 106-186 150-224 (309)
358 3hhp_A Malate dehydrogenase; M 94.7 0.098 3.4E-06 49.3 8.7 72 112-187 1-78 (312)
359 3tpf_A Otcase, ornithine carba 94.7 0.15 5E-06 48.2 9.9 72 106-186 141-222 (307)
360 2cdc_A Glucose dehydrogenase g 94.7 0.053 1.8E-06 51.0 6.9 94 107-212 178-278 (366)
361 2f00_A UDP-N-acetylmuramate--L 94.7 0.077 2.6E-06 52.4 8.3 70 107-185 15-85 (491)
362 3q2o_A Phosphoribosylaminoimid 94.7 0.028 9.4E-07 53.4 4.8 69 107-186 11-83 (389)
363 2i6u_A Otcase, ornithine carba 94.6 0.078 2.7E-06 50.1 7.6 71 106-187 144-226 (307)
364 4ej6_A Putative zinc-binding d 94.6 0.088 3E-06 49.8 8.1 95 108-212 181-284 (370)
365 1vlv_A Otcase, ornithine carba 94.5 0.078 2.7E-06 50.5 7.6 73 106-187 163-245 (325)
366 2r6j_A Eugenol synthase 1; phe 94.5 0.14 4.9E-06 46.3 9.1 72 112-189 12-90 (318)
367 3ff4_A Uncharacterized protein 94.5 0.094 3.2E-06 42.9 7.0 109 111-243 4-116 (122)
368 1e3j_A NADP(H)-dependent ketos 94.5 0.18 6.2E-06 46.9 9.9 93 109-212 168-271 (352)
369 2dph_A Formaldehyde dismutase; 94.4 0.053 1.8E-06 51.7 6.2 96 109-212 185-299 (398)
370 1pl8_A Human sorbitol dehydrog 94.4 0.13 4.3E-06 48.2 8.6 93 109-212 171-273 (356)
371 2d8a_A PH0655, probable L-thre 94.4 0.076 2.6E-06 49.5 7.0 93 109-212 167-267 (348)
372 1kol_A Formaldehyde dehydrogen 94.3 0.096 3.3E-06 49.7 7.7 97 109-212 185-300 (398)
373 4gx0_A TRKA domain protein; me 94.3 0.088 3E-06 52.5 7.7 91 112-211 349-442 (565)
374 3s2e_A Zinc-containing alcohol 94.3 0.13 4.5E-06 47.6 8.4 94 108-212 165-263 (340)
375 1f8f_A Benzyl alcohol dehydrog 94.3 0.085 2.9E-06 49.6 7.2 94 109-212 190-289 (371)
376 3r7f_A Aspartate carbamoyltran 94.2 0.097 3.3E-06 49.4 7.3 66 106-186 143-211 (304)
377 3h2s_A Putative NADH-flavin re 94.1 0.31 1E-05 41.4 9.7 69 112-188 1-72 (224)
378 1pqw_A Polyketide synthase; ro 94.1 0.14 4.7E-06 43.4 7.5 93 109-213 38-138 (198)
379 2r00_A Aspartate-semialdehyde 94.1 0.045 1.5E-06 51.9 4.8 91 111-214 3-98 (336)
380 3hsk_A Aspartate-semialdehyde 94.0 0.11 3.6E-06 50.5 7.5 88 112-213 20-125 (381)
381 3gaz_A Alcohol dehydrogenase s 94.0 0.14 4.6E-06 47.8 8.0 91 109-213 150-247 (343)
382 3dhn_A NAD-dependent epimerase 94.0 0.021 7.2E-07 49.0 2.3 71 111-189 4-78 (227)
383 3c1o_A Eugenol synthase; pheny 94.0 0.18 6.2E-06 45.6 8.6 82 111-198 4-100 (321)
384 2gas_A Isoflavone reductase; N 94.0 0.19 6.5E-06 44.9 8.6 72 112-189 3-87 (307)
385 3dqp_A Oxidoreductase YLBE; al 94.0 0.067 2.3E-06 45.9 5.3 69 112-189 1-74 (219)
386 4ep1_A Otcase, ornithine carba 94.0 0.13 4.4E-06 49.4 7.7 73 106-187 175-256 (340)
387 2w37_A Ornithine carbamoyltran 93.9 0.12 4.1E-06 49.9 7.5 71 106-187 172-254 (359)
388 4a7p_A UDP-glucose dehydrogena 93.9 0.13 4.3E-06 50.9 7.8 95 106-215 318-425 (446)
389 3gg2_A Sugar dehydrogenase, UD 93.9 0.2 6.9E-06 49.2 9.2 94 106-214 314-421 (450)
390 1ml4_A Aspartate transcarbamoy 93.8 0.092 3.2E-06 49.6 6.5 73 106-187 151-230 (308)
391 3fpf_A Mtnas, putative unchara 93.8 0.25 8.7E-06 46.4 9.4 91 108-209 121-219 (298)
392 1oth_A Protein (ornithine tran 93.8 0.16 5.3E-06 48.4 7.9 70 106-186 151-231 (321)
393 3grf_A Ornithine carbamoyltran 93.7 0.17 5.7E-06 48.3 8.0 70 107-185 158-241 (328)
394 1y1p_A ARII, aldehyde reductas 93.7 0.32 1.1E-05 43.8 9.7 76 106-188 7-93 (342)
395 3orq_A N5-carboxyaminoimidazol 93.7 0.037 1.3E-06 52.6 3.4 67 107-184 9-79 (377)
396 4amu_A Ornithine carbamoyltran 93.6 0.16 5.5E-06 49.1 7.8 72 106-186 176-259 (365)
397 1rjw_A ADH-HT, alcohol dehydro 93.6 0.27 9.4E-06 45.5 9.3 93 109-212 164-261 (339)
398 3i6i_A Putative leucoanthocyan 93.5 0.083 2.8E-06 48.6 5.5 72 112-189 11-94 (346)
399 3cps_A Glyceraldehyde 3-phosph 93.5 0.22 7.4E-06 47.9 8.5 98 107-213 13-139 (354)
400 2qrj_A Saccharopine dehydrogen 93.5 0.027 9.3E-07 55.1 2.2 79 112-212 215-300 (394)
401 2ef0_A Ornithine carbamoyltran 93.4 0.23 7.9E-06 46.7 8.4 71 106-187 150-222 (301)
402 3gd5_A Otcase, ornithine carba 93.4 0.21 7.1E-06 47.6 8.1 71 106-187 153-234 (323)
403 3tz6_A Aspartate-semialdehyde 93.4 0.17 5.7E-06 48.4 7.5 86 112-213 2-95 (344)
404 3e05_A Precorrin-6Y C5,15-meth 93.4 0.52 1.8E-05 39.8 9.9 93 108-211 39-141 (204)
405 3d6n_B Aspartate carbamoyltran 93.4 0.084 2.9E-06 49.6 5.3 72 106-190 142-216 (291)
406 1qyd_A Pinoresinol-lariciresin 93.4 0.2 6.9E-06 44.9 7.7 73 111-189 4-87 (313)
407 2ph5_A Homospermidine synthase 93.4 0.21 7.1E-06 50.0 8.4 93 112-213 14-115 (480)
408 3fpc_A NADP-dependent alcohol 93.3 0.083 2.9E-06 49.3 5.2 94 108-212 165-266 (352)
409 3hn7_A UDP-N-acetylmuramate-L- 93.3 0.25 8.6E-06 49.3 9.0 74 107-189 16-93 (524)
410 3ruf_A WBGU; rossmann fold, UD 93.3 0.37 1.3E-05 43.9 9.5 76 106-188 21-110 (351)
411 1kyq_A Met8P, siroheme biosynt 93.2 0.099 3.4E-06 48.6 5.4 38 105-149 8-45 (274)
412 3uog_A Alcohol dehydrogenase; 93.2 0.099 3.4E-06 49.1 5.5 92 109-212 189-287 (363)
413 4ffl_A PYLC; amino acid, biosy 93.2 0.19 6.4E-06 46.9 7.4 33 111-149 1-33 (363)
414 1hdo_A Biliverdin IX beta redu 93.2 0.25 8.7E-06 41.1 7.6 71 112-189 4-78 (206)
415 3fbg_A Putative arginate lyase 93.2 0.21 7.1E-06 46.5 7.6 94 109-213 150-249 (346)
416 1yqd_A Sinapyl alcohol dehydro 93.2 0.11 3.9E-06 48.8 5.9 91 109-212 187-282 (366)
417 3m2p_A UDP-N-acetylglucosamine 93.2 0.14 4.9E-06 46.1 6.4 69 112-188 3-72 (311)
418 1uuf_A YAHK, zinc-type alcohol 93.2 0.15 5.1E-06 48.2 6.7 91 109-212 194-288 (369)
419 2wm3_A NMRA-like family domain 93.2 0.45 1.5E-05 42.5 9.6 71 112-188 6-82 (299)
420 4h7p_A Malate dehydrogenase; s 93.1 0.31 1.1E-05 46.6 8.9 80 105-186 19-108 (345)
421 2csu_A 457AA long hypothetical 93.1 0.18 6.2E-06 49.7 7.5 88 112-215 9-100 (457)
422 2x5j_O E4PDH, D-erythrose-4-ph 93.1 0.33 1.1E-05 46.2 9.0 93 112-213 3-126 (339)
423 2hjs_A USG-1 protein homolog; 93.0 0.068 2.3E-06 50.7 4.2 89 112-213 7-100 (340)
424 1iz0_A Quinone oxidoreductase; 93.0 0.11 3.8E-06 47.3 5.4 91 109-212 125-218 (302)
425 2hcy_A Alcohol dehydrogenase 1 93.0 0.31 1.1E-05 45.2 8.6 93 109-212 169-269 (347)
426 1sb8_A WBPP; epimerase, 4-epim 93.0 0.42 1.4E-05 43.8 9.4 76 106-188 23-112 (352)
427 3sds_A Ornithine carbamoyltran 93.0 0.24 8.1E-06 47.7 7.8 68 108-186 186-266 (353)
428 3pwk_A Aspartate-semialdehyde 93.0 0.067 2.3E-06 51.7 4.0 86 112-213 3-96 (366)
429 3aog_A Glutamate dehydrogenase 92.9 0.21 7.1E-06 49.5 7.5 32 106-144 231-262 (440)
430 2bka_A CC3, TAT-interacting pr 92.9 0.25 8.6E-06 42.6 7.3 75 108-189 16-95 (242)
431 4e4t_A Phosphoribosylaminoimid 92.9 0.079 2.7E-06 51.3 4.4 68 107-184 32-102 (419)
432 3g79_A NDP-N-acetyl-D-galactos 92.8 0.31 1.1E-05 48.6 8.6 92 107-215 350-453 (478)
433 2yfk_A Aspartate/ornithine car 92.7 0.24 8.3E-06 48.7 7.7 70 108-186 186-271 (418)
434 2c0c_A Zinc binding alcohol de 92.7 0.27 9.2E-06 46.2 7.8 93 109-213 163-262 (362)
435 1piw_A Hypothetical zinc-type 92.7 0.089 3E-06 49.3 4.4 95 109-212 179-276 (360)
436 2a9f_A Putative malic enzyme ( 92.7 0.18 6.1E-06 49.4 6.6 94 106-213 184-290 (398)
437 3jv7_A ADH-A; dehydrogenase, n 92.6 0.26 9E-06 45.6 7.5 94 108-212 170-270 (345)
438 4b7c_A Probable oxidoreductase 92.6 0.19 6.6E-06 46.3 6.5 93 109-213 149-249 (336)
439 4g65_A TRK system potassium up 92.6 0.59 2E-05 46.0 10.3 93 112-211 236-333 (461)
440 3qwb_A Probable quinone oxidor 92.5 0.19 6.5E-06 46.4 6.4 93 108-212 147-247 (334)
441 2b5w_A Glucose dehydrogenase; 92.5 0.29 1E-05 45.7 7.7 93 108-212 171-273 (357)
442 4eye_A Probable oxidoreductase 92.5 0.19 6.4E-06 46.8 6.3 91 109-212 159-257 (342)
443 3jyn_A Quinone oxidoreductase; 92.5 0.22 7.7E-06 45.8 6.8 92 109-212 140-239 (325)
444 2pzm_A Putative nucleotide sug 92.5 0.17 5.7E-06 46.3 5.8 76 105-187 15-97 (330)
445 4id9_A Short-chain dehydrogena 92.4 0.045 1.5E-06 50.1 1.9 69 105-187 14-86 (347)
446 3tqh_A Quinone oxidoreductase; 92.4 0.17 5.9E-06 46.5 5.8 93 108-213 151-246 (321)
447 4a0s_A Octenoyl-COA reductase/ 92.3 0.46 1.6E-05 45.7 9.0 92 109-212 220-336 (447)
448 3goh_A Alcohol dehydrogenase, 92.3 0.17 5.9E-06 46.2 5.7 89 109-213 142-230 (315)
449 3b1j_A Glyceraldehyde 3-phosph 92.3 0.52 1.8E-05 44.9 9.2 95 112-213 3-125 (339)
450 3cmc_O GAPDH, glyceraldehyde-3 92.2 0.36 1.2E-05 45.9 8.0 94 111-213 1-122 (334)
451 2x5o_A UDP-N-acetylmuramoylala 92.2 0.078 2.7E-06 51.5 3.4 70 107-186 2-72 (439)
452 2fk8_A Methoxy mycolic acid sy 92.2 0.83 2.8E-05 41.4 10.2 94 108-210 89-192 (318)
453 1gad_O D-glyceraldehyde-3-phos 92.1 0.28 9.6E-06 46.6 7.1 93 111-211 1-118 (330)
454 2h1q_A Hypothetical protein; Z 92.1 0.24 8.3E-06 45.9 6.4 88 100-211 131-218 (270)
455 3gqv_A Enoyl reductase; medium 92.1 1.2 4.1E-05 41.8 11.5 93 108-212 163-263 (371)
456 7mdh_A Protein (malate dehydro 92.1 0.56 1.9E-05 45.4 9.2 69 112-186 33-116 (375)
457 4fs3_A Enoyl-[acyl-carrier-pro 92.1 0.85 2.9E-05 40.6 9.9 39 106-151 2-43 (256)
458 3aoe_E Glutamate dehydrogenase 92.1 0.18 6.3E-06 49.6 5.9 77 106-191 214-302 (419)
459 1v3u_A Leukotriene B4 12- hydr 92.0 0.46 1.6E-05 43.7 8.2 92 109-212 145-244 (333)
460 3gpi_A NAD-dependent epimerase 91.9 0.055 1.9E-06 48.3 1.8 68 112-188 4-73 (286)
461 4a8t_A Putrescine carbamoyltra 91.9 0.29 1E-05 46.8 6.9 70 107-186 172-250 (339)
462 1orr_A CDP-tyvelose-2-epimeras 91.7 0.79 2.7E-05 41.4 9.4 72 111-188 1-83 (347)
463 3csu_A Protein (aspartate carb 91.7 0.44 1.5E-05 45.0 7.8 73 106-186 150-229 (310)
464 4dup_A Quinone oxidoreductase; 91.7 0.28 9.6E-06 45.8 6.5 92 109-212 167-265 (353)
465 2o7s_A DHQ-SDH PR, bifunctiona 91.7 0.14 5E-06 51.0 4.7 73 107-188 361-434 (523)
466 3q98_A Transcarbamylase; rossm 91.6 0.38 1.3E-05 47.0 7.5 71 107-186 188-274 (399)
467 2vn8_A Reticulon-4-interacting 91.6 1.1 3.9E-05 41.9 10.6 95 108-213 182-281 (375)
468 2q3e_A UDP-glucose 6-dehydroge 91.5 0.96 3.3E-05 44.3 10.3 98 106-215 325-446 (467)
469 3i1j_A Oxidoreductase, short c 91.4 0.66 2.3E-05 40.3 8.3 45 99-150 3-48 (247)
470 2y0c_A BCEC, UDP-glucose dehyd 91.4 1 3.5E-05 44.5 10.5 94 107-215 325-442 (478)
471 2tmg_A Protein (glutamate dehy 91.4 0.35 1.2E-05 47.5 7.0 79 106-191 205-298 (415)
472 3gms_A Putative NADPH:quinone 91.3 0.39 1.3E-05 44.4 7.0 93 108-212 143-243 (340)
473 4a8p_A Putrescine carbamoyltra 91.3 0.35 1.2E-05 46.6 6.8 70 107-186 150-228 (355)
474 1xgk_A Nitrogen metabolite rep 91.3 1.8 6.2E-05 40.3 11.6 71 112-188 6-83 (352)
475 3m6i_A L-arabinitol 4-dehydrog 91.2 0.71 2.4E-05 43.0 8.7 94 108-212 178-283 (363)
476 1hdg_O Holo-D-glyceraldehyde-3 91.2 0.71 2.4E-05 43.8 8.8 96 112-213 1-123 (332)
477 3hm2_A Precorrin-6Y C5,15-meth 91.2 0.9 3.1E-05 36.9 8.4 91 108-210 24-125 (178)
478 1zsy_A Mitochondrial 2-enoyl t 91.1 1.1 3.6E-05 41.8 9.8 94 109-213 167-271 (357)
479 3o38_A Short chain dehydrogena 91.0 0.45 1.5E-05 42.0 6.8 38 106-150 18-57 (266)
480 3tfw_A Putative O-methyltransf 90.9 1.3 4.3E-05 39.1 9.7 97 106-209 60-167 (248)
481 2q1s_A Putative nucleotide sug 90.9 0.35 1.2E-05 45.0 6.3 76 106-188 28-109 (377)
482 1y8q_A Ubiquitin-like 1 activa 90.8 0.41 1.4E-05 45.5 6.7 89 105-200 31-147 (346)
483 2nxc_A L11 mtase, ribosomal pr 90.8 0.66 2.3E-05 41.3 7.7 92 109-211 120-217 (254)
484 2yfq_A Padgh, NAD-GDH, NAD-spe 90.7 0.15 5.2E-06 50.1 3.7 36 106-148 208-243 (421)
485 4dvj_A Putative zinc-dependent 90.7 1 3.5E-05 42.2 9.4 92 109-211 171-269 (363)
486 3rui_A Ubiquitin-like modifier 90.7 1.1 3.6E-05 42.9 9.5 36 105-147 29-65 (340)
487 3nrc_A Enoyl-[acyl-carrier-pro 90.7 1.1 3.8E-05 40.1 9.2 39 105-150 21-62 (280)
488 2o3j_A UDP-glucose 6-dehydroge 90.7 1.4 4.8E-05 43.4 10.7 98 107-215 332-450 (481)
489 1qor_A Quinone oxidoreductase; 90.5 0.39 1.3E-05 44.0 6.1 92 109-212 140-239 (327)
490 1kpg_A CFA synthase;, cyclopro 90.5 1.6 5.6E-05 38.6 10.1 89 109-209 64-165 (287)
491 3rwb_A TPLDH, pyridoxal 4-dehy 90.5 0.45 1.5E-05 41.9 6.3 39 106-151 2-41 (247)
492 2q1w_A Putative nucleotide sug 90.5 0.32 1.1E-05 44.4 5.5 76 105-187 16-98 (333)
493 1y7t_A Malate dehydrogenase; N 90.4 0.3 1E-05 45.3 5.3 69 112-186 5-88 (327)
494 1l3i_A Precorrin-6Y methyltran 90.3 0.93 3.2E-05 36.9 7.7 91 107-210 31-132 (192)
495 3edm_A Short chain dehydrogena 90.3 1.2 4.1E-05 39.5 8.9 40 106-152 4-44 (259)
496 4e6p_A Probable sorbitol dehyd 90.2 0.56 1.9E-05 41.5 6.7 39 106-151 4-43 (259)
497 2o23_A HADH2 protein; HSD17B10 90.2 0.61 2.1E-05 40.8 6.9 73 107-186 9-94 (265)
498 3l5o_A Uncharacterized protein 90.1 0.91 3.1E-05 42.1 8.2 88 100-211 131-218 (270)
499 3h5n_A MCCB protein; ubiquitin 90.0 0.56 1.9E-05 44.6 7.0 37 105-148 113-150 (353)
500 2d2i_A Glyceraldehyde 3-phosph 90.0 1.1 3.7E-05 43.5 9.0 85 112-200 3-113 (380)
No 1
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=100.00 E-value=1.7e-51 Score=411.83 Aligned_cols=247 Identities=86% Similarity=1.289 Sum_probs=229.2
Q ss_pred cccccccccchhhhhhccccchhhHHhhcCCccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEe
Q 021218 68 TPFLLDFETSVFKKDMISLADRDEYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGL 147 (316)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~l~~~~e~vv~~G~w~F~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~ 147 (316)
....++|+|++|.+++++|++..|+||++|+|+|+++++.|+|||||||||+|+||.++|++|+++++++|+|++|++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~g~~E~v~~~~~w~~~~~~~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~ 90 (525)
T 3fr7_A 11 AMPSLDFDTSVFNKEKVSLAGHEEYIVRGGRNLFPLLPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGL 90 (525)
T ss_dssp ----CCCCCSSSCEEEEEETTEEEEEEECCGGGGGGHHHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred cccccccccccceeeEeecCCcceEEEeccccccccChHHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEe
Confidence 34679999999999999999999999999999999889999999999999999999999999999988999999999999
Q ss_pred cCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeCCchhhhhhccccCCC
Q 021218 148 RKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFP 227 (316)
Q Consensus 148 r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~aGv~l~~l~~~~~~~~ 227 (316)
++++++.+.+++.|+...+++..++.|++++||+|||++||+.+.+++++++++||+|++|+++||+++.++++.+..+|
T Consensus 91 r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaVP~~~~~eVl~eI~p~LK~GaILs~AaGf~I~~le~~~i~~p 170 (525)
T 3fr7_A 91 RKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQADNYEKIFSHMKPNSILGLSHGFLLGHLQSAGLDFP 170 (525)
T ss_dssp CTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECSCHHHHHHHHHHHHHHSCTTCEEEESSSHHHHHHHHTTCCCC
T ss_pred CCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECCChHHHHHHHHHHHHhcCCCCeEEEeCCCCHHHHhhhcccCC
Confidence 98888899999999974223335889999999999999999999999999999999999999999999998876566788
Q ss_pred CCccEEEeccCCCchhhHHHHhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCCCeeecChhHHHhhcchhhhh
Q 021218 228 KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERG 307 (316)
Q Consensus 228 ~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~~~~~tT~~~e~~~dl~~e~~ 307 (316)
++++||++|||+|++.+|++|.+|+++||+|++++|++++|+++++++.+++|+.++|..++++||+++|+++||||||+
T Consensus 171 ~dv~VVrVmPNtPg~~VR~~y~~G~~~~g~Gv~~liAv~qd~tgea~e~alala~aiG~~~vieTtf~eE~e~DLfgeqt 250 (525)
T 3fr7_A 171 KNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERG 250 (525)
T ss_dssp TTSEEEEEEESSCHHHHHHHHHHHTTSTTCSCCEEEEEEECSSSCHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHT
T ss_pred CCCcEEEEecCCCchhHHHHHhcccccccCCccEEEEcCCCCCHHHHHHHHHHHHHCCCCeeeeeeeeeehhHhhhhhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCccc
Q 021218 308 ECFPASI 314 (316)
Q Consensus 308 ~l~g~~~ 314 (316)
+|||+++
T Consensus 251 vLsG~~p 257 (525)
T 3fr7_A 251 ILLGAVH 257 (525)
T ss_dssp TTTHHHH
T ss_pred hhcCcHH
Confidence 9999875
No 2
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=100.00 E-value=8.5e-45 Score=358.61 Aligned_cols=220 Identities=30% Similarity=0.485 Sum_probs=196.7
Q ss_pred ccccccchhhhhhccccchhhHHhhcCCccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCC
Q 021218 71 LLDFETSVFKKDMISLADRDEYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG 150 (316)
Q Consensus 71 ~~~~~~~~~~~~~~~l~~~~e~vv~~G~w~F~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~ 150 (316)
.+|||++.||.+..+|. ..+++ .|..|......|+| |+|+|||||+||.++|+|||++ |.+|+++.|++
T Consensus 2 ~ny~n~l~~~~~~~~~~-~c~~m---~~~eF~~~~~~lkg-K~IaVIGyGsQG~AqAlNLRDS------Gv~V~Vglr~~ 70 (491)
T 3ulk_A 2 ANYFNTLNLRQQLAQLG-KCRFM---GRDEFADGASYLQG-KKVVIVGCGAQGLNQGLNMRDS------GLDISYALRKE 70 (491)
T ss_dssp CCTGGGSCHHHHHHHHT-CCEEC---CGGGGTTTTGGGTT-SEEEEESCSHHHHHHHHHHHHT------TCEEEEEECHH
T ss_pred cchhccccHHHHHHHhc-cceec---cHHHhcchhHHHcC-CEEEEeCCChHhHHHHhHHHhc------CCcEEEEeCCC
Confidence 48999999997654332 22232 12356656789999 9999999999999999999999 99999999954
Q ss_pred c-----ccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeCCchhhhhhccccC
Q 021218 151 S-----RSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLD 225 (316)
Q Consensus 151 ~-----~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~aGv~l~~l~~~~~~ 225 (316)
+ ++++.|++.|+. +.+.+|++++||+|++++||..+.+++++|.++||+|++|..+|||++.+-. +.
T Consensus 71 s~~e~~~S~~~A~~~Gf~-----v~~~~eA~~~ADvV~~L~PD~~q~~vy~~I~p~lk~G~~L~faHGFnI~~~~---i~ 142 (491)
T 3ulk_A 71 AIAEKRASWRKATENGFK-----VGTYEELIPQADLVINLTPDKQHSDVVRTVQPLMKDGAALGYSHGFNIVEVG---EQ 142 (491)
T ss_dssp HHHTTCHHHHHHHHTTCE-----EEEHHHHGGGCSEEEECSCGGGHHHHHHHHGGGSCTTCEEEESSCHHHHTTC---CC
T ss_pred CcccccchHHHHHHCCCE-----ecCHHHHHHhCCEEEEeCChhhHHHHHHHHHhhCCCCCEEEecCcccccccc---cc
Confidence 3 789999999998 4589999999999999999999999999999999999999999999987644 48
Q ss_pred CCCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEeec--cCCCHHHHHHHHHHHHHcCCCC--eeecChhHHHhhc
Q 021218 226 FPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH--QDVDGRATNVALGWSVALGSPF--TFATTLEQEYRSD 301 (316)
Q Consensus 226 ~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~--~d~~~~a~e~a~~l~~alG~~~--~~~tT~~~e~~~d 301 (316)
+|++++||+++|++||+.+|++|++| .|+|++|+++ ||.++++++++++|+.++|+.| +++|||++||++|
T Consensus 143 pp~dvdVimVAPKgpG~~VR~~y~~G-----~GvP~liAVhqeqD~sG~a~~~AlayA~aiG~~raGvieTTF~eEtetD 217 (491)
T 3ulk_A 143 IRKDITVVMVAPKCPGTEVREEYKRG-----FGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSD 217 (491)
T ss_dssp CCTTSEEEEEEESSCHHHHHHHHHTT-----CCCCEEEEECGGGCTTSCHHHHHHHHHHHHTGGGTCEEECCHHHHHHHH
T ss_pred cCCCcceEEeCCCCCcHHHHHHHHcC-----CCCceEEEEEeCCCCchhHHHHHHHHHHhcCCCcCceeeccHHHHHHHH
Confidence 89999999999999999999999997 7999999997 8999999999999999999975 7999999999999
Q ss_pred chhhhhhccCccc
Q 021218 302 IFGERGECFPASI 314 (316)
Q Consensus 302 l~~e~~~l~g~~~ 314 (316)
|||||+||||++.
T Consensus 218 LfGEQaVLcGgl~ 230 (491)
T 3ulk_A 218 LMGEQTILCGMLQ 230 (491)
T ss_dssp HHHHHTTTTHHHH
T ss_pred HHhhHHHHHHHHH
Confidence 9999999999874
No 3
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.95 E-value=2.9e-28 Score=232.96 Aligned_cols=189 Identities=35% Similarity=0.596 Sum_probs=167.8
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEc
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLa 185 (316)
..+++ ++|+|||+|+||.++|++|+++ |++|++++++.++..+.+.+.|+.. . +.++++++||+|+++
T Consensus 12 ~~l~~-~~I~IIG~G~mG~alA~~L~~~------G~~V~~~~~~~~~~~~~a~~~G~~~----~-~~~e~~~~aDvVila 79 (338)
T 1np3_A 12 SIIQG-KKVAIIGYGSQGHAHACNLKDS------GVDVTVGLRSGSATVAKAEAHGLKV----A-DVKTAVAAADVVMIL 79 (338)
T ss_dssp HHHHT-SCEEEECCSHHHHHHHHHHHHT------TCCEEEECCTTCHHHHHHHHTTCEE----E-CHHHHHHTCSEEEEC
T ss_pred chhcC-CEEEEECchHHHHHHHHHHHHC------cCEEEEEECChHHHHHHHHHCCCEE----c-cHHHHHhcCCEEEEe
Confidence 57889 9999999999999999999999 9888888887666677888888763 2 788899999999999
Q ss_pred ccCchHHHHHH-HHHhcCCCCcEEEEeCCchhhhhhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEe
Q 021218 186 ISDAAQADNYE-KIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (316)
Q Consensus 186 vp~~~~~~vi~-ei~~~mk~gaiLid~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iia 264 (316)
+|++.+.++++ ++.++++++++|++++|++. .++. ...+.+++|+++||++|++.++++|..| .|.+++++
T Consensus 80 vp~~~~~~v~~~~i~~~l~~~~ivi~~~gv~~-~~~~--~~~~~~~~vv~~~P~gp~~a~~~l~~~G-----~g~~~ii~ 151 (338)
T 1np3_A 80 TPDEFQGRLYKEEIEPNLKKGATLAFAHGFSI-HYNQ--VVPRADLDVIMIAPKAPGHTVRSEFVKG-----GGIPDLIA 151 (338)
T ss_dssp SCHHHHHHHHHHHTGGGCCTTCEEEESCCHHH-HTTS--SCCCTTCEEEEEEESSCSHHHHHHHHTT-----CCCCEEEE
T ss_pred CCcHHHHHHHHHHHHhhCCCCCEEEEcCCchh-HHHh--hcCCCCcEEEeccCCCCchhHHHHHhcc-----CCCeEEEE
Confidence 99999989998 99999999999999999887 5443 2236678899999999999999999876 78999999
Q ss_pred eccCCCHHHHHHHHHHHHHcCCCC--eeecChhHHHhhcchhhhhhccCccc
Q 021218 265 VHQDVDGRATNVALGWSVALGSPF--TFATTLEQEYRSDIFGERGECFPASI 314 (316)
Q Consensus 265 p~~d~~~~a~e~a~~l~~alG~~~--~~~tT~~~e~~~dl~~e~~~l~g~~~ 314 (316)
|+++.++++.+.+++|++.+|..+ ++.+|+++|.+.|+|+++++|||+++
T Consensus 152 ~~~~~~~~a~~~~~~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp 203 (338)
T 1np3_A 152 IYQDASGNAKNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCV 203 (338)
T ss_dssp EEECSSSCHHHHHHHHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHH
T ss_pred ecCCCCHHHHHHHHHHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHH
Confidence 999999999999999999999766 89999999999999999999999864
No 4
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.83 E-value=5.4e-20 Score=174.37 Aligned_cols=169 Identities=14% Similarity=0.052 Sum_probs=130.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCcccHHHHHHCCceecCCCcCCHHh-hhccCCEEEEcccC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYE-TISGSDLVLLLISD 188 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e-~i~~ADIViLavp~ 188 (316)
++|+|||+|+||.++|++|++. |+ +|++.++ +++..+.+.+.|+.. ....++++ ++++||+||+|+|+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~------G~~~~V~~~dr-~~~~~~~a~~~G~~~--~~~~~~~~~~~~~aDvVilavp~ 104 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS------GFKGKIYGYDI-NPESISKAVDLGIID--EGTTSIAKVEDFSPDFVMLSSPV 104 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT------TCCSEEEEECS-CHHHHHHHHHTTSCS--EEESCTTGGGGGCCSEEEECSCG
T ss_pred CEEEEEeeCHHHHHHHHHHHhC------CCCCEEEEEEC-CHHHHHHHHHCCCcc--hhcCCHHHHhhccCCEEEEeCCH
Confidence 8999999999999999999999 88 7665554 455677788888752 12357778 89999999999999
Q ss_pred chHHHHHHHHHhcCCCCcEEEEeCCchh---hhhhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEee
Q 021218 189 AAQADNYEKIFSCMKPNSILGLSHGFLL---GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (316)
Q Consensus 189 ~~~~~vi~ei~~~mk~gaiLid~aGv~l---~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap 265 (316)
+...++++++.++++++++|+|+++++. ..++. .+++ +||..||.. +++. ..+...+...+.|..++++|
T Consensus 105 ~~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~---~l~~--~~v~~hPm~-G~e~-sG~~~A~~~Lf~g~~~il~~ 177 (314)
T 3ggo_A 105 RTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLEN---ILGK--RFVGGHPIA-GTEK-SGVEYSLDNLYEGKKVILTP 177 (314)
T ss_dssp GGHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHH---HHGG--GEECEEECC-CCCC-CSGGGCCTTTTTTCEEEECC
T ss_pred HHHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHH---hcCC--CEEecCccc-CCcc-cchhhhhhhhhcCCEEEEEe
Confidence 9999999999999999999999998863 33433 3333 899999943 2210 00011122223567899999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCCCeeecChhHH
Q 021218 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQE 297 (316)
Q Consensus 266 ~~d~~~~a~e~a~~l~~alG~~~~~~tT~~~e 297 (316)
.+..++++++.++.+++.+| .+++.++.++|
T Consensus 178 ~~~~~~~~~~~v~~l~~~~G-~~v~~~~~~~h 208 (314)
T 3ggo_A 178 TKKTDKKRLKLVKRVWEDVG-GVVEYMSPELH 208 (314)
T ss_dssp CTTSCHHHHHHHHHHHHHTT-CEEEECCHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcC-CEEEEcCHHHH
Confidence 99999999999999999999 57888888887
No 5
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.82 E-value=5.8e-20 Score=171.08 Aligned_cols=156 Identities=17% Similarity=0.126 Sum_probs=127.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc---EEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~---~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~ 188 (316)
++|+|||+|+||.+++++|.+. |+ +|.+++++.++..+.+.+.|+.. ..++.++++++|+||+++||
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~------g~~~~~V~v~dr~~~~~~~l~~~~gi~~----~~~~~~~~~~aDvVilav~p 73 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIAN------GYDPNRICVTNRSLDKLDFFKEKCGVHT----TQDNRQGALNADVVVLAVKP 73 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHT------TCCGGGEEEECSSSHHHHHHHHTTCCEE----ESCHHHHHSSCSEEEECSCG
T ss_pred CEEEEEcccHHHHHHHHHHHHC------CCCCCeEEEEeCCHHHHHHHHHHcCCEE----eCChHHHHhcCCeEEEEeCH
Confidence 7999999999999999999998 87 78777776554333444458763 45888999999999999999
Q ss_pred chHHHHHHHHHhc-CCCCcEEE-EeCCchhhhhhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEeec
Q 021218 189 AAQADNYEKIFSC-MKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (316)
Q Consensus 189 ~~~~~vi~ei~~~-mk~gaiLi-d~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~ 266 (316)
+...++++++.++ ++++++|+ +++|+++..++. .++.+.+++++|||+|... | .|+.. +++.
T Consensus 74 ~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~l~~---~l~~~~~vvr~mPn~p~~v-------~-----~g~~~-l~~~ 137 (280)
T 3tri_A 74 HQIKMVCEELKDILSETKILVISLAVGVTTPLIEK---WLGKASRIVRAMPNTPSSV-------R-----AGATG-LFAN 137 (280)
T ss_dssp GGHHHHHHHHHHHHHTTTCEEEECCTTCCHHHHHH---HHTCCSSEEEEECCGGGGG-------T-----CEEEE-EECC
T ss_pred HHHHHHHHHHHhhccCCCeEEEEecCCCCHHHHHH---HcCCCCeEEEEecCChHHh-------c-----CccEE-EEeC
Confidence 9999999999988 88887655 789999888776 5566788999999999876 3 45655 7888
Q ss_pred cCCCHHHHHHHHHHHHHcCCCCeeecChh
Q 021218 267 QDVDGRATNVALGWSVALGSPFTFATTLE 295 (316)
Q Consensus 267 ~d~~~~a~e~a~~l~~alG~~~~~~tT~~ 295 (316)
++++++..+.++.+++.+|. ++....|
T Consensus 138 ~~~~~~~~~~v~~l~~~iG~--~~~v~~E 164 (280)
T 3tri_A 138 ETVDKDQKNLAESIMRAVGL--VIWVSSE 164 (280)
T ss_dssp TTSCHHHHHHHHHHHGGGEE--EEECSSH
T ss_pred CCCCHHHHHHHHHHHHHCCC--eEEECCH
Confidence 89999999999999999994 4444333
No 6
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.80 E-value=1.4e-19 Score=174.15 Aligned_cols=171 Identities=13% Similarity=0.099 Sum_probs=130.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhcc----CCEEEEccc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG----SDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~----ADIViLavp 187 (316)
++|+|||+|+||.++|++|++. |++|+++++ ++...+.+.+.|+.. ..++++++++ +|+||+|+|
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~------G~~V~~~dr-~~~~~~~a~~~G~~~----~~~~~e~~~~a~~~aDlVilavP 77 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA------NHSVFGYNR-SRSGAKSAVDEGFDV----SADLEATLQRAAAEDALIVLAVP 77 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEECS-CHHHHHHHHHTTCCE----ESCHHHHHHHHHHTTCEEEECSC
T ss_pred CEEEEEeecHHHHHHHHHHHHC------CCEEEEEeC-CHHHHHHHHHcCCee----eCCHHHHHHhcccCCCEEEEeCC
Confidence 7899999999999999999999 988766654 455677788888753 4577777764 799999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEeCCchhhhhhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEeecc
Q 021218 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~gaiLid~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~ 267 (316)
++...++++++.++ +++++|+|+++++...++.....++ +..||..||. .|++. ..+..+....+.|.++++||.+
T Consensus 78 ~~~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~~~~-~~~~v~~HPm-aG~e~-sG~~aa~~~Lf~g~~~iltp~~ 153 (341)
T 3ktd_A 78 MTAIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKARNM-QHRYVGSHPM-AGTAN-SGWSASMDGLFKRAVWVVTFDQ 153 (341)
T ss_dssp HHHHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHHTTC-GGGEECEEEC-CSCC--CCGGGCCSSTTTTCEEEECCGG
T ss_pred HHHHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHHhCC-CCcEecCCcc-ccccc-cchhhhhhHHhcCCeEEEEeCC
Confidence 98888899988886 8999999999987543222111334 5789999993 33321 1122233344556899999999
Q ss_pred CCCHH--------HHHHHHHHHHHcCCCCeeecChhHHH
Q 021218 268 DVDGR--------ATNVALGWSVALGSPFTFATTLEQEY 298 (316)
Q Consensus 268 d~~~~--------a~e~a~~l~~alG~~~~~~tT~~~e~ 298 (316)
+.+++ +++.++.+++.+| .+++.++.++|=
T Consensus 154 ~~~~e~~~~~~~~~~~~v~~l~~~~G-a~v~~~~~~~HD 191 (341)
T 3ktd_A 154 LFDGTDINSTWISIWKDVVQMALAVG-AEVVPSRVGPHD 191 (341)
T ss_dssp GTSSCCCCHHHHHHHHHHHHHHHHTT-CEEEECCHHHHH
T ss_pred CCChhhhccchHHHHHHHHHHHHHcC-CEEEEeCHHHHH
Confidence 88888 9999999999999 468888998884
No 7
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.80 E-value=2.2e-19 Score=162.90 Aligned_cols=154 Identities=21% Similarity=0.280 Sum_probs=123.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc----EEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEccc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI----VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~----~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp 187 (316)
++|+|||+|+||.+++++|.+. |+ +|.+++++.++..+.+.+.|+.. ..++.++++++|+||+++|
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~------g~~~~~~V~~~~r~~~~~~~~~~~~g~~~----~~~~~e~~~~aDvVilav~ 72 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK------NIVSSNQIICSDLNTANLKNASEKYGLTT----TTDNNEVAKNADILILSIK 72 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TSSCGGGEEEECSCHHHHHHHHHHHCCEE----CSCHHHHHHHCSEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhC------CCCCCCeEEEEeCCHHHHHHHHHHhCCEE----eCChHHHHHhCCEEEEEeC
Confidence 7899999999999999999998 87 78777665443333334567764 5688899999999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEE-EeCCchhhhhhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEeec
Q 021218 188 DAAQADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~gaiLi-d~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~ 266 (316)
++...++++++.++++++++|+ +++|++...++. .++.+.++++.|||.|... + +|.. .+++.
T Consensus 73 ~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~~l~~---~~~~~~~~v~~~p~~p~~~-------~-----~g~~-~~~~~ 136 (247)
T 3gt0_A 73 PDLYASIINEIKEIIKNDAIIVTIAAGKSIESTEN---AFNKKVKVVRVMPNTPALV-------G-----EGMS-ALCPN 136 (247)
T ss_dssp TTTHHHHC---CCSSCTTCEEEECSCCSCHHHHHH---HHCSCCEEEEEECCGGGGG-------T-----CEEE-EEEEC
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEecCCCCHHHHHH---HhCCCCcEEEEeCChHHHH-------c-----CceE-EEEeC
Confidence 9999999999999999998766 889998877765 4456788999999998876 3 3454 48888
Q ss_pred cCCCHHHHHHHHHHHHHcCCCCeeecC
Q 021218 267 QDVDGRATNVALGWSVALGSPFTFATT 293 (316)
Q Consensus 267 ~d~~~~a~e~a~~l~~alG~~~~~~tT 293 (316)
+..+++..+.++.+++.+|. ++..+
T Consensus 137 ~~~~~~~~~~~~~l~~~~G~--~~~~~ 161 (247)
T 3gt0_A 137 EMVTEKDLEDVLNIFNSFGQ--TEIVS 161 (247)
T ss_dssp TTCCHHHHHHHHHHHGGGEE--EEECC
T ss_pred CCCCHHHHHHHHHHHHhCCC--EEEeC
Confidence 88999999999999999995 55554
No 8
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.72 E-value=3.2e-17 Score=151.11 Aligned_cols=168 Identities=13% Similarity=0.083 Sum_probs=125.9
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCch
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~ 190 (316)
|++|+|||+|+||.++|++|.+. |.+++|++.++ ++...+.+.+.|... ....+++++++++|+||+++|++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~----g~~~~V~~~d~-~~~~~~~~~~~g~~~--~~~~~~~~~~~~aDvVilavp~~~ 78 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD----HPHYKIVGYNR-SDRSRDIALERGIVD--EATADFKVFAALADVIILAVPIKK 78 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----CTTSEEEEECS-SHHHHHHHHHTTSCS--EEESCTTTTGGGCSEEEECSCHHH
T ss_pred cceEEEEeeCHHHHHHHHHHHhC----CCCcEEEEEcC-CHHHHHHHHHcCCcc--cccCCHHHhhcCCCEEEEcCCHHH
Confidence 38999999999999999999876 22357665554 444455566677631 013467788899999999999999
Q ss_pred HHHHHHHHHhc-CCCCcEEEEeCCchh---hhhhccccCCCC-CccEEEeccC------CCchhhHHHHhcCccccCCCc
Q 021218 191 QADNYEKIFSC-MKPNSILGLSHGFLL---GHLQSMGLDFPK-NIGVIAVCPK------GMGPSVRRLYVQGKEINGAGI 259 (316)
Q Consensus 191 ~~~vi~ei~~~-mk~gaiLid~aGv~l---~~l~~~~~~~~~-~i~vI~vhPn------~pg~~~r~lf~~G~e~~G~G~ 259 (316)
..++++++.++ ++++++|+++++++. ..+.. .++. .++++..||. +|+....++| .|.
T Consensus 79 ~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~---~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l~--------~g~ 147 (290)
T 3b1f_A 79 TIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEY---YLKDKPVQFVGSHPMAGSHKSGAVAANVNLF--------ENA 147 (290)
T ss_dssp HHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHH---HHTTSSCEEEEEEEC-----CCTTSCCTTTT--------TTS
T ss_pred HHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHH---hccccCCEEEEeCCcCCCCcchHHHhhHHHh--------CCC
Confidence 98899999999 999999999888764 34443 3343 6789999996 4444322232 357
Q ss_pred eEEEeeccCCCHHHHHHHHHHHHHcCCCCeeecChhHH
Q 021218 260 NSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQE 297 (316)
Q Consensus 260 ~~iiap~~d~~~~a~e~a~~l~~alG~~~~~~tT~~~e 297 (316)
+++++|+...+++..+.++++++.+|. +++.++.++|
T Consensus 148 ~~~~~~~~~~~~~~~~~v~~l~~~~G~-~~~~~~~~~~ 184 (290)
T 3b1f_A 148 YYIFSPSCLTKPNTIPALQDLLSGLHA-RYVEIDAAEH 184 (290)
T ss_dssp EEEEEECTTCCTTHHHHHHHHTGGGCC-EEEECCHHHH
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHcCC-EEEEcCHHHH
Confidence 788999988889999999999999995 5666676665
No 9
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.72 E-value=3.9e-17 Score=149.94 Aligned_cols=170 Identities=13% Similarity=0.062 Sum_probs=122.6
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhc-cCCEEEEccc
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLLIS 187 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~-~ADIViLavp 187 (316)
|++|+|||+|+||.++|+.|++. |+ +|++.++ +++..+.+.+.|+.. ....+++++++ ++|+|++|+|
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~------g~~~~V~~~d~-~~~~~~~~~~~g~~~--~~~~~~~~~~~~~aDvVilavp 71 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRS------GFKGKIYGYDI-NPESISKAVDLGIID--EGTTSIAKVEDFSPDFVMLSSP 71 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHT------TCCSEEEEECS-CHHHHHHHHHTTSCS--EEESCGGGGGGTCCSEEEECSC
T ss_pred CcEEEEEecCHHHHHHHHHHHhc------CCCcEEEEEeC-CHHHHHHHHHCCCcc--cccCCHHHHhcCCCCEEEEcCC
Confidence 58999999999999999999998 87 7766554 444556677778641 01346778899 9999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEeCCchhh---hhhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEe
Q 021218 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~gaiLid~aGv~l~---~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iia 264 (316)
++...++++++.++++++++|+++++++.. .+.+ .+++ .++..||... .+..+ ........+.|.+++++
T Consensus 72 ~~~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~---~l~~--~~v~~~p~~~-~~~~g-p~~a~~~l~~g~~~~~~ 144 (281)
T 2g5c_A 72 VRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLEN---ILGK--RFVGGHPIAG-TEKSG-VEYSLDNLYEGKKVILT 144 (281)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHH---HHGG--GEECEEEECC-CSCCS-GGGCCSSTTTTCEEEEC
T ss_pred HHHHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHH---hccc--cceeeccccC-CccCC-hhhhhhHHhCCCCEEEe
Confidence 999889999999999999999998877532 2333 2333 2777777321 10000 00011112356788899
Q ss_pred eccCCCHHHHHHHHHHHHHcCCCCeeecChhHH
Q 021218 265 VHQDVDGRATNVALGWSVALGSPFTFATTLEQE 297 (316)
Q Consensus 265 p~~d~~~~a~e~a~~l~~alG~~~~~~tT~~~e 297 (316)
|+...++++.+.++++++.+|. +++.++.++|
T Consensus 145 ~~~~~~~~~~~~v~~l~~~~g~-~~~~~~~~~~ 176 (281)
T 2g5c_A 145 PTKKTDKKRLKLVKRVWEDVGG-VVEYMSPELH 176 (281)
T ss_dssp CCSSSCHHHHHHHHHHHHHTTC-EEEECCHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHcCC-EEEEcCHHHH
Confidence 9988999999999999999995 5666676665
No 10
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.69 E-value=1.8e-16 Score=149.66 Aligned_cols=152 Identities=14% Similarity=0.105 Sum_probs=118.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC----cEEEEEecCCc-ccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD----IVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G----~~Vivg~r~~~-~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLav 186 (316)
|+|+|||+|+||.++|.+|.+. | ++|.+.+|+.+ ...+...+.|+.. ..+..++++++|+||+++
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~------G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~----~~~~~e~~~~aDvVilav 92 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAA------GVLAAHKIMASSPDMDLATVSALRKMGVKL----TPHNKETVQHSDVLFLAV 92 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHT------TSSCGGGEEEECSCTTSHHHHHHHHHTCEE----ESCHHHHHHHCSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCCcceEEEECCCccHHHHHHHHHcCCEE----eCChHHHhccCCEEEEEe
Confidence 7899999999999999999998 8 67877776543 2444555668764 357888999999999999
Q ss_pred cCchHHHHHHHHHhcCCCCcEEEEe-CCchhhhhhcc-ccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEe
Q 021218 187 SDAAQADNYEKIFSCMKPNSILGLS-HGFLLGHLQSM-GLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (316)
Q Consensus 187 p~~~~~~vi~ei~~~mk~gaiLid~-aGv~l~~l~~~-~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iia 264 (316)
|++...++++++.+.++++++|+++ .|+....+++. ...++ +.++++.|||.|... + .|. .+++
T Consensus 93 ~~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~~~~-~~~vv~~~p~~p~~~-------~-----~g~-~v~~ 158 (322)
T 2izz_A 93 KPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRP-APRVIRCMTNTPVVV-------R-----EGA-TVYA 158 (322)
T ss_dssp CGGGHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHTTSS-CCEEEEEECCGGGGG-------T-----CEE-EEEE
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhhcCC-CCeEEEEeCCcHHHH-------c-----CCe-EEEE
Confidence 9998889999999999999998876 57776544431 01122 458999999988765 2 344 4567
Q ss_pred eccCCCHHHHHHHHHHHHHcCCC
Q 021218 265 VHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 265 p~~d~~~~a~e~a~~l~~alG~~ 287 (316)
+.++.+++..+.++.+++.+|..
T Consensus 159 ~g~~~~~~~~~~v~~ll~~~G~~ 181 (322)
T 2izz_A 159 TGTHAQVEDGRLMEQLLSSVGFC 181 (322)
T ss_dssp ECTTCCHHHHHHHHHHHHTTEEE
T ss_pred eCCCCCHHHHHHHHHHHHhCCCE
Confidence 77777889999999999999953
No 11
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.67 E-value=1.2e-15 Score=141.03 Aligned_cols=162 Identities=17% Similarity=0.116 Sum_probs=119.6
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCc
Q 021218 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (316)
Q Consensus 111 ~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~ 189 (316)
|++|+|||+ |+||.++|++|.+. |++|++.+++ ++..+...+.|+. ..+..++++++|+||+++|++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~------g~~V~~~~r~-~~~~~~~~~~g~~-----~~~~~~~~~~aDvVi~av~~~ 78 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS------AHHLAAIEIA-PEGRDRLQGMGIP-----LTDGDGWIDEADVVVLALPDN 78 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS------SSEEEEECCS-HHHHHHHHHTTCC-----CCCSSGGGGTCSEEEECSCHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC------CCEEEEEECC-HHHHHHHHhcCCC-----cCCHHHHhcCCCEEEEcCCch
Confidence 479999999 99999999999998 9888766654 3444455556754 236678899999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEEEeC-CchhhhhhccccCCCCCccEEEeccCCCchhh----HHHHhcCccccCCC------
Q 021218 190 AQADNYEKIFSCMKPNSILGLSH-GFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSV----RRLYVQGKEINGAG------ 258 (316)
Q Consensus 190 ~~~~vi~ei~~~mk~gaiLid~a-Gv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~----r~lf~~G~e~~G~G------ 258 (316)
...++++++.+.++++++|++.+ |.....++. . ..+..|++.||+.++.-. .+.+ .|
T Consensus 79 ~~~~v~~~l~~~l~~~~ivv~~s~~~~~~~l~~---~-~~~~~~v~~~P~~~~~~~~~~~~~~~--------~g~l~~~~ 146 (286)
T 3c24_A 79 IIEKVAEDIVPRVRPGTIVLILDAAAPYAGVMP---E-RADITYFIGHPCHPPLFNDETDPAAR--------TDYHGGIA 146 (286)
T ss_dssp HHHHHHHHHGGGSCTTCEEEESCSHHHHHTCSC---C-CTTSEEEEEEECCSCSSCCCCSHHHH--------TCSSSSSS
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCCchhHHHHh---h-hCCCeEEecCCCCccccccccchhhc--------cCcccccc
Confidence 98889999999999999998754 444444442 2 346889999999876610 0111 33
Q ss_pred -ceEEEeeccCCCHHHHHHHHHHHHHcCCC--CeeecChhHH
Q 021218 259 -INSSFAVHQDVDGRATNVALGWSVALGSP--FTFATTLEQE 297 (316)
Q Consensus 259 -~~~iiap~~d~~~~a~e~a~~l~~alG~~--~~~~tT~~~e 297 (316)
..+++++.. .+++..+.++.+++.+|.+ +++.++.++|
T Consensus 147 ~~~~i~~~~~-~~~~~~~~v~~l~~~~G~~~~~~~~v~~~~~ 187 (286)
T 3c24_A 147 KQAIVCALMQ-GPEEHYAIGADICETMWSPVTRTHRVTTEQL 187 (286)
T ss_dssp CEEEEEEEEE-SCTHHHHHHHHHHHHHTCSEEEEEECCHHHH
T ss_pred cceeeeeccC-CCHHHHHHHHHHHHHhcCCcceEEEeChhHh
Confidence 355445444 6778999999999999974 5777775443
No 12
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.67 E-value=4.7e-16 Score=140.85 Aligned_cols=148 Identities=12% Similarity=0.176 Sum_probs=117.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC----cEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEccc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD----IVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G----~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp 187 (316)
++|+|||+|+||.++|++|.+. | ++|.+++++.++ .|+.. ..+..++++++|+||+++|
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~------g~~~~~~v~~~~~~~~~-------~g~~~----~~~~~~~~~~~D~vi~~v~ 67 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA------NIIKKENLFYYGPSKKN-------TTLNY----MSSNEELARHCDIIVCAVK 67 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH------TSSCGGGEEEECSSCCS-------SSSEE----CSCHHHHHHHCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCCCCCeEEEEeCCccc-------CceEE----eCCHHHHHhcCCEEEEEeC
Confidence 7899999999999999999988 8 678777766443 56653 4578888999999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEeCCchhhhhhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEeecc
Q 021218 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~gaiLid~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~ 267 (316)
++...++++++.++++++.+|+++.|+....++. .++.+.++++.+|+.|... + .| ..++++.+
T Consensus 68 ~~~~~~v~~~l~~~l~~~~vv~~~~gi~~~~l~~---~~~~~~~~v~~~p~~p~~~-------~-----~g-~~~~~~~~ 131 (262)
T 2rcy_A 68 PDIAGSVLNNIKPYLSSKLLISICGGLNIGKLEE---MVGSENKIVWVMPNTPCLV-------G-----EG-SFIYCSNK 131 (262)
T ss_dssp TTTHHHHHHHSGGGCTTCEEEECCSSCCHHHHHH---HHCTTSEEEEEECCGGGGG-------T-----CE-EEEEEECT
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHH---HhCCCCcEEEECCChHHHH-------c-----CC-eEEEEeCC
Confidence 9988889999988885555667899998776665 3455557888899887665 3 56 56688887
Q ss_pred CCCHHHHHHHHHHHHHcCCCCeeecCh
Q 021218 268 DVDGRATNVALGWSVALGSPFTFATTL 294 (316)
Q Consensus 268 d~~~~a~e~a~~l~~alG~~~~~~tT~ 294 (316)
+.+++..+.++.+++.+|. ++..+.
T Consensus 132 ~~~~~~~~~~~~ll~~~G~--~~~~~~ 156 (262)
T 2rcy_A 132 NVNSTDKKYVNDIFNSCGI--IHEIKE 156 (262)
T ss_dssp TCCHHHHHHHHHHHHTSEE--EEECCG
T ss_pred CCCHHHHHHHHHHHHhCCC--EEEeCH
Confidence 7889999999999999994 666653
No 13
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.67 E-value=3.4e-17 Score=165.45 Aligned_cols=176 Identities=18% Similarity=0.152 Sum_probs=130.3
Q ss_pred cccchhhHHhhcCCccc-cccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCce
Q 021218 85 SLADRDEYIVRGGRDLF-NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFT 163 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~F-~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~ 163 (316)
++..+++.+ ++|+|.- .+...+|.| ++|||||+|+||+++|+.|+++ |++|+++++.. ..+.+.+.|+.
T Consensus 117 ~~~~~~~~~-~~g~w~~~~~~~~~l~g-~~vgIIG~G~IG~~vA~~l~~~------G~~V~~~d~~~--~~~~a~~~g~~ 186 (529)
T 1ygy_A 117 QIPAADASL-REHTWKRSSFSGTEIFG-KTVGVVGLGRIGQLVAQRIAAF------GAYVVAYDPYV--SPARAAQLGIE 186 (529)
T ss_dssp THHHHHHHH-HTTCCCGGGCCBCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECTTS--CHHHHHHHTCE
T ss_pred hhHHHHHHH-HhCCCcccCcCccccCC-CEEEEEeeCHHHHHHHHHHHhC------CCEEEEECCCC--ChhHHHhcCcE
Confidence 456677775 9999953 223578999 9999999999999999999999 99887766543 34556777876
Q ss_pred ecCCCcCCHHhhhccCCEEEEcccCchH-HHHHH-HHHhcCCCCcEEEEeCCch---h----hhhhccccCCCCCccEEE
Q 021218 164 EENGTLGDIYETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSHGFL---L----GHLQSMGLDFPKNIGVIA 234 (316)
Q Consensus 164 ~~~~t~~~~~e~i~~ADIViLavp~~~~-~~vi~-ei~~~mk~gaiLid~aGv~---l----~~l~~~~~~~~~~i~vI~ 234 (316)
. .++++++++||+|++|+|++.. ..+++ ++++.||+|++|++++-.. . ..+.+ +..-...++|+.
T Consensus 187 ~-----~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~-g~i~ga~lDv~~ 260 (529)
T 1ygy_A 187 L-----LSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITG-GHVRAAGLDVFA 260 (529)
T ss_dssp E-----CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHT-SSEEEEEESSCS
T ss_pred E-----cCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHc-CCccEEEEeecc
Confidence 3 3789999999999999999954 45776 4889999999999876321 1 12222 111112467888
Q ss_pred eccCCCchhhHHHHhcCccccCCCceEEEeeccC-CCHHHHHH-----HHHHHHHcCCCC
Q 021218 235 VCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNV-----ALGWSVALGSPF 288 (316)
Q Consensus 235 vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~d-~~~~a~e~-----a~~l~~alG~~~ 288 (316)
.||. +. ..||.. .|+++|||.. .+.++++. +++++..++...
T Consensus 261 ~eP~-~~---~~L~~~--------~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~~ 308 (529)
T 1ygy_A 261 TEPC-TD---SPLFEL--------AQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEF 308 (529)
T ss_dssp SSSC-SC---CGGGGC--------TTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCC-CC---chHHhC--------CCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9993 32 235653 5899999998 78888875 788999998753
No 14
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.66 E-value=3e-16 Score=148.92 Aligned_cols=167 Identities=16% Similarity=0.111 Sum_probs=120.5
Q ss_pred cccchhhHHhhcCCccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCcee
Q 021218 85 SLADRDEYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE 164 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~F~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~ 164 (316)
++..|++.+ |+|+|.. ....++.| ++|||||+|.||.++|+.++.+ |++|++.++..++ ..+.+.|+..
T Consensus 119 ~~~~~~~~~-~~g~w~~-~~~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~~ 187 (313)
T 2ekl_A 119 KMYTSMALA-KSGIFKK-IEGLELAG-KTIGIVGFGRIGTKVGIIANAM------GMKVLAYDILDIR--EKAEKINAKA 187 (313)
T ss_dssp THHHHHHHH-HTTCCCC-CCCCCCTT-CEEEEESCSHHHHHHHHHHHHT------TCEEEEECSSCCH--HHHHHTTCEE
T ss_pred CHHHHHHHH-HcCCCCC-CCCCCCCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCCcch--hHHHhcCcee
Confidence 456677775 9999962 23579999 9999999999999999999999 9998777665433 2466778762
Q ss_pred cCCCcCCHHhhhccCCEEEEcccCchHHH-HH-HHHHhcCCCCcEEEEeCCch-------hhhhhccccCCCCCccEEEe
Q 021218 165 ENGTLGDIYETISGSDLVLLLISDAAQAD-NY-EKIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVIAV 235 (316)
Q Consensus 165 ~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi-~ei~~~mk~gaiLid~aGv~-------l~~l~~~~~~~~~~i~vI~v 235 (316)
.++++++++||+|++|+|.+..++ ++ ++.++.||+|++|++++.-. ...+++ +..-...++|+..
T Consensus 188 -----~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~-g~i~ga~lDv~~~ 261 (313)
T 2ekl_A 188 -----VSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKK-GKVYAYATDVFWN 261 (313)
T ss_dssp -----CCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHT-TCEEEEEESCCSS
T ss_pred -----cCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHc-CCCcEEEEecCCC
Confidence 378999999999999999988654 67 47888999999999876432 122322 1111234678889
Q ss_pred ccCCCchhhHHHHhcCccccCCCceEEEeeccC-CCHHHHHHH
Q 021218 236 CPKGMGPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNVA 277 (316)
Q Consensus 236 hPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~d-~~~~a~e~a 277 (316)
||. +......||.. -|+++|||.. .+.++.+.+
T Consensus 262 eP~-~~~~~~~L~~~--------~nviltPH~~~~t~~~~~~~ 295 (313)
T 2ekl_A 262 EPP-KEEWELELLKH--------ERVIVTTHIGAQTKEAQKRV 295 (313)
T ss_dssp SSC-CSHHHHHHHHS--------TTEEECCSCTTCSHHHHHHH
T ss_pred CCC-CCcccchHhhC--------CCEEECCccCcCcHHHHHHH
Confidence 994 34433467764 5899999864 445554443
No 15
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.66 E-value=6.6e-16 Score=140.40 Aligned_cols=162 Identities=20% Similarity=0.166 Sum_probs=113.0
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcc--------------cHHHHHHCCceecCCCcC
Q 021218 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR--------------SFAEARAAGFTEENGTLG 170 (316)
Q Consensus 105 ~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~--------------s~~~A~~~G~~~~~~t~~ 170 (316)
..++.+ ++|||||+|+||.++|++|.+. |++|++++|+.++ ..+.+.+.|... ..
T Consensus 14 ~~~~~~-~kIgiIG~G~mG~alA~~L~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 82 (245)
T 3dtt_A 14 NLYFQG-MKIAVLGTGTVGRTMAGALADL------GHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH----LA 82 (245)
T ss_dssp -----C-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE----EE
T ss_pred ccccCC-CeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee----cc
Confidence 578889 9999999999999999999999 9998888776433 112222334332 45
Q ss_pred CHHhhhccCCEEEEcccCchHHHHHHHH-HhcCCCCcEEEEeC-Cc-----------------hhhhhhccccCCCCCcc
Q 021218 171 DIYETISGSDLVLLLISDAAQADNYEKI-FSCMKPNSILGLSH-GF-----------------LLGHLQSMGLDFPKNIG 231 (316)
Q Consensus 171 ~~~e~i~~ADIViLavp~~~~~~vi~ei-~~~mk~gaiLid~a-Gv-----------------~l~~l~~~~~~~~~~i~ 231 (316)
++.|++++||+||+++|++...+++.++ .+.+ ++++|++++ |+ ..+.+++ .+| +.+
T Consensus 83 ~~~e~~~~aDvVilavp~~~~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~---~l~-~~~ 157 (245)
T 3dtt_A 83 AFADVAAGAELVVNATEGASSIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQR---TFP-EAK 157 (245)
T ss_dssp EHHHHHHHCSEEEECSCGGGHHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHH---HST-TSE
T ss_pred CHHHHHhcCCEEEEccCcHHHHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHH---HCC-CCe
Confidence 7889999999999999999999988888 7777 899999876 22 1234554 455 479
Q ss_pred EEEeccCCCchhhHHHHhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCCCe
Q 021218 232 VIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT 289 (316)
Q Consensus 232 vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~~~ 289 (316)
+|+.+|+.+++...+.-.. -.|...++...+ ++++.+.++.+++.+|+..+
T Consensus 158 vv~~~~~~~a~v~~~~~~a-----~~g~~~~~v~g~--d~~~~~~v~~ll~~~g~~~~ 208 (245)
T 3dtt_A 158 VVKTLNTMNASLMVDPGRA-----AGGDHSVFVSGN--DAAAKAEVATLLKSLGHQDV 208 (245)
T ss_dssp EEECSTTSCHHHHHCGGGT-----GGGCCCEEEECS--CHHHHHHHHHHHHHTTCCCE
T ss_pred EEEeecccCHHHhcCcccc-----CCCCeeEEEECC--CHHHHHHHHHHHHHcCCCce
Confidence 9999999999885221100 012222232222 57899999999999998653
No 16
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.65 E-value=1.1e-15 Score=142.80 Aligned_cols=147 Identities=16% Similarity=0.133 Sum_probs=113.4
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCch
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~ 190 (316)
++|+||| +|+||.++|+.|++. |++|++.+++.. .+..+++++||+||+|+|++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~------G~~V~~~~~~~~------------------~~~~~~~~~aDvVilavp~~~ 77 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS------GYPISILDREDW------------------AVAESILANADVVIVSVPINL 77 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT------TCCEEEECTTCG------------------GGHHHHHTTCSEEEECSCGGG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC------CCeEEEEECCcc------------------cCHHHHhcCCCEEEEeCCHHH
Confidence 7999999 999999999999998 988877765422 145678899999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEeCCchhhhhhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEeeccCCC
Q 021218 191 QADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVD 270 (316)
Q Consensus 191 ~~~vi~ei~~~mk~gaiLid~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~d~~ 270 (316)
..++++++.++++++++|+|+++++...++......+ .+++..||. .+++. . ...|.+++++|+. +
T Consensus 78 ~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~~--~~~v~~hP~-~g~~~-~--------~~~g~~~~l~~~~--~ 143 (298)
T 2pv7_A 78 TLETIERLKPYLTENMLLADLTSVKREPLAKMLEVHT--GAVLGLHPM-FGADI-A--------SMAKQVVVRCDGR--F 143 (298)
T ss_dssp HHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHHCS--SEEEEEEEC-SCTTC-S--------CCTTCEEEEEEEE--C
T ss_pred HHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHhcC--CCEEeeCCC-CCCCc-h--------hhcCCeEEEecCC--C
Confidence 9999999999999999999999987543332111222 579999993 33331 1 1235678899876 6
Q ss_pred HHHHHHHHHHHHHcCCCCeeecChhHH
Q 021218 271 GRATNVALGWSVALGSPFTFATTLEQE 297 (316)
Q Consensus 271 ~~a~e~a~~l~~alG~~~~~~tT~~~e 297 (316)
+++.+.++++++.+|. +++.++.++|
T Consensus 144 ~~~~~~v~~l~~~~G~-~~~~~~~~~~ 169 (298)
T 2pv7_A 144 PERYEWLLEQIQIWGA-KIYQTNATEH 169 (298)
T ss_dssp GGGTHHHHHHHHHTTC-EEEECCHHHH
T ss_pred HHHHHHHHHHHHHcCC-EEEECCHHHH
Confidence 7889999999999995 5677777765
No 17
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.63 E-value=4.8e-15 Score=135.63 Aligned_cols=170 Identities=15% Similarity=0.131 Sum_probs=118.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCchH
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~~ 191 (316)
|+|+|||+|+||.++++.|.+. |++|++.+++ ++..+.+.+.|... ....+++++ +++|+|++++|++..
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~-~~~~~~~~~~g~~~--~~~~~~~~~-~~~D~vi~av~~~~~ 70 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR------GHYLIGVSRQ-QSTCEKAVERQLVD--EAGQDLSLL-QTAKIIFLCTPIQLI 70 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTSCS--EEESCGGGG-TTCSEEEECSCHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHC------CCEEEEEECC-HHHHHHHHhCCCCc--cccCCHHHh-CCCCEEEEECCHHHH
Confidence 5899999999999999999998 8887766544 44455566677631 013467788 999999999999988
Q ss_pred HHHHHHHHhcCCCCcEEEEeCCchhhhhhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEeeccCCCH
Q 021218 192 ADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDG 271 (316)
Q Consensus 192 ~~vi~ei~~~mk~gaiLid~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~d~~~ 271 (316)
.++++++.++++++++|+++++++...++.....++ +++..||.. +.+..+ ........+.|.++++++....++
T Consensus 71 ~~~~~~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~---~~~~~~p~~-g~~~~g-p~~a~~~~~~g~~~~~~~~~~~~~ 145 (279)
T 2f1k_A 71 LPTLEKLIPHLSPTAIVTDVASVKTAIAEPASQLWS---GFIGGHPMA-GTAAQG-IDGAEENLFVNAPYVLTPTEYTDP 145 (279)
T ss_dssp HHHHHHHGGGSCTTCEEEECCSCCHHHHHHHHHHST---TCEEEEECC-CCSCSS-GGGCCTTTTTTCEEEEEECTTCCH
T ss_pred HHHHHHHHhhCCCCCEEEECCCCcHHHHHHHHHHhC---CEeecCccc-CCccCC-HHHHhHHHhCCCcEEEecCCCCCH
Confidence 889999999999999999988776433332111222 677788832 111000 000111122456788999888889
Q ss_pred HHHHHHHHHHHHcCCCCeeecChhHH
Q 021218 272 RATNVALGWSVALGSPFTFATTLEQE 297 (316)
Q Consensus 272 ~a~e~a~~l~~alG~~~~~~tT~~~e 297 (316)
+..+.++++++.+|. +++.++.++|
T Consensus 146 ~~~~~v~~l~~~~g~-~~~~~~~~~~ 170 (279)
T 2f1k_A 146 EQLACLRSVLEPLGV-KIYLCTPADH 170 (279)
T ss_dssp HHHHHHHHHHGGGTC-EEEECCHHHH
T ss_pred HHHHHHHHHHHHcCC-EEEEcCHHHH
Confidence 999999999999995 4555554443
No 18
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.63 E-value=7.3e-16 Score=147.96 Aligned_cols=164 Identities=16% Similarity=0.090 Sum_probs=119.0
Q ss_pred cccchhhHHhhcCCccc-cccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCce
Q 021218 85 SLADRDEYIVRGGRDLF-NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFT 163 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~F-~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~ 163 (316)
++..|++.+ |+|+|.. .+...+|.| ++|||||+|.||.++|+.++.+ |++|+++++..++ +.+.+.|+.
T Consensus 140 ~~~~~~~~~-~~g~W~~~~~~~~~l~g-~tvgIIGlG~IG~~vA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~ 209 (335)
T 2g76_A 140 QIPQATASM-KDGKWERKKFMGTELNG-KTLGILGLGRIGREVATRMQSF------GMKTIGYDPIISP--EVSASFGVQ 209 (335)
T ss_dssp THHHHHHHH-HTTCCCTGGGCBCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSSCH--HHHHHTTCE
T ss_pred chHHHHHHH-HcCCCCccCCCCcCCCc-CEEEEEeECHHHHHHHHHHHHC------CCEEEEECCCcch--hhhhhcCce
Confidence 456677775 9999953 222579999 9999999999999999999999 9998777665432 356677875
Q ss_pred ecCCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeCCch-------hhhhhccccCCCCCccEEE
Q 021218 164 EENGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVIA 234 (316)
Q Consensus 164 ~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~aGv~-------l~~l~~~~~~~~~~i~vI~ 234 (316)
..++++++++||+|++|+|.+..++ +++ +.++.||+|++|++++... ...+++ +......++|+.
T Consensus 210 -----~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~-g~i~gA~lDV~~ 283 (335)
T 2g76_A 210 -----QLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQS-GQCAGAALDVFT 283 (335)
T ss_dssp -----ECCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHH-TSEEEEEESCCS
T ss_pred -----eCCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHh-CCccEEEEeecC
Confidence 2488999999999999999998654 774 7899999999999876422 223333 111123467888
Q ss_pred eccCCCchhhHHHHhcCccccCCCceEEEeeccC-CCHHHHHH
Q 021218 235 VCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNV 276 (316)
Q Consensus 235 vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~d-~~~~a~e~ 276 (316)
.+| .+. ..||.. -|+++|||.. .+.++.+.
T Consensus 284 ~EP-~~~---~~L~~~--------~nvilTPH~~~~t~e~~~~ 314 (335)
T 2g76_A 284 EEP-PRD---RALVDH--------ENVISCPHLGASTKEAQSR 314 (335)
T ss_dssp SSS-CSC---CHHHHS--------TTEEECSSCTTCBHHHHHH
T ss_pred CCC-CCC---chHHhC--------CCEEECCcCCCCCHHHHHH
Confidence 898 332 346664 5899999863 44555443
No 19
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.63 E-value=8.2e-16 Score=145.52 Aligned_cols=166 Identities=18% Similarity=0.115 Sum_probs=119.5
Q ss_pred cccchhhHHhhcCCccc-cccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCce
Q 021218 85 SLADRDEYIVRGGRDLF-NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFT 163 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~F-~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~ 163 (316)
++..|++.+ |+|+|.- .....+|.| ++|||||+|.||.++|+.++.+ |++|++.++...+ +.+.+.|+.
T Consensus 117 ~~~~~~~~~-~~g~w~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~ 186 (307)
T 1wwk_A 117 KIAFADRKM-REGVWAKKEAMGIELEG-KTIGIIGFGRIGYQVAKIANAL------GMNILLYDPYPNE--ERAKEVNGK 186 (307)
T ss_dssp THHHHHHHH-TTTCCCTTTCCBCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCH--HHHHHTTCE
T ss_pred CHHHHHHHH-HcCCCCccCcCCcccCC-ceEEEEccCHHHHHHHHHHHHC------CCEEEEECCCCCh--hhHhhcCcc
Confidence 355677775 9999952 223579999 9999999999999999999999 9998777665433 456677875
Q ss_pred ecCCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeCCch-------hhhhhccccCCCCCccEEE
Q 021218 164 EENGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVIA 234 (316)
Q Consensus 164 ~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~aGv~-------l~~l~~~~~~~~~~i~vI~ 234 (316)
..++++++++||+|++|+|++..++ +++ +.++.||+|++|++++.-. ...+++ +.......+|+.
T Consensus 187 -----~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~-g~i~ga~lDv~~ 260 (307)
T 1wwk_A 187 -----FVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKE-GWIAGAGLDVFE 260 (307)
T ss_dssp -----ECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHH-TSSSEEEESCCS
T ss_pred -----ccCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHh-CCCcEEEEecCC
Confidence 3478999999999999999988654 664 7889999999999876422 223333 112224577888
Q ss_pred eccCCCchhhHHHHhcCccccCCCceEEEeeccC-CCHHHHHHH
Q 021218 235 VCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNVA 277 (316)
Q Consensus 235 vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~d-~~~~a~e~a 277 (316)
.+|..+.+ .||.. -|+++|||.. .+.++.+.+
T Consensus 261 ~eP~~~~~---~L~~~--------~nviltPh~~~~t~~~~~~~ 293 (307)
T 1wwk_A 261 EEPLPKDH---PLTKF--------DNVVLTPHIGASTVEAQERA 293 (307)
T ss_dssp SSSCCTTC---GGGGC--------TTEEECSSCTTCBHHHHHHH
T ss_pred CCCCCCCC---hHHhC--------CCEEECCccccCcHHHHHHH
Confidence 88843332 35553 5899999874 445554444
No 20
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.61 E-value=6.1e-16 Score=147.22 Aligned_cols=166 Identities=15% Similarity=0.144 Sum_probs=116.3
Q ss_pred cccchhhHHhhcCCcc-cc---ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEec-CCcccHHHHHH
Q 021218 85 SLADRDEYIVRGGRDL-FN---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR-KGSRSFAEARA 159 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~-F~---~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r-~~~~s~~~A~~ 159 (316)
++..+++.+ |+|+|. ++ +...++.| ++|||||+|+||.++|+.++.+ |++|++.++ .... ..+.+
T Consensus 118 ~~~~~~~~~-~~g~w~~~~~~~~~~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~--~~~~~ 187 (320)
T 1gdh_A 118 RAGEGEKMI-RTRSWPGWEPLELVGEKLDN-KTLGIYGFGSIGQALAKRAQGF------DMDIDYFDTHRASS--SDEAS 187 (320)
T ss_dssp THHHHHHHH-HTTCCCCCCTTTTCBCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSCCCH--HHHHH
T ss_pred cHHHHHHHH-HcCCCCccccccccCcCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCCcCh--hhhhh
Confidence 355677775 999995 32 23579999 9999999999999999999999 999877776 4432 34556
Q ss_pred CCceecCCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeCCch-------hhhhhccccCCCCCc
Q 021218 160 AGFTEENGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNI 230 (316)
Q Consensus 160 ~G~~~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~aGv~-------l~~l~~~~~~~~~~i 230 (316)
.|+.. ..++++++++||+|++|+|++..++ +++ +.++.||+|++|++++... ...+++.. ......
T Consensus 188 ~g~~~----~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~-i~gA~l 262 (320)
T 1gdh_A 188 YQATF----HDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGR-LAYAGF 262 (320)
T ss_dssp HTCEE----CSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTS-EEEEEE
T ss_pred cCcEE----cCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCC-CcEEEE
Confidence 67652 3378999999999999999987654 674 6889999999999875422 22233211 112345
Q ss_pred cEEEeccCCCchhhHHHHhcCccccCCCceEEEeeccCC-CHHHHHHH
Q 021218 231 GVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV-DGRATNVA 277 (316)
Q Consensus 231 ~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~d~-~~~a~e~a 277 (316)
+|+..+| .+. ..||.. -|+++|||... +.++.+.+
T Consensus 263 Dv~~~eP-~~~---~~L~~~--------~nviltPH~~~~t~~~~~~~ 298 (320)
T 1gdh_A 263 DVFAGEP-NIN---EGYYDL--------PNTFLFPHIGSAATQAREDM 298 (320)
T ss_dssp SCCTTTT-SCC---TTGGGC--------TTEEECSSCTTCBHHHHHHH
T ss_pred eCCCCCC-CCC---ChhhhC--------CCEEECCcCCcCcHHHHHHH
Confidence 6666777 222 335553 58999998743 45554444
No 21
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.61 E-value=2.8e-15 Score=135.95 Aligned_cols=152 Identities=16% Similarity=0.118 Sum_probs=113.5
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCch
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~ 190 (316)
|++|+|||+|.||.++++.|.+. |++|.+.+++.++..+.+.+.|+.. ..+.+++++++|+|++++|++.
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~------g~~v~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~D~Vi~~v~~~~ 72 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQT------PHELIISGSSLERSKEIAEQLALPY----AMSHQDLIDQVDLVILGIKPQL 72 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTS------SCEEEEECSSHHHHHHHHHHHTCCB----CSSHHHHHHTCSEEEECSCGGG
T ss_pred ccEEEEECCCHHHHHHHHHHHhC------CCeEEEECCCHHHHHHHHHHcCCEe----eCCHHHHHhcCCEEEEEeCcHh
Confidence 58999999999999999999988 8877766655333333333447653 4578899999999999999887
Q ss_pred HHHHHHHHHhcCCCCcEEEEe-CCchhhhhhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEeeccCC
Q 021218 191 QADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV 269 (316)
Q Consensus 191 ~~~vi~ei~~~mk~gaiLid~-aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~d~ 269 (316)
..+++.+ +++|++|++. .|+....++. .++.+.++++.||+.|... + .|. ..+++....
T Consensus 73 ~~~v~~~----l~~~~~vv~~~~~~~~~~l~~---~~~~~~~~v~~~p~~~~~~-------~-----~g~-~~i~~~~~~ 132 (259)
T 2ahr_A 73 FETVLKP----LHFKQPIISMAAGISLQRLAT---FVGQDLPLLRIMPNMNAQI-------L-----QSS-TALTGNALV 132 (259)
T ss_dssp HHHHHTT----SCCCSCEEECCTTCCHHHHHH---HHCTTSCEEEEECCGGGGG-------T-----CEE-EEEEECTTC
T ss_pred HHHHHHH----hccCCEEEEeCCCCCHHHHHH---hcCCCCCEEEEcCCchHHH-------c-----Cce-EEEEcCCCC
Confidence 6666654 4578888866 6787666654 3344568999999887765 2 343 446777778
Q ss_pred CHHHHHHHHHHHHHcCCCCeeecCh
Q 021218 270 DGRATNVALGWSVALGSPFTFATTL 294 (316)
Q Consensus 270 ~~~a~e~a~~l~~alG~~~~~~tT~ 294 (316)
+++..+.++.+++.+| .++..+.
T Consensus 133 ~~~~~~~~~~ll~~~G--~~~~~~~ 155 (259)
T 2ahr_A 133 SQELQARVRDLTDSFG--STFDISE 155 (259)
T ss_dssp CHHHHHHHHHHHHTTE--EEEECCG
T ss_pred CHHHHHHHHHHHHhCC--CEEEecH
Confidence 8999999999999999 4666664
No 22
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.61 E-value=1.1e-14 Score=138.67 Aligned_cols=153 Identities=13% Similarity=0.122 Sum_probs=117.2
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHH-----------HCCceecC----------CCc
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-----------AAGFTEEN----------GTL 169 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~-----------~~G~~~~~----------~t~ 169 (316)
+++|+|||.|+||.++|..+.+. |++|++.+++ ++..+.+. +.|+.... ...
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~------G~~V~l~d~~-~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~ 78 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIE-PRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC 78 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSC-HHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE
T ss_pred CceEEEEeeCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe
Confidence 38999999999999999999999 9998877665 33333332 23422100 014
Q ss_pred CCHHhhhccCCEEEEcccCchHH--HHHHHHHhcCCCCcEEE-EeCCchhhhhhccccCCCCCccEEEeccCCCchhhHH
Q 021218 170 GDIYETISGSDLVLLLISDAAQA--DNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRR 246 (316)
Q Consensus 170 ~~~~e~i~~ADIViLavp~~~~~--~vi~ei~~~mk~gaiLi-d~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~ 246 (316)
.++++++++||+||+++|.+... +++.++.++++++++|+ .++++.+..+.. .++...++++.||+.|.+.
T Consensus 79 ~~~~eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~---~~~~~~r~ig~Hp~~P~~~--- 152 (319)
T 2dpo_A 79 TNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFT---GLAHVKQCIVAHPVNPPYY--- 152 (319)
T ss_dssp CCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHT---TCTTGGGEEEEEECSSTTT---
T ss_pred CCHHHHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHH---hcCCCCCeEEeecCCchhh---
Confidence 58889999999999999987543 48889999999999987 567777777765 4444568999999887754
Q ss_pred HHhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCC
Q 021218 247 LYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 247 lf~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
+ -...+++.+.++++.++.++.+++.+|..
T Consensus 153 ----~-------~lveiv~g~~t~~e~~~~~~~l~~~lGk~ 182 (319)
T 2dpo_A 153 ----I-------PLVELVPHPETSPATVDRTHALMRKIGQS 182 (319)
T ss_dssp ----C-------CEEEEEECTTCCHHHHHHHHHHHHHTTCE
T ss_pred ----c-------ceEEEeCCCCCCHHHHHHHHHHHHHcCCE
Confidence 2 24568899999999999999999999954
No 23
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.59 E-value=3.2e-15 Score=135.40 Aligned_cols=146 Identities=15% Similarity=0.212 Sum_probs=110.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-cEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCch
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G-~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~ 190 (316)
|+|+|||+|+||.++|++|.+. | ++|.+.+++.++..+.+.+.|+.. ..+..+++ ++|+|++++|+..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~------g~~~v~~~~r~~~~~~~~~~~~g~~~----~~~~~~~~-~~D~vi~~v~~~~ 69 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ------GGYRIYIANRGAEKRERLEKELGVET----SATLPELH-SDDVLILAVKPQD 69 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------CSCEEEEECSSHHHHHHHHHHTCCEE----ESSCCCCC-TTSEEEECSCHHH
T ss_pred CEEEEECchHHHHHHHHHHHHC------CCCeEEEECCCHHHHHHHHHhcCCEE----eCCHHHHh-cCCEEEEEeCchh
Confidence 5899999999999999999998 8 888777665433333334457663 34666778 9999999999777
Q ss_pred HHHHHHHHHhcCCCCcEEEEe-CCchhhhhhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEeeccCC
Q 021218 191 QADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV 269 (316)
Q Consensus 191 ~~~vi~ei~~~mk~gaiLid~-aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~d~ 269 (316)
..+++.++.+ + +++|+++ +|+....+++ .++.+.++++.+||.|... + .|... +++....
T Consensus 70 ~~~v~~~l~~--~-~~ivv~~~~g~~~~~l~~---~~~~~~~~v~~~~~~~~~~-------~-----~g~~~-i~~~~~~ 130 (263)
T 1yqg_A 70 MEAACKNIRT--N-GALVLSVAAGLSVGTLSR---YLGGTRRIVRVMPNTPGKI-------G-----LGVSG-MYAEAEV 130 (263)
T ss_dssp HHHHHTTCCC--T-TCEEEECCTTCCHHHHHH---HTTSCCCEEEEECCGGGGG-------T-----CEEEE-EECCTTS
T ss_pred HHHHHHHhcc--C-CCEEEEecCCCCHHHHHH---HcCCCCcEEEEcCCHHHHH-------c-----CceEE-EEcCCCC
Confidence 7777776654 5 8888887 7887766665 4555678999999887665 2 34554 6677677
Q ss_pred CHHHHHHHHHHHHHcCCC
Q 021218 270 DGRATNVALGWSVALGSP 287 (316)
Q Consensus 270 ~~~a~e~a~~l~~alG~~ 287 (316)
+++..+.++.+++.+|..
T Consensus 131 ~~~~~~~~~~l~~~~g~~ 148 (263)
T 1yqg_A 131 SETDRRIADRIMKSVGLT 148 (263)
T ss_dssp CHHHHHHHHHHHHTTEEE
T ss_pred CHHHHHHHHHHHHhCCCE
Confidence 889999999999999954
No 24
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.59 E-value=4.8e-15 Score=144.02 Aligned_cols=164 Identities=15% Similarity=0.182 Sum_probs=116.8
Q ss_pred cccchhhHHhhcCCcccc----ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC
Q 021218 85 SLADRDEYIVRGGRDLFN----LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA 160 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~F~----~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~ 160 (316)
++..+++.+ |+|+|.+. ....+|.| ++|||||+|.||+++|+.++.+ |++|+++++.. ..+.+.+.
T Consensus 148 ~~~~~~~~~-r~g~~~w~~~~~~~~~~l~g-ktvGIIGlG~IG~~vA~~l~~f------G~~V~~~d~~~--~~~~~~~~ 217 (365)
T 4hy3_A 148 GIVDADIAF-QEGTELWGGEGNASARLIAG-SEIGIVGFGDLGKALRRVLSGF------RARIRVFDPWL--PRSMLEEN 217 (365)
T ss_dssp TTTHHHHHH-HHTCCCCSSSSTTSCCCSSS-SEEEEECCSHHHHHHHHHHTTS------CCEEEEECSSS--CHHHHHHT
T ss_pred chhHHHHHH-HcCCccccccccccccccCC-CEEEEecCCcccHHHHHhhhhC------CCEEEEECCCC--CHHHHhhc
Confidence 366677775 99996432 23589999 9999999999999999999999 99987776653 34556677
Q ss_pred CceecCCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeC-Cch------hhhhhccccCCCCCcc
Q 021218 161 GFTEENGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIG 231 (316)
Q Consensus 161 G~~~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~a-Gv~------l~~l~~~~~~~~~~i~ 231 (316)
|+. ..+++|++++||+|++|+|.+..++ +++ +.++.||+|++|++++ |-. ...+++..+. ..++
T Consensus 218 g~~-----~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~--aaLD 290 (365)
T 4hy3_A 218 GVE-----PASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV--AASD 290 (365)
T ss_dssp TCE-----ECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE--EEES
T ss_pred Cee-----eCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce--EEee
Confidence 876 3489999999999999999998776 664 8899999999999876 321 3344442222 4566
Q ss_pred EEEeccCCCchhhHHHHhcCccccCCCceEEEeecc-CCCHHHHHH
Q 021218 232 VIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNV 276 (316)
Q Consensus 232 vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~-d~~~~a~e~ 276 (316)
|....|..+.+. ++.- -|++++||- ..+.++.+.
T Consensus 291 V~~~EPl~~~~p---L~~~--------~nvilTPHia~~t~e~~~~ 325 (365)
T 4hy3_A 291 VYPEEPLPLDHP---VRSL--------KGFIRSAHRAGALDSAFKK 325 (365)
T ss_dssp CCSSSSCCTTCG---GGTC--------TTEEECCSCSSCCHHHHHH
T ss_pred CCCCCCCCCCCh---hhcC--------CCEEECCccccCHHHHHHH
Confidence 666677433332 3332 478999986 445555543
No 25
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.59 E-value=7.2e-15 Score=131.50 Aligned_cols=176 Identities=14% Similarity=0.064 Sum_probs=113.7
Q ss_pred hhcCCccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEE-EecCCcccHHHHHHCCceecCCCcCCH
Q 021218 94 VRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDI 172 (316)
Q Consensus 94 v~~G~w~F~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Viv-g~r~~~~s~~~A~~~G~~~~~~t~~~~ 172 (316)
+-+|-|.+|..+.- ..|++|+|||+|+||.++|+.|.+. |++|.+ .+|+.++..+.+.+.|... ..+.
T Consensus 7 ~~~~~~~~~~~~~~-m~mmkI~IIG~G~mG~~la~~l~~~------g~~V~~v~~r~~~~~~~l~~~~g~~~----~~~~ 75 (220)
T 4huj_A 7 HSSGVDLGTENLYF-QSMTTYAIIGAGAIGSALAERFTAA------QIPAIIANSRGPASLSSVTDRFGASV----KAVE 75 (220)
T ss_dssp ----------CTTG-GGSCCEEEEECHHHHHHHHHHHHHT------TCCEEEECTTCGGGGHHHHHHHTTTE----EECC
T ss_pred ccccccccccchhh-hcCCEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCCHHHHHHHHHHhCCCc----ccCh
Confidence 46677766532111 1247999999999999999999998 988877 4544444444455556542 2345
Q ss_pred HhhhccCCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeC-Cc--------------hhhhhhccccCCCCCccEEEecc
Q 021218 173 YETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH-GF--------------LLGHLQSMGLDFPKNIGVIAVCP 237 (316)
Q Consensus 173 ~e~i~~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~a-Gv--------------~l~~l~~~~~~~~~~i~vI~vhP 237 (316)
.+.++++|+|++++|++...+++.++.+ + ++++|++++ |+ ....+++ .+| +.++++++|
T Consensus 76 ~~~~~~aDvVilavp~~~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~---~l~-~~~vv~~~~ 149 (220)
T 4huj_A 76 LKDALQADVVILAVPYDSIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSE---LVP-GAKVVKAFN 149 (220)
T ss_dssp HHHHTTSSEEEEESCGGGHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHH---HST-TCEEEEESC
T ss_pred HHHHhcCCEEEEeCChHHHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHH---HCC-CCCEEECCC
Confidence 5678999999999999999999988766 4 578887654 55 3555655 455 578999999
Q ss_pred CCCchhhHHHHhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCCCeeecC
Q 021218 238 KGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATT 293 (316)
Q Consensus 238 n~pg~~~r~lf~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~~~~~tT 293 (316)
|.+.... ..|....+.+... +.... ++++.+.+.++++.+|++-+..-.
T Consensus 150 ~~~~~v~----~~g~~~~~~~~~v-~~~g~--~~~~~~~v~~l~~~~G~~~~~~G~ 198 (220)
T 4huj_A 150 TLPAAVL----AADPDKGTGSRVL-FLSGN--HSDANRQVAELISSLGFAPVDLGT 198 (220)
T ss_dssp SSCHHHH----TSCSBCSSCEEEE-EEEES--CHHHHHHHHHHHHHTTCEEEECCS
T ss_pred CCCHHHh----hhCcccCCCCeeE-EEeCC--CHHHHHHHHHHHHHhCCCeEeeCC
Confidence 9988774 1122222222333 22222 479999999999999965443333
No 26
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.59 E-value=3.6e-15 Score=144.09 Aligned_cols=165 Identities=19% Similarity=0.145 Sum_probs=116.9
Q ss_pred cccchhhHHhhcCCccc--------c---ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCccc
Q 021218 85 SLADRDEYIVRGGRDLF--------N---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS 153 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~F--------~---~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s 153 (316)
++..|++.+ |+|+|.. + ....+|.| ++|||||+|.||.++|+.++.+ |++|+++++.. .
T Consensus 125 ~~~~~~~~~-~~g~W~~~~~~~~~~~~~~~~~~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~d~~~--~ 194 (352)
T 3gg9_A 125 RIPQYVASL-KHGAWQQSGLKSTTMPPNFGIGRVLKG-QTLGIFGYGKIGQLVAGYGRAF------GMNVLVWGREN--S 194 (352)
T ss_dssp THHHHHHHH-HTTCTTCCCCCCTTSCTTTTSBCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSHH--H
T ss_pred hHHHHHHHH-HcCCCCcccccccccccccccCccCCC-CEEEEEeECHHHHHHHHHHHhC------CCEEEEECCCC--C
Confidence 355677775 9999953 2 12589999 9999999999999999999999 99987766542 3
Q ss_pred HHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeCCch-------hhhhhcccc
Q 021218 154 FAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSHGFL-------LGHLQSMGL 224 (316)
Q Consensus 154 ~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~aGv~-------l~~l~~~~~ 224 (316)
.+.+.+.|+.. ..+++|++++||+|++|+|.+..++ ++. +.++.||+|++|++++--. ...+++..
T Consensus 195 ~~~~~~~g~~~----~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~- 269 (352)
T 3gg9_A 195 KERARADGFAV----AESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGR- 269 (352)
T ss_dssp HHHHHHTTCEE----CSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTS-
T ss_pred HHHHHhcCceE----eCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCC-
Confidence 34566778763 4589999999999999999998776 665 7899999999999886321 23344322
Q ss_pred CCCCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEeecc-CCCHHHHH
Q 021218 225 DFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATN 275 (316)
Q Consensus 225 ~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~-d~~~~a~e 275 (316)
......+|...+|..+.+. ++.. -|+++|||- ..+.++.+
T Consensus 270 i~gA~lDV~~~EPl~~~~p---L~~~--------~nvilTPHia~~t~e~~~ 310 (352)
T 3gg9_A 270 PGMAAIDVFETEPILQGHT---LLRM--------ENCICTPHIGYVERESYE 310 (352)
T ss_dssp SSEEEECCCSSSCCCSCCG---GGGC--------TTEEECCSCTTCBHHHHH
T ss_pred ccEEEecccCCCCCCCCCh---hhcC--------CCEEECCCCCCCCHHHHH
Confidence 2223566666677332322 3332 478999986 34444433
No 27
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.58 E-value=7e-16 Score=145.51 Aligned_cols=158 Identities=16% Similarity=0.140 Sum_probs=111.9
Q ss_pred ccchhhHHhhcCCccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec
Q 021218 86 LADRDEYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE 165 (316)
Q Consensus 86 l~~~~e~vv~~G~w~F~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~ 165 (316)
+..|++.+ ++|+|..... .+|.| ++|||||+|.||.++|+.++.+ |++|+++++..... + ....
T Consensus 100 ~~~~~~~~-~~g~w~~~~~-~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~~-~-----~~~~- 163 (290)
T 3gvx_A 100 ILENNELM-KAGIFRQSPT-TLLYG-KALGILGYGGIGRRVAHLAKAF------GMRVIAYTRSSVDQ-N-----VDVI- 163 (290)
T ss_dssp HHHHHHHH-HTTCCCCCCC-CCCTT-CEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSCCCT-T-----CSEE-
T ss_pred hhhhhhHh-hhcccccCCc-eeeec-chheeeccCchhHHHHHHHHhh------CcEEEEEecccccc-c-----cccc-
Confidence 45567775 9999976433 78999 9999999999999999999999 99988777654321 1 1221
Q ss_pred CCCcCCHHhhhccCCEEEEcccCchHHH-HH-HHHHhcCCCCcEEEEeC-Cch------hhhhhccccCCCCCccEEEec
Q 021218 166 NGTLGDIYETISGSDLVLLLISDAAQAD-NY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVC 236 (316)
Q Consensus 166 ~~t~~~~~e~i~~ADIViLavp~~~~~~-vi-~ei~~~mk~gaiLid~a-Gv~------l~~l~~~~~~~~~~i~vI~vh 236 (316)
..+++|++++||+|++|+|.+..++ ++ .+.++.||+|++|++++ |-. ...+++. .......+|...+
T Consensus 164 ---~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g-~i~ga~lDV~~~E 239 (290)
T 3gvx_A 164 ---SESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKER-SDVWYLSDVWWNE 239 (290)
T ss_dssp ---CSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHC-TTCEEEESCCTTT
T ss_pred ---cCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhc-cceEEeeccccCC
Confidence 4589999999999999999988765 66 47899999999999876 321 2233331 1223456677777
Q ss_pred cCCCchhhHHHHhcCccccCCCceEEEeecc--CCCHHHHHHH
Q 021218 237 PKGMGPSVRRLYVQGKEINGAGINSSFAVHQ--DVDGRATNVA 277 (316)
Q Consensus 237 Pn~pg~~~r~lf~~G~e~~G~G~~~iiap~~--d~~~~a~e~a 277 (316)
|. ..++. --|+++|||- ..+.++.+.+
T Consensus 240 P~------~pL~~--------~~nvilTPHiag~~t~e~~~~~ 268 (290)
T 3gvx_A 240 PE------ITETN--------LRNAILSPHVAGGMSGEIMDIA 268 (290)
T ss_dssp TS------CCSCC--------CSSEEECCSCSSCBTTBCCHHH
T ss_pred cc------cchhh--------hhhhhcCccccCCccchHHHHH
Confidence 74 11222 2589999993 3455544443
No 28
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.58 E-value=2.1e-14 Score=133.02 Aligned_cols=154 Identities=15% Similarity=0.117 Sum_probs=115.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC-----------C--ceec--------CCCc
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-----------G--FTEE--------NGTL 169 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~-----------G--~~~~--------~~t~ 169 (316)
|++|+|||.|.||.++|+.+... |++|++.+++ ++..+.+.+. | ...+ -...
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~------G~~V~l~d~~-~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~ 76 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH------GFAVTAYDIN-TDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYS 76 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSS-HHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCeEEEEeCC-HHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEe
Confidence 47999999999999999999999 9998877655 3333333332 1 1000 0014
Q ss_pred CCHHhhhccCCEEEEcccCch--HHHHHHHHHhcCCCCcEEE-EeCCchhhhhhccccCCCCCccEEEeccCCCchhhHH
Q 021218 170 GDIYETISGSDLVLLLISDAA--QADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRR 246 (316)
Q Consensus 170 ~~~~e~i~~ADIViLavp~~~--~~~vi~ei~~~mk~gaiLi-d~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~ 246 (316)
.++++++++||+||+++|++. ..+++.++.+.++++++|+ ..+++.+..+.. .+....++++.||..|...
T Consensus 77 ~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la~---~~~~~~~~ig~h~~~p~~~--- 150 (283)
T 4e12_A 77 DDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVG---YTGRGDKFLALHFANHVWV--- 150 (283)
T ss_dssp SCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHH---HHSCGGGEEEEEECSSTTT---
T ss_pred CCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHHh---hcCCCcceEEEccCCCccc---
Confidence 578889999999999999984 4458889999999999988 466776665544 2233468999999877654
Q ss_pred HHhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCCC
Q 021218 247 LYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPF 288 (316)
Q Consensus 247 lf~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~~ 288 (316)
+ ....++++..++++.++.++.+++.+|..-
T Consensus 151 ----~-------~lvevv~~~~t~~~~~~~~~~l~~~~g~~~ 181 (283)
T 4e12_A 151 ----N-------NTAEVMGTTKTDPEVYQQVVEFASAIGMVP 181 (283)
T ss_dssp ----S-------CEEEEEECTTSCHHHHHHHHHHHHHTTCEE
T ss_pred ----C-------ceEEEEeCCCCCHHHHHHHHHHHHHcCCEE
Confidence 2 356689999999999999999999999543
No 29
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.58 E-value=4.7e-15 Score=143.01 Aligned_cols=165 Identities=18% Similarity=0.224 Sum_probs=114.7
Q ss_pred cccchhhHHhhcCCcc-c---cccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC
Q 021218 85 SLADRDEYIVRGGRDL-F---NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA 160 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~-F---~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~ 160 (316)
++..+++.+ |+|+|. + .+...+|.| ++|||||+|.||+++|+.++.+ |++|+++++.... .+.+ .
T Consensus 145 ~~~~~~~~~-r~g~W~~~~~~~~~g~~l~g-ktvGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~-~~~~--~ 213 (345)
T 4g2n_A 145 RGYEADRMV-RSGSWPGWGPTQLLGMGLTG-RRLGIFGMGRIGRAIATRARGF------GLAIHYHNRTRLS-HALE--E 213 (345)
T ss_dssp THHHHHHHH-HTTCCCCCCTTTTCBCCCTT-CEEEEESCSHHHHHHHHHHHTT------TCEEEEECSSCCC-HHHH--T
T ss_pred CHHHHHHHH-HcCCCcccCcccccccccCC-CEEEEEEeChhHHHHHHHHHHC------CCEEEEECCCCcc-hhhh--c
Confidence 355677775 999995 2 223589999 9999999999999999999999 9998777665422 2222 2
Q ss_pred CceecCCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeC-Cch------hhhhhccccCCCCCcc
Q 021218 161 GFTEENGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIG 231 (316)
Q Consensus 161 G~~~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~a-Gv~------l~~l~~~~~~~~~~i~ 231 (316)
|+.. ..+++|++++||+|++|+|.+..++ +++ +.++.||+|++|++++ |-. +..+++ +.......+
T Consensus 214 g~~~----~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~-g~i~gA~LD 288 (345)
T 4g2n_A 214 GAIY----HDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRS-KHLFAAGLD 288 (345)
T ss_dssp TCEE----CSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHH-TSEEEEEES
T ss_pred CCeE----eCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHh-CCceEEEec
Confidence 6552 3489999999999999999988775 664 7899999999999876 321 333443 222234566
Q ss_pred EEEeccCCCchhhHHHHhcCccccCCCceEEEeecc-CCCHHHHHHH
Q 021218 232 VIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNVA 277 (316)
Q Consensus 232 vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~-d~~~~a~e~a 277 (316)
|...+| .+.+. |+.. -|+++|||- ..+.++.+.+
T Consensus 289 Vf~~EP-~~~~p---L~~~--------~nvilTPHia~~t~e~~~~~ 323 (345)
T 4g2n_A 289 VFANEP-AIDPR---YRSL--------DNIFLTPHIGSATHETRDAM 323 (345)
T ss_dssp CCTTTT-SCCTT---GGGC--------TTEEECCSCTTCBHHHHHHH
T ss_pred CCCCCC-CCCch---HHhC--------CCEEEcCccCcCCHHHHHHH
Confidence 666777 32222 3332 479999986 3444544433
No 30
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.57 E-value=4.3e-15 Score=142.48 Aligned_cols=111 Identities=18% Similarity=0.133 Sum_probs=90.3
Q ss_pred ccchhhHHhhcCCcccc--ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCce
Q 021218 86 LADRDEYIVRGGRDLFN--LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFT 163 (316)
Q Consensus 86 l~~~~e~vv~~G~w~F~--~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~ 163 (316)
+..|++.+ |+|+|... +...+|.| ++|||||+|.||+++|+.++.+ |++|+++++..... ..+.|+.
T Consensus 116 ~~~~~~~~-~~g~w~~~~~~~~~~l~g-~tvgIiG~G~IG~~vA~~l~~~------G~~V~~~d~~~~~~---~~~~g~~ 184 (334)
T 2pi1_A 116 LKRIEDRV-KKLNFSQDSEILARELNR-LTLGVIGTGRIGSRVAMYGLAF------GMKVLCYDVVKRED---LKEKGCV 184 (334)
T ss_dssp HHHHHHHH-TTTCCCCCGGGCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCHH---HHHTTCE
T ss_pred HHHHHHHH-HcCCCccccCccceeccC-ceEEEECcCHHHHHHHHHHHHC------cCEEEEECCCcchh---hHhcCce
Confidence 55577775 99999654 23689999 9999999999999999999999 99988777664332 2245665
Q ss_pred ecCCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeC
Q 021218 164 EENGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSH 212 (316)
Q Consensus 164 ~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~a 212 (316)
..+++|++++||+|++|+|.+..++ ++. +.++.||+|++|++++
T Consensus 185 -----~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~a 230 (334)
T 2pi1_A 185 -----YTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTA 230 (334)
T ss_dssp -----ECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred -----ecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECC
Confidence 3479999999999999999987765 664 7899999999999876
No 31
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.56 E-value=3e-15 Score=144.61 Aligned_cols=166 Identities=13% Similarity=0.091 Sum_probs=117.3
Q ss_pred ccchhhHHhhcCCcccc---ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCc
Q 021218 86 LADRDEYIVRGGRDLFN---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF 162 (316)
Q Consensus 86 l~~~~e~vv~~G~w~F~---~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~ 162 (316)
+..+++.+ ++|+|... ....+|.| ++|||||+|.||.++|+.++.+ |++|+++++.. ...+.+.+.|+
T Consensus 138 ~~~~~~~~-~~g~W~~~~~~~~~~~l~g-ktvGIIG~G~IG~~vA~~l~~~------G~~V~~~dr~~-~~~~~~~~~g~ 208 (351)
T 3jtm_A 138 FVPGYNQV-VKGEWNVAGIAYRAYDLEG-KTIGTVGAGRIGKLLLQRLKPF------GCNLLYHDRLQ-MAPELEKETGA 208 (351)
T ss_dssp HHHHHHHH-HTTCCCHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHGGG------CCEEEEECSSC-CCHHHHHHHCC
T ss_pred cHHHHHHH-HcCCCccccccCCcccccC-CEEeEEEeCHHHHHHHHHHHHC------CCEEEEeCCCc-cCHHHHHhCCC
Confidence 45566675 99999642 22478999 9999999999999999999999 99977666543 34556666777
Q ss_pred eecCCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeC-Cch------hhhhhccccCCCCCccEE
Q 021218 163 TEENGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVI 233 (316)
Q Consensus 163 ~~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~a-Gv~------l~~l~~~~~~~~~~i~vI 233 (316)
.. ..+++|++++||+|++|+|.+..++ +++ +.++.||+|++|++++ |-. ...+++.. ......+|.
T Consensus 209 ~~----~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~-i~ga~lDV~ 283 (351)
T 3jtm_A 209 KF----VEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGH-IGGYSGDVW 283 (351)
T ss_dssp EE----CSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTS-EEEEEESCC
T ss_pred eE----cCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCC-ccEEEeCCC
Confidence 53 4589999999999999999987765 664 7899999999999876 321 22343311 212345666
Q ss_pred EeccCCCchhhHHHHhcCccccCCCceEEEeecc-CCCHHHHHH
Q 021218 234 AVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNV 276 (316)
Q Consensus 234 ~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~-d~~~~a~e~ 276 (316)
...|..+.+. ++.- -|+++|||- ..+.++.+.
T Consensus 284 ~~EP~~~~~p---L~~~--------~nvilTPHia~~t~ea~~~ 316 (351)
T 3jtm_A 284 DPQPAPKDHP---WRYM--------PNQAMTPHTSGTTIDAQLR 316 (351)
T ss_dssp SSSSCCTTCG---GGTS--------TTBCCCCSCGGGSHHHHHH
T ss_pred CCCCCCCCCh---hhcC--------CCEEECCcCCCCCHHHHHH
Confidence 6677443332 2222 368899993 556665554
No 32
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.56 E-value=1.5e-14 Score=139.29 Aligned_cols=162 Identities=20% Similarity=0.240 Sum_probs=104.4
Q ss_pred cccchhhHHhhcCCcccc--c-cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCC
Q 021218 85 SLADRDEYIVRGGRDLFN--L-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG 161 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~F~--~-~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G 161 (316)
++..+++.+ |+|+|... + +..+|.| |+|||||+|.||.++|+.++.+ |++|+++++...+ ..+
T Consensus 144 ~~~~~~~~~-~~g~W~~~~~~~~~~~l~g-ktiGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~------~~~ 209 (340)
T 4dgs_A 144 RVGDGDRLV-REGRWAAGEQLPLGHSPKG-KRIGVLGLGQIGRALASRAEAF------GMSVRYWNRSTLS------GVD 209 (340)
T ss_dssp THHHHHHHH-HTTCC------CCCCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSCCT------TSC
T ss_pred ChHHHHHHH-hcCCcccccCcCccccccC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCccc------ccC
Confidence 355677775 99999542 1 2479999 9999999999999999999999 9998877765432 234
Q ss_pred ceecCCCcCCHHhhhccCCEEEEcccCchHHH-HH-HHHHhcCCCCcEEEEeC-Cch------hhhhhccccCCCCCccE
Q 021218 162 FTEENGTLGDIYETISGSDLVLLLISDAAQAD-NY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGV 232 (316)
Q Consensus 162 ~~~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi-~ei~~~mk~gaiLid~a-Gv~------l~~l~~~~~~~~~~i~v 232 (316)
+.. ..+++|++++||+|++|+|.+..++ ++ ++.++.||++++|++++ |-. ...+++ +.......+|
T Consensus 210 ~~~----~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~-g~i~gA~LDV 284 (340)
T 4dgs_A 210 WIA----HQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKS-GTIAGAGLDV 284 (340)
T ss_dssp CEE----CSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC---------------CCSSEEEESC
T ss_pred cee----cCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHc-CCceEEEeCC
Confidence 432 4589999999999999999988776 66 48899999999999875 321 222322 1122335677
Q ss_pred EEeccCCCchhhHHHHhcCccccCCCceEEEeecc-CCCHHHHHHH
Q 021218 233 IAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNVA 277 (316)
Q Consensus 233 I~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~-d~~~~a~e~a 277 (316)
...+|..+. .|+.- -|++++||- ..+.++.+.+
T Consensus 285 f~~EP~~~~----~L~~~--------~nvilTPHia~~t~e~~~~~ 318 (340)
T 4dgs_A 285 FVNEPAIRS----EFHTT--------PNTVLMPHQGSATVETRMAM 318 (340)
T ss_dssp CSSSSSCCS----HHHHS--------SSEEECSSCSSCCHHHHHHH
T ss_pred cCCCCCCcc----chhhC--------CCEEEcCcCCcCCHHHHHHH
Confidence 777884432 34443 478999986 4455554443
No 33
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.56 E-value=5.6e-15 Score=141.40 Aligned_cols=166 Identities=19% Similarity=0.253 Sum_probs=116.1
Q ss_pred ccchhhHHhhcCCcc-cc--ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCc
Q 021218 86 LADRDEYIVRGGRDL-FN--LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF 162 (316)
Q Consensus 86 l~~~~e~vv~~G~w~-F~--~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~ 162 (316)
+..+++.+ |+|+|. +. ....+|.| ++|||||+|.||.++|+.++.+ |++|+++++.. ...+.+.+.|+
T Consensus 119 ~~~~~~~~-~~g~w~~~~~~~~~~~l~g-~tvGIIG~G~IG~~vA~~l~~~------G~~V~~~d~~~-~~~~~~~~~g~ 189 (330)
T 4e5n_A 119 LRAADAFV-RSGKFRGWQPRFYGTGLDN-ATVGFLGMGAIGLAMADRLQGW------GATLQYHEAKA-LDTQTEQRLGL 189 (330)
T ss_dssp HHHHHHHH-HTTCCCSCCSCCCCCCSTT-CEEEEECCSHHHHHHHHHTTTS------CCEEEEECSSC-CCHHHHHHHTE
T ss_pred hHHHHHHH-HhCCccccCccccCCccCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCCC-CcHhHHHhcCc
Confidence 55567775 999995 42 22578999 9999999999999999999999 99987766653 23455666677
Q ss_pred eecCCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeC-Cch------hhhhhccccCCCCCccEE
Q 021218 163 TEENGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVI 233 (316)
Q Consensus 163 ~~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~a-Gv~------l~~l~~~~~~~~~~i~vI 233 (316)
. ..++++++++||+|++|+|.+..++ ++. +.++.||+|++|++++ |-. ...+++.. ......+|.
T Consensus 190 ~-----~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~-i~gA~lDV~ 263 (330)
T 4e5n_A 190 R-----QVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQ-LGGYAADVF 263 (330)
T ss_dssp E-----ECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTS-EEEEEESCC
T ss_pred e-----eCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCC-ccEEEeccc
Confidence 5 3489999999999999999987765 665 8999999999999876 321 22333311 112345555
Q ss_pred Eec-------cCCCchhhHHHHhcCccccCCCceEEEeecc-CCCHHHHHHH
Q 021218 234 AVC-------PKGMGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNVA 277 (316)
Q Consensus 234 ~vh-------Pn~pg~~~r~lf~~G~e~~G~G~~~iiap~~-d~~~~a~e~a 277 (316)
..+ |..+.+ .|+.. -|+++|||- ..+.++.+.+
T Consensus 264 ~~E~~~~~~~Pl~~~~---~L~~~--------~nvilTPHia~~t~e~~~~~ 304 (330)
T 4e5n_A 264 EMEDWARADRPQQIDP---ALLAH--------PNTLFTPHIGSAVRAVRLEI 304 (330)
T ss_dssp GGGCTTCTTCCSSCCH---HHHTC--------SSEEECSSCTTCCHHHHHHH
T ss_pred ccccccccCCCCCCCc---hHHcC--------CCEEECCcCCCChHHHHHHH
Confidence 556 532222 24443 479999986 3455554443
No 34
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.56 E-value=1.2e-14 Score=137.56 Aligned_cols=160 Identities=11% Similarity=0.045 Sum_probs=109.8
Q ss_pred ccchhhHHhhcCCccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec
Q 021218 86 LADRDEYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE 165 (316)
Q Consensus 86 l~~~~e~vv~~G~w~F~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~ 165 (316)
+..+++.+ |+|+|.......+|.| ++|||||+|.||.++|+.++++ |++|++.++... +. +...
T Consensus 101 ~~~~~~~~-~~g~w~~~~~~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~dr~~~---~~----~~~~- 164 (303)
T 1qp8_A 101 IIQYGEKM-KRGDYGRDVEIPLIQG-EKVAVLGLGEIGTRVGKILAAL------GAQVRGFSRTPK---EG----PWRF- 164 (303)
T ss_dssp HHHHHHHH-HTTCCCCCSCCCCCTT-CEEEEESCSTHHHHHHHHHHHT------TCEEEEECSSCC---CS----SSCC-
T ss_pred HHHHHHHH-HcCCCCCCCCCCCCCC-CEEEEEccCHHHHHHHHHHHHC------CCEEEEECCCcc---cc----Cccc-
Confidence 55567775 9999953212358999 9999999999999999999999 999877666533 11 3321
Q ss_pred CCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeCCch-------hhhhhccccCCCCCccEEEec
Q 021218 166 NGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVIAVC 236 (316)
Q Consensus 166 ~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~aGv~-------l~~l~~~~~~~~~~i~vI~vh 236 (316)
..++++++++||+|++|+|++..++ +++ +.++.||+|++|++++... ...+++ +.......++. .
T Consensus 165 ---~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~-g~i~gA~lDv~--~ 238 (303)
T 1qp8_A 165 ---TNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKE-RPQFIFASDVW--W 238 (303)
T ss_dssp ---BSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHH-CTTCEEEESCC--T
T ss_pred ---CCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHh-CCceEEEeccC--C
Confidence 3578899999999999999997654 775 7899999999999886432 122332 11111222322 0
Q ss_pred cCCCchhhHHHHhcCccccCCCceEEEeeccCC---CHHHHH
Q 021218 237 PKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV---DGRATN 275 (316)
Q Consensus 237 Pn~pg~~~r~lf~~G~e~~G~G~~~iiap~~d~---~~~a~e 275 (316)
...|.+....||.. -|+++|||... +.++.+
T Consensus 239 ~~ep~~~~~~L~~~--------~nviltPH~~~~~~t~e~~~ 272 (303)
T 1qp8_A 239 GRNDFAKDAEFFSL--------PNVVATPWVAGGYGNERVWR 272 (303)
T ss_dssp TTTCCGGGHHHHTS--------TTEEECCSCSSSSSCHHHHH
T ss_pred CCCCCCCCChhhcC--------CCEEECCCcCCCCCCHHHHH
Confidence 23444444557764 58999999753 566644
No 35
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.55 E-value=9.9e-15 Score=138.43 Aligned_cols=159 Identities=20% Similarity=0.209 Sum_probs=111.2
Q ss_pred cccchhhHHhhcCCcc-cc---ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC
Q 021218 85 SLADRDEYIVRGGRDL-FN---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA 160 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~-F~---~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~ 160 (316)
++..+++.+ |+|+|. +. ....++.| ++|||||+|.||.++|+.++++ |++|++.++...+..
T Consensus 116 ~~~~~~~~~-~~g~w~~~~~~~~~~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~~------ 181 (311)
T 2cuk_A 116 RVVEGAAYA-RDGLWKAWHPELLLGLDLQG-LTLGLVGMGRIGQAVAKRALAF------GMRVVYHARTPKPLP------ 181 (311)
T ss_dssp THHHHHHHH-HTTCCCCCCTTTTCBCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCSSS------
T ss_pred ChHHHHHHH-HcCCCCccccccccCcCCCC-CEEEEEEECHHHHHHHHHHHHC------CCEEEEECCCCcccc------
Confidence 355677775 999995 32 22478999 9999999999999999999999 999877766543221
Q ss_pred CceecCCCcCCHHhhhccCCEEEEcccCchHH-HHHH-HHHhcCCCCcEEEEeCCch-------hhhhhccccCCCCCcc
Q 021218 161 GFTEENGTLGDIYETISGSDLVLLLISDAAQA-DNYE-KIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIG 231 (316)
Q Consensus 161 G~~~~~~t~~~~~e~i~~ADIViLavp~~~~~-~vi~-ei~~~mk~gaiLid~aGv~-------l~~l~~~~~~~~~~i~ 231 (316)
+. ..++++++++||+|++|+|++..+ .+++ +.++.||+|+++++++... ...++ +.......+
T Consensus 182 -~~-----~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~--g~i~ga~lD 253 (311)
T 2cuk_A 182 -YP-----FLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR--GHLFGAGLD 253 (311)
T ss_dssp -SC-----BCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT--TTSSEEEES
T ss_pred -cc-----cCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh--CcCCEEEEe
Confidence 11 347899999999999999999765 4775 7889999999999876432 11222 111123466
Q ss_pred EEEeccCCCchhhHHHHhcCccccCCCceEEEeeccCC-CHHHHHH
Q 021218 232 VIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV-DGRATNV 276 (316)
Q Consensus 232 vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~d~-~~~a~e~ 276 (316)
|+..+|..+. ..||.. -|+++|||... +.++.+.
T Consensus 254 v~~~eP~~~~---~~L~~~--------~nviltPh~~~~t~~~~~~ 288 (311)
T 2cuk_A 254 VTDPEPLPPG---HPLYAL--------PNAVITPHIGSAGRTTRER 288 (311)
T ss_dssp SCSSSSCCTT---SGGGGC--------TTEEECCSCTTCBHHHHHH
T ss_pred eCCCCCCCCC---ChhhhC--------CCEEECCcCCCCCHHHHHH
Confidence 7777784322 235553 58999998744 4444333
No 36
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.54 E-value=1.3e-14 Score=140.65 Aligned_cols=170 Identities=15% Similarity=0.025 Sum_probs=117.2
Q ss_pred cccchhhHHhhcCCcccc---ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcE-EEEEecCCcccHHHHHHC
Q 021218 85 SLADRDEYIVRGGRDLFN---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIV-VKVGLRKGSRSFAEARAA 160 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~F~---~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~-Vivg~r~~~~s~~~A~~~ 160 (316)
++..+++.+ ++|+|.+. ....+|.| ++|||||+|+||.++|+.++.+ |++ |++.++.. ...+.+.+.
T Consensus 137 ~~~~~~~~~-~~g~W~~~~~~~~~~~l~g-~tvgIIG~G~IG~~vA~~l~~~------G~~~V~~~d~~~-~~~~~~~~~ 207 (364)
T 2j6i_A 137 NFVPAHEQI-INHDWEVAAIAKDAYDIEG-KTIATIGAGRIGYRVLERLVPF------NPKELLYYDYQA-LPKDAEEKV 207 (364)
T ss_dssp THHHHHHHH-HTTCCCHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHGGG------CCSEEEEECSSC-CCHHHHHHT
T ss_pred ChHHHHHHH-HhCCCCcCcccCCcccCCC-CEEEEECcCHHHHHHHHHHHhC------CCcEEEEECCCc-cchhHHHhc
Confidence 355677775 99999642 22478999 9999999999999999999999 996 87766543 334556677
Q ss_pred CceecCCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeCCch-------hhhhhccccCCCCCcc
Q 021218 161 GFTEENGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIG 231 (316)
Q Consensus 161 G~~~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~aGv~-------l~~l~~~~~~~~~~i~ 231 (316)
|+.. ..++++++++||+|++|+|++..++ +++ +.++.||+|++|++++--. ...+++.. ......+
T Consensus 208 g~~~----~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~-i~gA~LD 282 (364)
T 2j6i_A 208 GARR----VENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQ-LRGYGGD 282 (364)
T ss_dssp TEEE----CSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTS-EEEEEES
T ss_pred CcEe----cCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCC-CcEEEEe
Confidence 8763 3479999999999999999997765 674 7889999999999875321 22343321 2234566
Q ss_pred EEEeccCCCchhhHHHHhcCccccCCCceEEEeecc-CCCHHHH
Q 021218 232 VIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRAT 274 (316)
Q Consensus 232 vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~-d~~~~a~ 274 (316)
|....|..+.+....+-.. .+-|.++|||- ..+.++.
T Consensus 283 Vf~~EP~~~~~pL~~~~~~------~~~nvilTPHia~~t~e~~ 320 (364)
T 2j6i_A 283 VWFPQPAPKDHPWRDMRNK------YGAGNAMTPHYSGTTLDAQ 320 (364)
T ss_dssp CCSSSSCCTTCHHHHCCCT------TSCCEEECCSCGGGSHHHH
T ss_pred cCCCCCCCCCChHHhccCC------ccCcEEECCccCcCCHHHH
Confidence 7777775444443222000 01278999986 3344444
No 37
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.54 E-value=5.8e-15 Score=144.68 Aligned_cols=166 Identities=13% Similarity=0.025 Sum_probs=115.7
Q ss_pred cccchhhHHhhcCCccc--cc-cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCC
Q 021218 85 SLADRDEYIVRGGRDLF--NL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG 161 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~F--~~-~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G 161 (316)
++..+++.+ |+|+|+. +. ...+|.| ++|||||+|.||.++|+.++.+ |++|++.++.. ...+.+.+.|
T Consensus 164 ~~~~~~~~~-~~g~W~~~~~~~~~~~l~g-ktvGIIGlG~IG~~vA~~l~a~------G~~V~~~d~~~-~~~~~~~~~G 234 (393)
T 2nac_A 164 NYLPSHEWA-RKGGWNIADCVSHAYDLEA-MHVGTVAAGRIGLAVLRRLAPF------DVHLHYTDRHR-LPESVEKELN 234 (393)
T ss_dssp THHHHHHHH-HTTCCCHHHHHTTCCCCTT-CEEEEECCSHHHHHHHHHHGGG------TCEEEEECSSC-CCHHHHHHHT
T ss_pred ccHHHHHHH-HcCCCCccccccCCccCCC-CEEEEEeECHHHHHHHHHHHhC------CCEEEEEcCCc-cchhhHhhcC
Confidence 345566664 9999963 11 2468999 9999999999999999999999 99987666553 3344566677
Q ss_pred ceecCCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeCCch-------hhhhhccccCCCCCccE
Q 021218 162 FTEENGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGV 232 (316)
Q Consensus 162 ~~~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~aGv~-------l~~l~~~~~~~~~~i~v 232 (316)
+.. ..++++++++||+|++|+|.+..++ +++ +.++.||+|++|++++--. ...+++ +.......+|
T Consensus 235 ~~~----~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~-g~i~gA~lDV 309 (393)
T 2nac_A 235 LTW----HATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALES-GRLAGYAGDV 309 (393)
T ss_dssp CEE----CSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHT-TSEEEEEESC
T ss_pred cee----cCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHc-CCeeEEEEEe
Confidence 763 3478999999999999999987654 774 7889999999999875321 222332 1111234667
Q ss_pred EEeccCCCchhhHHHHhcCccccCCCceEEEeecc-CCCHHHHH
Q 021218 233 IAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATN 275 (316)
Q Consensus 233 I~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~-d~~~~a~e 275 (316)
+..+|..+.+. ++.. -|+++|||- ..+.++.+
T Consensus 310 ~~~EP~~~~~p---L~~~--------~nvilTPHia~~T~e~~~ 342 (393)
T 2nac_A 310 WFPQPAPKDHP---WRTM--------PYNGMTPHISGTTLTAQA 342 (393)
T ss_dssp CSSSSCCTTCG---GGTS--------TTBCCCCSCTTCSHHHHH
T ss_pred cCCCCCCCCCh---hHcC--------CCEEECCCCCcCcHHHHH
Confidence 77778433333 3332 478899986 34444443
No 38
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.53 E-value=1.5e-14 Score=142.02 Aligned_cols=164 Identities=18% Similarity=0.125 Sum_probs=106.7
Q ss_pred cccchhhHHhhcCCcccc-ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCC-c
Q 021218 85 SLADRDEYIVRGGRDLFN-LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-F 162 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~F~-~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G-~ 162 (316)
++..+++.+ ++|+|.-. +...+|.| |+|||||+|.||.++|+.++++ |++|+++++..... .| +
T Consensus 120 ~i~~~~~~~-~~g~W~~~~~~~~el~g-ktlGiIGlG~IG~~vA~~l~~~------G~~V~~~d~~~~~~------~~~~ 185 (404)
T 1sc6_A 120 GVPEANAKA-HRGVGNKLAAGSFEARG-KKLGIIGYGHIGTQLGILAESL------GMYVYFYDIENKLP------LGNA 185 (404)
T ss_dssp THHHHHHHH-HHTCCC-----CCCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCC------CTTC
T ss_pred ChHHHHHHH-HcCCccccCCCccccCC-CEEEEEeECHHHHHHHHHHHHC------CCEEEEEcCCchhc------cCCc
Confidence 355667775 99999532 22579999 9999999999999999999999 99988777653321 22 3
Q ss_pred eecCCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeCCch-------hhhhhccccCCCCCccEE
Q 021218 163 TEENGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVI 233 (316)
Q Consensus 163 ~~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~aGv~-------l~~l~~~~~~~~~~i~vI 233 (316)
.. ..+++|++++||+|++|+|.+..++ ++. +.++.||+|++|++++-.. ...+++ +..-...++|+
T Consensus 186 ~~----~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~-g~i~gA~lDVf 260 (404)
T 1sc6_A 186 TQ----VQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALAS-KHLAGAAIDVF 260 (404)
T ss_dssp EE----CSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHT-TSEEEEEEEC-
T ss_pred ee----cCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHc-CCccEEEEeec
Confidence 21 3589999999999999999998765 774 7889999999999875321 223332 11112356788
Q ss_pred EeccCCCchh-hHHHHhcCccccCCCceEEEeeccC-CCHHHHH
Q 021218 234 AVCPKGMGPS-VRRLYVQGKEINGAGINSSFAVHQD-VDGRATN 275 (316)
Q Consensus 234 ~vhPn~pg~~-~r~lf~~G~e~~G~G~~~iiap~~d-~~~~a~e 275 (316)
..+|..+... ...|+.. -|+++|||-. .+.++.+
T Consensus 261 ~~EP~~~~~~~~~pL~~~--------~nvilTPHi~~~T~ea~~ 296 (404)
T 1sc6_A 261 PTEPATNSDPFTSPLAEF--------DNVLLTPHIGGSTQEAQE 296 (404)
T ss_dssp --------CTTTGGGTTC--------TTEEEECCCSCCSHHHHH
T ss_pred CCCCCCccccccchhhcC--------CCEEECCCCCCCcHHHHH
Confidence 8888443211 1123332 4799999874 4455544
No 39
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=99.53 E-value=1.2e-14 Score=143.55 Aligned_cols=166 Identities=17% Similarity=0.138 Sum_probs=110.1
Q ss_pred cccchhhHHhhcCCccccc-cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCce
Q 021218 85 SLADRDEYIVRGGRDLFNL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFT 163 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~F~~-~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~ 163 (316)
++..+++.+ ++|+|.-.. ...+|.| |+|||||+|.||.++|+.++.+ |++|+++++..... ..+..
T Consensus 131 ~i~~~~~~~-~~g~W~~~~~~~~el~g-ktvGIIGlG~IG~~vA~~l~~~------G~~V~~yd~~~~~~-----~~~~~ 197 (416)
T 3k5p_A 131 RIFPRSVSA-HAGGWEKTAIGSREVRG-KTLGIVGYGNIGSQVGNLAESL------GMTVRYYDTSDKLQ-----YGNVK 197 (416)
T ss_dssp THHHHHHHH-HTTCCCCCCTTCCCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECTTCCCC-----BTTBE
T ss_pred ccHHHHHhh-hcccccccCCCCccCCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCcchhc-----ccCcE
Confidence 355667775 999996422 2579999 9999999999999999999999 99988777653211 11222
Q ss_pred ecCCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeC-Cch------hhhhhccccCCCCCccEEE
Q 021218 164 EENGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIA 234 (316)
Q Consensus 164 ~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~a-Gv~------l~~l~~~~~~~~~~i~vI~ 234 (316)
. ..+++|++++||+|++|+|.+..++ ++. +.++.||+|++|++++ |-. ...+++ +......++|..
T Consensus 198 ~----~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~-g~i~gAalDVf~ 272 (416)
T 3k5p_A 198 P----AASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQE-GHLAGAAIDVFP 272 (416)
T ss_dssp E----CSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHT-TSEEEEEECCCS
T ss_pred e----cCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHc-CCccEEEeCCCC
Confidence 1 4589999999999999999999876 664 7899999999999875 321 223433 112223566666
Q ss_pred eccCCCchhh-HHHHhcCccccCCCceEEEeec-cCCCHHHHHH
Q 021218 235 VCPKGMGPSV-RRLYVQGKEINGAGINSSFAVH-QDVDGRATNV 276 (316)
Q Consensus 235 vhPn~pg~~~-r~lf~~G~e~~G~G~~~iiap~-~d~~~~a~e~ 276 (316)
.+|..+.... ..|+.. -|++++|| ...+.++.+.
T Consensus 273 ~EP~~~~~~~~~pL~~~--------~nvilTPHig~~T~ea~~~ 308 (416)
T 3k5p_A 273 VEPASNGERFSTPLQGL--------ENVILTPHIGGSTEEAQER 308 (416)
T ss_dssp SCCSSTTSCCCCTTTTC--------TTEEECCSCTTCCHHHHHH
T ss_pred CCCCCcccccchhHhcC--------CCEEECCCCCCCCHHHHHH
Confidence 7775443211 112221 47899999 4666666554
No 40
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.52 E-value=2.1e-13 Score=126.98 Aligned_cols=153 Identities=15% Similarity=0.153 Sum_probs=113.0
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHH-----------HHCCceecC-------------
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA-----------RAAGFTEEN------------- 166 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A-----------~~~G~~~~~------------- 166 (316)
|++|+|||.|.||.++|..+.+. |++|++.+++. ...+.+ .+.|.....
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~------G~~V~~~d~~~-~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~ 87 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT------GHTVVLVDQTE-DILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLST 87 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH-HHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCH-HHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhc
Confidence 48999999999999999999998 99987776653 323222 123421000
Q ss_pred -CCcCCHHhhhccCCEEEEcccCchH--HHHHHHHHhcCCCCcEEE-EeCCchhhhhhccccCCCCCccEEEeccCCCch
Q 021218 167 -GTLGDIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGP 242 (316)
Q Consensus 167 -~t~~~~~e~i~~ADIViLavp~~~~--~~vi~ei~~~mk~gaiLi-d~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~ 242 (316)
....++++++++||+||+++|.+.. ..++.++.++++++++|+ .++|+.+..+.. .++..-++++.||+.|..
T Consensus 88 i~~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~~---~~~~~~~~~g~h~~~P~~ 164 (302)
T 1f0y_A 88 IATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIAN---ATTRQDRFAGLHFFNPVP 164 (302)
T ss_dssp EEEESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHHHHT---TSSCGGGEEEEEECSSTT
T ss_pred eEEecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHH---hcCCcccEEEEecCCCcc
Confidence 0134777789999999999998764 357888989999999876 567877666654 333345799999988765
Q ss_pred hhHHHHhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCC
Q 021218 243 SVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 243 ~~r~lf~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
. + ....+++....+++..+.+.++++.+|..
T Consensus 165 ~-------~-------~~~~i~~g~~~~~e~~~~~~~l~~~~G~~ 195 (302)
T 1f0y_A 165 V-------M-------KLVEVIKTPMTSQKTFESLVDFSKALGKH 195 (302)
T ss_dssp T-------C-------CEEEEECCTTCCHHHHHHHHHHHHHTTCE
T ss_pred c-------C-------ceEEEeCCCCCCHHHHHHHHHHHHHcCCc
Confidence 4 2 24557888889999999999999999953
No 41
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.52 E-value=3.6e-14 Score=130.17 Aligned_cols=131 Identities=13% Similarity=0.043 Sum_probs=102.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCchH
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~~ 191 (316)
|+|+|||.|+||.++|++|++. |++|...++. ++ +++|| |+++|++.+
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~------G~~V~~~~~~-----------------------~~-~~~aD--ilavP~~ai 54 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSV------GHYVTVLHAP-----------------------ED-IRDFE--LVVIDAHGV 54 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHT------TCEEEECSSG-----------------------GG-GGGCS--EEEECSSCH
T ss_pred cEEEEEeeCHHHHHHHHHHHHC------CCEEEEecCH-----------------------HH-hccCC--EEEEcHHHH
Confidence 7999999999999999999999 9886654431 12 56899 999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEeCC-chhhhhhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEeeccCCC
Q 021218 192 ADNYEKIFSCMKPNSILGLSHG-FLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVD 270 (316)
Q Consensus 192 ~~vi~ei~~~mk~gaiLid~aG-v~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~d~~ 270 (316)
.+++.++.+++++|++|+|++| ++...++. ..+.+..||..|| + + |..+.+++. +
T Consensus 55 ~~vl~~l~~~l~~g~ivvd~sgs~~~~vl~~---~~~~g~~fvg~HP------m-----~-------g~~~~i~a~---d 110 (232)
T 3dfu_A 55 EGYVEKLSAFARRGQMFLHTSLTHGITVMDP---LETSGGIVMSAHP------I-----G-------QDRWVASAL---D 110 (232)
T ss_dssp HHHHHHHHTTCCTTCEEEECCSSCCGGGGHH---HHHTTCEEEEEEE------E-----E-------TTEEEEEES---S
T ss_pred HHHHHHHHHhcCCCCEEEEECCcCHHHHHHH---HHhCCCcEEEeee------C-----C-------CCceeeeCC---C
Confidence 9999999999999999999765 45444443 1134678999999 3 2 245656664 6
Q ss_pred HHHHHHHHHHHHHcCCCCeeecChhHHHh
Q 021218 271 GRATNVALGWSVALGSPFTFATTLEQEYR 299 (316)
Q Consensus 271 ~~a~e~a~~l~~alG~~~~~~tT~~~e~~ 299 (316)
+++++.++.|++.+| .+++.++.++|-.
T Consensus 111 ~~a~~~l~~L~~~lG-~~vv~~~~~~hd~ 138 (232)
T 3dfu_A 111 ELGETIVGLLVGELG-GSIVEIADDKRAQ 138 (232)
T ss_dssp HHHHHHHHHHHHHTT-CEECCCCGGGHHH
T ss_pred HHHHHHHHHHHHHhC-CEEEEeCHHHHhH
Confidence 789999999999999 5677788877643
No 42
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.52 E-value=5.3e-15 Score=141.44 Aligned_cols=151 Identities=11% Similarity=0.087 Sum_probs=106.8
Q ss_pred hhHHhhcCCccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCc
Q 021218 90 DEYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL 169 (316)
Q Consensus 90 ~e~vv~~G~w~F~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~ 169 (316)
++.+ ++|+|.......+|.| ++|||||+|.||.++|+.++.+ |++|+++++..... +.. ...+. .
T Consensus 118 ~~~~-~~~~W~~~~~~~~l~g-ktvGIiGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~~-~~~-~~~~~-----~ 182 (324)
T 3evt_A 118 LNQR-GARQWALPMTTSTLTG-QQLLIYGTGQIGQSLAAKASAL------GMHVIGVNTTGHPA-DHF-HETVA-----F 182 (324)
T ss_dssp HHHT-TTCCSSCSSCCCCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSCCCC-TTC-SEEEE-----G
T ss_pred HHHH-hcCCcccCCCCccccC-CeEEEECcCHHHHHHHHHHHhC------CCEEEEECCCcchh-HhH-hhccc-----c
Confidence 6664 9999964323589999 9999999999999999999999 99988777654321 111 11111 3
Q ss_pred CCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeC-Cch------hhhhhccccCCCCCccEEEeccCCC
Q 021218 170 GDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGM 240 (316)
Q Consensus 170 ~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~a-Gv~------l~~l~~~~~~~~~~i~vI~vhPn~p 240 (316)
.++++++++||+|++|+|.+..++ ++. +.++.||+|++|++++ |-. ...+++ +.......+|...+|..+
T Consensus 183 ~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~-g~i~gA~lDV~~~EPl~~ 261 (324)
T 3evt_A 183 TATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDH-HQLSMAALDVTEPEPLPT 261 (324)
T ss_dssp GGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHT-TSCSEEEESSCSSSSCCT
T ss_pred CCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHh-CCceEEEeCCCCCCCCCC
Confidence 478899999999999999988775 664 7899999999999876 321 233433 222234567777777443
Q ss_pred chhhHHHHhcCccccCCCceEEEeecc
Q 021218 241 GPSVRRLYVQGKEINGAGINSSFAVHQ 267 (316)
Q Consensus 241 g~~~r~lf~~G~e~~G~G~~~iiap~~ 267 (316)
.+. ++.. -|+++|||-
T Consensus 262 ~~p---L~~~--------~nvilTPHi 277 (324)
T 3evt_A 262 DHP---LWQR--------DDVLITPHI 277 (324)
T ss_dssp TCG---GGGC--------SSEEECCSC
T ss_pred CCh---hhcC--------CCEEEcCcc
Confidence 333 3332 478999986
No 43
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=99.52 E-value=3.7e-15 Score=141.94 Aligned_cols=154 Identities=13% Similarity=0.081 Sum_probs=109.3
Q ss_pred ccchhhHHhhcCCccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec
Q 021218 86 LADRDEYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE 165 (316)
Q Consensus 86 l~~~~e~vv~~G~w~F~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~ 165 (316)
+..|++.+ ++|+|... ...+|.| ++|||||+|.||.++|+.++.+ |++|+++++..... .++...
T Consensus 117 ~~~~~~~~-~~g~W~~~-~~~~l~g-~tvGIiG~G~IG~~vA~~l~~~------G~~V~~~dr~~~~~------~~~~~~ 181 (315)
T 3pp8_A 117 FDDYQALK-NQALWKPL-PEYTREE-FSVGIMGAGVLGAKVAESLQAW------GFPLRCWSRSRKSW------PGVESY 181 (315)
T ss_dssp HHHHHHHH-HTTCCCCC-CCCCSTT-CCEEEECCSHHHHHHHHHHHTT------TCCEEEEESSCCCC------TTCEEE
T ss_pred ChHHHHHH-HhcccCCC-CCCCcCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEEcCCchhh------hhhhhh
Confidence 55677775 99999654 3489999 9999999999999999999999 99988777654321 222210
Q ss_pred CCCcCCHHhhhccCCEEEEcccCchHHH-HH-HHHHhcCCCCcEEEEeC-Cch------hhhhhccccCCCCCccEEEec
Q 021218 166 NGTLGDIYETISGSDLVLLLISDAAQAD-NY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVC 236 (316)
Q Consensus 166 ~~t~~~~~e~i~~ADIViLavp~~~~~~-vi-~ei~~~mk~gaiLid~a-Gv~------l~~l~~~~~~~~~~i~vI~vh 236 (316)
....+++|++++||+|++|+|.+..++ ++ .+.++.||+|++|++++ |-. +..+++. .......+|...+
T Consensus 182 -~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g-~i~gA~lDV~~~E 259 (315)
T 3pp8_A 182 -VGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSG-KLKGAMLDVFSQE 259 (315)
T ss_dssp -ESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT-SEEEEEESCCSSS
T ss_pred -cccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhC-CccEEEcCCCCCC
Confidence 011378899999999999999988775 77 48899999999999876 321 2334331 1223456677777
Q ss_pred cCCCchhhHHHHhcCccccCCCceEEEeecc
Q 021218 237 PKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (316)
Q Consensus 237 Pn~pg~~~r~lf~~G~e~~G~G~~~iiap~~ 267 (316)
|..+.+. ++.. -|+++|||-
T Consensus 260 Pl~~~~p---L~~~--------~nvilTPHi 279 (315)
T 3pp8_A 260 PLPQESP---LWRH--------PRVAMTPHI 279 (315)
T ss_dssp SCCTTCG---GGGC--------TTEEECSSC
T ss_pred CCCCCCh---hhcC--------CCEEECCCC
Confidence 7443332 3332 478899986
No 44
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=99.52 E-value=4.1e-15 Score=142.34 Aligned_cols=155 Identities=18% Similarity=0.148 Sum_probs=109.5
Q ss_pred cccchhhHHhhcCCccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCcee
Q 021218 85 SLADRDEYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE 164 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~F~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~ 164 (316)
++..|++.+ ++|+|.-. ...+|.| ++|||||+|.||.++|+.++.+ |++|+++++...... .. .+..
T Consensus 117 ~~~~~~~~~-~~g~W~~~-~~~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~~~-~~--~~~~- 183 (324)
T 3hg7_A 117 QLPLYREQQ-KQRLWQSH-PYQGLKG-RTLLILGTGSIGQHIAHTGKHF------GMKVLGVSRSGRERA-GF--DQVY- 183 (324)
T ss_dssp THHHHHHHH-HTTCCCCC-CCCCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCCT-TC--SEEE-
T ss_pred ChHHHHHHH-hhCCCcCC-CCccccc-ceEEEEEECHHHHHHHHHHHhC------CCEEEEEcCChHHhh-hh--hccc-
Confidence 456677775 99999643 2479999 9999999999999999999999 999887766542211 00 1111
Q ss_pred cCCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeC-Cch------hhhhhccccCCCCCccEEEe
Q 021218 165 ENGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAV 235 (316)
Q Consensus 165 ~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~a-Gv~------l~~l~~~~~~~~~~i~vI~v 235 (316)
...+++|++++||+|++|+|.+..++ ++. +.++.||+|++|++++ |-. ...+++ +......++|...
T Consensus 184 ---~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~-g~i~ga~lDV~~~ 259 (324)
T 3hg7_A 184 ---QLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRT-GKLGMAVLDVFEQ 259 (324)
T ss_dssp ---CGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHT-TSSSEEEESCCSS
T ss_pred ---ccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHc-CCceEEEeccCCC
Confidence 13578999999999999999988765 665 7889999999999876 321 223443 2222345677777
Q ss_pred ccCCCchhhHHHHhcCccccCCCceEEEeecc
Q 021218 236 CPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (316)
Q Consensus 236 hPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~ 267 (316)
+|..+.+. ++.. -|+++|||-
T Consensus 260 EPl~~~~p---L~~~--------~nvilTPHi 280 (324)
T 3hg7_A 260 EPLPADSP---LWGQ--------PNLIITPHN 280 (324)
T ss_dssp SSCCTTCT---TTTC--------TTEEECCSC
T ss_pred CCCCCCCh---hhcC--------CCEEEeCCC
Confidence 88443332 2322 478999986
No 45
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.51 E-value=2.6e-14 Score=136.98 Aligned_cols=161 Identities=20% Similarity=0.272 Sum_probs=111.5
Q ss_pred cccchhhHHhhcCCccccc--cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCc
Q 021218 85 SLADRDEYIVRGGRDLFNL--LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF 162 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~F~~--~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~ 162 (316)
++..+++.+ |+|+|.... ...+|.| ++|||||+|.||.++|+.++.+ |++|+++++..... .|+
T Consensus 138 ~~~~~~~~~-~~g~w~~~~~~~~~~l~g-~~vgIIG~G~iG~~vA~~l~~~------G~~V~~~dr~~~~~------~g~ 203 (333)
T 3ba1_A 138 RICECDKYV-RRGAWKFGDFKLTTKFSG-KRVGIIGLGRIGLAVAERAEAF------DCPISYFSRSKKPN------TNY 203 (333)
T ss_dssp THHHHHHHH-HTTGGGGCCCCCCCCCTT-CCEEEECCSHHHHHHHHHHHTT------TCCEEEECSSCCTT------CCS
T ss_pred CHHHHHHHH-HcCCCCccccccccccCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEECCCchhc------cCc
Confidence 355677775 999996321 2479999 9999999999999999999999 99988777654321 254
Q ss_pred eecCCCcCCHHhhhccCCEEEEcccCchHH-HHH-HHHHhcCCCCcEEEEeCCch-------hhhhhccccCCCCCccEE
Q 021218 163 TEENGTLGDIYETISGSDLVLLLISDAAQA-DNY-EKIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVI 233 (316)
Q Consensus 163 ~~~~~t~~~~~e~i~~ADIViLavp~~~~~-~vi-~ei~~~mk~gaiLid~aGv~-------l~~l~~~~~~~~~~i~vI 233 (316)
.. ..++++++++||+|++++|++..+ .++ ++.++.||++++|++++... ...+++ +.......+|+
T Consensus 204 ~~----~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~-g~i~ga~lDv~ 278 (333)
T 3ba1_A 204 TY----YGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVE-GRLGGAGLDVF 278 (333)
T ss_dssp EE----ESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHH-TSSCEEEESCC
T ss_pred ee----cCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHc-CCCeEEEEecC
Confidence 42 458899999999999999998765 477 46888999999999765322 122332 11112245677
Q ss_pred EeccCCCchhhHHHHhcCccccCCCceEEEeeccC-CCHHHHHH
Q 021218 234 AVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNV 276 (316)
Q Consensus 234 ~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~d-~~~~a~e~ 276 (316)
..+|. +. ..++.. -|++++||.. .+.++.+.
T Consensus 279 ~~EP~-~~---~~L~~~--------~nviltPH~~~~t~e~~~~ 310 (333)
T 3ba1_A 279 EREPE-VP---EKLFGL--------ENVVLLPHVGSGTVETRKV 310 (333)
T ss_dssp TTTTC-CC---GGGGGC--------TTEEECSSCTTCSHHHHHH
T ss_pred CCCCC-Cc---chhhcC--------CCEEECCcCCCCCHHHHHH
Confidence 77783 22 234443 5789999863 34444443
No 46
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.51 E-value=3.4e-14 Score=136.99 Aligned_cols=166 Identities=17% Similarity=0.085 Sum_probs=114.2
Q ss_pred cccchhhHHhhcCCcccc-----c---cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHH
Q 021218 85 SLADRDEYIVRGGRDLFN-----L---LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE 156 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~F~-----~---~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~ 156 (316)
++..|++.+ |+|+|... . ...++.| ++|||||+|.||.++|+.++++ |++|+++++...+. .
T Consensus 136 ~~~~~~~~~-~~g~w~~~~~~~~~~~~~~~~l~g-~tvGIIG~G~IG~~vA~~l~~~------G~~V~~~d~~~~~~--~ 205 (347)
T 1mx3_A 136 RATWLHQAL-REGTRVQSVEQIREVASGAARIRG-ETLGIIGLGRVGQAVALRAKAF------GFNVLFYDPYLSDG--V 205 (347)
T ss_dssp CHHHHHHHH-HTTCCCCSHHHHHHHTTTCCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECTTSCTT--H
T ss_pred hHHHHHHHH-HcCCcccccccccccccCccCCCC-CEEEEEeECHHHHHHHHHHHHC------CCEEEEECCCcchh--h
Confidence 356677775 99999421 1 1258999 9999999999999999999999 99988777654332 3
Q ss_pred HHHCCceecCCCcCCHHhhhccCCEEEEcccCchHHH-HH-HHHHhcCCCCcEEEEeCCch-------hhhhhccccCCC
Q 021218 157 ARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQAD-NY-EKIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFP 227 (316)
Q Consensus 157 A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi-~ei~~~mk~gaiLid~aGv~-------l~~l~~~~~~~~ 227 (316)
+.+.|+.. ..+++|++++||+|++++|++..++ ++ ++.++.||+|++|++++-.. ...+++.++. .
T Consensus 206 ~~~~g~~~----~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~-g 280 (347)
T 1mx3_A 206 ERALGLQR----VSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIR-G 280 (347)
T ss_dssp HHHHTCEE----CSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEE-E
T ss_pred HhhcCCee----cCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCc-E
Confidence 44556642 3478999999999999999987654 77 47889999999999875322 2233332111 2
Q ss_pred CCccEEEeccCCC-chhhHHHHhcCccccCCCceEEEeeccC-CCHHHHHH
Q 021218 228 KNIGVIAVCPKGM-GPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNV 276 (316)
Q Consensus 228 ~~i~vI~vhPn~p-g~~~r~lf~~G~e~~G~G~~~iiap~~d-~~~~a~e~ 276 (316)
...+|+..+|... .+. ++. --|++++||-. .+.++.+.
T Consensus 281 A~lDV~~~EP~~~~~~~---L~~--------~~nvi~tPHia~~t~~~~~~ 320 (347)
T 1mx3_A 281 AALDVHESEPFSFSQGP---LKD--------APNLICTPHAAWYSEQASIE 320 (347)
T ss_dssp EEESCCSSSSCCTTSST---TTT--------CSSEEECSSCTTCCHHHHHH
T ss_pred EEEeecccCCCCCCCch---HHh--------CCCEEEEchHHHHHHHHHHH
Confidence 3467777888321 111 222 25899999864 34444443
No 47
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=99.50 E-value=2.9e-14 Score=137.37 Aligned_cols=165 Identities=17% Similarity=0.077 Sum_probs=113.7
Q ss_pred ccchhhHHhh-cCCccc--cccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCc
Q 021218 86 LADRDEYIVR-GGRDLF--NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF 162 (316)
Q Consensus 86 l~~~~e~vv~-~G~w~F--~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~ 162 (316)
+..|++.+ | +|+|.+ .....+|.| ++|||||+|.||+++|+.++.+ |++|+++++.... ..+.++
T Consensus 122 ~~~~~~~~-~~~g~~~w~~~~~~~~l~g-ktvgIiGlG~IG~~vA~~l~~~------G~~V~~~d~~~~~----~~~~~~ 189 (343)
T 2yq5_A 122 IGEFRYRM-DHDHDFTWPSNLISNEIYN-LTVGLIGVGHIGSAVAEIFSAM------GAKVIAYDVAYNP----EFEPFL 189 (343)
T ss_dssp HHHHHHHH-HHHCCCCCCGGGCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCG----GGTTTC
T ss_pred hHHHHHHH-HHcCCcccccCCCccccCC-CeEEEEecCHHHHHHHHHHhhC------CCEEEEECCChhh----hhhccc
Confidence 55567775 8 887754 233689999 9999999999999999999999 9998877766432 122233
Q ss_pred eecCCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeC-Cch------hhhhhccccCCCCCccEE
Q 021218 163 TEENGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVI 233 (316)
Q Consensus 163 ~~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~a-Gv~------l~~l~~~~~~~~~~i~vI 233 (316)
. ..+++|++++||+|++|+|.+..++ ++. +.++.||+|++|++++ |-. ...+++ +.......+|.
T Consensus 190 ~-----~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~-g~i~gA~LDV~ 263 (343)
T 2yq5_A 190 T-----YTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQD-GEIAGAGLDTL 263 (343)
T ss_dssp E-----ECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHH-TSSSCEEESCC
T ss_pred c-----ccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHc-CCCcEEEeccc
Confidence 3 3489999999999999999988765 664 7899999999999876 321 233443 22223466777
Q ss_pred EeccCC-Cch--------h-hHHHHhcCccccCCCceEEEeecc-CCCHHHHHH
Q 021218 234 AVCPKG-MGP--------S-VRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNV 276 (316)
Q Consensus 234 ~vhPn~-pg~--------~-~r~lf~~G~e~~G~G~~~iiap~~-d~~~~a~e~ 276 (316)
...|.. |.. . ...|+.. -|+++|||- ..+.++.+.
T Consensus 264 ~~EP~~~~~~~~~~~~l~~~~~pL~~~--------~nvilTPHia~~t~ea~~~ 309 (343)
T 2yq5_A 264 AGESSYFGHTGLTDSEIPEDYKTLAKM--------PNVVITPHSAFYTETSIRN 309 (343)
T ss_dssp TTGGGTTTCCSCCTTTSCHHHHHHTTC--------TTEEECSSCTTCBHHHHHH
T ss_pred ccCCCccccccccccccccchhHHhcC--------CCEEECCccccchHHHHHH
Confidence 777721 110 0 1234443 479999986 345555443
No 48
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.50 E-value=7.4e-14 Score=131.39 Aligned_cols=150 Identities=12% Similarity=0.040 Sum_probs=105.6
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCC-cccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccC
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-SRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~-~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~ 188 (316)
|++|||||+|+||.++|++|.+. |+ +|.+++++. ++..+.+.+.|+.. ..++.|++++||+||+++|+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~------G~~~V~~~dr~~~~~~~~~~~~~g~~~----~~~~~e~~~~aDvVi~~vp~ 93 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA------GAIDMAAYDAASAESWRPRAEELGVSC----KASVAEVAGECDVIFSLVTA 93 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH------SCCEEEEECSSCHHHHHHHHHHTTCEE----CSCHHHHHHHCSEEEECSCT
T ss_pred CCEEEEECccHHHHHHHHHHHHC------CCCeEEEEcCCCCHHHHHHHHHCCCEE----eCCHHHHHhcCCEEEEecCc
Confidence 38999999999999999999999 98 888777752 45566777788764 56889999999999999999
Q ss_pred chHHHHHHHHHhcCCCCcEEEEeCCchhhhhhccccCC-CC--CccEEEeccCCCchhhHHHHhcCccccCCCceEEEee
Q 021218 189 AAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDF-PK--NIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (316)
Q Consensus 189 ~~~~~vi~ei~~~mk~gaiLid~aGv~l~~l~~~~~~~-~~--~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap 265 (316)
+...++++++.+.++++++|+|.+++...........+ .. ++.|+.. |-..+... ..| ...+++.
T Consensus 94 ~~~~~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~-pv~g~~~~----~~g-------~l~i~vg 161 (312)
T 3qsg_A 94 QAALEVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAV-AVMSAVKP----HGH-------RVPLVVD 161 (312)
T ss_dssp TTHHHHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEE-EECSCSTT----TGG-------GSEEEEE
T ss_pred hhHHHHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEec-cccCCchh----hcC-------CEEEEec
Confidence 99999999999999999999998876522111000011 11 5666652 31111110 012 2344555
Q ss_pred ccCCCHHHHHHHHHHHHHcCCC
Q 021218 266 HQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 266 ~~d~~~~a~e~a~~l~~alG~~ 287 (316)
.++. +.++.+++.+|.+
T Consensus 162 g~~~-----~~~~~ll~~~g~~ 178 (312)
T 3qsg_A 162 GDGA-----RRFQAAFTLYGCR 178 (312)
T ss_dssp STTH-----HHHHHHHHTTTCE
T ss_pred CChH-----HHHHHHHHHhCCC
Confidence 5432 7788999999954
No 49
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.50 E-value=4.4e-14 Score=134.91 Aligned_cols=162 Identities=20% Similarity=0.235 Sum_probs=111.2
Q ss_pred ccchhhHHhhcCCcc-----cc---ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHH
Q 021218 86 LADRDEYIVRGGRDL-----FN---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA 157 (316)
Q Consensus 86 l~~~~e~vv~~G~w~-----F~---~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A 157 (316)
+..+++.+ ++|+|. +. +...+|.| ++|||||+|.||.++|+.++.+ |++|++.++.... +.+
T Consensus 119 ~~~~~~~~-~~~~w~~~~~~~~~~~~~~~~l~g-~~vgIIG~G~iG~~iA~~l~~~------G~~V~~~d~~~~~--~~~ 188 (334)
T 2dbq_A 119 VVKGDRFV-RSGEWKKRGVAWHPKWFLGYDVYG-KTIGIIGLGRIGQAIAKRAKGF------NMRILYYSRTRKE--EVE 188 (334)
T ss_dssp HHHHHHHH-HTSHHHHTTCCCCTTTTCCCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCH--HHH
T ss_pred HHHHHHHH-HcCCCcccccccccccccccCCCC-CEEEEEccCHHHHHHHHHHHhC------CCEEEEECCCcch--hhH
Confidence 55567775 999995 31 12468999 9999999999999999999999 9998777665443 445
Q ss_pred HHCCceecCCCcCCHHhhhccCCEEEEcccCchHH-HHHH-HHHhcCCCCcEEEEeC-Cch------hhhhhccccCCCC
Q 021218 158 RAAGFTEENGTLGDIYETISGSDLVLLLISDAAQA-DNYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPK 228 (316)
Q Consensus 158 ~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~~~-~vi~-ei~~~mk~gaiLid~a-Gv~------l~~l~~~~~~~~~ 228 (316)
.+.|+. ..++++++++||+|++|+|++..+ .++. ++++.||++++|++++ |.. ...++. +.....
T Consensus 189 ~~~g~~-----~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~-~~i~ga 262 (334)
T 2dbq_A 189 RELNAE-----FKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKE-GWIAGA 262 (334)
T ss_dssp HHHCCE-----ECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHH-TSSSEE
T ss_pred hhcCcc-----cCCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHh-CCeeEE
Confidence 556765 347889999999999999999865 4664 7889999999999765 321 122332 111112
Q ss_pred CccEEEeccCCCchhhHHHHhcCccccCCCceEEEeeccCC-CHHHHH
Q 021218 229 NIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV-DGRATN 275 (316)
Q Consensus 229 ~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~d~-~~~a~e 275 (316)
..+|...+| +....++.. -|++++||... +.++.+
T Consensus 263 ~lDv~~~EP----~~~~~L~~~--------~~vi~tPh~~~~t~~~~~ 298 (334)
T 2dbq_A 263 GLDVFEEEP----YYNEELFKL--------DNVVLTPHIGSASFGARE 298 (334)
T ss_dssp EESCCSSSS----CCCHHHHHC--------TTEEECSSCTTCSHHHHH
T ss_pred EecCCCCCC----CCCchhhcC--------CCEEECCccCCCcHHHHH
Confidence 344544455 222345653 57999998643 444433
No 50
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.48 E-value=1.8e-13 Score=126.83 Aligned_cols=152 Identities=18% Similarity=0.266 Sum_probs=110.0
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCch
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~ 190 (316)
|++|+|||+|+||.++|++|.+. |++|.+++++ +...+...+.|+.. ..+.+|+++++|+||+++|...
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~------G~~V~~~d~~-~~~~~~~~~~g~~~----~~~~~~~~~~aDvvi~~vp~~~ 71 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKA------GYLLNVFDLV-QSAVDGLVAAGASA----ARSARDAVQGADVVISMLPASQ 71 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT------TCEEEEECSS-HHHHHHHHHTTCEE----CSSHHHHHTTCSEEEECCSCHH
T ss_pred CCEEEEEeecHHHHHHHHHHHhC------CCeEEEEcCC-HHHHHHHHHCCCeE----cCCHHHHHhCCCeEEEECCCHH
Confidence 58999999999999999999999 9988777654 44555666678764 5688999999999999998665
Q ss_pred H-HHHHH---HHHhcCCCCcEEEEeCCchhh---hhhccccCC-CCCccEEEeccCCCchhhHHHHhcCccccCCCceEE
Q 021218 191 Q-ADNYE---KIFSCMKPNSILGLSHGFLLG---HLQSMGLDF-PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSS 262 (316)
Q Consensus 191 ~-~~vi~---ei~~~mk~gaiLid~aGv~l~---~l~~~~~~~-~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~i 262 (316)
. .+++. ++.+.++++++|++++..... .+.. .+ ..++.|+. +|..++... ...| ...
T Consensus 72 ~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~---~~~~~g~~~~~-~pv~~~~~~---~~~g-------~l~- 136 (302)
T 2h78_A 72 HVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHA---AARERGLAMLD-APVSGGTAG---AAAG-------TLT- 136 (302)
T ss_dssp HHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHH---HHHHTTCCEEE-CCEESCHHH---HHHT-------CEE-
T ss_pred HHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHH---HHHHcCCEEEE-EEccCChhh---HhcC-------Cce-
Confidence 4 56887 789999999999987765422 2222 11 23677887 487665541 1122 223
Q ss_pred EeeccCCCHHHHHHHHHHHHHcCCCCee
Q 021218 263 FAVHQDVDGRATNVALGWSVALGSPFTF 290 (316)
Q Consensus 263 iap~~d~~~~a~e~a~~l~~alG~~~~~ 290 (316)
+.+.. +++..+.++.+++.+|.+-+.
T Consensus 137 ~~~~g--~~~~~~~~~~ll~~~g~~~~~ 162 (302)
T 2h78_A 137 FMVGG--DAEALEKARPLFEAMGRNIFH 162 (302)
T ss_dssp EEEES--CHHHHHHHHHHHHHHEEEEEE
T ss_pred EEeCC--CHHHHHHHHHHHHHhCCCeEE
Confidence 23332 678999999999999965433
No 51
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=99.47 E-value=1.1e-13 Score=132.21 Aligned_cols=166 Identities=13% Similarity=0.021 Sum_probs=112.0
Q ss_pred cccchhhHHhhcCCcccc-ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCce
Q 021218 85 SLADRDEYIVRGGRDLFN-LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFT 163 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~F~-~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~ 163 (316)
++..|++.+ |+|+|.+. ....++.| ++|||||+|.||.++|+.++.+ |++|++.++...+. +.+ ++.
T Consensus 121 ~~~~~~~~~-~~g~w~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~---~~~-~~~ 188 (333)
T 1j4a_A 121 QDKAMDEKV-ARHDLRWAPTIGREVRD-QVVGVVGTGHIGQVFMQIMEGF------GAKVITYDIFRNPE---LEK-KGY 188 (333)
T ss_dssp THHHHHHHH-HTTBCCCTTCCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCHH---HHH-TTC
T ss_pred CHHHHHHHH-HcCCCccCCcccccCCC-CEEEEEccCHHHHHHHHHHHHC------CCEEEEECCCcchh---HHh-hCe
Confidence 356677775 99999542 23578999 9999999999999999999999 99987777654332 222 222
Q ss_pred ecCCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeCCch-------hhhhhccccCCCCCccEEE
Q 021218 164 EENGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVIA 234 (316)
Q Consensus 164 ~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~aGv~-------l~~l~~~~~~~~~~i~vI~ 234 (316)
. ..++++++++||+|++|+|.+..++ +++ +.++.||+|++|++++--. ...+++. ..-...++|..
T Consensus 189 ~----~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g-~i~gA~LDV~~ 263 (333)
T 1j4a_A 189 Y----VDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSG-KIFGYAMDVYE 263 (333)
T ss_dssp B----CSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHT-SEEEEEESCCT
T ss_pred e----cCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC-CceEEEEecCC
Confidence 1 2378999999999999999988664 664 6889999999999875321 2233331 12234566666
Q ss_pred eccC--CCc--------hhhHHHHhcCccccCCCceEEEeeccC-CCHHHHH
Q 021218 235 VCPK--GMG--------PSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATN 275 (316)
Q Consensus 235 vhPn--~pg--------~~~r~lf~~G~e~~G~G~~~iiap~~d-~~~~a~e 275 (316)
.+|. .+. +....++.. -|.++|||-- .+.++.+
T Consensus 264 ~EP~~l~~~~~~~~~~~p~~~~L~~~--------~nvilTPHia~~t~~~~~ 307 (333)
T 1j4a_A 264 GEVGIFNEDWEGKEFPDARLADLIAR--------PNVLVTPKTAFYTTHAVR 307 (333)
T ss_dssp TCTTTTTSBCTTSCCSCHHHHHHHHC--------TTEEECSSCTTCBHHHHH
T ss_pred CCCCccccccccccCCccchhhHHhC--------CCEEECCccccCHHHHHH
Confidence 7773 111 111234443 3788999873 3444443
No 52
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.47 E-value=6.9e-14 Score=134.44 Aligned_cols=117 Identities=15% Similarity=0.098 Sum_probs=90.8
Q ss_pred cccchhhHHhhcCC---cc-c----cccccccCCCCEEEEEcccchHHHHHHHHH-hhhhhhcCCcEEEEEecCCcccHH
Q 021218 85 SLADRDEYIVRGGR---DL-F----NLLPDAFNGINQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGSRSFA 155 (316)
Q Consensus 85 ~l~~~~e~vv~~G~---w~-F----~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr-~~~~~~g~G~~Vivg~r~~~~s~~ 155 (316)
++..|++.+ |+|+ |+ . .....+|.| ++|||||+|.||.++|+.++ .+ |++|++.++.. ...+
T Consensus 131 ~~~~~~~~~-~~g~~~~w~~~~~~~~~~~~~l~g-~~vgIIG~G~IG~~vA~~l~~~~------G~~V~~~d~~~-~~~~ 201 (348)
T 2w2k_A 131 LASYSERAA-RTGDPETFNRVHLEIGKSAHNPRG-HVLGAVGLGAIQKEIARKAVHGL------GMKLVYYDVAP-ADAE 201 (348)
T ss_dssp THHHHHHHH-TTCCHHHHHHHHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHHHTT------CCEEEEECSSC-CCHH
T ss_pred ChHHHHHHH-HcCCCcccccccccccccCcCCCC-CEEEEEEECHHHHHHHHHHHHhc------CCEEEEECCCC-cchh
Confidence 356677775 9999 93 1 122478999 99999999999999999999 88 99987666553 3344
Q ss_pred HHHHCCceecCCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeCCc
Q 021218 156 EARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSHGF 214 (316)
Q Consensus 156 ~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~aGv 214 (316)
.+.+.|+.. ..++++++++||+|++|+|++..++ ++. ++++.||++++|++++..
T Consensus 202 ~~~~~g~~~----~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg 258 (348)
T 2w2k_A 202 TEKALGAER----VDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARG 258 (348)
T ss_dssp HHHHHTCEE----CSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCG
T ss_pred hHhhcCcEE----eCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence 455557653 3478899999999999999988654 664 788899999999987643
No 53
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.47 E-value=1.4e-12 Score=130.25 Aligned_cols=156 Identities=14% Similarity=0.178 Sum_probs=117.0
Q ss_pred CCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcc-------cHHHHHHCCceecC---------CCcCCHH
Q 021218 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR-------SFAEARAAGFTEEN---------GTLGDIY 173 (316)
Q Consensus 110 G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~-------s~~~A~~~G~~~~~---------~t~~~~~ 173 (316)
-|++|+|||.|.||.++|+.+.+. |++|++.+++.++ ..+.+.+.|...+. ....++
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~a------G~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl- 125 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLA------GIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDF- 125 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCG-
T ss_pred cCCEEEEECCCHHHHHHHHHHHHC------CCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCH-
Confidence 348999999999999999999999 9998887766442 12334455542100 012355
Q ss_pred hhhccCCEEEEcccCchHH--HHHHHHHhcCCCCcEEE-EeCCchhhhhhccccCCCCCccEEEeccCCCchhhHHHHhc
Q 021218 174 ETISGSDLVLLLISDAAQA--DNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQ 250 (316)
Q Consensus 174 e~i~~ADIViLavp~~~~~--~vi~ei~~~mk~gaiLi-d~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~ 250 (316)
+.+++||+||.++|.+... +++.++.+.++++++|+ .++++.+..+.. .+....+|++.||..|.+.+
T Consensus 126 ~al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ia~---~~~~p~r~iG~HffnPv~~m------ 196 (460)
T 3k6j_A 126 HKLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISS---VLRDPSNLVGIHFFNPANVI------ 196 (460)
T ss_dssp GGCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHHT---TSSSGGGEEEEECCSSTTTC------
T ss_pred HHHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHHHH---hccCCcceEEEEecchhhhC------
Confidence 4789999999999987644 48889999999999986 567777777665 33344689999998877652
Q ss_pred CccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCCCe
Q 021218 251 GKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT 289 (316)
Q Consensus 251 G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~~~ 289 (316)
...-|++...++++.++.+..+++.+|..-+
T Consensus 197 --------~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~v 227 (460)
T 3k6j_A 197 --------RLVEIIYGSHTSSQAIATAFQACESIKKLPV 227 (460)
T ss_dssp --------CEEEEECCSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred --------CEEEEEeCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 2455788889999999999999999995443
No 54
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.46 E-value=1.9e-13 Score=130.20 Aligned_cols=159 Identities=18% Similarity=0.113 Sum_probs=109.2
Q ss_pred cccchhhHHhhcCCcc-cc---ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC
Q 021218 85 SLADRDEYIVRGGRDL-FN---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA 160 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~-F~---~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~ 160 (316)
++..+++.+ |+|+|. +. +...++.| ++|||||+|.||.++|+.++.+ |++|++.+++.+ ..+.+.+.
T Consensus 127 ~~~~~~~~~-~~~~w~~~~~~~~~~~~l~g-~~vgIIG~G~iG~~iA~~l~~~------G~~V~~~d~~~~-~~~~~~~~ 197 (330)
T 2gcg_A 127 RLPEAIEEV-KNGGWTSWKPLWLCGYGLTQ-STVGIIGLGRIGQAIARRLKPF------GVQRFLYTGRQP-RPEEAAEF 197 (330)
T ss_dssp THHHHHHHH-HTTCCCSCCTTSSCBCCCTT-CEEEEECCSHHHHHHHHHHGGG------TCCEEEEESSSC-CHHHHHTT
T ss_pred CHHHHHHHH-HcCCCcccCcccccCcCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCCc-chhHHHhc
Confidence 355567775 999995 22 22478999 9999999999999999999998 999877776543 34445566
Q ss_pred CceecCCCcCCHHhhhccCCEEEEcccCchHHH-HH-HHHHhcCCCCcEEEEeCCch-------hhhhhccccCCCCCcc
Q 021218 161 GFTEENGTLGDIYETISGSDLVLLLISDAAQAD-NY-EKIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIG 231 (316)
Q Consensus 161 G~~~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi-~ei~~~mk~gaiLid~aGv~-------l~~l~~~~~~~~~~i~ 231 (316)
|+.. .++++++++||+|++|+|++..++ ++ .++++.||+|++|++++... ...+++.. ......+
T Consensus 198 g~~~-----~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~-i~ga~lD 271 (330)
T 2gcg_A 198 QAEF-----VSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGK-IAAAGLD 271 (330)
T ss_dssp TCEE-----CCHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTS-SSEEEES
T ss_pred Ccee-----CCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCC-ccEEEeC
Confidence 7653 378899999999999999987654 66 47888999999999775432 11233211 1112345
Q ss_pred EEEeccCCCchhhHHHHhcCccccCCCceEEEeeccCC
Q 021218 232 VIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV 269 (316)
Q Consensus 232 vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~d~ 269 (316)
|...+|-.+.+. ++.. -|++++||-..
T Consensus 272 v~~~epl~~~~~---l~~~--------~nvi~tPh~~~ 298 (330)
T 2gcg_A 272 VTSPEPLPTNHP---LLTL--------KNCVILPHIGS 298 (330)
T ss_dssp CCSSSSCCTTCG---GGGC--------TTEEECCSCTT
T ss_pred CCCCCCCCCCCh---hhcC--------CCEEECCCCCC
Confidence 555566332322 3332 47889998643
No 55
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=99.46 E-value=1.1e-13 Score=132.14 Aligned_cols=168 Identities=14% Similarity=0.007 Sum_probs=113.1
Q ss_pred cccchhhHHhhcCCccc--cccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCc
Q 021218 85 SLADRDEYIVRGGRDLF--NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF 162 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~F--~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~ 162 (316)
++..|++.+ |+|+|.+ .+...++.| ++|||||+|.||.++|+.++.+ |++|++.++...+. + +.++
T Consensus 120 ~~~~~~~~~-~~g~w~~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~---~-~~~~ 187 (331)
T 1xdw_A 120 HTAYTTSRT-AKKNFKVDAFMFSKEVRN-CTVGVVGLGRIGRVAAQIFHGM------GATVIGEDVFEIKG---I-EDYC 187 (331)
T ss_dssp THHHHHHHH-TTTCCCCCSTTCCCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCS---C-TTTC
T ss_pred CHHHHHHHH-HcCCCccccCcCccCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCccHH---H-Hhcc
Confidence 356677775 9999864 223578999 9999999999999999999999 99988777654432 1 1222
Q ss_pred eecCCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeCCch-------hhhhhccccCCCCCccEE
Q 021218 163 TEENGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVI 233 (316)
Q Consensus 163 ~~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~aGv~-------l~~l~~~~~~~~~~i~vI 233 (316)
. ..++++++++||+|++|+|.+..++ +++ +.++.||+|++|++++--. ...+++.. .-...++|.
T Consensus 188 ~-----~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~-i~gA~LDV~ 261 (331)
T 1xdw_A 188 T-----QVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGK-LGGYGCDVL 261 (331)
T ss_dssp E-----ECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTS-EEEEEESCC
T ss_pred c-----cCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCC-ceEEEEecC
Confidence 2 3488999999999999999987664 674 7889999999999875321 22333311 223456677
Q ss_pred EeccCC-C---------chhhHHHHhcCccccCCCceEEEeeccC-CCHHHHHHH
Q 021218 234 AVCPKG-M---------GPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNVA 277 (316)
Q Consensus 234 ~vhPn~-p---------g~~~r~lf~~G~e~~G~G~~~iiap~~d-~~~~a~e~a 277 (316)
..+|.. | .+....|+.. .-|.++|||-- .+.++.+.+
T Consensus 262 ~~EP~~~~~~~~~~~~~~~~~~~L~~~-------~~nvilTPHia~~t~~~~~~~ 309 (331)
T 1xdw_A 262 DGEASVFGKDLEGQKLENPLFEKLVDL-------YPRVLITPHLGSYTDEAVKNM 309 (331)
T ss_dssp TTGGGTTTCCCTTSCCSSHHHHHHHHT-------TTTEEECCSCTTCSHHHHHHH
T ss_pred CCCCCcccccccccccCccchHHHHhC-------CCCEEEcCccccChHHHHHHH
Confidence 777731 1 1111234432 02688999873 345554433
No 56
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.46 E-value=9.3e-13 Score=119.75 Aligned_cols=161 Identities=15% Similarity=0.146 Sum_probs=108.8
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcE-EEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEc
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIV-VKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~-Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLa 185 (316)
.+++ ++|+|||+|.||.++++.|.+. |++ |.+.+++.++..+.+.+.|+.. ..+.+++++++|+|+++
T Consensus 7 ~~~~-m~i~iiG~G~mG~~~a~~l~~~------g~~~v~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~Dvvi~a 75 (266)
T 3d1l_A 7 SIED-TPIVLIGAGNLATNLAKALYRK------GFRIVQVYSRTEESARELAQKVEAEY----TTDLAEVNPYAKLYIVS 75 (266)
T ss_dssp CGGG-CCEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSHHHHHHHHHHTTCEE----ESCGGGSCSCCSEEEEC
T ss_pred CCCC-CeEEEEcCCHHHHHHHHHHHHC------CCeEEEEEeCCHHHHHHHHHHcCCce----eCCHHHHhcCCCEEEEe
Confidence 4566 8999999999999999999998 887 5555554333333334447653 45788889999999999
Q ss_pred ccCchHHHHHHHHHhcCCCCcEEEEeC-CchhhhhhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEe
Q 021218 186 ISDAAQADNYEKIFSCMKPNSILGLSH-GFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (316)
Q Consensus 186 vp~~~~~~vi~ei~~~mk~gaiLid~a-Gv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iia 264 (316)
+|++...++++++.+.++++++|++.+ |.....+.. .++. .. ..||-.|-.. +......+.++++
T Consensus 76 v~~~~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~l~~---~~~~-~~--~~~~~~~~~g-------~~~~~~~~~~~~v- 141 (266)
T 3d1l_A 76 LKDSAFAELLQGIVEGKREEALMVHTAGSIPMNVWEG---HVPH-YG--VFYPMQTFSK-------QREVDFKEIPFFI- 141 (266)
T ss_dssp CCHHHHHHHHHHHHTTCCTTCEEEECCTTSCGGGSTT---TCSS-EE--EEEECCCC----------CCCCCTTCCEEE-
T ss_pred cCHHHHHHHHHHHHhhcCCCcEEEECCCCCchHHHHH---HHHh-cc--CcCCceecCC-------CchhhcCCCeEEE-
Confidence 999988889999999999999988765 555444443 3332 11 2455443111 0001113355544
Q ss_pred eccCCCHHHHHHHHHHHHHcCCCCeeecChh
Q 021218 265 VHQDVDGRATNVALGWSVALGSPFTFATTLE 295 (316)
Q Consensus 265 p~~d~~~~a~e~a~~l~~alG~~~~~~tT~~ 295 (316)
...+++..+.++.+++.+|. +++....+
T Consensus 142 --~~~~~~~~~~~~~l~~~~g~-~~~~~~~~ 169 (266)
T 3d1l_A 142 --EASSTEDAAFLKAIASTLSN-RVYDADSE 169 (266)
T ss_dssp --EESSHHHHHHHHHHHHTTCS-CEEECCHH
T ss_pred --ecCCHHHHHHHHHHHHhcCC-cEEEeCHH
Confidence 33567889999999999995 55656544
No 57
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.45 E-value=4e-13 Score=117.87 Aligned_cols=153 Identities=14% Similarity=0.074 Sum_probs=109.7
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCC-------ceecCCCcCCHHhhhccCCEEE
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-------FTEENGTLGDIYETISGSDLVL 183 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G-------~~~~~~t~~~~~e~i~~ADIVi 183 (316)
|+|+||| .|.||.++++.|.+. |++|.+.+|+.++..+...+.+ +. ..+.+++++++|+|+
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~D~Vi 69 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL------GHEIVVGSRREEKAEAKAAEYRRIAGDASIT-----GMKNEDAAEACDIAV 69 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT------TCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-----EEEHHHHHHHCSEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHhccccccCCCC-----hhhHHHHHhcCCEEE
Confidence 5899999 999999999999998 8888877765433222222222 22 236778899999999
Q ss_pred EcccCchHHHHHHHHHhcCCCCcEEEEe-CCch--------------hhhhhccccCCCCCccEEEeccCCCchhhHHHH
Q 021218 184 LLISDAAQADNYEKIFSCMKPNSILGLS-HGFL--------------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (316)
Q Consensus 184 Lavp~~~~~~vi~ei~~~mk~gaiLid~-aGv~--------------l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf 248 (316)
+++|++...++++++.+.++ ++++++. .|+. ...+++ .++ +..++++||+.++.......
T Consensus 70 ~~~~~~~~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~---~~~-~~~~v~~~~~~~~~~~~~~~ 144 (212)
T 1jay_A 70 LTIPWEHAIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAE---VLE-SEKVVSALHTIPAARFANLD 144 (212)
T ss_dssp ECSCHHHHHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHH---HHT-CSCEEECCTTCCHHHHHCTT
T ss_pred EeCChhhHHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHH---hCC-CCeEEEEccchHHHHhhCcC
Confidence 99999888888888877774 8888765 4565 345554 344 47899999988887631111
Q ss_pred hcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHc-CCCCe
Q 021218 249 VQGKEINGAGINSSFAVHQDVDGRATNVALGWSVAL-GSPFT 289 (316)
Q Consensus 249 ~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~al-G~~~~ 289 (316)
+.|...++++.+ ++++.+.++++++.+ |...+
T Consensus 145 -------~~~~~~~~~~g~--~~~~~~~v~~l~~~~~G~~~~ 177 (212)
T 1jay_A 145 -------EKFDWDVPVCGD--DDESKKVVMSLISEIDGLRPL 177 (212)
T ss_dssp -------CCCCEEEEEEES--CHHHHHHHHHHHHHSTTEEEE
T ss_pred -------CCCCccEEEECC--cHHHHHHHHHHHHHcCCCCce
Confidence 234445566654 578999999999999 96533
No 58
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.44 E-value=1e-12 Score=131.71 Aligned_cols=153 Identities=13% Similarity=0.146 Sum_probs=116.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH-----------CCceecC---------CCcCC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEEN---------GTLGD 171 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~-----------~G~~~~~---------~t~~~ 171 (316)
++|+|||.|+||.++|+.+.+. |++|++.+++ ++..+.+.+ .|..... ....+
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a------G~~V~l~D~~-~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~ 78 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH------GHQVLLYDIS-AEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTD 78 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEECSC-HHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCeEEEEECC-HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCC
Confidence 7999999999999999999999 9988777655 333434332 3322100 01234
Q ss_pred HHhhhccCCEEEEcccCchHH--HHHHHHHhcCCCCcEEE-EeCCchhhhhhccccCCCCCccEEEeccCCCchhhHHHH
Q 021218 172 IYETISGSDLVLLLISDAAQA--DNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (316)
Q Consensus 172 ~~e~i~~ADIViLavp~~~~~--~vi~ei~~~mk~gaiLi-d~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf 248 (316)
. +.+++||+||+++|++... +++.++.+.++++++|+ +++++.+..+.. .+....++++.||..|.+.+
T Consensus 79 ~-~~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~~ia~---~~~~p~~~ig~hf~~Pa~v~---- 150 (483)
T 3mog_A 79 I-HALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAA---EIKNPERVAGLHFFNPAPVM---- 150 (483)
T ss_dssp G-GGGGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTT---TSSSGGGEEEEEECSSTTTC----
T ss_pred H-HHhcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHHHHHH---HccCccceEEeeecChhhhC----
Confidence 5 4689999999999998653 58889999999999984 788988876665 33445689999999888763
Q ss_pred hcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCCCe
Q 021218 249 VQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT 289 (316)
Q Consensus 249 ~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~~~ 289 (316)
....+++...++++.++.+..+++.+|..-+
T Consensus 151 ----------~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~~v 181 (483)
T 3mog_A 151 ----------KLVEVVSGLATAAEVVEQLCELTLSWGKQPV 181 (483)
T ss_dssp ----------CEEEEEECSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred ----------CeEEEecCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 2456888999999999999999999996433
No 59
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.44 E-value=1.3e-12 Score=123.35 Aligned_cols=144 Identities=13% Similarity=0.097 Sum_probs=109.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC-------CceecCCCcCCHHhhhccCCEEEE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-------GFTEENGTLGDIYETISGSDLVLL 184 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~-------G~~~~~~t~~~~~e~i~~ADIViL 184 (316)
|+|||||+|.||.++|+++. . |++|++.+++ +...+.+.+. ++.. ..++++ +++||+||.
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a------G~~V~v~d~~-~~~~~~~~~~l~~~~~~~i~~----~~~~~~-~~~aDlVie 79 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S------KHEVVLQDVS-EKALEAAREQIPEELLSKIEF----TTTLEK-VKDCDIVME 79 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T------TSEEEEECSC-HHHHHHHHHHSCGGGGGGEEE----ESSCTT-GGGCSEEEE
T ss_pred CeEEEEeeCHHHHHHHHHHH-c------CCEEEEEECC-HHHHHHHHHHHHHHHhCCeEE----eCCHHH-HcCCCEEEE
Confidence 89999999999999999999 9 9998777665 4445555554 4432 335555 899999999
Q ss_pred cccCchHHH--HHHHHHhcCCCCcEEE-EeCCchhhhhhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceE
Q 021218 185 LISDAAQAD--NYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINS 261 (316)
Q Consensus 185 avp~~~~~~--vi~ei~~~mk~gaiLi-d~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~ 261 (316)
++|.....+ ++.++.+. ++++|+ ++++++...+.. ......++++.||--|.+. +...
T Consensus 80 avpe~~~vk~~l~~~l~~~--~~~IlasntSti~~~~~a~---~~~~~~r~~G~Hf~~Pv~~--------------~~lv 140 (293)
T 1zej_A 80 AVFEDLNTKVEVLREVERL--TNAPLCSNTSVISVDDIAE---RLDSPSRFLGVHWMNPPHV--------------MPLV 140 (293)
T ss_dssp CCCSCHHHHHHHHHHHHTT--CCSCEEECCSSSCHHHHHT---TSSCGGGEEEEEECSSTTT--------------CCEE
T ss_pred cCcCCHHHHHHHHHHHhcC--CCCEEEEECCCcCHHHHHH---HhhcccceEeEEecCcccc--------------CCEE
Confidence 999998754 66676554 999885 677887766654 2223357999999655433 2467
Q ss_pred EEeeccCCCHHHHHHHHHHHHHcCCC
Q 021218 262 SFAVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 262 iiap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
.+++...++++.++.++.+++.+|..
T Consensus 141 eiv~g~~t~~~~~~~~~~l~~~lGk~ 166 (293)
T 1zej_A 141 EIVISRFTDSKTVAFVEGFLRELGKE 166 (293)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHTTCE
T ss_pred EEECCCCCCHHHHHHHHHHHHHcCCe
Confidence 78899999999999999999999954
No 60
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.43 E-value=3.4e-13 Score=124.49 Aligned_cols=151 Identities=17% Similarity=0.157 Sum_probs=107.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCc-h
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA-A 190 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~-~ 190 (316)
|+|+|||+|.||.++|++|.+. |++|.+++++. ...+...+.|+.. ..+.+|++++||+|++++|+. .
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~-~~~~~~~~~g~~~----~~~~~~~~~~aDvvi~~vp~~~~ 70 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA------GCSVTIWNRSP-EKAEELAALGAER----AATPCEVVESCPVTFAMLADPAA 70 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSG-GGGHHHHHTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC------CCeEEEEcCCH-HHHHHHHHCCCee----cCCHHHHHhcCCEEEEEcCCHHH
Confidence 7999999999999999999999 99888776654 4455566678764 568999999999999999954 5
Q ss_pred HHHHH---HHHHhcCCCCcEEEEeCCchhhhhhccccCC-CCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEeec
Q 021218 191 QADNY---EKIFSCMKPNSILGLSHGFLLGHLQSMGLDF-PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (316)
Q Consensus 191 ~~~vi---~ei~~~mk~gaiLid~aGv~l~~l~~~~~~~-~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~ 266 (316)
..+++ +++.+.++++++|++.++......+.....+ ..++.|+. +|-..++.. ... |...+++..
T Consensus 71 ~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~---a~~-------g~l~~~~gg 139 (287)
T 3pef_A 71 AEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLE-APVSGSKKP---AED-------GTLIILAAG 139 (287)
T ss_dssp HHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHH---HHH-------TCEEEEEEE
T ss_pred HHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEE-CCCcCCHHH---Hhc-------CCEEEEEeC
Confidence 56688 7888999999999998876532211100011 23567776 774333321 122 233434443
Q ss_pred cCCCHHHHHHHHHHHHHcCCC
Q 021218 267 QDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 267 ~d~~~~a~e~a~~l~~alG~~ 287 (316)
++++.+.++.+++.+|.+
T Consensus 140 ---~~~~~~~~~~ll~~~g~~ 157 (287)
T 3pef_A 140 ---DRNLYDEAMPGFEKMGKK 157 (287)
T ss_dssp ---CHHHHHHHHHHHHHHEEE
T ss_pred ---CHHHHHHHHHHHHHhCCC
Confidence 468999999999999954
No 61
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.43 E-value=4.9e-13 Score=125.39 Aligned_cols=152 Identities=15% Similarity=0.064 Sum_probs=107.1
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCch
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~ 190 (316)
|++|||||+|+||.++|++|.+. |++|.+++++. ...+...+.|... ..+..|++++||+||+++|...
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~------G~~V~~~dr~~-~~~~~l~~~g~~~----~~~~~~~~~~aDvvi~~vp~~~ 89 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKN------GFKVTVWNRTL-SKCDELVEHGASV----CESPAEVIKKCKYTIAMLSDPC 89 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSG-GGGHHHHHTTCEE----CSSHHHHHHHCSEEEECCSSHH
T ss_pred CCEEEEECccHHHHHHHHHHHHC------CCeEEEEeCCH-HHHHHHHHCCCeE----cCCHHHHHHhCCEEEEEcCCHH
Confidence 49999999999999999999999 99888776654 4445556778764 5689999999999999999865
Q ss_pred H-HHHH---HHHHhcCCCCcEEEEeCCchhhhhhccccCC-CCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEee
Q 021218 191 Q-ADNY---EKIFSCMKPNSILGLSHGFLLGHLQSMGLDF-PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (316)
Q Consensus 191 ~-~~vi---~ei~~~mk~gaiLid~aGv~l~~l~~~~~~~-~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap 265 (316)
. .+++ +++.+.++++++|+++++......+.....+ ..++.|+. +|-..+.. .. .. |...+++.
T Consensus 90 ~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~-~pv~g~~~--~a-~~-------g~l~i~~g 158 (310)
T 3doj_A 90 AALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE-GPVSGSKK--PA-ED-------GQLIILAA 158 (310)
T ss_dssp HHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHH--HH-HH-------TCEEEEEE
T ss_pred HHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe-CCCCCChh--HH-hc-------CCeEEEEc
Confidence 4 5577 6788999999999998876532211100011 23566776 67322222 11 12 23444444
Q ss_pred ccCCCHHHHHHHHHHHHHcCCC
Q 021218 266 HQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 266 ~~d~~~~a~e~a~~l~~alG~~ 287 (316)
. ++++.+.++.+++.+|.+
T Consensus 159 g---~~~~~~~~~~ll~~~g~~ 177 (310)
T 3doj_A 159 G---DKALFEESIPAFDVLGKR 177 (310)
T ss_dssp E---CHHHHHHHHHHHHHHEEE
T ss_pred C---CHHHHHHHHHHHHHhCCC
Confidence 3 368999999999999954
No 62
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.43 E-value=2.3e-13 Score=130.05 Aligned_cols=112 Identities=19% Similarity=0.204 Sum_probs=87.6
Q ss_pred cccchhhHHhhcCCccc-c--ccc----cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHH
Q 021218 85 SLADRDEYIVRGGRDLF-N--LLP----DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA 157 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~F-~--~~~----~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A 157 (316)
++..+++.+ |+|+|.- . ... .+|.| ++|||||+|.||.++|+.++++ |++|++.++.... +.+
T Consensus 115 ~~~~~~~~~-~~g~w~~~~~~~~~~~~~~~l~g-~~vgIIG~G~iG~~vA~~l~~~------G~~V~~~d~~~~~--~~~ 184 (333)
T 2d0i_A 115 KIHYADKFI-RRGEWESHAKIWTGFKRIESLYG-KKVGILGMGAIGKAIARRLIPF------GVKLYYWSRHRKV--NVE 184 (333)
T ss_dssp CHHHHHHHH-HTTCCCCHHHHHTTSCCCCCSTT-CEEEEECCSHHHHHHHHHHGGG------TCEEEEECSSCCH--HHH
T ss_pred HHHHHHHHH-HcCCCCcCcccccCCcccCCCCc-CEEEEEccCHHHHHHHHHHHHC------CCEEEEECCCcch--hhh
Confidence 355677775 9999941 1 112 68999 9999999999999999999999 9998777665443 455
Q ss_pred HHCCceecCCCcCCHHhhhccCCEEEEcccCchHH-HHHH-HHHhcCCCCcEEEEeC
Q 021218 158 RAAGFTEENGTLGDIYETISGSDLVLLLISDAAQA-DNYE-KIFSCMKPNSILGLSH 212 (316)
Q Consensus 158 ~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~~~-~vi~-ei~~~mk~gaiLid~a 212 (316)
.+.|+. ..++++++++||+|++|+|++..+ .++. ++++.||++ +|++++
T Consensus 185 ~~~g~~-----~~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~s 235 (333)
T 2d0i_A 185 KELKAR-----YMDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIG 235 (333)
T ss_dssp HHHTEE-----ECCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECS
T ss_pred hhcCce-----ecCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECC
Confidence 566765 237889999999999999999554 4665 678899999 988765
No 63
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.40 E-value=1.4e-12 Score=123.03 Aligned_cols=150 Identities=19% Similarity=0.268 Sum_probs=106.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCch
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~ 190 (316)
|+||||||+|+||..||++|.+. |++|.+++|+. +..+...+.|... ..++.|++++||+|++|+|+.+
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~------G~~v~v~dr~~-~~~~~l~~~Ga~~----a~s~~e~~~~~dvv~~~l~~~~ 71 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKA------GYLLNVFDLVQ-SAVDGLVAAGASA----ARSARDAVQGADVVISMLPASQ 71 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT------TCEEEEECSSH-HHHHHHHHTTCEE----CSSHHHHHTTCSEEEECCSCHH
T ss_pred cCEEEEeeehHHHHHHHHHHHhC------CCeEEEEcCCH-HHHHHHHHcCCEE----cCCHHHHHhcCCceeecCCchH
Confidence 68999999999999999999999 99988887764 4455666778775 6789999999999999999998
Q ss_pred HHH-HHH---HHHhcCCCCcEEEEeCCchhh---hhhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceEEE
Q 021218 191 QAD-NYE---KIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (316)
Q Consensus 191 ~~~-vi~---ei~~~mk~gaiLid~aGv~l~---~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~ii 263 (316)
..+ ++. .+.+.+++|++|+|.+.+... .+.. ..-..++.|+- +|-.=++. .=++| .-. |
T Consensus 72 ~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~--~~~~~G~~~lD-aPVsGg~~---~A~~G-------~L~-i 137 (300)
T 3obb_A 72 HVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHA--AARERGLAMLD-APVSGGTA---GAAAG-------TLT-F 137 (300)
T ss_dssp HHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHH--HHHTTTCEEEE-CCEESCHH---HHHHT-------CEE-E
T ss_pred HHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHH--HHHHcCCEEEe-cCCCCCHH---HHHhC-------CEE-E
Confidence 875 665 378899999999998876422 2221 01134677764 34110111 11233 223 3
Q ss_pred eeccCCCHHHHHHHHHHHHHcCCC
Q 021218 264 AVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 264 ap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
-+.. ++++.+.++.+++.+|.+
T Consensus 138 mvGG--~~~~~~~~~p~l~~~g~~ 159 (300)
T 3obb_A 138 MVGG--DAEALEKARPLFEAMGRN 159 (300)
T ss_dssp EEES--CHHHHHHHHHHHHHHEEE
T ss_pred EEeC--CHHHHHHHHHHHHHhCCC
Confidence 3433 468999999999999954
No 64
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.40 E-value=7.8e-13 Score=123.31 Aligned_cols=150 Identities=19% Similarity=0.163 Sum_probs=106.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCchH
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~~ 191 (316)
++|+|||+|+||.++|++|.+. |++|.+++++ +...+...+.|... ...+++|++++||+||+++|+...
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~-~~~~~~~~~~g~~~---~~~~~~e~~~~aDvvi~~vp~~~~ 77 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA------GLSTWGADLN-PQACANLLAEGACG---AAASAREFAGVVDALVILVVNAAQ 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCSE---EESSSTTTTTTCSEEEECCSSHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCeEEEEECC-HHHHHHHHHcCCcc---ccCCHHHHHhcCCEEEEECCCHHH
Confidence 7899999999999999999999 9988777654 44455566667642 034778899999999999999755
Q ss_pred -HHHH---HHHHhcCCCCcEEEEeCCchhhh---hhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEe
Q 021218 192 -ADNY---EKIFSCMKPNSILGLSHGFLLGH---LQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (316)
Q Consensus 192 -~~vi---~ei~~~mk~gaiLid~aGv~l~~---l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iia 264 (316)
..++ +++.+.++++++|++.+...... +.. .....++.|+. +|...++.. -. .|...+++
T Consensus 78 ~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~--~~~~~g~~~~~-~pv~g~~~~---a~-------~g~l~~~~ 144 (303)
T 3g0o_A 78 VRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAA--ALTALNLNMLD-APVSGGAVK---AA-------QGEMTVMA 144 (303)
T ss_dssp HHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHH--HHHTTTCEEEE-CCEESCHHH---HH-------TTCEEEEE
T ss_pred HHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHH--HHHHcCCeEEe-CCCCCChhh---hh-------cCCeEEEe
Confidence 4566 67889999999999988765322 221 01123677777 884333321 12 23445454
Q ss_pred eccCCCHHHHHHHHHHHHHcCCC
Q 021218 265 VHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 265 p~~d~~~~a~e~a~~l~~alG~~ 287 (316)
.. ++++.+.++.+++.+|.+
T Consensus 145 gg---~~~~~~~~~~ll~~~g~~ 164 (303)
T 3g0o_A 145 SG---SEAAFTRLKPVLDAVASN 164 (303)
T ss_dssp EC---CHHHHHHHHHHHHHHEEE
T ss_pred CC---CHHHHHHHHHHHHHHCCC
Confidence 43 578999999999999954
No 65
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.40 E-value=5.6e-13 Score=123.06 Aligned_cols=152 Identities=17% Similarity=0.109 Sum_probs=105.5
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCch
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~ 190 (316)
|++|+|||+|+||.++|++|.+. |++|.+++++.+ ..+...+.|... ..+++|++++||+|++++|+..
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~------G~~V~~~dr~~~-~~~~~~~~g~~~----~~~~~~~~~~advvi~~v~~~~ 69 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRA------GFDVTVWNRNPA-KCAPLVALGARQ----ASSPAEVCAACDITIAMLADPA 69 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHH------TCCEEEECSSGG-GGHHHHHHTCEE----CSCHHHHHHHCSEEEECCSSHH
T ss_pred CCeEEEEccCHHHHHHHHHHHHC------CCeEEEEcCCHH-HHHHHHHCCCee----cCCHHHHHHcCCEEEEEcCCHH
Confidence 68999999999999999999999 998887766544 444555567663 5689999999999999999874
Q ss_pred -HHHHH---HHHHhcCCCCcEEEEeCCchhhhhhccccCC-CCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEee
Q 021218 191 -QADNY---EKIFSCMKPNSILGLSHGFLLGHLQSMGLDF-PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (316)
Q Consensus 191 -~~~vi---~ei~~~mk~gaiLid~aGv~l~~l~~~~~~~-~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap 265 (316)
..+++ +++.+.++++++|++++.......+.....+ ..++.|+.. |...++. .... |...+++.
T Consensus 70 ~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~-pv~g~~~---~a~~-------g~l~~~~g 138 (287)
T 3pdu_A 70 AAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEA-PVSGTKK---PAED-------GTLIILAA 138 (287)
T ss_dssp HHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEC-CEECCHH---HHHH-------TCEEEEEE
T ss_pred HHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEC-CccCCHH---HHhc-------CCEEEEEe
Confidence 45677 6788999999999998876432211100011 135667664 5322222 1122 33343433
Q ss_pred ccCCCHHHHHHHHHHHHHcCCC
Q 021218 266 HQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 266 ~~d~~~~a~e~a~~l~~alG~~ 287 (316)
. +++..+.++.+++.+|.+
T Consensus 139 g---~~~~~~~~~~ll~~~g~~ 157 (287)
T 3pdu_A 139 G---DQSLFTDAGPAFAALGKK 157 (287)
T ss_dssp E---CHHHHHHTHHHHHHHEEE
T ss_pred C---CHHHHHHHHHHHHHhCCC
Confidence 2 468999999999999954
No 66
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.40 E-value=2.8e-12 Score=117.77 Aligned_cols=159 Identities=14% Similarity=0.114 Sum_probs=106.8
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCC--------CcCCHHhhhc---cC
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG--------TLGDIYETIS---GS 179 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~--------t~~~~~e~i~---~A 179 (316)
||+|+|||.|+||.++|..|.+. |++|.+.+++. +..+...+.|...... ...+..++.+ ++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQG------GNDVTLIDQWP-AHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQV 75 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH-HHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCC
T ss_pred CCeEEEECcCHHHHHHHHHHHhC------CCcEEEEECCH-HHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCC
Confidence 47999999999999999999998 98887776653 3344444556432100 0013334444 89
Q ss_pred CEEEEcccCchHHHHHHHHHhcCCCCcEEEEe-CCchh-hhhhccccCCCCCccEEEeccC------CCchhhHHHHhcC
Q 021218 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLS-HGFLL-GHLQSMGLDFPKNIGVIAVCPK------GMGPSVRRLYVQG 251 (316)
Q Consensus 180 DIViLavp~~~~~~vi~ei~~~mk~gaiLid~-aGv~l-~~l~~~~~~~~~~i~vI~vhPn------~pg~~~r~lf~~G 251 (316)
|+||+++|+....++++++.++++++++|+++ .|+.. ..+.+ .+++. +++..+|. +|+..
T Consensus 76 d~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~---~~~~~-~vi~g~~~~~~~~~~p~~~-------- 143 (316)
T 2ew2_A 76 DLIIALTKAQQLDAMFKAIQPMITEKTYVLCLLNGLGHEDVLEK---YVPKE-NILVGITMWTAGLEGPGRV-------- 143 (316)
T ss_dssp SEEEECSCHHHHHHHHHHHGGGCCTTCEEEECCSSSCTHHHHTT---TSCGG-GEEEEEECCCCEEEETTEE--------
T ss_pred CEEEEEeccccHHHHHHHHHHhcCCCCEEEEecCCCCcHHHHHH---HcCCc-cEEEEEeeeeeEEcCCCEE--------
Confidence 99999999998888999999999999988865 57654 44544 44433 66654431 11111
Q ss_pred ccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCCCee
Q 021218 252 KEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTF 290 (316)
Q Consensus 252 ~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~~~~ 290 (316)
...+.|... +.+....+++..+.+..+++.+|.+...
T Consensus 144 -~~~~~g~~~-i~~~~~~~~~~~~~~~~ll~~~g~~~~~ 180 (316)
T 2ew2_A 144 -KLLGDGEIE-LENIDPSGKKFALEVVDVFQKAGLNPSY 180 (316)
T ss_dssp -EECSCCCEE-EEESSGGGHHHHHHHHHHHHHTTCCEEE
T ss_pred -EEecCCcEE-EeecCCCccHHHHHHHHHHHhCCCCcEE
Confidence 012356666 5555556678899999999999965433
No 67
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=99.40 E-value=3.4e-13 Score=129.23 Aligned_cols=135 Identities=18% Similarity=0.113 Sum_probs=98.9
Q ss_pred ccchhhHHhhcCCccc--cccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCce
Q 021218 86 LADRDEYIVRGGRDLF--NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFT 163 (316)
Q Consensus 86 l~~~~e~vv~~G~w~F--~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~ 163 (316)
+..+++.+ +.|+|.. .....+|.| +++||||+|.||..+|+.++.+ |++|+++++... +...+.++.
T Consensus 116 ~~~~~~~~-~~~~~~~~~~~~~~~l~g-~tvGIiG~G~IG~~va~~~~~f------g~~v~~~d~~~~---~~~~~~~~~ 184 (334)
T 3kb6_A 116 LKRIEDRV-KKLNFSQDSEILARELNR-LTLGVIGTGRIGSRVAMYGLAF------GMKVLCYDVVKR---EDLKEKGCV 184 (334)
T ss_dssp HHHHHHHH-HTTCCCCCGGGCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCC---HHHHHTTCE
T ss_pred cccccccc-cccccccccccccceecC-cEEEEECcchHHHHHHHhhccc------CceeeecCCccc---hhhhhcCce
Confidence 44456664 8888842 223689999 9999999999999999999999 999877665432 233455655
Q ss_pred ecCCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeC-Cch------hhhhhccccCCCCCccEEE
Q 021218 164 EENGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIA 234 (316)
Q Consensus 164 ~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~a-Gv~------l~~l~~~~~~~~~~i~vI~ 234 (316)
..+++|++++||+|++|+|.+..++ +++ +.++.||+|++|+.++ |-. +..+++ +......++|..
T Consensus 185 -----~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~-g~i~gA~LDV~~ 258 (334)
T 3kb6_A 185 -----YTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQR-GKFSGLGLDVFE 258 (334)
T ss_dssp -----ECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHT-TCEEEEEESCCT
T ss_pred -----ecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHh-CCceEEEEeCCC
Confidence 4589999999999999999999887 776 7899999999999664 422 333443 222233456665
Q ss_pred ecc
Q 021218 235 VCP 237 (316)
Q Consensus 235 vhP 237 (316)
.+|
T Consensus 259 ~EP 261 (334)
T 3kb6_A 259 DEE 261 (334)
T ss_dssp THH
T ss_pred CCC
Confidence 666
No 68
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=99.38 E-value=2.7e-13 Score=129.71 Aligned_cols=111 Identities=15% Similarity=0.200 Sum_probs=87.7
Q ss_pred cccchhhHHhhcCCccc--cccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCc
Q 021218 85 SLADRDEYIVRGGRDLF--NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF 162 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~F--~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~ 162 (316)
++..|++.+ |+|+|.+ .+...+|.| ++|||||+|.||.++|+.++.+ |++|+++++..... + +.++
T Consensus 119 ~~~~~~~~~-~~g~w~~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~---~-~~~~ 186 (333)
T 1dxy_A 119 NMGKVQAQL-QAGDYEKAGTFIGKELGQ-QTVGVMGTGHIGQVAIKLFKGF------GAKVIAYDPYPMKG---D-HPDF 186 (333)
T ss_dssp THHHHHHHH-HTTCHHHHTCCCCCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCSS---C-CTTC
T ss_pred hHHHHHHHH-HcCCcccccCCCccCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCcchh---h-Hhcc
Confidence 355677775 9999853 223579999 9999999999999999999999 99988777654332 1 1222
Q ss_pred eecCCCcCCHHhhhccCCEEEEcccCchHHH-HHH-HHHhcCCCCcEEEEeC
Q 021218 163 TEENGTLGDIYETISGSDLVLLLISDAAQAD-NYE-KIFSCMKPNSILGLSH 212 (316)
Q Consensus 163 ~~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~-ei~~~mk~gaiLid~a 212 (316)
. ..++++++++||+|++|+|.+..++ +++ +.++.||+|++|++++
T Consensus 187 ~-----~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~s 233 (333)
T 1dxy_A 187 D-----YVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTA 233 (333)
T ss_dssp E-----ECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECS
T ss_pred c-----cCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECC
Confidence 2 3488999999999999999998765 674 7889999999999875
No 69
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.07 E-value=4.3e-14 Score=125.84 Aligned_cols=152 Identities=14% Similarity=0.070 Sum_probs=104.2
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEccc
Q 021218 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (316)
Q Consensus 108 l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp 187 (316)
+.+ |+|+|||+|+||.++|++|.+. |++|.+.+|... .+.....|+. ..+..++++++|+|++++|
T Consensus 17 ~~~-~~I~iIG~G~mG~~la~~L~~~------G~~V~~~~r~~~--~~~~~~~g~~-----~~~~~~~~~~aDvVilav~ 82 (201)
T 2yjz_A 17 EKQ-GVVCIFGTGDFGKSLGLKMLQC------GYSVVFGSRNPQ--VSSLLPRGAE-----VLCYSEAASRSDVIVLAVH 82 (201)
Confidence 556 8999999999999999999998 888877766533 2223334544 2367788999999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEE-eCCch--------hhhhhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCC
Q 021218 188 DAAQADNYEKIFSCMKPNSILGL-SHGFL--------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAG 258 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~gaiLid-~aGv~--------l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G 258 (316)
++...+++ ++.+ ++++++|++ ..|+. ..+++. .++. -++|++|||++.......-..| .
T Consensus 83 ~~~~~~v~-~l~~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~---~~~~-~~vvra~~n~~a~~~~~g~l~g-----~- 150 (201)
T 2yjz_A 83 REHYDFLA-ELAD-SLKGRVLIDVSNNQKMNQYPESNAEYLAQ---LVPG-AHVVKAFNTISAWALQSGTLDA-----S- 150 (201)
Confidence 98766666 4433 567888775 45664 245544 4443 5899999999887632111111 1
Q ss_pred ceEEEeeccCCCHHHHHHHHHHHHHcCCCC
Q 021218 259 INSSFAVHQDVDGRATNVALGWSVALGSPF 288 (316)
Q Consensus 259 ~~~iiap~~d~~~~a~e~a~~l~~alG~~~ 288 (316)
...+++ .. ++++.+.++.+++.+|.+-
T Consensus 151 ~~~~~~-g~--~~~~~~~v~~ll~~~G~~~ 177 (201)
T 2yjz_A 151 RQVFVC-GN--DSKAKDRVMDIARTLGLTP 177 (201)
Confidence 113233 32 4678899999999999653
No 70
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.34 E-value=2.8e-12 Score=120.15 Aligned_cols=155 Identities=17% Similarity=0.045 Sum_probs=105.5
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEccc
Q 021218 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (316)
Q Consensus 108 l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp 187 (316)
+.. ++|||||+|+||.++|++|.+. |++|++++++ +...+...+.|... ..++.|++++||+||+++|
T Consensus 7 ~~~-~~IgiIG~G~mG~~~A~~l~~~------G~~V~~~dr~-~~~~~~~~~~g~~~----~~~~~e~~~~aDvVi~~vp 74 (306)
T 3l6d_A 7 SFE-FDVSVIGLGAMGTIMAQVLLKQ------GKRVAIWNRS-PGKAAALVAAGAHL----CESVKAALSASPATIFVLL 74 (306)
T ss_dssp CCS-CSEEEECCSHHHHHHHHHHHHT------TCCEEEECSS-HHHHHHHHHHTCEE----CSSHHHHHHHSSEEEECCS
T ss_pred cCC-CeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHCCCee----cCCHHHHHhcCCEEEEEeC
Confidence 445 8999999999999999999999 9988777655 44445555567763 4689999999999999999
Q ss_pred CchH-HHHHH--HHHhcCCCCcEEEEeCCchhh---hhhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceE
Q 021218 188 DAAQ-ADNYE--KIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINS 261 (316)
Q Consensus 188 ~~~~-~~vi~--ei~~~mk~gaiLid~aGv~l~---~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~ 261 (316)
+... .+++. .+ ..+++|++|+|++..... .+.. .....++.|+.. |-.-++.. .+ .+-..
T Consensus 75 ~~~~~~~v~~~~~l-~~~~~g~ivid~st~~~~~~~~l~~--~~~~~g~~~vda-pv~g~~~~-----~~-----~~~~~ 140 (306)
T 3l6d_A 75 DNHATHEVLGMPGV-ARALAHRTIVDYTTNAQDEGLALQG--LVNQAGGHYVKG-MIVAYPRN-----VG-----HRESH 140 (306)
T ss_dssp SHHHHHHHHTSTTH-HHHTTTCEEEECCCCCTTHHHHHHH--HHHHTTCEEEEE-EEESCGGG-----TT-----CTTCE
T ss_pred CHHHHHHHhcccch-hhccCCCEEEECCCCCHHHHHHHHH--HHHHcCCeEEec-ccccCccc-----cc-----CCceE
Confidence 8874 45775 55 346899999998876522 2211 011236777764 52211111 11 22224
Q ss_pred EEeeccCCCHHHHHHHHHHHHHcCCCCeeec
Q 021218 262 SFAVHQDVDGRATNVALGWSVALGSPFTFAT 292 (316)
Q Consensus 262 iiap~~d~~~~a~e~a~~l~~alG~~~~~~t 292 (316)
+++.. ++++.+.++.+++.+|. +++..
T Consensus 141 i~~gg---~~~~~~~~~~ll~~lg~-~~~~~ 167 (306)
T 3l6d_A 141 SIHTG---DREAFEQHRALLEGLAG-HTVFL 167 (306)
T ss_dssp EEEEE---CHHHHHHHHHHHHTTCS-EEEEC
T ss_pred EEEcC---CHHHHHHHHHHHHHhcC-CEEEe
Confidence 34433 47899999999999986 55544
No 71
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.34 E-value=4.5e-12 Score=119.68 Aligned_cols=144 Identities=15% Similarity=0.030 Sum_probs=100.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-cEEEEEecCCc------ccHHHHHHCCceecCCCcC-CHHhhhccCCEEE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGS------RSFAEARAAGFTEENGTLG-DIYETISGSDLVL 183 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G-~~Vivg~r~~~------~s~~~A~~~G~~~~~~t~~-~~~e~i~~ADIVi 183 (316)
++|||||+|.||.++|++|.+. | ++|++++++.. ...+...+.|+ .. ++.|++++||+||
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~------G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~------~~~s~~e~~~~aDvVi 92 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR------NAARLAAYDLRFNDPAASGALRARAAELGV------EPLDDVAGIACADVVL 92 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT------TCSEEEEECGGGGCTTTHHHHHHHHHHTTC------EEESSGGGGGGCSEEE
T ss_pred CeEEEECccHHHHHHHHHHHHc------CCCeEEEEeCCCccccchHHHHHHHHHCCC------CCCCHHHHHhcCCEEE
Confidence 7999999999999999999999 9 88887776541 23344455665 23 6778999999999
Q ss_pred EcccCchHHHHHHHHHhcCCCCcEEEEeCCchhh---hhhccccCCCCCccEEEecc-CCCchhhHHHHhcCccccCCCc
Q 021218 184 LLISDAAQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCP-KGMGPSVRRLYVQGKEINGAGI 259 (316)
Q Consensus 184 Lavp~~~~~~vi~ei~~~mk~gaiLid~aGv~l~---~l~~~~~~~~~~i~vI~vhP-n~pg~~~r~lf~~G~e~~G~G~ 259 (316)
+++|++...+.++++.+.++++++|++.+++... .+.. .....++.|+. +| .+|... ..| .
T Consensus 93 ~avp~~~~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~--~l~~~g~~~~d-~pv~g~~~a-----~~g-------~ 157 (317)
T 4ezb_A 93 SLVVGAATKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAG--AIATGKGSFVE-GAVMARVPP-----YAE-------K 157 (317)
T ss_dssp ECCCGGGHHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHH--HHHTSSCEEEE-EEECSCSTT-----TGG-------G
T ss_pred EecCCHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHH--HHHHcCCeEEe-ccCCCCchh-----hcC-------C
Confidence 9999999999889999999999999998876522 2221 01122455654 24 111111 012 2
Q ss_pred eEEEeeccCCCHHHHHHHHHHHHHcCCC
Q 021218 260 NSSFAVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 260 ~~iiap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
..+++..++. +.++.+++.+|.+
T Consensus 158 l~i~vgg~~~-----~~~~~ll~~~g~~ 180 (317)
T 4ezb_A 158 VPILVAGRRA-----VEVAERLNALGMN 180 (317)
T ss_dssp SEEEEESTTH-----HHHHHHHHTTTCE
T ss_pred EEEEEeCChH-----HHHHHHHHHhCCC
Confidence 3445554332 7788999999853
No 72
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.33 E-value=6.8e-12 Score=116.87 Aligned_cols=149 Identities=16% Similarity=0.158 Sum_probs=105.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCchH
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~~ 191 (316)
++|+|||+|.||.++|++|.+. |++|.+++++.+ ..+...+.|+.. ..+++|+++ ||+|++++|+...
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~-~~~~~~~~g~~~----~~~~~~~~~-aDvvi~~vp~~~~ 83 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW------PGGVTVYDIRIE-AMTPLAEAGATL----ADSVADVAA-ADLIHITVLDDAQ 83 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS------TTCEEEECSSTT-TSHHHHHTTCEE----CSSHHHHTT-SSEEEECCSSHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHC------CCeEEEEeCCHH-HHHHHHHCCCEE----cCCHHHHHh-CCEEEEECCChHH
Confidence 6899999999999999999998 998887776644 445566678764 568999999 9999999997654
Q ss_pred -HHHHHHHHhcCCCCcEEEEeCCchhhh---hhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEeecc
Q 021218 192 -ADNYEKIFSCMKPNSILGLSHGFLLGH---LQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (316)
Q Consensus 192 -~~vi~ei~~~mk~gaiLid~aGv~l~~---l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~ 267 (316)
.++++++.+.++++++|++.+...... +.. .....++.|+. +|-..++. ....| ...+++..
T Consensus 84 ~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~--~~~~~g~~~~~-~pv~g~~~---~a~~g-------~l~~~~gg- 149 (296)
T 3qha_A 84 VREVVGELAGHAKPGTVIAIHSTISDTTAVELAR--DLKARDIHIVD-APVSGGAA---AAARG-------ELATMVGA- 149 (296)
T ss_dssp HHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHH--HHGGGTCEEEE-CCEESCHH---HHHHT-------CEEEEEEC-
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHH--HHHHcCCEEEe-CCCcCCHH---HHhcC-------CccEEecC-
Confidence 568899999999999999988764322 221 01123566665 46322222 11222 33433333
Q ss_pred CCCHHHHHHHHHHHHHcCCCC
Q 021218 268 DVDGRATNVALGWSVALGSPF 288 (316)
Q Consensus 268 d~~~~a~e~a~~l~~alG~~~ 288 (316)
++++.+.++.+++.+|.+-
T Consensus 150 --~~~~~~~~~~ll~~~g~~~ 168 (296)
T 3qha_A 150 --DREVYERIKPAFKHWAAVV 168 (296)
T ss_dssp --CHHHHHHHHHHHHHHEEEE
T ss_pred --CHHHHHHHHHHHHHHcCCe
Confidence 4689999999999999643
No 73
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.33 E-value=8.6e-12 Score=116.22 Aligned_cols=157 Identities=13% Similarity=0.090 Sum_probs=103.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC-CcccHHHHHHCCceecC-------CCcC--CHHhhhccCCE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGFTEEN-------GTLG--DIYETISGSDL 181 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~-~~~s~~~A~~~G~~~~~-------~t~~--~~~e~i~~ADI 181 (316)
|+|+|||.|+||.++|..|.+. |++|.+.++. +++..+...+.|..... .... +..++++++|+
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~ 74 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN------GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEV 74 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH------CCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSE
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCE
Confidence 5899999999999999999998 9988877761 23334444444431000 0123 56678899999
Q ss_pred EEEcccCchHHHHHHHHHhcCCCCcEEEEeC-Cc------hhhhhhcc-ccCCCC-CccEEEeccCCCchhhHHHHhcCc
Q 021218 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSH-GF------LLGHLQSM-GLDFPK-NIGVIAVCPKGMGPSVRRLYVQGK 252 (316)
Q Consensus 182 ViLavp~~~~~~vi~ei~~~mk~gaiLid~a-Gv------~l~~l~~~-~~~~~~-~i~vI~vhPn~pg~~~r~lf~~G~ 252 (316)
||+++|+....++++++.+ ++++++|+++. |+ ....+.+. ...++. ..-.++.+|+.+... +
T Consensus 75 vi~~v~~~~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~-------~- 145 (335)
T 1txg_A 75 VLLGVSTDGVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIAREV-------A- 145 (335)
T ss_dssp EEECSCGGGHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCHHHH-------H-
T ss_pred EEEcCChHHHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCcHHHH-------H-
Confidence 9999999988889999999 99999988765 87 22233220 001121 112567788663322 1
Q ss_pred cccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCCC
Q 021218 253 EINGAGINSSFAVHQDVDGRATNVALGWSVALGSPF 288 (316)
Q Consensus 253 e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~~ 288 (316)
.|.+..+++.. .+++..+.+..+++..|.+-
T Consensus 146 ----~g~~~~~~~~~-~~~~~~~~~~~ll~~~g~~~ 176 (335)
T 1txg_A 146 ----KRMPTTVVFSS-PSESSANKMKEIFETEYFGV 176 (335)
T ss_dssp ----TTCCEEEEEEC-SCHHHHHHHHHHHCBTTEEE
T ss_pred ----ccCCcEEEEEe-CCHHHHHHHHHHhCCCcEEE
Confidence 23433344443 35788889999999888653
No 74
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.32 E-value=1.8e-11 Score=118.26 Aligned_cols=150 Identities=17% Similarity=0.129 Sum_probs=107.2
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccC---CEEEE
Q 021218 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGS---DLVLL 184 (316)
Q Consensus 108 l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~A---DIViL 184 (316)
+++ |+|||||+|.||.++|++|.+. |++|.+++++ +...+...+.|+.. ..+++|+++++ |+|++
T Consensus 20 m~~-mkIgiIGlG~mG~~~A~~L~~~------G~~V~v~dr~-~~~~~~l~~~g~~~----~~s~~e~~~~a~~~DvVi~ 87 (358)
T 4e21_A 20 FQS-MQIGMIGLGRMGADMVRRLRKG------GHECVVYDLN-VNAVQALEREGIAG----ARSIEEFCAKLVKPRVVWL 87 (358)
T ss_dssp --C-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHTTTCBC----CSSHHHHHHHSCSSCEEEE
T ss_pred hcC-CEEEEECchHHHHHHHHHHHhC------CCEEEEEeCC-HHHHHHHHHCCCEE----eCCHHHHHhcCCCCCEEEE
Confidence 346 8999999999999999999999 9988777655 44455666667763 46889999999 99999
Q ss_pred cccCchHHHHHHHHHhcCCCCcEEEEeCCchhh---hhhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceE
Q 021218 185 LISDAAQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINS 261 (316)
Q Consensus 185 avp~~~~~~vi~ei~~~mk~gaiLid~aGv~l~---~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~ 261 (316)
++|+....++++++.+.+++|++|+|.+..... .+.. .....++.|+.. |-.-+.. .-+.| . .
T Consensus 88 ~vp~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~--~l~~~g~~~vda-pVsGg~~---~a~~G-------~-~ 153 (358)
T 4e21_A 88 MVPAAVVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRAD--QMRAQGITYVDV-GTSGGIF---GLERG-------Y-C 153 (358)
T ss_dssp CSCGGGHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHH--HHHTTTCEEEEE-EEECGGG---HHHHC-------C-E
T ss_pred eCCHHHHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHH--HHHHCCCEEEeC-CCCCCHH---HHhcC-------C-e
Confidence 999996667999999999999999998776421 1211 011346777753 5211111 11222 3 3
Q ss_pred EEeeccCCCHHHHHHHHHHHHHcCC
Q 021218 262 SFAVHQDVDGRATNVALGWSVALGS 286 (316)
Q Consensus 262 iiap~~d~~~~a~e~a~~l~~alG~ 286 (316)
|.+.. ++++.+.++.+++.+|.
T Consensus 154 -im~GG--~~~a~~~~~~ll~~lg~ 175 (358)
T 4e21_A 154 -LMIGG--EKQAVERLDPVFRTLAP 175 (358)
T ss_dssp -EEEES--CHHHHHHTHHHHHHHSC
T ss_pred -eeecC--CHHHHHHHHHHHHHhcc
Confidence 44443 46899999999999994
No 75
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.32 E-value=1.2e-11 Score=116.47 Aligned_cols=149 Identities=19% Similarity=0.111 Sum_probs=104.0
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEccc
Q 021218 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (316)
Q Consensus 108 l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp 187 (316)
.+. ++|||||+|.||.++|++|.+. |++|.+++++ ++..+...+.|+.. ..+++|++++||+|++++|
T Consensus 29 ~~~-~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~-~~~~~~l~~~g~~~----~~~~~e~~~~aDvVi~~vp 96 (320)
T 4dll_A 29 PYA-RKITFLGTGSMGLPMARRLCEA------GYALQVWNRT-PARAASLAALGATI----HEQARAAARDADIVVSMLE 96 (320)
T ss_dssp CCC-SEEEEECCTTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHTTTCEE----ESSHHHHHTTCSEEEECCS
T ss_pred cCC-CEEEEECccHHHHHHHHHHHhC------CCeEEEEcCC-HHHHHHHHHCCCEe----eCCHHHHHhcCCEEEEECC
Confidence 344 8999999999999999999999 9988777654 44455555667763 4689999999999999999
Q ss_pred CchH-HHHHH--HHHhcCCCCcEEEEeCCchhhh---hhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceE
Q 021218 188 DAAQ-ADNYE--KIFSCMKPNSILGLSHGFLLGH---LQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINS 261 (316)
Q Consensus 188 ~~~~-~~vi~--ei~~~mk~gaiLid~aGv~l~~---l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~ 261 (316)
+... .+++. ++.+.++++++|++++...... +.. .....++.|+. +|-..+.. .-..| ...
T Consensus 97 ~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~--~~~~~g~~~~~-~pv~g~~~---~a~~g-------~l~ 163 (320)
T 4dll_A 97 NGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAA--RLGALGIAHLD-TPVSGGTV---GAEQG-------TLV 163 (320)
T ss_dssp SHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEEE-CCEECHHH---HHHHT-------CEE
T ss_pred CHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHH--HHHHcCCEEEe-CCCcCCHh---HHhcC-------Cee
Confidence 7654 45776 7888999999999988764322 211 01123566765 36322221 11222 334
Q ss_pred EEeeccCCCHHHHHHHHHHHHHc
Q 021218 262 SFAVHQDVDGRATNVALGWSVAL 284 (316)
Q Consensus 262 iiap~~d~~~~a~e~a~~l~~al 284 (316)
+++.. ++++.+.++.+++.+
T Consensus 164 i~~gg---~~~~~~~~~~ll~~~ 183 (320)
T 4dll_A 164 IMAGG---KPADFERSLPLLKVF 183 (320)
T ss_dssp EEEES---CHHHHHHHHHHHHHH
T ss_pred EEeCC---CHHHHHHHHHHHHhc
Confidence 33332 568999999999999
No 76
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.31 E-value=2.9e-12 Score=117.85 Aligned_cols=152 Identities=16% Similarity=0.093 Sum_probs=100.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCchH
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~~ 191 (316)
|+|+|||+|.||.++|++|.+. |++|.+.+++. +..+...+.|+.. ..+.+++++++|+|++++|....
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~------g~~V~~~~~~~-~~~~~~~~~g~~~----~~~~~~~~~~~Dvvi~~vp~~~~ 69 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH------GYPLIIYDVFP-DACKEFQDAGEQV----VSSPADVAEKADRIITMLPTSIN 69 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT------TCCEEEECSST-HHHHHHHTTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred CeEEEEeccHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHcCCee----cCCHHHHHhcCCEEEEeCCCHHH
Confidence 5799999999999999999998 88887766653 4445555567653 45788999999999999976654
Q ss_pred -HHHHHH---HHhcCCCCcEEEEeCCchhhhhhccccCCC-CCccEEEeccCCCchhhHHHHhcCccccCCCceEEEeec
Q 021218 192 -ADNYEK---IFSCMKPNSILGLSHGFLLGHLQSMGLDFP-KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (316)
Q Consensus 192 -~~vi~e---i~~~mk~gaiLid~aGv~l~~l~~~~~~~~-~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~ 266 (316)
..++.+ +.+.++++++|++.+|+.....+.....++ .+..+ |+.|...-...... |... +.+.
T Consensus 70 ~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~~----~~~p~~~g~~~a~~-------~~~~-~~~~ 137 (296)
T 2gf2_A 70 AIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVF----MDAPVSGGVGAARS-------GNLT-FMVG 137 (296)
T ss_dssp HHHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEE----EECCEESHHHHHHH-------TCEE-EEEE
T ss_pred HHHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEE----EEcCCCCChhHHhc-------CcEE-EEeC
Confidence 557765 456789999999988876543321000111 12223 33333221112222 3334 3333
Q ss_pred cCCCHHHHHHHHHHHHHcCCCC
Q 021218 267 QDVDGRATNVALGWSVALGSPF 288 (316)
Q Consensus 267 ~d~~~~a~e~a~~l~~alG~~~ 288 (316)
.+++..+.++.+++.+|...
T Consensus 138 --~~~~~~~~v~~l~~~~g~~~ 157 (296)
T 2gf2_A 138 --GVEDEFAAAQELLGCMGSNV 157 (296)
T ss_dssp --SCGGGHHHHHHHHTTTEEEE
T ss_pred --CCHHHHHHHHHHHHHHcCCe
Confidence 35688899999999999643
No 77
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.30 E-value=3.9e-12 Score=121.05 Aligned_cols=146 Identities=16% Similarity=0.120 Sum_probs=100.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCC--------------ceecCCCcCCHHhhhc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG--------------FTEENGTLGDIYETIS 177 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G--------------~~~~~~t~~~~~e~i~ 177 (316)
++|+|||.|+||.++|.+|.+. |++|.+.+++. ...+...+.+ +. ...+..++++
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~------G~~V~~~~r~~-~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 84 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKK------CREVCVWHMNE-EEVRLVNEKRENVLFLKGVQLASNIT----FTSDVEKAYN 84 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTT------EEEEEEECSCH-HHHHHHHHHTBCTTTSTTCBCCTTEE----EESCHHHHHT
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCEEEEEECCH-HHHHHHHHcCccccccccccccccee----eeCCHHHHHc
Confidence 3899999999999999999988 88887776653 3333333322 12 1347788899
Q ss_pred cCCEEEEcccCchHHHHHHH----HHhcCCC-CcEEEEeC-Cchhh-------hhhccccCCCCCccEEEeccCCCchhh
Q 021218 178 GSDLVLLLISDAAQADNYEK----IFSCMKP-NSILGLSH-GFLLG-------HLQSMGLDFPKNIGVIAVCPKGMGPSV 244 (316)
Q Consensus 178 ~ADIViLavp~~~~~~vi~e----i~~~mk~-gaiLid~a-Gv~l~-------~l~~~~~~~~~~i~vI~vhPn~pg~~~ 244 (316)
++|+||+++|++...+++.+ +.+++++ +++|+++. |+... .+.. .++.....++.+|+.+...
T Consensus 85 ~aDvVilav~~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~---~~~~~~~~v~~gp~~~~~~- 160 (366)
T 1evy_A 85 GAEIILFVIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGE---FLPSPLLSVLAGPSFAIEV- 160 (366)
T ss_dssp TCSSEEECCCHHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTT---TSCGGGEEEEESSCCHHHH-
T ss_pred CCCEEEECCChHHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHH---HCCCCcEEEEeCCChHHHH-
Confidence 99999999999888889988 9888988 88888765 76532 1221 2232223577888765432
Q ss_pred HHHHhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHc
Q 021218 245 RRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVAL 284 (316)
Q Consensus 245 r~lf~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~al 284 (316)
+ .|....+... ..+++..+.+..++...
T Consensus 161 ---~--------~g~~~~~~~~-~~~~~~~~~v~~ll~~~ 188 (366)
T 1evy_A 161 ---A--------TGVFTCVSIA-SADINVARRLQRIMSTG 188 (366)
T ss_dssp ---H--------TTCCEEEEEE-CSSHHHHHHHHHHHSCT
T ss_pred ---H--------hCCceEEEEe-cCCHHHHHHHHHHhcCC
Confidence 1 2344433433 34568888899999988
No 78
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.30 E-value=8.5e-12 Score=124.70 Aligned_cols=148 Identities=13% Similarity=0.127 Sum_probs=104.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC---CceecCCCcCCHHhhhcc---CCEEEEc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---GFTEENGTLGDIYETISG---SDLVLLL 185 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~---G~~~~~~t~~~~~e~i~~---ADIViLa 185 (316)
++|||||+|+||.++|++|.+. |++|.+++|+.++..+...+. |+.. ..+++|++++ +|+||++
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~------G~~V~v~~r~~~~~~~l~~~~~~~gi~~----~~s~~e~v~~l~~aDvVil~ 85 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESR------GYTVSIFNRSREKTEEVIAENPGKKLVP----YYTVKEFVESLETPRRILLM 85 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTT------TCCEEEECSSHHHHHHHHHHSTTSCEEE----CSSHHHHHHTBCSSCEEEEC
T ss_pred CeEEEEccHHHHHHHHHHHHhC------CCeEEEEeCCHHHHHHHHhhCCCCCeEE----eCCHHHHHhCCCCCCEEEEE
Confidence 8899999999999999999998 999887777644333333332 6653 4578888877 9999999
Q ss_pred ccCc-hHHHHHHHHHhcCCCCcEEEEeCCch---hhhhhccccCC-CCCccEEEeccCCCchhhHHHHhcCccccCCCce
Q 021218 186 ISDA-AQADNYEKIFSCMKPNSILGLSHGFL---LGHLQSMGLDF-PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGIN 260 (316)
Q Consensus 186 vp~~-~~~~vi~ei~~~mk~gaiLid~aGv~---l~~l~~~~~~~-~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~ 260 (316)
+|+. ...++++++.+.+++|++|++++... ...+.+ .+ ..++.++ .+|...++.. ... |.
T Consensus 86 Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~---~l~~~g~~~v-~~pv~gg~~~---a~~-------g~- 150 (480)
T 2zyd_A 86 VKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNR---ELSAEGFNFI-GTGVSGGEEG---ALK-------GP- 150 (480)
T ss_dssp SCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH---HHHHTTCEEE-EEEEESHHHH---HHH-------CC-
T ss_pred CCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHH---HHHHCCCCee-CCccccCHhH---Hhc-------CC-
Confidence 9995 56779999999999999999876432 122222 11 1356777 4575433331 222 34
Q ss_pred EEEeeccCCCHHHHHHHHHHHHHcCCC
Q 021218 261 SSFAVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 261 ~iiap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
. +.+.. ++++.+.++.+++.+|.+
T Consensus 151 ~-i~~gg--~~~~~~~v~~ll~~~g~~ 174 (480)
T 2zyd_A 151 S-IMPGG--QKEAYELVAPILTKIAAV 174 (480)
T ss_dssp E-EEEES--CHHHHHHHHHHHHHHSCB
T ss_pred e-EEecC--CHHHHHHHHHHHHHHhcc
Confidence 3 34443 478999999999999975
No 79
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.29 E-value=1.5e-11 Score=109.36 Aligned_cols=147 Identities=18% Similarity=0.133 Sum_probs=96.7
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEE
Q 021218 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (316)
Q Consensus 105 ~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViL 184 (316)
..++.+ ++|+|||.|+||.++|+.|.+. |++|.+.+++.+ .+++||+|++
T Consensus 14 ~~~~~~-~~I~iiG~G~mG~~la~~l~~~------g~~V~~~~~~~~-----------------------~~~~aD~vi~ 63 (209)
T 2raf_A 14 NLYFQG-MEITIFGKGNMGQAIGHNFEIA------GHEVTYYGSKDQ-----------------------ATTLGEIVIM 63 (209)
T ss_dssp -------CEEEEECCSHHHHHHHHHHHHT------TCEEEEECTTCC-----------------------CSSCCSEEEE
T ss_pred ccccCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCHH-----------------------HhccCCEEEE
Confidence 356778 9999999999999999999998 988877655421 3578999999
Q ss_pred cccCchHHHHHHHHHhcCCCCcEEEEe-CCch---------------hhhhhccccCCCCCccEEE-eccCCCchhhHHH
Q 021218 185 LISDAAQADNYEKIFSCMKPNSILGLS-HGFL---------------LGHLQSMGLDFPKNIGVIA-VCPKGMGPSVRRL 247 (316)
Q Consensus 185 avp~~~~~~vi~ei~~~mk~gaiLid~-aGv~---------------l~~l~~~~~~~~~~i~vI~-vhPn~pg~~~r~l 247 (316)
++|++...++++++.+.++ +++|+++ .|+. ...+++ .+| +.+|++ .+| ..++.....
T Consensus 64 av~~~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~---~l~-~~~vv~~~~~-~~~p~~~~~ 137 (209)
T 2raf_A 64 AVPYPALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQ---QLP-DSQVLKAFNT-TFAATLQSG 137 (209)
T ss_dssp CSCHHHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHH---HCT-TSEEEECSTT-SCHHHHHHS
T ss_pred cCCcHHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHH---HCC-CCcEEEeeec-ccHhhcccc
Confidence 9998888889998888888 8888865 4554 234444 444 468888 555 223332111
Q ss_pred HhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCCCeeecCh
Q 021218 248 YVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTL 294 (316)
Q Consensus 248 f~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~~~~~tT~ 294 (316)
-. .|.+...++... .++++.+.++++++.+|++-+.....
T Consensus 138 ~~-----~g~~~~~~~~~g--~~~~~~~~v~~ll~~~G~~~~~~~~i 177 (209)
T 2raf_A 138 QV-----NGKEPTTVLVAG--NDDSAKQRFTRALADSPLEVKDAGKL 177 (209)
T ss_dssp EE-----TTTEECEEEEEE--SCHHHHHHHHHHTTTSSCEEEEEESG
T ss_pred cc-----CCCCCceeEEcC--CCHHHHHHHHHHHHHcCCceEeCCCH
Confidence 11 111222322322 35689999999999999754444443
No 80
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.28 E-value=1.7e-11 Score=117.51 Aligned_cols=150 Identities=10% Similarity=-0.004 Sum_probs=102.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCC-------cEEEEEecCCcc----cHHHHHHC--------------Cceec
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSD-------IVVKVGLRKGSR----SFAEARAA--------------GFTEE 165 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G-------~~Vivg~r~~~~----s~~~A~~~--------------G~~~~ 165 (316)
|++|+|||.|+||.++|..|.+. | ++|.++++..+. ..+...+. ++.
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~------G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~-- 92 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTN------AKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIV-- 92 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHH------HHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEE--
T ss_pred CCEEEEECcCHHHHHHHHHHHHc------CCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeE--
Confidence 47899999999999999999988 7 788877776430 22222221 122
Q ss_pred CCCcCCHHhhhccCCEEEEcccCchHHHHHHHHHh----cCCCCcEEEEeC-Cchh---------hhhhccccCCCCCcc
Q 021218 166 NGTLGDIYETISGSDLVLLLISDAAQADNYEKIFS----CMKPNSILGLSH-GFLL---------GHLQSMGLDFPKNIG 231 (316)
Q Consensus 166 ~~t~~~~~e~i~~ADIViLavp~~~~~~vi~ei~~----~mk~gaiLid~a-Gv~l---------~~l~~~~~~~~~~i~ 231 (316)
...+..++++++|+||+++|++...++++++.+ .++++++|+++. |+.. ..+.. .++.+ -
T Consensus 93 --~~~~~~ea~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~---~~~~~-~ 166 (375)
T 1yj8_A 93 --AHSDLASVINDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISD---FLNIP-C 166 (375)
T ss_dssp --EESSTHHHHTTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHH---HSSSC-E
T ss_pred --EECCHHHHHcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHH---HcCCC-E
Confidence 134677889999999999999888889999998 899999888665 6543 11222 22312 3
Q ss_pred EEEeccCCCchhhHHHHhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCC
Q 021218 232 VIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 232 vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
.++.+|+.+... + .|....++.. ..+++..+.+..+++..|++
T Consensus 167 ~v~~gp~~a~~v-------~-----~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~ 209 (375)
T 1yj8_A 167 SALSGANIAMDV-------A-----MENFSEATIG-GNDKDSLVIWQRVFDLPYFK 209 (375)
T ss_dssp EEEECSCCHHHH-------H-----TTCCEEEEEE-CSCHHHHHHHHHHHCBTTEE
T ss_pred EEEeCCchHHHH-------H-----hCCCeEEEEe-cCCHHHHHHHHHHhCCCCeE
Confidence 567888775432 1 2344433433 34567888888999888854
No 81
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.27 E-value=4.2e-11 Score=125.04 Aligned_cols=154 Identities=10% Similarity=0.060 Sum_probs=112.2
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHH-----------HHCCceec---------CCCcC
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA-----------RAAGFTEE---------NGTLG 170 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A-----------~~~G~~~~---------~~t~~ 170 (316)
+++|+|||.|.||.++|..+... |++|++.+++.+ ..+.+ .+.|.... -....
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a------G~~V~l~D~~~~-~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~ 386 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK------GTPILMKDINEH-GIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTL 386 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT------TCCEEEECSSHH-HHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEES
T ss_pred CCEEEEECCChhhHHHHHHHHhC------CCEEEEEECCHH-HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEEC
Confidence 48999999999999999999999 999887766533 23222 22342100 00123
Q ss_pred CHHhhhccCCEEEEcccCchHH--HHHHHHHhcCCCCcEEE-EeCCchhhhhhccccCCCCCccEEEeccCCCchhhHHH
Q 021218 171 DIYETISGSDLVLLLISDAAQA--DNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRL 247 (316)
Q Consensus 171 ~~~e~i~~ADIViLavp~~~~~--~vi~ei~~~mk~gaiLi-d~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~l 247 (316)
+. +.+++||+||+++|.+... +++.++.++++++++|+ .++++.+..+.. .....-+|++.||..|...
T Consensus 387 d~-~~~~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~---~~~~~~~~ig~hf~~P~~~---- 458 (715)
T 1wdk_A 387 SY-GDFGNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAK---ALKRPENFVGMHFFNPVHM---- 458 (715)
T ss_dssp SS-TTGGGCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHGG---GCSCGGGEEEEECCSSTTT----
T ss_pred CH-HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHHHHH---HhcCccceEEEEccCCccc----
Confidence 45 6789999999999988753 47889999999999887 567777666654 2233347999999776654
Q ss_pred HhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCCCe
Q 021218 248 YVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT 289 (316)
Q Consensus 248 f~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~~~ 289 (316)
+ ....+++...++++.++.+..+++.+|..-+
T Consensus 459 ---~-------~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v 490 (715)
T 1wdk_A 459 ---M-------PLVEVIRGEKSSDLAVATTVAYAKKMGKNPI 490 (715)
T ss_dssp ---C-------CEEEEEECSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred ---C-------ceEEEEECCCCCHHHHHHHHHHHHHhCCEeE
Confidence 1 3455788888999999999999999996433
No 82
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.27 E-value=3.1e-11 Score=113.80 Aligned_cols=149 Identities=8% Similarity=0.005 Sum_probs=103.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-------cEEEEEecCCcc----cHHHHHHCC--------------ceecC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-------IVVKVGLRKGSR----SFAEARAAG--------------FTEEN 166 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G-------~~Vivg~r~~~~----s~~~A~~~G--------------~~~~~ 166 (316)
|+|+|||.|+||.++|..|.+. | ++|.+.+++... ..+...+.+ +.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~------g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--- 79 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN------AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVV--- 79 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH------HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEE---
T ss_pred CeEEEECCCHHHHHHHHHHHhc------CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeE---
Confidence 7999999999999999999988 7 788777766440 233322211 11
Q ss_pred CCcCCHHhhhccCCEEEEcccCchHHHHHHHHHhcCCCCcEEEEe-CCchh---------hhhhccccCCCCCccEEEec
Q 021218 167 GTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS-HGFLL---------GHLQSMGLDFPKNIGVIAVC 236 (316)
Q Consensus 167 ~t~~~~~e~i~~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~-aGv~l---------~~l~~~~~~~~~~i~vI~vh 236 (316)
...+.+++++++|+||+++|++...++++++.++++++++|+++ .|+.. ..+.. .++ ....++.+
T Consensus 80 -~~~~~~~~~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~---~~~-~~~~v~~g 154 (354)
T 1x0v_A 80 -AVPDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGE---RLG-IPMSVLMG 154 (354)
T ss_dssp -EESSHHHHHTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHH---HHT-CCEEEEEC
T ss_pred -EEcCHHHHHcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHH---HcC-CCEEEEEC
Confidence 13467788999999999999988888999999999999988765 46642 11222 223 12457888
Q ss_pred cCCCchhhHHHHhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCC
Q 021218 237 PKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 237 Pn~pg~~~r~lf~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
|+.+... + .|.+..++.. ..+++..+.+..++...|.+
T Consensus 155 p~~a~~v----~--------~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~ 192 (354)
T 1x0v_A 155 ANIASEV----A--------DEKFCETTIG-CKDPAQGQLLKELMQTPNFR 192 (354)
T ss_dssp SCCHHHH----H--------TTCCEEEEEE-CSSHHHHHHHHHHHCBTTEE
T ss_pred CCcHHHH----H--------hcCCceEEEE-ECCHHHHHHHHHHhCCCCEE
Confidence 9875432 1 2344434443 34567888889999988864
No 83
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.26 E-value=1.3e-11 Score=113.54 Aligned_cols=148 Identities=17% Similarity=0.248 Sum_probs=101.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCch-
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA- 190 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~- 190 (316)
|+|+|||+|.||.++++.|.+. |++|.+.+++ ++..+...+.|+.. ..+.+++++++|+|++++|...
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~-~~~~~~~~~~g~~~----~~~~~~~~~~~D~vi~~v~~~~~ 74 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA------GYSLVVSDRN-PEAIADVIAAGAET----ASTAKAIAEQCDVIITMLPNSPH 74 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred ceEEEECchHHHHHHHHHHHhC------CCEEEEEeCC-HHHHHHHHHCCCee----cCCHHHHHhCCCEEEEECCCHHH
Confidence 6899999999999999999998 8887666554 44445555667663 4578889999999999999655
Q ss_pred HHHHH---HHHHhcCCCCcEEEEeCCch---hhhhhccccCC-CCCccEEEeccCCCchhhHHHHhcCccccCCCceEEE
Q 021218 191 QADNY---EKIFSCMKPNSILGLSHGFL---LGHLQSMGLDF-PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (316)
Q Consensus 191 ~~~vi---~ei~~~mk~gaiLid~aGv~---l~~l~~~~~~~-~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~ii 263 (316)
...++ +++.+.++++++|++++... ...+.+ .+ ..++.++.. |-.+++. ....| +. .++
T Consensus 75 ~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~---~~~~~g~~~~~~-pv~~~~~---~~~~~------~~-~~~ 140 (299)
T 1vpd_A 75 VKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISD---ALKAKGVEMLDA-PVSGGEP---KAIDG------TL-SVM 140 (299)
T ss_dssp HHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHH---HHHTTTCEEEEC-CEESHHH---HHHHT------CE-EEE
T ss_pred HHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHH---HHHHcCCeEEEe-cCCCCHh---HHhcC------CE-EEE
Confidence 45577 57888899999998775443 223332 22 235667654 5332222 11122 23 334
Q ss_pred eeccCCCHHHHHHHHHHHHHcCCC
Q 021218 264 AVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 264 ap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
+.. +++..+.++.+++.+|.+
T Consensus 141 ~~~---~~~~~~~~~~ll~~~g~~ 161 (299)
T 1vpd_A 141 VGG---DKAIFDKYYDLMKAMAGS 161 (299)
T ss_dssp EES---CHHHHHHHHHHHHTTEEE
T ss_pred eCC---CHHHHHHHHHHHHHHcCC
Confidence 432 578899999999999964
No 84
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.25 E-value=2.2e-11 Score=111.65 Aligned_cols=148 Identities=14% Similarity=0.103 Sum_probs=100.9
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCch
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~ 190 (316)
||+|+|||+|.||.++|+.|.+. |++|.+.+ + ++..+...+.|+.. ..+.+++++++|+|++++|...
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~-~-~~~~~~~~~~g~~~----~~~~~~~~~~~D~vi~~vp~~~ 70 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARA------GHQLHVTT-I-GPVADELLSLGAVN----VETARQVTEFADIIFIMVPDTP 70 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHT------TCEEEECC-S-SCCCHHHHTTTCBC----CSSHHHHHHTCSEEEECCSSHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhC------CCEEEEEc-C-HHHHHHHHHcCCcc----cCCHHHHHhcCCEEEEECCCHH
Confidence 47999999999999999999998 88887665 4 33344445557653 4578899999999999998887
Q ss_pred H-HHHHH---HHHhcCCCCcEEEEeCCch---hhhhhccccCCC-CCccEEEeccCCCchhhHHHHhcCccccCCCceEE
Q 021218 191 Q-ADNYE---KIFSCMKPNSILGLSHGFL---LGHLQSMGLDFP-KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSS 262 (316)
Q Consensus 191 ~-~~vi~---ei~~~mk~gaiLid~aGv~---l~~l~~~~~~~~-~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~i 262 (316)
+ ..++. ++.+.++++++|++.+... ...+.. .++ .++.++. .|...++ ..... |...+
T Consensus 71 ~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~---~~~~~g~~~~~-~p~~~~~---~~a~~-------g~~~~ 136 (295)
T 1yb4_A 71 QVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQ---RVNEMGADYLD-APVSGGE---IGARE-------GTLSI 136 (295)
T ss_dssp HHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHH---HHHTTTEEEEE-CCEESHH---HHHHH-------TCEEE
T ss_pred HHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHH---HHHHcCCeEEE-ccCCCCH---HHHHc-------CCeEE
Confidence 5 45776 7788899999988776543 223332 122 2455553 3532222 12222 34444
Q ss_pred EeeccCCCHHHHHHHHHHHHHcCCC
Q 021218 263 FAVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 263 iap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
++.. +++..+.++.+++.+|.+
T Consensus 137 ~~~~---~~~~~~~~~~ll~~~g~~ 158 (295)
T 1yb4_A 137 MVGG---EQKVFDRVKPLFDILGKN 158 (295)
T ss_dssp EEES---CHHHHHHHHHHHHHHEEE
T ss_pred EECC---CHHHHHHHHHHHHHhcCC
Confidence 4443 678899999999999964
No 85
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.24 E-value=4.6e-12 Score=118.97 Aligned_cols=149 Identities=13% Similarity=0.127 Sum_probs=98.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCchH
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~~ 191 (316)
+||||||+|+||..||++|.+. |++|++++|+.++ .+...+.|... ..++.|+++++|+||+++|+...
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~------G~~V~v~dr~~~~-~~~l~~~G~~~----~~s~~e~~~~~dvvi~~l~~~~~ 74 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA------GYELVVWNRTASK-AEPLTKLGATV----VENAIDAITPGGIVFSVLADDAA 74 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEC--------CTTTTTTCEE----CSSGGGGCCTTCEEEECCSSHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHC------CCeEEEEeCCHHH-HHHHHHcCCeE----eCCHHHHHhcCCceeeeccchhh
Confidence 5899999999999999999999 9998887766433 33445567664 56899999999999999999887
Q ss_pred HH-HH-HHHHhcCCCCcEEEEeCCchhhh---hhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceEEEeec
Q 021218 192 AD-NY-EKIFSCMKPNSILGLSHGFLLGH---LQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (316)
Q Consensus 192 ~~-vi-~ei~~~mk~gaiLid~aGv~l~~---l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~ 266 (316)
.+ ++ .++.+.++++.+++|.+.+.... +.+ .....++.|+- +|-.-++. .-..| ... +.+.
T Consensus 75 ~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~--~~~~~g~~~ld-apVsGg~~---~a~~g-------~l~-im~g 140 (297)
T 4gbj_A 75 VEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQ--VHEWYGAHYVG-APIFARPE---AVRAK-------VGN-ICLS 140 (297)
T ss_dssp HHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEEE-CCEECCHH---HHHHT-------CCE-EEEE
T ss_pred HHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHH--HHHhcCCceec-CCcCCCcc---ccccc-------cce-eecc
Confidence 65 54 47889999999999988764221 211 01123666664 33111111 01122 223 3333
Q ss_pred cCCCHHHHHHHHHHHHHcCCC
Q 021218 267 QDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 267 ~d~~~~a~e~a~~l~~alG~~ 287 (316)
. ++++.+.++.+++.+|.+
T Consensus 141 G--~~~~~~~~~~~l~~~g~~ 159 (297)
T 4gbj_A 141 G--NAGAKERIKPIVENFVKG 159 (297)
T ss_dssp E--CHHHHHHHHHHHHTTCSE
T ss_pred c--chhHHHHHHHHHHHhhCC
Confidence 2 357889999999999954
No 86
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.24 E-value=8.1e-12 Score=125.46 Aligned_cols=147 Identities=16% Similarity=0.097 Sum_probs=103.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH-----CCceecCCCcCCHHhhhcc---CCEEE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----AGFTEENGTLGDIYETISG---SDLVL 183 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~-----~G~~~~~~t~~~~~e~i~~---ADIVi 183 (316)
.+|||||+|+||.++|++|.+. |++|.+++|+.++ .+...+ .|+.. ..++++++++ +|+||
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~------G~~V~v~dr~~~~-~~~l~~~~~~~~gi~~----~~s~~e~v~~l~~aDvVi 79 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH------GFTVCAYNRTQSK-VDHFLANEAKGKSIIG----ATSIEDFISKLKRPRKVM 79 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSHH-HHHHHHTTTTTSSEEC----CSSHHHHHHTSCSSCEEE
T ss_pred CCEEEEeeHHHHHHHHHHHHHC------CCEEEEEeCCHHH-HHHHHcccccCCCeEE----eCCHHHHHhcCCCCCEEE
Confidence 6899999999999999999999 9998877776543 334444 46653 4578888876 99999
Q ss_pred EcccCc-hHHHHHHHHHhcCCCCcEEEEeCCchh---hhhhccccCC-CCCccEEEeccCCCchhhHHHHhcCccccCCC
Q 021218 184 LLISDA-AQADNYEKIFSCMKPNSILGLSHGFLL---GHLQSMGLDF-PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAG 258 (316)
Q Consensus 184 Lavp~~-~~~~vi~ei~~~mk~gaiLid~aGv~l---~~l~~~~~~~-~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G 258 (316)
+++|+. ...++++++.+.+++|++|+|.+.... ..+.+ .+ ..++.|+. +|-..+++ .... |
T Consensus 80 l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~---~l~~~g~~~v~-~pVsgg~~---~a~~-------G 145 (497)
T 2p4q_A 80 LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYE---ELKKKGILFVG-SGVSGGEE---GARY-------G 145 (497)
T ss_dssp ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH---HHHHTTCEEEE-EEEESHHH---HHHH-------C
T ss_pred EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHH---HHHHcCCceeC-CCcccChh---Hhhc-------C
Confidence 999996 556799999999999999998765432 22222 11 13567773 46222222 1122 3
Q ss_pred ceEEEeeccCCCHHHHHHHHHHHHHcCCC
Q 021218 259 INSSFAVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 259 ~~~iiap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
. . +.+.. ++++.+.++.+++.+|.+
T Consensus 146 ~-~-im~gg--~~e~~~~v~~ll~~~g~~ 170 (497)
T 2p4q_A 146 P-S-LMPGG--SEEAWPHIKNIFQSISAK 170 (497)
T ss_dssp C-E-EEEEE--CGGGHHHHHHHHHHHSCE
T ss_pred C-e-EEecC--CHHHHHHHHHHHHHhcCc
Confidence 4 3 34443 468899999999999965
No 87
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.24 E-value=5e-11 Score=109.79 Aligned_cols=149 Identities=16% Similarity=0.117 Sum_probs=103.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCchH
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~~ 191 (316)
++|+|||+|.||.++++.|.+. |++|.+.+++ ++..+...+.|+.. ..+.+++++++|+|++++|....
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~-~~~~~~~~~~g~~~----~~~~~~~~~~~D~vi~~vp~~~~ 73 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE------GVTVYAFDLM-EANVAAVVAQGAQA----CENNQKVAAASDIIFTSLPNAGI 73 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT------TCEEEEECSS-HHHHHHHHTTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred CEEEEECccHHHHHHHHHHHHC------CCeEEEEeCC-HHHHHHHHHCCCee----cCCHHHHHhCCCEEEEECCCHHH
Confidence 7999999999999999999998 8888766554 33344445557653 45788899999999999987664
Q ss_pred -HHHHH---HHHhcCCCCcEEEEeC-Cc--hhhhhhccccCCC-CCccEEEeccCCCchhhHHHHhcCccccCCCceEEE
Q 021218 192 -ADNYE---KIFSCMKPNSILGLSH-GF--LLGHLQSMGLDFP-KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (316)
Q Consensus 192 -~~vi~---ei~~~mk~gaiLid~a-Gv--~l~~l~~~~~~~~-~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~ii 263 (316)
..++. ++.+.++++++|++.+ |. ....+.. .++ .++.++. +|..++.. .... |...++
T Consensus 74 ~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~---~~~~~g~~~~~-~p~~~~~~---~a~~-------g~~~~~ 139 (301)
T 3cky_A 74 VETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAK---VAAEKGIDYVD-APVSGGTK---GAEA-------GTLTIM 139 (301)
T ss_dssp HHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHH---HHHHTTCEEEE-CCEESHHH---HHHH-------TCEEEE
T ss_pred HHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHH---HHHHcCCeEEE-ccCCCCHH---HHHc-------CCeEEE
Confidence 45775 7888899999988765 43 2233332 122 2566664 46443332 2222 343444
Q ss_pred eeccCCCHHHHHHHHHHHHHcCCCC
Q 021218 264 AVHQDVDGRATNVALGWSVALGSPF 288 (316)
Q Consensus 264 ap~~d~~~~a~e~a~~l~~alG~~~ 288 (316)
+.. +++..+.+..+++.+|.+.
T Consensus 140 ~~g---~~~~~~~v~~ll~~~g~~~ 161 (301)
T 3cky_A 140 VGA---SEAVFEKIQPVLSVIGKDI 161 (301)
T ss_dssp EES---CHHHHHHHHHHHHHHEEEE
T ss_pred ECC---CHHHHHHHHHHHHHhcCCE
Confidence 443 6788999999999999653
No 88
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.24 E-value=3e-12 Score=117.95 Aligned_cols=152 Identities=11% Similarity=0.038 Sum_probs=90.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCch
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vi-vg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~ 190 (316)
++|||||+|+||.+++++|.+. ++|+ +.+++.++..+.+.+.|. . ..+++++++++|+||+++|++.
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-------~~v~~v~~~~~~~~~~~~~~~g~-~----~~~~~~~~~~~DvVilav~~~~ 70 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-------YEIGYILSRSIDRARNLAEVYGG-K----AATLEKHPELNGVVFVIVPDRY 70 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----------CCCEECSSHHHHHHHHHHTCC-C----CCSSCCCCC---CEEECSCTTT
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-------CcEEEEEeCCHHHHHHHHHHcCC-c----cCCHHHHHhcCCEEEEeCChHH
Confidence 6899999999999999987642 3453 455543332233344564 2 4467778899999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEeC-CchhhhhhccccCCCCCccEEEec-----cCCCchhhHHHHhcCccccCCCceEEEe
Q 021218 191 QADNYEKIFSCMKPNSILGLSH-GFLLGHLQSMGLDFPKNIGVIAVC-----PKGMGPSVRRLYVQGKEINGAGINSSFA 264 (316)
Q Consensus 191 ~~~vi~ei~~~mk~gaiLid~a-Gv~l~~l~~~~~~~~~~i~vI~vh-----Pn~pg~~~r~lf~~G~e~~G~G~~~iia 264 (316)
..+++.++. +++++|++++ +++...++. . .+...| ||+|... +.+ .+.++.++
T Consensus 71 ~~~v~~~l~---~~~~ivi~~s~~~~~~~l~~---~-----~~~~~~p~~~~~g~~~~~--~~~--------~~~~~~~~ 129 (276)
T 2i76_A 71 IKTVANHLN---LGDAVLVHCSGFLSSEIFKK---S-----GRASIHPNFSFSSLEKAL--EMK--------DQIVFGLE 129 (276)
T ss_dssp HHHHHTTTC---CSSCCEEECCSSSCGGGGCS---S-----SEEEEEECSCC--CTTGG--GCG--------GGCCEEEC
T ss_pred HHHHHHHhc---cCCCEEEECCCCCcHHHHHH---h-----hccccchhhhcCCCchhH--HHh--------CCCeEEEE
Confidence 877777654 6888888776 455554443 1 223333 4433322 111 23555454
Q ss_pred eccCCCHHHHHHHHHHHHHcCCCCeeecChhHHHhhc
Q 021218 265 VHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSD 301 (316)
Q Consensus 265 p~~d~~~~a~e~a~~l~~alG~~~~~~tT~~~e~~~d 301 (316)
.. ++..+.++.+++.+|. .++..+.+++...|
T Consensus 130 ~~----~~~~~~~~~l~~~lG~-~~~~v~~~~~~~~~ 161 (276)
T 2i76_A 130 GD----ERGLPIVKKIAEEISG-KYFVIPSEKKKAYH 161 (276)
T ss_dssp CC----TTTHHHHHHHHHHHCS-CEEECCGGGHHHHH
T ss_pred eC----hHHHHHHHHHHHHhCC-CEEEECHHHHHHHH
Confidence 42 3568889999999995 56666655544333
No 89
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.23 E-value=4.3e-11 Score=119.11 Aligned_cols=148 Identities=14% Similarity=0.130 Sum_probs=103.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC---CceecCCCcCCHHhhhcc---CCEEEEc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---GFTEENGTLGDIYETISG---SDLVLLL 185 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~---G~~~~~~t~~~~~e~i~~---ADIViLa 185 (316)
++|||||+|.||.++|++|.+. |++|.+.+|+.++..+...+. |+.. ..++++++++ +|+|+++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~------G~~V~v~dr~~~~~~~l~~~~~~~gi~~----~~s~~e~v~~l~~aDvVila 75 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR------GYTVAIYNRTTSKTEEVFKEHQDKNLVF----TKTLEEFVGSLEKPRRIMLM 75 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSHHHHHHHHHHTTTSCEEE----CSSHHHHHHTBCSSCEEEEC
T ss_pred CcEEEEeeHHHHHHHHHHHHhC------CCEEEEEcCCHHHHHHHHHhCcCCCeEE----eCCHHHHHhhccCCCEEEEE
Confidence 6899999999999999999998 988877776544333333333 5553 4578888776 9999999
Q ss_pred ccCc-hHHHHHHHHHhcCCCCcEEEEeC-Cch--hhhhhccccCCC-CCccEEEeccCCCchhhHHHHhcCccccCCCce
Q 021218 186 ISDA-AQADNYEKIFSCMKPNSILGLSH-GFL--LGHLQSMGLDFP-KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGIN 260 (316)
Q Consensus 186 vp~~-~~~~vi~ei~~~mk~gaiLid~a-Gv~--l~~l~~~~~~~~-~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~ 260 (316)
+|+. ...++++++.+.+++|++|++++ |.. ...+.+ .++ .++.++ .+|...+... ... |.
T Consensus 76 vp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~---~l~~~g~~~v-~~pv~gg~~~---a~~-------g~- 140 (474)
T 2iz1_A 76 VQAGAATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNA---ELADSGINFI-GTGVSGGEKG---ALL-------GP- 140 (474)
T ss_dssp CCTTHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH---HTTTSSCEEE-EEEECSHHHH---HHH-------CC-
T ss_pred ccCchHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHH---HHHHCCCeEE-CCCCCCChhh---hcc-------CC-
Confidence 9996 45668999999999999999876 332 222332 222 356777 4575444331 122 33
Q ss_pred EEEeeccCCCHHHHHHHHHHHHHcCCC
Q 021218 261 SSFAVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 261 ~iiap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
.++ +.. ++++.+.++.+++.+|.+
T Consensus 141 ~i~-~gg--~~~~~~~v~~ll~~~g~~ 164 (474)
T 2iz1_A 141 SMM-PGG--QKEAYDLVAPIFEQIAAK 164 (474)
T ss_dssp CEE-EEE--CHHHHHHHHHHHHHHSCB
T ss_pred eEE-ecC--CHHHHHHHHHHHHHHhcc
Confidence 223 433 578999999999999975
No 90
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.23 E-value=4e-11 Score=115.52 Aligned_cols=153 Identities=14% Similarity=0.178 Sum_probs=104.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec---C-------CCcCCHHhhhccCCE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE---N-------GTLGDIYETISGSDL 181 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~---~-------~t~~~~~e~i~~ADI 181 (316)
|+|+|||.|+||.++|..|.+. |++|.++.|+. +..+...+.|.... + ....++.++++++|+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~------G~~V~l~~r~~-~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDv 102 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK------GQKVRLWSYES-DHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTD 102 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT------TCCEEEECSCH-HHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCE
T ss_pred CeEEEECccHHHHHHHHHHHHC------CCeEEEEeCCH-HHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCE
Confidence 7999999999999999999998 98888777653 33333333332100 0 013578889999999
Q ss_pred EEEcccCchHHHHHHHHHhcCCCCcEEEE-eCCchhh------hhhccccCCCCCccEEEeccCCCchhhHHHHhcCccc
Q 021218 182 VLLLISDAAQADNYEKIFSCMKPNSILGL-SHGFLLG------HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEI 254 (316)
Q Consensus 182 ViLavp~~~~~~vi~ei~~~mk~gaiLid-~aGv~l~------~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~ 254 (316)
||+++|++...++++++.++++++++|+. +.|+... .+++ .++...-.+...|+..... .
T Consensus 103 VilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~---~l~~~~~~vlsgP~~a~ev----~------ 169 (356)
T 3k96_A 103 ILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVAT---ELGQVPMAVISGPSLATEV----A------ 169 (356)
T ss_dssp EEECCCHHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHH---HHCSCCEEEEESSCCHHHH----H------
T ss_pred EEECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHH---HcCCCCEEEEECccHHHHH----H------
Confidence 99999999888899999999999998775 4566542 3433 3333223467788654322 1
Q ss_pred cCCCceEEEeeccCCCHHHHHHHHHHHHHcCCC
Q 021218 255 NGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 255 ~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
+|.+..++... .+.+..+.+++++...|++
T Consensus 170 --~g~pt~~via~-~~~~~~~~v~~lf~~~~~r 199 (356)
T 3k96_A 170 --ANLPTAVSLAS-NNSQFSKDLIERLHGQRFR 199 (356)
T ss_dssp --TTCCEEEEEEE-SCHHHHHHHHHHHCCSSEE
T ss_pred --cCCCeEEEEec-CCHHHHHHHHHHhCCCCee
Confidence 24455444433 3567778888888876644
No 91
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.23 E-value=1.7e-10 Score=114.65 Aligned_cols=152 Identities=14% Similarity=0.138 Sum_probs=108.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH-----------CCceec-------CCCcCCH
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEE-------NGTLGDI 172 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~-----------~G~~~~-------~~t~~~~ 172 (316)
|++|+|||.|.||.++|..+... |++|++.+++ ++..+.+.+ .|.... .....+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~------G~~V~l~D~~-~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 109 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV------GISVVAVESD-PKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST 109 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT------TCEEEEECSS-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG
T ss_pred CCEEEEECcCHHHHHHHHHHHhC------CCeEEEEECC-HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH
Confidence 48999999999999999999998 9988777654 333333222 121000 0002355
Q ss_pred HhhhccCCEEEEcccCchH--HHHHHHHHhcCCCCcEEEE-eCCchhhhhhccccCCCCCccEEEeccCCCchhhHHHHh
Q 021218 173 YETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILGL-SHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYV 249 (316)
Q Consensus 173 ~e~i~~ADIViLavp~~~~--~~vi~ei~~~mk~gaiLid-~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~ 249 (316)
+.+++||+||+++|.+.. .+++.++.+.++++++|+. +++..+..+.. ......+|++.||..|...
T Consensus 110 -~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~~la~---~~~~~~~~ig~hf~~P~~~------ 179 (463)
T 1zcj_A 110 -KELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIAS---STDRPQLVIGTHFFSPAHV------ 179 (463)
T ss_dssp -GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHT---TSSCGGGEEEEEECSSTTT------
T ss_pred -HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHHHHHH---HhcCCcceEEeecCCCccc------
Confidence 568999999999998764 3488889899999998875 44555555554 2333457999999755443
Q ss_pred cCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCC
Q 021218 250 QGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 250 ~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
+....+++....+++.++.+..+++.+|..
T Consensus 180 --------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~ 209 (463)
T 1zcj_A 180 --------MRLLEVIPSRYSSPTTIATVMSLSKKIGKI 209 (463)
T ss_dssp --------CCEEEEEECSSCCHHHHHHHHHHHHHTTCE
T ss_pred --------ceeEEEeCCCCCCHHHHHHHHHHHHHhCCE
Confidence 234667888899999999999999999954
No 92
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.23 E-value=2.2e-11 Score=113.50 Aligned_cols=148 Identities=18% Similarity=0.137 Sum_probs=101.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEccc-Cch
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS-DAA 190 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp-~~~ 190 (316)
++|+|||+|.||.++|+.|.+. |++|.+.+++.+ ..+...+.|... ..+.+++++++|+|++++| +..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~------g~~V~~~~~~~~-~~~~~~~~g~~~----~~~~~~~~~~~DvVi~av~~~~~ 99 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM------GHTVTVWNRTAE-KCDLFIQEGARL----GRTPAEVVSTCDITFACVSDPKA 99 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSGG-GGHHHHHTTCEE----CSCHHHHHHHCSEEEECCSSHHH
T ss_pred CeEEEEcccHHHHHHHHHHHhC------CCEEEEEeCCHH-HHHHHHHcCCEE----cCCHHHHHhcCCEEEEeCCCHHH
Confidence 7899999999999999999988 888877766543 344455567653 4578888999999999999 555
Q ss_pred HHHHHHH---HHhcCCCCcEEEEeCCchh---hhhhccccCC-CCCccEEEeccCCCchhhHHHHhcCccccCCCceEEE
Q 021218 191 QADNYEK---IFSCMKPNSILGLSHGFLL---GHLQSMGLDF-PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (316)
Q Consensus 191 ~~~vi~e---i~~~mk~gaiLid~aGv~l---~~l~~~~~~~-~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~ii 263 (316)
..+++.+ +++.++++++|++++.... ..+.. .+ ..+..++.. |. ++... ... .|...++
T Consensus 100 ~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~---~~~~~~~~~v~~-p~-~g~~~--~~~-------~g~~~~~ 165 (316)
T 2uyy_A 100 AKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQ---VIVSRGGRFLEA-PV-SGNQQ--LSN-------DGMLVIL 165 (316)
T ss_dssp HHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHH---HHHHTTCEEEEC-CE-ESCHH--HHH-------HTCEEEE
T ss_pred HHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHH---HHHHcCCEEEEc-Cc-cCChh--HHh-------hCCEEEE
Confidence 6667764 3578899999998876542 22222 22 135667654 42 11111 111 2344444
Q ss_pred eeccCCCHHHHHHHHHHHHHcCCC
Q 021218 264 AVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 264 ap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
+.. +++..+.+..+++.+|.+
T Consensus 166 ~~g---~~~~~~~v~~ll~~~g~~ 186 (316)
T 2uyy_A 166 AAG---DRGLYEDCSSCFQAMGKT 186 (316)
T ss_dssp EEE---CHHHHHHTHHHHHHHEEE
T ss_pred eCC---CHHHHHHHHHHHHHhcCC
Confidence 443 468889999999999954
No 93
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.23 E-value=6.7e-11 Score=118.71 Aligned_cols=153 Identities=16% Similarity=0.048 Sum_probs=103.5
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecC-CCcCCHHhhhc---cCCEEEEcc
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN-GTLGDIYETIS---GSDLVLLLI 186 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~-~t~~~~~e~i~---~ADIViLav 186 (316)
|++|||||+|.||.++|++|.+. |++|.+++++.+ ..+...+.+..... ....+++|+++ ++|+|++++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~------G~~V~v~dr~~~-~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~V 76 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDH------GFVVCAFNRTVS-KVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLV 76 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSTH-HHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECS
T ss_pred CCEEEEEChhHHHHHHHHHHHHC------CCEEEEEeCCHH-HHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEec
Confidence 37999999999999999999999 998887776654 34444443321000 01357888876 599999999
Q ss_pred cCch-HHHHHHHHHhcCCCCcEEEEeCCchhh---hhhccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCceEE
Q 021218 187 SDAA-QADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSS 262 (316)
Q Consensus 187 p~~~-~~~vi~ei~~~mk~gaiLid~aGv~l~---~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~i 262 (316)
|+.. ..++++++.+++++|++|+|.+..... .+.. .....++.|+.. |- .+.+ ..-+.| . +
T Consensus 77 p~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~--~l~~~Gi~fvd~-pV-sGg~--~gA~~G-------~-~- 141 (484)
T 4gwg_A 77 KAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCR--DLKAKGILFVGS-GV-SGGE--EGARYG-------P-S- 141 (484)
T ss_dssp CSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEEEE-EE-ESHH--HHHHHC-------C-E-
T ss_pred CChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHH--HHHhhccccccC-Cc-cCCH--HHHhcC-------C-e-
Confidence 9975 456899999999999999998765421 1111 011246778764 62 2222 112233 3 4
Q ss_pred EeeccCCCHHHHHHHHHHHHHcCCC
Q 021218 263 FAVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 263 iap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
+.+.. ++++.+.++.+++.+|.+
T Consensus 142 im~GG--~~ea~~~v~pll~~ig~~ 164 (484)
T 4gwg_A 142 LMPGG--NKEAWPHIKTIFQGIAAK 164 (484)
T ss_dssp EEEEE--CGGGHHHHHHHHHHHSCB
T ss_pred eecCC--CHHHHHHHHHHHHHhcCc
Confidence 44544 368999999999999964
No 94
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.22 E-value=3.7e-11 Score=107.07 Aligned_cols=152 Identities=17% Similarity=0.143 Sum_probs=99.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCchH
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~~ 191 (316)
++|+|||.|.||.++++.|.+. |++|.+.+|+. +..+...+.|+.. .+.+++++++|+|++++|++..
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~------g~~V~~~~r~~-~~~~~~~~~g~~~-----~~~~~~~~~~DvVi~av~~~~~ 96 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS------GFKVVVGSRNP-KRTARLFPSAAQV-----TFQEEAVSSPEVIFVAVFREHY 96 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSH-HHHHHHSBTTSEE-----EEHHHHTTSCSEEEECSCGGGS
T ss_pred CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHcCCce-----ecHHHHHhCCCEEEECCChHHH
Confidence 7999999999999999999998 88887776653 3333333346552 2778889999999999998766
Q ss_pred HHHHHHHHhcCCCCcEEEEe-CCchhhhh----------hccccCCCCCccEEEeccCCCchhhHHHHhcCccccCCCce
Q 021218 192 ADNYEKIFSCMKPNSILGLS-HGFLLGHL----------QSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGIN 260 (316)
Q Consensus 192 ~~vi~ei~~~mk~gaiLid~-aGv~l~~l----------~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~ 260 (316)
.++++ +.+.+ ++++|+++ .|.....+ +. .++ +.++++.+ |+..... +..|-. . |..
T Consensus 97 ~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~---~l~-~~~vv~~~-n~~~~~~---~~~~~~-~--g~~ 163 (215)
T 2vns_A 97 SSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLAS---LFP-TCTVVKAF-NVISAWT---LQAGPR-D--GNR 163 (215)
T ss_dssp GGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHH---HCT-TSEEEEEC-TTBCHHH---HHTCSC-S--SCC
T ss_pred HHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHH---HCC-CCeEEecc-ccccHhH---hccccc-C--Cce
Confidence 56664 44445 78888865 45544322 23 344 45788887 4433221 111211 1 222
Q ss_pred EEEeeccCCCHHHHHHHHHHHHHcCCCCee
Q 021218 261 SSFAVHQDVDGRATNVALGWSVALGSPFTF 290 (316)
Q Consensus 261 ~iiap~~d~~~~a~e~a~~l~~alG~~~~~ 290 (316)
.++... .++++.+.++++++.+|..-+.
T Consensus 164 ~~~~~g--~~~~~~~~v~~ll~~~G~~~~~ 191 (215)
T 2vns_A 164 QVPICG--DQPEAKRAVSEMALAMGFMPVD 191 (215)
T ss_dssp EEEEEE--SCHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEec--CCHHHHHHHHHHHHHcCCceEe
Confidence 223322 3678999999999999975433
No 95
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.21 E-value=1.6e-11 Score=112.02 Aligned_cols=146 Identities=13% Similarity=0.084 Sum_probs=98.9
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCch
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~ 190 (316)
||+|+|||+|.||.++++.|.+ |++|.+.+++.+ ..+...+.|+.. .. .+++++++|+|++++|...
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-------g~~V~~~~~~~~-~~~~~~~~g~~~----~~-~~~~~~~~D~vi~~v~~~~ 67 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-------RFPTLVWNRTFE-KALRHQEEFGSE----AV-PLERVAEARVIFTCLPTTR 67 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-------TSCEEEECSSTH-HHHHHHHHHCCE----EC-CGGGGGGCSEEEECCSSHH
T ss_pred CCeEEEEcccHHHHHHHHHHhC-------CCeEEEEeCCHH-HHHHHHHCCCcc----cC-HHHHHhCCCEEEEeCCChH
Confidence 5799999999999999998853 567776666543 333344445542 23 6678899999999999886
Q ss_pred -HHHHHHHHHhcCCCCcEEEEeCCch---hhhhhccccCCC-CCccEEEeccCCCchhhHHHHhcCccccCCCceEEEee
Q 021218 191 -QADNYEKIFSCMKPNSILGLSHGFL---LGHLQSMGLDFP-KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (316)
Q Consensus 191 -~~~vi~ei~~~mk~gaiLid~aGv~---l~~l~~~~~~~~-~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap 265 (316)
...+++++.+.++++++|++.+... ...+.+ .++ .++.++.. |..+++. .... |...+++.
T Consensus 68 ~~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~---~~~~~g~~~~~~-p~~~~~~---~~~~-------g~~~~~~~ 133 (289)
T 2cvz_A 68 EVYEVAEALYPYLREGTYWVDATSGEPEASRRLAE---RLREKGVTYLDA-PVSGGTS---GAEA-------GTLTVMLG 133 (289)
T ss_dssp HHHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHH---HHHTTTEEEEEC-CEESHHH---HHHH-------TCEEEEEE
T ss_pred HHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHH---HHHHcCCEEEEe-cCCCChh---HHhh-------CCeEEEEC
Confidence 5568888989999999998876543 223332 222 35778875 8554443 2222 34444443
Q ss_pred ccCCCHHHHHHHHHHHHHcCCC
Q 021218 266 HQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 266 ~~d~~~~a~e~a~~l~~alG~~ 287 (316)
. +++..+.++.++ .+|.+
T Consensus 134 ~---~~~~~~~~~~ll-~~g~~ 151 (289)
T 2cvz_A 134 G---PEEAVERVRPFL-AYAKK 151 (289)
T ss_dssp S---CHHHHHHHGGGC-TTEEE
T ss_pred C---CHHHHHHHHHHH-hhcCC
Confidence 2 578889999999 99864
No 96
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=99.19 E-value=7.3e-12 Score=122.26 Aligned_cols=151 Identities=17% Similarity=0.154 Sum_probs=101.6
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEc
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLa 185 (316)
.+|.| ++|||||+|+||.++|+.++.+ |++|++.++... ....|.. ..++++++++||+|++|
T Consensus 112 ~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~d~~~~-----~~~~g~~-----~~~l~ell~~aDvV~l~ 174 (380)
T 2o4c_A 112 ADLAE-RTYGVVGAGQVGGRLVEVLRGL------GWKVLVCDPPRQ-----AREPDGE-----FVSLERLLAEADVISLH 174 (380)
T ss_dssp CCGGG-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECHHHH-----HHSTTSC-----CCCHHHHHHHCSEEEEC
T ss_pred cccCC-CEEEEEeCCHHHHHHHHHHHHC------CCEEEEEcCChh-----hhccCcc-----cCCHHHHHHhCCEEEEe
Confidence 58999 9999999999999999999999 999876654311 1123432 45899999999999999
Q ss_pred ccCchH----H-HHHH-HHHhcCCCCcEEEEeC-Cch------hhhhhccccCCCCCccEEEeccCCCchhhHHHHhcCc
Q 021218 186 ISDAAQ----A-DNYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGK 252 (316)
Q Consensus 186 vp~~~~----~-~vi~-ei~~~mk~gaiLid~a-Gv~------l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~ 252 (316)
+|.+.. + .+++ +.++.||+|++|++++ |-. ...+++ +......++|...+|. |... ++.
T Consensus 175 ~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~-g~i~~A~LDV~~~EP~-~~~~---l~~--- 246 (380)
T 2o4c_A 175 TPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEG-GADLEVALDVWEGEPQ-ADPE---LAA--- 246 (380)
T ss_dssp CCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHT-TCCEEEEESCCTTTTS-CCHH---HHT---
T ss_pred ccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHh-CCCceEEeeeeccCCC-Cchh---hcc---
Confidence 999986 5 4664 7899999999999875 321 222332 1122345666667783 3222 332
Q ss_pred cccCCCceEEEeecc-CCCHHHHH-----HHHHHHHHcCCC
Q 021218 253 EINGAGINSSFAVHQ-DVDGRATN-----VALGWSVALGSP 287 (316)
Q Consensus 253 e~~G~G~~~iiap~~-d~~~~a~e-----~a~~l~~alG~~ 287 (316)
.|.++|||- ..+.++.+ .++.+...++..
T Consensus 247 ------~nvi~TPHiag~t~e~~~~~~~~~~~nl~~~l~g~ 281 (380)
T 2o4c_A 247 ------RCLIATPHIAGYSLEGKLRGTAQIYQAYCAWRGIA 281 (380)
T ss_dssp ------TCSEECSSCTTCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred ------CCEEEccccCcCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 267899986 44444433 334444555443
No 97
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.18 E-value=2.5e-11 Score=121.10 Aligned_cols=147 Identities=17% Similarity=0.089 Sum_probs=101.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH-----CCceecCCCcCCHHhhh---ccCCEEE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----AGFTEENGTLGDIYETI---SGSDLVL 183 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~-----~G~~~~~~t~~~~~e~i---~~ADIVi 183 (316)
++|||||+|.||.++|++|.+. |++|.+.+|+.++ .+...+ .|+.. ..++++++ +++|+|+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~------G~~V~v~dr~~~~-~~~l~~~~~~g~gi~~----~~~~~e~v~~l~~aDvVi 71 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH------GFVVCAFNRTVSK-VDDFLANEAKGTKVLG----AHSLEEMVSKLKKPRRII 71 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSTHH-HHHHHHTTTTTSSCEE----CSSHHHHHHHBCSSCEEE
T ss_pred CeEEEEChHHHHHHHHHHHHHC------CCeEEEEeCCHHH-HHHHHhccccCCCeEE----eCCHHHHHhhccCCCEEE
Confidence 6899999999999999999998 9988877766443 334444 45543 45788877 4899999
Q ss_pred EcccCc-hHHHHHHHHHhcCCCCcEEEEeC-Cch--hhhhhccccCC-CCCccEEEeccCCCchhhHHHHhcCccccCCC
Q 021218 184 LLISDA-AQADNYEKIFSCMKPNSILGLSH-GFL--LGHLQSMGLDF-PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAG 258 (316)
Q Consensus 184 Lavp~~-~~~~vi~ei~~~mk~gaiLid~a-Gv~--l~~l~~~~~~~-~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G~G 258 (316)
+++|+. ...++++++.+++++|++|++.+ |.. ...+.+ .+ ..++.++ .+|...+.+ .... |
T Consensus 72 laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~---~l~~~g~~~v-~~pv~g~~~---~a~~-------g 137 (482)
T 2pgd_A 72 LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCR---DLKDKGILFV-GSGVSGGED---GARY-------G 137 (482)
T ss_dssp ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHH---HHHHTTCEEE-EEEEESHHH---HHHH-------C
T ss_pred EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHH---HHHHcCCeEe-CCCCCCChh---hhcc-------C
Confidence 999997 55679999999999999999875 332 112222 11 1356677 457543322 1122 3
Q ss_pred ceEEEeeccCCCHHHHHHHHHHHHHcCCC
Q 021218 259 INSSFAVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 259 ~~~iiap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
. . +.+.. ++++.+.++.+++.+|.+
T Consensus 138 ~-~-i~~gg--~~e~~~~v~~ll~~~g~~ 162 (482)
T 2pgd_A 138 P-S-LMPGG--NKEAWPHIKAIFQGIAAK 162 (482)
T ss_dssp C-E-EEEEE--CTTTHHHHHHHHHHHSCB
T ss_pred C-e-EEeCC--CHHHHHHHHHHHHHhhhh
Confidence 4 3 33433 357888999999999975
No 98
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.18 E-value=1.2e-10 Score=105.49 Aligned_cols=90 Identities=18% Similarity=0.241 Sum_probs=70.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC-CcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCch
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~-~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~ 190 (316)
|+|+|||+|+||.++|++|.+. |++|++.++. +++..+...+.|+. .+.+++++++|+||+++|++.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~------g~~V~~~~~~~~~~~~~~~~~~g~~------~~~~~~~~~aDvvi~~v~~~~ 68 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR------GVEVVTSLEGRSPSTIERARTVGVT------ETSEEDVYSCPVVISAVTPGV 68 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT------TCEEEECCTTCCHHHHHHHHHHTCE------ECCHHHHHTSSEEEECSCGGG
T ss_pred CeEEEEechHHHHHHHHHHHHC------CCeEEEeCCccCHHHHHHHHHCCCc------CCHHHHHhcCCEEEEECCCHH
Confidence 5899999999999999999998 9888774431 23334444445654 266788899999999999998
Q ss_pred HHHHHHHHHhcCCCCcEEEEeCCch
Q 021218 191 QADNYEKIFSCMKPNSILGLSHGFL 215 (316)
Q Consensus 191 ~~~vi~ei~~~mk~gaiLid~aGv~ 215 (316)
..+.+.++.+.+++ +|+++++..
T Consensus 69 ~~~~~~~~~~~~~~--~vi~~s~~~ 91 (264)
T 1i36_A 69 ALGAARRAGRHVRG--IYVDINNIS 91 (264)
T ss_dssp HHHHHHHHHTTCCS--EEEECSCCC
T ss_pred HHHHHHHHHHhcCc--EEEEccCCC
Confidence 88777788888877 888887764
No 99
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.16 E-value=6.9e-11 Score=109.08 Aligned_cols=166 Identities=16% Similarity=0.113 Sum_probs=104.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-cEEEEEecCCcccHHHHHH-CCceecC--CC-------cCCHHhhhccCC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARA-AGFTEEN--GT-------LGDIYETISGSD 180 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G-~~Vivg~r~~~~s~~~A~~-~G~~~~~--~t-------~~~~~e~i~~AD 180 (316)
|+|+|||.|+||.++|..|.+... ...| ++|.+..| ++..+...+ .|+...+ +. ..+..+.++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~-~~~g~~~V~~~~r--~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAA-ATDGLLEVSWIAR--GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVD 85 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHH-HTTSSEEEEEECC--HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCcc-ccCCCCCEEEEEc--HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCC
Confidence 689999999999999999876400 0003 67777766 344445555 6765321 00 002345678999
Q ss_pred EEEEcccCchHHHHHHHHHhcCCCCcEEEE-eCCchh-hhhhccccCCCCCccEEEeccCCCchhhHHHHhcCc-cccCC
Q 021218 181 LVLLLISDAAQADNYEKIFSCMKPNSILGL-SHGFLL-GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGK-EINGA 257 (316)
Q Consensus 181 IViLavp~~~~~~vi~ei~~~mk~gaiLid-~aGv~l-~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~-e~~G~ 257 (316)
+||+++|+....++++++.++++++++|++ ..|+.. ..+.+ .+++. .+++++|+.+..... .|. +..+.
T Consensus 86 ~vil~vk~~~~~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~~---~l~~~-~v~~g~~~~~a~~~~----pg~~~~~~~ 157 (317)
T 2qyt_A 86 YILFCTKDYDMERGVAEIRPMIGQNTKILPLLNGADIAERMRT---YLPDT-VVWKGCVYISARKSA----PGLITLEAD 157 (317)
T ss_dssp EEEECCSSSCHHHHHHHHGGGEEEEEEEEECSCSSSHHHHHTT---TSCTT-TBCEEEEEEEEEEEE----TTEEEEEEE
T ss_pred EEEEecCcccHHHHHHHHHhhcCCCCEEEEccCCCCcHHHHHH---HCCCC-cEEEEEEEEEEEEcC----CCEEEEcCC
Confidence 999999999998899999999988887775 567754 44544 45543 567777754443210 010 01123
Q ss_pred CceEEEeec-cCCCHHHHHHHHHHHHHcCCCCe
Q 021218 258 GINSSFAVH-QDVDGRATNVALGWSVALGSPFT 289 (316)
Q Consensus 258 G~~~iiap~-~d~~~~a~e~a~~l~~alG~~~~ 289 (316)
|...++... ...+.+.. .+..++...|.+..
T Consensus 158 g~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~~~ 189 (317)
T 2qyt_A 158 RELFYFGSGLPEQTDDEV-RLAELLTAAGIRAY 189 (317)
T ss_dssp EEEEEEECCSSSCCHHHH-HHHHHHHHTTCCEE
T ss_pred CceEEEcCCCCCCcCHHH-HHHHHHHHCCCCCE
Confidence 333335544 44455666 78899999996533
No 100
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.16 E-value=9.8e-11 Score=116.81 Aligned_cols=148 Identities=16% Similarity=0.143 Sum_probs=101.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCC-------ceecCCCcCCHHhhhcc---CCE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-------FTEENGTLGDIYETISG---SDL 181 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G-------~~~~~~t~~~~~e~i~~---ADI 181 (316)
|+|||||+|.||.++|++|.+. |++|.+.+|+.++..+...+.| +.. ..++++++++ +|+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~------G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~----~~~~~e~v~~l~~aDv 71 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK------GFKVAVFNRTYSKSEEFMKANASAPFAGNLKA----FETMEAFAASLKKPRK 71 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSHHHHHHHHHHTTTSTTGGGEEE----CSCHHHHHHHBCSSCE
T ss_pred CEEEEEChHHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEE----ECCHHHHHhcccCCCE
Confidence 5799999999999999999998 9988877765443333333445 332 4578888774 999
Q ss_pred EEEcccCc-hHHHHHHHHHhcCCCCcEEEEeC-Cch--hhhhhccccCC-CCCccEEEeccCCCchhhHHHHhcCccccC
Q 021218 182 VLLLISDA-AQADNYEKIFSCMKPNSILGLSH-GFL--LGHLQSMGLDF-PKNIGVIAVCPKGMGPSVRRLYVQGKEING 256 (316)
Q Consensus 182 ViLavp~~-~~~~vi~ei~~~mk~gaiLid~a-Gv~--l~~l~~~~~~~-~~~i~vI~vhPn~pg~~~r~lf~~G~e~~G 256 (316)
|++++|+. ...++++++.+.+++|++|++.+ |.. ...+.+ .+ ..++.++. +|...+.+ ....
T Consensus 72 VilaVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~---~l~~~g~~~v~-~pv~gg~~---~a~~------ 138 (478)
T 1pgj_A 72 ALILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQ---QLEAAGLRFLG-MGISGGEE---GARK------ 138 (478)
T ss_dssp EEECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHH---HHHTTTCEEEE-EEEESHHH---HHHH------
T ss_pred EEEecCChHHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHH---HHHHCCCeEEE-eeccCCHH---HHhc------
Confidence 99999996 55678899999999999998865 432 222222 11 23566664 46443332 1222
Q ss_pred CCceEEEeeccCCCHHHHHHHHHHHHHcCCC
Q 021218 257 AGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 257 ~G~~~iiap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
|. . +.+.. ++++.+.++.+++.+|.+
T Consensus 139 -g~-~-i~~gg--~~~~~~~v~~ll~~~g~~ 164 (478)
T 1pgj_A 139 -GP-A-FFPGG--TLSVWEEIRPIVEAAAAK 164 (478)
T ss_dssp -CC-E-EEEEE--CHHHHHHHHHHHHHHSCB
T ss_pred -CC-e-EeccC--CHHHHHHHHHHHHHhccc
Confidence 23 3 33333 478999999999999975
No 101
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=99.16 E-value=1.9e-11 Score=119.36 Aligned_cols=150 Identities=17% Similarity=0.144 Sum_probs=103.5
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEc
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLa 185 (316)
.+|.| ++|||||+|+||.++|+.++.+ |++|+++++.. .....+.. ..+++|++++||+|++|
T Consensus 115 ~~l~g-ktvGIIGlG~IG~~vA~~l~a~------G~~V~~~d~~~-----~~~~~~~~-----~~sl~ell~~aDiV~l~ 177 (381)
T 3oet_A 115 FSLRD-RTIGIVGVGNVGSRLQTRLEAL------GIRTLLCDPPR-----AARGDEGD-----FRTLDELVQEADVLTFH 177 (381)
T ss_dssp CCGGG-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECHHH-----HHTTCCSC-----BCCHHHHHHHCSEEEEC
T ss_pred CccCC-CEEEEEeECHHHHHHHHHHHHC------CCEEEEECCCh-----HHhccCcc-----cCCHHHHHhhCCEEEEc
Confidence 68999 9999999999999999999999 99987775421 11112222 46899999999999999
Q ss_pred ccCchH----HH-HHH-HHHhcCCCCcEEEEeC-Cch------hhhhhccccCCCCCccEEEeccCCCchhhHHHHhcCc
Q 021218 186 ISDAAQ----AD-NYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGK 252 (316)
Q Consensus 186 vp~~~~----~~-vi~-ei~~~mk~gaiLid~a-Gv~------l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~ 252 (316)
+|.+.. ++ +++ +.++.||+|++|++++ |-. +..+++ +.......+|....|.. .. .++..
T Consensus 178 ~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~-g~i~gA~LDV~e~EP~~-~~---~L~~~-- 250 (381)
T 3oet_A 178 TPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNA-GQPLSVVLDVWEGEPDL-NV---ALLEA-- 250 (381)
T ss_dssp CCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHT-TCCEEEEESCCTTTTSC-CH---HHHHH--
T ss_pred CcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHh-CCCeEEEeeccccCCCC-cc---hhhhC--
Confidence 999887 55 664 7889999999999876 321 223433 11223456677777843 22 24432
Q ss_pred cccCCCceEEEeecc-CCCHHHHHH-----HHHHHHHcCC
Q 021218 253 EINGAGINSSFAVHQ-DVDGRATNV-----ALGWSVALGS 286 (316)
Q Consensus 253 e~~G~G~~~iiap~~-d~~~~a~e~-----a~~l~~alG~ 286 (316)
+.++|||- ..+.++.+. ++.+...++.
T Consensus 251 -------~~i~TPHiag~t~e~~~~~~~~~~~~l~~~l~~ 283 (381)
T 3oet_A 251 -------VDIGTSHIAGYTLEGKARGTTQVFEAYSAFIGR 283 (381)
T ss_dssp -------SSEECSSCTTCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred -------CEEECCccCcCcHHHHHHHHHHHHHHHHHHHcC
Confidence 35789986 344554443 3556666764
No 102
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.15 E-value=9.8e-11 Score=110.40 Aligned_cols=144 Identities=13% Similarity=0.040 Sum_probs=93.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCC-----------ceecCCCcCCHHhhhccCC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-----------FTEENGTLGDIYETISGSD 180 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G-----------~~~~~~t~~~~~e~i~~AD 180 (316)
++|+|||.|+||.++|.+|.+. |++|.+++|+.++ .+...+.| +.. ..+.++ ++++|
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~------G~~V~~~~r~~~~-~~~l~~~g~~~~~~~~~~~~~~----~~~~~~-~~~aD 82 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHEN------GEEVILWARRKEI-VDLINVSHTSPYVEESKITVRA----TNDLEE-IKKED 82 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSHHH-HHHHHHHSCBTTBTTCCCCSEE----ESCGGG-CCTTE
T ss_pred CcEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCHHH-HHHHHHhCCcccCCCCeeeEEE----eCCHHH-hcCCC
Confidence 8999999999999999999998 9998888776433 33333334 221 346777 89999
Q ss_pred EEEEcccCchHHHHHHHHHhcCCCCcEEEEeC-Cchhhhhh---cc-ccCCCCCccEEEeccCCCchhhHHHHhcCcccc
Q 021218 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH-GFLLGHLQ---SM-GLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEIN 255 (316)
Q Consensus 181 IViLavp~~~~~~vi~ei~~~mk~gaiLid~a-Gv~l~~l~---~~-~~~~~~~i~vI~vhPn~pg~~~r~lf~~G~e~~ 255 (316)
+||+++|++...++++++.+ ++++|+++. |+.....+ +. ...++ ....++.+|+.+... +
T Consensus 83 vVil~vk~~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~-~~~~~~~~P~~~~~~-------~---- 147 (335)
T 1z82_A 83 ILVIAIPVQYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILG-CPYAVLSGPSHAEEV-------A---- 147 (335)
T ss_dssp EEEECSCGGGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTC-CCEEEEESSCCHHHH-------H----
T ss_pred EEEEECCHHHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcC-CceEEEECCccHHHH-------h----
Confidence 99999999887788877655 788877665 76532111 00 00223 234678999886544 2
Q ss_pred CCCceEEEeeccCCCHHHHHHHHHHHHHcCCC
Q 021218 256 GAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 256 G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
.|....++...+. .+.+..+++..|.+
T Consensus 148 -~g~~~~~~~g~~~----~~~~~~ll~~~g~~ 174 (335)
T 1z82_A 148 -KKLPTAVTLAGEN----SKELQKRISTEYFR 174 (335)
T ss_dssp -TTCCEEEEEEETT----HHHHHHHHCCSSEE
T ss_pred -CCCceEEEEEehh----HHHHHHHhCCCCEE
Confidence 2343223332221 56777888877754
No 103
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.13 E-value=6.4e-10 Score=116.33 Aligned_cols=152 Identities=12% Similarity=0.063 Sum_probs=108.0
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH-----------CCceec-------C--CCcC
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEE-------N--GTLG 170 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~-----------~G~~~~-------~--~t~~ 170 (316)
|++|+|||.|.||.++|..+.+. |++|++.+++.+ ..+.+.+ .|.... + ....
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~a------G~~V~l~D~~~~-~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~ 384 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILS------NYPVILKEVNEK-FLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSL 384 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT------TCCEEEECSSHH-HHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEES
T ss_pred CcEEEEEcCCHhhHHHHHHHHhC------CCEEEEEECCHH-HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeC
Confidence 58899999999999999999998 999887776533 2322211 232100 0 0123
Q ss_pred CHHhhhccCCEEEEcccCchHH--HHHHHHHhcCCCCcEEE-EeCCchhhhhhccccCCCCCccEEEeccCCCchhhHHH
Q 021218 171 DIYETISGSDLVLLLISDAAQA--DNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRL 247 (316)
Q Consensus 171 ~~~e~i~~ADIViLavp~~~~~--~vi~ei~~~mk~gaiLi-d~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~l 247 (316)
+. +.+++||+||.++|.+... +++.++.++++++++|+ .++++.+..+.. .....-+|++.|+--|...
T Consensus 385 d~-~~~~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~---~~~~p~~~iG~hf~~P~~~---- 456 (725)
T 2wtb_A 385 DY-ESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLNKIGE---RTKSQDRIVGAHFFSPAHI---- 456 (725)
T ss_dssp SS-GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTT---TCSCTTTEEEEEECSSTTT----
T ss_pred CH-HHHCCCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHHHHHH---HhcCCCCEEEecCCCCccc----
Confidence 44 5789999999999988754 47888999999999886 466777666554 2222246899998545433
Q ss_pred HhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCC
Q 021218 248 YVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 248 f~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
+....+.+...++++.++.+..+++.+|..
T Consensus 457 ----------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~ 486 (725)
T 2wtb_A 457 ----------MPLLEIVRTNHTSAQVIVDLLDVGKKIKKT 486 (725)
T ss_dssp ----------CCEEEEEECSSCCHHHHHHHHHHHHHTTCE
T ss_pred ----------CceEEEEECCCCCHHHHHHHHHHHHHhCCE
Confidence 134567888889999999999999999954
No 104
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.11 E-value=6.6e-10 Score=104.00 Aligned_cols=153 Identities=20% Similarity=0.143 Sum_probs=105.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecC--CC--------cCCHHhhhccCCE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN--GT--------LGDIYETISGSDL 181 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~--~t--------~~~~~e~i~~ADI 181 (316)
|+|+|||.|+||.++|..|.+. |.+|.+..|.. .+..++.|+.... +. ..+.+ .++.+|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~---~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~-~~~~~D~ 72 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS------GEDVHFLLRRD---YEAIAGNGLKVFSINGDFTLPHVKGYRAPE-EIGPMDL 72 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT------SCCEEEECSTT---HHHHHHTCEEEEETTCCEEESCCCEESCHH-HHCCCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCeEEEEEcCc---HHHHHhCCCEEEcCCCeEEEeeceeecCHH-HcCCCCE
Confidence 7899999999999999999998 88888877753 3555667764321 10 13444 4689999
Q ss_pred EEEcccCchHHHHHHHHHhcCCCCcEEE-EeCCch-hhhhhccccCCCCCccEEEecc------CCCchhhHHHHhcCcc
Q 021218 182 VLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFL-LGHLQSMGLDFPKNIGVIAVCP------KGMGPSVRRLYVQGKE 253 (316)
Q Consensus 182 ViLavp~~~~~~vi~ei~~~mk~gaiLi-d~aGv~-l~~l~~~~~~~~~~i~vI~vhP------n~pg~~~r~lf~~G~e 253 (316)
|++++|++...++++++.++++++++|+ ...|+. ...+.+ .+|+ .+++++++ .+|+... .
T Consensus 73 vilavk~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~---~~~~-~~v~~~~~~~~a~~~~p~~v~-----~--- 140 (312)
T 3hn2_A 73 VLVGLKTFANSRYEELIRPLVEEGTQILTLQNGLGNEEALAT---LFGA-ERIIGGVAFLCSNRGEPGEVH-----H--- 140 (312)
T ss_dssp EEECCCGGGGGGHHHHHGGGCCTTCEEEECCSSSSHHHHHHH---HTCG-GGEEEEEEEEECCBCSSSEEE-----E---
T ss_pred EEEecCCCCcHHHHHHHHhhcCCCCEEEEecCCCCcHHHHHH---HCCC-CcEEEEEEEeeeEEcCCcEEE-----E---
Confidence 9999999999999999999999998765 667885 455554 4554 35555442 3444431 1
Q ss_pred ccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCCC
Q 021218 254 INGAGINSSFAVHQDVDGRATNVALGWSVALGSPF 288 (316)
Q Consensus 254 ~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~~ 288 (316)
.|.|. ..|...+..+.+..+.+.+++...|.+.
T Consensus 141 -~~~g~-~~ig~~~~~~~~~~~~l~~~l~~~g~~~ 173 (312)
T 3hn2_A 141 -LGAGR-IILGEFLPRDTGRIEELAAMFRQAGVDC 173 (312)
T ss_dssp -CEEEE-EEEEESSCCCSHHHHHHHHHHHHTTCCE
T ss_pred -CCCCe-EEEecCCCCccHHHHHHHHHHHhCCCCc
Confidence 12333 3355554445566777788888888654
No 105
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.09 E-value=1.9e-10 Score=104.47 Aligned_cols=153 Identities=17% Similarity=0.121 Sum_probs=97.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC---Cc--eecCCCcCCHHhhhccCCEEEEcc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---GF--TEENGTLGDIYETISGSDLVLLLI 186 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~---G~--~~~~~t~~~~~e~i~~ADIViLav 186 (316)
|+|+|||.|+||.++|..|.+. |++|.+.+|+.++..+ .... |. .. .-...+ .+.++++|+||+++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~~~~~~-l~~~~~~~~~~~~-~~~~~~-~~~~~~~d~vi~~v 71 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ------GHEVQGWLRVPQPYCS-VNLVETDGSIFNE-SLTAND-PDFLATSDLLLVTL 71 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCSEEE-EEEECTTSCEEEE-EEEESC-HHHHHTCSEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhC------CCCEEEEEcCccceee-EEEEcCCCceeee-eeeecC-ccccCCCCEEEEEe
Confidence 5899999999999999999998 9988887776432211 1111 11 00 001223 46778999999999
Q ss_pred cCchHHHHHHHHHhcCCCCcEEEE-eCCchh-hhhhccccCCCCCccEEEecc------CCCchhhHHHHhcCccccCCC
Q 021218 187 SDAAQADNYEKIFSCMKPNSILGL-SHGFLL-GHLQSMGLDFPKNIGVIAVCP------KGMGPSVRRLYVQGKEINGAG 258 (316)
Q Consensus 187 p~~~~~~vi~ei~~~mk~gaiLid-~aGv~l-~~l~~~~~~~~~~i~vI~vhP------n~pg~~~r~lf~~G~e~~G~G 258 (316)
|++...++++++.++++++++|++ ..|+.. ..+.+ .+++ ++..++ .+| .. . ..+.|
T Consensus 72 ~~~~~~~v~~~l~~~l~~~~~vv~~~~g~~~~~~l~~---~~~~---~~~g~~~~~~~~~~p-~~-~--------~~~~g 135 (291)
T 1ks9_A 72 KAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQN---IQQP---LLMGTTTHAARRDGN-VI-I--------HVANG 135 (291)
T ss_dssp CGGGHHHHHHHHHTTSCTTSCEEEECSSSCTTGGGTT---CCSC---EEEEEECCEEEEETT-EE-E--------EEECC
T ss_pred cHHhHHHHHHHHHhhCCCCCEEEEecCCCCcHHHHHH---hcCC---eEEEEEeEccEEcCC-EE-E--------Eeccc
Confidence 999988899999999999998775 566643 24443 3443 333322 122 11 0 01245
Q ss_pred ceEEEeeccCCCHHHHHHHHHHHHHcCCCCeee
Q 021218 259 INSSFAVHQDVDGRATNVALGWSVALGSPFTFA 291 (316)
Q Consensus 259 ~~~iiap~~d~~~~a~e~a~~l~~alG~~~~~~ 291 (316)
... +.+.. .+.+..+.++.+++.+|.+....
T Consensus 136 ~~~-i~~~~-~~~~~~~~~~~ll~~~g~~~~~~ 166 (291)
T 1ks9_A 136 ITH-IGPAR-QQDGDYSYLADILQTVLPDVAWH 166 (291)
T ss_dssp CEE-EEESS-GGGTTCTHHHHHHHTTSSCEEEC
T ss_pred ceE-EccCC-CCcchHHHHHHHHHhcCCCCeec
Confidence 533 55533 23566778889999999654333
No 106
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.00 E-value=6.9e-09 Score=99.02 Aligned_cols=153 Identities=12% Similarity=0.119 Sum_probs=116.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHH-----------HHHHCCceecC----------CCcC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFA-----------EARAAGFTEEN----------GTLG 170 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~-----------~A~~~G~~~~~----------~t~~ 170 (316)
.+|+|||.|.||..+|..+... |++|++.+...+ ..+ ...+.|..... ..+.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~------G~~V~l~D~~~~-~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~ 79 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIEPR-QITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCT 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSCHH-HHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEEC
T ss_pred CeEEEECCcHHHHHHHHHHHhC------CCeEEEEECCHH-HHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccccc
Confidence 7999999999999999999998 999888765432 221 12223322100 0145
Q ss_pred CHHhhhccCCEEEEcccCchHHH--HHHHHHhcCCCCcEEE-EeCCchhhhhhccccCCCCCccEEEeccCCCchhhHHH
Q 021218 171 DIYETISGSDLVLLLISDAAQAD--NYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRL 247 (316)
Q Consensus 171 ~~~e~i~~ADIViLavp~~~~~~--vi~ei~~~mk~gaiLi-d~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~l 247 (316)
++.|++++||+|+=++|-+-..+ ++.++-+.++++++|. .++++.+..+.+ .....-+|+..||=-|.+.|
T Consensus 80 ~l~~a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~---~~~~p~r~ig~HffNP~~~m--- 153 (319)
T 3ado_A 80 NLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFT---GLAHVKQCIVAHPVNPPYYI--- 153 (319)
T ss_dssp CHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHT---TCTTGGGEEEEEECSSTTTC---
T ss_pred chHhHhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhh---hccCCCcEEEecCCCCcccc---
Confidence 78889999999999999888754 9999999999999986 788888887775 33334579999997777664
Q ss_pred HhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCCC
Q 021218 248 YVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPF 288 (316)
Q Consensus 248 f~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~~ 288 (316)
--.=|.++..++++.++.+.++.+.+|.+-
T Consensus 154 -----------~LVEiv~g~~Ts~~~~~~~~~~~~~~gk~p 183 (319)
T 3ado_A 154 -----------PLVELVPHPETSPATVDRTHALMRKIGQSP 183 (319)
T ss_dssp -----------CEEEEEECTTCCHHHHHHHHHHHHHTTCEE
T ss_pred -----------chHHhcCCCCCcHHHHHHHHHHHHHhCCcc
Confidence 112278899999999999999999999543
No 107
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=98.99 E-value=2.8e-09 Score=100.02 Aligned_cols=154 Identities=20% Similarity=0.166 Sum_probs=102.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecC---C--------CcCCHHhhhccCC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN---G--------TLGDIYETISGSD 180 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~---~--------t~~~~~e~i~~AD 180 (316)
|+|+|||.|.||.++|..|.+. |.+|.+..|.. .+..++.|+...+ + ...+.+++.+.+|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~---~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~D 73 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT------GHCVSVVSRSD---YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPD 73 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT------TCEEEEECSTT---HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCS
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCh---HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCC
Confidence 7999999999999999999998 99988887753 2444555643211 0 1235666666999
Q ss_pred EEEEcccCchHHHHHHHHHhcCCCCcEEE-EeCCch-hhhhhccccCCCCCccEEEecc------CCCchhhHHHHhcCc
Q 021218 181 LVLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFL-LGHLQSMGLDFPKNIGVIAVCP------KGMGPSVRRLYVQGK 252 (316)
Q Consensus 181 IViLavp~~~~~~vi~ei~~~mk~gaiLi-d~aGv~-l~~l~~~~~~~~~~i~vI~vhP------n~pg~~~r~lf~~G~ 252 (316)
+||+++|.....++++++.++++++++|+ ...|+. ...+++ .+|.+ .++.+.. ..|+... .+
T Consensus 74 lVilavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~---~~~~~-~vl~g~~~~~a~~~~pg~v~-----~~- 143 (320)
T 3i83_A 74 CTLLCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIEPEVAA---AFPDN-EVISGLAFIGVTRTAPGEIW-----HQ- 143 (320)
T ss_dssp EEEECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSCSHHHHH---HSTTS-CEEEEEEEEEEEEEETTEEE-----EE-
T ss_pred EEEEecCCCChHHHHHHHHhhcCCCCEEEEeCCCCChHHHHHH---HCCCC-cEEEEEEEeceEEcCCCEEE-----EC-
Confidence 99999999999999999999999988765 677885 445554 44543 4544322 1223221 11
Q ss_pred cccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCCC
Q 021218 253 EINGAGINSSFAVHQDVDGRATNVALGWSVALGSPF 288 (316)
Q Consensus 253 e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~~ 288 (316)
|.|. ..|......+.+..+.+.+++...|.+.
T Consensus 144 ---~~~~-~~ig~~~~~~~~~~~~l~~~l~~~~~~~ 175 (320)
T 3i83_A 144 ---AYGR-LMLGNYPGGVSERVKTLAAAFEEAGIDG 175 (320)
T ss_dssp ---EEEE-EEEEESSSCCCHHHHHHHHHHHHTTSCE
T ss_pred ---CCCE-EEEecCCCCccHHHHHHHHHHHhCCCCc
Confidence 1222 2344433344466677778888888654
No 108
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.98 E-value=6.3e-09 Score=102.10 Aligned_cols=159 Identities=13% Similarity=0.139 Sum_probs=100.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH-------------------CC-ceecCCCcCC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-------------------AG-FTEENGTLGD 171 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~-------------------~G-~~~~~~t~~~ 171 (316)
|+|+|||+|.||.++|..|.+. |++|++.+++ ++..+...+ .| +.. ..+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~------G~~V~~~d~~-~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~----t~~ 69 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR------GHEVIGVDVS-STKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG----TTD 69 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE----ESC
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCEEEEEECC-HHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE----eCC
Confidence 5899999999999999999998 9987666544 333333322 23 221 357
Q ss_pred HHhhhccCCEEEEcccCch----------HHHHHHHHHhcCCC---CcEEEEeCCchhh----h----hhcc-ccCCCCC
Q 021218 172 IYETISGSDLVLLLISDAA----------QADNYEKIFSCMKP---NSILGLSHGFLLG----H----LQSM-GLDFPKN 229 (316)
Q Consensus 172 ~~e~i~~ADIViLavp~~~----------~~~vi~ei~~~mk~---gaiLid~aGv~l~----~----l~~~-~~~~~~~ 229 (316)
.++++++||+||+|+|... ..++++++.+++++ +++|++.+++... . ++.. +.....+
T Consensus 70 ~~~~~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~ 149 (436)
T 1mv8_A 70 FKKAVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVD 149 (436)
T ss_dssp HHHHHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTT
T ss_pred HHHHhccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCc
Confidence 7788999999999998665 66788899999999 9998876554321 1 2210 1111112
Q ss_pred ccEEEeccCC--CchhhHHHHhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCCCeeecCh
Q 021218 230 IGVIAVCPKG--MGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTL 294 (316)
Q Consensus 230 i~vI~vhPn~--pg~~~r~lf~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~~~~~tT~ 294 (316)
. .+...|.. ++..+.+++... ..++.. .++++.+.+.++++.+|.+ ++.+++
T Consensus 150 ~-~v~~~Pe~~~~G~~~~~~~~~~--------~iv~G~---~~~~~~~~~~~l~~~~~~~-v~~~~~ 203 (436)
T 1mv8_A 150 F-GVGTNPEFLRESTAIKDYDFPP--------MTVIGE---LDKQTGDLLEEIYRELDAP-IIRKTV 203 (436)
T ss_dssp B-EEEECCCCCCTTSHHHHHHSCS--------CEEEEE---SSHHHHHHHHHHHTTSSSC-EEEEEH
T ss_pred E-EEEECcccccccccchhccCCC--------EEEEEc---CCHHHHHHHHHHHhccCCC-EEcCCH
Confidence 2 34456633 333333333221 132333 2578889999999999964 444544
No 109
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.97 E-value=3.4e-10 Score=113.56 Aligned_cols=112 Identities=16% Similarity=0.190 Sum_probs=84.5
Q ss_pred cccchhhHHhhcCCccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCcee
Q 021218 85 SLADRDEYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE 164 (316)
Q Consensus 85 ~l~~~~e~vv~~G~w~F~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~ 164 (316)
++.++.+.+ ++| |.-. ...++.| ++|||||+|.||.++|+.++.+ |++|++.++.. .....+...|+.
T Consensus 235 ~~~~~~~~l-~~g-w~r~-~~~~l~G-ktVgIIG~G~IG~~vA~~l~~~------G~~Viv~d~~~-~~~~~a~~~g~~- 302 (479)
T 1v8b_A 235 NVYGCRHSL-PDG-LMRA-TDFLISG-KIVVICGYGDVGKGCASSMKGL------GARVYITEIDP-ICAIQAVMEGFN- 302 (479)
T ss_dssp HHHHHHHHH-HHH-HHHH-HCCCCTT-SEEEEECCSHHHHHHHHHHHHH------TCEEEEECSCH-HHHHHHHTTTCE-
T ss_pred chHhHHHHH-hhh-hhhc-cccccCC-CEEEEEeeCHHHHHHHHHHHhC------cCEEEEEeCCh-hhHHHHHHcCCE-
Confidence 355666665 666 8421 1358999 9999999999999999999999 99987776553 222345667776
Q ss_pred cCCCcCCHHhhhccCCEEEEcccCchHHHHHH-HHHhcCCCCcEEEEeCCch
Q 021218 165 ENGTLGDIYETISGSDLVLLLISDAAQADNYE-KIFSCMKPNSILGLSHGFL 215 (316)
Q Consensus 165 ~~~t~~~~~e~i~~ADIViLavp~~~~~~vi~-ei~~~mk~gaiLid~aGv~ 215 (316)
..++++++++||+|++|+. ...++. +.++.||+|++|++++-..
T Consensus 303 ----~~~l~ell~~aDiVi~~~~---t~~lI~~~~l~~MK~gailiNvgrg~ 347 (479)
T 1v8b_A 303 ----VVTLDEIVDKGDFFITCTG---NVDVIKLEHLLKMKNNAVVGNIGHFD 347 (479)
T ss_dssp ----ECCHHHHTTTCSEEEECCS---SSSSBCHHHHTTCCTTCEEEECSSTT
T ss_pred ----ecCHHHHHhcCCEEEECCC---hhhhcCHHHHhhcCCCcEEEEeCCCC
Confidence 3589999999999999962 234554 7888999999999886443
No 110
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.93 E-value=4.3e-09 Score=98.61 Aligned_cols=95 Identities=20% Similarity=0.219 Sum_probs=73.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC-CceecC----------CCcCCHHhhhccCC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEEN----------GTLGDIYETISGSD 180 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~-G~~~~~----------~t~~~~~e~i~~AD 180 (316)
|+|+|||.|.||..+|..|.+. |++|.+.+++. +..+...+. +....+ ....+.+++++++|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~------g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 77 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK------GQSVLAWDIDA-QRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDAD 77 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH-HHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCS
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCH-HHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCC
Confidence 7999999999999999999998 98887666543 333333333 331100 01357788889999
Q ss_pred EEEEcccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 181 IViLavp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
+|++++|.....++++++.++++++++|++..|
T Consensus 78 ~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 78 VILIVVPAIHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp EEEECSCGGGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred EEEEeCCchHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 999999999998899999999999998887766
No 111
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.93 E-value=2.7e-09 Score=99.30 Aligned_cols=95 Identities=17% Similarity=0.247 Sum_probs=73.1
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEE
Q 021218 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (316)
Q Consensus 105 ~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViL 184 (316)
..+++| ++|+|||+|.||.++|+.++.+ |++|++.++... ..+.+.+.|.... ...+++++++++|+|++
T Consensus 150 ~~~l~g-~~v~IiG~G~iG~~~a~~l~~~------G~~V~~~dr~~~-~~~~~~~~g~~~~--~~~~l~~~l~~aDvVi~ 219 (293)
T 3d4o_A 150 DFTIHG-ANVAVLGLGRVGMSVARKFAAL------GAKVKVGARESD-LLARIAEMGMEPF--HISKAAQELRDVDVCIN 219 (293)
T ss_dssp SSCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSHH-HHHHHHHTTSEEE--EGGGHHHHTTTCSEEEE
T ss_pred CCCCCC-CEEEEEeeCHHHHHHHHHHHhC------CCEEEEEECCHH-HHHHHHHCCCeec--ChhhHHHHhcCCCEEEE
Confidence 358899 9999999999999999999999 998887776533 3334456675420 02367889999999999
Q ss_pred cccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 185 avp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
|+|+.... ++.++.||++++|++++
T Consensus 220 ~~p~~~i~---~~~l~~mk~~~~lin~a 244 (293)
T 3d4o_A 220 TIPALVVT---ANVLAEMPSHTFVIDLA 244 (293)
T ss_dssp CCSSCCBC---HHHHHHSCTTCEEEECS
T ss_pred CCChHHhC---HHHHHhcCCCCEEEEec
Confidence 99985432 24567899999999886
No 112
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.92 E-value=1.8e-09 Score=100.70 Aligned_cols=95 Identities=21% Similarity=0.338 Sum_probs=73.4
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEE
Q 021218 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (316)
Q Consensus 105 ~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViL 184 (316)
..+++| ++|+|||+|.||.++|+.++.+ |++|++.++..+ ..+.+.+.|+... ...++++++++||+|++
T Consensus 152 ~~~l~g-~~v~IiG~G~iG~~~a~~l~~~------G~~V~~~d~~~~-~~~~~~~~g~~~~--~~~~l~~~l~~aDvVi~ 221 (300)
T 2rir_A 152 DYTIHG-SQVAVLGLGRTGMTIARTFAAL------GANVKVGARSSA-HLARITEMGLVPF--HTDELKEHVKDIDICIN 221 (300)
T ss_dssp SSCSTT-SEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSHH-HHHHHHHTTCEEE--EGGGHHHHSTTCSEEEE
T ss_pred CCCCCC-CEEEEEcccHHHHHHHHHHHHC------CCEEEEEECCHH-HHHHHHHCCCeEE--chhhHHHHhhCCCEEEE
Confidence 468999 9999999999999999999999 998887776543 2333445665410 02468889999999999
Q ss_pred cccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 185 avp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
|+|+.... ++.++.||++++|++++
T Consensus 222 ~~p~~~i~---~~~~~~mk~g~~lin~a 246 (300)
T 2rir_A 222 TIPSMILN---QTVLSSMTPKTLILDLA 246 (300)
T ss_dssp CCSSCCBC---HHHHTTSCTTCEEEECS
T ss_pred CCChhhhC---HHHHHhCCCCCEEEEEe
Confidence 99984322 25678899999999876
No 113
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.91 E-value=5e-09 Score=103.86 Aligned_cols=165 Identities=14% Similarity=0.087 Sum_probs=101.1
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHH---------------HH----CCceecCCCcCC
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA---------------RA----AGFTEENGTLGD 171 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A---------------~~----~G~~~~~~t~~~ 171 (316)
||+|+|||+|.||.++|..|.+. |.|++|++.+++ ++..+.. .+ .++.. ..+
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~----g~G~~V~~~d~~-~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~----t~~ 75 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHM----CPEIRVTVVDVN-ESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF----STN 75 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHH----CTTSEEEEECSC-HHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE----ESC
T ss_pred ccEEEEECCCHHHHHHHHHHHhc----CCCCEEEEEECC-HHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE----ECC
Confidence 47999999999999999999876 334777666554 3322221 11 23321 357
Q ss_pred HHhhhccCCEEEEcccCch---------------HHHHHHHHHhcCCCCcEEEEeCCchhh-------hhhccccCCCCC
Q 021218 172 IYETISGSDLVLLLISDAA---------------QADNYEKIFSCMKPNSILGLSHGFLLG-------HLQSMGLDFPKN 229 (316)
Q Consensus 172 ~~e~i~~ADIViLavp~~~---------------~~~vi~ei~~~mk~gaiLid~aGv~l~-------~l~~~~~~~~~~ 229 (316)
..+++++||+||+|+|... ..++++++.++++++++|++.+.+... .++. .....
T Consensus 76 ~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~---~~~~~ 152 (467)
T 2q3e_A 76 IDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDA---NTKPN 152 (467)
T ss_dssp HHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHH---TCCTT
T ss_pred HHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHH---hCCCC
Confidence 7888999999999997544 235667888999999999887654311 2222 11112
Q ss_pred cc-EEEeccCC--CchhhHHHHhcCccccCCCceEEEe-eccCCCHHHHHHHHHHHHHc-CCCCeeecChh
Q 021218 230 IG-VIAVCPKG--MGPSVRRLYVQGKEINGAGINSSFA-VHQDVDGRATNVALGWSVAL-GSPFTFATTLE 295 (316)
Q Consensus 230 i~-vI~vhPn~--pg~~~r~lf~~G~e~~G~G~~~iia-p~~d~~~~a~e~a~~l~~al-G~~~~~~tT~~ 295 (316)
++ .|...|.. ++....+++... ..++. +....++++.+.++.+++.+ |...+..++..
T Consensus 153 ~d~~V~~~Pe~~~~G~~~~d~~~~~--------rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~ 215 (467)
T 2q3e_A 153 LNLQVLSNPEFLAEGTAIKDLKNPD--------RVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTW 215 (467)
T ss_dssp CEEEEEECCCCCCTTSHHHHHHSCS--------CEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHH
T ss_pred CCeEEEeCHHHhhcccchhhccCCC--------EEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHH
Confidence 33 34566643 344333333321 13233 22224678899999999999 65555555543
No 114
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.88 E-value=1.5e-09 Score=109.26 Aligned_cols=110 Identities=19% Similarity=0.153 Sum_probs=81.6
Q ss_pred ccchhhHHhhcCCccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec
Q 021218 86 LADRDEYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE 165 (316)
Q Consensus 86 l~~~~e~vv~~G~w~F~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~ 165 (316)
+.+..+.+ ++| |.-. ...++.| +++||||+|.||.++|+.++.+ |++|++.++... ....+...|+.
T Consensus 256 ~~~~~~~l-~~g-w~~~-~g~~L~G-ktVgIIG~G~IG~~vA~~l~~~------G~~V~v~d~~~~-~~~~a~~~G~~-- 322 (494)
T 3d64_A 256 LYGCRESL-VDG-IKRA-TDVMIAG-KIAVVAGYGDVGKGCAQSLRGL------GATVWVTEIDPI-CALQAAMEGYR-- 322 (494)
T ss_dssp HHHHHTTH-HHH-HHHH-HCCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSCHH-HHHHHHTTTCE--
T ss_pred hHhhhhhh-hhh-hhhc-cccccCC-CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCChH-hHHHHHHcCCE--
Confidence 34455554 455 7321 1357999 9999999999999999999999 999887766532 22244556776
Q ss_pred CCCcCCHHhhhccCCEEEEcccCchHHHHHH-HHHhcCCCCcEEEEeCCc
Q 021218 166 NGTLGDIYETISGSDLVLLLISDAAQADNYE-KIFSCMKPNSILGLSHGF 214 (316)
Q Consensus 166 ~~t~~~~~e~i~~ADIViLavp~~~~~~vi~-ei~~~mk~gaiLid~aGv 214 (316)
..++++++++||+|++++. ...++. +.++.||+|++|++++-.
T Consensus 323 ---~~~l~ell~~aDiVi~~~~---t~~lI~~~~l~~MK~gAilINvgrg 366 (494)
T 3d64_A 323 ---VVTMEYAADKADIFVTATG---NYHVINHDHMKAMRHNAIVCNIGHF 366 (494)
T ss_dssp ---ECCHHHHTTTCSEEEECSS---SSCSBCHHHHHHCCTTEEEEECSSS
T ss_pred ---eCCHHHHHhcCCEEEECCC---cccccCHHHHhhCCCCcEEEEcCCC
Confidence 3489999999999999983 233554 788899999999987643
No 115
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=98.88 E-value=8.5e-09 Score=97.36 Aligned_cols=94 Identities=17% Similarity=0.235 Sum_probs=73.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCC---------CcCCHHhhhccCCEE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG---------TLGDIYETISGSDLV 182 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~---------t~~~~~e~i~~ADIV 182 (316)
|+|+|||.|.||.++|..|.+. |++|.+..|. +..+...+.|...... ...+.++ ++++|+|
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~------g~~V~~~~r~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~V 74 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA------GEAINVLARG--ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVV 74 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT------TCCEEEECCH--HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCEEEEEECh--HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEE
Confidence 7999999999999999999998 8888877764 3455566677643110 1235555 5899999
Q ss_pred EEcccCchHHHHHHHHHhcCCCCcEEE-EeCCc
Q 021218 183 LLLISDAAQADNYEKIFSCMKPNSILG-LSHGF 214 (316)
Q Consensus 183 iLavp~~~~~~vi~ei~~~mk~gaiLi-d~aGv 214 (316)
|+++|.....++++++.++++++++|+ ...|+
T Consensus 75 ilavk~~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 75 IVAVKAPALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp EECCCHHHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred EEeCCchhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 999999888889999999999998776 56785
No 116
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=98.87 E-value=1.1e-08 Score=96.24 Aligned_cols=105 Identities=19% Similarity=0.269 Sum_probs=76.2
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCC---------CcCCHHhhhc
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG---------TLGDIYETIS 177 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~---------t~~~~~e~i~ 177 (316)
++.. ++|+|||.|+||.++|..|.+. |++|.+. ++ ++..+...+.|...... ...+.+ .++
T Consensus 16 ~~~~-~kI~IiGaGa~G~~~a~~L~~~------G~~V~l~-~~-~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~-~~~ 85 (318)
T 3hwr_A 16 YFQG-MKVAIMGAGAVGCYYGGMLARA------GHEVILI-AR-PQHVQAIEATGLRLETQSFDEQVKVSASSDPS-AVQ 85 (318)
T ss_dssp -----CEEEEESCSHHHHHHHHHHHHT------TCEEEEE-CC-HHHHHHHHHHCEEEECSSCEEEECCEEESCGG-GGT
T ss_pred hccC-CcEEEECcCHHHHHHHHHHHHC------CCeEEEE-Ec-HhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHH-HcC
Confidence 3344 9999999999999999999998 9888777 54 34445555556432100 023444 468
Q ss_pred cCCEEEEcccCchHHHHHHHHHhcCCCCcEEE-EeCCchh-hhhhc
Q 021218 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFLL-GHLQS 221 (316)
Q Consensus 178 ~ADIViLavp~~~~~~vi~ei~~~mk~gaiLi-d~aGv~l-~~l~~ 221 (316)
++|+||+++|.....++++++.++++++++|+ ...|+.. ..+.+
T Consensus 86 ~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~ 131 (318)
T 3hwr_A 86 GADLVLFCVKSTDTQSAALAMKPALAKSALVLSLQNGVENADTLRS 131 (318)
T ss_dssp TCSEEEECCCGGGHHHHHHHHTTTSCTTCEEEEECSSSSHHHHHHH
T ss_pred CCCEEEEEcccccHHHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHH
Confidence 99999999999988889999999999998766 6788865 34444
No 117
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.86 E-value=7.7e-09 Score=102.50 Aligned_cols=162 Identities=14% Similarity=0.088 Sum_probs=101.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH-------------------CCceecCCCcCCH
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-------------------AGFTEENGTLGDI 172 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~-------------------~G~~~~~~t~~~~ 172 (316)
|+|+|||+|.||.++|..|.+. |++|++.+++ ++..+...+ .|... ...+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~------G~~V~~~D~~-~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~---~t~d~ 72 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL------GANVRCIDTD-RNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLR---FGTEI 72 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEE---EESCH
T ss_pred CEEEEECcCHHHHHHHHHHHhc------CCEEEEEECC-HHHHHHHHcCCCcccCCCHHHHHHhhcccCcEE---EECCH
Confidence 7999999999999999999999 9988766554 333333222 12111 13578
Q ss_pred HhhhccCCEEEEcccCc----------hHHHHHHHHHhcCCCCcEEEEeCCchhh-------hhhccccCCCCCcc-EEE
Q 021218 173 YETISGSDLVLLLISDA----------AQADNYEKIFSCMKPNSILGLSHGFLLG-------HLQSMGLDFPKNIG-VIA 234 (316)
Q Consensus 173 ~e~i~~ADIViLavp~~----------~~~~vi~ei~~~mk~gaiLid~aGv~l~-------~l~~~~~~~~~~i~-vI~ 234 (316)
.+++++||+||+|+|.. ...++++++.++++++++|++.+++... .+++.+.....+.+ .+.
T Consensus 73 ~ea~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~~v~ 152 (450)
T 3gg2_A 73 EQAVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDFDIA 152 (450)
T ss_dssp HHHGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred HHHHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcceeEE
Confidence 88999999999999977 5667889999999999999988765311 12211101111122 355
Q ss_pred eccCCCc--hhhHHHHhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCC--CeeecCh
Q 021218 235 VCPKGMG--PSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP--FTFATTL 294 (316)
Q Consensus 235 vhPn~pg--~~~r~lf~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~--~~~~tT~ 294 (316)
..|.... ..+.+...- +.++.-. .++++.+.++.+++.++.. .+..+++
T Consensus 153 ~~Pe~a~eG~~~~~~~~p---------~~ivvG~--~~~~~~~~~~~l~~~~~~~~~~~~~~d~ 205 (450)
T 3gg2_A 153 SNPEFLKEGNAIDDFMKP---------DRVVVGV--DSDRARELITSLYKPMLLNNFRVLFMDI 205 (450)
T ss_dssp ECCCCCCTTSHHHHHHSC---------SCEEEEE--SSHHHHHHHHHHHTTTCCSCCCEEEECH
T ss_pred echhhhcccchhhhccCC---------CEEEEEc--CCHHHHHHHHHHHHHHhcCCCeEEecCH
Confidence 6674322 222111111 1222221 2468899999999998863 3444443
No 118
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.84 E-value=8.1e-09 Score=102.98 Aligned_cols=164 Identities=13% Similarity=0.086 Sum_probs=98.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC-------------------CceecCCCcCCH
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-------------------GFTEENGTLGDI 172 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~-------------------G~~~~~~t~~~~ 172 (316)
|+|+|||+|.||.++|..|.+. |.|++|++.+++ ++..+...+. ++. ...+.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~----g~g~~V~~~D~~-~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~----~t~~~ 80 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHK----CPHITVTVVDMN-TAKIAEWNSDKLPIYEPGLDEIVFAARGRNLF----FSSDI 80 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHH----CTTSEEEEECSC-HHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEE----EESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhc----CCCCEEEEEECC-HHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEE----EECCH
Confidence 7999999999999999999876 234677665543 3333322211 111 12466
Q ss_pred HhhhccCCEEEEcccCch---------------HHHHHHHHHhcCCCCcEEEEeCCchhh---h----hhc-cccCCCCC
Q 021218 173 YETISGSDLVLLLISDAA---------------QADNYEKIFSCMKPNSILGLSHGFLLG---H----LQS-MGLDFPKN 229 (316)
Q Consensus 173 ~e~i~~ADIViLavp~~~---------------~~~vi~ei~~~mk~gaiLid~aGv~l~---~----l~~-~~~~~~~~ 229 (316)
.+++++||+||+|+|... ..++++++.++++++++|++.+++... . +++ .+.. .+
T Consensus 81 ~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~--~~ 158 (481)
T 2o3j_A 81 PKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNN--EN 158 (481)
T ss_dssp HHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC------
T ss_pred HHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcC--cC
Confidence 788899999999987542 455778899999999999987654311 1 211 1100 12
Q ss_pred cc-EEEeccCC--CchhhHHHHhcCccccCCCceEEEeec-cCCCHHHHHHHHHHHHHcCC-CCeeecCh
Q 021218 230 IG-VIAVCPKG--MGPSVRRLYVQGKEINGAGINSSFAVH-QDVDGRATNVALGWSVALGS-PFTFATTL 294 (316)
Q Consensus 230 i~-vI~vhPn~--pg~~~r~lf~~G~e~~G~G~~~iiap~-~d~~~~a~e~a~~l~~alG~-~~~~~tT~ 294 (316)
++ .|..+|.. ++....+++... ..++... ...++++.+.++.+++.+|. ..+..+++
T Consensus 159 ~d~~v~~~Pe~~~~G~a~~~~~~~~--------~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~ 220 (481)
T 2o3j_A 159 LKFQVLSNPEFLAEGTAMKDLANPD--------RVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNT 220 (481)
T ss_dssp CCEEEEECCCCCCTTCHHHHHHSCS--------CEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEH
T ss_pred CceEEEeCcccccccchhhcccCCC--------EEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCH
Confidence 33 36778843 344333333321 2323222 22224678889999999995 34444433
No 119
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.79 E-value=7e-09 Score=102.85 Aligned_cols=93 Identities=16% Similarity=0.177 Sum_probs=74.3
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEE
Q 021218 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (316)
Q Consensus 105 ~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViL 184 (316)
..+|.| ++|+|||+|.||.++|+.|+.+ |++|++.++. +.....+...|+. ..+++|++++||+|++
T Consensus 206 g~~L~G-ktVgIiG~G~IG~~vA~~Lka~------Ga~Viv~D~~-p~~a~~A~~~G~~-----~~sL~eal~~ADVVil 272 (436)
T 3h9u_A 206 DVMIAG-KTACVCGYGDVGKGCAAALRGF------GARVVVTEVD-PINALQAAMEGYQ-----VLLVEDVVEEAHIFVT 272 (436)
T ss_dssp CCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCHHHHTTTCSEEEE
T ss_pred CCcccC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCC-hhhhHHHHHhCCe-----ecCHHHHHhhCCEEEE
Confidence 367889 9999999999999999999999 9998776554 3334456778876 3589999999999998
Q ss_pred cccCchHHHHHH-HHHhcCCCCcEEEEeCC
Q 021218 185 LISDAAQADNYE-KIFSCMKPNSILGLSHG 213 (316)
Q Consensus 185 avp~~~~~~vi~-ei~~~mk~gaiLid~aG 213 (316)
+..... +++ +.++.||+|++|++++-
T Consensus 273 t~gt~~---iI~~e~l~~MK~gAIVINvgR 299 (436)
T 3h9u_A 273 TTGNDD---IITSEHFPRMRDDAIVCNIGH 299 (436)
T ss_dssp CSSCSC---SBCTTTGGGCCTTEEEEECSS
T ss_pred CCCCcC---ccCHHHHhhcCCCcEEEEeCC
Confidence 654322 454 67889999999998763
No 120
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.78 E-value=1.3e-08 Score=101.49 Aligned_cols=93 Identities=25% Similarity=0.274 Sum_probs=74.8
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEc
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLa 185 (316)
..|.| ++++|||+|.+|..+|+.++.+ |++|++.++.. .....+...|+. ..+++|++++||+|+++
T Consensus 243 ~~L~G-KTVgVIG~G~IGr~vA~~lraf------Ga~Viv~d~dp-~~a~~A~~~G~~-----vv~LeElL~~ADIVv~a 309 (464)
T 3n58_A 243 VMMAG-KVAVVCGYGDVGKGSAQSLAGA------GARVKVTEVDP-ICALQAAMDGFE-----VVTLDDAASTADIVVTT 309 (464)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSH-HHHHHHHHTTCE-----ECCHHHHGGGCSEEEEC
T ss_pred CcccC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEEeCCc-chhhHHHhcCce-----eccHHHHHhhCCEEEEC
Confidence 57899 9999999999999999999999 99988776543 333456667876 34899999999999998
Q ss_pred ccCchHHHHHH-HHHhcCCCCcEEEEeCCc
Q 021218 186 ISDAAQADNYE-KIFSCMKPNSILGLSHGF 214 (316)
Q Consensus 186 vp~~~~~~vi~-ei~~~mk~gaiLid~aGv 214 (316)
+.. ..++. +.++.||+|++|+.++-+
T Consensus 310 tgt---~~lI~~e~l~~MK~GAILINvGRg 336 (464)
T 3n58_A 310 TGN---KDVITIDHMRKMKDMCIVGNIGHF 336 (464)
T ss_dssp CSS---SSSBCHHHHHHSCTTEEEEECSSS
T ss_pred CCC---ccccCHHHHhcCCCCeEEEEcCCC
Confidence 643 23564 788899999999987644
No 121
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.75 E-value=4e-09 Score=97.48 Aligned_cols=94 Identities=14% Similarity=0.099 Sum_probs=71.8
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcc
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLav 186 (316)
+++| ++|+|||.|.||.++++.|.+. |.+|.+.+|+.++..+.+.+.|+.. ..+..++++++|+||+++
T Consensus 126 ~~~~-~~v~iiGaG~~g~aia~~L~~~------g~~V~v~~r~~~~~~~l~~~~g~~~----~~~~~~~~~~aDiVi~at 194 (275)
T 2hk9_A 126 EVKE-KSILVLGAGGASRAVIYALVKE------GAKVFLWNRTKEKAIKLAQKFPLEV----VNSPEEVIDKVQVIVNTT 194 (275)
T ss_dssp TGGG-SEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSHHHHHHHTTTSCEEE----CSCGGGTGGGCSEEEECS
T ss_pred CcCC-CEEEEECchHHHHHHHHHHHHc------CCEEEEEECCHHHHHHHHHHcCCee----ehhHHhhhcCCCEEEEeC
Confidence 6789 9999999999999999999998 8888777766443334444456542 336778899999999999
Q ss_pred cCchHHH---HHHHHHhcCCCCcEEEEeCC
Q 021218 187 SDAAQAD---NYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 187 p~~~~~~---vi~ei~~~mk~gaiLid~aG 213 (316)
|+....+ .++ .+.++++++|+|+..
T Consensus 195 p~~~~~~~~~~i~--~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 195 SVGLKDEDPEIFN--YDLIKKDHVVVDIIY 222 (275)
T ss_dssp STTSSTTCCCSSC--GGGCCTTSEEEESSS
T ss_pred CCCCCCCCCCCCC--HHHcCCCCEEEEcCC
Confidence 9986432 222 356899999998876
No 122
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.73 E-value=1.7e-08 Score=97.18 Aligned_cols=95 Identities=18% Similarity=0.226 Sum_probs=69.9
Q ss_pred CCEEEEEcccchHHHHHHHHHh-hhhhhcCCcEEEEEec--CCcccHHHH-HHCCcee----cCC-----------CcCC
Q 021218 111 INQIGVIGWGSQGPAQAQNLRD-SLAEAKSDIVVKVGLR--KGSRSFAEA-RAAGFTE----ENG-----------TLGD 171 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~-~~~~~g~G~~Vivg~r--~~~~s~~~A-~~~G~~~----~~~-----------t~~~ 171 (316)
||+|+|||.|.||.++|..|.+ . |++|.+..+ ++++..+.+ .+.|... .++ ...+
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~------G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRD------GVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKD 75 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTST------TEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESC
T ss_pred CceEEEECCCHHHHHHHHHHHhCC------CCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCC
Confidence 3799999999999999999966 6 888877762 222333332 2233100 000 1346
Q ss_pred HHhhhccCCEEEEcccCchHHHHHHHHHhcCCCCcEEEEe
Q 021218 172 IYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 172 ~~e~i~~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~ 211 (316)
.+++++++|+||+++|.....++++++.++++++++|+..
T Consensus 76 ~~~a~~~aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 76 PEIAISGADVVILTVPAFAHEGYFQAMAPYVQDSALIVGL 115 (404)
T ss_dssp HHHHHTTCSEEEECSCGGGHHHHHHHHTTTCCTTCEEEET
T ss_pred HHHHhCCCCEEEEeCchHHHHHHHHHHHhhCCCCcEEEEc
Confidence 7788999999999999999999999999999999988764
No 123
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.70 E-value=1.5e-08 Score=100.34 Aligned_cols=92 Identities=23% Similarity=0.269 Sum_probs=73.7
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEc
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLa 185 (316)
..+.| ++++|||+|.||..+|+.++.+ |++|++.+++ +.....+...|+. ..+++++++++|+|++|
T Consensus 216 ~~L~G-ktV~ViG~G~IGk~vA~~Lra~------Ga~Viv~D~d-p~ra~~A~~~G~~-----v~~Leeal~~ADIVi~a 282 (435)
T 3gvp_A 216 MMFGG-KQVVVCGYGEVGKGCCAALKAM------GSIVYVTEID-PICALQACMDGFR-----LVKLNEVIRQVDIVITC 282 (435)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCHHHHTTTCSEEEEC
T ss_pred ceecC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEEeCC-hhhhHHHHHcCCE-----eccHHHHHhcCCEEEEC
Confidence 57899 9999999999999999999999 9998776654 3334456677875 34899999999999996
Q ss_pred ccCchHHHHHH-HHHhcCCCCcEEEEeCC
Q 021218 186 ISDAAQADNYE-KIFSCMKPNSILGLSHG 213 (316)
Q Consensus 186 vp~~~~~~vi~-ei~~~mk~gaiLid~aG 213 (316)
+ ....++. +.++.||+|++|++++-
T Consensus 283 -t--gt~~lI~~e~l~~MK~gailINvgr 308 (435)
T 3gvp_A 283 -T--GNKNVVTREHLDRMKNSCIVCNMGH 308 (435)
T ss_dssp -S--SCSCSBCHHHHHHSCTTEEEEECSS
T ss_pred -C--CCcccCCHHHHHhcCCCcEEEEecC
Confidence 2 2234665 78889999999997753
No 124
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.70 E-value=3.8e-08 Score=97.52 Aligned_cols=96 Identities=11% Similarity=0.097 Sum_probs=68.6
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC------------------CceecCC
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA------------------GFTEENG 167 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~------------------G~~~~~~ 167 (316)
++..- |+|+|||+|.||.++|..|. . |++|++.+++ ++..+...+. ++..
T Consensus 32 r~~~~-mkIaVIGlG~mG~~lA~~La-~------G~~V~~~D~~-~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~--- 99 (432)
T 3pid_A 32 RGSEF-MKITISGTGYVGLSNGVLIA-Q------NHEVVALDIV-QAKVDMLNQKISPIVDKEIQEYLAEKPLNFRA--- 99 (432)
T ss_dssp ---CC-CEEEEECCSHHHHHHHHHHH-T------TSEEEEECSC-HHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE---
T ss_pred cccCC-CEEEEECcCHHHHHHHHHHH-c------CCeEEEEecC-HHHhhHHhccCCccccccHHHHHhhccCCeEE---
Confidence 44444 89999999999999999775 4 7887765554 3333332221 2221
Q ss_pred CcCCHHhhhccCCEEEEcccCc-----------hHHHHHHHHHhcCCCCcEEEEeCCch
Q 021218 168 TLGDIYETISGSDLVLLLISDA-----------AQADNYEKIFSCMKPNSILGLSHGFL 215 (316)
Q Consensus 168 t~~~~~e~i~~ADIViLavp~~-----------~~~~vi~ei~~~mk~gaiLid~aGv~ 215 (316)
..++.+++++||+||+++|.. ....+++.+.+ +++|++|++.+.+.
T Consensus 100 -ttd~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~ 156 (432)
T 3pid_A 100 -TTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIP 156 (432)
T ss_dssp -ESCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCC
T ss_pred -EcCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCC
Confidence 357889999999999999986 23457778888 99999999887664
No 125
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.69 E-value=2.3e-07 Score=90.24 Aligned_cols=94 Identities=13% Similarity=0.067 Sum_probs=66.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCcee-c------------C-CCcCCHHhhhc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE-E------------N-GTLGDIYETIS 177 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~-~------------~-~t~~~~~e~i~ 177 (316)
|+|+|||+|.||..+|..|.+ |++|++.+++ ++..+...+.+... + . ....+..++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-------G~~V~~~d~~-~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~ 72 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-------QNEVTIVDIL-PSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYK 72 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------TSEEEEECSC-HHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhC-------CCEEEEEECC-HHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhc
Confidence 589999999999999998853 6777665544 33343333333210 0 0 01346678889
Q ss_pred cCCEEEEcccCc-----------hHHHHHHHHHhcCCCCcEEEEeCCc
Q 021218 178 GSDLVLLLISDA-----------AQADNYEKIFSCMKPNSILGLSHGF 214 (316)
Q Consensus 178 ~ADIViLavp~~-----------~~~~vi~ei~~~mk~gaiLid~aGv 214 (316)
+||+||+++|.. ...++++++.+ ++++++|++.+.+
T Consensus 73 ~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~ 119 (402)
T 1dlj_A 73 EAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTI 119 (402)
T ss_dssp HCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCC
T ss_pred CCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCC
Confidence 999999999988 35668888988 9999998874433
No 126
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.68 E-value=6.6e-08 Score=95.97 Aligned_cols=153 Identities=14% Similarity=0.125 Sum_probs=95.7
Q ss_pred CCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH-------------------CC-ceecCCCc
Q 021218 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-------------------AG-FTEENGTL 169 (316)
Q Consensus 110 G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~-------------------~G-~~~~~~t~ 169 (316)
|--+|+|||+|.||.++|..|.+. |++|++++++.++ .+...+ .| +. ..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~------G~~V~~~D~~~~k-v~~l~~g~~~~~epgl~~~~~~~~~~g~l~----~t 75 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDF------GHEVVCVDKDARK-IELLHQNVMPIYEPGLDALVASNVKAGRLS----FT 75 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCSTT-HHHHTTTCCSSCCTTHHHHHHHHHHTTCEE----EE
T ss_pred CceEEEEEcCCHHHHHHHHHHHHC------CCEEEEEeCCHHH-HHHHhcCCCCccCCCHHHHHHhhcccCCEE----EE
Confidence 435899999999999999999999 9998777665443 322222 12 12 13
Q ss_pred CCHHhhhccCCEEEEcccCch-----------HHHHHHHHHhcCCCCcEEEEeCCchhh-------hhhccccCCCCCcc
Q 021218 170 GDIYETISGSDLVLLLISDAA-----------QADNYEKIFSCMKPNSILGLSHGFLLG-------HLQSMGLDFPKNIG 231 (316)
Q Consensus 170 ~~~~e~i~~ADIViLavp~~~-----------~~~vi~ei~~~mk~gaiLid~aGv~l~-------~l~~~~~~~~~~i~ 231 (316)
.++.+++++||+||+|+|... ..++++++.++++++++|++.+++... .+.+. ....++
T Consensus 76 td~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~--~~~~d~- 152 (446)
T 4a7p_A 76 TDLAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEV--APNSGA- 152 (446)
T ss_dssp SCHHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHH--STTSCC-
T ss_pred CCHHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHh--CCCCCc-
Confidence 578899999999999976542 556888999999999999988766411 22221 111222
Q ss_pred EEEeccCCCchh--hHHHHhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCC
Q 021218 232 VIAVCPKGMGPS--VRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 232 vI~vhPn~pg~~--~r~lf~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
.|...|...... +.+... .+.++.-. .++++.+.++.+++.++..
T Consensus 153 ~v~~~Pe~a~eG~a~~d~~~---------p~~ivvG~--~~~~~~~~~~~ly~~~~~~ 199 (446)
T 4a7p_A 153 KVVSNPEFLREGAAIEDFKR---------PDRVVVGT--EDEFARQVMREIYRPLSLN 199 (446)
T ss_dssp EEEECCCCCCTTSHHHHHHS---------CSCEEEEC--SCHHHHHHHHHHHCSCC--
T ss_pred eEEeCcccccccchhhhccC---------CCEEEEeC--CcHHHHHHHHHHHHHHhcC
Confidence 355667432211 111111 11222222 2457888888898887754
No 127
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.67 E-value=5.2e-08 Score=97.26 Aligned_cols=98 Identities=16% Similarity=0.088 Sum_probs=72.4
Q ss_pred CCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCcee-cC---------------CCcCCHH
Q 021218 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE-EN---------------GTLGDIY 173 (316)
Q Consensus 110 G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~-~~---------------~t~~~~~ 173 (316)
|-|+|+|||+|.||.++|..|.+. |++|++.+++ ++..+...+.+... +. ....+..
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~------G~~V~~~d~~-~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~ 79 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI------GHDVFCLDVD-QAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIE 79 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhC------CCEEEEEECC-HHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHH
Confidence 448999999999999999999998 9987766554 33333333221000 00 0134677
Q ss_pred hhhccCCEEEEcccC----------chHHHHHHHHHhcCCCCcEEEEeCCc
Q 021218 174 ETISGSDLVLLLISD----------AAQADNYEKIFSCMKPNSILGLSHGF 214 (316)
Q Consensus 174 e~i~~ADIViLavp~----------~~~~~vi~ei~~~mk~gaiLid~aGv 214 (316)
+++++||+||+|+|. +...++++++.++++++++|++.+++
T Consensus 80 ~a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv 130 (478)
T 2y0c_A 80 AAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTV 130 (478)
T ss_dssp HHHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCC
T ss_pred HHhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCc
Confidence 889999999999997 56667889999999999999887775
No 128
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.65 E-value=5.5e-08 Score=81.76 Aligned_cols=110 Identities=7% Similarity=-0.027 Sum_probs=78.2
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEccc
Q 021218 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~----G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp 187 (316)
++|+|||. |.||..++++|++. |++|+..+.+..+ -.|... ..++.|+.+..|++++++|
T Consensus 15 ~~IavIGaS~~~g~~G~~~~~~L~~~------G~~V~~vnp~~~~------i~G~~~----~~s~~el~~~vDlvii~vp 78 (138)
T 1y81_A 15 RKIALVGASKNPAKYGNIILKDLLSK------GFEVLPVNPNYDE------IEGLKC----YRSVRELPKDVDVIVFVVP 78 (138)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT------TCEEEEECTTCSE------ETTEEC----BSSGGGSCTTCCEEEECSC
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHC------CCEEEEeCCCCCe------ECCeee----cCCHHHhCCCCCEEEEEeC
Confidence 89999999 99999999999998 9985544433221 146653 5678888889999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEeCCchhhhhhccccCCCCCccEEEeccCCCchh
Q 021218 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~gaiLid~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~ 243 (316)
+....++++++.+ ...+.++++.+++.-+..+. .-..++.+| .||+++-.
T Consensus 79 ~~~v~~v~~~~~~-~g~~~i~~~~~~~~~~l~~~---a~~~Gi~~i--gpnc~g~~ 128 (138)
T 1y81_A 79 PKVGLQVAKEAVE-AGFKKLWFQPGAESEEIRRF---LEKAGVEYS--FGRCIMVE 128 (138)
T ss_dssp HHHHHHHHHHHHH-TTCCEEEECTTSCCHHHHHH---HHHHTCEEE--CSCCHHHH
T ss_pred HHHHHHHHHHHHH-cCCCEEEEcCccHHHHHHHH---HHHCCCEEE--cCCcceEE
Confidence 8888889988766 55566777777664332221 112356655 48887755
No 129
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=98.63 E-value=9.3e-08 Score=89.49 Aligned_cols=112 Identities=21% Similarity=0.145 Sum_probs=77.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecC-CC-----cCCHHhhhccCCEEEEc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN-GT-----LGDIYETISGSDLVLLL 185 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~-~t-----~~~~~e~i~~ADIViLa 185 (316)
|+|+|||.|+||.++|..|. . |.+|.+..|.. ...+..++.|+.... +. .....+.+..+|+||++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~------g~~V~~~~r~~-~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vila 74 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L------YHDVTVVTRRQ-EQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVT 74 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T------TSEEEEECSCH-HHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHh-c------CCceEEEECCH-HHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEE
Confidence 79999999999999999999 8 88888777653 333444556765321 00 00013457889999999
Q ss_pred ccCchHHHHHHHHHhcCCCCcEEEEeCCchhh-hhhccccCCCCCccEEEec
Q 021218 186 ISDAAQADNYEKIFSCMKPNSILGLSHGFLLG-HLQSMGLDFPKNIGVIAVC 236 (316)
Q Consensus 186 vp~~~~~~vi~ei~~~mk~gaiLid~aGv~l~-~l~~~~~~~~~~i~vI~vh 236 (316)
+|++...++++++.+. .++.+|....|+... .+++ .+|.+ +++.+.
T Consensus 75 vK~~~~~~~l~~l~~~-~~~~ivs~~nGi~~~e~l~~---~~~~~-~vl~g~ 121 (307)
T 3ego_A 75 VKQHQLQSVFSSLERI-GKTNILFLQNGMGHIHDLKD---WHVGH-SIYVGI 121 (307)
T ss_dssp CCGGGHHHHHHHTTSS-CCCEEEECCSSSHHHHHHHT---CCCSC-EEEEEE
T ss_pred eCHHHHHHHHHHhhcC-CCCeEEEecCCccHHHHHHH---hCCCC-cEEEEE
Confidence 9999999999888764 566656678898754 5554 44543 454433
No 130
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=98.63 E-value=5.3e-07 Score=94.71 Aligned_cols=156 Identities=13% Similarity=0.121 Sum_probs=113.2
Q ss_pred CCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH-----------CCceec-C-----CCcCCH
Q 021218 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEE-N-----GTLGDI 172 (316)
Q Consensus 110 G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~-----------~G~~~~-~-----~t~~~~ 172 (316)
-|++|||||.|.||..+|..+... |++|++.+...+ ..+.+.+ .+.... . -...+.
T Consensus 315 ~i~~v~ViGaG~MG~gIA~~~a~a------G~~V~l~D~~~~-~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 387 (742)
T 3zwc_A 315 PVSSVGVLGLGTMGRGIAISFARV------GISVVAVESDPK-QLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSS 387 (742)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSHH-HHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESC
T ss_pred cccEEEEEcccHHHHHHHHHHHhC------CCchhcccchHh-hhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCc
Confidence 358999999999999999999988 999887765432 2221111 010000 0 001223
Q ss_pred HhhhccCCEEEEcccCchHHH--HHHHHHhcCCCCcEEE-EeCCchhhhhhccccCCCCCccEEEeccCCCchhhHHHHh
Q 021218 173 YETISGSDLVLLLISDAAQAD--NYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYV 249 (316)
Q Consensus 173 ~e~i~~ADIViLavp~~~~~~--vi~ei~~~mk~gaiLi-d~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf~ 249 (316)
.+.+++||+||=+++-+-..+ ++.++-+++++++||. .++++.+..+.. .....-+|++.|+=-|.+.|
T Consensus 388 ~~~l~~aDlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSsl~i~~ia~---~~~~p~r~ig~HFfnP~~~m----- 459 (742)
T 3zwc_A 388 TKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIAS---STDRPQLVIGTHFFSPAHVM----- 459 (742)
T ss_dssp GGGGGSCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHT---TSSCGGGEEEEECCSSTTTC-----
T ss_pred HHHHhhCCEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCcCChHHHHh---hcCCccccccccccCCCCCC-----
Confidence 345889999999999888754 8999999999999986 788888887775 22334579999996666663
Q ss_pred cCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCCCe
Q 021218 250 QGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT 289 (316)
Q Consensus 250 ~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~~~ 289 (316)
.-.=|.+++.++++.++.+.++.+.+|..-+
T Consensus 460 ---------~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~pV 490 (742)
T 3zwc_A 460 ---------RLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 490 (742)
T ss_dssp ---------CEEEEEECSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred ---------ceEEEecCCCCCHHHHHHHHHHHHHhCCCCc
Confidence 1223788999999999999999999995543
No 131
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.63 E-value=3.2e-07 Score=73.84 Aligned_cols=95 Identities=14% Similarity=0.039 Sum_probs=63.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHH-HCCceecCCCcCCHHh----hhccCCEEEEcc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEENGTLGDIYE----TISGSDLVLLLI 186 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~-~~G~~~~~~t~~~~~e----~i~~ADIViLav 186 (316)
|+|.|||+|.+|..+++.|.+. |++|++.+++. +..+... ..|+....+...+.+. .++++|+|++++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~------g~~v~~~d~~~-~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~ 77 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK------GHDIVLIDIDK-DICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT 77 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH-HHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCH-HHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEee
Confidence 7899999999999999999998 88887776653 3333333 3464211111223222 267899999999
Q ss_pred cCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 187 SDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 187 p~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
|+......+.++.+.++++.++..+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~ii~~~~~ 104 (140)
T 1lss_A 78 GKEEVNLMSSLLAKSYGINKTIARISE 104 (140)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred CCchHHHHHHHHHHHcCCCEEEEEecC
Confidence 987665555566666777776665544
No 132
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.62 E-value=1.1e-08 Score=84.98 Aligned_cols=91 Identities=20% Similarity=0.157 Sum_probs=68.4
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccC
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~ 188 (316)
.| ++|+|||.|.||.++++.|+.. |.+|.+.+++.++..+.+++.|.... ...+..++++++|+|+.++|.
T Consensus 20 ~~-~~v~iiG~G~iG~~~a~~l~~~------g~~v~v~~r~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~Divi~at~~ 90 (144)
T 3oj0_A 20 GG-NKILLVGNGMLASEIAPYFSYP------QYKVTVAGRNIDHVRAFAEKYEYEYV--LINDIDSLIKNNDVIITATSS 90 (144)
T ss_dssp CC-CEEEEECCSHHHHHHGGGCCTT------TCEEEEEESCHHHHHHHHHHHTCEEE--ECSCHHHHHHTCSEEEECSCC
T ss_pred cC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEcCCHHHHHHHHHHhCCceE--eecCHHHHhcCCCEEEEeCCC
Confidence 38 9999999999999999999888 88877777765544455666664321 145788899999999999997
Q ss_pred chHHHHHHHHHhcCCCCcEEEEeC
Q 021218 189 AAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 189 ~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
... ++. .+.+++|.+++|++
T Consensus 91 ~~~--~~~--~~~l~~g~~vid~~ 110 (144)
T 3oj0_A 91 KTP--IVE--ERSLMPGKLFIDLG 110 (144)
T ss_dssp SSC--SBC--GGGCCTTCEEEECC
T ss_pred CCc--Eee--HHHcCCCCEEEEcc
Confidence 632 222 25678898888774
No 133
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.60 E-value=4.1e-07 Score=90.03 Aligned_cols=162 Identities=12% Similarity=0.150 Sum_probs=97.2
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhh-------------
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYET------------- 175 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~------------- 175 (316)
.| .++.|||+|.||..+|..|.+. |++|++.+++ ++..+.. ..|.... ....++|+
T Consensus 10 ~~-~~~~ViGlGyvGlp~A~~La~~------G~~V~~~D~~-~~kv~~L-~~g~~pi--~epgl~~ll~~~~~~g~l~~t 78 (431)
T 3ojo_A 10 HG-SKLTVVGLGYIGLPTSIMFAKH------GVDVLGVDIN-QQTIDKL-QNGQISI--EEPGLQEVYEEVLSSGKLKVS 78 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHH-HTTCCSS--CCTTHHHHHHHHHHTTCEEEE
T ss_pred cC-CccEEEeeCHHHHHHHHHHHHC------CCEEEEEECC-HHHHHHH-HCCCCCc--CCCCHHHHHHhhcccCceEEe
Confidence 47 9999999999999999999999 9998766654 3333222 2331100 00011111
Q ss_pred --hccCCEEEEcccCch------------HHHHHHHHHhcCCCCcEEEEeCCchhh---h-----hhccccCCCCCccEE
Q 021218 176 --ISGSDLVLLLISDAA------------QADNYEKIFSCMKPNSILGLSHGFLLG---H-----LQSMGLDFPKNIGVI 233 (316)
Q Consensus 176 --i~~ADIViLavp~~~------------~~~vi~ei~~~mk~gaiLid~aGv~l~---~-----l~~~~~~~~~~i~vI 233 (316)
+++||+||+|+|... .....+.+.+++++|++|++.+++... . ++..+.....++ .+
T Consensus 79 td~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~d~-~v 157 (431)
T 3ojo_A 79 TTPEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDI-YL 157 (431)
T ss_dssp SSCCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTTTE-EE
T ss_pred CchhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCCCe-EE
Confidence 468999999999765 234556899999999999988776422 1 111121111222 35
Q ss_pred Eecc--CCCchhhHHHHhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCCCeeecCh
Q 021218 234 AVCP--KGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTL 294 (316)
Q Consensus 234 ~vhP--n~pg~~~r~lf~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~~~~~tT~ 294 (316)
...| -.+|....+... .+.++. .. ++++.+.++.+++.++...+..+++
T Consensus 158 ~~~Pe~~~~G~A~~~~~~---------p~~Iv~-G~--~~~~~~~~~~ly~~~~~~~~~~~~~ 208 (431)
T 3ojo_A 158 VHCPERVLPGKILEELVH---------NNRIIG-GV--TKACIEAGKRVYRTFVQGEMIETDA 208 (431)
T ss_dssp EECCCCCCTTSHHHHHHH---------SCEEEE-ES--SHHHHHHHHHHHTTTCCSCEEEEEH
T ss_pred EECCCcCCCcchhhcccC---------CCEEEE-eC--CHHHHHHHHHHHHHHhCCcEEeCCH
Confidence 6677 233444322221 123222 22 5789999999999999755554544
No 134
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=98.59 E-value=1e-07 Score=95.95 Aligned_cols=92 Identities=22% Similarity=0.318 Sum_probs=74.8
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcc
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLav 186 (316)
.+.| ++|+|||+|.||..+|+.++.. |++|++.++. +...+.+++.|+. ..+++++++++|+|++++
T Consensus 271 ~l~G-ktV~IiG~G~IG~~~A~~lka~------Ga~Viv~d~~-~~~~~~A~~~Ga~-----~~~l~e~l~~aDvVi~at 337 (494)
T 3ce6_A 271 LIGG-KKVLICGYGDVGKGCAEAMKGQ------GARVSVTEID-PINALQAMMEGFD-----VVTVEEAIGDADIVVTAT 337 (494)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCHHHHGGGCSEEEECS
T ss_pred CCCc-CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCE-----EecHHHHHhCCCEEEECC
Confidence 6789 9999999999999999999999 9987665544 4455677888885 347888999999999999
Q ss_pred cCchHHHHHH-HHHhcCCCCcEEEEeCCc
Q 021218 187 SDAAQADNYE-KIFSCMKPNSILGLSHGF 214 (316)
Q Consensus 187 p~~~~~~vi~-ei~~~mk~gaiLid~aGv 214 (316)
+... ++. +.++.||+|.+|++++..
T Consensus 338 gt~~---~i~~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 338 GNKD---IIMLEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp SSSC---SBCHHHHHHSCTTCEEEECSSS
T ss_pred CCHH---HHHHHHHHhcCCCcEEEEeCCC
Confidence 7654 344 677889999999987654
No 135
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.58 E-value=3.4e-08 Score=90.16 Aligned_cols=90 Identities=19% Similarity=0.138 Sum_probs=68.3
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcc
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLav 186 (316)
+++| +|+|||.|.||.++++.|.+. |.+|.+.+|+.++..+.+.+.|.. ..+.+++ +++|+|++++
T Consensus 114 ~l~~--~v~iiG~G~~g~~~a~~l~~~------g~~v~v~~r~~~~~~~l~~~~~~~-----~~~~~~~-~~~Divi~~t 179 (263)
T 2d5c_A 114 PLKG--PALVLGAGGAGRAVAFALREA------GLEVWVWNRTPQRALALAEEFGLR-----AVPLEKA-REARLLVNAT 179 (263)
T ss_dssp CCCS--CEEEECCSHHHHHHHHHHHHT------TCCEEEECSSHHHHHHHHHHHTCE-----ECCGGGG-GGCSEEEECS
T ss_pred CCCC--eEEEECCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHhccc-----hhhHhhc-cCCCEEEEcc
Confidence 5677 899999999999999999998 887777777644444455555543 2367778 9999999999
Q ss_pred cCchHH---HHHHHHHhcCCCCcEEEEeC
Q 021218 187 SDAAQA---DNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 187 p~~~~~---~vi~ei~~~mk~gaiLid~a 212 (316)
|+.... ..+. .+.+++|++|+|+.
T Consensus 180 p~~~~~~~~~~l~--~~~l~~g~~viD~~ 206 (263)
T 2d5c_A 180 RVGLEDPSASPLP--AELFPEEGAAVDLV 206 (263)
T ss_dssp STTTTCTTCCSSC--GGGSCSSSEEEESC
T ss_pred CCCCCCCCCCCCC--HHHcCCCCEEEEee
Confidence 998543 2232 46789999998865
No 136
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.55 E-value=8.7e-08 Score=90.19 Aligned_cols=93 Identities=12% Similarity=0.148 Sum_probs=68.7
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCC--ceecCCCcCCHHhhhccCCEEEEc
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAG--FTEENGTLGDIYETISGSDLVLLL 185 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G--~~~~~~t~~~~~e~i~~ADIViLa 185 (316)
.+ ++|+|||+|.||.+++++|.+. .|+ +|.++++..++..+.+.+.+ +.. ..+.+++++++|+|+++
T Consensus 134 ~~-~~igiIG~G~~g~~~a~~l~~~-----~g~~~V~v~dr~~~~~~~l~~~~~~~~~~----~~~~~e~v~~aDiVi~a 203 (312)
T 2i99_A 134 SS-EVLCILGAGVQAYSHYEIFTEQ-----FSFKEVRIWNRTKENAEKFADTVQGEVRV----CSSVQEAVAGADVIITV 203 (312)
T ss_dssp TC-CEEEEECCSHHHHHHHHHHHHH-----CCCSEEEEECSSHHHHHHHHHHSSSCCEE----CSSHHHHHTTCSEEEEC
T ss_pred CC-cEEEEECCcHHHHHHHHHHHHh-----CCCcEEEEEcCCHHHHHHHHHHhhCCeEE----eCCHHHHHhcCCEEEEE
Confidence 45 8999999999999999999763 155 67777766554445555555 442 45888999999999999
Q ss_pred ccCchHHHHHHHHHhcCCCCcEEEEeCCch
Q 021218 186 ISDAAQADNYEKIFSCMKPNSILGLSHGFL 215 (316)
Q Consensus 186 vp~~~~~~vi~ei~~~mk~gaiLid~aGv~ 215 (316)
+|.. ..++.+ +.+++|++|+++++..
T Consensus 204 tp~~--~~v~~~--~~l~~g~~vi~~g~~~ 229 (312)
T 2i99_A 204 TLAT--EPILFG--EWVKPGAHINAVGASR 229 (312)
T ss_dssp CCCS--SCCBCG--GGSCTTCEEEECCCCS
T ss_pred eCCC--CcccCH--HHcCCCcEEEeCCCCC
Confidence 9953 234432 5789999999886654
No 137
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.49 E-value=1.9e-07 Score=78.94 Aligned_cols=111 Identities=10% Similarity=0.003 Sum_probs=76.2
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEEEEecCCc-ccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcc
Q 021218 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (316)
Q Consensus 112 kkIGIIG~----G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLav 186 (316)
++|+|||. |.||..++++|++. |++|+..+.+.. +. -.|... ..++.|+....|++++++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~------G~~v~~vnp~~~g~~-----i~G~~~----~~sl~el~~~~Dlvii~v 78 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQ------GYHVIPVSPKVAGKT-----LLGQQG----YATLADVPEKVDMVDVFR 78 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHH------TCCEEEECSSSTTSE-----ETTEEC----CSSTTTCSSCCSEEECCS
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHC------CCEEEEeCCcccccc-----cCCeec----cCCHHHcCCCCCEEEEEe
Confidence 78999999 89999999999998 888554443320 11 146553 457788888999999999
Q ss_pred cCchHHHHHHHHHhcCCCCcEEEEeCCchhhhhhccccCCCCCccEEEeccCCCchh
Q 021218 187 SDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (316)
Q Consensus 187 p~~~~~~vi~ei~~~mk~gaiLid~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~ 243 (316)
|+....++++++.+ ...+.++++.+.+.-+..+. .-..++.++ .||+++-.
T Consensus 79 p~~~v~~v~~~~~~-~g~~~i~i~~~~~~~~l~~~---a~~~Gi~~i--gpnc~g~~ 129 (145)
T 2duw_A 79 NSEAAWGVAQEAIA-IGAKTLWLQLGVINEQAAVL---AREAGLSVV--MDRCPAIE 129 (145)
T ss_dssp CSTHHHHHHHHHHH-HTCCEEECCTTCCCHHHHHH---HHTTTCEEE--CSCCHHHH
T ss_pred CHHHHHHHHHHHHH-cCCCEEEEcCChHHHHHHHH---HHHcCCEEE--cCCeeeEE
Confidence 99888889987766 44566766665553222221 112355554 48887765
No 138
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.48 E-value=1.9e-07 Score=91.18 Aligned_cols=98 Identities=13% Similarity=0.083 Sum_probs=72.7
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecC---------CC---------
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN---------GT--------- 168 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~---------~t--------- 168 (316)
.+++ .+++|||.|.||...++.++.. |.+|++.+++ ....+.+.+.|....+ +.
T Consensus 181 ~v~~-~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~-~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~ 252 (381)
T 3p2y_A 181 TVKP-ASALVLGVGVAGLQALATAKRL------GAKTTGYDVR-PEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAER 252 (381)
T ss_dssp EECC-CEEEEESCSHHHHHHHHHHHHH------TCEEEEECSS-GGGHHHHHHTTCEECCCC-------------CHHHH
T ss_pred CcCC-CEEEEECchHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCeEEeccccccccccchhhhhHHHH
Confidence 4567 8999999999999999999999 9987766655 4456667777653210 00
Q ss_pred ---cCCHHhhhccCCEEEEcc--cCchHHHHH-HHHHhcCCCCcEEEEeC
Q 021218 169 ---LGDIYETISGSDLVLLLI--SDAAQADNY-EKIFSCMKPNSILGLSH 212 (316)
Q Consensus 169 ---~~~~~e~i~~ADIViLav--p~~~~~~vi-~ei~~~mk~gaiLid~a 212 (316)
..++.+.++++|+||.++ |......++ ++..+.||||++|+|++
T Consensus 253 ~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 253 AQQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred hhhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe
Confidence 124678999999999886 543333444 58889999999999986
No 139
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=98.46 E-value=1.3e-08 Score=94.35 Aligned_cols=97 Identities=12% Similarity=0.141 Sum_probs=69.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhh-ccCCEEEEcccCch
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISDAA 190 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i-~~ADIViLavp~~~ 190 (316)
|+|+|||.|+||.++|..|.+. |.+|.+..|..+. .+.....|.... ....+..+.+ +.+|+|++++|++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~------g~~V~~~~r~~~~-~~~~~~~g~~~~-~~~~~~~~~~~~~~D~vilavk~~~ 74 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS------LPHTTLIGRHAKT-ITYYTVPHAPAQ-DIVVKGYEDVTNTFDVIIIAVKTHQ 74 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH------CTTCEEEESSCEE-EEEESSTTSCCE-EEEEEEGGGCCSCEEEEEECSCGGG
T ss_pred cEEEEECCCHHHHHHHHHHHHC------CCeEEEEEeccCc-EEEEecCCeecc-ceecCchHhcCCCCCEEEEeCCccC
Confidence 7999999999999999999998 8888877776432 111112232100 0011334444 88999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEE-EeCCchh
Q 021218 191 QADNYEKIFSCMKPNSILG-LSHGFLL 216 (316)
Q Consensus 191 ~~~vi~ei~~~mk~gaiLi-d~aGv~l 216 (316)
..++++++.++++++++|+ ...|+..
T Consensus 75 ~~~~l~~l~~~l~~~~~iv~~~nGi~~ 101 (294)
T 3g17_A 75 LDAVIPHLTYLAHEDTLIILAQNGYGQ 101 (294)
T ss_dssp HHHHGGGHHHHEEEEEEEEECCSSCCC
T ss_pred HHHHHHHHHHhhCCCCEEEEeccCccc
Confidence 9999999999998887655 6678764
No 140
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.45 E-value=6.4e-07 Score=89.69 Aligned_cols=162 Identities=22% Similarity=0.239 Sum_probs=97.1
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcc---cHHHHHH---------------------CCceec
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSR---SFAEARA---------------------AGFTEE 165 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~---s~~~A~~---------------------~G~~~~ 165 (316)
+|+|+|||+|.||..+|..|.+. .|+ +|++.+++.++ ..+...+ .|...
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~-----~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~- 91 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADA-----PCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFE- 91 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHS-----TTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEE-
T ss_pred CCEEEEECcCHHHHHHHHHHHHh-----CCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeE-
Confidence 38999999999999999998764 167 88777665440 2221111 22211
Q ss_pred CCCcCCHHhhhccCCEEEEcccCch------------HHHHHHHHHhcCCCCcEEEEeCCchhh--------hh-hcccc
Q 021218 166 NGTLGDIYETISGSDLVLLLISDAA------------QADNYEKIFSCMKPNSILGLSHGFLLG--------HL-QSMGL 224 (316)
Q Consensus 166 ~~t~~~~~e~i~~ADIViLavp~~~------------~~~vi~ei~~~mk~gaiLid~aGv~l~--------~l-~~~~~ 224 (316)
...+ .+++++||+||+++|... .....+.+.+++++|++|++.+++... .+ +..+.
T Consensus 92 --~ttd-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~g~ 168 (478)
T 3g79_A 92 --CTPD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESGL 168 (478)
T ss_dssp --EESC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHHCC
T ss_pred --EeCc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhcCC
Confidence 1234 678999999999998653 233556899999999999988766421 11 11122
Q ss_pred CCCCCccEEEeccC--CCchhhHHHHhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHc-CCCCeeecCh
Q 021218 225 DFPKNIGVIAVCPK--GMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVAL-GSPFTFATTL 294 (316)
Q Consensus 225 ~~~~~i~vI~vhPn--~pg~~~r~lf~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~al-G~~~~~~tT~ 294 (316)
....++ .+...|. .+|....+...- ..++ .. .+++..+.++.+++.+ +.+.+..+++
T Consensus 169 ~~~~d~-~v~~~Pe~~~~G~a~~~~~~~---------~~Iv-~G--~~~~~~~~~~~ly~~~~~~~~~~~~~~ 228 (478)
T 3g79_A 169 KAGEDF-ALAHAPERVMVGRLLKNIREH---------DRIV-GG--IDEASTKRAVELYSPVLTVGQVIPMSA 228 (478)
T ss_dssp CBTTTB-EEEECCCCCCTTSHHHHHHHS---------CEEE-EE--SSHHHHHHHHHHHGGGCSSCCEEEEEH
T ss_pred CcCCce-eEEeCCccCCccchhhhhcCC---------cEEE-Ee--CCHHHHHHHHHHHhhhccCCeEEeCCH
Confidence 111222 3566773 344443222221 1322 22 2456779999999999 7654444443
No 141
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=98.43 E-value=1.6e-07 Score=90.81 Aligned_cols=99 Identities=17% Similarity=0.113 Sum_probs=70.5
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH-CCcee--cCCCcCCHHhhhccCCEE
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTE--ENGTLGDIYETISGSDLV 182 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~-~G~~~--~~~t~~~~~e~i~~ADIV 182 (316)
..++| ++++|||.|.||.++++.++.. |++|++.+++ ....+.+++ .|... ......++++.++++|+|
T Consensus 164 ~~l~g-~~V~ViG~G~iG~~~a~~a~~~------Ga~V~~~d~~-~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvV 235 (377)
T 2vhw_A 164 PGVEP-ADVVVIGAGTAGYNAARIANGM------GATVTVLDIN-IDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLV 235 (377)
T ss_dssp TTBCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESC-HHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEE
T ss_pred CCCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCC-HHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEE
Confidence 57899 9999999999999999999999 9987766654 333444444 45320 000122567888999999
Q ss_pred EEccc--CchHHHH-HHHHHhcCCCCcEEEEeC
Q 021218 183 LLLIS--DAAQADN-YEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 183 iLavp--~~~~~~v-i~ei~~~mk~gaiLid~a 212 (316)
|.+++ ......+ .++.++.||+|.+|++++
T Consensus 236 i~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 236 IGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp EECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred EECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 99774 3322233 357788899999999886
No 142
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.34 E-value=5.7e-07 Score=88.48 Aligned_cols=98 Identities=18% Similarity=0.168 Sum_probs=72.7
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecC-------------CCc----
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN-------------GTL---- 169 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~-------------~t~---- 169 (316)
.+++ .+|+|||.|.+|...++.++.. |.+|++.+++. ...+.+.+.|..... +..
T Consensus 187 ~v~~-~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~~-~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s 258 (405)
T 4dio_A 187 TVPA-AKIFVMGAGVAGLQAIATARRL------GAVVSATDVRP-AAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMS 258 (405)
T ss_dssp EECC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSST-THHHHHHHTTCEECCCCC-----------------
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHC------CCEEEEEcCCH-HHHHHHHHcCCceeecccccccccccccchhhhcc
Confidence 4577 8999999999999999999999 99887766654 445666667653100 000
Q ss_pred --------CCHHhhhccCCEEEEcc--cCchHHHHH-HHHHhcCCCCcEEEEeC
Q 021218 170 --------GDIYETISGSDLVLLLI--SDAAQADNY-EKIFSCMKPNSILGLSH 212 (316)
Q Consensus 170 --------~~~~e~i~~ADIViLav--p~~~~~~vi-~ei~~~mk~gaiLid~a 212 (316)
.++.++++++|+||.++ |......++ ++..+.||||++|+|++
T Consensus 259 ~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 259 GEYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp CHHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred hhhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 14678899999999885 544444444 48889999999999986
No 143
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.33 E-value=1e-06 Score=79.05 Aligned_cols=80 Identities=24% Similarity=0.240 Sum_probs=59.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhh-ccCCEEEEcccCch
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISDAA 190 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i-~~ADIViLavp~~~ 190 (316)
++|||||+|.||..+++++.+. |+++....+++.+. .+ . ..+.++++ .++|+|++++|+..
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~------g~~lv~v~d~~~~~----~~---~-----~~~~~~l~~~~~DvVv~~~~~~~ 62 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERN------GFEIAAILDVRGEH----EK---M-----VRGIDEFLQREMDVAVEAASQQA 62 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEECSSCCC----TT---E-----ESSHHHHTTSCCSEEEECSCHHH
T ss_pred CEEEEECCCHHHHHHHHHHhcC------CCEEEEEEecCcch----hh---h-----cCCHHHHhcCCCCEEEECCCHHH
Confidence 5899999999999999999876 88874343333321 11 2 45788988 79999999999998
Q ss_pred HHHHHHHHHhcCCCCcEEEEeC
Q 021218 191 QADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 191 ~~~vi~ei~~~mk~gaiLid~a 212 (316)
+.+++... +++|+.+++..
T Consensus 63 ~~~~~~~~---l~~G~~vv~~~ 81 (236)
T 2dc1_A 63 VKDYAEKI---LKAGIDLIVLS 81 (236)
T ss_dssp HHHHHHHH---HHTTCEEEESC
T ss_pred HHHHHHHH---HHCCCcEEEEC
Confidence 77766543 45688777654
No 144
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.28 E-value=2.2e-06 Score=80.05 Aligned_cols=70 Identities=19% Similarity=0.201 Sum_probs=49.5
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCC--cEEEEEecCCcccHHHHHHCC---------ceecCCCcCCHHhhhccC
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRSFAEARAAG---------FTEENGTLGDIYETISGS 179 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G--~~Vivg~r~~~~s~~~A~~~G---------~~~~~~t~~~~~e~i~~A 179 (316)
|++|+|||.|+||.++|..|... | .+|.+.+++.++....+.+.+ ... ...+. +.+++|
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~------g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~d~-~~~~~a 70 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQ------GVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNI---VINDW-AALADA 70 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEE---EESCG-GGGTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEE---EeCCH-HHhCCC
Confidence 58999999999999999999988 7 577777665333222332211 111 02355 778999
Q ss_pred CEEEEcccCch
Q 021218 180 DLVLLLISDAA 190 (316)
Q Consensus 180 DIViLavp~~~ 190 (316)
|+||+++|...
T Consensus 71 DvViiav~~~~ 81 (309)
T 1hyh_A 71 DVVISTLGNIK 81 (309)
T ss_dssp SEEEECCSCGG
T ss_pred CEEEEecCCcc
Confidence 99999999866
No 145
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.26 E-value=1.2e-06 Score=85.60 Aligned_cols=98 Identities=13% Similarity=0.095 Sum_probs=70.9
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCc-----------------
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL----------------- 169 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~----------------- 169 (316)
.++| ++++|||.|.+|...++.++.. |.+|++.+++ ....+.+++.|.....-..
T Consensus 169 ~l~g-~~V~ViGaG~iG~~aa~~a~~~------Ga~V~v~D~~-~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~ 240 (401)
T 1x13_A 169 KVPP-AKVMVIGAGVAGLAAIGAANSL------GAIVRAFDTR-PEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDA 240 (401)
T ss_dssp EECC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-GGGHHHHHHTTCEECCC--------CCHHHHHHSHH
T ss_pred CcCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCC-HHHHHHHHHcCCEEEEecccccccccccchhhccHH
Confidence 5789 9999999999999999999999 9987666655 4445566777754210000
Q ss_pred ------CCHHhhhccCCEEEEc--ccCchHHHHH-HHHHhcCCCCcEEEEeC
Q 021218 170 ------GDIYETISGSDLVLLL--ISDAAQADNY-EKIFSCMKPNSILGLSH 212 (316)
Q Consensus 170 ------~~~~e~i~~ADIViLa--vp~~~~~~vi-~ei~~~mk~gaiLid~a 212 (316)
.++.+.++++|+||.+ +|......++ ++.++.||+|.+|+|++
T Consensus 241 ~~~~~~~~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 241 FIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHHHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence 0256788899999999 5532222444 46778899999999886
No 146
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.25 E-value=3.8e-06 Score=70.21 Aligned_cols=102 Identities=15% Similarity=0.089 Sum_probs=64.1
Q ss_pred cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHH-HCCceecCCCcCCH---Hhh-hcc
Q 021218 104 LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEENGTLGDI---YET-ISG 178 (316)
Q Consensus 104 ~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~-~~G~~~~~~t~~~~---~e~-i~~ 178 (316)
.+....+ ++|.|||+|.+|..+++.|++. |.+|++.+++.+ ..+.+. +.|.....+...+. .++ +.+
T Consensus 13 ~~~~~~~-~~v~IiG~G~iG~~la~~L~~~------g~~V~vid~~~~-~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ 84 (155)
T 2g1u_A 13 MSKKQKS-KYIVIFGCGRLGSLIANLASSS------GHSVVVVDKNEY-AFHRLNSEFSGFTVVGDAAEFETLKECGMEK 84 (155)
T ss_dssp ----CCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCGG-GGGGSCTTCCSEEEESCTTSHHHHHTTTGGG
T ss_pred hhcccCC-CcEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHH-HHHHHHhcCCCcEEEecCCCHHHHHHcCccc
Confidence 3688889 9999999999999999999998 988877766533 333333 44542111111222 223 678
Q ss_pred CCEEEEcccCchHHHHHHHHHhcCCCCc-EEEEeCC
Q 021218 179 SDLVLLLISDAAQADNYEKIFSCMKPNS-ILGLSHG 213 (316)
Q Consensus 179 ADIViLavp~~~~~~vi~ei~~~mk~ga-iLid~aG 213 (316)
+|+|++++++......+.++...+.+.. ++..+.+
T Consensus 85 ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 85 ADMVFAFTNDDSTNFFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp CSEEEECSSCHHHHHHHHHHHHHTSCCSEEEEECSS
T ss_pred CCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 9999999998776665555555443433 3444444
No 147
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.22 E-value=3.6e-06 Score=79.10 Aligned_cols=81 Identities=17% Similarity=0.151 Sum_probs=60.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCccc-HHHHHHCCceecCCCcCCHHhhhc--cCCEEEEcccC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS-FAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s-~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLavp~ 188 (316)
++|||||+|.||..+++++++. .+.+++...+++... .+.+.+.|... ..+.+++++ +.|+|++++|+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~g~~~----~~~~~~~l~~~~~D~V~i~tp~ 75 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAAN-----PDLELVVIADPFIEGAQRLAEANGAEA----VASPDEVFARDDIDGIVIGSPT 75 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECSSHHHHHHHHHTTTCEE----ESSHHHHTTCSCCCEEEECSCG
T ss_pred eEEEEECCcHHHHHHHHHHHhC-----CCcEEEEEECCCHHHHHHHHHHcCCce----eCCHHHHhcCCCCCEEEEeCCc
Confidence 6899999999999999999874 146665444444433 34466667543 568999998 89999999999
Q ss_pred chHHHHHHHHHhc
Q 021218 189 AAQADNYEKIFSC 201 (316)
Q Consensus 189 ~~~~~vi~ei~~~ 201 (316)
..+.+++.+.+..
T Consensus 76 ~~h~~~~~~al~~ 88 (344)
T 3euw_A 76 STHVDLITRAVER 88 (344)
T ss_dssp GGHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHc
Confidence 9998877765543
No 148
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.21 E-value=2.1e-06 Score=79.52 Aligned_cols=80 Identities=14% Similarity=0.130 Sum_probs=60.2
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCc-ccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCc
Q 021218 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (316)
Q Consensus 112 kkIGIIG~G~mG~A-lA~~Lr~~~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~ 189 (316)
++|||||+|.||.. ++..+++. .+.+++...++++ +..+.+.+.|+.. ..+.++++++.|+|++++|+.
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~~~~~----~~~~~~ll~~~D~V~i~tp~~ 77 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKS-----ERFEFVGAFTPNKVKREKICSDYRIMP----FDSIESLAKKCDCIFLHSSTE 77 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSC-----SSSEEEEEECSCHHHHHHHHHHHTCCB----CSCHHHHHTTCSEEEECCCGG
T ss_pred CcEEEEecCHHHHHHHHHHHHhC-----CCeEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHHHhcCCEEEEeCCcH
Confidence 68999999999996 88888763 1566664444443 3444566667652 568999999999999999999
Q ss_pred hHHHHHHHHHh
Q 021218 190 AQADNYEKIFS 200 (316)
Q Consensus 190 ~~~~vi~ei~~ 200 (316)
.+.+++.+.+.
T Consensus 78 ~h~~~~~~al~ 88 (308)
T 3uuw_A 78 THYEIIKILLN 88 (308)
T ss_dssp GHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 99887776544
No 149
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.20 E-value=1.2e-06 Score=84.14 Aligned_cols=96 Identities=20% Similarity=0.202 Sum_probs=67.8
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCC-cEEEEEecCCcccHHHHHHC----CceecCCCcCCHHhhhccCCEEE
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAA----GFTEENGTLGDIYETISGSDLVL 183 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G-~~Vivg~r~~~~s~~~A~~~----G~~~~~~t~~~~~e~i~~ADIVi 183 (316)
.. ++|+|||.|.||.++++++.... + .+|.+++|+.++..+.+.+. |+... ...+.+++++++|+|+
T Consensus 128 ~~-~~v~iIGaG~~a~~~a~al~~~~-----~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~--~~~~~~eav~~aDiVi 199 (350)
T 1x7d_A 128 NA-RKMALIGNGAQSEFQALAFHKHL-----GIEEIVAYDTDPLATAKLIANLKEYSGLTIR--RASSVAEAVKGVDIIT 199 (350)
T ss_dssp TC-CEEEEECCSTTHHHHHHHHHHHS-----CCCEEEEECSSHHHHHHHHHHHTTCTTCEEE--ECSSHHHHHTTCSEEE
T ss_pred cC-CeEEEECCcHHHHHHHHHHHHhC-----CCcEEEEEcCCHHHHHHHHHHHHhccCceEE--EeCCHHHHHhcCCEEE
Confidence 45 89999999999999999986530 3 36777777655544555443 53210 1458889999999999
Q ss_pred EcccCchHHHHHHHHHhcCCCCcEEEEeCCc
Q 021218 184 LLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (316)
Q Consensus 184 Lavp~~~~~~vi~ei~~~mk~gaiLid~aGv 214 (316)
+|+|......++. .+.+++|++|++++.+
T Consensus 200 ~aTps~~~~pvl~--~~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 200 TVTADKAYATIIT--PDMLEPGMHLNAVGGD 228 (350)
T ss_dssp ECCCCSSEEEEEC--GGGCCTTCEEEECSCC
T ss_pred EeccCCCCCceec--HHHcCCCCEEEECCCC
Confidence 9999863222332 2568999999988764
No 150
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.19 E-value=3.4e-06 Score=78.83 Aligned_cols=79 Identities=20% Similarity=0.200 Sum_probs=59.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCc-ccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEcccC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLavp~ 188 (316)
++|||||+|.||..+++.+++. .+.+++...+++. +..+.+.+.|+. ..+.+++++ +.|+|++++|+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~D~V~i~tp~ 73 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGN-----ADARLVAVADAFPAAAEAIAGAYGCE-----VRTIDAIEAAADIDAVVICTPT 73 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECSSHHHHHHHHHHTTCE-----ECCHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEECCCHHHHHHHHHHhhC-----CCcEEEEEECCCHHHHHHHHHHhCCC-----cCCHHHHhcCCCCCEEEEeCCc
Confidence 6899999999999999999874 1566654444443 334556667765 458899987 89999999999
Q ss_pred chHHHHHHHHHh
Q 021218 189 AAQADNYEKIFS 200 (316)
Q Consensus 189 ~~~~~vi~ei~~ 200 (316)
..+.+++.+.+.
T Consensus 74 ~~h~~~~~~al~ 85 (331)
T 4hkt_A 74 DTHADLIERFAR 85 (331)
T ss_dssp GGHHHHHHHHHH
T ss_pred hhHHHHHHHHHH
Confidence 999887776544
No 151
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.19 E-value=1.2e-05 Score=65.60 Aligned_cols=93 Identities=16% Similarity=0.052 Sum_probs=60.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhh----hccCCEEEEccc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYET----ISGSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~----i~~ADIViLavp 187 (316)
++|.|+|+|.+|.++++.|.+. |++|++.+++ ++..+.+.+.|+....+...+.+.+ ++++|+|++++|
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~------g~~V~~id~~-~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA------GKKVLAVDKS-KEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEESC-HHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCeEEEEECC-HHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 7899999999999999999998 9987766654 4455566666753211122233221 468999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEe
Q 021218 188 DAAQADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~gaiLid~ 211 (316)
+......+......+....++.-+
T Consensus 80 ~~~~n~~~~~~a~~~~~~~iia~~ 103 (141)
T 3llv_A 80 DDEFNLKILKALRSVSDVYAIVRV 103 (141)
T ss_dssp CHHHHHHHHHHHHHHCCCCEEEEE
T ss_pred CHHHHHHHHHHHHHhCCceEEEEE
Confidence 665544444444333333444433
No 152
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=98.19 E-value=3.3e-06 Score=81.55 Aligned_cols=99 Identities=13% Similarity=0.122 Sum_probs=71.5
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec--CCC---------------
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE--NGT--------------- 168 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~--~~t--------------- 168 (316)
..++| ++++|||.|.+|...++.++.. |.+|++.+++. ...+.+++.|.... +..
T Consensus 168 ~~l~g-~~V~ViGaG~iG~~aa~~a~~~------Ga~V~~~d~~~-~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~ 239 (384)
T 1l7d_A 168 GTVPP-ARVLVFGVGVAGLQAIATAKRL------GAVVMATDVRA-ATKEQVESLGGKFITVDDEAMKTAETAGGYAKEM 239 (384)
T ss_dssp EEECC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCS-TTHHHHHHTTCEECCC------------------
T ss_pred CCCCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHcCCeEEeecccccccccccccchhhc
Confidence 47899 9999999999999999999999 99876666553 44556666775321 000
Q ss_pred --------cCCHHhhhccCCEEEEcc--cCchHHHHH-HHHHhcCCCCcEEEEeC
Q 021218 169 --------LGDIYETISGSDLVLLLI--SDAAQADNY-EKIFSCMKPNSILGLSH 212 (316)
Q Consensus 169 --------~~~~~e~i~~ADIViLav--p~~~~~~vi-~ei~~~mk~gaiLid~a 212 (316)
...+.+.++++|+||.++ |......++ ++.++.||+|.+|+|++
T Consensus 240 s~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 240 GEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp -----CCHHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred CHHHHhhhHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence 001667889999999888 432222344 56778899999999886
No 153
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.17 E-value=1.1e-05 Score=66.54 Aligned_cols=87 Identities=20% Similarity=0.244 Sum_probs=58.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHH---h-hhccCCEEEEccc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY---E-TISGSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~---e-~i~~ADIViLavp 187 (316)
++|.|||+|.+|..+|+.|++. |++|++.+++ ++..+.+++.|+....+...+.+ + -++++|+|++++|
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~------g~~v~vid~~-~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS------DIPLVVIETS-RTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEEESC-HHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHHC------CCCEEEEECC-HHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence 5799999999999999999998 9987766654 45566667778643211122222 1 2578999999999
Q ss_pred CchHHHHHHHHHhcCCCC
Q 021218 188 DAAQADNYEKIFSCMKPN 205 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~g 205 (316)
+......+-.....+.++
T Consensus 81 ~~~~n~~~~~~a~~~~~~ 98 (140)
T 3fwz_A 81 NGYEAGEIVASARAKNPD 98 (140)
T ss_dssp CHHHHHHHHHHHHHHCSS
T ss_pred ChHHHHHHHHHHHHHCCC
Confidence 887665343333333343
No 154
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.16 E-value=8.1e-06 Score=65.64 Aligned_cols=99 Identities=12% Similarity=0.068 Sum_probs=59.2
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHH---hh-hccCCEE
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY---ET-ISGSDLV 182 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~---e~-i~~ADIV 182 (316)
.+++ ++|.|+|+|.+|..+++.|.+. |++|++.+++ +...+...+.|.....+...+.+ ++ +.++|+|
T Consensus 3 ~~~~-~~v~I~G~G~iG~~~a~~l~~~------g~~v~~~d~~-~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~v 74 (144)
T 2hmt_A 3 RIKN-KQFAVIGLGRFGGSIVKELHRM------GHEVLAVDIN-EEKVNAYASYATHAVIANATEENELLSLGIRNFEYV 74 (144)
T ss_dssp ---C-CSEEEECCSHHHHHHHHHHHHT------TCCCEEEESC-HHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEE
T ss_pred CCcC-CcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEE
Confidence 4566 8999999999999999999998 8887766654 33233333334321111122322 22 6789999
Q ss_pred EEcccCc-hHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 183 LLLISDA-AQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 183 iLavp~~-~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
+++++.. .....+.+....+.+..++..+.+
T Consensus 75 i~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 75 IVAIGANIQASTLTTLLLKELDIPNIWVKAQN 106 (144)
T ss_dssp EECCCSCHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred EECCCCchHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 9999976 333333344444555555554544
No 155
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.15 E-value=5e-06 Score=78.02 Aligned_cols=81 Identities=14% Similarity=0.135 Sum_probs=60.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCC-cccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEcccC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~-~~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLavp~ 188 (316)
++|||||+|.||..+++.+++. .+.+++...+++ ++..+.+.+.|+.. ...+.+++++ +.|+|++++|+
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~~~D~V~i~tp~ 77 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRES-----AQAEVRGIASRRLENAQKMAKELAIPV---AYGSYEELCKDETIDIIYIPTYN 77 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHS-----SSEEEEEEBCSSSHHHHHHHHHTTCCC---CBSSHHHHHHCTTCSEEEECCCG
T ss_pred EEEEEECchHHHHHHHHHHHhC-----CCcEEEEEEeCCHHHHHHHHHHcCCCc---eeCCHHHHhcCCCCCEEEEcCCC
Confidence 5899999999999999999874 155665444443 34445566677631 2568999987 89999999999
Q ss_pred chHHHHHHHHHh
Q 021218 189 AAQADNYEKIFS 200 (316)
Q Consensus 189 ~~~~~vi~ei~~ 200 (316)
..+.+++.+.+.
T Consensus 78 ~~h~~~~~~al~ 89 (330)
T 3e9m_A 78 QGHYSAAKLALS 89 (330)
T ss_dssp GGHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999887776544
No 156
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.15 E-value=3e-06 Score=80.31 Aligned_cols=90 Identities=16% Similarity=0.201 Sum_probs=66.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-cEEEEEecCCcccHHHHHH----CCceecCCCcCCHHhhhccCCEEEEcc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARA----AGFTEENGTLGDIYETISGSDLVLLLI 186 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G-~~Vivg~r~~~~s~~~A~~----~G~~~~~~t~~~~~e~i~~ADIViLav 186 (316)
++++|||.|.||.++++.|++.. + .+|.+++|+ +..+.+.+ .|+... .. +.++++++||+|+.|+
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~-----~~~~V~v~~r~--~a~~la~~l~~~~g~~~~--~~-~~~eav~~aDIVi~aT 191 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARF-----ALEAILVHDPY--ASPEILERIGRRCGVPAR--MA-APADIAAQADIVVTAT 191 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS-----CCCEEEEECTT--CCHHHHHHHHHHHTSCEE--EC-CHHHHHHHCSEEEECC
T ss_pred cEEEEECccHHHHHHHHHHHHhC-----CCcEEEEECCc--HHHHHHHHHHHhcCCeEE--Ee-CHHHHHhhCCEEEEcc
Confidence 89999999999999999998740 3 367777777 44444443 355321 14 8999999999999999
Q ss_pred cCchHHHHHHHHHhcCCCCcEEEEeCCch
Q 021218 187 SDAAQADNYEKIFSCMKPNSILGLSHGFL 215 (316)
Q Consensus 187 p~~~~~~vi~ei~~~mk~gaiLid~aGv~ 215 (316)
|... .++. .+.++||++|++++..+
T Consensus 192 ~s~~--pvl~--~~~l~~G~~V~~vGs~~ 216 (313)
T 3hdj_A 192 RSTT--PLFA--GQALRAGAFVGAIGSSL 216 (313)
T ss_dssp CCSS--CSSC--GGGCCTTCEEEECCCSS
T ss_pred CCCC--cccC--HHHcCCCcEEEECCCCC
Confidence 9752 2333 35689999999988764
No 157
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.14 E-value=4.8e-06 Score=78.67 Aligned_cols=81 Identities=10% Similarity=0.095 Sum_probs=60.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCc-ccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEcccC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLavp~ 188 (316)
++|||||+|.||...+.++++. ..+.+++...++++ +..+.+.+.|+.. ..+.+++++ +.|+|++++|+
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~----~~~~~lvav~d~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~D~V~i~tp~ 85 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKH----ADRAELIDVCDIDPAALKAAVERTGARG----HASLTDMLAQTDADIVILTTPS 85 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHT----TTTEEEEEEECSSHHHHHHHHHHHCCEE----ESCHHHHHHHCCCSEEEECSCG
T ss_pred ceEEEEcCcHHHHHHHHHHHhC----CCCeEEEEEEcCCHHHHHHHHHHcCCce----eCCHHHHhcCCCCCEEEECCCc
Confidence 6899999999999999998874 11566654444443 3344556677753 568999987 89999999999
Q ss_pred chHHHHHHHHHh
Q 021218 189 AAQADNYEKIFS 200 (316)
Q Consensus 189 ~~~~~vi~ei~~ 200 (316)
..+.+++.+.+.
T Consensus 86 ~~h~~~~~~al~ 97 (354)
T 3q2i_A 86 GLHPTQSIECSE 97 (354)
T ss_dssp GGHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999887765543
No 158
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.11 E-value=2e-05 Score=67.24 Aligned_cols=93 Identities=15% Similarity=0.090 Sum_probs=60.4
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCC---HHhh--hccCC
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYET--ISGSD 180 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~---~~e~--i~~AD 180 (316)
.++.+ ++|.|||+|.||..+++.|++. + |++|++.+++ ++..+.+.+.|+....+...+ +.++ ++++|
T Consensus 35 ~~~~~-~~v~IiG~G~~G~~~a~~L~~~----~-g~~V~vid~~-~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad 107 (183)
T 3c85_A 35 INPGH-AQVLILGMGRIGTGAYDELRAR----Y-GKISLGIEIR-EEAAQQHRSEGRNVISGDATDPDFWERILDTGHVK 107 (183)
T ss_dssp BCCTT-CSEEEECCSHHHHHHHHHHHHH----H-CSCEEEEESC-HHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCC
T ss_pred cCCCC-CcEEEECCCHHHHHHHHHHHhc----c-CCeEEEEECC-HHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCC
Confidence 45678 8999999999999999999763 0 5677666654 444555666775321111223 2344 67899
Q ss_pred EEEEcccCchHHHHHHHHHhcCCCC
Q 021218 181 LVLLLISDAAQADNYEKIFSCMKPN 205 (316)
Q Consensus 181 IViLavp~~~~~~vi~ei~~~mk~g 205 (316)
+|++++|+......+-.....+.++
T Consensus 108 ~vi~~~~~~~~~~~~~~~~~~~~~~ 132 (183)
T 3c85_A 108 LVLLAMPHHQGNQTALEQLQRRNYK 132 (183)
T ss_dssp EEEECCSSHHHHHHHHHHHHHTTCC
T ss_pred EEEEeCCChHHHHHHHHHHHHHCCC
Confidence 9999999876655433344444443
No 159
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.10 E-value=4e-06 Score=78.90 Aligned_cols=81 Identities=25% Similarity=0.236 Sum_probs=59.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCc-ccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEcccC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLavp~ 188 (316)
++|||||+|.||..+++.+++. .+.+++...+++. +..+.+.+.|+.. ...+.+++++ +.|+|++++|+
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~~~D~V~i~tp~ 74 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMI-----DDAILYAISDVREDRLREMKEKLGVEK---AYKDPHELIEDPNVDAVLVCSST 74 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGS-----TTEEEEEEECSCHHHHHHHHHHHTCSE---EESSHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEEcCCHHHHHHHHHHHhC-----CCcEEEEEECCCHHHHHHHHHHhCCCc---eeCCHHHHhcCCCCCEEEEcCCC
Confidence 6899999999999999998774 1456554444443 3344556666531 1568999988 89999999999
Q ss_pred chHHHHHHHHHh
Q 021218 189 AAQADNYEKIFS 200 (316)
Q Consensus 189 ~~~~~vi~ei~~ 200 (316)
..+.++..+.+.
T Consensus 75 ~~h~~~~~~al~ 86 (344)
T 3ezy_A 75 NTHSELVIACAK 86 (344)
T ss_dssp GGHHHHHHHHHH
T ss_pred cchHHHHHHHHh
Confidence 999887765544
No 160
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.10 E-value=6.3e-06 Score=76.85 Aligned_cols=89 Identities=13% Similarity=0.100 Sum_probs=61.9
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCc-ccHHHHHHCCceecCCCcCCHHhhh-ccCCEEEEcccC
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISD 188 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~t~~~~~e~i-~~ADIViLavp~ 188 (316)
|++|||||+|.||..+++.+++. .+.+++...+++. +..+.+.+.|... ...+.++++ ++.|+|++++|+
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~-----~~~~~~~v~d~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~D~V~i~tp~ 72 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS-----GEYQLVAIYSRKLETAATFASRYQNIQ---LFDQLEVFFKSSFDLVYIASPN 72 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-----TSEEEEEEECSSHHHHHHHGGGSSSCE---EESCHHHHHTSSCSEEEECSCG
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC-----CCeEEEEEEeCCHHHHHHHHHHcCCCe---EeCCHHHHhCCCCCEEEEeCCh
Confidence 47899999999999999999875 0356543344433 3333445556421 146889998 789999999999
Q ss_pred chHHHHHHHHHhcCCCCc-EEEE
Q 021218 189 AAQADNYEKIFSCMKPNS-ILGL 210 (316)
Q Consensus 189 ~~~~~vi~ei~~~mk~ga-iLid 210 (316)
..+.+++.+.+. .|+ +++.
T Consensus 73 ~~h~~~~~~al~---~gk~V~~E 92 (325)
T 2ho3_A 73 SLHFAQAKAALS---AGKHVILE 92 (325)
T ss_dssp GGHHHHHHHHHH---TTCEEEEE
T ss_pred HHHHHHHHHHHH---cCCcEEEe
Confidence 998887775543 455 4444
No 161
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=98.09 E-value=6.6e-06 Score=80.02 Aligned_cols=76 Identities=22% Similarity=0.317 Sum_probs=59.0
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEc
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLa 185 (316)
+++| ++|+|||.|.||..+++.++.. |+ +|++.+|...+..+.+.+.|.... ...++.+.++++|+||.+
T Consensus 164 ~l~g-~~VlIiGaG~iG~~~a~~l~~~------G~~~V~v~~r~~~ra~~la~~~g~~~~--~~~~l~~~l~~aDvVi~a 234 (404)
T 1gpj_A 164 SLHD-KTVLVVGAGEMGKTVAKSLVDR------GVRAVLVANRTYERAVELARDLGGEAV--RFDELVDHLARSDVVVSA 234 (404)
T ss_dssp CCTT-CEEEEESCCHHHHHHHHHHHHH------CCSEEEEECSSHHHHHHHHHHHTCEEC--CGGGHHHHHHTCSEEEEC
T ss_pred cccC-CEEEEEChHHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHHHcCCcee--cHHhHHHHhcCCCEEEEc
Confidence 5789 9999999999999999999999 98 787777764443456666675421 124677888999999999
Q ss_pred ccCchH
Q 021218 186 ISDAAQ 191 (316)
Q Consensus 186 vp~~~~ 191 (316)
+|....
T Consensus 235 t~~~~~ 240 (404)
T 1gpj_A 235 TAAPHP 240 (404)
T ss_dssp CSSSSC
T ss_pred cCCCCc
Confidence 986553
No 162
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=98.09 E-value=5.9e-06 Score=80.89 Aligned_cols=97 Identities=15% Similarity=0.209 Sum_probs=69.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--------EEEEEecCCc---ccHHHHHHC---------CceecC--CCc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--------VVKVGLRKGS---RSFAEARAA---------GFTEEN--GTL 169 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~--------~Vivg~r~~~---~s~~~A~~~---------G~~~~~--~t~ 169 (316)
.||+|||.|+.|.++|..|.+. |. +|.++.|+.+ +........ |+.-.+ ...
T Consensus 35 ~KI~ViGaGsWGTALA~~la~n------g~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t 108 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAEN------CKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVAN 108 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH------HHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHc------CCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEe
Confidence 4899999999999999999886 43 4777766533 111111111 111000 014
Q ss_pred CCHHhhhccCCEEEEcccCchHHHHHHHHHhcCCCCcEEE-EeCCc
Q 021218 170 GDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILG-LSHGF 214 (316)
Q Consensus 170 ~~~~e~i~~ADIViLavp~~~~~~vi~ei~~~mk~gaiLi-d~aGv 214 (316)
.|+++++++||+|++++|.+...++++++.++++++..++ .+-|+
T Consensus 109 ~dl~~al~~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 109 PDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp SCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSC
T ss_pred CCHHHHHhcCCEEEEECChhhhHHHHHHhccccCCCceeEEecccc
Confidence 5889999999999999999999999999999999998776 44565
No 163
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.09 E-value=7.3e-06 Score=77.13 Aligned_cols=82 Identities=16% Similarity=0.125 Sum_probs=59.1
Q ss_pred CEEEEEcccchHHHHHHHHH-hhhhhhcCCcEEEEEecCC-cccHHHHHHCCceecCCCcCCHHhhhcc--CCEEEEccc
Q 021218 112 NQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEENGTLGDIYETISG--SDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr-~~~~~~g~G~~Vivg~r~~-~~s~~~A~~~G~~~~~~t~~~~~e~i~~--ADIViLavp 187 (316)
++|||||+|.||..+++.++ +. .+.+++...+++ ++..+.+.+.|+.. ....+.++++++ .|+|++++|
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~-----~~~~l~av~d~~~~~~~~~~~~~g~~~--~~~~~~~~ll~~~~~D~V~i~tp 75 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKL-----SGAEIVAVTDVNQEAAQKVVEQYQLNA--TVYPNDDSLLADENVDAVLVTSW 75 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTC-----SSEEEEEEECSSHHHHHHHHHHTTCCC--EEESSHHHHHHCTTCCEEEECSC
T ss_pred EEEEEECccHHHHHHHHHHHhhC-----CCcEEEEEEcCCHHHHHHHHHHhCCCC--eeeCCHHHHhcCCCCCEEEECCC
Confidence 58999999999999999998 42 156655444444 33445566777310 025689999876 899999999
Q ss_pred CchHHHHHHHHHh
Q 021218 188 DAAQADNYEKIFS 200 (316)
Q Consensus 188 ~~~~~~vi~ei~~ 200 (316)
+..+.+++.+.+.
T Consensus 76 ~~~h~~~~~~al~ 88 (344)
T 3mz0_A 76 GPAHESSVLKAIK 88 (344)
T ss_dssp GGGHHHHHHHHHH
T ss_pred chhHHHHHHHHHH
Confidence 9999887775543
No 164
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=98.08 E-value=4.6e-06 Score=80.04 Aligned_cols=100 Identities=14% Similarity=0.096 Sum_probs=69.2
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH-CCcee--cCCCcCCHHhhhccCCEE
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTE--ENGTLGDIYETISGSDLV 182 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~-~G~~~--~~~t~~~~~e~i~~ADIV 182 (316)
..++| ++++|+|.|.+|.++++.++.. |.+|++.+++. ...+.+.+ .|... ......+++++++++|+|
T Consensus 162 ~~l~~-~~V~ViGaG~iG~~~a~~l~~~------Ga~V~~~d~~~-~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvV 233 (369)
T 2eez_A 162 PGVAP-ASVVILGGGTVGTNAAKIALGM------GAQVTILDVNH-KRLQYLDDVFGGRVITLTATEANIKKSVQHADLL 233 (369)
T ss_dssp TBBCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH-HHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEE
T ss_pred CCCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCH-HHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEE
Confidence 46889 9999999999999999999999 99887776653 33344433 44320 000122466788999999
Q ss_pred EEcccCch-HH-HH-HHHHHhcCCCCcEEEEeCC
Q 021218 183 LLLISDAA-QA-DN-YEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 183 iLavp~~~-~~-~v-i~ei~~~mk~gaiLid~aG 213 (316)
|.+++... .. .+ .++.++.||++.+|++++.
T Consensus 234 i~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~ 267 (369)
T 2eez_A 234 IGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAV 267 (369)
T ss_dssp EECCC-------CCSCHHHHTTSCTTCEEEECC-
T ss_pred EECCCCCccccchhHHHHHHHhhcCCCEEEEEec
Confidence 99998654 22 23 3577889999999988763
No 165
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.06 E-value=2e-05 Score=66.28 Aligned_cols=115 Identities=10% Similarity=0.050 Sum_probs=76.2
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEccc
Q 021218 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~----G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp 187 (316)
++|+|||. |.+|..++++|++. |++| +........ -.|... ..+++|+....|++++++|
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~------G~~v-~~Vnp~~~~-----i~G~~~----y~sl~~l~~~vDlvvi~vp 86 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEH------GYDV-YPVNPKYEE-----VLGRKC----YPSVLDIPDKIEVVDLFVK 86 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT------TCEE-EEECTTCSE-----ETTEEC----BSSGGGCSSCCSEEEECSC
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHC------CCEE-EEECCCCCe-----ECCeec----cCCHHHcCCCCCEEEEEeC
Confidence 89999999 79999999999998 9874 333322111 145552 4578888888999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEeCCchhhhhhccccCCCCCccEEEeccCCCchhhHHHH
Q 021218 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~gaiLid~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf 248 (316)
+....+++++..+.-. ..+ +...|..-..+.+ ..-..+++++ .||+++-...+++
T Consensus 87 ~~~~~~vv~~~~~~gi-~~i-~~~~g~~~~~l~~--~a~~~Gi~vv--Gpnc~gv~~~~~~ 141 (144)
T 2d59_A 87 PKLTMEYVEQAIKKGA-KVV-WFQYNTYNREASK--KADEAGLIIV--ANRCMMREHERLL 141 (144)
T ss_dssp HHHHHHHHHHHHHHTC-SEE-EECTTCCCHHHHH--HHHHTTCEEE--ESCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-CEE-EECCCchHHHHHH--HHHHcCCEEE--cCCchhhcchhhc
Confidence 9888899987665432 334 4445543221111 0112356655 4999887766554
No 166
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.04 E-value=1.2e-05 Score=74.91 Aligned_cols=86 Identities=15% Similarity=0.172 Sum_probs=61.3
Q ss_pred CEEEEEcccchHHHH-HHHHHhhhhhhcCCcEEEEEecCCc-ccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEccc
Q 021218 112 NQIGVIGWGSQGPAQ-AQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~Al-A~~Lr~~~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLavp 187 (316)
++|||||+|.||..+ +..+++. +.+++...+++. +..+.+.+.|... ...+.+++++ ++|+|++++|
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~------~~~~vav~d~~~~~~~~~~~~~g~~~---~~~~~~~~l~~~~~D~V~i~tp 71 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRAT------GGEVVSMMSTSAERGAAYATENGIGK---SVTSVEELVGDPDVDAVYVSTT 71 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHT------TCEEEEEECSCHHHHHHHHHHTTCSC---CBSCHHHHHTCTTCCEEEECSC
T ss_pred CeEEEEcccHHHHHhhhHHhhcC------CCeEEEEECCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEEeCC
Confidence 479999999999998 8788765 777654444443 3334566667631 2568889886 5999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEE
Q 021218 188 DAAQADNYEKIFSCMKPNSILG 209 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~gaiLi 209 (316)
+..+.+++.+.+ +.|+.|+
T Consensus 72 ~~~h~~~~~~al---~~Gk~v~ 90 (332)
T 2glx_A 72 NELHREQTLAAI---RAGKHVL 90 (332)
T ss_dssp GGGHHHHHHHHH---HTTCEEE
T ss_pred hhHhHHHHHHHH---HCCCeEE
Confidence 999888776543 3466443
No 167
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.04 E-value=3.3e-05 Score=60.04 Aligned_cols=92 Identities=16% Similarity=0.056 Sum_probs=62.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-cEEEEEecCCcccHHHHHHCCceecCCCcC---CHHhhhccCCEEEEccc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLG---DIYETISGSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G-~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~---~~~e~i~~ADIViLavp 187 (316)
++|.|+|.|.||.++++.|.+. | ++|++..++ +...+.....++........ +..++++++|+||.++|
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~------g~~~v~~~~r~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~ 78 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTS------SNYSVTVADHD-LAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAP 78 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC------SSEEEEEEESC-HHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCceEEEEeCC-HHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCC
Confidence 8999999999999999999998 8 777776665 33344444445321111122 34567889999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 188 DAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
......++..... .|.-.+|.++
T Consensus 79 ~~~~~~~~~~~~~---~g~~~~~~~~ 101 (118)
T 3ic5_A 79 FFLTPIIAKAAKA---AGAHYFDLTE 101 (118)
T ss_dssp GGGHHHHHHHHHH---TTCEEECCCS
T ss_pred chhhHHHHHHHHH---hCCCEEEecC
Confidence 8776666665433 4555666554
No 168
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.03 E-value=2e-05 Score=69.24 Aligned_cols=94 Identities=13% Similarity=0.075 Sum_probs=61.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCC---HHhh-hccCCEEEEccc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYET-ISGSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~---~~e~-i~~ADIViLavp 187 (316)
|+|.|||+|.+|..+|+.|.+. |++|++.+++.+...+.+...|+..-.+...+ +.++ ++++|+|+++++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~------g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR------KYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT------TCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence 5799999999999999999998 98887776654333333444554221111223 2333 788999999999
Q ss_pred CchHHHHHHHHHhc-CCCCcEEEEe
Q 021218 188 DAAQADNYEKIFSC-MKPNSILGLS 211 (316)
Q Consensus 188 ~~~~~~vi~ei~~~-mk~gaiLid~ 211 (316)
+.....++...... .....++.-+
T Consensus 75 ~d~~n~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 75 RDEVNLFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEECC
T ss_pred CcHHHHHHHHHHHHHcCCCeEEEEE
Confidence 98877666655544 3333444433
No 169
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.01 E-value=1.5e-05 Score=75.01 Aligned_cols=89 Identities=22% Similarity=0.291 Sum_probs=57.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCcccHHHHHH--CC------ceecCCCcCCHHhhhccCCE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG------FTEENGTLGDIYETISGSDL 181 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~~s~~~A~~--~G------~~~~~~t~~~~~e~i~~ADI 181 (316)
|||+|||.|+||.++|..|... |+ +|.+.+++.++....+.. .+ .... ..+ .+.+++||+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~------g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~---~~d-~~~~~~aDv 70 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMK------GFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY---AGD-YADLKGSDV 70 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE---ECC-GGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE---eCC-HHHhCCCCE
Confidence 5899999999999999999988 87 777766553222222211 11 1110 124 467899999
Q ss_pred EEEcccCch----------------HHHHHHHHHhcCCCCcEEEEe
Q 021218 182 VLLLISDAA----------------QADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 182 ViLavp~~~----------------~~~vi~ei~~~mk~gaiLid~ 211 (316)
||+++|... ..++++++.++. |+++++.+
T Consensus 71 Viiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~ 115 (319)
T 1a5z_A 71 VIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVV 115 (319)
T ss_dssp EEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred EEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEe
Confidence 999999644 134555666654 66665543
No 170
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.00 E-value=9.8e-06 Score=76.52 Aligned_cols=80 Identities=10% Similarity=0.135 Sum_probs=59.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCc-ccHHHHHHCCceecCCCcCCHHhhh--ccCCEEEEcccC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETI--SGSDLVLLLISD 188 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~t~~~~~e~i--~~ADIViLavp~ 188 (316)
.+|||||+|.||..++.++++. .+.+++...+++. +..+.+.+.|+.. ..+.++++ .+.|+|++++|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~-----~~~~lvav~d~~~~~~~~~~~~~g~~~----~~~~~~~l~~~~~D~V~i~tp~ 76 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKS-----EKLKLVTCYSRTEDKREKFGKRYNCAG----DATMEALLAREDVEMVIITVPN 76 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-----SSEEEEEEECSSHHHHHHHHHHHTCCC----CSSHHHHHHCSSCCEEEECSCT
T ss_pred ceEEEEccCHHHHHHHHHHHhC-----CCcEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHHhcCCCCCEEEEeCCh
Confidence 4899999999999999998764 1566554444443 3334556667653 56899999 679999999999
Q ss_pred chHHHHHHHHHh
Q 021218 189 AAQADNYEKIFS 200 (316)
Q Consensus 189 ~~~~~vi~ei~~ 200 (316)
..+.+++.+.+.
T Consensus 77 ~~h~~~~~~al~ 88 (354)
T 3db2_A 77 DKHAEVIEQCAR 88 (354)
T ss_dssp TSHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999887765543
No 171
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.99 E-value=1.8e-05 Score=75.32 Aligned_cols=86 Identities=12% Similarity=0.140 Sum_probs=63.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEcccCc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLavp~~ 189 (316)
.+|||||+|.||...++.+++. .+.+++...+.+....+.+.+.|+.. ..+.+++++ +.|+|++|+|+.
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~a~~~g~~~----~~~~~~ll~~~~~D~V~i~tp~~ 76 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAA-----DNLEVHGVFDILAEKREAAAQKGLKI----YESYEAVLADEKVDAVLIATPND 76 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTS-----TTEEEEEEECSSHHHHHHHHTTTCCB----CSCHHHHHHCTTCCEEEECSCGG
T ss_pred CcEEEECcCHHHHHHHHHHHhC-----CCcEEEEEEcCCHHHHHHHHhcCCce----eCCHHHHhcCCCCCEEEEcCCcH
Confidence 5799999999999999988875 14566544555555555666777753 578999987 789999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEE
Q 021218 190 AQADNYEKIFSCMKPNSILG 209 (316)
Q Consensus 190 ~~~~vi~ei~~~mk~gaiLi 209 (316)
.+.++..+.+. .|+-|.
T Consensus 77 ~h~~~~~~al~---aGkhVl 93 (359)
T 3e18_A 77 SHKELAISALE---AGKHVV 93 (359)
T ss_dssp GHHHHHHHHHH---TTCEEE
T ss_pred HHHHHHHHHHH---CCCCEE
Confidence 99887765544 455433
No 172
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.99 E-value=2.1e-05 Score=73.01 Aligned_cols=87 Identities=15% Similarity=0.149 Sum_probs=60.9
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEE-EEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCc
Q 021218 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (316)
Q Consensus 112 kkIGIIG~G~mG~A-lA~~Lr~~~~~~g~G~~Vi-vg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~ 189 (316)
++|||||+|.||.. +++.+.+. .+.+++ +.+++.++..+.+.+.|+.. ..+.+++..+.|+|++++|+.
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~-----~~~~lvav~d~~~~~~~~~~~~~g~~~----~~~~~~l~~~~D~V~i~tp~~ 76 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAA-----SDWTLQGAWSPTRAKALPICESWRIPY----ADSLSSLAASCDAVFVHSSTA 76 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSC-----SSEEEEEEECSSCTTHHHHHHHHTCCB----CSSHHHHHTTCSEEEECSCTT
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-----CCeEEEEEECCCHHHHHHHHHHcCCCc----cCcHHHhhcCCCEEEEeCCch
Confidence 68999999999997 88888763 156665 44444444445566667542 456776667899999999999
Q ss_pred hHHHHHHHHHhcCCCCc-EEEE
Q 021218 190 AQADNYEKIFSCMKPNS-ILGL 210 (316)
Q Consensus 190 ~~~~vi~ei~~~mk~ga-iLid 210 (316)
.+.+++.+.+. .|+ +++.
T Consensus 77 ~h~~~~~~al~---~G~~v~~e 95 (319)
T 1tlt_A 77 SHFDVVSTLLN---AGVHVCVD 95 (319)
T ss_dssp HHHHHHHHHHH---TTCEEEEE
T ss_pred hHHHHHHHHHH---cCCeEEEe
Confidence 98887765443 465 4444
No 173
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.98 E-value=6.3e-05 Score=74.75 Aligned_cols=159 Identities=14% Similarity=0.175 Sum_probs=96.5
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHH-------------------HHHHCCceecCCCcCC
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFA-------------------EARAAGFTEENGTLGD 171 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~-------------------~A~~~G~~~~~~t~~~ 171 (316)
|.+|+|||+|-+|..+|..+.+. |++|+ +.|.+++..+ .+.+.|... ...+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~------G~~V~-g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~---~tt~ 90 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL------GHRVV-GYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLS---FAES 90 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCEEE-EECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEE---ECSS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC------CCcEE-EEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCee---EEcC
Confidence 47999999999999999999988 99864 6665543322 222333211 1357
Q ss_pred HHhhhccCCEEEEcccCc----------hHHHHHHHHHhcCC---CCcEEEEeC----Cchhh----hhhccccCCCCCc
Q 021218 172 IYETISGSDLVLLLISDA----------AQADNYEKIFSCMK---PNSILGLSH----GFLLG----HLQSMGLDFPKNI 230 (316)
Q Consensus 172 ~~e~i~~ADIViLavp~~----------~~~~vi~ei~~~mk---~gaiLid~a----Gv~l~----~l~~~~~~~~~~i 230 (316)
.++++++||++|+|+|-. ......+.+.++|+ ++++|++-+ |.+-. .+++ . ..+.
T Consensus 91 ~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~---~-~~~~ 166 (444)
T 3vtf_A 91 AEEAVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAE---E-AGGV 166 (444)
T ss_dssp HHHHHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHT---T-TTTC
T ss_pred HHHHHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHH---h-CCCC
Confidence 888999999999998721 22335566777775 577887654 33311 2222 1 1233
Q ss_pred cE-EEecc--CCCchhhHHHHhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCCCeeecChh
Q 021218 231 GV-IAVCP--KGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLE 295 (316)
Q Consensus 231 ~v-I~vhP--n~pg~~~r~lf~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~~~~~tT~~ 295 (316)
+| |...| --||..+.++...-| .++- ..++++.+.+..+.+.+..+.+ .++++
T Consensus 167 ~f~v~~~PErl~eG~a~~d~~~~~r--------iViG---~~~~~a~~~~~~ly~~~~~~~~-~~~~~ 222 (444)
T 3vtf_A 167 KFSVASNPEFLREGSALEDFFKPDR--------IVIG---AGDERAASFLLDVYKAVDAPKL-VMKPR 222 (444)
T ss_dssp CCEEEECCCCCCTTSHHHHHHSCSC--------EEEE---ESSHHHHHHHHHHTTTSCSCEE-EECHH
T ss_pred CceeecCcccccCCccccccccCCc--------EEEc---CCCHHHHHHHHHHHhccCCCEE-Eechh
Confidence 43 55666 245666666555421 1122 2345788888888888875543 44443
No 174
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.98 E-value=1.3e-05 Score=74.98 Aligned_cols=87 Identities=11% Similarity=0.090 Sum_probs=60.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCCcccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEcccC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vi-vg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLavp~ 188 (316)
.+|||||+|.||..++..+++. .+.+++ +.+++.++..+.+.+.|+.. ...+.+++++ +.|+|++++|+
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~-----~~~~~~av~d~~~~~~~~~a~~~~~~~---~~~~~~~ll~~~~~D~V~i~tp~ 77 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLA-----GNGEVVAVSSRTLESAQAFANKYHLPK---AYDKLEDMLADESIDVIYVATIN 77 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHH-----CSEEEEEEECSCSSTTCC---CCCCSC---EESCHHHHHTCTTCCEEEECSCG
T ss_pred eEEEEEechHHHHHHHHHHHhC-----CCcEEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEECCCc
Confidence 6899999999999999999875 034544 34444344444556666531 2568999998 79999999999
Q ss_pred chHHHHHHHHHhcCCCCcEEE
Q 021218 189 AAQADNYEKIFSCMKPNSILG 209 (316)
Q Consensus 189 ~~~~~vi~ei~~~mk~gaiLi 209 (316)
..+.+++.+.+. .|+-|+
T Consensus 78 ~~h~~~~~~al~---aGk~Vl 95 (329)
T 3evn_A 78 QDHYKVAKAALL---AGKHVL 95 (329)
T ss_dssp GGHHHHHHHHHH---TTCEEE
T ss_pred HHHHHHHHHHHH---CCCeEE
Confidence 999887765543 455433
No 175
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.98 E-value=1.5e-05 Score=79.99 Aligned_cols=93 Identities=19% Similarity=0.198 Sum_probs=72.8
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEc
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLa 185 (316)
..|.| ++++|+|+|.||.++|+.|+.. |.+|++.+++ +.....+...|+. ..+.+++++.+|+|+.+
T Consensus 261 ~~L~G-KtVvVtGaGgIG~aiA~~Laa~------GA~Viv~D~~-~~~a~~Aa~~g~d-----v~~lee~~~~aDvVi~a 327 (488)
T 3ond_A 261 VMIAG-KVAVVAGYGDVGKGCAAALKQA------GARVIVTEID-PICALQATMEGLQ-----VLTLEDVVSEADIFVTT 327 (488)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCGGGTTTTCSEEEEC
T ss_pred CcccC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCC-HHHHHHHHHhCCc-----cCCHHHHHHhcCEEEeC
Confidence 45899 9999999999999999999999 9988776554 3344566677765 35788999999999987
Q ss_pred ccCchHHHHH-HHHHhcCCCCcEEEEeCCc
Q 021218 186 ISDAAQADNY-EKIFSCMKPNSILGLSHGF 214 (316)
Q Consensus 186 vp~~~~~~vi-~ei~~~mk~gaiLid~aGv 214 (316)
..... ++ .+.+..||++.+|++++..
T Consensus 328 tG~~~---vl~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 328 TGNKD---IIMLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp SSCSC---SBCHHHHTTSCTTEEEEESSST
T ss_pred CCChh---hhhHHHHHhcCCCeEEEEcCCC
Confidence 65332 34 3578889999999987643
No 176
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.96 E-value=4.6e-06 Score=78.11 Aligned_cols=95 Identities=15% Similarity=0.163 Sum_probs=68.0
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCCc---eecCCCcCCHHhhhccCCEE
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGF---TEENGTLGDIYETISGSDLV 182 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~---~~~~~t~~~~~e~i~~ADIV 182 (316)
+++| +++.|||.|.||.+++..|.+. |. +|.+.+|+.++..+.+.+.+. ... ...+..+.++++|+|
T Consensus 138 ~l~~-~~vlVlGaGg~g~aia~~L~~~------G~~~V~v~nR~~~ka~~la~~~~~~~~~~~--~~~~~~~~~~~aDiv 208 (297)
T 2egg_A 138 TLDG-KRILVIGAGGGARGIYFSLLST------AAERIDMANRTVEKAERLVREGDERRSAYF--SLAEAETRLAEYDII 208 (297)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHTT------TCSEEEEECSSHHHHHHHHHHSCSSSCCEE--CHHHHHHTGGGCSEE
T ss_pred CCCC-CEEEEECcHHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHHHhhhccCcee--eHHHHHhhhccCCEE
Confidence 5789 9999999999999999999998 87 888888876555556665543 110 012456778899999
Q ss_pred EEcccCchHHH----HHHHHHhcCCCCcEEEEeC
Q 021218 183 LLLISDAAQAD----NYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 183 iLavp~~~~~~----vi~ei~~~mk~gaiLid~a 212 (316)
|.++|...... .+. .+.++++.+++|+.
T Consensus 209 In~t~~~~~~~~~~~~i~--~~~l~~~~~v~D~~ 240 (297)
T 2egg_A 209 INTTSVGMHPRVEVQPLS--LERLRPGVIVSDII 240 (297)
T ss_dssp EECSCTTCSSCCSCCSSC--CTTCCTTCEEEECC
T ss_pred EECCCCCCCCCCCCCCCC--HHHcCCCCEEEEcC
Confidence 99999765321 111 23467788888764
No 177
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.96 E-value=1.4e-05 Score=74.51 Aligned_cols=88 Identities=17% Similarity=0.098 Sum_probs=59.0
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhh-ccCCEEEEcccCc
Q 021218 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISDA 189 (316)
Q Consensus 112 kkIGIIG~G~mG~-AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i-~~ADIViLavp~~ 189 (316)
++|||||+|.||. .+++++++. .+.++++.+++.++..+.+.+.|+.. ...+..+.+ +++|+|++++|+.
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~-----~~~~l~v~d~~~~~~~~~a~~~g~~~---~~~~~~~~l~~~~D~V~i~tp~~ 74 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQW-----PDIELVLCTRNPKVLGTLATRYRVSA---TCTDYRDVLQYGVDAVMIHAATD 74 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTS-----TTEEEEEECSCHHHHHHHHHHTTCCC---CCSSTTGGGGGCCSEEEECSCGG
T ss_pred cEEEEECCCHHHHHHHHHHHHhC-----CCceEEEEeCCHHHHHHHHHHcCCCc---cccCHHHHhhcCCCEEEEECCch
Confidence 6899999999998 599988763 15666644444333444566677541 022444555 7899999999999
Q ss_pred hHHHHHHHHHhcCCCCc-EEEE
Q 021218 190 AQADNYEKIFSCMKPNS-ILGL 210 (316)
Q Consensus 190 ~~~~vi~ei~~~mk~ga-iLid 210 (316)
.+.+++.+.+. .|+ +++.
T Consensus 75 ~h~~~~~~al~---~Gk~V~~E 93 (323)
T 1xea_A 75 VHSTLAAFFLH---LGIPTFVD 93 (323)
T ss_dssp GHHHHHHHHHH---TTCCEEEE
T ss_pred hHHHHHHHHHH---CCCeEEEe
Confidence 98887765443 354 4444
No 178
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=97.95 E-value=2.1e-05 Score=73.02 Aligned_cols=97 Identities=19% Similarity=0.157 Sum_probs=59.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCcccHHHHH--HCCceec-CC--CcCCHHhhhccCCEEEE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR--AAGFTEE-NG--TLGDIYETISGSDLVLL 184 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~~s~~~A~--~~G~~~~-~~--t~~~~~e~i~~ADIViL 184 (316)
|||+|||.|.||.++|..|... |+ +|.+.+++.......+. ..+.... +. ...+..+.++++|+||+
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~------g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii 81 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR------GIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVI 81 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEE
Confidence 8999999999999999999888 87 87766654322211122 2222100 00 01112457889999999
Q ss_pred cccCchHH----------------HHHHHHHhcCCCCcEEE-EeCCch
Q 021218 185 LISDAAQA----------------DNYEKIFSCMKPNSILG-LSHGFL 215 (316)
Q Consensus 185 avp~~~~~----------------~vi~ei~~~mk~gaiLi-d~aGv~ 215 (316)
+++..... ++++++.++ .++++|+ ..-|+.
T Consensus 82 ~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~~ 128 (319)
T 1lld_A 82 TAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPVD 128 (319)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCchH
Confidence 99533221 455566664 5777665 455654
No 179
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.94 E-value=2.3e-05 Score=74.48 Aligned_cols=81 Identities=20% Similarity=0.279 Sum_probs=59.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEE-EecCCcccHHHHHHCCc--eecCCCcCCHHhhhc--cCCEEEEcc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGF--TEENGTLGDIYETIS--GSDLVLLLI 186 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Viv-g~r~~~~s~~~A~~~G~--~~~~~t~~~~~e~i~--~ADIViLav 186 (316)
.+|||||+|.||...++.+.... .+.+++. .++..++..+.+.+.|+ .. ..+.+++++ +.|+|++++
T Consensus 24 ~rvgiIG~G~~g~~~~~~l~~~~----~~~~lvav~d~~~~~~~~~a~~~g~~~~~----~~~~~~ll~~~~~D~V~i~t 95 (357)
T 3ec7_A 24 LKAGIVGIGMIGSDHLRRLANTV----SGVEVVAVCDIVAGRAQAALDKYAIEAKD----YNDYHDLINDKDVEVVIITA 95 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTC----TTEEEEEEECSSTTHHHHHHHHHTCCCEE----ESSHHHHHHCTTCCEEEECS
T ss_pred eeEEEECCcHHHHHHHHHHHhhC----CCcEEEEEEeCCHHHHHHHHHHhCCCCee----eCCHHHHhcCCCCCEEEEcC
Confidence 58999999999999999998321 1566653 44444444456667773 32 568999987 589999999
Q ss_pred cCchHHHHHHHHHh
Q 021218 187 SDAAQADNYEKIFS 200 (316)
Q Consensus 187 p~~~~~~vi~ei~~ 200 (316)
|+..+.++..+.+.
T Consensus 96 p~~~h~~~~~~al~ 109 (357)
T 3ec7_A 96 SNEAHADVAVAALN 109 (357)
T ss_dssp CGGGHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHH
Confidence 99999887776544
No 180
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.94 E-value=8.7e-06 Score=77.04 Aligned_cols=94 Identities=14% Similarity=0.029 Sum_probs=65.0
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCC---ceecCCCcCCHHhhhccCCEEEEc
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG---FTEENGTLGDIYETISGSDLVLLL 185 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G---~~~~~~t~~~~~e~i~~ADIViLa 185 (316)
.. ++++|||.|.||.++++.+.+. ....+|.+++|+.++..+.+.+.+ +.. . ..+.++++ ++|+|++|
T Consensus 124 ~~-~~v~iIGaG~~a~~~~~al~~~----~~~~~V~v~~r~~~~a~~la~~~~~~~~~~--~-~~~~~e~v-~aDvVi~a 194 (322)
T 1omo_A 124 NS-SVFGFIGCGTQAYFQLEALRRV----FDIGEVKAYDVREKAAKKFVSYCEDRGISA--S-VQPAEEAS-RCDVLVTT 194 (322)
T ss_dssp TC-CEEEEECCSHHHHHHHHHHHHH----SCCCEEEEECSSHHHHHHHHHHHHHTTCCE--E-ECCHHHHT-SSSEEEEC
T ss_pred CC-CEEEEEcCcHHHHHHHHHHHHh----CCccEEEEECCCHHHHHHHHHHHHhcCceE--E-ECCHHHHh-CCCEEEEe
Confidence 35 8999999999999999999873 002367777776554444444322 111 1 35788999 99999999
Q ss_pred ccCchHHHHHHHHHhcCCCCcEEEEeCCch
Q 021218 186 ISDAAQADNYEKIFSCMKPNSILGLSHGFL 215 (316)
Q Consensus 186 vp~~~~~~vi~ei~~~mk~gaiLid~aGv~ 215 (316)
+|... .++. .+.+++|++|.+++.+.
T Consensus 195 Tp~~~--pv~~--~~~l~~G~~V~~ig~~~ 220 (322)
T 1omo_A 195 TPSRK--PVVK--AEWVEEGTHINAIGADG 220 (322)
T ss_dssp CCCSS--CCBC--GGGCCTTCEEEECSCCS
T ss_pred eCCCC--ceec--HHHcCCCeEEEECCCCC
Confidence 99753 2222 25689999998886553
No 181
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.91 E-value=3.7e-05 Score=71.91 Aligned_cols=87 Identities=13% Similarity=0.152 Sum_probs=60.9
Q ss_pred CEEEEEcccchHHHHHHHHH-hhhhhhcCCcEEEEEecCCcccH-HHHHHCCceecCCCcCCHHhhhc--cCCEEEEccc
Q 021218 112 NQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGSRSF-AEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr-~~~~~~g~G~~Vivg~r~~~~s~-~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLavp 187 (316)
++|||||+|.||..+++.++ +. .+.+++...++++... +.+.+.|... ...+.+++++ ++|+|++++|
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~-----~~~~~vav~d~~~~~~~~~a~~~g~~~---~~~~~~~~l~~~~~D~V~i~tp 80 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKI-----QGVKLVAACALDSNQLEWAKNELGVET---TYTNYKDMIDTENIDAIFIVAP 80 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTC-----SSEEEEEEECSCHHHHHHHHHTTCCSE---EESCHHHHHTTSCCSEEEECSC
T ss_pred ceEEEEcCCHHHHHHHHHHHhcC-----CCcEEEEEecCCHHHHHHHHHHhCCCc---ccCCHHHHhcCCCCCEEEEeCC
Confidence 68999999999999999988 42 1566554444444333 4455567621 1468889886 6999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEE
Q 021218 188 DAAQADNYEKIFSCMKPNSILG 209 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~gaiLi 209 (316)
+..+.++..+.+ +.|+.|+
T Consensus 81 ~~~h~~~~~~al---~~G~~v~ 99 (346)
T 3cea_A 81 TPFHPEMTIYAM---NAGLNVF 99 (346)
T ss_dssp GGGHHHHHHHHH---HTTCEEE
T ss_pred hHhHHHHHHHHH---HCCCEEE
Confidence 999888766543 3466443
No 182
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.91 E-value=2e-05 Score=74.75 Aligned_cols=80 Identities=15% Similarity=0.136 Sum_probs=59.7
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEEE-EEecCCcccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEccc
Q 021218 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~-AlA~~Lr~~~~~~g~G~~Vi-vg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLavp 187 (316)
++|||||+|.||. .++..+++. .+.+++ +.++..++..+.+.+.|+.. ..+.+|+++ +.|+|++++|
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~g~~~----~~~~~~ll~~~~~D~V~i~tp 98 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAE-----PLTEVTAIASRRWDRAKRFTERFGGEP----VEGYPALLERDDVDAVYVPLP 98 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHC-----TTEEEEEEEESSHHHHHHHHHHHCSEE----EESHHHHHTCTTCSEEEECCC
T ss_pred eEEEEEcCcHHHHHHHHHHHHhC-----CCeEEEEEEcCCHHHHHHHHHHcCCCC----cCCHHHHhcCCCCCEEEECCC
Confidence 6899999999998 789988875 145655 34444344445566678764 468999986 5899999999
Q ss_pred CchHHHHHHHHHh
Q 021218 188 DAAQADNYEKIFS 200 (316)
Q Consensus 188 ~~~~~~vi~ei~~ 200 (316)
+..+.+++.+.+.
T Consensus 99 ~~~h~~~~~~al~ 111 (350)
T 3rc1_A 99 AVLHAEWIDRALR 111 (350)
T ss_dssp GGGHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 9999887776544
No 183
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.90 E-value=3.2e-05 Score=64.83 Aligned_cols=117 Identities=13% Similarity=0.078 Sum_probs=75.0
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEccc
Q 021218 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~----G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp 187 (316)
++|+|||. |.+|..++++|++. |++|+ ..... +.. ..-.|... ..++.|+-...|++++++|
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~------G~~v~-~vnp~-~~~--~~i~G~~~----~~sl~el~~~vDlavi~vp 79 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQ------GYRVL-PVNPR-FQG--EELFGEEA----VASLLDLKEPVDILDVFRP 79 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHT------TCEEE-EECGG-GTT--SEETTEEC----BSSGGGCCSCCSEEEECSC
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHC------CCEEE-EeCCC-ccc--CcCCCEEe----cCCHHHCCCCCCEEEEEeC
Confidence 89999999 89999999999998 98743 32221 000 00135542 4578888888999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEeCCchhhhhhccccCCCCCccEEEeccCCCchhhHHHH
Q 021218 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~gaiLid~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~r~lf 248 (316)
+....+++++..+.-- +.+++..+....+..+. .-..++.++ .||+++-...++.
T Consensus 80 ~~~~~~v~~~~~~~gi-~~i~~~~g~~~~~~~~~---a~~~Gir~v--gpnc~g~~~~~~~ 134 (140)
T 1iuk_A 80 PSALMDHLPEVLALRP-GLVWLQSGIRHPEFEKA---LKEAGIPVV--ADRCLMVEHKRLF 134 (140)
T ss_dssp HHHHTTTHHHHHHHCC-SCEEECTTCCCHHHHHH---HHHTTCCEE--ESCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-CEEEEcCCcCHHHHHHH---HHHcCCEEE--cCCccceEChhhc
Confidence 9888888887665432 34554433333222111 112356665 4888887755544
No 184
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.90 E-value=2.5e-06 Score=79.70 Aligned_cols=96 Identities=11% Similarity=0.080 Sum_probs=63.7
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEE
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViL 184 (316)
.+++| +++.|||.|-+|.+++..|.+. |. +|.+.+|+.++..+.+.+.... ...+..++++++|+||.
T Consensus 113 ~~l~~-k~vlvlGaGg~g~aia~~L~~~------G~~~v~v~~R~~~~a~~la~~~~~~----~~~~~~~~~~~aDiVIn 181 (277)
T 3don_A 113 EGIED-AYILILGAGGASKGIANELYKI------VRPTLTVANRTMSRFNNWSLNINKI----NLSHAESHLDEFDIIIN 181 (277)
T ss_dssp TTGGG-CCEEEECCSHHHHHHHHHHHTT------CCSCCEEECSCGGGGTTCCSCCEEE----CHHHHHHTGGGCSEEEE
T ss_pred CCcCC-CEEEEECCcHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHHhcccc----cHhhHHHHhcCCCEEEE
Confidence 36789 9999999999999999999998 87 7888888755433322211111 12356677889999999
Q ss_pred cccCchHHHHHHH-HHhcCCCCcEEEEeC
Q 021218 185 LISDAAQADNYEK-IFSCMKPNSILGLSH 212 (316)
Q Consensus 185 avp~~~~~~vi~e-i~~~mk~gaiLid~a 212 (316)
++|.....+.-.. -.+.++++.+|+|+.
T Consensus 182 aTp~Gm~~~~~~~l~~~~l~~~~~V~D~v 210 (277)
T 3don_A 182 TTPAGMNGNTDSVISLNRLASHTLVSDIV 210 (277)
T ss_dssp CCC-------CCSSCCTTCCSSCEEEESC
T ss_pred CccCCCCCCCcCCCCHHHcCCCCEEEEec
Confidence 9997643321000 134578899998874
No 185
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.89 E-value=1.3e-06 Score=80.31 Aligned_cols=100 Identities=15% Similarity=0.010 Sum_probs=66.1
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEc
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLa 185 (316)
.++| +++|||.|.||.+++..|.+. |. +|.+.+|+.++..+.+.+.+... ..++.++++++|+||.+
T Consensus 106 ~~~~--~vliiGaGg~a~ai~~~L~~~------G~~~I~v~nR~~~ka~~la~~~~~~~----~~~~~~~~~~aDiVIna 173 (253)
T 3u62_A 106 EVKE--PVVVVGAGGAARAVIYALLQM------GVKDIWVVNRTIERAKALDFPVKIFS----LDQLDEVVKKAKSLFNT 173 (253)
T ss_dssp CCCS--SEEEECCSHHHHHHHHHHHHT------TCCCEEEEESCHHHHHTCCSSCEEEE----GGGHHHHHHTCSEEEEC
T ss_pred CCCC--eEEEECcHHHHHHHHHHHHHc------CCCEEEEEeCCHHHHHHHHHHcccCC----HHHHHhhhcCCCEEEEC
Confidence 4556 899999999999999999998 87 78888876443222222222221 34677889999999999
Q ss_pred ccCchHH--HHHHHHHhcCCCCcEEEEeCCchhhhhh
Q 021218 186 ISDAAQA--DNYEKIFSCMKPNSILGLSHGFLLGHLQ 220 (316)
Q Consensus 186 vp~~~~~--~vi~ei~~~mk~gaiLid~aGv~l~~l~ 220 (316)
+|..... ..+. .+.++++++|+|+.--...+++
T Consensus 174 tp~gm~p~~~~i~--~~~l~~~~~V~Divy~~T~ll~ 208 (253)
T 3u62_A 174 TSVGMKGEELPVS--DDSLKNLSLVYDVIYFDTPLVV 208 (253)
T ss_dssp SSTTTTSCCCSCC--HHHHTTCSEEEECSSSCCHHHH
T ss_pred CCCCCCCCCCCCC--HHHhCcCCEEEEeeCCCcHHHH
Confidence 9864321 1121 1235788898875422544444
No 186
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.86 E-value=5.8e-05 Score=70.70 Aligned_cols=90 Identities=23% Similarity=0.167 Sum_probs=58.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHH---------CCceecCCCcCCHHhhhccCCE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA---------AGFTEENGTLGDIYETISGSDL 181 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~---------~G~~~~~~t~~~~~e~i~~ADI 181 (316)
++|+|||.|.||.++|..|... |+ +|.+.+++.+.....+.+ ...... ...+. +.+++||+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~------g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~--~t~d~-~a~~~aDi 75 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD------NLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVI--GTDDY-ADISGSDV 75 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEE--EESCG-GGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEE--ECCCH-HHhCCCCE
Confidence 7999999999999999999988 87 877666654322211110 011100 12455 78899999
Q ss_pred EEEccc--------------Cch--HHHHHHHHHhcCCCCcEEEEe
Q 021218 182 VLLLIS--------------DAA--QADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 182 ViLavp--------------~~~--~~~vi~ei~~~mk~gaiLid~ 211 (316)
||++++ .+. ..++++++.++. |+++++.+
T Consensus 76 Vi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~-~~~iii~~ 120 (317)
T 2ewd_A 76 VIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYC-PNAFVICI 120 (317)
T ss_dssp EEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEEC
T ss_pred EEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEe
Confidence 999993 222 234666777764 57776644
No 187
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.85 E-value=1.3e-05 Score=74.46 Aligned_cols=86 Identities=13% Similarity=0.096 Sum_probs=57.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEcccCc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLavp~~ 189 (316)
++|||||+|.||..+++.+++. .+.+++...++++...+...+. +. ...+.+++++ ++|+|++++|+.
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~-----~~~~~v~v~d~~~~~~~~~~~~-~~----~~~~~~~~l~~~~~D~V~i~tp~~ 80 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGL-----PGAALVRLASSNPDNLALVPPG-CV----IESDWRSVVSAPEVEAVIIATPPA 80 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHC-----TTEEEEEEEESCHHHHTTCCTT-CE----EESSTHHHHTCTTCCEEEEESCGG
T ss_pred ceEEEECCcHHHHHHHHHHHhC-----CCcEEEEEEeCCHHHHHHHHhh-Cc----ccCCHHHHhhCCCCCEEEEeCChH
Confidence 6899999999999999999874 0456554444433222111111 22 1457888885 799999999999
Q ss_pred hHHHHHHHHHhcCCCCcE-EEE
Q 021218 190 AQADNYEKIFSCMKPNSI-LGL 210 (316)
Q Consensus 190 ~~~~vi~ei~~~mk~gai-Lid 210 (316)
.+.+++.+.+ +.|+. ++.
T Consensus 81 ~h~~~~~~al---~~Gk~v~~e 99 (315)
T 3c1a_A 81 THAEITLAAI---ASGKAVLVE 99 (315)
T ss_dssp GHHHHHHHHH---HTTCEEEEE
T ss_pred HHHHHHHHHH---HCCCcEEEc
Confidence 9988777543 34653 444
No 188
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.83 E-value=5e-05 Score=71.00 Aligned_cols=86 Identities=17% Similarity=0.187 Sum_probs=56.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCchH
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~~ 191 (316)
.+|||||+|+||..+++.+++. .+++++...++++... ++.|+.. ....++.+. .++|+|++|+|+..+
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~-----~~~elvav~d~~~~~~---~~~g~~~--~~~~~l~~~-~~~DvViiatp~~~h 78 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREA-----PDFEIAGIVRRNPAEV---PFELQPF--RVVSDIEQL-ESVDVALVCSPSREV 78 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECC----------CCTTS--CEESSGGGS-SSCCEEEECSCHHHH
T ss_pred CEEEEECChHHHHHHHHHHhcC-----CCCEEEEEEcCCHHHH---HHcCCCc--CCHHHHHhC-CCCCEEEECCCchhh
Confidence 5899999999999999999874 1567653344443322 2255431 113355554 789999999999998
Q ss_pred HHHHHHHHhcCCCCcEEEEe
Q 021218 192 ADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 192 ~~vi~ei~~~mk~gaiLid~ 211 (316)
.++..+.+ +.|..+++.
T Consensus 79 ~~~~~~al---~aG~~Vi~e 95 (304)
T 3bio_A 79 ERTALEIL---KKGICTADS 95 (304)
T ss_dssp HHHHHHHH---TTTCEEEEC
T ss_pred HHHHHHHH---HcCCeEEEC
Confidence 87776544 457766664
No 189
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.82 E-value=4.2e-05 Score=71.40 Aligned_cols=92 Identities=14% Similarity=0.236 Sum_probs=67.7
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEcccC
Q 021218 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (316)
Q Consensus 112 kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLavp~ 188 (316)
.+|+|||+ |.||..+++++++. |++++...++.... ....|+.. +.+.+|+.+ +.|++++++|+
T Consensus 8 ~rVaViG~sG~~G~~~~~~l~~~------g~~~V~~V~p~~~g---~~~~G~~v----y~sl~el~~~~~~D~viI~tP~ 74 (288)
T 2nu8_A 8 TKVICQGFTGSQGTFHSEQAIAY------GTKMVGGVTPGKGG---TTHLGLPV----FNTVREAVAATGATASVIYVPA 74 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTT---CEETTEEE----ESSHHHHHHHHCCCEEEECCCG
T ss_pred CEEEEECCCChHHHHHHHHHHHC------CCeEEEEeCCCccc---ceeCCeec----cCCHHHHhhcCCCCEEEEecCH
Confidence 78999998 99999999999988 88865555543110 01356553 567888887 89999999999
Q ss_pred chHHHHHHHHHhcCCCCcEEEEeCCchhh
Q 021218 189 AAQADNYEKIFSCMKPNSILGLSHGFLLG 217 (316)
Q Consensus 189 ~~~~~vi~ei~~~mk~gaiLid~aGv~l~ 217 (316)
..+.+++.+..+.= ...+|+...|+...
T Consensus 75 ~~~~~~~~ea~~~G-i~~iVi~t~G~~~~ 102 (288)
T 2nu8_A 75 PFCKDSILEAIDAG-IKLIITITEGIPTL 102 (288)
T ss_dssp GGHHHHHHHHHHTT-CSEEEECCCCCCHH
T ss_pred HHHHHHHHHHHHCC-CCEEEEECCCCCHH
Confidence 99999888766532 23345577788643
No 190
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.81 E-value=2.4e-05 Score=75.72 Aligned_cols=71 Identities=15% Similarity=0.098 Sum_probs=52.6
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhc-cCCEEEEc
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLL 185 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~-~ADIViLa 185 (316)
+|+| ++|+|+|+|+||..+|+.|.+. |++|++.+++.++..+.+.+.|.. ..+.++++. +||+++.|
T Consensus 170 ~L~G-ktV~V~G~G~VG~~~A~~L~~~------GakVvv~D~~~~~l~~~a~~~ga~-----~v~~~~ll~~~~DIvip~ 237 (364)
T 1leh_A 170 SLEG-LAVSVQGLGNVAKALCKKLNTE------GAKLVVTDVNKAAVSAAVAEEGAD-----AVAPNAIYGVTCDIFAPC 237 (364)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHHHHHHHHHHHCCE-----ECCGGGTTTCCCSEEEEC
T ss_pred CCCc-CEEEEECchHHHHHHHHHHHHC------CCEEEEEcCCHHHHHHHHHHcCCE-----EEChHHHhccCCcEeecc
Confidence 7999 9999999999999999999999 999886655433333455555654 225556655 89999988
Q ss_pred ccCc
Q 021218 186 ISDA 189 (316)
Q Consensus 186 vp~~ 189 (316)
...+
T Consensus 238 a~~~ 241 (364)
T 1leh_A 238 ALGA 241 (364)
T ss_dssp SCSC
T ss_pred chHH
Confidence 6443
No 191
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.81 E-value=3.2e-05 Score=72.44 Aligned_cols=89 Identities=11% Similarity=0.080 Sum_probs=61.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCC-cccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEcccC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~-~~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLavp~ 188 (316)
.+|||||+|.||...++.+++. . +.+.+++...+++ ++..+.+.+.|+.. ...+.+++++ +.|+|++++|+
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~-~--~~~~~l~av~d~~~~~a~~~a~~~~~~~---~~~~~~~ll~~~~vD~V~i~tp~ 76 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTL-P--RSEHQVVAVAARDLSRAKEFAQKHDIPK---AYGSYEELAKDPNVEVAYVGTQH 76 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS-C--TTTEEEEEEECSSHHHHHHHHHHHTCSC---EESSHHHHHHCTTCCEEEECCCG
T ss_pred cEEEEECchHHHHHHHHHHHhC-C--CCCeEEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEECCCc
Confidence 6899999999999999988764 0 0124544433443 34445666677631 1568999987 69999999999
Q ss_pred chHHHHHHHHHhcCCCCcEEE
Q 021218 189 AAQADNYEKIFSCMKPNSILG 209 (316)
Q Consensus 189 ~~~~~vi~ei~~~mk~gaiLi 209 (316)
..+.++..+.+. .|+-|.
T Consensus 77 ~~H~~~~~~al~---~GkhVl 94 (334)
T 3ohs_X 77 PQHKAAVMLCLA---AGKAVL 94 (334)
T ss_dssp GGHHHHHHHHHH---TTCEEE
T ss_pred HHHHHHHHHHHh---cCCEEE
Confidence 999887766544 355433
No 192
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.77 E-value=6.6e-05 Score=71.02 Aligned_cols=90 Identities=12% Similarity=0.134 Sum_probs=61.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCC-cccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEcccC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~-~~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLavp~ 188 (316)
++|||||+|.||..+++.+... .+.+++...+++ ++..+.+.+.|+........+.+++++ +.|+|++++|+
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~-----~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 81 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLA-----PNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPT 81 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHC-----TTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCG
T ss_pred eEEEEECchHHHHHHHHHHhhC-----CCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCCh
Confidence 6899999999999999998864 145654334443 333455666774100001468889886 59999999999
Q ss_pred chHHHHHHHHHhcCCCCcEEE
Q 021218 189 AAQADNYEKIFSCMKPNSILG 209 (316)
Q Consensus 189 ~~~~~vi~ei~~~mk~gaiLi 209 (316)
..+.+++.+. ++.|+.|+
T Consensus 82 ~~h~~~~~~a---l~aGk~V~ 99 (362)
T 1ydw_A 82 SLHVEWAIKA---AEKGKHIL 99 (362)
T ss_dssp GGHHHHHHHH---HTTTCEEE
T ss_pred HHHHHHHHHH---HHCCCeEE
Confidence 9988877654 34566444
No 193
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.76 E-value=5.9e-05 Score=70.70 Aligned_cols=86 Identities=17% Similarity=0.228 Sum_probs=59.9
Q ss_pred cCCCCEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEE-EecCCcccHHHHHHCCceecCCCcCCHHhhhc--cCCEEE
Q 021218 108 FNGINQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVL 183 (316)
Q Consensus 108 l~G~kkIGIIG~G~mG~A-lA~~Lr~~~~~~g~G~~Viv-g~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIVi 183 (316)
++.|.+|||||+|.||.. .+..+++. .+.+++. .+++.++..+.+++.|+.. .+.+.+|+++ +.|+|+
T Consensus 20 ~~~mirigiIG~G~ig~~~~~~~~~~~-----~~~~lvav~d~~~~~a~~~a~~~g~~~---~y~d~~ell~~~~iDaV~ 91 (350)
T 4had_A 20 FQSMLRFGIISTAKIGRDNVVPAIQDA-----ENCVVTAIASRDLTRAREMADRFSVPH---AFGSYEEMLASDVIDAVY 91 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHC-----SSEEEEEEECSSHHHHHHHHHHHTCSE---EESSHHHHHHCSSCSEEE
T ss_pred ccCccEEEEEcChHHHHHHHHHHHHhC-----CCeEEEEEECCCHHHHHHHHHHcCCCe---eeCCHHHHhcCCCCCEEE
Confidence 356679999999999986 46666664 1456553 3444344556677788642 2568999885 579999
Q ss_pred EcccCchHHHHHHHHHhc
Q 021218 184 LLISDAAQADNYEKIFSC 201 (316)
Q Consensus 184 Lavp~~~~~~vi~ei~~~ 201 (316)
+++|+..+.++..+.++.
T Consensus 92 I~tP~~~H~~~~~~al~a 109 (350)
T 4had_A 92 IPLPTSQHIEWSIKAADA 109 (350)
T ss_dssp ECSCGGGHHHHHHHHHHT
T ss_pred EeCCCchhHHHHHHHHhc
Confidence 999999999877765443
No 194
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.75 E-value=2.8e-05 Score=73.23 Aligned_cols=85 Identities=9% Similarity=0.167 Sum_probs=56.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCchH
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~~ 191 (316)
.+|+|||+|+||..+++.+.+. .+++++...+++... +.+ .|+.. ..+.++++.++|+|++++|+..+
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~-----~~~elvav~d~~~~~-~~~--~gv~~----~~d~~~ll~~~DvViiatp~~~h 71 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQ-----PDMDLVGIFSRRATL-DTK--TPVFD----VADVDKHADDVDVLFLCMGSATD 71 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-----SSEEEEEEEESSSCC-SSS--SCEEE----GGGGGGTTTTCSEEEECSCTTTH
T ss_pred CEEEEEeecHHHHHHHHHHhcC-----CCCEEEEEEcCCHHH-hhc--CCCce----eCCHHHHhcCCCEEEEcCCcHHH
Confidence 5899999999999999998765 145654333333222 111 45442 35677777899999999999887
Q ss_pred HHHHHHHHhcCCCCcEEEEe
Q 021218 192 ADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 192 ~~vi~ei~~~mk~gaiLid~ 211 (316)
.+.+.. .++.|..+++.
T Consensus 72 ~~~~~~---al~aG~~Vv~e 88 (320)
T 1f06_A 72 IPEQAP---KFAQFACTVDT 88 (320)
T ss_dssp HHHHHH---HHTTTSEEECC
T ss_pred HHHHHH---HHHCCCEEEEC
Confidence 655443 34457766543
No 195
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=97.75 E-value=6.2e-05 Score=71.06 Aligned_cols=118 Identities=13% Similarity=0.193 Sum_probs=80.9
Q ss_pred cCCCCEEEEE-cc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhc--cCCEEE
Q 021218 108 FNGINQIGVI-GW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVL 183 (316)
Q Consensus 108 l~G~kkIGII-G~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIVi 183 (316)
+.- ++++|| |. |++|..+++++++. |+++++..++.... ..-.|+.. ..+++|+.+ ..|+++
T Consensus 11 ~~~-~siaVV~Gasg~~G~~~~~~l~~~------G~~~v~~VnP~~~g---~~i~G~~v----y~sl~el~~~~~vD~av 76 (305)
T 2fp4_A 11 VDK-NTKVICQGFTGKQGTFHSQQALEY------GTNLVGGTTPGKGG---KTHLGLPV----FNTVKEAKEQTGATASV 76 (305)
T ss_dssp CCT-TCEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTT---CEETTEEE----ESSHHHHHHHHCCCEEE
T ss_pred hCC-CcEEEEECCCCCHHHHHHHHHHHC------CCcEEEEeCCCcCc---ceECCeee----echHHHhhhcCCCCEEE
Confidence 344 889999 98 99999999999999 99866566554211 01256653 457888888 899999
Q ss_pred EcccCchHHHHHHHHHhcCCCCcEEEEeCCchhhh---hhccccCCCCCc-cEEEeccCCCchhh
Q 021218 184 LLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGH---LQSMGLDFPKNI-GVIAVCPKGMGPSV 244 (316)
Q Consensus 184 Lavp~~~~~~vi~ei~~~mk~gaiLid~aGv~l~~---l~~~~~~~~~~i-~vI~vhPn~pg~~~ 244 (316)
+++|+....+++++..+. .-..+|+..+|+.... +.. .. ... .+..+.||++|...
T Consensus 77 I~vP~~~~~~~~~e~i~~-Gi~~iv~~t~G~~~~~~~~l~~---~a-~~~~gi~liGPnc~Gii~ 136 (305)
T 2fp4_A 77 IYVPPPFAAAAINEAIDA-EVPLVVCITEGIPQQDMVRVKH---RL-LRQGKTRLIGPNCPGVIN 136 (305)
T ss_dssp ECCCHHHHHHHHHHHHHT-TCSEEEECCCCCCHHHHHHHHH---HH-TTCSSCEEECSSSCEEEE
T ss_pred EecCHHHHHHHHHHHHHC-CCCEEEEECCCCChHHHHHHHH---HH-HhcCCcEEEeCCCCeEec
Confidence 999999999999876553 2345677889986432 221 11 122 33346688777653
No 196
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.74 E-value=5.7e-05 Score=70.64 Aligned_cols=91 Identities=15% Similarity=0.242 Sum_probs=68.4
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEcccC
Q 021218 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (316)
Q Consensus 112 kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLavp~ 188 (316)
++|+|+|. |.||..+++++++. |+++++...+.... ....|+.. +.+++|+.+ ++|++++++|+
T Consensus 8 ~~VaVvGasG~~G~~~~~~l~~~------g~~~v~~VnP~~~g---~~i~G~~v----y~sl~el~~~~~~Dv~Ii~vp~ 74 (288)
T 1oi7_A 8 TRVLVQGITGREGQFHTKQMLTY------GTKIVAGVTPGKGG---MEVLGVPV----YDTVKEAVAHHEVDASIIFVPA 74 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTT---CEETTEEE----ESSHHHHHHHSCCSEEEECCCH
T ss_pred CEEEEECCCCCHHHHHHHHHHHc------CCeEEEEECCCCCC---ceECCEEe----eCCHHHHhhcCCCCEEEEecCH
Confidence 78999998 99999999999998 88866565543210 01246653 467888888 89999999999
Q ss_pred chHHHHHHHHHhcCCCCcEEEEeCCchh
Q 021218 189 AAQADNYEKIFSCMKPNSILGLSHGFLL 216 (316)
Q Consensus 189 ~~~~~vi~ei~~~mk~gaiLid~aGv~l 216 (316)
....+++++..+. .-..+|+...|+..
T Consensus 75 ~~~~~~~~ea~~~-Gi~~vVi~t~G~~~ 101 (288)
T 1oi7_A 75 PAAADAALEAAHA-GIPLIVLITEGIPT 101 (288)
T ss_dssp HHHHHHHHHHHHT-TCSEEEECCSCCCH
T ss_pred HHHHHHHHHHHHC-CCCEEEEECCCCCH
Confidence 9999999876653 22346667888864
No 197
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.74 E-value=7.3e-05 Score=69.94 Aligned_cols=92 Identities=20% Similarity=0.228 Sum_probs=55.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCcccHHHHHHC--Ccee-cCC--CcCCHHhhhccCCEEEE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAA--GFTE-ENG--TLGDIYETISGSDLVLL 184 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~~s~~~A~~~--G~~~-~~~--t~~~~~e~i~~ADIViL 184 (316)
|||+|||.|.||.++|..|... |+ +|.+.+++..+....+.+. +... .+. +..+ .+.+++||+||+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~------g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~-~~a~~~aDvVIi 73 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR------GSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGG-HSELADAQVVIL 73 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEEC-GGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECC-HHHhCCCCEEEE
Confidence 5899999999999999999887 77 7766665432222222221 1100 000 0123 467899999999
Q ss_pred cccCchH----------------HHHHHHHHhcCCCCcEEEEe
Q 021218 185 LISDAAQ----------------ADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 185 avp~~~~----------------~~vi~ei~~~mk~gaiLid~ 211 (316)
+++.... .++++++.++ .|+++++.+
T Consensus 74 ~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~ 115 (304)
T 2v6b_A 74 TAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVT 115 (304)
T ss_dssp CC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEEC
T ss_pred cCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEe
Confidence 9954331 2344556665 577776654
No 198
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.72 E-value=9.4e-06 Score=75.80 Aligned_cols=94 Identities=14% Similarity=0.064 Sum_probs=66.0
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCCc---eecCCCcCCHHhhhccCCE
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGF---TEENGTLGDIYETISGSDL 181 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~---~~~~~t~~~~~e~i~~ADI 181 (316)
.+++| +++.|||.|-+|.+++..|.+. |. +|.+.+|+.++..+.+.+.+- .. ..+.+++.+++|+
T Consensus 122 ~~l~~-k~vlvlGaGg~g~aia~~L~~~------G~~~v~v~~R~~~~a~~la~~~~~~~~~~----~~~~~~l~~~aDi 190 (281)
T 3o8q_A 122 VLLKG-ATILLIGAGGAARGVLKPLLDQ------QPASITVTNRTFAKAEQLAELVAAYGEVK----AQAFEQLKQSYDV 190 (281)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHTT------CCSEEEEEESSHHHHHHHHHHHGGGSCEE----EEEGGGCCSCEEE
T ss_pred CCccC-CEEEEECchHHHHHHHHHHHhc------CCCeEEEEECCHHHHHHHHHHhhccCCee----EeeHHHhcCCCCE
Confidence 35789 9999999999999999999998 96 888888876555555554331 11 2245555589999
Q ss_pred EEEcccCchHHHH--HHHHHhcCCCCcEEEEeC
Q 021218 182 VLLLISDAAQADN--YEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 182 ViLavp~~~~~~v--i~ei~~~mk~gaiLid~a 212 (316)
||.++|.....+. ++ .+.++++.+|+|+.
T Consensus 191 IInaTp~gm~~~~~~l~--~~~l~~~~~V~Dlv 221 (281)
T 3o8q_A 191 IINSTSASLDGELPAID--PVIFSSRSVCYDMM 221 (281)
T ss_dssp EEECSCCCC----CSCC--GGGEEEEEEEEESC
T ss_pred EEEcCcCCCCCCCCCCC--HHHhCcCCEEEEec
Confidence 9999998765331 11 23467777888764
No 199
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.72 E-value=0.00024 Score=58.90 Aligned_cols=96 Identities=13% Similarity=0.006 Sum_probs=61.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccH---HHHHHCCceecCCCcCC---HHhh-hccCCEEEE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF---AEARAAGFTEENGTLGD---IYET-ISGSDLVLL 184 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~---~~A~~~G~~~~~~t~~~---~~e~-i~~ADIViL 184 (316)
++|.|+|+|.+|..+++.|.+. |++|++.+++.++.. +.....|+..-.+...+ +.++ ++++|+|++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~------g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR------GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEE
Confidence 6899999999999999999998 988877776533222 22223343221111222 2334 789999999
Q ss_pred cccCchHHHHHHHHHhcCCC-CcEEEEeCC
Q 021218 185 LISDAAQADNYEKIFSCMKP-NSILGLSHG 213 (316)
Q Consensus 185 avp~~~~~~vi~ei~~~mk~-gaiLid~aG 213 (316)
++++......+......+.+ ..++..+..
T Consensus 78 ~~~~d~~n~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 78 LSDNDADNAFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp CSSCHHHHHHHHHHHHHHTSSSCEEEECSS
T ss_pred ecCChHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 99988766555555544433 345554544
No 200
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.72 E-value=0.00019 Score=67.07 Aligned_cols=87 Identities=11% Similarity=0.041 Sum_probs=61.9
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEEE-EEecCCcccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEccc
Q 021218 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~-AlA~~Lr~~~~~~g~G~~Vi-vg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLavp 187 (316)
.+|||||+|.+|. .++..++.. +.+++ +.+++.++..+.+.+.+... ...+.+++++ +.|+|++++|
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~------~~~lvav~d~~~~~~~~~a~~~~~~~---~~~~~~~ll~~~~~D~V~i~tp 75 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDA------GAELAGVFESDSDNRAKFTSLFPSVP---FAASAEQLITDASIDLIACAVI 75 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHT------TCEEEEEECSCTTSCHHHHHHSTTCC---BCSCHHHHHTCTTCCEEEECSC
T ss_pred cEEEEECCChHHHHHhhhhhcCC------CcEEEEEeCCCHHHHHHHHHhcCCCc---ccCCHHHHhhCCCCCEEEEeCC
Confidence 6899999999996 677777655 77754 45555555556677774321 2568999986 6899999999
Q ss_pred CchHHHHHHHHHhcCCCCc-EEEE
Q 021218 188 DAAQADNYEKIFSCMKPNS-ILGL 210 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~ga-iLid 210 (316)
+..+.++..+.++ .|+ +++.
T Consensus 76 ~~~h~~~~~~al~---aGkhVl~E 96 (336)
T 2p2s_A 76 PCDRAELALRTLD---AGKDFFTA 96 (336)
T ss_dssp GGGHHHHHHHHHH---TTCEEEEC
T ss_pred hhhHHHHHHHHHH---CCCcEEEe
Confidence 9998887665443 465 4443
No 201
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.71 E-value=0.00014 Score=66.72 Aligned_cols=152 Identities=11% Similarity=0.066 Sum_probs=90.2
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCch
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~ 190 (316)
|+||+|+|+|.||..+++.+.+. +.+++...+++.. ...|+.. ..++++++ ++|+||-.+.|+.
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~------~~eLva~~d~~~~-----~~~gv~v----~~dl~~l~-~~DVvIDft~p~a 66 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK------GHEIVGVIENTPK-----ATTPYQQ----YQHIADVK-GADVAIDFSNPNL 66 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEECSSCC-------CCSCB----CSCTTTCT-TCSEEEECSCHHH
T ss_pred ceEEEEECcCHHHHHHHHHHHhC------CCEEEEEEecCcc-----ccCCCce----eCCHHHHh-CCCEEEEeCChHH
Confidence 58999999999999999999887 5554444454332 1356653 45778887 9999997887776
Q ss_pred HHHHHHHHHhcCCCCc-EEEEeCCchhhhhhccccCCCCCccEEEeccCCCchhh--HHHHh-cCccccCCCceEEEeec
Q 021218 191 QADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSV--RRLYV-QGKEINGAGINSSFAVH 266 (316)
Q Consensus 191 ~~~vi~ei~~~mk~ga-iLid~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~--r~lf~-~G~e~~G~G~~~iiap~ 266 (316)
..+.+. ++.|. +|+-..|+....++..... -+.+++ -..||+.--.. -.+-+ ..+-+.++.+ -++--|
T Consensus 67 ~~~~~~-----l~~g~~vVigTTG~s~e~~~~l~~a-a~~~~v-~~a~N~S~Gv~l~~~~~~~aa~~l~~~di-eI~E~H 138 (243)
T 3qy9_A 67 LFPLLD-----EDFHLPLVVATTGEKEKLLNKLDEL-SQNMPV-FFSANMSYGVHALTKILAAAVPLLDDFDI-ELTEAH 138 (243)
T ss_dssp HHHHHT-----SCCCCCEEECCCSSHHHHHHHHHHH-TTTSEE-EECSSCCHHHHHHHHHHHHHHHHTTTSEE-EEEEEE
T ss_pred HHHHHH-----HhcCCceEeCCCCCCHHHHHHHHHH-HhcCCE-EEECCccHHHHHHHHHHHHHHHhcCCCCE-EEEEcC
Confidence 655553 55565 4555668764333211112 234444 67888865431 00000 0111111212 123333
Q ss_pred c-----CCCHHHHHHHHHHHHHcCCC
Q 021218 267 Q-----DVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 267 ~-----d~~~~a~e~a~~l~~alG~~ 287 (316)
. -.++.|+.+++.+ +.+|..
T Consensus 139 H~~K~DaPSGTA~~la~~i-~~~~~~ 163 (243)
T 3qy9_A 139 HNKKVDAPSGTLEKLYDVI-VSLKEN 163 (243)
T ss_dssp CTTCCSSSCHHHHHHHHHH-HHHSTT
T ss_pred CCCCCCCCCHHHHHHHHHH-HhcCcc
Confidence 3 2679999999999 998854
No 202
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.71 E-value=3.2e-05 Score=74.52 Aligned_cols=94 Identities=15% Similarity=0.101 Sum_probs=63.1
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCC-CcCCHHhhhccCCEEEEccc
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG-TLGDIYETISGSDLVLLLIS 187 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~-t~~~~~e~i~~ADIViLavp 187 (316)
.+ ++|+|||+|.||.++++.|.+. .+|.+++|+.++..+.+.+.+...-|- ...++.++++++|+||.|+|
T Consensus 15 ~~-~~v~IiGaG~iG~~ia~~L~~~-------~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P 86 (365)
T 2z2v_A 15 RH-MKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALP 86 (365)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCC
T ss_pred CC-CeEEEEcCCHHHHHHHHHHHcC-------CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCC
Confidence 46 8999999999999999998764 467888776443333332222111010 11346788999999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 188 DAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
+.....+... .++.|+.++|.+.
T Consensus 87 ~~~~~~v~~a---~l~~G~~~vD~s~ 109 (365)
T 2z2v_A 87 GFLGFKSIKA---AIKSKVDMVDVSF 109 (365)
T ss_dssp HHHHHHHHHH---HHHTTCCEEECCC
T ss_pred hhhhHHHHHH---HHHhCCeEEEccC
Confidence 8876665543 3456777888764
No 203
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.65 E-value=0.00015 Score=64.20 Aligned_cols=94 Identities=12% Similarity=0.202 Sum_probs=62.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHH---hh-hccCCEEEEccc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY---ET-ISGSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~---e~-i~~ADIViLavp 187 (316)
++|.|+|+|.+|..+++.|.+. |+ |++.++ ++...+.+. .|+..-.+...+.+ ++ ++++|.|+++++
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~------g~-v~vid~-~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGS------EV-FVLAED-ENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLE 80 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTS------EE-EEEESC-GGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred CEEEEECCChHHHHHHHHHHhC------Ce-EEEEEC-CHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence 7899999999999999999888 87 665544 444444444 66432112222332 33 789999999999
Q ss_pred CchHHHHHHHHHhcCCCC-cEEEEeCCc
Q 021218 188 DAAQADNYEKIFSCMKPN-SILGLSHGF 214 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~g-aiLid~aGv 214 (316)
+......+......+.++ .++..+..-
T Consensus 81 ~d~~n~~~~~~a~~~~~~~~iia~~~~~ 108 (234)
T 2aef_A 81 SDSETIHCILGIRKIDESVRIIAEAERY 108 (234)
T ss_dssp CHHHHHHHHHHHHHHCSSSEEEEECSSG
T ss_pred CcHHHHHHHHHHHHHCCCCeEEEEECCH
Confidence 886665555555556666 566666543
No 204
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.63 E-value=0.00014 Score=68.03 Aligned_cols=87 Identities=9% Similarity=0.048 Sum_probs=60.3
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhh----------ccC
Q 021218 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI----------SGS 179 (316)
Q Consensus 111 ~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i----------~~A 179 (316)
|++|||||+ |.||...+..+++. +.+++...+.++.....++..+... ...+.++++ ++.
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~------~~~lvav~d~~~~~~~~~~~~~~~~---~~~~~~~ll~~~~~l~~~~~~v 73 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV------GGVLVASLDPATNVGLVDSFFPEAE---FFTEPEAFEAYLEDLRDRGEGV 73 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT------TCEEEEEECSSCCCGGGGGTCTTCE---EESCHHHHHHHHHHHHHTTCCC
T ss_pred ceEEEEECCChHHHHHHHHHHHhC------CCEEEEEEcCCHHHHHHHhhCCCCc---eeCCHHHHHHHhhhhcccCCCC
Confidence 589999999 78999999999987 7766555554443322223322211 246788877 679
Q ss_pred CEEEEcccCchHHHHHHHHHhcCCCCcEEE
Q 021218 180 DLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (316)
Q Consensus 180 DIViLavp~~~~~~vi~ei~~~mk~gaiLi 209 (316)
|+|++++|+..+.++..+.+. .|+-|.
T Consensus 74 D~V~I~tP~~~H~~~~~~al~---aGkhVl 100 (312)
T 3o9z_A 74 DYLSIASPNHLHYPQIRMALR---LGANAL 100 (312)
T ss_dssp SEEEECSCGGGHHHHHHHHHH---TTCEEE
T ss_pred cEEEECCCchhhHHHHHHHHH---CCCeEE
Confidence 999999999999887776544 355443
No 205
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.62 E-value=6.9e-05 Score=71.82 Aligned_cols=80 Identities=13% Similarity=0.160 Sum_probs=59.7
Q ss_pred CEEEEEccc-chHHHHHHHHHhhhhhhcCCcEEEEEecCCc-ccHHHHHHCCceecCCCcCCHHhhhcc--CCEEEEccc
Q 021218 112 NQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISG--SDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G-~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~t~~~~~e~i~~--ADIViLavp 187 (316)
++|||||+| .||..++.++++. .+.+++...+.+. +..+.+.+.|+.. ..+.+|++++ .|+|++++|
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~g~~~----~~~~~ell~~~~vD~V~i~tp 73 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHH-----PDAQIVAACDPNEDVRERFGKEYGIPV----FATLAEMMQHVQMDAVYIASP 73 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHC-----TTEEEEEEECSCHHHHHHHHHHHTCCE----ESSHHHHHHHSCCSEEEECSC
T ss_pred eEEEEEeCCHHHHHHHHHHHHhC-----CCeEEEEEEeCCHHHHHHHHHHcCCCe----ECCHHHHHcCCCCCEEEEcCC
Confidence 689999999 9999999999875 1456554444443 3344566667753 5689999874 999999999
Q ss_pred CchHHHHHHHHHh
Q 021218 188 DAAQADNYEKIFS 200 (316)
Q Consensus 188 ~~~~~~vi~ei~~ 200 (316)
+..+.++..+.+.
T Consensus 74 ~~~H~~~~~~al~ 86 (387)
T 3moi_A 74 HQFHCEHVVQASE 86 (387)
T ss_dssp GGGHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 9998887765544
No 206
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.62 E-value=0.00024 Score=67.44 Aligned_cols=93 Identities=12% Similarity=0.060 Sum_probs=59.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHH-------CCceecCCCcCCHHhhhccCCEEE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA-------AGFTEENGTLGDIYETISGSDLVL 183 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~-------~G~~~~~~t~~~~~e~i~~ADIVi 183 (316)
+||+|||.|.+|.++|..|... |+ +|.+.+++.+.....+.. .+....-....+.++.+++||+||
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~------g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi 83 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR------ELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVI 83 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEE
Confidence 6999999999999999999988 87 866665553322111111 111100001257877899999999
Q ss_pred Ecc--cCch-------------------HHHHHHHHHhcCCCCcEEEEe
Q 021218 184 LLI--SDAA-------------------QADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 184 Lav--p~~~-------------------~~~vi~ei~~~mk~gaiLid~ 211 (316)
+++ |... ..++++++.++. |+++++.+
T Consensus 84 ~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~ 131 (331)
T 1pzg_A 84 VTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVV 131 (331)
T ss_dssp ECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred EccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEE
Confidence 998 5321 223455566654 77777655
No 207
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.60 E-value=0.0004 Score=65.82 Aligned_cols=89 Identities=19% Similarity=0.132 Sum_probs=56.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHH----------CCceecCCCcCCHHhhhccCC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA----------AGFTEENGTLGDIYETISGSD 180 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~----------~G~~~~~~t~~~~~e~i~~AD 180 (316)
+||+|||.|.||.++|..+... |+ +|.+.+++.+.....+.. ..-+. ...+. +.+++||
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~------g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~---~t~d~-~al~~aD 84 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK------DLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIF---GENNY-EYLQNSD 84 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEE---EESCG-GGGTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEE---ECCCH-HHHCCCC
Confidence 6999999999999999999888 87 866665543322211111 11111 12466 7899999
Q ss_pred EEEEcc--cCc-------------h-HHHHHHHHHhcCCCCcEEEEe
Q 021218 181 LVLLLI--SDA-------------A-QADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 181 IViLav--p~~-------------~-~~~vi~ei~~~mk~gaiLid~ 211 (316)
+||+++ |.. . ..++++++.++. |+++++.+
T Consensus 85 ~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~ 130 (328)
T 2hjr_A 85 VVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICI 130 (328)
T ss_dssp EEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred EEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 999998 431 1 223455566654 77776554
No 208
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.60 E-value=5.6e-05 Score=69.37 Aligned_cols=94 Identities=21% Similarity=0.095 Sum_probs=63.7
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCc---eecCCCcCCHHhhh-ccCCEE
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF---TEENGTLGDIYETI-SGSDLV 182 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~---~~~~~t~~~~~e~i-~~ADIV 182 (316)
+++| +++.|+|.|.||.++++.|.+. |.+|++.+|+.++..+.+.+.+. .. ..+.+++. .++|+|
T Consensus 116 ~l~~-k~vlViGaGg~g~a~a~~L~~~------G~~V~v~~R~~~~~~~la~~~~~~~~~~----~~~~~~~~~~~~Div 184 (271)
T 1nyt_A 116 IRPG-LRILLIGAGGASRGVLLPLLSL------DCAVTITNRTVSRAEELAKLFAHTGSIQ----ALSMDELEGHEFDLI 184 (271)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSHHHHHHHHHHTGGGSSEE----ECCSGGGTTCCCSEE
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHc------CCEEEEEECCHHHHHHHHHHhhccCCee----EecHHHhccCCCCEE
Confidence 5789 9999999999999999999998 88888887765544455555432 11 12333433 589999
Q ss_pred EEcccCchHHHHHHHH-HhcCCCCcEEEEeC
Q 021218 183 LLLISDAAQADNYEKI-FSCMKPNSILGLSH 212 (316)
Q Consensus 183 iLavp~~~~~~vi~ei-~~~mk~gaiLid~a 212 (316)
|.++|.....++ ..+ ...++++.+++|+.
T Consensus 185 Vn~t~~~~~~~~-~~i~~~~l~~~~~v~D~~ 214 (271)
T 1nyt_A 185 INATSSGISGDI-PAIPSSLIHPGIYCYDMF 214 (271)
T ss_dssp EECCSCGGGTCC-CCCCGGGCCTTCEEEESC
T ss_pred EECCCCCCCCCC-CCCCHHHcCCCCEEEEec
Confidence 999997664221 011 12356777777754
No 209
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.59 E-value=0.00016 Score=67.78 Aligned_cols=82 Identities=10% Similarity=0.081 Sum_probs=57.7
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhh-----------cc
Q 021218 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-----------SG 178 (316)
Q Consensus 111 ~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i-----------~~ 178 (316)
|++|||||+ |.||...+.++++. +.+++...+.++.....+...+... ...+.++++ ++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~------~~~lvav~d~~~~~~~~~~~~~~~~---~~~~~~~ll~~~~~l~~~~~~~ 73 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT------GNCLVSAYDINDSVGIIDSISPQSE---FFTEFEFFLDHASNLKRDSATA 73 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT------TCEEEEEECSSCCCGGGGGTCTTCE---EESSHHHHHHHHHHHTTSTTTS
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC------CCEEEEEEcCCHHHHHHHhhCCCCc---EECCHHHHHHhhhhhhhccCCC
Confidence 589999999 79999999999987 7766555554443322223322211 145777776 57
Q ss_pred CCEEEEcccCchHHHHHHHHHhc
Q 021218 179 SDLVLLLISDAAQADNYEKIFSC 201 (316)
Q Consensus 179 ADIViLavp~~~~~~vi~ei~~~ 201 (316)
.|+|++++|+..+.++..+.+..
T Consensus 74 vD~V~I~tP~~~H~~~~~~al~a 96 (318)
T 3oa2_A 74 LDYVSICSPNYLHYPHIAAGLRL 96 (318)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHT
T ss_pred CcEEEECCCcHHHHHHHHHHHHC
Confidence 89999999999998877765443
No 210
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=97.58 E-value=0.00011 Score=70.88 Aligned_cols=89 Identities=17% Similarity=0.171 Sum_probs=61.7
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhc-cCCEEEE
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLL 184 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~-~ADIViL 184 (316)
.+|+| ++++|+|+|++|..+|+.++.+ |++|++.+. +....+.+.+.|.. ..+.++++. +||+++-
T Consensus 171 ~~L~G-ktV~I~G~GnVG~~~A~~l~~~------GakVvvsD~-~~~~~~~a~~~ga~-----~v~~~ell~~~~DIliP 237 (355)
T 1c1d_A 171 GSLDG-LTVLVQGLGAVGGSLASLAAEA------GAQLLVADT-DTERVAHAVALGHT-----AVALEDVLSTPCDVFAP 237 (355)
T ss_dssp CCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECS-CHHHHHHHHHTTCE-----ECCGGGGGGCCCSEEEE
T ss_pred CCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEEeC-CccHHHHHHhcCCE-----EeChHHhhcCccceecH
Confidence 37999 9999999999999999999999 999885544 33324456666654 235667777 9999985
Q ss_pred cccCchHHHHHH-HHHhcCCCCcEEEEeC
Q 021218 185 LISDAAQADNYE-KIFSCMKPNSILGLSH 212 (316)
Q Consensus 185 avp~~~~~~vi~-ei~~~mk~gaiLid~a 212 (316)
|- ....++ +.++.|| .++|+..+
T Consensus 238 ~A----~~~~I~~~~~~~lk-~~iVie~A 261 (355)
T 1c1d_A 238 CA----MGGVITTEVARTLD-CSVVAGAA 261 (355)
T ss_dssp CS----CSCCBCHHHHHHCC-CSEECCSC
T ss_pred hH----HHhhcCHHHHhhCC-CCEEEECC
Confidence 42 222343 4455665 45666544
No 211
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.57 E-value=4.3e-05 Score=70.99 Aligned_cols=94 Identities=10% Similarity=0.065 Sum_probs=65.5
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCCc--eecCCCcCCHHhhh-ccCCE
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGF--TEENGTLGDIYETI-SGSDL 181 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~--~~~~~t~~~~~e~i-~~ADI 181 (316)
.+++| +++.|+|.|-+|.+++..|.+. |. +|.+..|+.++..+.+.+.+. .. ..+.+++- .++|+
T Consensus 116 ~~l~~-k~~lvlGaGg~~~aia~~L~~~------G~~~v~i~~R~~~~a~~la~~~~~~~~~----~~~~~~l~~~~~Di 184 (272)
T 3pwz_A 116 EPLRN-RRVLLLGAGGAVRGALLPFLQA------GPSELVIANRDMAKALALRNELDHSRLR----ISRYEALEGQSFDI 184 (272)
T ss_dssp CCCTT-SEEEEECCSHHHHHHHHHHHHT------CCSEEEEECSCHHHHHHHHHHHCCTTEE----EECSGGGTTCCCSE
T ss_pred CCccC-CEEEEECccHHHHHHHHHHHHc------CCCEEEEEeCCHHHHHHHHHHhccCCee----EeeHHHhcccCCCE
Confidence 35789 9999999999999999999998 86 888888876655555555432 11 11333332 78999
Q ss_pred EEEcccCchHHH--HHHHHHhcCCCCcEEEEeC
Q 021218 182 VLLLISDAAQAD--NYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 182 ViLavp~~~~~~--vi~ei~~~mk~gaiLid~a 212 (316)
||.++|.....+ .+. .+.++++.+++|+.
T Consensus 185 vInaTp~gm~~~~~~i~--~~~l~~~~~V~Dlv 215 (272)
T 3pwz_A 185 VVNATSASLTADLPPLP--ADVLGEAALAYELA 215 (272)
T ss_dssp EEECSSGGGGTCCCCCC--GGGGTTCSEEEESS
T ss_pred EEECCCCCCCCCCCCCC--HHHhCcCCEEEEee
Confidence 999999765322 111 23467788888764
No 212
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.56 E-value=2.8e-05 Score=72.43 Aligned_cols=91 Identities=16% Similarity=0.030 Sum_probs=64.5
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEccc
Q 021218 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (316)
Q Consensus 108 l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp 187 (316)
+.| +++.|||.|-+|.+++..|.+. |.+|.+.+|+.++..+.+ +.|+.. .+.+++ .++|+||.++|
T Consensus 116 ~~~-k~vlvlGaGGaaraia~~L~~~------G~~v~V~nRt~~ka~~la-~~~~~~-----~~~~~l-~~~DiVInaTp 181 (269)
T 3phh_A 116 KNY-QNALILGAGGSAKALACELKKQ------GLQVSVLNRSSRGLDFFQ-RLGCDC-----FMEPPK-SAFDLIINATS 181 (269)
T ss_dssp --C-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCTTHHHHH-HHTCEE-----ESSCCS-SCCSEEEECCT
T ss_pred cCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHH-HCCCeE-----ecHHHh-ccCCEEEEccc
Confidence 348 9999999999999999999998 888889999877766666 666542 133333 48999999999
Q ss_pred CchHHH-HHH-H-HHhcCCCCcEEEEeC
Q 021218 188 DAAQAD-NYE-K-IFSCMKPNSILGLSH 212 (316)
Q Consensus 188 ~~~~~~-vi~-e-i~~~mk~gaiLid~a 212 (316)
.....+ .+. + +.+.++++.+++|+.
T Consensus 182 ~Gm~~~~~l~~~~l~~~l~~~~~v~D~v 209 (269)
T 3phh_A 182 ASLHNELPLNKEVLKGYFKEGKLAYDLA 209 (269)
T ss_dssp TCCCCSCSSCHHHHHHHHHHCSEEEESC
T ss_pred CCCCCCCCCChHHHHhhCCCCCEEEEeC
Confidence 764321 121 2 222456788888864
No 213
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.55 E-value=0.00042 Score=64.83 Aligned_cols=72 Identities=18% Similarity=0.096 Sum_probs=45.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHH--HCCc-----eecCCCcCCHHhhhccCCEEEE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR--AAGF-----TEENGTLGDIYETISGSDLVLL 184 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~--~~G~-----~~~~~t~~~~~e~i~~ADIViL 184 (316)
|||+|||.|.||.++|..|... +.|.+|.+.+++.++....+. ..+. ...-....+.++ +++||+||+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~----~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvVii 75 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEK----QLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVII 75 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEE
Confidence 5899999999999999998774 225677777665432222221 1110 000001245655 899999999
Q ss_pred cccC
Q 021218 185 LISD 188 (316)
Q Consensus 185 avp~ 188 (316)
++|.
T Consensus 76 av~~ 79 (310)
T 1guz_A 76 TAGL 79 (310)
T ss_dssp CCSC
T ss_pred eCCC
Confidence 9964
No 214
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.54 E-value=2.4e-05 Score=72.00 Aligned_cols=75 Identities=13% Similarity=0.011 Sum_probs=52.6
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCc---eecCCCcCCHHhhhc-cCCEE
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF---TEENGTLGDIYETIS-GSDLV 182 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~---~~~~~t~~~~~e~i~-~ADIV 182 (316)
+++| +++.|||.|.||.+++..|.+. |.+|.+.+|+.++..+.+.+.+. .. ..+.+++.+ ++|+|
T Consensus 116 ~~~~-~~vlvlGaGg~g~a~a~~L~~~------G~~v~v~~R~~~~a~~l~~~~~~~~~~~----~~~~~~~~~~~~Div 184 (272)
T 1p77_A 116 LRPN-QHVLILGAGGATKGVLLPLLQA------QQNIVLANRTFSKTKELAERFQPYGNIQ----AVSMDSIPLQTYDLV 184 (272)
T ss_dssp CCTT-CEEEEECCSHHHHTTHHHHHHT------TCEEEEEESSHHHHHHHHHHHGGGSCEE----EEEGGGCCCSCCSEE
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHccccCCeE----EeeHHHhccCCCCEE
Confidence 5788 9999999999999999999998 88888888875554444444321 10 123344434 89999
Q ss_pred EEcccCchHH
Q 021218 183 LLLISDAAQA 192 (316)
Q Consensus 183 iLavp~~~~~ 192 (316)
|.++|.....
T Consensus 185 In~t~~~~~~ 194 (272)
T 1p77_A 185 INATSAGLSG 194 (272)
T ss_dssp EECCCC----
T ss_pred EECCCCCCCC
Confidence 9999987653
No 215
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.54 E-value=0.00017 Score=67.69 Aligned_cols=89 Identities=19% Similarity=0.213 Sum_probs=58.2
Q ss_pred cCCCC--EEEEEcccchHHHHHHHHHhhhhhh---cCCcEEE-EEecCCcccHHHHHHCCceecCCCcCCHHhhhc--cC
Q 021218 108 FNGIN--QIGVIGWGSQGPAQAQNLRDSLAEA---KSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GS 179 (316)
Q Consensus 108 l~G~k--kIGIIG~G~mG~AlA~~Lr~~~~~~---g~G~~Vi-vg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~--~A 179 (316)
++.|| +|||||+|.||..-+++++.. ... -.+.+++ +.+++.++..+.+.+.|+.. ...|.+|+++ +.
T Consensus 20 ~~~MkkirvgiIG~G~ig~~H~~a~~~~-~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~---~y~d~~ell~~~~i 95 (393)
T 4fb5_A 20 FQSMKPLGIGLIGTGYMGKCHALAWNAV-KTVFGDVERPRLVHLAEANAGLAEARAGEFGFEK---ATADWRALIADPEV 95 (393)
T ss_dssp ----CCCEEEEECCSHHHHHHHHHHTTH-HHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSE---EESCHHHHHHCTTC
T ss_pred ccCCCCccEEEEcCCHHHHHHHHHHHhh-hhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCe---ecCCHHHHhcCCCC
Confidence 44444 789999999999888777653 100 0134554 34444455566777788642 2568999885 57
Q ss_pred CEEEEcccCchHHHHHHHHHh
Q 021218 180 DLVLLLISDAAQADNYEKIFS 200 (316)
Q Consensus 180 DIViLavp~~~~~~vi~ei~~ 200 (316)
|+|++|+|+..+.++..+.++
T Consensus 96 DaV~IatP~~~H~~~a~~al~ 116 (393)
T 4fb5_A 96 DVVSVTTPNQFHAEMAIAALE 116 (393)
T ss_dssp CEEEECSCGGGHHHHHHHHHH
T ss_pred cEEEECCChHHHHHHHHHHHh
Confidence 999999999999987765544
No 216
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=97.53 E-value=0.00016 Score=67.80 Aligned_cols=74 Identities=16% Similarity=0.208 Sum_probs=60.4
Q ss_pred cCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcc
Q 021218 108 FNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (316)
Q Consensus 108 l~G~kkIGIIG~G~-mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLav 186 (316)
++| +++.|||.|. +|..+|+.|... |..|.+..++ ..++++.+++||+||.++
T Consensus 148 l~G-k~vvVvG~s~iVG~plA~lL~~~------gAtVtv~~~~-------------------t~~L~~~~~~ADIVI~Av 201 (276)
T 3ngx_A 148 YHE-NTVTIVNRSPVVGRPLSMMLLNR------NYTVSVCHSK-------------------TKDIGSMTRSSKIVVVAV 201 (276)
T ss_dssp CCS-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSCHHHHHHHSSEEEECS
T ss_pred cCC-CEEEEEcCChHHHHHHHHHHHHC------CCeEEEEeCC-------------------cccHHHhhccCCEEEECC
Confidence 899 9999999985 899999999998 9888777542 137889999999999999
Q ss_pred cCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 187 SDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 187 p~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
+-.. ++. .+++|+|++|+|++
T Consensus 202 g~p~---~I~--~~~vk~GavVIDvg 222 (276)
T 3ngx_A 202 GRPG---FLN--REMVTPGSVVIDVG 222 (276)
T ss_dssp SCTT---CBC--GGGCCTTCEEEECC
T ss_pred CCCc---ccc--HhhccCCcEEEEec
Confidence 8533 233 24579999999986
No 217
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.53 E-value=0.00012 Score=71.58 Aligned_cols=84 Identities=10% Similarity=0.129 Sum_probs=57.8
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEEEEEecCCc-ccHHHHHHCCceecC-CCcCCHHhhhc--cCCEEEEcc
Q 021218 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEEN-GTLGDIYETIS--GSDLVLLLI 186 (316)
Q Consensus 112 kkIGIIG~G~mG~-AlA~~Lr~~~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~~-~t~~~~~e~i~--~ADIViLav 186 (316)
.+|||||+|.||. .++..+++. .+.+++...+.+. +..+.+.+.|+...+ ....+.+++++ +.|+|++++
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~-----~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iat 158 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGC-----QHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIIL 158 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTC-----SSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECS
T ss_pred eEEEEECCcHHHHHHHHHHHhhC-----CCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcC
Confidence 6899999999997 899988764 1456543444433 333456666753100 01457888887 799999999
Q ss_pred cCchHHHHHHHHHh
Q 021218 187 SDAAQADNYEKIFS 200 (316)
Q Consensus 187 p~~~~~~vi~ei~~ 200 (316)
|+..+.+++.+.+.
T Consensus 159 p~~~h~~~~~~al~ 172 (433)
T 1h6d_A 159 PNSLHAEFAIRAFK 172 (433)
T ss_dssp CGGGHHHHHHHHHH
T ss_pred CchhHHHHHHHHHH
Confidence 99999887765543
No 218
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.53 E-value=0.00014 Score=69.89 Aligned_cols=82 Identities=12% Similarity=0.056 Sum_probs=60.3
Q ss_pred CEEEEEcccc---hHHHHHHHHHhhhhhhcCC-cEEEE--EecCCcccHHHHHHCCceecCCCcCCHHhhhcc-------
Q 021218 112 NQIGVIGWGS---QGPAQAQNLRDSLAEAKSD-IVVKV--GLRKGSRSFAEARAAGFTEENGTLGDIYETISG------- 178 (316)
Q Consensus 112 kkIGIIG~G~---mG~AlA~~Lr~~~~~~g~G-~~Viv--g~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~------- 178 (316)
.+|||||+|. ||...+..++.. + .+++. .++..++..+.+++.|+.. ...+.+.+|++++
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~------~~~~lva~v~d~~~~~a~~~a~~~g~~~-~~~~~~~~~ll~~~~~~~~~ 85 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRD------NTFVLVAGAFDIDPIRGSAFGEQLGVDS-ERCYADYLSMFEQEARRADG 85 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGG------GSEEEEEEECCSSHHHHHHHHHHTTCCG-GGBCSSHHHHHHHHTTCTTC
T ss_pred ceEEEEcCCccchhHHHHHHHHhhC------CCeEEEEEEeCCCHHHHHHHHHHhCCCc-ceeeCCHHHHHhcccccCCC
Confidence 5899999999 999999988775 4 56553 2333344455677788731 0125789999865
Q ss_pred CCEEEEcccCchHHHHHHHHHh
Q 021218 179 SDLVLLLISDAAQADNYEKIFS 200 (316)
Q Consensus 179 ADIViLavp~~~~~~vi~ei~~ 200 (316)
.|+|++++|+..+.++..+.+.
T Consensus 86 vD~V~i~tp~~~H~~~~~~al~ 107 (398)
T 3dty_A 86 IQAVSIATPNGTHYSITKAALE 107 (398)
T ss_dssp CSEEEEESCGGGHHHHHHHHHH
T ss_pred CCEEEECCCcHHHHHHHHHHHH
Confidence 9999999999999887776544
No 219
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=97.53 E-value=0.00019 Score=67.57 Aligned_cols=76 Identities=14% Similarity=0.131 Sum_probs=61.1
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEE
Q 021218 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~-mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViL 184 (316)
.+|+| +++.|||.|. +|..+|+.|... |..|.+..++ ..++++.+++||+||.
T Consensus 157 i~l~G-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~hs~-------------------t~~L~~~~~~ADIVI~ 210 (285)
T 3l07_A 157 IKTEG-AYAVVVGASNVVGKPVSQLLLNA------KATVTTCHRF-------------------TTDLKSHTTKADILIV 210 (285)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSSHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCchhHHHHHHHHHHC------CCeEEEEeCC-------------------chhHHHhcccCCEEEE
Confidence 57899 9999999987 699999999998 8888776542 1267889999999999
Q ss_pred cccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 185 avp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
+++-.. ++. .+++|+|++|+|++
T Consensus 211 Avg~p~---~I~--~~~vk~GavVIDvg 233 (285)
T 3l07_A 211 AVGKPN---FIT--ADMVKEGAVVIDVG 233 (285)
T ss_dssp CCCCTT---CBC--GGGSCTTCEEEECC
T ss_pred CCCCCC---CCC--HHHcCCCcEEEEec
Confidence 998432 232 25679999999986
No 220
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=97.52 E-value=0.00019 Score=67.56 Aligned_cols=77 Identities=18% Similarity=0.110 Sum_probs=61.7
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEE
Q 021218 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~-mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViL 184 (316)
.+++| +++.|||.|. .|..+|+.|... |..|.+..++ ..++.+.+++||+||.
T Consensus 156 i~l~G-k~vvVvGrs~iVG~p~A~lL~~~------gAtVtv~h~~-------------------t~~L~~~~~~ADIVI~ 209 (285)
T 3p2o_A 156 IDLEG-KDAVIIGASNIVGRPMATMLLNA------GATVSVCHIK-------------------TKDLSLYTRQADLIIV 209 (285)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSCHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCchHHHHHHHHHHHC------CCeEEEEeCC-------------------chhHHHHhhcCCEEEE
Confidence 57899 9999999987 699999999998 8888776542 1267889999999999
Q ss_pred cccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 185 avp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
+++-.. ++. .+++|+|++|+|++-
T Consensus 210 Avg~p~---~I~--~~~vk~GavVIDVgi 233 (285)
T 3p2o_A 210 AAGCVN---LLR--SDMVKEGVIVVDVGI 233 (285)
T ss_dssp CSSCTT---CBC--GGGSCTTEEEEECCC
T ss_pred CCCCCC---cCC--HHHcCCCeEEEEecc
Confidence 998432 232 256799999999863
No 221
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.52 E-value=0.00015 Score=68.02 Aligned_cols=90 Identities=19% Similarity=0.174 Sum_probs=60.3
Q ss_pred EEEEEcccchHHHHHHHHHhhhhh---hcCCcEEEEEecCC-cccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEcc
Q 021218 113 QIGVIGWGSQGPAQAQNLRDSLAE---AKSDIVVKVGLRKG-SRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLI 186 (316)
Q Consensus 113 kIGIIG~G~mG~AlA~~Lr~~~~~---~g~G~~Vivg~r~~-~~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLav 186 (316)
+|||||+|.||...+.+++.. .+ ...+.++....+.+ ++..+.+.+.|+.. ...+.+++++ +.|+|++++
T Consensus 8 rvgiIG~G~ig~~h~~~~~~~-~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~---~~~d~~~ll~~~~iDaV~I~t 83 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRSA-PRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWST---TETDWRTLLERDDVQLVDVCT 83 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHHH-HHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSE---EESCHHHHTTCTTCSEEEECS
T ss_pred cEEEEcCCHHHHHHHHHHHhC-ccccccccCceEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEEeC
Confidence 689999999999988888764 11 00112444333443 34445667777642 2568999985 479999999
Q ss_pred cCchHHHHHHHHHhcCCCCcEEE
Q 021218 187 SDAAQADNYEKIFSCMKPNSILG 209 (316)
Q Consensus 187 p~~~~~~vi~ei~~~mk~gaiLi 209 (316)
|+..+.++..+.+. .|+-|.
T Consensus 84 P~~~H~~~~~~al~---aGkhVl 103 (390)
T 4h3v_A 84 PGDSHAEIAIAALE---AGKHVL 103 (390)
T ss_dssp CGGGHHHHHHHHHH---TTCEEE
T ss_pred ChHHHHHHHHHHHH---cCCCce
Confidence 99999987765544 355443
No 222
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=97.49 E-value=2.3e-05 Score=74.80 Aligned_cols=96 Identities=13% Similarity=0.078 Sum_probs=65.0
Q ss_pred ccCCCCEEEEEcccch-HHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCC----c--CCHHhhhccC
Q 021218 107 AFNGINQIGVIGWGSQ-GPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT----L--GDIYETISGS 179 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~m-G~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t----~--~~~~e~i~~A 179 (316)
+++| +++.|||.|.| |..+|+.|... |..|.+.+|+..+.++.+.+.+......+ + .++.+.+++|
T Consensus 174 ~l~g-k~vvVIG~G~iVG~~~A~~L~~~------gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~A 246 (320)
T 1edz_A 174 RLYG-KKCIVINRSEIVGRPLAALLAND------GATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDS 246 (320)
T ss_dssp TTTT-CEEEEECCCTTTHHHHHHHHHTT------SCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHC
T ss_pred CCCC-CEEEEECCCcchHHHHHHHHHHC------CCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccC
Confidence 7899 99999999976 99999999988 88888887653322222222221000000 1 3678899999
Q ss_pred CEEEEcccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 180 DIViLavp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
|+||.+++-... ++. .+++|+|++|+|++-
T Consensus 247 DIVIsAtg~p~~--vI~--~e~vk~GavVIDVgi 276 (320)
T 1edz_A 247 DVVITGVPSENY--KFP--TEYIKEGAVCINFAC 276 (320)
T ss_dssp SEEEECCCCTTC--CBC--TTTSCTTEEEEECSS
T ss_pred CEEEECCCCCcc--eeC--HHHcCCCeEEEEcCC
Confidence 999999985321 122 234689999999864
No 223
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.49 E-value=0.00031 Score=66.63 Aligned_cols=93 Identities=15% Similarity=0.143 Sum_probs=60.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCccc-HHHHHHCCceec-------------C-CCcCCHHhhh
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS-FAEARAAGFTEE-------------N-GTLGDIYETI 176 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s-~~~A~~~G~~~~-------------~-~t~~~~~e~i 176 (316)
.+|||||+|.||..+++.+... .+++++...+.+.+. ...++..|+... + ....+.++++
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~-----~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~ 77 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQ-----DDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLL 77 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHH
T ss_pred cEEEEEeEhHHHHHHHHHHhcC-----CCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhc
Confidence 5899999999999999999864 135654444333333 344555553210 0 0124778888
Q ss_pred ccCCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 177 ~~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
.++|+|+.|+|.....+.....+ +.|+.|++.+
T Consensus 78 ~~vDvV~~aTp~~~h~~~a~~~l---~aGk~Vi~sa 110 (334)
T 2czc_A 78 EKVDIIVDATPGGIGAKNKPLYE---KAGVKAIFQG 110 (334)
T ss_dssp TTCSEEEECCSTTHHHHHHHHHH---HHTCEEEECT
T ss_pred cCCCEEEECCCccccHHHHHHHH---HcCCceEeec
Confidence 89999999999988777665433 3466566554
No 224
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=97.49 E-value=0.00015 Score=68.66 Aligned_cols=77 Identities=14% Similarity=0.120 Sum_probs=61.1
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHH--hhhccCCEE
Q 021218 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY--ETISGSDLV 182 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~-mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~--e~i~~ADIV 182 (316)
.+++| +++.|||.|. +|..+|+.|... |..|.+..++.. +++ +.+++||+|
T Consensus 161 i~l~G-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~~~~T~-------------------~l~l~~~~~~ADIV 214 (300)
T 4a26_A 161 IEMAG-KRAVVLGRSNIVGAPVAALLMKE------NATVTIVHSGTS-------------------TEDMIDYLRTADIV 214 (300)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTTSC-------------------HHHHHHHHHTCSEE
T ss_pred CCCCC-CEEEEECCCchHHHHHHHHHHHC------CCeEEEEeCCCC-------------------CchhhhhhccCCEE
Confidence 57899 9999999887 799999999998 988887765321 345 789999999
Q ss_pred EEcccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 183 LLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 183 iLavp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
|.+++-.. ++. .+++|+|++|+|++-
T Consensus 215 I~Avg~p~---~I~--~~~vk~GavVIDvgi 240 (300)
T 4a26_A 215 IAAMGQPG---YVK--GEWIKEGAAVVDVGT 240 (300)
T ss_dssp EECSCCTT---CBC--GGGSCTTCEEEECCC
T ss_pred EECCCCCC---CCc--HHhcCCCcEEEEEec
Confidence 99999532 232 245799999999863
No 225
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.48 E-value=0.00026 Score=66.65 Aligned_cols=71 Identities=20% Similarity=0.182 Sum_probs=45.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCcccHHHHHHCCceecCCC-------cCCHHhhhccCCEE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGFTEENGT-------LGDIYETISGSDLV 182 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~~s~~~A~~~G~~~~~~t-------~~~~~e~i~~ADIV 182 (316)
+||+|||.|+||.++|..+... +. ++++.+.+ +. ...+...++.+.... ..+..+.+++||+|
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~------~~~~ev~l~Di~-~~-~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvV 78 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ------GIADEIVLIDAN-ES-KAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLV 78 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSS-HH-HHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCCEEEEEeCC-cc-hHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEE
Confidence 7999999999999999999887 64 55555543 32 222222222110000 01345779999999
Q ss_pred EEcccCch
Q 021218 183 LLLISDAA 190 (316)
Q Consensus 183 iLavp~~~ 190 (316)
|++.+...
T Consensus 79 iia~~~~~ 86 (316)
T 1ldn_A 79 VICAGANQ 86 (316)
T ss_dssp EECCSCCC
T ss_pred EEcCCCCC
Confidence 99976543
No 226
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.47 E-value=0.00029 Score=66.47 Aligned_cols=85 Identities=14% Similarity=0.149 Sum_probs=58.4
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH---CCceecCCCcCCHHhhhcc--CCEEEEc
Q 021218 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA---AGFTEENGTLGDIYETISG--SDLVLLL 185 (316)
Q Consensus 112 kkIGIIG~G~mG~-AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~---~G~~~~~~t~~~~~e~i~~--ADIViLa 185 (316)
.+|||||+|.||. ..+..+++. .+.+++...+++ ...+.+.+ .+... ..+.++++++ .|+|+++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~-~~~~~a~~~~~~~~~~----~~~~~~ll~~~~~D~V~i~ 72 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIR-----ETLEVKTIFDLH-VNEKAAAPFKEKGVNF----TADLNELLTDPEIELITIC 72 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTC-----TTEEEEEEECTT-CCHHHHHHHHTTTCEE----ESCTHHHHSCTTCCEEEEC
T ss_pred eEEEEEccCHHHHHHHHHHHhhC-----CCeEEEEEECCC-HHHHHHHhhCCCCCeE----ECCHHHHhcCCCCCEEEEe
Confidence 5899999999998 566666553 156665444443 44455555 45442 5688999876 8999999
Q ss_pred ccCchHHHHHHHHHhcCCCCcEEE
Q 021218 186 ISDAAQADNYEKIFSCMKPNSILG 209 (316)
Q Consensus 186 vp~~~~~~vi~ei~~~mk~gaiLi 209 (316)
+|+..+.++..+.+. .|+.|.
T Consensus 73 tp~~~h~~~~~~al~---aGk~Vl 93 (349)
T 3i23_A 73 TPAHTHYDLAKQAIL---AGKSVI 93 (349)
T ss_dssp SCGGGHHHHHHHHHH---TTCEEE
T ss_pred CCcHHHHHHHHHHHH---cCCEEE
Confidence 999998887765543 455443
No 227
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=97.44 E-value=0.00025 Score=66.74 Aligned_cols=77 Identities=21% Similarity=0.150 Sum_probs=61.4
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEE
Q 021218 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~-mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViL 184 (316)
.+++| +++.|||.|. .|..+|+.|... |..|.+..++ ..++++.+++||+||.
T Consensus 157 i~l~G-k~vvVvGrs~iVG~plA~lL~~~------gAtVtv~hs~-------------------T~~L~~~~~~ADIVI~ 210 (286)
T 4a5o_A 157 ADLYG-MDAVVVGASNIVGRPMALELLLG------GCTVTVTHRF-------------------TRDLADHVSRADLVVV 210 (286)
T ss_dssp CCCTT-CEEEEECTTSTTHHHHHHHHHHT------TCEEEEECTT-------------------CSCHHHHHHTCSEEEE
T ss_pred CCCCC-CEEEEECCCchhHHHHHHHHHHC------CCeEEEEeCC-------------------CcCHHHHhccCCEEEE
Confidence 57899 9999999876 799999999998 8888776532 1267889999999999
Q ss_pred cccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 185 avp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
+++-.. ++. .+++|||++|+|++-
T Consensus 211 Avg~p~---~I~--~~~vk~GavVIDvgi 234 (286)
T 4a5o_A 211 AAGKPG---LVK--GEWIKEGAIVIDVGI 234 (286)
T ss_dssp CCCCTT---CBC--GGGSCTTCEEEECCS
T ss_pred CCCCCC---CCC--HHHcCCCeEEEEecc
Confidence 998432 232 255799999999863
No 228
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.43 E-value=0.00017 Score=68.52 Aligned_cols=81 Identities=15% Similarity=0.101 Sum_probs=55.1
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCcccH-HHHHHCCceecCCCcCCHHhhhcc--CCEEEEccc
Q 021218 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSF-AEARAAGFTEENGTLGDIYETISG--SDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~A-lA~~Lr~~~~~~g~G~~Vivg~r~~~~s~-~~A~~~G~~~~~~t~~~~~e~i~~--ADIViLavp 187 (316)
.+|||||+|.||.. +++.+++. .+.+++...+++.... +.+.+.+... .+.+.++++++ .|+|++++|
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~~~~~---~~~~~~~ll~~~~vD~V~i~tp 77 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQM-----QDIRIVAACDSDLERARRVHRFISDIP---VLDNVPAMLNQVPLDAVVMAGP 77 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTC-----TTEEEEEEECSSHHHHGGGGGTSCSCC---EESSHHHHHHHSCCSEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-----CCcEEEEEEcCCHHHHHHHHHhcCCCc---ccCCHHHHhcCCCCCEEEEcCC
Confidence 58999999999985 88888764 1456654444443322 2233333221 25689999875 499999999
Q ss_pred CchHHHHHHHHHh
Q 021218 188 DAAQADNYEKIFS 200 (316)
Q Consensus 188 ~~~~~~vi~ei~~ 200 (316)
+..+.+++.+.+.
T Consensus 78 ~~~H~~~~~~al~ 90 (359)
T 3m2t_A 78 PQLHFEMGLLAMS 90 (359)
T ss_dssp HHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 9998887765544
No 229
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.43 E-value=0.00041 Score=65.48 Aligned_cols=94 Identities=19% Similarity=0.170 Sum_probs=62.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCccc--HHHHHHCCceecCCCcCCHHhhh-----ccCCEEEE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS--FAEARAAGFTEENGTLGDIYETI-----SGSDLVLL 184 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s--~~~A~~~G~~~~~~t~~~~~e~i-----~~ADIViL 184 (316)
.+|||||+|.+|..+++.+.+.+ .+.+++...+.+..+ .+.+++.|.... ..+.++++ ++.|+|++
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~----~~~elvav~d~~~~~~~~~~a~~~g~~~~---~~~~e~ll~~~~~~~iDvV~~ 77 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNA----KYLEMGAMVGIDAASDGLARAQRMGVTTT---YAGVEGLIKLPEFADIDFVFD 77 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC----SSEEEEEEECSCTTCHHHHHHHHTTCCEE---SSHHHHHHHSGGGGGEEEEEE
T ss_pred CEEEEEcCcHHHHHHHHHHHhhC----cCeEEEEEEeCChhhhHHHHHHHcCCCcc---cCCHHHHHhccCCCCCcEEEE
Confidence 58999999999999999985520 155655444444333 566778886421 23556665 45899999
Q ss_pred cccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 185 avp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
++|...+.++..+.... ++|+.|++...
T Consensus 78 atp~~~h~~~a~~al~a-~~Gk~Vi~ekp 105 (312)
T 1nvm_B 78 ATSASAHVQNEALLRQA-KPGIRLIDLTP 105 (312)
T ss_dssp CSCHHHHHHHHHHHHHH-CTTCEEEECST
T ss_pred CCChHHHHHHHHHHHHh-CCCCEEEEcCc
Confidence 99987777766654432 34777777443
No 230
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.42 E-value=0.0011 Score=62.61 Aligned_cols=65 Identities=15% Similarity=0.148 Sum_probs=43.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHH-HHH--HC-------CceecCCCcCCHHhhhccCC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFA-EAR--AA-------GFTEENGTLGDIYETISGSD 180 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~-~A~--~~-------G~~~~~~t~~~~~e~i~~AD 180 (316)
+||+|||.|.||.++|..+... |+ +|.+.+.+ ++..+ .+. +. .... ....+. +.+++||
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~------g~~~v~L~Di~-~~~l~~~~~~l~~~~~~~~~~~~i--~~t~d~-~al~~aD 74 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK------NLGDVVLFDIV-KNMPHGKALDTSHTNVMAYSNCKV--SGSNTY-DDLAGAD 74 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSS-SSHHHHHHHHHHTHHHHHTCCCCE--EEECCG-GGGTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCC-HHHHHHHHHHHHhhhhhcCCCcEE--EECCCH-HHhCCCC
Confidence 7999999999999999999988 87 75555444 33222 111 11 1110 012466 7899999
Q ss_pred EEEEcc
Q 021218 181 LVLLLI 186 (316)
Q Consensus 181 IViLav 186 (316)
+||+++
T Consensus 75 ~Vi~a~ 80 (322)
T 1t2d_A 75 VVIVTA 80 (322)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 999998
No 231
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=97.41 E-value=0.00036 Score=66.10 Aligned_cols=77 Identities=16% Similarity=0.152 Sum_probs=61.8
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEE
Q 021218 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~-mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViL 184 (316)
.+++| +++.|||.|+ +|..+|+.|... |..|.+..++ ..++.+.+++||+||.
T Consensus 161 i~l~g-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~hs~-------------------t~~L~~~~~~ADIVI~ 214 (301)
T 1a4i_A 161 VPIAG-RHAVVVGRSKIVGAPMHDLLLWN------NATVTTCHSK-------------------TAHLDEEVNKGDILVV 214 (301)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSSHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCchHHHHHHHHHHhC------CCeEEEEECC-------------------cccHHHHhccCCEEEE
Confidence 47899 9999999996 699999999988 8888776432 2378899999999999
Q ss_pred cccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 185 avp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
+++-.. ++. .+++|||++|+|++-
T Consensus 215 Avg~p~---~I~--~~~vk~GavVIDVgi 238 (301)
T 1a4i_A 215 ATGQPE---MVK--GEWIKPGAIVIDCGI 238 (301)
T ss_dssp CCCCTT---CBC--GGGSCTTCEEEECCC
T ss_pred CCCCcc---cCC--HHHcCCCcEEEEccC
Confidence 998743 222 244789999999874
No 232
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=97.40 E-value=0.00027 Score=66.60 Aligned_cols=77 Identities=16% Similarity=0.081 Sum_probs=61.5
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEE
Q 021218 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~-mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViL 184 (316)
.+++| +++.|||.|. .|..+|+.|... |..|.+..++ ..++.+.+++||+||.
T Consensus 155 i~l~g-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~hs~-------------------t~~L~~~~~~ADIVI~ 208 (288)
T 1b0a_A 155 IDTFG-LNAVVIGASNIVGRPMSMELLLA------GCTTTVTHRF-------------------TKNLRHHVENADLLIV 208 (288)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHTT------TCEEEEECSS-------------------CSCHHHHHHHCSEEEE
T ss_pred CCCCC-CEEEEECCChHHHHHHHHHHHHC------CCeEEEEeCC-------------------chhHHHHhccCCEEEE
Confidence 47899 9999999997 599999999988 8888776432 2378889999999999
Q ss_pred cccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 185 avp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
+++-.. ++. .+++|+|++|+|++-
T Consensus 209 Avg~p~---lI~--~~~vk~GavVIDVgi 232 (288)
T 1b0a_A 209 AVGKPG---FIP--GDWIKEGAIVIDVGI 232 (288)
T ss_dssp CSCCTT---CBC--TTTSCTTCEEEECCC
T ss_pred CCCCcC---cCC--HHHcCCCcEEEEccC
Confidence 999544 232 234699999999873
No 233
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.38 E-value=0.00025 Score=68.81 Aligned_cols=88 Identities=16% Similarity=0.192 Sum_probs=61.3
Q ss_pred CEEEEEcccc---hHHHHHHHHHhhhhhhcCC-cEEEE-E-ecCCcccHHHHHHCCceecCCCcCCHHhhhcc-------
Q 021218 112 NQIGVIGWGS---QGPAQAQNLRDSLAEAKSD-IVVKV-G-LRKGSRSFAEARAAGFTEENGTLGDIYETISG------- 178 (316)
Q Consensus 112 kkIGIIG~G~---mG~AlA~~Lr~~~~~~g~G-~~Viv-g-~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~------- 178 (316)
.+|||||+|. ||...+..++.. + ++++. . ++..++..+.+++.|+.. ...+.+.++++++
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~------~~~~lva~v~d~~~~~a~~~a~~~g~~~-~~~~~~~~~ll~~~~~~~~~ 110 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLD------DHYELVAGALSSTPEKAEASGRELGLDP-SRVYSDFKEMAIREAKLKNG 110 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHT------SCEEEEEEECCSSHHHHHHHHHHHTCCG-GGBCSCHHHHHHHHHHCTTC
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhC------CCcEEEEEEeCCCHHHHHHHHHHcCCCc-ccccCCHHHHHhcccccCCC
Confidence 4899999999 999999888776 4 56553 3 333344445667777731 0125789999876
Q ss_pred CCEEEEcccCchHHHHHHHHHhcCCCCcEEE
Q 021218 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (316)
Q Consensus 179 ADIViLavp~~~~~~vi~ei~~~mk~gaiLi 209 (316)
.|+|++++|+..+.+++.+.+ +.|+-|.
T Consensus 111 vD~V~I~tp~~~H~~~~~~al---~aGkhVl 138 (417)
T 3v5n_A 111 IEAVAIVTPNHVHYAAAKEFL---KRGIHVI 138 (417)
T ss_dssp CSEEEECSCTTSHHHHHHHHH---TTTCEEE
T ss_pred CcEEEECCCcHHHHHHHHHHH---hCCCeEE
Confidence 899999999999888776554 3465443
No 234
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.37 E-value=0.00065 Score=66.48 Aligned_cols=94 Identities=14% Similarity=0.181 Sum_probs=65.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCH---Hhh-hccCCEEEEccc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI---YET-ISGSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~---~e~-i~~ADIViLavp 187 (316)
++|.|||+|.+|..+++.|++. |++|++.++ ++...+.+++.|+..-.+...+. .++ +.+||+||++++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~------g~~vvvId~-d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS------GVKMVVLDH-DPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEEC-CHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCCEEEEEC-CHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence 6799999999999999999999 988766554 45566777777863221112232 233 688999999999
Q ss_pred CchHHHHHHHHHhcCCCC-cEEEEeC
Q 021218 188 DAAQADNYEKIFSCMKPN-SILGLSH 212 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~g-aiLid~a 212 (316)
+......+-.....+.|+ .+|.-+.
T Consensus 78 ~~~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 78 DPQTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred ChHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 877666555555555565 4554443
No 235
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.37 E-value=0.00015 Score=67.59 Aligned_cols=98 Identities=19% Similarity=0.163 Sum_probs=67.2
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCC-----ceecCCCcCCHHhhhccC
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAG-----FTEENGTLGDIYETISGS 179 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G-----~~~~~~t~~~~~e~i~~A 179 (316)
.+++| +++.|+|.|-+|.+++..|.+. |. +|.+.+|+.++..+.+.+.+ .........++.+.++++
T Consensus 123 ~~l~~-k~vlVlGaGG~g~aia~~L~~~------G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~ 195 (283)
T 3jyo_A 123 PNAKL-DSVVQVGAGGVGNAVAYALVTH------GVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAA 195 (283)
T ss_dssp TTCCC-SEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHS
T ss_pred cCcCC-CEEEEECCcHHHHHHHHHHHHC------CCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcC
Confidence 46789 9999999999999999999998 87 68888887555444443322 110000123677888999
Q ss_pred CEEEEcccCchHHH---HHHHHHhcCCCCcEEEEeC
Q 021218 180 DLVLLLISDAAQAD---NYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 180 DIViLavp~~~~~~---vi~ei~~~mk~gaiLid~a 212 (316)
|+||-++|...... .+. ...++++.++.|+.
T Consensus 196 DiVInaTp~Gm~~~~~~pi~--~~~l~~~~~v~Dlv 229 (283)
T 3jyo_A 196 DGVVNATPMGMPAHPGTAFD--VSCLTKDHWVGDVV 229 (283)
T ss_dssp SEEEECSSTTSTTSCSCSSC--GGGCCTTCEEEECC
T ss_pred CEEEECCCCCCCCCCCCCCC--HHHhCCCCEEEEec
Confidence 99999999654321 111 34567788888764
No 236
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.36 E-value=0.00028 Score=67.79 Aligned_cols=86 Identities=19% Similarity=0.171 Sum_probs=59.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhh---hhhcCCcEEEEEecCC-cccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSL---AEAKSDIVVKVGLRKG-SRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLL 185 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~---~~~g~G~~Vivg~r~~-~~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLa 185 (316)
.+|||||+|.||...+.++++.- .+...+.+++...+.+ ++..+.+++.|+.. .+.+.+++++ +.|+|+++
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~---~y~d~~~ll~~~~vD~V~I~ 103 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEK---AYGDWRELVNDPQVDVVDIT 103 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSE---EESSHHHHHHCTTCCEEEEC
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCe---EECCHHHHhcCCCCCEEEEC
Confidence 48999999999999999888740 0000123554334443 34445667777642 2568999885 57999999
Q ss_pred ccCchHHHHHHHHHh
Q 021218 186 ISDAAQADNYEKIFS 200 (316)
Q Consensus 186 vp~~~~~~vi~ei~~ 200 (316)
+|+..+.++..+.+.
T Consensus 104 tp~~~H~~~~~~al~ 118 (412)
T 4gqa_A 104 SPNHLHYTMAMAAIA 118 (412)
T ss_dssp SCGGGHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHH
Confidence 999999887765544
No 237
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.35 E-value=0.00015 Score=68.31 Aligned_cols=86 Identities=12% Similarity=0.133 Sum_probs=55.2
Q ss_pred CEEEEEcccchHHHH-HHHH-HhhhhhhcCCcEEEEEecCCcccHHHHHH-CCceecCCCcCCHHhhhcc--CCEEEEcc
Q 021218 112 NQIGVIGWGSQGPAQ-AQNL-RDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTEENGTLGDIYETISG--SDLVLLLI 186 (316)
Q Consensus 112 kkIGIIG~G~mG~Al-A~~L-r~~~~~~g~G~~Vivg~r~~~~s~~~A~~-~G~~~~~~t~~~~~e~i~~--ADIViLav 186 (316)
.+|||||+|.||..+ +..+ ... .+.+++...+++....+.+.+ .+... ..+.++++++ .|+|++++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~D~V~i~t 73 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRK-----DSWHVAHIFRRHAKPEEQAPIYSHIHF----TSDLDEVLNDPDVKLVVVCT 73 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCT-----TTEEEEEEECSSCCGGGGSGGGTTCEE----ESCTHHHHTCTTEEEEEECS
T ss_pred eEEEEEecCHHHHHHHHHHHHhcC-----CCeEEEEEEcCCHhHHHHHHhcCCCce----ECCHHHHhcCCCCCEEEEcC
Confidence 689999999999864 4423 322 156665344433322222223 24432 5688999876 89999999
Q ss_pred cCchHHHHHHHHHhcCCCCcEEE
Q 021218 187 SDAAQADNYEKIFSCMKPNSILG 209 (316)
Q Consensus 187 p~~~~~~vi~ei~~~mk~gaiLi 209 (316)
|+..+.++..+.+. .|+.|+
T Consensus 74 p~~~h~~~~~~al~---aGk~Vl 93 (345)
T 3f4l_A 74 HADSHFEYAKRALE---AGKNVL 93 (345)
T ss_dssp CGGGHHHHHHHHHH---TTCEEE
T ss_pred ChHHHHHHHHHHHH---cCCcEE
Confidence 99999887765443 466554
No 238
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.34 E-value=0.00074 Score=65.94 Aligned_cols=88 Identities=14% Similarity=0.166 Sum_probs=58.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHH-HH---HCCceecCCCcC----CHHhhhc--cCCE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE-AR---AAGFTEENGTLG----DIYETIS--GSDL 181 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~-A~---~~G~~~~~~t~~----~~~e~i~--~ADI 181 (316)
.+|||||+|.||...+..+++. .+.+++...+.++...+. ++ +.|+.. ..... +.+++++ +.|+
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~-----~~~~lvav~d~~~~~~~~~a~~~~~~g~~~-~~~~~~~~~~~~~ll~~~~vD~ 94 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARR-----DDVEIVAFADPDPYMVGRAQEILKKNGKKP-AKVFGNGNDDYKNMLKDKNIDA 94 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEECSCHHHHHHHHHHHHHTTCCC-CEEECSSTTTHHHHTTCTTCCE
T ss_pred ceEEEEecCHHHHHHHHHHHhC-----CCcEEEEEEeCCHHHHHHHHHHHHhcCCCC-CceeccCCCCHHHHhcCCCCCE
Confidence 5899999999999999988764 156665444544433332 22 345310 00134 8899987 5899
Q ss_pred EEEcccCchHHHHHHHHHhcCCCCcEE
Q 021218 182 VLLLISDAAQADNYEKIFSCMKPNSIL 208 (316)
Q Consensus 182 ViLavp~~~~~~vi~ei~~~mk~gaiL 208 (316)
|++++|+..+.++..+.++ .|+.|
T Consensus 95 V~i~tp~~~h~~~~~~al~---aGkhV 118 (444)
T 2ixa_A 95 VFVSSPWEWHHEHGVAAMK---AGKIV 118 (444)
T ss_dssp EEECCCGGGHHHHHHHHHH---TTCEE
T ss_pred EEEcCCcHHHHHHHHHHHH---CCCeE
Confidence 9999999998887665443 45543
No 239
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.30 E-value=0.00052 Score=64.98 Aligned_cols=84 Identities=11% Similarity=0.181 Sum_probs=57.7
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC-CceecCCCcCCHHhhhc--cCCEEEEccc
Q 021218 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETIS--GSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~A-lA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~-G~~~~~~t~~~~~e~i~--~ADIViLavp 187 (316)
.+|||||+|.||.. .+..+++. .+.+++...+.+.. +.+.+. +... +.+.+++++ +.|+|++++|
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~--~~~~~~~~~~~----~~~~~~ll~~~~vD~V~i~tp 74 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVL-----DEYQISKIMTSRTE--EVKRDFPDAEV----VHELEEITNDPAIELVIVTTP 74 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTC-----TTEEEEEEECSCHH--HHHHHCTTSEE----ESSTHHHHTCTTCCEEEECSC
T ss_pred ceEEEEccCHHHHHHHHHHHhhC-----CCeEEEEEEcCCHH--HHHhhCCCCce----ECCHHHHhcCCCCCEEEEcCC
Confidence 58999999999997 67777653 14566544444432 234455 3332 568899987 7899999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEE
Q 021218 188 DAAQADNYEKIFSCMKPNSILG 209 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~gaiLi 209 (316)
+..+.++..+.+. .|+-|.
T Consensus 75 ~~~H~~~~~~al~---aGkhVl 93 (358)
T 3gdo_A 75 SGLHYEHTMACIQ---AGKHVV 93 (358)
T ss_dssp TTTHHHHHHHHHH---TTCEEE
T ss_pred cHHHHHHHHHHHH---cCCeEE
Confidence 9999887765543 355443
No 240
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.29 E-value=0.00045 Score=65.00 Aligned_cols=82 Identities=15% Similarity=0.142 Sum_probs=58.4
Q ss_pred CEEEEEccc-chHHHHHHHHHhhhhhhcCCcEEEEEecCCc-ccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEccc
Q 021218 112 NQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G-~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLavp 187 (316)
.+|||||+| .+|...+..+++. +.+.+++...+.++ +..+.+++.|... .+.+.+++++ +.|+|++++|
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~----~~~~~lvav~d~~~~~~~~~a~~~~~~~---~~~~~~~ll~~~~vD~V~i~tp 91 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNL----SHLFEITAVTSRTRSHAEEFAKMVGNPA---VFDSYEELLESGLVDAVDLTLP 91 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTT----TTTEEEEEEECSSHHHHHHHHHHHSSCE---EESCHHHHHHSSCCSEEEECCC
T ss_pred eeEEEEecCHHHHHHHHHHHHhC----CCceEEEEEEcCCHHHHHHHHHHhCCCc---ccCCHHHHhcCCCCCEEEEeCC
Confidence 689999999 8999999998764 11456544444443 3344566667621 2568999886 5899999999
Q ss_pred CchHHHHHHHHHh
Q 021218 188 DAAQADNYEKIFS 200 (316)
Q Consensus 188 ~~~~~~vi~ei~~ 200 (316)
+..+.++..+.+.
T Consensus 92 ~~~H~~~~~~al~ 104 (340)
T 1zh8_A 92 VELNLPFIEKALR 104 (340)
T ss_dssp GGGHHHHHHHHHH
T ss_pred chHHHHHHHHHHH
Confidence 9998887765543
No 241
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=97.29 E-value=0.0018 Score=60.84 Aligned_cols=90 Identities=14% Similarity=0.111 Sum_probs=56.2
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCc---ccHHHHHHC--CceecCCCcCCHHhhhccCCEEE
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGS---RSFAEARAA--GFTEENGTLGDIYETISGSDLVL 183 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~---~s~~~A~~~--G~~~~~~t~~~~~e~i~~ADIVi 183 (316)
++||+|||.|.||..+|..+... |+ ++.+.+.+.+ ...+..... .+.. ..+. +.+++||+||
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~------g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~----t~d~-~~l~~aD~Vi 82 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAK------GIADRLVLLDLSEGTKGATMDLEIFNLPNVEI----SKDL-SASAHSKVVI 82 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECCC-----CHHHHHHHTCTTEEE----ESCG-GGGTTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCCCEEEEEcCCcchHHHHHHHhhhcCCCeEE----eCCH-HHHCCCCEEE
Confidence 38999999999999999999877 76 7776665432 112222211 1221 2466 7789999999
Q ss_pred EcccCc-------------h--HHHHHHHHHhcCCCCcEEEEeC
Q 021218 184 LLISDA-------------A--QADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 184 Lavp~~-------------~--~~~vi~ei~~~mk~gaiLid~a 212 (316)
++.-.. . ..++++++.++. |+++|+.++
T Consensus 83 ~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~s 125 (303)
T 2i6t_A 83 FTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVAS 125 (303)
T ss_dssp ECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECS
T ss_pred EcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcC
Confidence 997221 1 122445555554 777766543
No 242
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.29 E-value=0.00086 Score=63.73 Aligned_cols=80 Identities=9% Similarity=0.016 Sum_probs=57.9
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEEEEEecCCc-ccHHHHHHCCceecCCCcCCHHhhhcc--CCEEEEccc
Q 021218 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISG--SDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~-AlA~~Lr~~~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~t~~~~~e~i~~--ADIViLavp 187 (316)
.+|||||+|.+|. .++..++.. +.+++...+++. +..+.+.+.|... .+.+.++++++ .|+|++++|
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~------~~~lvav~d~~~~~a~~~a~~~~~~~---~~~~~~~ll~~~~vD~V~I~tp 97 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRA------GARLAGFHEKDDALAAEFSAVYADAR---RIATAEEILEDENIGLIVSAAV 97 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHT------TCEEEEEECSCHHHHHHHHHHSSSCC---EESCHHHHHTCTTCCEEEECCC
T ss_pred cEEEEECcCHHHHHHHHHHhhcC------CcEEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEEeCC
Confidence 5899999999994 567777665 777654444443 3345666776431 25689999875 899999999
Q ss_pred CchHHHHHHHHHh
Q 021218 188 DAAQADNYEKIFS 200 (316)
Q Consensus 188 ~~~~~~vi~ei~~ 200 (316)
+..+.+++.+.+.
T Consensus 98 ~~~H~~~~~~al~ 110 (361)
T 3u3x_A 98 SSERAELAIRAMQ 110 (361)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 9998887765544
No 243
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.28 E-value=0.00091 Score=63.54 Aligned_cols=84 Identities=17% Similarity=0.217 Sum_probs=57.3
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC-CceecCCCcCCHHhhhc--cCCEEEEccc
Q 021218 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETIS--GSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~A-lA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~-G~~~~~~t~~~~~e~i~--~ADIViLavp 187 (316)
.+|||||+|.||.. .+..+++. .+.+++...+.+... .+.+. +... +.+.+++++ +.|+|++|+|
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~--~~~~~~~~~~----~~~~~~ll~~~~~D~V~i~tp 76 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSV-----PGLNLAFVASRDEEK--VKRDLPDVTV----IASPEAAVQHPDVDLVVIASP 76 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTS-----TTEEEEEEECSCHHH--HHHHCTTSEE----ESCHHHHHTCTTCSEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhC-----CCeEEEEEEcCCHHH--HHhhCCCCcE----ECCHHHHhcCCCCCEEEEeCC
Confidence 58999999999997 67777654 145665444444322 22333 3332 568999998 7899999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEE
Q 021218 188 DAAQADNYEKIFSCMKPNSILG 209 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~gaiLi 209 (316)
+..+.++..+.+. .|+.|.
T Consensus 77 ~~~H~~~~~~al~---aGk~Vl 95 (364)
T 3e82_A 77 NATHAPLARLALN---AGKHVV 95 (364)
T ss_dssp GGGHHHHHHHHHH---TTCEEE
T ss_pred hHHHHHHHHHHHH---CCCcEE
Confidence 9999887765443 455444
No 244
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.28 E-value=0.00041 Score=65.99 Aligned_cols=96 Identities=14% Similarity=0.165 Sum_probs=59.2
Q ss_pred ccCCC-CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCc-eecCC-CcCCHHhhhccCCEEE
Q 021218 107 AFNGI-NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF-TEENG-TLGDIYETISGSDLVL 183 (316)
Q Consensus 107 ~l~G~-kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~-~~~~~-t~~~~~e~i~~ADIVi 183 (316)
.++|- |||.|||.|.+|..+++.|.+ ..+|.++++.. +..+.+.+..- ..-|- ....+.++++++|+||
T Consensus 11 ~~~g~~mkilvlGaG~vG~~~~~~L~~-------~~~v~~~~~~~-~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi 82 (365)
T 3abi_A 11 HIEGRHMKVLILGAGNIGRAIAWDLKD-------EFDVYIGDVNN-ENLEKVKEFATPLKVDASNFDKLVEVMKEFELVI 82 (365)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHTT-------TSEEEEEESCH-HHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred cccCCccEEEEECCCHHHHHHHHHHhc-------CCCeEEEEcCH-HHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEE
Confidence 34442 689999999999999998865 45777776653 33333332211 10010 1123567889999999
Q ss_pred EcccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 184 LLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 184 Lavp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
.++|+.....+.+...+ .|.-++|.+.
T Consensus 83 ~~~p~~~~~~v~~~~~~---~g~~yvD~s~ 109 (365)
T 3abi_A 83 GALPGFLGFKSIKAAIK---SKVDMVDVSF 109 (365)
T ss_dssp ECCCGGGHHHHHHHHHH---HTCEEEECCC
T ss_pred EecCCcccchHHHHHHh---cCcceEeeec
Confidence 99999877666664433 3566666654
No 245
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.26 E-value=0.00023 Score=68.07 Aligned_cols=98 Identities=10% Similarity=0.034 Sum_probs=67.6
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCcee---cCCCcCCHHhhhccCCEEE
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE---ENGTLGDIYETISGSDLVL 183 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~---~~~t~~~~~e~i~~ADIVi 183 (316)
.+++ +++.|+|.|.+|.+.++.++.. |.+|++.+++. ...+.+.+.+... .+....++.+.++++|+||
T Consensus 164 ~l~~-~~VlViGaGgvG~~aa~~a~~~------Ga~V~v~dr~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI 235 (361)
T 1pjc_A 164 GVKP-GKVVILGGGVVGTEAAKMAVGL------GAQVQIFDINV-ERLSYLETLFGSRVELLYSNSAEIETAVAEADLLI 235 (361)
T ss_dssp TBCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH-HHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEE
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCH-HHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEE
Confidence 4778 9999999999999999999998 98877776653 3344444433210 0000124556778999999
Q ss_pred EcccCchH--HHH-HHHHHhcCCCCcEEEEeC
Q 021218 184 LLISDAAQ--ADN-YEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 184 Lavp~~~~--~~v-i~ei~~~mk~gaiLid~a 212 (316)
-+++.... ..+ .++..+.|+++.+|+|++
T Consensus 236 ~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 236 GAVLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp ECCCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred ECCCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 99975431 122 345677899999999875
No 246
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.26 E-value=0.00052 Score=64.64 Aligned_cols=83 Identities=8% Similarity=0.149 Sum_probs=55.7
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC-CceecCCCcCCHHhhhcc--CCEEEEccc
Q 021218 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETISG--SDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~A-lA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~-G~~~~~~t~~~~~e~i~~--ADIViLavp 187 (316)
.+|||||+|.||.. .+..+++. .+.+++...+.+....+ .+. +.. .+.+.++++++ .|+|++++|
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~-----~~~~l~av~d~~~~~~~--~~~~~~~----~~~~~~~ll~~~~vD~V~i~tp 76 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGT-----PGLELAGVSSSDASKVH--ADWPAIP----VVSDPQMLFNDPSIDLIVIPTP 76 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTS-----TTEEEEEEECSCHHHHH--TTCSSCC----EESCHHHHHHCSSCCEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhC-----CCcEEEEEECCCHHHHH--hhCCCCc----eECCHHHHhcCCCCCEEEEeCC
Confidence 58999999999997 77777764 14565544444432221 222 222 25689999875 899999999
Q ss_pred CchHHHHHHHHHhcCCCCcEE
Q 021218 188 DAAQADNYEKIFSCMKPNSIL 208 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~gaiL 208 (316)
+..+.++..+.+. .|+-|
T Consensus 77 ~~~H~~~~~~al~---aGkhV 94 (352)
T 3kux_A 77 NDTHFPLAQSALA---AGKHV 94 (352)
T ss_dssp TTTHHHHHHHHHH---TTCEE
T ss_pred hHHHHHHHHHHHH---CCCcE
Confidence 9999887765543 45543
No 247
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.22 E-value=0.00049 Score=65.21 Aligned_cols=78 Identities=10% Similarity=0.132 Sum_probs=54.5
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC-CceecCCCcCCHHhhhcc--CCEEEEccc
Q 021218 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETISG--SDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~A-lA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~-G~~~~~~t~~~~~e~i~~--ADIViLavp 187 (316)
.+|||||+|.||.. .+..+++. .+.+++...+.+... .+.+. +... +.+.++++++ .|+|++|+|
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~--~~~~~~~~~~----~~~~~~ll~~~~vD~V~i~tp 74 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTN-----PHFELYKIVERSKEL--SKERYPQASI----VRSFKELTEDPEIDLIVVNTP 74 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHC-----TTEEEEEEECSSCCG--GGTTCTTSEE----ESCSHHHHTCTTCCEEEECSC
T ss_pred eEEEEECCCHHHHHHHHHHHhhC-----CCeEEEEEEcCCHHH--HHHhCCCCce----ECCHHHHhcCCCCCEEEEeCC
Confidence 58999999999997 67777654 145655444444332 23344 3332 5688999876 899999999
Q ss_pred CchHHHHHHHHHh
Q 021218 188 DAAQADNYEKIFS 200 (316)
Q Consensus 188 ~~~~~~vi~ei~~ 200 (316)
+..+.++..+.+.
T Consensus 75 ~~~H~~~~~~al~ 87 (362)
T 3fhl_A 75 DNTHYEYAGMALE 87 (362)
T ss_dssp GGGHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 9999887765544
No 248
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.21 E-value=0.0022 Score=60.05 Aligned_cols=67 Identities=15% Similarity=0.145 Sum_probs=43.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHH--HCC-------ceecCCCcCCHHhhhccCCE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEAR--AAG-------FTEENGTLGDIYETISGSDL 181 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~--~~G-------~~~~~~t~~~~~e~i~~ADI 181 (316)
+||+|||.|.||.+++..+... |+ +|.+.+.+.++....+. ..+ ... ....+. +.+++||+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~------g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i--~~t~d~-~a~~~aD~ 73 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK------ELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRV--TGTNNY-ADTANSDV 73 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCE--EEESCG-GGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEE--EECCCH-HHHCCCCE
Confidence 6999999999999999999887 76 75554443322211111 111 100 012455 78999999
Q ss_pred EEEccc
Q 021218 182 VLLLIS 187 (316)
Q Consensus 182 ViLavp 187 (316)
||+++.
T Consensus 74 Vi~a~g 79 (309)
T 1ur5_A 74 IVVTSG 79 (309)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 999984
No 249
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=97.20 E-value=0.0014 Score=61.46 Aligned_cols=69 Identities=17% Similarity=0.142 Sum_probs=44.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCcccHHHHH----H---CCceecCCCcCCHHhhhccCCEE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR----A---AGFTEENGTLGDIYETISGSDLV 182 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~~s~~~A~----~---~G~~~~~~t~~~~~e~i~~ADIV 182 (316)
|||+|||.|.+|.++|..|... |+ ++.+.+++.++....+. . .+....-....+ .+++++||+|
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~------~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiV 73 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN------LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEII 73 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------SCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEE
Confidence 6899999999999999999888 76 77666655332211111 1 111000001235 7899999999
Q ss_pred EEccc
Q 021218 183 LLLIS 187 (316)
Q Consensus 183 iLavp 187 (316)
|++..
T Consensus 74 Viaag 78 (294)
T 1oju_A 74 VVTAG 78 (294)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99974
No 250
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.19 E-value=0.0002 Score=64.53 Aligned_cols=81 Identities=12% Similarity=0.275 Sum_probs=52.0
Q ss_pred CEEEEEcccchHHHHHHH--HHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCc
Q 021218 112 NQIGVIGWGSQGPAQAQN--LRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~--Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~ 189 (316)
++++|||.|++|.++++. .... |++++...+.++..... ...|+... ...++++++++.|+|++|+|..
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~------g~~iVg~~D~dp~k~g~-~i~gv~V~--~~~dl~eli~~~D~ViIAvPs~ 156 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNN------NTKISMAFDINESKIGT-EVGGVPVY--NLDDLEQHVKDESVAILTVPAV 156 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------------CCEEEEEESCTTTTTC-EETTEEEE--EGGGHHHHCSSCCEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccC------CcEEEEEEeCCHHHHHh-HhcCCeee--chhhHHHHHHhCCEEEEecCch
Confidence 689999999999999994 3333 67766555555432211 11233211 1357888887779999999998
Q ss_pred hHHHHHHHHHhc
Q 021218 190 AQADNYEKIFSC 201 (316)
Q Consensus 190 ~~~~vi~ei~~~ 201 (316)
...++.+.+.+.
T Consensus 157 ~~~ei~~~l~~a 168 (215)
T 2vt3_A 157 AAQSITDRLVAL 168 (215)
T ss_dssp HHHHHHHHHHHT
T ss_pred hHHHHHHHHHHc
Confidence 887777776543
No 251
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=97.19 E-value=0.0026 Score=60.22 Aligned_cols=107 Identities=16% Similarity=0.246 Sum_probs=82.6
Q ss_pred HCCceecCCCcCCHHhhhccCCEEEEcccCch-HHHHHHHHHhcCCCCcEEEEeCCch----hhhhhccccCCCCCccEE
Q 021218 159 AAGFTEENGTLGDIYETISGSDLVLLLISDAA-QADNYEKIFSCMKPNSILGLSHGFL----LGHLQSMGLDFPKNIGVI 233 (316)
Q Consensus 159 ~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~-~~~vi~ei~~~mk~gaiLid~aGv~----l~~l~~~~~~~~~~i~vI 233 (316)
..|+.. +.|..|+++++|++|+=+|-.. +.++++++.++++.|++|...+-++ ...++. +. ++|+.+.
T Consensus 126 daGVkV----tsDD~EAvk~AEi~IlftPfG~~t~~Iakkii~~lpEgAII~nTCTipp~~ly~~le~--l~-R~DvgIs 198 (358)
T 2b0j_A 126 DVGLKV----TSDDREAVEGADIVITWLPKGNKQPDIIKKFADAIPEGAIVTHACTIPTTKFAKIFKD--LG-REDLNIT 198 (358)
T ss_dssp GGTCEE----ESCHHHHHTTCSEEEECCTTCTTHHHHHHHHGGGSCTTCEEEECSSSCHHHHHHHHHH--TT-CTTSEEE
T ss_pred HcCcEe----ecchHHHhcCCCEEEEecCCCCCcHHHHHHHHhhCcCCCEEecccCCCHHHHHHHHHH--hC-cccCCee
Confidence 367764 5688899999999999999988 6679999999999999999888764 122332 23 6789999
Q ss_pred EeccCCCchhhHHHHhcCccccCCCceEEEeeccCCCHHHHHHHHHHHHHcCCC
Q 021218 234 AVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 234 ~vhPn~pg~~~r~lf~~G~e~~G~G~~~iiap~~d~~~~a~e~a~~l~~alG~~ 287 (316)
..|| +..+.+ .| .. +.-...++++.++...+|+++.|..
T Consensus 199 S~HP-aaVPgt-----~G-------q~--~~g~~yAtEEqIeklveLaksa~k~ 237 (358)
T 2b0j_A 199 SYHP-GCVPEM-----KG-------QV--YIAEGYASEEAVNKLYEIGKIARGK 237 (358)
T ss_dssp ECBC-SSCTTT-----CC-------CE--EEEESSSCHHHHHHHHHHHHHHHSC
T ss_pred ccCC-CCCCCC-----CC-------cc--ccccccCCHHHHHHHHHHHHHhCCC
Confidence 9999 333332 24 22 3556689999999999999999954
No 252
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=97.18 E-value=0.0014 Score=62.49 Aligned_cols=96 Identities=15% Similarity=0.181 Sum_probs=60.0
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCC-cccHHHHHHCCceec-----------CC--C-cCCHHhh
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEE-----------NG--T-LGDIYET 175 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~-~~s~~~A~~~G~~~~-----------~~--t-~~~~~e~ 175 (316)
|.+|||+|+|.||..+++.|.+. .+++++...+.. ..+...+.+.|+... +. . ..+.+++
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~-----~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~ 75 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQ-----DDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDM 75 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS-----SSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHH
T ss_pred CeEEEEEeECHHHHHHHHHHHcC-----CCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHH
Confidence 46899999999999999998763 156654443333 222233333321100 00 0 0245667
Q ss_pred hccCCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeCCc
Q 021218 176 ISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (316)
Q Consensus 176 i~~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~aGv 214 (316)
+.++|+|+.|+|.....+.....++ .|+.++|.++-
T Consensus 76 ~~~vDvV~~atp~~~~~~~a~~~l~---aG~~VId~sp~ 111 (337)
T 1cf2_P 76 LDEADIVIDCTPEGIGAKNLKMYKE---KGIKAIFQGGE 111 (337)
T ss_dssp HHTCSEEEECCSTTHHHHHHHHHHH---HTCCEEECTTS
T ss_pred hcCCCEEEECCCchhhHHHHHHHHH---cCCEEEEecCC
Confidence 7899999999999988777765543 35557776653
No 253
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.14 E-value=0.00035 Score=64.70 Aligned_cols=85 Identities=11% Similarity=0.159 Sum_probs=56.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEcccCc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLavp~~ 189 (316)
.+|||||+|.||...++.+... . ...+.+++...+++. .+.+.|+. ..+.+|+++ +.|+|++++|+.
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~-~-~~~~~~lvav~d~~~----~a~~~g~~-----~~~~~ell~~~~vD~V~i~tp~~ 76 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDP-R-SAAFLNLIGFVSRRE----LGSLDEVR-----QISLEDALRSQEIDVAYICSESS 76 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSH-H-HHTTEEEEEEECSSC----CCEETTEE-----BCCHHHHHHCSSEEEEEECSCGG
T ss_pred ceEEEEEEcHHHHHHHHHHhcc-c-cCCCEEEEEEECchH----HHHHcCCC-----CCCHHHHhcCCCCCEEEEeCCcH
Confidence 6899999999999999888652 0 011455443333322 12234543 358899886 689999999999
Q ss_pred hHHHHHHHHHhcCCCCc-EEEE
Q 021218 190 AQADNYEKIFSCMKPNS-ILGL 210 (316)
Q Consensus 190 ~~~~vi~ei~~~mk~ga-iLid 210 (316)
.+.++..+.++ .|+ +++.
T Consensus 77 ~H~~~~~~al~---aGkhVl~E 95 (294)
T 1lc0_A 77 SHEDYIRQFLQ---AGKHVLVE 95 (294)
T ss_dssp GHHHHHHHHHH---TTCEEEEE
T ss_pred hHHHHHHHHHH---CCCcEEEe
Confidence 98887765543 455 4444
No 254
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.13 E-value=0.0015 Score=61.65 Aligned_cols=93 Identities=12% Similarity=0.158 Sum_probs=54.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCcccHHHHHH--CCcee-cCC-CcCCHHhhhccCCEEEEc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AGFTE-ENG-TLGDIYETISGSDLVLLL 185 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~~s~~~A~~--~G~~~-~~~-t~~~~~e~i~~ADIViLa 185 (316)
+||+|||.|.+|.+++..|... ++ ++.+.+.+..+....+.+ .+... .+- ...+..+.+++||+||++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~------~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ 81 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR------QTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVT 81 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEc
Confidence 7899999999999999999887 65 666665543322222222 22100 000 011235679999999999
Q ss_pred ccCch----------------HHHHHHHHHhcCCCCcEEEEe
Q 021218 186 ISDAA----------------QADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 186 vp~~~----------------~~~vi~ei~~~mk~gaiLid~ 211 (316)
.+... ..++.+++.++ .|+++++.+
T Consensus 82 ~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~ 122 (318)
T 1y6j_A 82 AGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVV 122 (318)
T ss_dssp CCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEEC
T ss_pred CCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEe
Confidence 87543 12233445555 578877665
No 255
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.13 E-value=0.00066 Score=67.42 Aligned_cols=84 Identities=7% Similarity=0.116 Sum_probs=58.5
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEEEEecCCc-ccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEE
Q 021218 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETIS--GSDLVLL 184 (316)
Q Consensus 112 kkIGIIG~----G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViL 184 (316)
.+|||||+ |.||...+..|++. ..+.+++...+.+. +..+.+.+.|+.. ...+.+.+++++ +.|+|++
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~----~~~~~lvav~d~~~~~a~~~a~~~g~~~-~~~~~d~~ell~~~~vD~V~I 114 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQL----SSQFQIVALYNPTLKSSLQTIEQLQLKH-ATGFDSLESFAQYKDIDMIVV 114 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHT----TTTEEEEEEECSCHHHHHHHHHHTTCTT-CEEESCHHHHHHCTTCSEEEE
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhc----CCCeEEEEEEeCCHHHHHHHHHHcCCCc-ceeeCCHHHHhcCCCCCEEEE
Confidence 68999999 99999999998763 11566554444443 3345566677530 012568999985 6899999
Q ss_pred cccCchHHHHHHHHHh
Q 021218 185 LISDAAQADNYEKIFS 200 (316)
Q Consensus 185 avp~~~~~~vi~ei~~ 200 (316)
++|+..+.+++.+.+.
T Consensus 115 ~tp~~~H~~~~~~al~ 130 (479)
T 2nvw_A 115 SVKVPEHYEVVKNILE 130 (479)
T ss_dssp CSCHHHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHH
Confidence 9999998887665443
No 256
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.12 E-value=0.00072 Score=64.23 Aligned_cols=86 Identities=12% Similarity=0.077 Sum_probs=61.6
Q ss_pred CEEEEEc-ccchHHH-HH----HHHHhhhhhhcCC-cE----------EEEEecCCcccHHHHHHCCceecCCCcCCHHh
Q 021218 112 NQIGVIG-WGSQGPA-QA----QNLRDSLAEAKSD-IV----------VKVGLRKGSRSFAEARAAGFTEENGTLGDIYE 174 (316)
Q Consensus 112 kkIGIIG-~G~mG~A-lA----~~Lr~~~~~~g~G-~~----------Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e 174 (316)
.+||||| +|.||.. .+ ..+++. + .. +.+.+++.++..+.+++.|+.. .+.+.++
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~------~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~---~~~~~~~ 77 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQ------GGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIAR---WTTDLDA 77 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHH------TSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCC---EESCHHH
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhc------CceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCc---ccCCHHH
Confidence 4799999 9999998 77 777765 3 22 1255665555566777888741 1568999
Q ss_pred hhcc--CCEEEEcccCchHHHHHHHHHhcCCCCcEEE
Q 021218 175 TISG--SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (316)
Q Consensus 175 ~i~~--ADIViLavp~~~~~~vi~ei~~~mk~gaiLi 209 (316)
++++ .|+|++++|+..+.++..+.+ +.|+-|.
T Consensus 78 ll~~~~iD~V~i~tp~~~h~~~~~~al---~~Gk~V~ 111 (383)
T 3oqb_A 78 ALADKNDTMFFDAATTQARPGLLTQAI---NAGKHVY 111 (383)
T ss_dssp HHHCSSCCEEEECSCSSSSHHHHHHHH---TTTCEEE
T ss_pred HhcCCCCCEEEECCCchHHHHHHHHHH---HCCCeEE
Confidence 9865 899999999998888776554 3465544
No 257
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.12 E-value=0.00053 Score=64.22 Aligned_cols=80 Identities=10% Similarity=0.047 Sum_probs=54.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCc--ccH---HHHHHCCceecCCCcCCHHhhhcc--CCEEEE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS--RSF---AEARAAGFTEENGTLGDIYETISG--SDLVLL 184 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~--~s~---~~A~~~G~~~~~~t~~~~~e~i~~--ADIViL 184 (316)
.+|||||+|.+|...++.+ .. +.+++...+.+. +.. +.+.+.|+.. ..+.+.+|++++ .|+|++
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~------~~~lvav~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~~vD~V~I 73 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DE------ECSITGIAPGVPEEDLSKLEKAISEMNIKP--KKYNNWWEMLEKEKPDILVI 73 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CT------TEEEEEEECSSTTCCCHHHHHHHHTTTCCC--EECSSHHHHHHHHCCSEEEE
T ss_pred eEEEEEccchhHHHHHHhc-CC------CcEEEEEecCCchhhHHHHHHHHHHcCCCC--cccCCHHHHhcCCCCCEEEE
Confidence 6999999999999777776 44 677654444432 222 2223346521 125789999864 899999
Q ss_pred cccCchHHHHHHHHHh
Q 021218 185 LISDAAQADNYEKIFS 200 (316)
Q Consensus 185 avp~~~~~~vi~ei~~ 200 (316)
++|+..+.++..+.+.
T Consensus 74 ~tp~~~H~~~~~~al~ 89 (337)
T 3ip3_A 74 NTVFSLNGKILLEALE 89 (337)
T ss_dssp CSSHHHHHHHHHHHHH
T ss_pred eCCcchHHHHHHHHHH
Confidence 9999998887765544
No 258
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.11 E-value=0.0026 Score=60.62 Aligned_cols=95 Identities=16% Similarity=0.143 Sum_probs=59.9
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCc-ccHHHHHHCCceecCC-------------CcCCHHhhh
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENG-------------TLGDIYETI 176 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~-------------t~~~~~e~i 176 (316)
|.+|||+|+|.||..+++.|.+. .+++++...+... .....+.+.|+....+ ...+.+++.
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~-----p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~ 75 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQ-----PDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI 75 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH
T ss_pred CeEEEEEecCHHHHHHHHHHHcC-----CCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhh
Confidence 36899999999999999998764 1456544444332 2334555555432100 011334555
Q ss_pred ccCCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 177 ~~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
+++|+|+.|+|.....+..+...+ .|..+++.++
T Consensus 76 ~~vDvV~~aTp~~~s~~~a~~~~~---aG~kvV~~sa 109 (340)
T 1b7g_O 76 KTSDIVVDTTPNGVGAQYKPIYLQ---LQRNAIFQGG 109 (340)
T ss_dssp HHCSEEEECCSTTHHHHHHHHHHH---TTCEEEECTT
T ss_pred cCCCEEEECCCCchhHHHHHHHHH---cCCeEEEeCC
Confidence 689999999999887777665443 4665665544
No 259
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.09 E-value=0.00063 Score=66.49 Aligned_cols=84 Identities=12% Similarity=0.142 Sum_probs=58.2
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEEEEecCCc-ccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEE
Q 021218 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETIS--GSDLVLL 184 (316)
Q Consensus 112 kkIGIIG~----G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViL 184 (316)
.+|||||+ |.||...++.|++. ..+.+++...+.+. +..+.+.+.|+.. .....+.+++++ +.|+|++
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~----~~~~~lvav~d~~~~~~~~~a~~~g~~~-~~~~~~~~~ll~~~~vD~V~i 95 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQL----SSQFQITALYSPKIETSIATIQRLKLSN-ATAFPTLESFASSSTIDMIVI 95 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHT----TTTEEEEEEECSSHHHHHHHHHHTTCTT-CEEESSHHHHHHCSSCSEEEE
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhc----CCCeEEEEEEeCCHHHHHHHHHHcCCCc-ceeeCCHHHHhcCCCCCEEEE
Confidence 58999999 99999999998763 01566554444443 3334566667530 001568999986 6899999
Q ss_pred cccCchHHHHHHHHHh
Q 021218 185 LISDAAQADNYEKIFS 200 (316)
Q Consensus 185 avp~~~~~~vi~ei~~ 200 (316)
++|+..+.++..+.+.
T Consensus 96 ~tp~~~H~~~~~~al~ 111 (438)
T 3btv_A 96 AIQVASHYEVVMPLLE 111 (438)
T ss_dssp CSCHHHHHHHHHHHHH
T ss_pred eCCcHHHHHHHHHHHH
Confidence 9999998886665433
No 260
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=97.09 E-value=0.001 Score=62.46 Aligned_cols=78 Identities=17% Similarity=0.169 Sum_probs=58.8
Q ss_pred cccCCCCEEEEEcccch-HHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEE
Q 021218 106 DAFNGINQIGVIGWGSQ-GPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~m-G~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViL 184 (316)
.+++| +++.|||.|.+ |..+|+.|... |.|..|.+..++ ..++.+.+++||+||.
T Consensus 154 i~l~g-k~vvVvG~s~iVG~p~A~lL~~~----g~~atVtv~h~~-------------------t~~L~~~~~~ADIVI~ 209 (281)
T 2c2x_A 154 ISIAG-AHVVVIGRGVTVGRPLGLLLTRR----SENATVTLCHTG-------------------TRDLPALTRQADIVVA 209 (281)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHTST----TTCCEEEEECTT-------------------CSCHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCcHHHHHHHHHHhcC----CCCCEEEEEECc-------------------hhHHHHHHhhCCEEEE
Confidence 47899 99999999986 99999988764 113466666432 2378899999999999
Q ss_pred cccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 185 avp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
+++-.. ++. .+++|+|++|+|++
T Consensus 210 Avg~p~---~I~--~~~vk~GavVIDVg 232 (281)
T 2c2x_A 210 AVGVAH---LLT--ADMVRPGAAVIDVG 232 (281)
T ss_dssp CSCCTT---CBC--GGGSCTTCEEEECC
T ss_pred CCCCCc---ccC--HHHcCCCcEEEEcc
Confidence 998544 232 23479999999986
No 261
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.06 E-value=0.00056 Score=64.90 Aligned_cols=99 Identities=11% Similarity=0.061 Sum_probs=64.4
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecC---CcccHHHHHH----CCceecCCCcCC---HHh
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK---GSRSFAEARA----AGFTEENGTLGD---IYE 174 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~---~~~s~~~A~~----~G~~~~~~t~~~---~~e 174 (316)
.+++| +++.|+|.|-+|.+++..|.+. |. +|.+..|+ .++..+.+.+ .+....-....+ +.+
T Consensus 150 ~~l~g-k~~lVlGaGG~g~aia~~L~~~------Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~ 222 (315)
T 3tnl_A 150 HDIIG-KKMTICGAGGAATAICIQAALD------GVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRK 222 (315)
T ss_dssp CCCTT-SEEEEECCSHHHHHHHHHHHHT------TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred CCccC-CEEEEECCChHHHHHHHHHHHC------CCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHh
Confidence 46789 9999999999999999999998 98 78888887 3333333332 121100001222 446
Q ss_pred hhccCCEEEEcccCchHHH----HHHHHHhcCCCCcEEEEeC
Q 021218 175 TISGSDLVLLLISDAAQAD----NYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 175 ~i~~ADIViLavp~~~~~~----vi~ei~~~mk~gaiLid~a 212 (316)
.++++|+||-++|...... .+. ....++++.+|.|+.
T Consensus 223 ~l~~aDiIINaTp~Gm~~~~~~~p~~-~~~~l~~~~~V~Dlv 263 (315)
T 3tnl_A 223 EIAESVIFTNATGVGMKPFEGETLLP-SADMLRPELIVSDVV 263 (315)
T ss_dssp HHHTCSEEEECSSTTSTTSTTCCSCC-CGGGCCTTCEEEESC
T ss_pred hhcCCCEEEECccCCCCCCCCCCCCC-cHHHcCCCCEEEEec
Confidence 6789999999999654321 110 133467788888763
No 262
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=97.06 E-value=0.0018 Score=61.23 Aligned_cols=68 Identities=21% Similarity=0.160 Sum_probs=45.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCcccHHHHHH---------CCceecCCCcCCHHhhhccCC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA---------AGFTEENGTLGDIYETISGSD 180 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~~s~~~A~~---------~G~~~~~~t~~~~~e~i~~AD 180 (316)
|||+|||.|.||.++|..+... ++ ++.+.+....+....+.+ ..... ...+..+.+++||
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~------~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v---~~~~~~~a~~~aD 71 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ------DVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRV---TGTNDYGPTEDSD 71 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEE---EEESSSGGGTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEE---EECCCHHHhCCCC
Confidence 6899999999999999999888 75 666666554332211111 01111 0124567899999
Q ss_pred EEEEcccC
Q 021218 181 LVLLLISD 188 (316)
Q Consensus 181 IViLavp~ 188 (316)
+||++...
T Consensus 72 vVii~ag~ 79 (314)
T 3nep_X 72 VCIITAGL 79 (314)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999754
No 263
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.02 E-value=0.00039 Score=65.02 Aligned_cols=92 Identities=13% Similarity=0.039 Sum_probs=62.3
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEE
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViL 184 (316)
.+++| +++.|||.|-+|.+++..|.+. |. +|.+..|+.++..+.+.+.+... ..++.+ + ++|+||.
T Consensus 118 ~~~~~-k~vlvlGaGGaaraia~~L~~~------G~~~v~v~nRt~~ka~~La~~~~~~~----~~~l~~-l-~~DivIn 184 (282)
T 3fbt_A 118 VEIKN-NICVVLGSGGAARAVLQYLKDN------FAKDIYVVTRNPEKTSEIYGEFKVIS----YDELSN-L-KGDVIIN 184 (282)
T ss_dssp CCCTT-SEEEEECSSTTHHHHHHHHHHT------TCSEEEEEESCHHHHHHHCTTSEEEE----HHHHTT-C-CCSEEEE
T ss_pred CCccC-CEEEEECCcHHHHHHHHHHHHc------CCCEEEEEeCCHHHHHHHHHhcCccc----HHHHHh-c-cCCEEEE
Confidence 35789 9999999999999999999998 87 88888887554333333322221 223334 4 8999999
Q ss_pred cccCchHHH----HHHHHHhcCCCCcEEEEeC
Q 021218 185 LISDAAQAD----NYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 185 avp~~~~~~----vi~ei~~~mk~gaiLid~a 212 (316)
++|.....+ .+. ...++++.+|.|+.
T Consensus 185 aTp~Gm~~~~~~~pi~--~~~l~~~~~v~Dlv 214 (282)
T 3fbt_A 185 CTPKGMYPKEGESPVD--KEVVAKFSSAVDLI 214 (282)
T ss_dssp CSSTTSTTSTTCCSSC--HHHHTTCSEEEESC
T ss_pred CCccCccCCCccCCCC--HHHcCCCCEEEEEe
Confidence 998753221 121 12356788888874
No 264
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=96.98 E-value=0.0011 Score=62.13 Aligned_cols=91 Identities=12% Similarity=0.214 Sum_probs=65.7
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEcccC
Q 021218 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (316)
Q Consensus 112 kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLavp~ 188 (316)
.++.|+|. |.||..+++++++. |+++++...+..... .-.|+.. +.+++|+.+ +.|++++++|+
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~------g~~~V~~VnP~~~g~---~i~G~~v----y~sl~el~~~~~~Dv~ii~vp~ 80 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLEC------GTKIVGGVTPGKGGQ---NVHGVPV----FDTVKEAVKETDANASVIFVPA 80 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT------TCCEEEEECTTCTTC---EETTEEE----ESSHHHHHHHHCCCEEEECCCH
T ss_pred CEEEEECCCCCHHHHHHHHHHhC------CCeEEEEeCCCCCCc---eECCEee----eCCHHHHhhcCCCCEEEEccCH
Confidence 46788898 99999999999988 887555554432100 1146653 568888888 89999999999
Q ss_pred chHHHHHHHHHhcCCCCcEEEEeCCchh
Q 021218 189 AAQADNYEKIFSCMKPNSILGLSHGFLL 216 (316)
Q Consensus 189 ~~~~~vi~ei~~~mk~gaiLid~aGv~l 216 (316)
....+++++..+. ....+|+...|+..
T Consensus 81 ~~~~~~v~ea~~~-Gi~~vVi~t~G~~~ 107 (294)
T 2yv1_A 81 PFAKDAVFEAIDA-GIELIVVITEHIPV 107 (294)
T ss_dssp HHHHHHHHHHHHT-TCSEEEECCSCCCH
T ss_pred HHHHHHHHHHHHC-CCCEEEEECCCCCH
Confidence 9999998877654 22335666788863
No 265
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.97 E-value=0.00024 Score=65.59 Aligned_cols=94 Identities=12% Similarity=0.097 Sum_probs=62.7
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCc--------eecCCCcCCHHhhhcc
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF--------TEENGTLGDIYETISG 178 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~--------~~~~~t~~~~~e~i~~ 178 (316)
+++| +++.|+|.|-||.++++.|.+. | +|++..|+.++..+.+.+.+. .. + ..+..+.+.+
T Consensus 125 ~l~~-k~vlV~GaGgiG~aia~~L~~~------G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~-d--~~~~~~~~~~ 193 (287)
T 1nvt_A 125 RVKD-KNIVIYGAGGAARAVAFELAKD------N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEV-K--FSGLDVDLDG 193 (287)
T ss_dssp CCCS-CEEEEECCSHHHHHHHHHHTSS------S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHE-E--EECTTCCCTT
T ss_pred CcCC-CEEEEECchHHHHHHHHHHHHC------C-CEEEEECCHHHHHHHHHHHhhhcccccceeE-E--EeeHHHhhCC
Confidence 5789 9999999999999999999988 8 888887764433333332211 00 0 1233566789
Q ss_pred CCEEEEcccCchHHH----HHHHHHhcCCCCcEEEEeC
Q 021218 179 SDLVLLLISDAAQAD----NYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 179 ADIViLavp~~~~~~----vi~ei~~~mk~gaiLid~a 212 (316)
+|+||.+++...... .+. -.+.++++.+++|+.
T Consensus 194 ~DilVn~ag~~~~~~~~~~~~~-~~~~l~~~~~v~Dv~ 230 (287)
T 1nvt_A 194 VDIIINATPIGMYPNIDVEPIV-KAEKLREDMVVMDLI 230 (287)
T ss_dssp CCEEEECSCTTCTTCCSSCCSS-CSTTCCSSSEEEECC
T ss_pred CCEEEECCCCCCCCCCCCCCCC-CHHHcCCCCEEEEee
Confidence 999999998765321 010 124567788888764
No 266
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.97 E-value=0.0033 Score=59.55 Aligned_cols=67 Identities=18% Similarity=0.142 Sum_probs=44.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHH--HCC-------ceecCCCcCCHHhhhccCCE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEAR--AAG-------FTEENGTLGDIYETISGSDL 181 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~--~~G-------~~~~~~t~~~~~e~i~~ADI 181 (316)
+||+|||.|.||.++|..|... ++ ++.+.+...++....+. ... ... ...+..+.+++||+
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~------~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v---~~t~d~~a~~~aDv 76 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIK------QLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKV---RGTNDYKDLENSDV 76 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCE---EEESCGGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEE---EEcCCHHHHCCCCE
Confidence 8999999999999999999887 66 77666655443221111 111 111 01123578999999
Q ss_pred EEEccc
Q 021218 182 VLLLIS 187 (316)
Q Consensus 182 ViLavp 187 (316)
||++..
T Consensus 77 VIi~ag 82 (321)
T 3p7m_A 77 VIVTAG 82 (321)
T ss_dssp EEECCS
T ss_pred EEEcCC
Confidence 999964
No 267
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.97 E-value=0.0025 Score=60.57 Aligned_cols=99 Identities=16% Similarity=0.210 Sum_probs=57.5
Q ss_pred CCCEEEEEcccchHHHHHHHHHhh---hhhhcCCcEEEEEecCCccc-----HH--HHHHC--CceecCCCcCCHHhhhc
Q 021218 110 GINQIGVIGWGSQGPAQAQNLRDS---LAEAKSDIVVKVGLRKGSRS-----FA--EARAA--GFTEENGTLGDIYETIS 177 (316)
Q Consensus 110 G~kkIGIIG~G~mG~AlA~~Lr~~---~~~~g~G~~Vivg~r~~~~s-----~~--~A~~~--G~~~~~~t~~~~~e~i~ 177 (316)
||.+|||||+|.||..+++.+.+. |+..|.+++++...+++... .. .+... +... +..+.+++++
T Consensus 1 ~mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~---~~~d~~~ll~ 77 (327)
T 3do5_A 1 GMIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLR---DDAKAIEVVR 77 (327)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCS---BCCCHHHHHH
T ss_pred CcEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCcccc---CCCCHHHHhc
Confidence 368999999999999999998764 22333466654443333211 11 11111 1110 0127888885
Q ss_pred --cCCEEEEcccCchH-HHHHHHHHhcCCCCcEEEEe
Q 021218 178 --GSDLVLLLISDAAQ-ADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 178 --~ADIViLavp~~~~-~~vi~ei~~~mk~gaiLid~ 211 (316)
+.|+|+.++|+..+ .+..+-+...++.|+.|+..
T Consensus 78 ~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~ 114 (327)
T 3do5_A 78 SADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTS 114 (327)
T ss_dssp HSCCSEEEECCCCC----CHHHHHHHHHTTTCEEEEC
T ss_pred CCCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEec
Confidence 58999999999865 12223344556678876654
No 268
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.96 E-value=0.0016 Score=61.13 Aligned_cols=80 Identities=10% Similarity=0.125 Sum_probs=57.0
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhcc---CCEEEEccc
Q 021218 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG---SDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~-AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~---ADIViLavp 187 (316)
.+|||||+|.||. ..+..+++. .+.+++...+++.+ +.|+.. ..+.++++++ .|+|++++|
T Consensus 26 ~rvgiiG~G~ig~~~~~~~l~~~-----~~~~lvav~d~~~~------~~g~~~----~~~~~~ll~~~~~vD~V~i~tp 90 (330)
T 4ew6_A 26 INLAIVGVGKIVRDQHLPSIAKN-----ANFKLVATASRHGT------VEGVNS----YTTIEAMLDAEPSIDAVSLCMP 90 (330)
T ss_dssp EEEEEECCSHHHHHTHHHHHHHC-----TTEEEEEEECSSCC------CTTSEE----ESSHHHHHHHCTTCCEEEECSC
T ss_pred ceEEEEecCHHHHHHHHHHHHhC-----CCeEEEEEEeCChh------hcCCCc----cCCHHHHHhCCCCCCEEEEeCC
Confidence 5899999999998 788888874 14565544444332 246653 5688998865 899999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEE
Q 021218 188 DAAQADNYEKIFSCMKPNSILG 209 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~gaiLi 209 (316)
+..+.++..+.++ .|+-|.
T Consensus 91 ~~~H~~~~~~al~---aGkhVl 109 (330)
T 4ew6_A 91 PQYRYEAAYKALV---AGKHVF 109 (330)
T ss_dssp HHHHHHHHHHHHH---TTCEEE
T ss_pred cHHHHHHHHHHHH---cCCcEE
Confidence 9988887765543 355443
No 269
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.95 E-value=0.0026 Score=60.46 Aligned_cols=70 Identities=21% Similarity=0.222 Sum_probs=44.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCcccHHHH--HHCCceec--C-CCcCCHHhhhccCCEEEE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEA--RAAGFTEE--N-GTLGDIYETISGSDLVLL 184 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~~s~~~A--~~~G~~~~--~-~t~~~~~e~i~~ADIViL 184 (316)
+||+|||.|.||.++|..|... |+ ++.+.+....+....+ ...+.... + ....+..+.+++||+||+
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~------~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi 79 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ------GITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCI 79 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEE
Confidence 7999999999999999999988 76 6665554322222111 12221100 0 001233568999999999
Q ss_pred ccc
Q 021218 185 LIS 187 (316)
Q Consensus 185 avp 187 (316)
+..
T Consensus 80 ~ag 82 (326)
T 3pqe_A 80 CAG 82 (326)
T ss_dssp CCS
T ss_pred ecc
Confidence 974
No 270
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=96.95 E-value=0.0018 Score=60.77 Aligned_cols=89 Identities=25% Similarity=0.222 Sum_probs=54.9
Q ss_pred EEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHC---------CceecCCCcCCHHhhhccCCEE
Q 021218 113 QIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAA---------GFTEENGTLGDIYETISGSDLV 182 (316)
Q Consensus 113 kIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~---------G~~~~~~t~~~~~e~i~~ADIV 182 (316)
||+|||.|.||.+++..+... ++ ++.+.+.+.++....+.+. ..... ...+. +.+++||+|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~------~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~--~t~d~-~a~~~aD~V 71 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR------GYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRIS--GSNSY-EDMRGSDIV 71 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH------TCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEE--EESCG-GGGTTCSEE
T ss_pred CEEEECcCHHHHHHHHHHHhC------CCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEE--ECCCH-HHhCCCCEE
Confidence 689999999999999988877 66 5666665543222112111 11110 11354 689999999
Q ss_pred EEcccCch----------------HHHHHHHHHhcCCCCcEEEEe
Q 021218 183 LLLISDAA----------------QADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 183 iLavp~~~----------------~~~vi~ei~~~mk~gaiLid~ 211 (316)
|++.+... ..++++++.++ .|+++++.+
T Consensus 72 i~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~ 115 (308)
T 2d4a_B 72 LVTAGIGRKPGMTREQLLEANANTMADLAEKIKAY-AKDAIVVIT 115 (308)
T ss_dssp EECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred EEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEe
Confidence 99976443 22344455555 377766654
No 271
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=96.95 E-value=0.0018 Score=60.64 Aligned_cols=91 Identities=13% Similarity=0.241 Sum_probs=65.1
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhc--c-CCEEEEccc
Q 021218 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--G-SDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~--~-ADIViLavp 187 (316)
.++.|+|. |.||..+++++++. |+++++...+..... .-.|+.. +.+++|+.+ . .|++++++|
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~------g~~~v~~VnP~~~g~---~i~G~~v----y~sl~el~~~~~~~DvaIi~vp 80 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEY------GTKVVAGVTPGKGGS---EVHGVPV----YDSVKEALAEHPEINTSIVFVP 80 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTTC---EETTEEE----ESSHHHHHHHCTTCCEEEECCC
T ss_pred CEEEEECCCCCHHHHHHHHHHhC------CCcEEEEeCCCCCCc---eECCEee----eCCHHHHhhcCCCCCEEEEecC
Confidence 46777797 99999999999998 888555555432100 1146653 567888876 4 999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEeCCchh
Q 021218 188 DAAQADNYEKIFSCMKPNSILGLSHGFLL 216 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~gaiLid~aGv~l 216 (316)
+....+++++..+. ....+|+...|+..
T Consensus 81 ~~~~~~~v~ea~~~-Gi~~vVi~t~G~~~ 108 (297)
T 2yv2_A 81 APFAPDAVYEAVDA-GIRLVVVITEGIPV 108 (297)
T ss_dssp GGGHHHHHHHHHHT-TCSEEEECCCCCCH
T ss_pred HHHHHHHHHHHHHC-CCCEEEEECCCCCH
Confidence 99999999887654 22335667888853
No 272
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.94 E-value=0.0033 Score=59.67 Aligned_cols=67 Identities=19% Similarity=0.175 Sum_probs=45.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHH----HH-----CCceecCCCcCCHHhhhccCCE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEA----RA-----AGFTEENGTLGDIYETISGSDL 181 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A----~~-----~G~~~~~~t~~~~~e~i~~ADI 181 (316)
+||+|||.|.+|.++|..|... |+ ++.+.+...++....+ .. ...... ...+. +++++||+
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~------~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~--~t~d~-~a~~~aDi 78 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLK------ELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFT--GANDY-AAIEGADV 78 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEE--EESSG-GGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEE--EeCCH-HHHCCCCE
Confidence 7999999999999999999888 76 7777766544321111 11 111110 02344 78999999
Q ss_pred EEEccc
Q 021218 182 VLLLIS 187 (316)
Q Consensus 182 ViLavp 187 (316)
||++..
T Consensus 79 VIiaag 84 (324)
T 3gvi_A 79 VIVTAG 84 (324)
T ss_dssp EEECCS
T ss_pred EEEccC
Confidence 999974
No 273
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.92 E-value=0.0012 Score=64.07 Aligned_cols=93 Identities=13% Similarity=0.110 Sum_probs=58.9
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCC---cEEEEEecCCcccHHHHHHCC------ce--ecCCC-cCCHHhhhcc
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSD---IVVKVGLRKGSRSFAEARAAG------FT--EENGT-LGDIYETISG 178 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G---~~Vivg~r~~~~s~~~A~~~G------~~--~~~~t-~~~~~e~i~~ 178 (316)
|++|+|||.|.+|.++++.|.+. | .+|.+..|+.++..+.+.+.+ +. ..|-+ ..+.++++++
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~------g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~ 74 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMN------REVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINE 74 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC------TTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHh
Confidence 68999999999999999999887 6 277777776544333333321 21 10100 1235567777
Q ss_pred --CCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 179 --SDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 179 --ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
+|+||.++++.....+++.... .|..++|++
T Consensus 75 ~~~DvVin~ag~~~~~~v~~a~l~---~g~~vvD~a 107 (405)
T 4ina_A 75 VKPQIVLNIALPYQDLTIMEACLR---TGVPYLDTA 107 (405)
T ss_dssp HCCSEEEECSCGGGHHHHHHHHHH---HTCCEEESS
T ss_pred hCCCEEEECCCcccChHHHHHHHH---hCCCEEEec
Confidence 8999999998876666654332 234445443
No 274
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.92 E-value=0.0022 Score=59.63 Aligned_cols=162 Identities=14% Similarity=0.154 Sum_probs=93.6
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccH---HHHH----HCCceecCCCcCCHHhhhccCCEE
Q 021218 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF---AEAR----AAGFTEENGTLGDIYETISGSDLV 182 (316)
Q Consensus 111 ~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~---~~A~----~~G~~~~~~t~~~~~e~i~~ADIV 182 (316)
|+||+|+| +|.||..+++.+.+. .+++++...+++.... +... ..|+.. ..+++++++++|+|
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~-----~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v----~~dl~~ll~~~DVV 77 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAA-----PDATLVGALDRTGSPQLGQDAGAFLGKQTGVAL----TDDIERVCAEADYL 77 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHC-----TTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBC----BCCHHHHHHHCSEE
T ss_pred ccEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEEecCcccccccHHHHhCCCCCcee----cCCHHHHhcCCCEE
Confidence 37999999 999999999998764 1566655444432110 0000 013332 46889999999999
Q ss_pred EEcccCchHHHHHHHHHhcCCCCc-EEEEeCCchhhhhhccccCCCCCccEEEeccCCCchhh--HHHH-hcCccc-cCC
Q 021218 183 LLLISDAAQADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSV--RRLY-VQGKEI-NGA 257 (316)
Q Consensus 183 iLavp~~~~~~vi~ei~~~mk~ga-iLid~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~--r~lf-~~G~e~-~G~ 257 (316)
|-+++|....+++...+.+ |. +|+=..|+.-..++..... -+... +-..||+.--.. -.+- ...+.+ .++
T Consensus 78 IDfT~p~a~~~~~~~al~~---G~~vVigTTG~s~~~~~~L~~a-a~~~~-vv~a~N~s~Gv~l~~~~~~~aa~~l~~~~ 152 (272)
T 4f3y_A 78 IDFTLPEGTLVHLDAALRH---DVKLVIGTTGFSEPQKAQLRAA-GEKIA-LVFSANMSVGVNVTMKLLEFAAKQFAQGY 152 (272)
T ss_dssp EECSCHHHHHHHHHHHHHH---TCEEEECCCCCCHHHHHHHHHH-TTTSE-EEECSCCCHHHHHHHHHHHHHHHHTSSSC
T ss_pred EEcCCHHHHHHHHHHHHHc---CCCEEEECCCCCHHHHHHHHHH-hccCC-EEEECCCCHHHHHHHHHHHHHHHhcCcCC
Confidence 9999998887777765543 43 4444567763322211112 23444 467788765431 0000 001111 112
Q ss_pred CceEEEeecc-----CCCHHHHHHHHHHHHHcCCC
Q 021218 258 GINSSFAVHQ-----DVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 258 G~~~iiap~~-----d~~~~a~e~a~~l~~alG~~ 287 (316)
.+-. +--|. -.++.|+.+++.+.+..|..
T Consensus 153 diei-~E~HH~~K~DaPSGTA~~la~~i~~~~~~~ 186 (272)
T 4f3y_A 153 DIEI-IEAHHRHKVDAPSGTALMMGETIAAATGRS 186 (272)
T ss_dssp EEEE-EEEECTTCCSSSCHHHHHHHHHHHHTTTCC
T ss_pred CEEE-EEecCCCCCCCCCHHHHHHHHHHHHHhCcc
Confidence 2222 33333 24799999999999888753
No 275
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.90 E-value=0.0044 Score=58.22 Aligned_cols=90 Identities=17% Similarity=0.217 Sum_probs=54.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCcccHHHHHH--C-------CceecCCCcCCHHhhhccCC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--A-------GFTEENGTLGDIYETISGSD 180 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~~s~~~A~~--~-------G~~~~~~t~~~~~e~i~~AD 180 (316)
+||+|||.|.+|.+++..|... +. ++.+.+.+..+....+.. . .... ..+..+++++||
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~------~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v----~~~~~~a~~~aD 76 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQ------SIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRV----KAGEYSDCHDAD 76 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------CSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEE----EECCGGGGTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEE----EeCCHHHhCCCC
Confidence 6999999999999999998877 64 555544332111111111 1 1111 114467899999
Q ss_pred EEEEcccCchH------------HHHH----HHHHhcCCCCcEEEEeC
Q 021218 181 LVLLLISDAAQ------------ADNY----EKIFSCMKPNSILGLSH 212 (316)
Q Consensus 181 IViLavp~~~~------------~~vi----~ei~~~mk~gaiLid~a 212 (316)
+||++.+.... ..++ +++.++ .|+++++.++
T Consensus 77 vVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~t 123 (317)
T 3d0o_A 77 LVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVAT 123 (317)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEec
Confidence 99999854321 1233 344454 6788777653
No 276
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=96.89 E-value=0.0011 Score=63.89 Aligned_cols=86 Identities=9% Similarity=0.078 Sum_probs=59.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCch
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vi-vg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~ 190 (316)
.+|+|||.| +|...+.++++. ..+++++ +.++..++..+.|++.|+.. +.+.++++++.|++++++|...
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~----~~~~elvav~~~~~~~a~~~a~~~gv~~----~~~~~~l~~~~D~v~i~~p~~~ 78 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQP----PEGLELVGLLAQGSARSRELAHAFGIPL----YTSPEQITGMPDIACIVVRSTV 78 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSC----CTTEEEEEEECCSSHHHHHHHHHTTCCE----ESSGGGCCSCCSEEEECCC--C
T ss_pred CEEEEEehH-HHHHHHHHHHhC----CCCeEEEEEECCCHHHHHHHHHHhCCCE----ECCHHHHhcCCCEEEEECCCcc
Confidence 689999999 798877777653 1145654 44555556677888999864 6789999999999999999877
Q ss_pred H----HHHHHHHHhcCCCCcEEE
Q 021218 191 Q----ADNYEKIFSCMKPNSILG 209 (316)
Q Consensus 191 ~----~~vi~ei~~~mk~gaiLi 209 (316)
+ .++..+. |+.|+-|.
T Consensus 79 h~~~~~~~a~~a---l~aGkhVl 98 (372)
T 4gmf_A 79 AGGAGTQLARHF---LARGVHVI 98 (372)
T ss_dssp TTSHHHHHHHHH---HHTTCEEE
T ss_pred cchhHHHHHHHH---HHcCCcEE
Confidence 6 3444333 34465444
No 277
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.85 E-value=0.0026 Score=60.77 Aligned_cols=94 Identities=21% Similarity=0.186 Sum_probs=55.2
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCcccHHHHH--HCC--ceecC--CCcCCHHhhhccCC
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR--AAG--FTEEN--GTLGDIYETISGSD 180 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~~s~~~A~--~~G--~~~~~--~t~~~~~e~i~~AD 180 (316)
.. +||+|||.|.||.++|..+... |+ ++.+.+...++....+. ..+ +.... ....+.++ +++||
T Consensus 20 ~~-~kV~ViGaG~vG~~~a~~la~~------g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daD 91 (330)
T 3ldh_A 20 SY-NKITVVGCDAVGMADAISVLMK------DLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSK 91 (330)
T ss_dssp CC-CEEEEESTTHHHHHHHHHHHHH------CCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCC
Confidence 44 8999999999999999999988 76 66665543222221111 111 10000 01235544 89999
Q ss_pred EEEEcccCc------------hH----HHHHHHHHhcCCCCcEEEEe
Q 021218 181 LVLLLISDA------------AQ----ADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 181 IViLavp~~------------~~----~~vi~ei~~~mk~gaiLid~ 211 (316)
+||++.... .. .++.+++.++ .|+++++.+
T Consensus 92 iVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvv 137 (330)
T 3ldh_A 92 LVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELH 137 (330)
T ss_dssp EEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeC
Confidence 999985321 11 1233455555 678876655
No 278
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=96.83 E-value=0.0035 Score=59.14 Aligned_cols=68 Identities=16% Similarity=0.184 Sum_probs=44.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCcccHHHHHH--CC------ceecCCCcCCHHhhhccCCE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG------FTEENGTLGDIYETISGSDL 181 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~~s~~~A~~--~G------~~~~~~t~~~~~e~i~~ADI 181 (316)
+||+|||.|.+|.+++..|... +. ++.+.+...++....+.+ .. ... ..+..+.+++||+
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~------~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v----~~~~~~a~~~aDv 75 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ------GIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKI----YSGEYSDCKDADL 75 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEE----EECCGGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHcC------CCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEE----EECCHHHhCCCCE
Confidence 7999999999999999998887 64 666555432222212222 11 111 1244678999999
Q ss_pred EEEcccCc
Q 021218 182 VLLLISDA 189 (316)
Q Consensus 182 ViLavp~~ 189 (316)
||++.+..
T Consensus 76 Vii~ag~~ 83 (318)
T 1ez4_A 76 VVITAGAP 83 (318)
T ss_dssp EEECCCC-
T ss_pred EEECCCCC
Confidence 99998654
No 279
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.83 E-value=0.0032 Score=62.63 Aligned_cols=99 Identities=17% Similarity=0.202 Sum_probs=60.7
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcC---CHHhhhccCCE
Q 021218 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG---DIYETISGSDL 181 (316)
Q Consensus 105 ~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~---~~~e~i~~ADI 181 (316)
-..+++ ++|.|||.|.+|.+++..|.+. .+.+|.+..|+.++..+.+...++........ ++.++++++|+
T Consensus 18 ~~~l~~-k~VlIiGAGgiG~aia~~L~~~-----~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~Dv 91 (467)
T 2axq_A 18 EGRHMG-KNVLLLGSGFVAQPVIDTLAAN-----DDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDV 91 (467)
T ss_dssp -----C-EEEEEECCSTTHHHHHHHHHTS-----TTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSE
T ss_pred ccCCCC-CEEEEECChHHHHHHHHHHHhC-----CCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCE
Confidence 356778 9999999999999999999875 04678888876443333333333321000112 34567789999
Q ss_pred EEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 182 ViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
||.++|......+.... ++++..++|..
T Consensus 92 VIn~tp~~~~~~v~~a~---l~~g~~vvd~~ 119 (467)
T 2axq_A 92 VISLIPYTFHPNVVKSA---IRTKTDVVTSS 119 (467)
T ss_dssp EEECSCGGGHHHHHHHH---HHHTCEEEECS
T ss_pred EEECCchhhhHHHHHHH---HhcCCEEEEee
Confidence 99999987655554432 23456666654
No 280
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=96.82 E-value=0.0038 Score=60.99 Aligned_cols=93 Identities=17% Similarity=0.163 Sum_probs=67.7
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecC----Cccc--------HHHHHHCCceecCCCcCCH
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK----GSRS--------FAEARAAGFTEENGTLGDI 172 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~----~~~s--------~~~A~~~G~~~~~~t~~~~ 172 (316)
+.++. .+|.|+|.|.+|.++|+.|... |. +|++.+++ ..+. ...+.+.... ....++
T Consensus 188 ~~l~~-~kVVv~GAGaAG~~iAkll~~~------G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~---~~~~~L 257 (388)
T 1vl6_A 188 KKIEE-VKVVVNGIGAAGYNIVKFLLDL------GVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPE---RLSGDL 257 (388)
T ss_dssp CCTTT-CEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT---CCCSCH
T ss_pred CCCCC-cEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc---CchhhH
Confidence 36777 8999999999999999999998 87 78888876 3221 3344443211 124579
Q ss_pred HhhhccCCEEEEcccCchHHHHH-HHHHhcCCCCcEEEEeC
Q 021218 173 YETISGSDLVLLLISDAAQADNY-EKIFSCMKPNSILGLSH 212 (316)
Q Consensus 173 ~e~i~~ADIViLavp~~~~~~vi-~ei~~~mk~gaiLid~a 212 (316)
.|+++++|++|=+.-| .++ +++...|+++.+|.+.+
T Consensus 258 ~eav~~ADVlIG~Sap----~l~t~emVk~Ma~~pIIfalS 294 (388)
T 1vl6_A 258 ETALEGADFFIGVSRG----NILKPEWIKKMSRKPVIFALA 294 (388)
T ss_dssp HHHHTTCSEEEECSCS----SCSCHHHHTTSCSSCEEEECC
T ss_pred HHHHccCCEEEEeCCC----CccCHHHHHhcCCCCEEEEcC
Confidence 9999999999988764 333 35556688899887765
No 281
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=96.81 E-value=0.0042 Score=58.87 Aligned_cols=72 Identities=14% Similarity=0.148 Sum_probs=44.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCcccHHHHHH--CCcee-cCC-CcCCHHhhhccCCEEEEc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AGFTE-ENG-TLGDIYETISGSDLVLLL 185 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~~s~~~A~~--~G~~~-~~~-t~~~~~e~i~~ADIViLa 185 (316)
+||+|||.|.+|.+++..|... ++ ++.+.+....+....+.+ ..... .+- ...+..+.+++||+||++
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~~------~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ 83 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVLQ------GIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVIT 83 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHcC------CCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEc
Confidence 7999999999999999998876 54 565555432222222221 22100 000 012446789999999999
Q ss_pred ccCc
Q 021218 186 ISDA 189 (316)
Q Consensus 186 vp~~ 189 (316)
.+..
T Consensus 84 ag~~ 87 (326)
T 2zqz_A 84 AGAP 87 (326)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8654
No 282
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.79 E-value=0.0077 Score=57.66 Aligned_cols=92 Identities=22% Similarity=0.148 Sum_probs=58.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHH-HHHH--------------------CCceecCCCcC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFA-EARA--------------------AGFTEENGTLG 170 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~-~A~~--------------------~G~~~~~~t~~ 170 (316)
.+|||+|+|.||..+++.|... .+++++...+....... .++. .++.. ..
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~-----~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v----~~ 73 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQ-----DDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPV----EG 73 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS-----SSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCC----CC
T ss_pred eEEEEECCCHHHHHHHHHHHhC-----CCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEE----CC
Confidence 5999999999999999998764 13565433332222211 1111 12221 12
Q ss_pred CHHhhhccCCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeCCc
Q 021218 171 DIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (316)
Q Consensus 171 ~~~e~i~~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~aGv 214 (316)
+.+++..++|+|+.|+|.....+..+ ..+++.|+.|++.++.
T Consensus 74 ~~~~~~~~vDiV~eatg~~~s~~~a~--~~~l~aG~~VI~sap~ 115 (343)
T 2yyy_A 74 TILDIIEDADIVVDGAPKKIGKQNLE--NIYKPHKVKAILQGGE 115 (343)
T ss_dssp BGGGTGGGCSEEEECCCTTHHHHHHH--HTTTTTTCEEEECTTS
T ss_pred chHHhccCCCEEEECCCccccHHHHH--HHHHHCCCEEEECCCc
Confidence 34455679999999999877655554 4567889888877653
No 283
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.79 E-value=0.005 Score=55.69 Aligned_cols=89 Identities=13% Similarity=0.185 Sum_probs=61.5
Q ss_pred cccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCC-ceecCCCcCCHHhhhcc
Q 021218 100 LFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-FTEENGTLGDIYETISG 178 (316)
Q Consensus 100 ~F~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G-~~~~~~t~~~~~e~i~~ 178 (316)
.|+++ -+|+| +++-|||.|.+|..-++.|.+. |.+|.+.........+...+.| +....+.. .++.+.+
T Consensus 22 ~~Pif-l~L~g-k~VLVVGgG~va~~ka~~Ll~~------GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~--~~~dL~~ 91 (223)
T 3dfz_A 22 MYTVM-LDLKG-RSVLVVGGGTIATRRIKGFLQE------GAAITVVAPTVSAEINEWEAKGQLRVKRKKV--GEEDLLN 91 (223)
T ss_dssp CCEEE-ECCTT-CCEEEECCSHHHHHHHHHHGGG------CCCEEEECSSCCHHHHHHHHTTSCEEECSCC--CGGGSSS
T ss_pred ccccE-EEcCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEECCCCCHHHHHHHHcCCcEEEECCC--CHhHhCC
Confidence 46655 68999 9999999999999999999998 8888777655433333333333 33211121 2345789
Q ss_pred CCEEEEcccCchHHHHHHHH
Q 021218 179 SDLVLLLISDAAQADNYEKI 198 (316)
Q Consensus 179 ADIViLavp~~~~~~vi~ei 198 (316)
+|+||.++.+......+.+.
T Consensus 92 adLVIaAT~d~~~N~~I~~~ 111 (223)
T 3dfz_A 92 VFFIVVATNDQAVNKFVKQH 111 (223)
T ss_dssp CSEEEECCCCTHHHHHHHHH
T ss_pred CCEEEECCCCHHHHHHHHHH
Confidence 99999998887766655544
No 284
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=96.68 E-value=0.0028 Score=62.93 Aligned_cols=72 Identities=19% Similarity=0.212 Sum_probs=45.7
Q ss_pred CEEEEEcccch--HHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCC-------ceecCCCcCCHHhhhccCCEE
Q 021218 112 NQIGVIGWGSQ--GPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-------FTEENGTLGDIYETISGSDLV 182 (316)
Q Consensus 112 kkIGIIG~G~m--G~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G-------~~~~~~t~~~~~e~i~~ADIV 182 (316)
+||+|||.|+| |.++++.+...- .-.| +|++.+.. +...+.....+ ... ..+.|.++++++||+|
T Consensus 6 ~KIaVIGaGs~g~g~~la~~l~~~~--~~~g-eV~L~Di~-~e~le~~~~~~~~l~~~~~~I--~~TtD~~eAl~dADfV 79 (450)
T 3fef_A 6 IKIAYIGGGSQGWARSLMSDLSIDE--RMSG-TVALYDLD-FEAAQKNEVIGNHSGNGRWRY--EAVSTLKKALSAADIV 79 (450)
T ss_dssp EEEEEETTTCSSHHHHHHHHHHHCS--SCCE-EEEEECSS-HHHHHHHHHHHTTSTTSCEEE--EEESSHHHHHTTCSEE
T ss_pred CEEEEECCChhHhHHHHHHHHHhcc--ccCC-eEEEEeCC-HHHHHHHHHHHHHHhccCCeE--EEECCHHHHhcCCCEE
Confidence 69999999998 578888877630 0015 77666554 32222211111 011 1246889999999999
Q ss_pred EEcccCc
Q 021218 183 LLLISDA 189 (316)
Q Consensus 183 iLavp~~ 189 (316)
|+++++.
T Consensus 80 I~airvG 86 (450)
T 3fef_A 80 IISILPG 86 (450)
T ss_dssp EECCCSS
T ss_pred EeccccC
Confidence 9999864
No 285
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.68 E-value=0.0043 Score=58.64 Aligned_cols=66 Identities=20% Similarity=0.151 Sum_probs=43.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCC-c-ccHHHHHH---------CCceecCCCcCCHHhhhccC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-S-RSFAEARA---------AGFTEENGTLGDIYETISGS 179 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~-~-~s~~~A~~---------~G~~~~~~t~~~~~e~i~~A 179 (316)
++|+|||.|.||.++|..+... |+ +|.+.++.. + .....+.+ ..... ...+..+.+++|
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~------g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i---~~t~d~~a~~~a 79 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK------ELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANI---IGTSDYADTADS 79 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCE---EEESCGGGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEE---EEcCCHHHhCCC
Confidence 7999999999999999999988 87 777766552 1 11111110 01000 011235789999
Q ss_pred CEEEEcc
Q 021218 180 DLVLLLI 186 (316)
Q Consensus 180 DIViLav 186 (316)
|+||++.
T Consensus 80 DvVIiaa 86 (315)
T 3tl2_A 80 DVVVITA 86 (315)
T ss_dssp SEEEECC
T ss_pred CEEEEeC
Confidence 9999997
No 286
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.68 E-value=0.0015 Score=60.37 Aligned_cols=89 Identities=15% Similarity=0.135 Sum_probs=61.6
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEccc
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp 187 (316)
.+ +++.|||.|-+|.+++..|.+. |. +|.+.+|+.++..+.+.+.+.... .+. + +.++|+||.++|
T Consensus 118 ~~-~~vlvlGaGgaarav~~~L~~~------G~~~i~v~nRt~~ka~~la~~~~~~~~----~~~-~-~~~~DivInaTp 184 (271)
T 1npy_A 118 KN-AKVIVHGSGGMAKAVVAAFKNS------GFEKLKIYARNVKTGQYLAALYGYAYI----NSL-E-NQQADILVNVTS 184 (271)
T ss_dssp TT-SCEEEECSSTTHHHHHHHHHHT------TCCCEEEECSCHHHHHHHHHHHTCEEE----SCC-T-TCCCSEEEECSS
T ss_pred CC-CEEEEECCcHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHHHcCCccc----hhh-h-cccCCEEEECCC
Confidence 57 8999999999999999999998 86 788888876665666666554311 122 2 578999999999
Q ss_pred CchHHH----H--HHHHHhcCCCCcEEEEeC
Q 021218 188 DAAQAD----N--YEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 188 ~~~~~~----v--i~ei~~~mk~gaiLid~a 212 (316)
...... . +. ...++++.+++|+.
T Consensus 185 ~gm~~~~~~~~~~~~--~~~l~~~~~v~Dlv 213 (271)
T 1npy_A 185 IGMKGGKEEMDLAFP--KAFIDNASVAFDVV 213 (271)
T ss_dssp TTCTTSTTTTSCSSC--HHHHHHCSEEEECC
T ss_pred CCccCccccCCCCCC--HHHcCCCCEEEEee
Confidence 765321 1 11 11234577787764
No 287
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.62 E-value=0.0027 Score=60.13 Aligned_cols=100 Identities=17% Similarity=0.162 Sum_probs=64.0
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecC---CcccHHHHHHC----CceecCCCcCCH---Hh
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK---GSRSFAEARAA----GFTEENGTLGDI---YE 174 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~---~~~s~~~A~~~----G~~~~~~t~~~~---~e 174 (316)
.+++| +++.|+|.|-+|.+++..|.+. |. +|.+..|+ .++..+.+.+. +.........+. .+
T Consensus 144 ~~l~g-k~~lVlGAGGaaraia~~L~~~------G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~ 216 (312)
T 3t4e_A 144 FDMRG-KTMVLLGAGGAATAIGAQAAIE------GIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTE 216 (312)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred CCcCC-CEEEEECcCHHHHHHHHHHHHc------CCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHh
Confidence 35789 9999999999999999999998 87 78888887 33333333322 211000012343 56
Q ss_pred hhccCCEEEEcccCchHHHHHHHH---HhcCCCCcEEEEeC
Q 021218 175 TISGSDLVLLLISDAAQADNYEKI---FSCMKPNSILGLSH 212 (316)
Q Consensus 175 ~i~~ADIViLavp~~~~~~vi~ei---~~~mk~gaiLid~a 212 (316)
.++++|+||-++|......--..+ ...++++.++.|+.
T Consensus 217 ~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v 257 (312)
T 3t4e_A 217 ALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECV 257 (312)
T ss_dssp HHHHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECC
T ss_pred hccCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEec
Confidence 688999999999976421100001 13466777777763
No 288
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=96.61 E-value=0.0044 Score=59.18 Aligned_cols=93 Identities=11% Similarity=0.049 Sum_probs=57.6
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCcee--cCCCcCCHHhhhccCCEEEEcccC
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE--ENGTLGDIYETISGSDLVLLLISD 188 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~--~~~t~~~~~e~i~~ADIViLavp~ 188 (316)
++|+|+| .|.+|..+.+.|.+. ..++++...++.+...+.....+... .+-...+.++ +.++|+|++|+|.
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~-----p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~ 78 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSH-----PYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPH 78 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC-----TTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCT
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-----CCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCc
Confidence 6899999 799999999998865 13465544443221111111111100 0111223334 5789999999999
Q ss_pred chHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 189 AAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 189 ~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
....++..... +.|..++|.++
T Consensus 79 ~~s~~~a~~~~---~aG~~VId~Sa 100 (345)
T 2ozp_A 79 GVFAREFDRYS---ALAPVLVDLSA 100 (345)
T ss_dssp THHHHTHHHHH---TTCSEEEECSS
T ss_pred HHHHHHHHHHH---HCCCEEEEcCc
Confidence 88777776554 46888888876
No 289
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.60 E-value=0.0042 Score=61.22 Aligned_cols=77 Identities=21% Similarity=0.155 Sum_probs=50.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCC-ceecCCCcC---CHHhhhccCCEEEEccc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-FTEENGTLG---DIYETISGSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G-~~~~~~t~~---~~~e~i~~ADIViLavp 187 (316)
++|.|+|.|.||.++++.|.+. |.+|.+..|+.++..+.+.+.+ +........ +..++++++|+||.++|
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~------G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~ 77 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDS------GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP 77 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTT------TCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------cCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCc
Confidence 8999999999999999999988 8888877775432222222222 110000122 34467889999999999
Q ss_pred CchHHHH
Q 021218 188 DAAQADN 194 (316)
Q Consensus 188 ~~~~~~v 194 (316)
......+
T Consensus 78 ~~~~~~i 84 (450)
T 1ff9_A 78 YTFHATV 84 (450)
T ss_dssp --CHHHH
T ss_pred cccchHH
Confidence 8665544
No 290
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=96.58 E-value=0.004 Score=58.50 Aligned_cols=68 Identities=22% Similarity=0.184 Sum_probs=43.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCcccHHHHHH--CC------ceecCCCcCCHHhhhccCCE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG------FTEENGTLGDIYETISGSDL 181 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~~s~~~A~~--~G------~~~~~~t~~~~~e~i~~ADI 181 (316)
+||+|||.|.+|.+++..|... +. ++.+.+...++....+.+ .. ... .. +..+.+++||+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~------~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v---~~-~~~~a~~~aD~ 70 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALL------GVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWV---WA-GSYGDLEGARA 70 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEE---EE-CCGGGGTTEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEE---EE-CCHHHhCCCCE
Confidence 6899999999999999998876 53 566555442222212222 11 111 01 23677999999
Q ss_pred EEEcccCc
Q 021218 182 VLLLISDA 189 (316)
Q Consensus 182 ViLavp~~ 189 (316)
||++.+..
T Consensus 71 Vii~ag~~ 78 (310)
T 2xxj_A 71 VVLAAGVA 78 (310)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99988543
No 291
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.55 E-value=0.00089 Score=60.33 Aligned_cols=83 Identities=10% Similarity=0.219 Sum_probs=55.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcc-cHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEcccC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR-SFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~-s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLavp~ 188 (316)
.+++|||.|++|.++++.+... ..|++++...|.++. ....+.-.|+...+ ..++++.++ +.|++++|+|.
T Consensus 85 ~~V~IvGaG~lG~aLa~~~~~~----~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~--~~dL~~~v~~~~Id~vIIAvPs 158 (212)
T 3keo_A 85 TNVMLVGCGNIGRALLHYRFHD----RNKMQISMAFDLDSNDLVGKTTEDGIPVYG--ISTINDHLIDSDIETAILTVPS 158 (212)
T ss_dssp EEEEEECCSHHHHHHTTCCCCT----TSSEEEEEEEECTTSTTTTCBCTTCCBEEE--GGGHHHHC-CCSCCEEEECSCG
T ss_pred CEEEEECcCHHHHHHHHhhhcc----cCCeEEEEEEeCCchhccCceeECCeEEeC--HHHHHHHHHHcCCCEEEEecCc
Confidence 6899999999999999874211 127777666666554 32210123554321 357788887 48999999999
Q ss_pred chHHHHHHHHHh
Q 021218 189 AAQADNYEKIFS 200 (316)
Q Consensus 189 ~~~~~vi~ei~~ 200 (316)
....++.+.+.+
T Consensus 159 ~~aq~v~d~lv~ 170 (212)
T 3keo_A 159 TEAQEVADILVK 170 (212)
T ss_dssp GGHHHHHHHHHH
T ss_pred hhHHHHHHHHHH
Confidence 887777776554
No 292
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.54 E-value=0.0058 Score=58.28 Aligned_cols=95 Identities=15% Similarity=0.078 Sum_probs=58.0
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEec-CCcccHHHHHHCCcee--------cCCCc--CCHHhhhc-c
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLR-KGSRSFAEARAAGFTE--------ENGTL--GDIYETIS-G 178 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r-~~~~s~~~A~~~G~~~--------~~~t~--~~~~e~i~-~ 178 (316)
++|+||| .|.+|..+++.|.+. .++++....+ +..........++... .+-.. .+.++.++ +
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~-----p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADH-----PMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFED 83 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-----SSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTT
T ss_pred ceEEEECcCCHHHHHHHHHHhcC-----CCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCC
Confidence 6899999 899999999988765 1356544433 2111111121222100 00001 14445546 8
Q ss_pred CCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeCCc
Q 021218 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (316)
Q Consensus 179 ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~aGv 214 (316)
+|+|++|+|.....++...+.+ .|..|+|.++.
T Consensus 84 ~DvV~~atp~~~~~~~a~~~~~---aG~~VId~s~~ 116 (354)
T 1ys4_A 84 VDIVFSALPSDLAKKFEPEFAK---EGKLIFSNASA 116 (354)
T ss_dssp CCEEEECCCHHHHHHHHHHHHH---TTCEEEECCST
T ss_pred CCEEEECCCchHHHHHHHHHHH---CCCEEEECCch
Confidence 9999999999887777776543 57788888764
No 293
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=96.51 E-value=0.0073 Score=57.76 Aligned_cols=93 Identities=15% Similarity=0.203 Sum_probs=58.4
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCC---c--ccHHHHH--HCCceecCCCcC---CHHhhhccC
Q 021218 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG---S--RSFAEAR--AAGFTEENGTLG---DIYETISGS 179 (316)
Q Consensus 111 ~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~---~--~s~~~A~--~~G~~~~~~t~~---~~~e~i~~A 179 (316)
|++|+||| .|.+|..+.+.|.+. .++++.....+. + +.....- -.|.. +-.+. +.++.++++
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~-----p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~--~~~v~~~~~~~~~~~~~ 76 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRH-----PHMNITALTVSAQSNDAGKLISDLHPQLKGIV--ELPLQPMSDISEFSPGV 76 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-----TTEEEEEEEEETTCTTTTSBHHHHCGGGTTTC--CCBEEEESSGGGTCTTC
T ss_pred ceEEEEECCCChHHHHHHHHHHhC-----CCCcEEEEEecCchhhcCCchHHhCccccCcc--ceeEeccCCHHHHhcCC
Confidence 57999999 699999999988873 145554433222 1 1121110 01211 00111 344444899
Q ss_pred CEEEEcccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 180 DIViLavp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
|+||+|+|.....++.+++. +.|..++|.++
T Consensus 77 Dvvf~a~p~~~s~~~~~~~~---~~g~~vIDlSa 107 (337)
T 3dr3_A 77 DVVFLATAHEVSHDLAPQFL---EAGCVVFDLSG 107 (337)
T ss_dssp SEEEECSCHHHHHHHHHHHH---HTTCEEEECSS
T ss_pred CEEEECCChHHHHHHHHHHH---HCCCEEEEcCC
Confidence 99999999888777777664 45888998776
No 294
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.47 E-value=0.0064 Score=55.14 Aligned_cols=88 Identities=18% Similarity=0.204 Sum_probs=57.0
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCC-------------------cccHHHHHHC----
Q 021218 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-------------------SRSFAEARAA---- 160 (316)
Q Consensus 105 ~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~-------------------~~s~~~A~~~---- 160 (316)
...|++ ++|.|||.|.+|..+++.|... |. ++.+.++.. .+....+++.
T Consensus 26 q~~l~~-~~VlVvG~Gg~G~~va~~La~~------Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n 98 (249)
T 1jw9_B 26 QEALKD-SRVLIVGLGGLGCAASQYLASA------GVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN 98 (249)
T ss_dssp HHHHHH-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred HHHHhC-CeEEEEeeCHHHHHHHHHHHHc------CCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC
Confidence 467888 9999999999999999999998 86 666665543 2222222221
Q ss_pred -Cceec--CCCcC--CHHhhhccCCEEEEcccCchHHHHHHHHH
Q 021218 161 -GFTEE--NGTLG--DIYETISGSDLVLLLISDAAQADNYEKIF 199 (316)
Q Consensus 161 -G~~~~--~~t~~--~~~e~i~~ADIViLavp~~~~~~vi~ei~ 199 (316)
++..+ ..... +.++.++++|+||.++........+.+..
T Consensus 99 p~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~ 142 (249)
T 1jw9_B 99 PHIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGC 142 (249)
T ss_dssp TTSEEEEECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHH
T ss_pred CCcEEEEEeccCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHH
Confidence 21110 10111 24567889999999997766555666543
No 295
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=96.46 E-value=0.015 Score=54.49 Aligned_cols=68 Identities=18% Similarity=0.174 Sum_probs=44.2
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCC--cEEEEEecCCcccHHHHHH--CCcee--cCCC--cCCHHhhhccCCEE
Q 021218 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRSFAEARA--AGFTE--ENGT--LGDIYETISGSDLV 182 (316)
Q Consensus 112 kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G--~~Vivg~r~~~~s~~~A~~--~G~~~--~~~t--~~~~~e~i~~ADIV 182 (316)
|||+|||. |.+|.+++..|... + .++.+.+.+. ....+.+ ..... -..+ ..+.++++++||+|
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~------~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvV 72 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS------PLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVV 72 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC------TTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEE
Confidence 58999998 99999999998876 6 4666665543 2222222 21110 0000 13577789999999
Q ss_pred EEccc
Q 021218 183 LLLIS 187 (316)
Q Consensus 183 iLavp 187 (316)
|++..
T Consensus 73 vi~ag 77 (314)
T 1mld_A 73 VIPAG 77 (314)
T ss_dssp EECCS
T ss_pred EECCC
Confidence 99873
No 296
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.44 E-value=0.0073 Score=59.96 Aligned_cols=87 Identities=18% Similarity=0.119 Sum_probs=55.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccH-HHHHHC-C--c-------------------eecCCC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF-AEARAA-G--F-------------------TEENGT 168 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~-~~A~~~-G--~-------------------~~~~~t 168 (316)
.+|||||+|.||..++..+... .++++....+.+.+.. +.+.+. | + .. .
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~-----~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~---v 95 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARM-----QGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIA---V 95 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS-----SSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEE---E
T ss_pred eEEEEECChHHHHHHHHHHhhC-----CCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCce---E
Confidence 5899999999999999887653 1566554444444333 333332 4 0 10 1
Q ss_pred cCCHHhhhc--cCCEEEEcccCch-HHHHHHHHHhcCCCCcEEE
Q 021218 169 LGDIYETIS--GSDLVLLLISDAA-QADNYEKIFSCMKPNSILG 209 (316)
Q Consensus 169 ~~~~~e~i~--~ADIViLavp~~~-~~~vi~ei~~~mk~gaiLi 209 (316)
+.|.+++++ +.|+|++++|+.. ..++..+ .|+.|+-|+
T Consensus 96 ~~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~---AL~AGKHVv 136 (446)
T 3upl_A 96 TDDNDLILSNPLIDVIIDATGIPEVGAETGIA---AIRNGKHLV 136 (446)
T ss_dssp ESCHHHHHTCTTCCEEEECSCCHHHHHHHHHH---HHHTTCEEE
T ss_pred ECCHHHHhcCCCCCEEEEcCCChHHHHHHHHH---HHHcCCcEE
Confidence 468889887 5899999998753 3444433 344576655
No 297
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=96.41 E-value=0.0045 Score=58.13 Aligned_cols=160 Identities=15% Similarity=0.083 Sum_probs=94.0
Q ss_pred CCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccH---HHHH-----HCCceecCCCcCCHHhhhccCC
Q 021218 110 GINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF---AEAR-----AAGFTEENGTLGDIYETISGSD 180 (316)
Q Consensus 110 G~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~---~~A~-----~~G~~~~~~t~~~~~e~i~~AD 180 (316)
.+.+|+|+| .|.||..+++.+.+. .+++++.+.+++.... +... ..|+.. ..++++++.++|
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~-----~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v----~~dl~~ll~~aD 90 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRR-----KDVELCAVLVRKGSSFVDKDASILIGSDFLGVRI----TDDPESAFSNTE 90 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTC-----SSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBC----BSCHHHHTTSCS
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEecCCccccccchHHhhccCcCCcee----eCCHHHHhcCCC
Confidence 336899999 999999999998764 1667655555432110 0011 133432 468999999999
Q ss_pred EEEEcccCchHHHHHHHHHhcCCCCc-EEEEeCCchhhh---hhccccCCCCCccEEEeccCCCchhhH--HHHh-cCcc
Q 021218 181 LVLLLISDAAQADNYEKIFSCMKPNS-ILGLSHGFLLGH---LQSMGLDFPKNIGVIAVCPKGMGPSVR--RLYV-QGKE 253 (316)
Q Consensus 181 IViLavp~~~~~~vi~ei~~~mk~ga-iLid~aGv~l~~---l~~~~~~~~~~i~vI~vhPn~pg~~~r--~lf~-~G~e 253 (316)
+||-.++|....+.+...+.+ |. +|+=..|+.-.. ++. . -+.+. +-..||+.--..- .+-+ ..+-
T Consensus 91 VvIDFT~p~a~~~~~~~~l~~---Gv~vViGTTG~~~e~~~~L~~---a-a~~~~-~~~a~N~SiGv~ll~~l~~~aa~~ 162 (288)
T 3ijp_A 91 GILDFSQPQASVLYANYAAQK---SLIHIIGTTGFSKTEEAQIAD---F-AKYTT-IVKSGNMSLGVNLLANLVKRAAKA 162 (288)
T ss_dssp EEEECSCHHHHHHHHHHHHHH---TCEEEECCCCCCHHHHHHHHH---H-HTTSE-EEECSCCCHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHc---CCCEEEECCCCCHHHHHHHHH---H-hCcCC-EEEECCCcHHHHHHHHHHHHHHHh
Confidence 999999988877777655443 43 444456775322 332 1 12344 4678887654410 0000 0111
Q ss_pred c-cCCCceEEEeecc-----CCCHHHHHHHHHHHHHcCCC
Q 021218 254 I-NGAGINSSFAVHQ-----DVDGRATNVALGWSVALGSP 287 (316)
Q Consensus 254 ~-~G~G~~~iiap~~-----d~~~~a~e~a~~l~~alG~~ 287 (316)
+ .++.+-. +--|. -.++.|+.+++.+.+..|..
T Consensus 163 l~~~~dieI-iE~HH~~K~DaPSGTA~~la~~i~~~~~~~ 201 (288)
T 3ijp_A 163 LDDDFDIEI-YEMHHANKVDSPSGTALLLGQAAAEGRNIM 201 (288)
T ss_dssp SCTTSEEEE-EEEECTTCCCSSCHHHHHHHHHHHHHTTSC
T ss_pred cCCCCCEEE-EEccCCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 1 1122222 33333 26799999999999998843
No 298
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.38 E-value=0.0062 Score=58.46 Aligned_cols=91 Identities=11% Similarity=0.034 Sum_probs=58.1
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCC-cEEEEEecCCcccHHHHHHCCcee----cCCCcCCHHhhhccCCEEEEc
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTE----ENGTLGDIYETISGSDLVLLL 185 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G-~~Vivg~r~~~~s~~~A~~~G~~~----~~~t~~~~~e~i~~ADIViLa 185 (316)
++|+|+| .|.+|..+++.|.+. . ++++...++.+...+.....+... .+-...+ ++.++++|+|++|
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~------p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~a 89 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANH------PHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCC 89 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTC------SSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEEC
T ss_pred cEEEEECcCCHHHHHHHHHHHcC------CCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEc
Confidence 5899999 899999999999875 4 465555444322222222222110 0001122 4455789999999
Q ss_pred ccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 186 ISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 186 vp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
+|.....+.... + +.|..++|.++
T Consensus 90 tp~~~s~~~a~~---~-~aG~~VId~sa 113 (359)
T 1xyg_A 90 LPHGTTQEIIKE---L-PTALKIVDLSA 113 (359)
T ss_dssp CCTTTHHHHHHT---S-CTTCEEEECSS
T ss_pred CCchhHHHHHHH---H-hCCCEEEECCc
Confidence 998887665553 3 67888998876
No 299
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=96.37 E-value=0.008 Score=56.92 Aligned_cols=76 Identities=14% Similarity=0.185 Sum_probs=59.8
Q ss_pred cccCCCCEEEEEccc-chHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEE
Q 021218 106 DAFNGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G-~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViL 184 (316)
.+++| |++.|||-+ ..|..+|..|... +..|.+...+ ..++.+.+++||+||.
T Consensus 175 i~l~G-k~vvViGRS~iVGkPla~LL~~~------~ATVTi~Hs~-------------------T~dl~~~~~~ADIvV~ 228 (303)
T 4b4u_A 175 IEIAG-KHAVVVGRSAILGKPMAMMLLQA------NATVTICHSR-------------------TQNLPELVKQADIIVG 228 (303)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSSHHHHHHTCSEEEE
T ss_pred CCCCC-CEEEEEeccccccchHHHHHHhc------CCEEEEecCC-------------------CCCHHHHhhcCCeEEe
Confidence 58899 999999965 6799999999888 8777665432 2378889999999999
Q ss_pred cccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 185 avp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
++.-.. ++. .+++|+|++|+|++
T Consensus 229 A~G~p~---~i~--~d~vk~GavVIDVG 251 (303)
T 4b4u_A 229 AVGKAE---LIQ--KDWIKQGAVVVDAG 251 (303)
T ss_dssp CSCSTT---CBC--GGGSCTTCEEEECC
T ss_pred ccCCCC---ccc--cccccCCCEEEEec
Confidence 986543 232 35689999999985
No 300
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=96.37 E-value=0.0076 Score=57.44 Aligned_cols=71 Identities=23% Similarity=0.217 Sum_probs=44.2
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCcccHHHHH--HCC--ceec--CCCcCCHHhhhccC
Q 021218 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR--AAG--FTEE--NGTLGDIYETISGS 179 (316)
Q Consensus 108 l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~~s~~~A~--~~G--~~~~--~~t~~~~~e~i~~A 179 (316)
... +||+|||.|.||.++|..+... |. ++.+.+....+....+. .+. +... -....+. +.+++|
T Consensus 17 ~~~-~kV~ViGaG~vG~~~a~~l~~~------~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~-~~~~~a 88 (331)
T 4aj2_A 17 VPQ-NKITVVGVGAVGMACAISILMK------DLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDY-SVTANS 88 (331)
T ss_dssp CCS-SEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSG-GGGTTE
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHhC------CCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCH-HHhCCC
Confidence 445 8999999999999999999877 65 66666554322222221 111 1100 0012344 468999
Q ss_pred CEEEEcc
Q 021218 180 DLVLLLI 186 (316)
Q Consensus 180 DIViLav 186 (316)
|+||++.
T Consensus 89 DiVvi~a 95 (331)
T 4aj2_A 89 KLVIITA 95 (331)
T ss_dssp EEEEECC
T ss_pred CEEEEcc
Confidence 9999986
No 301
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.36 E-value=0.0046 Score=58.84 Aligned_cols=74 Identities=14% Similarity=0.133 Sum_probs=45.7
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCcccHHHHH--HCCcee-cC-CCcCCHHhhhccCC
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR--AAGFTE-EN-GTLGDIYETISGSD 180 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~~s~~~A~--~~G~~~-~~-~t~~~~~e~i~~AD 180 (316)
.-.+ +||+|||.|.+|.++|..|... ++ ++.+.+....+....+. .+.... .+ ....+..+.+++||
T Consensus 6 ~~~~-~kV~ViGaG~vG~~~a~~l~~~------~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aD 78 (326)
T 3vku_A 6 DKDH-QKVILVGDGAVGSSYAYAMVLQ------GIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDAD 78 (326)
T ss_dssp -CCC-CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCS
T ss_pred cCCC-CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCC
Confidence 3456 8999999999999999999988 76 66655543222221111 111100 00 00123457899999
Q ss_pred EEEEccc
Q 021218 181 LVLLLIS 187 (316)
Q Consensus 181 IViLavp 187 (316)
+||++..
T Consensus 79 iVvi~ag 85 (326)
T 3vku_A 79 LVVITAG 85 (326)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999874
No 302
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.33 E-value=0.0013 Score=59.00 Aligned_cols=81 Identities=12% Similarity=0.144 Sum_probs=53.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhc-cCCEEEEcccCch
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLLISDAA 190 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~-~ADIViLavp~~~ 190 (316)
++++|||+|++|.++++.+... . |++++...+.++..... ...|+... ...+++++++ +.|+|++|+|...
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~----~-g~~iVg~~D~dp~k~g~-~i~gv~V~--~~~dl~ell~~~ID~ViIA~Ps~~ 152 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFG----E-SFELRGFFDVDPEKVGR-PVRGGVIE--HVDLLPQRVPGRIEIALLTVPREA 152 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCC----S-SEEEEEEEESCTTTTTC-EETTEEEE--EGGGHHHHSTTTCCEEEECSCHHH
T ss_pred CEEEEECccHHHHHHHHhHhhc----C-CcEEEEEEeCCHHHHhh-hhcCCeee--cHHhHHHHHHcCCCEEEEeCCchh
Confidence 6899999999999999853222 2 67766555554432211 11233211 1457888886 5899999999988
Q ss_pred HHHHHHHHHh
Q 021218 191 QADNYEKIFS 200 (316)
Q Consensus 191 ~~~vi~ei~~ 200 (316)
..++.+.+..
T Consensus 153 ~~ei~~~l~~ 162 (211)
T 2dt5_A 153 AQKAADLLVA 162 (211)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777776644
No 303
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.32 E-value=0.0024 Score=59.17 Aligned_cols=99 Identities=18% Similarity=0.156 Sum_probs=66.4
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEE
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViL 184 (316)
.+++| +++.|+|.|-.+.+++..|.+. |. +|.+.+|..++..+.++..+............+.++++|+||-
T Consensus 121 ~~~~~-~~~lilGaGGaarai~~aL~~~------g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiN 193 (269)
T 3tum_A 121 FEPAG-KRALVIGCGGVGSAIAYALAEA------GIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVAN 193 (269)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEE
T ss_pred CCccc-CeEEEEecHHHHHHHHHHHHHh------CCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhccccccc
Confidence 45688 9999999999999999999988 86 6778887765555554432210000001123345678999999
Q ss_pred cccCchHHH----HHHHHHhcCCCCcEEEEe
Q 021218 185 LISDAAQAD----NYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 185 avp~~~~~~----vi~ei~~~mk~gaiLid~ 211 (316)
++|...... +-......++++.++.|+
T Consensus 194 aTp~Gm~~~~~~p~~~~~~~~l~~~~~v~D~ 224 (269)
T 3tum_A 194 ASPVGMGTRAELPLSAALLATLQPDTLVADV 224 (269)
T ss_dssp CSSTTCSTTCCCSSCHHHHHTCCTTSEEEEC
T ss_pred CCccccCCCCCCCCChHHHhccCCCcEEEEE
Confidence 999764322 223455678888888876
No 304
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.27 E-value=0.011 Score=51.37 Aligned_cols=76 Identities=18% Similarity=0.177 Sum_probs=52.3
Q ss_pred ccccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCc-e--ecCCCcCCHHhhhccCC
Q 021218 105 PDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF-T--EENGTLGDIYETISGSD 180 (316)
Q Consensus 105 ~~~l~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~-~--~~~~t~~~~~e~i~~AD 180 (316)
+..|+| |+|.|.|. |-+|.++++.|.+. |++|++..|+.++ .+.....++ . ..|-+ .+..+.+.+.|
T Consensus 16 ~~~l~~-~~ilVtGatG~iG~~l~~~L~~~------G~~V~~~~R~~~~-~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~D 86 (236)
T 3e8x_A 16 NLYFQG-MRVLVVGANGKVARYLLSELKNK------GHEPVAMVRNEEQ-GPELRERGASDIVVANLE-EDFSHAFASID 86 (236)
T ss_dssp -----C-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESSGGG-HHHHHHTTCSEEEECCTT-SCCGGGGTTCS
T ss_pred ccCcCC-CeEEEECCCChHHHHHHHHHHhC------CCeEEEEECChHH-HHHHHhCCCceEEEcccH-HHHHHHHcCCC
Confidence 578899 99999996 99999999999998 9998887776543 333334444 2 11211 45677888999
Q ss_pred EEEEcccCc
Q 021218 181 LVLLLISDA 189 (316)
Q Consensus 181 IViLavp~~ 189 (316)
+||.+....
T Consensus 87 ~vi~~ag~~ 95 (236)
T 3e8x_A 87 AVVFAAGSG 95 (236)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999988654
No 305
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=96.27 E-value=0.011 Score=54.96 Aligned_cols=92 Identities=11% Similarity=0.187 Sum_probs=61.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCH---Hhh-hccCCEEEEccc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI---YET-ISGSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~---~e~-i~~ADIViLavp 187 (316)
++|.|+|+|..|..+++.|.+. |+ |++. +++++..+ ..+.|+..-.+...+. .++ +++||.|+++++
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~------g~-v~vi-d~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGS------EV-FVLA-EDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLE 186 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGS------CE-EEEE-SCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCS
T ss_pred CCEEEECCcHHHHHHHHHHHhC------Cc-EEEE-eCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCC
Confidence 5899999999999999999888 87 5555 44455555 5566654222222233 334 788999999999
Q ss_pred CchHHHHHHHHHhcCCCC-cEEEEeC
Q 021218 188 DAAQADNYEKIFSCMKPN-SILGLSH 212 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~g-aiLid~a 212 (316)
+++..-.+-.....+.++ .++.-+.
T Consensus 187 ~d~~n~~~~~~ar~~~~~~~iiar~~ 212 (336)
T 1lnq_A 187 SDSETIHCILGIRKIDESVRIIAEAE 212 (336)
T ss_dssp SHHHHHHHHHHHHTTCTTSEEEEECS
T ss_pred ccHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 875554444555666666 4454443
No 306
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.21 E-value=0.0069 Score=59.89 Aligned_cols=74 Identities=15% Similarity=0.209 Sum_probs=50.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHH-HHHHCCceecCCCcCC---HHhh-hccCCEEEEcc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFA-EARAAGFTEENGTLGD---IYET-ISGSDLVLLLI 186 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~-~A~~~G~~~~~~t~~~---~~e~-i~~ADIViLav 186 (316)
|+|-|+|+|.+|..+|+.|... |++|++-+.+ ++..+ ...+.++..-.+...+ +.++ +++||+++.++
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~------~~~v~vId~d-~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t 76 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGE------NNDITIVDKD-GDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVT 76 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCST------TEEEEEEESC-HHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCEEEEECC-HHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEc
Confidence 8999999999999999999988 9887766654 44444 3445564321111223 3333 78999998888
Q ss_pred cCchHH
Q 021218 187 SDAAQA 192 (316)
Q Consensus 187 p~~~~~ 192 (316)
..+...
T Consensus 77 ~~De~N 82 (461)
T 4g65_A 77 NTDETN 82 (461)
T ss_dssp SCHHHH
T ss_pred CChHHH
Confidence 876543
No 307
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=96.17 E-value=0.013 Score=58.01 Aligned_cols=94 Identities=13% Similarity=0.147 Sum_probs=66.1
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc---EEEEEe----cC----Cccc---HH-----HHHHCCceecC
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI---VVKVGL----RK----GSRS---FA-----EARAAGFTEEN 166 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~---~Vivg~----r~----~~~s---~~-----~A~~~G~~~~~ 166 (316)
..+++ +++.|+|.|..|.+++..|.+. |. +|++.+ |+ .... .. .+...+..
T Consensus 182 ~~l~~-~rvlvlGAGgAg~aia~~L~~~------G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~--- 251 (439)
T 2dvm_A 182 KKISE-ITLALFGAGAAGFATLRILTEA------GVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGE--- 251 (439)
T ss_dssp CCTTT-CCEEEECCSHHHHHHHHHHHHT------TCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTT---
T ss_pred CCccC-CEEEEECccHHHHHHHHHHHHc------CCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccc---
Confidence 46788 9999999999999999999998 86 688888 65 2211 11 11111110
Q ss_pred CCcCCHHhhhccCCEEEEcccC--chHHHHHHHHHhcCCCCcEEEEeC
Q 021218 167 GTLGDIYETISGSDLVLLLISD--AAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 167 ~t~~~~~e~i~~ADIViLavp~--~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
....++.++++++|+||-++|. ....+ +....|+++.+|.|+.
T Consensus 252 ~~~~~L~e~l~~aDVlInaT~~~~G~~~~---e~v~~m~~~~iVfDLy 296 (439)
T 2dvm_A 252 NIEGGPQEALKDADVLISFTRPGPGVIKP---QWIEKMNEDAIVFPLA 296 (439)
T ss_dssp CCCSSHHHHHTTCSEEEECSCCCSSSSCH---HHHTTSCTTCEEEECC
T ss_pred cccccHHHHhccCCEEEEcCCCccCCCCh---HHHHhcCCCCEEEECC
Confidence 0134688999999999999998 54433 3455688888988884
No 308
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.16 E-value=0.012 Score=57.56 Aligned_cols=75 Identities=19% Similarity=0.162 Sum_probs=53.8
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCc---ccHHHHHHCCceecCCCcCCHHhhhcc-CC
Q 021218 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS---RSFAEARAAGFTEENGTLGDIYETISG-SD 180 (316)
Q Consensus 105 ~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~---~s~~~A~~~G~~~~~~t~~~~~e~i~~-AD 180 (316)
+.+++| ++|.|||.|..|.+.|+.|++. |++|.+.+++.. ...+..++.|+....+ .+.++.+.+ +|
T Consensus 4 ~~~~~~-k~v~viG~G~sG~s~A~~l~~~------G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g--~~~~~~~~~~~d 74 (451)
T 3lk7_A 4 ITTFEN-KKVLVLGLARSGEAAARLLAKL------GAIVTVNDGKPFDENPTAQSLLEEGIKVVCG--SHPLELLDEDFC 74 (451)
T ss_dssp CCTTTT-CEEEEECCTTTHHHHHHHHHHT------TCEEEEEESSCGGGCHHHHHHHHTTCEEEES--CCCGGGGGSCEE
T ss_pred hhhcCC-CEEEEEeeCHHHHHHHHHHHhC------CCEEEEEeCCcccCChHHHHHHhCCCEEEEC--CChHHhhcCCCC
Confidence 356789 9999999999999999999999 999888877532 2334455678754211 123445666 89
Q ss_pred EEEEc--ccC
Q 021218 181 LVLLL--ISD 188 (316)
Q Consensus 181 IViLa--vp~ 188 (316)
+||+. +|+
T Consensus 75 ~vv~spgi~~ 84 (451)
T 3lk7_A 75 YMIKNPGIPY 84 (451)
T ss_dssp EEEECTTSCT
T ss_pred EEEECCcCCC
Confidence 99985 454
No 309
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.08 E-value=0.0068 Score=55.99 Aligned_cols=80 Identities=16% Similarity=0.023 Sum_probs=52.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCchH
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~~~ 191 (316)
|+|++||+|+||..+++. + ++++....+ ++.. +.|+.. +.|.++++.++|+|+-|.+..+.
T Consensus 13 ~rV~i~G~GaIG~~v~~~-~--------~leLv~v~~--~k~g----elgv~a----~~d~d~lla~pD~VVe~A~~~av 73 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL-G--------NFEKIYAYD--RISK----DIPGVV----RLDEFQVPSDVSTVVECASPEAV 73 (253)
T ss_dssp CEEEEECCSHHHHHHHHH-S--------CCSEEEEEC--SSCC----CCSSSE----ECSSCCCCTTCCEEEECSCHHHH
T ss_pred ceEEEECcCHHHHHHHhc-C--------CcEEEEEEe--cccc----ccCcee----eCCHHHHhhCCCEEEECCCHHHH
Confidence 899999999999999987 2 454433332 2111 115432 45788888899999999987766
Q ss_pred HHHHHHHHhcCCCCcEEE-EeCC
Q 021218 192 ADNYEKIFSCMKPNSILG-LSHG 213 (316)
Q Consensus 192 ~~vi~ei~~~mk~gaiLi-d~aG 213 (316)
.+.+..+ |+.|.-++ .+.|
T Consensus 74 ~e~~~~i---L~aG~dvv~~S~g 93 (253)
T 1j5p_A 74 KEYSLQI---LKNPVNYIIISTS 93 (253)
T ss_dssp HHHHHHH---TTSSSEEEECCGG
T ss_pred HHHHHHH---HHCCCCEEEcChh
Confidence 5555554 55676554 3434
No 310
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=96.07 E-value=0.022 Score=56.96 Aligned_cols=73 Identities=18% Similarity=0.149 Sum_probs=43.3
Q ss_pred CEEEEEcccchH--HHHHHHHHhhhhhhcC-CcEEEEEecCCcccHHHH----H----HCCceecCCCcCCHHhhhccCC
Q 021218 112 NQIGVIGWGSQG--PAQAQNLRDSLAEAKS-DIVVKVGLRKGSRSFAEA----R----AAGFTEENGTLGDIYETISGSD 180 (316)
Q Consensus 112 kkIGIIG~G~mG--~AlA~~Lr~~~~~~g~-G~~Vivg~r~~~~s~~~A----~----~~G~~~~~~t~~~~~e~i~~AD 180 (316)
+||+|||.|.|| .++|..|... .+. +.+|.+.++..++ .+.+ . ..+....-....|..+++++||
T Consensus 4 ~KIaVIGAGsVg~g~ala~~La~~---~~l~~~eV~L~Di~~e~-l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD 79 (480)
T 1obb_A 4 VKIGIIGAGSAVFSLRLVSDLCKT---PGLSGSTVTLMDIDEER-LDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDAD 79 (480)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTC---GGGTTCEEEEECSCHHH-HHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCS
T ss_pred CEEEEECCCchHHHHHHHHHHHhc---CcCCCCEEEEEeCCHHH-HHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCC
Confidence 699999999984 6666677532 011 5577766665322 1111 1 1111100001357778899999
Q ss_pred EEEEcccC
Q 021218 181 LVLLLISD 188 (316)
Q Consensus 181 IViLavp~ 188 (316)
+||+++|.
T Consensus 80 ~VIiaagv 87 (480)
T 1obb_A 80 FVINTAMV 87 (480)
T ss_dssp EEEECCCT
T ss_pred EEEECCCc
Confidence 99999974
No 311
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.06 E-value=0.029 Score=52.48 Aligned_cols=71 Identities=17% Similarity=0.078 Sum_probs=50.5
Q ss_pred CCEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCc-ccHHHHHHCCceecCCCcCCHHhhh-ccCCEEEEc--
Q 021218 111 INQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLL-- 185 (316)
Q Consensus 111 ~kkIGIIG~G~mG~A-lA~~Lr~~~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~t~~~~~e~i-~~ADIViLa-- 185 (316)
||+|.|||.|-+|.+ +|+.|++. |++|.+.+++.. ...+..++.|+....+ .+.+++. .++|+||+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~------G~~V~~~D~~~~~~~~~~L~~~gi~v~~g--~~~~~l~~~~~d~vV~Spg 75 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEA------GFEVSGCDAKMYPPMSTQLEALGIDVYEG--FDAAQLDEFKADVYVIGNV 75 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHT------TCEEEEEESSCCTTHHHHHHHTTCEEEES--CCGGGGGSCCCSEEEECTT
T ss_pred CcEEEEEEECHHHHHHHHHHHHhC------CCEEEEEcCCCCcHHHHHHHhCCCEEECC--CCHHHcCCCCCCEEEECCC
Confidence 489999999999996 99999999 999888877643 2344556678754211 2444444 579999985
Q ss_pred ccCc
Q 021218 186 ISDA 189 (316)
Q Consensus 186 vp~~ 189 (316)
+|++
T Consensus 76 i~~~ 79 (326)
T 3eag_A 76 AKRG 79 (326)
T ss_dssp CCTT
T ss_pred cCCC
Confidence 5543
No 312
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=95.98 E-value=0.013 Score=55.89 Aligned_cols=93 Identities=10% Similarity=0.065 Sum_probs=55.4
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEe-cCCcccHHHHHHCCce--------ecCCCc--CCHHhhhccC
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGL-RKGSRSFAEARAAGFT--------EENGTL--GDIYETISGS 179 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~-r~~~~s~~~A~~~G~~--------~~~~t~--~~~~e~i~~A 179 (316)
++|||+| .|.+|..+.+.|.+. ..+++.... ++.+........++.. ..+-.+ .+.++ ++++
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~-----p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~v 78 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKH-----PYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDV 78 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTC-----SSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTC
T ss_pred cEEEEECcCCHHHHHHHHHHHhC-----CCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCC
Confidence 6899999 899999999988764 134554443 1211111122222210 000001 13333 4789
Q ss_pred CEEEEcccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 180 DIViLavp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
|+|++|+|.....++.....+ .|..|+|.++
T Consensus 79 DvVf~atp~~~s~~~a~~~~~---aG~~VId~s~ 109 (350)
T 2ep5_A 79 DVVLSALPNELAESIELELVK---NGKIVVSNAS 109 (350)
T ss_dssp SEEEECCCHHHHHHHHHHHHH---TTCEEEECSS
T ss_pred CEEEECCChHHHHHHHHHHHH---CCCEEEECCc
Confidence 999999998877777766543 5777888765
No 313
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=95.97 E-value=0.0078 Score=57.81 Aligned_cols=90 Identities=17% Similarity=0.171 Sum_probs=56.1
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCC------cEEEEEecCCc--ccHHHH----HH-CCceecCCCcCCHHhhh
Q 021218 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSD------IVVKVGLRKGS--RSFAEA----RA-AGFTEENGTLGDIYETI 176 (316)
Q Consensus 111 ~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G------~~Vivg~r~~~--~s~~~A----~~-~G~~~~~~t~~~~~e~i 176 (316)
|++|+|+| .|.+|..+.+.|.+. + .++....++.+ +..... .. ...... ..+. +.+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~------~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~---~~~~-~~~ 78 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGH------PAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVE---PTEA-AVL 78 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC------HHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCE---ECCH-HHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC------CCCCCccEEEEEEECCCcCCCchhhhcccccccceeeec---cCCH-HHh
Confidence 37999999 999999999999876 5 35444433211 111100 00 011110 1133 446
Q ss_pred ccCCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeCCc
Q 021218 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (316)
Q Consensus 177 ~~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~aGv 214 (316)
+++|+|++|+|.....++.+.. +.|..++|.++.
T Consensus 79 ~~~DvVf~alg~~~s~~~~~~~----~~G~~vIDlSa~ 112 (352)
T 2nqt_A 79 GGHDAVFLALPHGHSAVLAQQL----SPETLIIDCGAD 112 (352)
T ss_dssp TTCSEEEECCTTSCCHHHHHHS----CTTSEEEECSST
T ss_pred cCCCEEEECCCCcchHHHHHHH----hCCCEEEEECCC
Confidence 6999999999998777766654 468888887653
No 314
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.92 E-value=0.021 Score=50.80 Aligned_cols=70 Identities=13% Similarity=0.080 Sum_probs=49.8
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccCc
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~~ 189 (316)
||+|.|+|.|.+|..+++.|.+. |++|+...|+.. ..+.....++........+++ ++++|+||.+..+.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~~-~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQ------GWRIIGTSRNPD-QMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAPD 74 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGG------TCEEEEEESCGG-GHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCCB
T ss_pred cCcEEEECCcHHHHHHHHHHHHC------CCEEEEEEcChh-hhhhHhhCCCeEEEecccccc--cCCCCEEEECCCcc
Confidence 38999999999999999999998 998887777643 333334455432112233433 78999999988654
No 315
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=95.86 E-value=0.016 Score=55.04 Aligned_cols=98 Identities=14% Similarity=0.081 Sum_probs=55.0
Q ss_pred CEEEEEcccchHHHHHHHHHhh-hhhhcCCcEEEEEecCCcc---------c-HHHHHHCCceecCCCcCCHHhhhc--c
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDS-LAEAKSDIVVKVGLRKGSR---------S-FAEARAAGFTEENGTLGDIYETIS--G 178 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~-~~~~g~G~~Vivg~r~~~~---------s-~~~A~~~G~~~~~~t~~~~~e~i~--~ 178 (316)
.+|+|||+|.||..+++.|.+. .+..|.+++++...+++.. . .+.+.+.|... +..+ +.++++. +
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~-~~~~-d~~e~l~~~~ 82 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRIS-DRAF-SGPEDLMGEA 82 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSC-SSBC-CSGGGGTTSC
T ss_pred EEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCC-cccC-CHHHHhcCCC
Confidence 3799999999999999999863 0112224554433333221 1 12233334221 0012 5566664 5
Q ss_pred CCEEEEcccCchHHH-HHHHHHhcCCCCcEEEEe
Q 021218 179 SDLVLLLISDAAQAD-NYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 179 ADIViLavp~~~~~~-vi~ei~~~mk~gaiLid~ 211 (316)
.|+|+.|+|+....+ .++-+...++.|+.|+..
T Consensus 83 iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVta 116 (325)
T 3ing_A 83 ADLLVDCTPASRDGVREYSLYRMAFESGMNVVTA 116 (325)
T ss_dssp CSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEECCCCccccchHHHHHHHHHHCCCeEEEc
Confidence 899999999875422 233344455667776654
No 316
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=95.85 E-value=0.031 Score=55.39 Aligned_cols=91 Identities=16% Similarity=0.262 Sum_probs=56.0
Q ss_pred EEEEEcccchHHHHHHHHHhh---hh-hhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhc--cCCEEEEcc
Q 021218 113 QIGVIGWGSQGPAQAQNLRDS---LA-EAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLI 186 (316)
Q Consensus 113 kIGIIG~G~mG~AlA~~Lr~~---~~-~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~--~ADIViLav 186 (316)
+|||||+|.+|..+++.|.+. +. ..|.++++....+++....+.. ..+... ..+.+++++ +.|+|+.++
T Consensus 12 rIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~-~~~~~~----~~d~~ell~d~diDvVve~t 86 (444)
T 3mtj_A 12 HVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEAL-AGGLPL----TTNPFDVVDDPEIDIVVELI 86 (444)
T ss_dssp EEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHH-HTTCCE----ESCTHHHHTCTTCCEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhh-cccCcc----cCCHHHHhcCCCCCEEEEcC
Confidence 799999999999999888652 11 1234666554444433222111 122221 457888886 579999999
Q ss_pred cC-chHHHHHHHHHhcCCCCcEEEEe
Q 021218 187 SD-AAQADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 187 p~-~~~~~vi~ei~~~mk~gaiLid~ 211 (316)
|. ..+.+++.+. |+.|+.|+..
T Consensus 87 p~~~~h~~~~~~A---L~aGKhVvte 109 (444)
T 3mtj_A 87 GGLEPARELVMQA---IANGKHVVTA 109 (444)
T ss_dssp CSSTTHHHHHHHH---HHTTCEEEEC
T ss_pred CCchHHHHHHHHH---HHcCCEEEEC
Confidence 96 6666665543 3456655543
No 317
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=95.76 E-value=0.028 Score=52.89 Aligned_cols=68 Identities=12% Similarity=0.105 Sum_probs=43.6
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCC--cEEEEEecCCcccHHHH--HHCC-c--eecC-CCcCCHHhhhccCCEE
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRSFAEA--RAAG-F--TEEN-GTLGDIYETISGSDLV 182 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G--~~Vivg~r~~~~s~~~A--~~~G-~--~~~~-~t~~~~~e~i~~ADIV 182 (316)
+||+||| .|.+|.+++..|... | .+|.+.+.+.. ...+ .... . .... ....+..+++++||+|
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~------g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvV 80 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMN------PLVSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLI 80 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHC------TTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEE
Confidence 7999999 899999999999877 6 56666543332 2222 1111 1 1000 0012456889999999
Q ss_pred EEccc
Q 021218 183 LLLIS 187 (316)
Q Consensus 183 iLavp 187 (316)
|++..
T Consensus 81 i~~ag 85 (326)
T 1smk_A 81 IVPAG 85 (326)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 99985
No 318
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.74 E-value=0.049 Score=46.17 Aligned_cols=70 Identities=16% Similarity=0.193 Sum_probs=46.5
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCC-HHhhhccCCEEEEcccCc
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD-IYETISGSDLVLLLISDA 189 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~-~~e~i~~ADIViLavp~~ 189 (316)
|+|.|+| .|.+|.++++.|.+. |++|++..|+.++..+.. .++........+ ..+.+.++|+||.+....
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR------GHEVTAIVRNAGKITQTH--KDINILQKDIFDLTLSDLSDQNVVVDAYGIS 72 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCHHHHTTCSEEEECCCSS
T ss_pred CeEEEEcCCchhHHHHHHHHHhC------CCEEEEEEcCchhhhhcc--CCCeEEeccccChhhhhhcCCCEEEECCcCC
Confidence 5799999 699999999999998 999888877643322111 333211011111 116788999999988653
No 319
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.66 E-value=0.017 Score=55.64 Aligned_cols=90 Identities=12% Similarity=0.092 Sum_probs=57.0
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCc--ccHHHH---HHCCceecCCCcCCHHhhhccCCEEEE
Q 021218 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS--RSFAEA---RAAGFTEENGTLGDIYETISGSDLVLL 184 (316)
Q Consensus 111 ~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~--~s~~~A---~~~G~~~~~~t~~~~~e~i~~ADIViL 184 (316)
|.+||||| .|..|..+.+.|.+. ...++.......+ +..... .+.....+ ..+.++...++|+|++
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~h-----P~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~---~~~~~~~~~~~Dvvf~ 84 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNH-----PEAKITYLSSRTYAGKKLEEIFPSTLENSILS---EFDPEKVSKNCDVLFT 84 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHC-----TTEEEEEEECSTTTTSBHHHHCGGGCCCCBCB---CCCHHHHHHHCSEEEE
T ss_pred eeEEEEECCCCHHHHHHHHHHHcC-----CCcEEEEEeCcccccCChHHhChhhccCceEE---eCCHHHhhcCCCEEEE
Confidence 47999998 799999999999875 1235443332211 222211 00122211 1245555588999999
Q ss_pred cccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 185 avp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
|+|.....++.+++ .|..|+|.++
T Consensus 85 alp~~~s~~~~~~~-----~g~~VIDlSs 108 (351)
T 1vkn_A 85 ALPAGASYDLVREL-----KGVKIIDLGA 108 (351)
T ss_dssp CCSTTHHHHHHTTC-----CSCEEEESSS
T ss_pred CCCcHHHHHHHHHh-----CCCEEEECCh
Confidence 99988777666544 6889999876
No 320
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=95.64 E-value=0.044 Score=50.03 Aligned_cols=144 Identities=17% Similarity=0.192 Sum_probs=81.5
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhc-cCCEEEEcccCc
Q 021218 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLLISDA 189 (316)
Q Consensus 112 kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~-~ADIViLavp~~ 189 (316)
++|+|+|+ |.||..+++.+.+. .+++++...+++. ++++++. ++|+||=+++|.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~-----~~~elva~~d~~~-------------------dl~~~~~~~~DvvIDfT~p~ 56 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA-----DDLTLSAELDAGD-------------------PLSLLTDGNTEVVIDFTHPD 56 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC-----TTCEEEEEECTTC-------------------CTHHHHHTTCCEEEECSCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEccCC-------------------CHHHHhccCCcEEEEccChH
Confidence 58999995 99999999998753 1677665554421 3444443 799999888888
Q ss_pred hHHHHHHHHHhcCCCCc-EEEEeCCchhhhhhccccCCC--CCccEEEeccCCCchh--hHHHHhcCccccCCCceEEEe
Q 021218 190 AQADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSMGLDFP--KNIGVIAVCPKGMGPS--VRRLYVQGKEINGAGINSSFA 264 (316)
Q Consensus 190 ~~~~vi~ei~~~mk~ga-iLid~aGv~l~~l~~~~~~~~--~~i~vI~vhPn~pg~~--~r~lf~~G~e~~G~G~~~iia 264 (316)
...+++.....+ |. +|+-..|+..+..+....... +++.+ -..||+.--. +-.+.+.--... ..+ -++-
T Consensus 57 a~~~~~~~a~~~---g~~~VigTTG~~~e~~~~l~~aa~~~~~~~v-v~a~N~siGv~ll~~l~~~aa~~~-~di-eIiE 130 (245)
T 1p9l_A 57 VVMGNLEFLIDN---GIHAVVGTTGFTAERFQQVESWLVAKPNTSV-LIAPNFAIGAVLSMHFAKQAARFF-DSA-EVIE 130 (245)
T ss_dssp THHHHHHHHHHT---TCEEEECCCCCCHHHHHHHHHHHHTSTTCEE-EECSCCCHHHHHHHHHHHHHGGGC-SEE-EEEE
T ss_pred HHHHHHHHHHHc---CCCEEEcCCCCCHHHHHHHHHHHHhCCCCCE-EEECCccHHHHHHHHHHHHHHhhc-CCE-EEEE
Confidence 887777655443 33 444466776432221000111 13444 4567764322 111111110011 111 2233
Q ss_pred ecc----C-CCHHHHHHHHHHHHHcC
Q 021218 265 VHQ----D-VDGRATNVALGWSVALG 285 (316)
Q Consensus 265 p~~----d-~~~~a~e~a~~l~~alG 285 (316)
.|. | .++.|+.+++.+.+..+
T Consensus 131 ~HH~~K~DaPSGTA~~lae~i~~~~~ 156 (245)
T 1p9l_A 131 LHHPHKADAPSGTAARTAKLIAEARK 156 (245)
T ss_dssp EECTTCCSSSCHHHHHHHHHHHHHTT
T ss_pred CcccCCCCCCCHHHHHHHHHHHHhhc
Confidence 333 3 58899999999988766
No 321
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=95.63 E-value=0.0049 Score=57.02 Aligned_cols=161 Identities=14% Similarity=0.119 Sum_probs=87.4
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccH---HHHHHC-----CceecCCCcCCHHhhhccCCEE
Q 021218 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF---AEARAA-----GFTEENGTLGDIYETISGSDLV 182 (316)
Q Consensus 112 kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~---~~A~~~-----G~~~~~~t~~~~~e~i~~ADIV 182 (316)
++|+|+|+ |.||..+++.+... .+++++...+++.... +..... ++.. ..+++++++++|+|
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~-----~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~----~~dl~~~l~~~DvV 76 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALAL-----EGVQLGAALEREGSSLLGSDAGELAGAGKTGVTV----QSSLDAVKDDFDVF 76 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHS-----TTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCE----ESCSTTTTTSCSEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEecCchhhhhhhHHHHcCCCcCCcee----cCCHHHHhcCCCEE
Confidence 68999998 99999999987743 1666654444432110 001111 2221 34677888899999
Q ss_pred EEcccCchHHHHHHHHHhcCCCCc-EEEEeCCchhhhhhccccCCCCCccEEEeccCCCchhh--HHHHhcCccccCCCc
Q 021218 183 LLLISDAAQADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSV--RRLYVQGKEINGAGI 259 (316)
Q Consensus 183 iLavp~~~~~~vi~ei~~~mk~ga-iLid~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~~--r~lf~~G~e~~G~G~ 259 (316)
|-.++|....+++.....+ |. +|+-..|+.....+..... -+... +...||+.--.. -.+.++--...+.+.
T Consensus 77 IDft~p~~~~~~~~~a~~~---G~~vVigTtG~~~e~~~~L~~~-a~~~~-vv~a~N~siGvn~~~~l~~~aa~~~~~~~ 151 (273)
T 1dih_A 77 IDFTRPEGTLNHLAFCRQH---GKGMVIGTTGFDEAGKQAIRDA-AADIA-IVFAANFSVGVNVMLKLLEKAAKVMGDYT 151 (273)
T ss_dssp EECSCHHHHHHHHHHHHHT---TCEEEECCCCCCHHHHHHHHHH-TTTSC-EEECSCCCHHHHHHHHHHHHHHHHHTTTS
T ss_pred EEcCChHHHHHHHHHHHhC---CCCEEEECCCCCHHHHHHHHHh-cCCCC-EEEEecCcHHHHHHHHHHHHHHHhcCCCC
Confidence 9888888777776655443 44 3443557764332211111 23344 456777644321 011110000000111
Q ss_pred eEE-Eeecc-----CCCHHHHHHHHHHHHHcCC
Q 021218 260 NSS-FAVHQ-----DVDGRATNVALGWSVALGS 286 (316)
Q Consensus 260 ~~i-iap~~-----d~~~~a~e~a~~l~~alG~ 286 (316)
..- +--|. ..++.++.+++.+.+..|.
T Consensus 152 dieiiE~Hh~~K~DaPSGTA~~~ae~i~~~~~~ 184 (273)
T 1dih_A 152 DIEIIEAHHRHKVDAPSGTALAMGEAIAHALDK 184 (273)
T ss_dssp EEEEEEEECTTCCSSSCHHHHHHHHHHHHHTTC
T ss_pred CEEEEEeecCCCCCCCCHHHHHHHHHHHHhhCC
Confidence 221 22232 3689999999999988885
No 322
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=95.57 E-value=0.043 Score=52.18 Aligned_cols=90 Identities=12% Similarity=0.066 Sum_probs=53.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC--CcccHHHHHHCCc----------------eecCC------
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK--GSRSFAEARAAGF----------------TEENG------ 167 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~--~~~s~~~A~~~G~----------------~~~~~------ 167 (316)
.+|||+|+|.||..+++.|.+. .+++++...+. +........++.- .. ++
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~-----~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v-~g~~i~v~ 77 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNS-----GKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVI-NGNPITIF 77 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEE-TTEEEEEE
T ss_pred eEEEEEccCHHHHHHHHHHHcC-----CCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEE-CCeEEEEE
Confidence 5999999999999999998764 14676554442 3322222222110 00 00
Q ss_pred CcCCHHhh-h--ccCCEEEEcccCchHHHHHHHHHhcCCCCcEEEE
Q 021218 168 TLGDIYET-I--SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGL 210 (316)
Q Consensus 168 t~~~~~e~-i--~~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid 210 (316)
...+++++ . .++|+|+.|+|.....+.... +++.|+.++|
T Consensus 78 ~~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~---~l~aGak~V~ 120 (335)
T 1u8f_O 78 QERDPSKIKWGDAGAEYVVESTGVFTTMEKAGA---HLQGGAKRVI 120 (335)
T ss_dssp CCSSGGGCCTTTTTCCEEEECSSSCCSHHHHGG---GGGGTCSEEE
T ss_pred ecCCHHHCccccCCCCEEEECCCchhhHHHHHH---HHhCCCeEEE
Confidence 01244444 1 579999999999888776554 4556744443
No 323
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=95.55 E-value=0.078 Score=50.69 Aligned_cols=72 Identities=14% Similarity=0.144 Sum_probs=52.9
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecCC----cccHH----HHHHCCceecCCCcCCHHhhh
Q 021218 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAGFTEENGTLGDIYETI 176 (316)
Q Consensus 107 ~l~G~kkIGIIG~G--~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~----~~s~~----~A~~~G~~~~~~t~~~~~e~i 176 (316)
.|+| .+|++||-| +++.|++..+... |+++.+...+. +.-.+ .+++.|.... ...+++|++
T Consensus 152 ~l~g-l~ia~vGD~~~~va~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~--~~~d~~eav 222 (333)
T 1duv_G 152 AFNE-MTLVYAGDARNNMGNSMLEAAALT------GLDLRLVAPQACWPEAALVTECRALAQQNGGNIT--LTEDVAKGV 222 (333)
T ss_dssp CGGG-CEEEEESCTTSHHHHHHHHHHHHH------CCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEE--EESCHHHHH
T ss_pred CCCC-cEEEEECCCccchHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEE--EEECHHHHh
Confidence 5788 999999986 9999999999999 99987775532 11222 3336773211 146899999
Q ss_pred ccCCEEEEccc
Q 021218 177 SGSDLVLLLIS 187 (316)
Q Consensus 177 ~~ADIViLavp 187 (316)
+++|+|..-+=
T Consensus 223 ~~aDvvytd~w 233 (333)
T 1duv_G 223 EGADFIYTDVW 233 (333)
T ss_dssp TTCSEEEECCS
T ss_pred CCCCEEEeCCc
Confidence 99999998554
No 324
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=95.53 E-value=0.1 Score=49.47 Aligned_cols=73 Identities=15% Similarity=0.140 Sum_probs=53.3
Q ss_pred cccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCC----cccHH----HHHHCCceecCCCcCCHHhhh
Q 021218 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAGFTEENGTLGDIYETI 176 (316)
Q Consensus 106 ~~l~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~----~~s~~----~A~~~G~~~~~~t~~~~~e~i 176 (316)
..|+| .+|++||- +++..|++..+... |+++.+...+. +.-.+ .+++.|.... ...+++|++
T Consensus 151 g~l~g-l~va~vGD~~rva~Sl~~~~~~~------g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~--~~~d~~eav 221 (315)
T 1pvv_A 151 GTIKG-VKVVYVGDGNNVAHSLMIAGTKL------GADVVVATPEGYEPDEKVIKWAEQNAAESGGSFE--LLHDPVKAV 221 (315)
T ss_dssp SCCTT-CEEEEESCCCHHHHHHHHHHHHT------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEE--EESCHHHHT
T ss_pred CCcCC-cEEEEECCCcchHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEE--EEeCHHHHh
Confidence 56889 99999996 79999999999998 99988776543 11222 2335663211 146899999
Q ss_pred ccCCEEEEccc
Q 021218 177 SGSDLVLLLIS 187 (316)
Q Consensus 177 ~~ADIViLavp 187 (316)
+++|+|..-+=
T Consensus 222 ~~aDvvy~~~w 232 (315)
T 1pvv_A 222 KDADVIYTDVW 232 (315)
T ss_dssp TTCSEEEECCC
T ss_pred CCCCEEEEcce
Confidence 99999998553
No 325
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=95.52 E-value=0.012 Score=55.30 Aligned_cols=69 Identities=16% Similarity=0.147 Sum_probs=42.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCcccHHHHHHCC----ceecCC--CcCCHHhhhccCCEEE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAG----FTEENG--TLGDIYETISGSDLVL 183 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~~s~~~A~~~G----~~~~~~--t~~~~~e~i~~ADIVi 183 (316)
|||+|||.|.+|.++|..|... +. ++.+.+.......-.|.+.. +..... ...+..+.+++||+|+
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~------~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVv 74 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN------LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIV 74 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------SCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEE
Confidence 7899999999999999999887 64 55555544322222222110 000000 0122346789999999
Q ss_pred Ecc
Q 021218 184 LLI 186 (316)
Q Consensus 184 Lav 186 (316)
++.
T Consensus 75 itA 77 (294)
T 2x0j_A 75 VTA 77 (294)
T ss_dssp ECC
T ss_pred Eec
Confidence 987
No 326
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=95.50 E-value=0.081 Score=50.63 Aligned_cols=72 Identities=17% Similarity=0.107 Sum_probs=52.8
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecCC----cccHH----HHHHCCceecCCCcCCHHhhh
Q 021218 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAGFTEENGTLGDIYETI 176 (316)
Q Consensus 107 ~l~G~kkIGIIG~G--~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~----~~s~~----~A~~~G~~~~~~t~~~~~e~i 176 (316)
.|+| .+|++||-| +++.|++.++... |+++.+...+. +.-.+ .+++.|.... ...+++|++
T Consensus 152 ~l~g-l~va~vGD~~~~va~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~--~~~d~~eav 222 (335)
T 1dxh_A 152 PLHD-ISYAYLGDARNNMGNSLLLIGAKL------GMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLT--LTEDPKEAV 222 (335)
T ss_dssp CGGG-CEEEEESCCSSHHHHHHHHHHHHT------TCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEE--EESCHHHHT
T ss_pred CcCC-eEEEEecCCccchHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEE--EEeCHHHHh
Confidence 6888 999999986 9999999999999 99987776542 11222 2335663211 146899999
Q ss_pred ccCCEEEEccc
Q 021218 177 SGSDLVLLLIS 187 (316)
Q Consensus 177 ~~ADIViLavp 187 (316)
+++|+|..-+=
T Consensus 223 ~~aDvvytd~w 233 (335)
T 1dxh_A 223 KGVDFVHTDVW 233 (335)
T ss_dssp TTCSEEEECCC
T ss_pred CCCCEEEeCCc
Confidence 99999998554
No 327
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=95.45 E-value=0.039 Score=54.21 Aligned_cols=79 Identities=19% Similarity=0.183 Sum_probs=50.9
Q ss_pred CccccccccccCCCCEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhh
Q 021218 98 RDLFNLLPDAFNGINQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI 176 (316)
Q Consensus 98 ~w~F~~~~~~l~G~kkIGIIG~G~mG~A-lA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i 176 (316)
+|++.....++..+++|.|||.|-.|.+ +|+.|.+. |++|.+.+...+...+..++.|+....+. +. +.+
T Consensus 5 ~~~~~~~~~~~~~~~~i~viG~G~sG~s~~A~~l~~~------G~~V~~~D~~~~~~~~~l~~~gi~~~~g~--~~-~~~ 75 (475)
T 1p3d_A 5 HEEIRKIIPEMRRVQQIHFIGIGGAGMSGIAEILLNE------GYQISGSDIADGVVTQRLAQAGAKIYIGH--AE-EHI 75 (475)
T ss_dssp ------CCCCCTTCCEEEEETTTSTTHHHHHHHHHHH------TCEEEEEESCCSHHHHHHHHTTCEEEESC--CG-GGG
T ss_pred HHhhcccCcccccCCEEEEEeecHHHHHHHHHHHHhC------CCEEEEECCCCCHHHHHHHhCCCEEECCC--CH-HHc
Confidence 3443322233445589999999999997 99999998 99988777665443344556787543221 23 356
Q ss_pred ccCCEEEEc
Q 021218 177 SGSDLVLLL 185 (316)
Q Consensus 177 ~~ADIViLa 185 (316)
+.+|+||+.
T Consensus 76 ~~a~~vv~s 84 (475)
T 1p3d_A 76 EGASVVVVS 84 (475)
T ss_dssp TTCSEEEEC
T ss_pred CCCCEEEEC
Confidence 789999884
No 328
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.30 E-value=0.14 Score=48.19 Aligned_cols=93 Identities=19% Similarity=0.224 Sum_probs=63.0
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCCceec-CCCc--CCHHhhhc-----cC
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~t~--~~~~e~i~-----~A 179 (316)
+| .+|.|+|.|.+|...++.++.. |. +|+ +.+.+++..+.+++.|.... +... .+..+.+. ..
T Consensus 191 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi-~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~ 262 (373)
T 1p0f_A 191 PG-STCAVFGLGGVGFSAIVGCKAA------GASRII-GVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGV 262 (373)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCSEEE-EECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEE-EECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCC
Confidence 57 8999999999999999999998 87 554 44445566788888886320 1000 13333332 58
Q ss_pred CEEEEcccCchHHHHHHHHHhcCCCC-cEEEEeC
Q 021218 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLSH 212 (316)
Q Consensus 180 DIViLavp~~~~~~vi~ei~~~mk~g-aiLid~a 212 (316)
|+|+-++... +.+++.++.++++ -.++.++
T Consensus 263 Dvvid~~g~~---~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 263 DYAVECAGRI---ETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEECC
T ss_pred CEEEECCCCH---HHHHHHHHHHhcCCCEEEEEc
Confidence 9999998753 3456666778887 6655443
No 329
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=95.23 E-value=0.055 Score=51.60 Aligned_cols=93 Identities=13% Similarity=0.111 Sum_probs=54.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC--CcccHHHHH----HCC-----cee--cCC-----------
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK--GSRSFAEAR----AAG-----FTE--ENG----------- 167 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~--~~~s~~~A~----~~G-----~~~--~~~----------- 167 (316)
.+|||+|+|.||..+++.|.+. .+++++...+. +.+...... .+| ... +++
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~-----p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v 78 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQS-----EDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTV 78 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----SSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEE
T ss_pred eEEEEECcCHHHHHHHHHHhCC-----CCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEE
Confidence 4899999999999999998764 14565544442 222111221 111 110 000
Q ss_pred -CcCCHHhh---hccCCEEEEcccCchHHHHHHHHHhcCCCCc--EEEEeC
Q 021218 168 -TLGDIYET---ISGSDLVLLLISDAAQADNYEKIFSCMKPNS--ILGLSH 212 (316)
Q Consensus 168 -t~~~~~e~---i~~ADIViLavp~~~~~~vi~ei~~~mk~ga--iLid~a 212 (316)
...+++++ -.++|+|+.|+|.....+.....++ .|+ +|++..
T Consensus 79 ~~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~---aGak~VVIs~p 126 (337)
T 3e5r_O 79 FGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLK---GGAKKVVISAP 126 (337)
T ss_dssp ECCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHH---TTCSEEEESSC
T ss_pred EecCChHHccccccCCCEEEECCCchhhHHHHHHHHH---cCCCEEEEecC
Confidence 01144443 1479999999999988877765543 455 666654
No 330
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.22 E-value=0.0076 Score=52.86 Aligned_cols=93 Identities=12% Similarity=0.164 Sum_probs=55.5
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCC-cEEEEEecCCcccHHHHHHCCceecCCCcCC---HHhhhccCCEEEEcc
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLI 186 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G-~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~---~~e~i~~ADIViLav 186 (316)
|+|.|.| .|-+|.++++.|.+. | ++|++..|+.++..+ ....++......+.+ ++++++++|+||.+.
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~------G~~~V~~~~R~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a 96 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADK------QTIKQTLFARQPAKIHK-PYPTNSQIIMGDVLNHAALKQAMQGQDIVYANL 96 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC------TTEEEEEEESSGGGSCS-SCCTTEEEEECCTTCHHHHHHHHTTCSEEEEEC
T ss_pred cEEEEEeCCcHHHHHHHHHHHhC------CCceEEEEEcChhhhcc-cccCCcEEEEecCCCHHHHHHHhcCCCEEEEcC
Confidence 7899999 799999999999988 8 788877776432111 011122110111223 456788999999887
Q ss_pred cCchHHHHHHHHHhcC---CCCcEEEEe
Q 021218 187 SDAAQADNYEKIFSCM---KPNSILGLS 211 (316)
Q Consensus 187 p~~~~~~vi~ei~~~m---k~gaiLid~ 211 (316)
.........+.+++.| +.+.+|..+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~iV~iS 124 (236)
T 3qvo_A 97 TGEDLDIQANSVIAAMKACDVKRLIFVL 124 (236)
T ss_dssp CSTTHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCchhHHHHHHHHHHHHcCCCEEEEEe
Confidence 7654433333344433 223455444
No 331
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=95.19 E-value=0.08 Score=52.74 Aligned_cols=77 Identities=21% Similarity=0.099 Sum_probs=43.1
Q ss_pred CEEEEEcccch-HHHHHHHHHhhhhhhcC-CcEEEEEecCCcccH---HHHH----HCCceecCCCcCCHHhhhccCCEE
Q 021218 112 NQIGVIGWGSQ-GPAQAQNLRDSLAEAKS-DIVVKVGLRKGSRSF---AEAR----AAGFTEENGTLGDIYETISGSDLV 182 (316)
Q Consensus 112 kkIGIIG~G~m-G~AlA~~Lr~~~~~~g~-G~~Vivg~r~~~~s~---~~A~----~~G~~~~~~t~~~~~e~i~~ADIV 182 (316)
+||+|||.|+. |.++|..|.... .+. +.+|.+.++..++.. +... ..+....-....|..+++++||+|
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~--~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~V 106 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHL--EEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFV 106 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTT--TTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHhCC--CCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEE
Confidence 59999999998 555665554420 011 335666665432211 1111 111110000135778899999999
Q ss_pred EEcccCch
Q 021218 183 LLLISDAA 190 (316)
Q Consensus 183 iLavp~~~ 190 (316)
|+++|...
T Consensus 107 Viaag~~~ 114 (472)
T 1u8x_X 107 MAHIRVGK 114 (472)
T ss_dssp EECCCTTH
T ss_pred EEcCCCcc
Confidence 99998843
No 332
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.17 E-value=0.15 Score=47.99 Aligned_cols=92 Identities=18% Similarity=0.239 Sum_probs=62.5
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCCceec-CCCc--CCHHhhhc-----cC
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~t~--~~~~e~i~-----~A 179 (316)
+| ++|.|+|.|.+|...++.++.. |. +|+. .+.+++..+.+++.|.... +... .+..+.+. ..
T Consensus 192 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~~Vi~-~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~ 263 (374)
T 1cdo_A 192 PG-STCAVFGLGAVGLAAVMGCHSA------GAKRIIA-VDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGV 263 (374)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEE-ECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEE-EcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCC
Confidence 57 8999999999999999999998 88 5554 4445566778888886320 1000 13444333 48
Q ss_pred CEEEEcccCchHHHHHHHHHhcCCCC-cEEEEe
Q 021218 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLS 211 (316)
Q Consensus 180 DIViLavp~~~~~~vi~ei~~~mk~g-aiLid~ 211 (316)
|+|+-++... +.++..++.++++ -.++.+
T Consensus 264 D~vid~~g~~---~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 264 DFSLECVGNV---GVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCCH---HHHHHHHHHhhcCCcEEEEE
Confidence 9999998753 2456666778887 655544
No 333
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=95.16 E-value=0.1 Score=51.65 Aligned_cols=75 Identities=20% Similarity=0.094 Sum_probs=44.4
Q ss_pred CEEEEEcccch-HHHHHHHHHh--hhhhhcC-CcEEEEEecCC--cccHH---HHH----HCCceecCCCcCCHHhhhcc
Q 021218 112 NQIGVIGWGSQ-GPAQAQNLRD--SLAEAKS-DIVVKVGLRKG--SRSFA---EAR----AAGFTEENGTLGDIYETISG 178 (316)
Q Consensus 112 kkIGIIG~G~m-G~AlA~~Lr~--~~~~~g~-G~~Vivg~r~~--~~s~~---~A~----~~G~~~~~~t~~~~~e~i~~ 178 (316)
+||+|||.|+. |.+++..|.. . +. +.+|.+.++.. ++... .+. ..+....-....|..+++++
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~----~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~g 83 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYH----ELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDG 83 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTT----TCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC----CCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCC
Confidence 69999999998 7777766665 3 11 23566665543 21111 111 12211000013577889999
Q ss_pred CCEEEEcccCch
Q 021218 179 SDLVLLLISDAA 190 (316)
Q Consensus 179 ADIViLavp~~~ 190 (316)
||+|+++++...
T Consensus 84 AD~VVitagv~~ 95 (450)
T 1s6y_A 84 ADFVTTQFRVGG 95 (450)
T ss_dssp CSEEEECCCTTH
T ss_pred CCEEEEcCCCCC
Confidence 999999999643
No 334
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.16 E-value=0.14 Score=48.12 Aligned_cols=92 Identities=18% Similarity=0.245 Sum_probs=62.4
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCCceec-CCCc--CCHHhhhc-----cC
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~t~--~~~~e~i~-----~A 179 (316)
+| .+|.|+|.|.+|...++.++.. |. +|+. .+.+++..+.+++.|.... +... .+..+.+. ..
T Consensus 195 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~-~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 195 PG-STCAVFGLGCVGLSAIIGCKIA------GASRIIA-IDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGV 266 (376)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEE-ECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEE-EcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCc
Confidence 57 8999999999999999999998 88 5554 4445566788888886320 1000 13333332 58
Q ss_pred CEEEEcccCchHHHHHHHHHhcCCCC-cEEEEe
Q 021218 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLS 211 (316)
Q Consensus 180 DIViLavp~~~~~~vi~ei~~~mk~g-aiLid~ 211 (316)
|+|+-++... +.+++.++.++++ -.++.+
T Consensus 267 Dvvid~~G~~---~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 267 DYSLDCAGTA---QTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp SEEEESSCCH---HHHHHHHHTBCTTTCEEEEC
T ss_pred cEEEECCCCH---HHHHHHHHHhhcCCCEEEEE
Confidence 9999998753 3456666778887 665544
No 335
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=95.14 E-value=0.078 Score=50.91 Aligned_cols=88 Identities=16% Similarity=0.150 Sum_probs=55.7
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCc--ccHHHH-------------HHCCceecCCCcCCHHhh
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS--RSFAEA-------------RAAGFTEENGTLGDIYET 175 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~--~s~~~A-------------~~~G~~~~~~t~~~~~e~ 175 (316)
.+||||| .|..|..+.+.|.+. ...++.....+.+ +..... .+.-+.+ .+. +.
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~h-----P~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~-----~~~-~~ 76 (359)
T 4dpk_A 8 LKAAILGATGLVGIEYVRMLSNH-----PYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKP-----TDP-KL 76 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTC-----SSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEE-----CCG-GG
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-----CCceEEEEECchhcCCChhHhcccccccccccccccceEEe-----CCH-HH
Confidence 5899999 799999999977654 1234433322222 222211 1111111 122 34
Q ss_pred hccCCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 176 ISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 176 i~~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
++++|+||+|+|.....++..++. +.|..++|.++
T Consensus 77 ~~~vDvvf~a~p~~~s~~~a~~~~---~~G~~vIDlSa 111 (359)
T 4dpk_A 77 MDDVDIIFSPLPQGAAGPVEEQFA---KEGFPVISNSP 111 (359)
T ss_dssp CTTCCEEEECCCTTTHHHHHHHHH---HTTCEEEECSS
T ss_pred hcCCCEEEECCChHHHHHHHHHHH---HCCCEEEEcCC
Confidence 589999999999998888777664 35888998765
No 336
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=95.14 E-value=0.078 Score=50.91 Aligned_cols=88 Identities=16% Similarity=0.150 Sum_probs=55.7
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCc--ccHHHH-------------HHCCceecCCCcCCHHhh
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS--RSFAEA-------------RAAGFTEENGTLGDIYET 175 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~--~s~~~A-------------~~~G~~~~~~t~~~~~e~ 175 (316)
.+||||| .|..|..+.+.|.+. ...++.....+.+ +..... .+.-+.+ .+. +.
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~h-----P~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~-----~~~-~~ 76 (359)
T 4dpl_A 8 LKAAILGATGLVGIEYVRMLSNH-----PYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKP-----TDP-KL 76 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTC-----SSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEE-----CCG-GG
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-----CCceEEEEECchhcCCChhHhcccccccccccccccceEEe-----CCH-HH
Confidence 5899999 799999999977654 1234433322222 222211 1111111 122 34
Q ss_pred hccCCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 176 ISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 176 i~~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
++++|+||+|+|.....++..++. +.|..++|.++
T Consensus 77 ~~~vDvvf~a~p~~~s~~~a~~~~---~~G~~vIDlSa 111 (359)
T 4dpl_A 77 MDDVDIIFSPLPQGAAGPVEEQFA---KEGFPVISNSP 111 (359)
T ss_dssp CTTCCEEEECCCTTTHHHHHHHHH---HTTCEEEECSS
T ss_pred hcCCCEEEECCChHHHHHHHHHHH---HCCCEEEEcCC
Confidence 589999999999998888777664 35888998765
No 337
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=95.11 E-value=0.05 Score=53.98 Aligned_cols=69 Identities=17% Similarity=0.165 Sum_probs=51.8
Q ss_pred CCEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEc--cc
Q 021218 111 INQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL--IS 187 (316)
Q Consensus 111 ~kkIGIIG~G~mG~A-lA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLa--vp 187 (316)
+++|.|||.|-.|.+ +|+.|++. |++|.+.+.+.+...+..++.|+... .....+.+.++|+||+. +|
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~------G~~V~~~D~~~~~~~~~l~~~gi~~~---~g~~~~~~~~~d~vV~Spgi~ 92 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANE------GYQISGSDLAPNSVTQHLTALGAQIY---FHHRPENVLDASVVVVSTAIS 92 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHT------TCEEEEECSSCCHHHHHHHHTTCEEE---SSCCGGGGTTCSEEEECTTSC
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHCCCEEE---CCCCHHHcCCCCEEEECCCCC
Confidence 389999999999996 89999999 99988777665554555667787643 22233457889999985 55
Q ss_pred C
Q 021218 188 D 188 (316)
Q Consensus 188 ~ 188 (316)
+
T Consensus 93 ~ 93 (494)
T 4hv4_A 93 A 93 (494)
T ss_dssp T
T ss_pred C
Confidence 5
No 338
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.10 E-value=0.049 Score=46.79 Aligned_cols=72 Identities=15% Similarity=0.213 Sum_probs=47.1
Q ss_pred CEEEEEc-ccchHHHHHHHHH-hhhhhhcCCcEEEEEecCCc-ccHHHH-HHCCceecCCCcCC---HHhhhccCCEEEE
Q 021218 112 NQIGVIG-WGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGS-RSFAEA-RAAGFTEENGTLGD---IYETISGSDLVLL 184 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr-~~~~~~g~G~~Vivg~r~~~-~s~~~A-~~~G~~~~~~t~~~---~~e~i~~ADIViL 184 (316)
++|.|+| .|.+|.++++.|. +. |++|++..|+.+ +..+.+ ...++........+ +.++++++|+||.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~ 79 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYT------DMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFV 79 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHC------CCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcC------CceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEE
Confidence 5699999 6999999999999 77 998887777643 222221 11222110111223 4567889999999
Q ss_pred cccCc
Q 021218 185 LISDA 189 (316)
Q Consensus 185 avp~~ 189 (316)
+....
T Consensus 80 ~ag~~ 84 (221)
T 3r6d_A 80 GAMES 84 (221)
T ss_dssp SCCCC
T ss_pred cCCCC
Confidence 98764
No 339
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=95.09 E-value=0.021 Score=56.10 Aligned_cols=37 Identities=19% Similarity=0.261 Sum_probs=32.9
Q ss_pred cc-cCCCCEEEEEcccchHHHHHHHHHh-hhhhhcCCcEEEEEecC
Q 021218 106 DA-FNGINQIGVIGWGSQGPAQAQNLRD-SLAEAKSDIVVKVGLRK 149 (316)
Q Consensus 106 ~~-l~G~kkIGIIG~G~mG~AlA~~Lr~-~~~~~g~G~~Vivg~r~ 149 (316)
.+ |+| ++++|+|+|++|..+|+.+++ + |++|+...+.
T Consensus 207 ~~~l~g-ktvgI~G~G~VG~~vA~~l~~~~------G~kVv~~sD~ 245 (419)
T 1gtm_A 207 WDTLKG-KTIAIQGYGNAGYYLAKIMSEDF------GMKVVAVSDS 245 (419)
T ss_dssp CSCSTT-CEEEEECCSHHHHHHHHHHHHTT------CCEEEEEECS
T ss_pred CcccCC-CEEEEEcCCHHHHHHHHHHHHhc------CCEEEEEeCC
Confidence 45 999 999999999999999999999 8 9998766554
No 340
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.07 E-value=0.15 Score=47.95 Aligned_cols=93 Identities=22% Similarity=0.303 Sum_probs=62.3
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCCceec-CCCc--CCHHhhhc-----cC
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~t~--~~~~e~i~-----~A 179 (316)
+| ++|.|+|.|.+|...++.++.. |. +|+. .+.+++..+.+++.|.... +... .+..+.+. ..
T Consensus 191 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~~Vi~-~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~ 262 (374)
T 2jhf_A 191 QG-STCAVFGLGGVGLSVIMGCKAA------GAARIIG-VDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGV 262 (374)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEE-ECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEE-EcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCC
Confidence 57 8999999999999999999998 88 5554 4444566778888885310 1000 13333332 48
Q ss_pred CEEEEcccCchHHHHHHHHHhcCCCC-cEEEEeC
Q 021218 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLSH 212 (316)
Q Consensus 180 DIViLavp~~~~~~vi~ei~~~mk~g-aiLid~a 212 (316)
|+|+-++... +.+++.++.++++ -.++.++
T Consensus 263 D~vid~~g~~---~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 263 DFSFEVIGRL---DTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp SEEEECSCCH---HHHHHHHHHBCTTTCEEEECS
T ss_pred cEEEECCCCH---HHHHHHHHHhhcCCcEEEEec
Confidence 9999998753 2455556677877 6655443
No 341
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=95.04 E-value=0.058 Score=51.02 Aligned_cols=94 Identities=12% Similarity=0.047 Sum_probs=53.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhh--hhcCCcEEE-EEecCCcccHH------HHH---HCCceecCCCcC---CHHhhh
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLA--EAKSDIVVK-VGLRKGSRSFA------EAR---AAGFTEENGTLG---DIYETI 176 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~--~~g~G~~Vi-vg~r~~~~s~~------~A~---~~G~~~~~~t~~---~~~e~i 176 (316)
.+|||||+|.||..+++.+.+.-+ ..|.+++++ +.+++..+..+ .+. ..++.. ... +.++++
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~ll 83 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDS---LEYESISASEAL 83 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGG---CCSEECCHHHHH
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCccc---ccCCCCCHHHHh
Confidence 579999999999999999877511 011124543 33333221111 011 122210 022 677776
Q ss_pred -ccCCEEEEcccCc----hHHHHHHHHHhcCCCCcEEEEe
Q 021218 177 -SGSDLVLLLISDA----AQADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 177 -~~ADIViLavp~~----~~~~vi~ei~~~mk~gaiLid~ 211 (316)
.+.|+|+.|+|.. ...+++.+. |+.|+.|+..
T Consensus 84 ~~~iDvVv~~t~~~~~~~~~~~~~~~A---L~aGkhVvta 120 (331)
T 3c8m_A 84 ARDFDIVVDATPASADGKKELAFYKET---FENGKDVVTA 120 (331)
T ss_dssp HSSCSEEEECSCCCSSSHHHHHHHHHH---HHTTCEEEEC
T ss_pred CCCCCEEEECCCCCCccchHHHHHHHH---HHCCCeEEec
Confidence 4689999999996 333444433 4457766653
No 342
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=94.97 E-value=0.019 Score=55.09 Aligned_cols=88 Identities=14% Similarity=0.060 Sum_probs=49.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC-CceecCCCcCCHHhhhc-------------
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETIS------------- 177 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~-G~~~~~~t~~~~~e~i~------------- 177 (316)
.+|||||+|.||..+++.+++. . .|.+++++...+..... .+.++ |+.. +.+.+++++
T Consensus 5 i~vgIiG~G~VG~~~~~~l~~~-~-~g~~~~vvaV~d~~~~~--~~~~~~gi~~----~~~~~e~l~~~~~~~~did~v~ 76 (358)
T 1ebf_A 5 VNVAVIGAGVVGSAFLDQLLAM-K-STITYNLVLLAEAERSL--ISKDFSPLNV----GSDWKAALAASTTKTLPLDDLI 76 (358)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-C-CSSEEEEEEEECSSBEE--ECSSCSCCSC----TTCHHHHHHTCCCBCCCHHHHH
T ss_pred EEEEEEecCHHHHHHHHHHHhc-C-CCCCEEEEEEEECChhh--hccccCCCCc----cccHHHHHhcccCCCCCHHHHH
Confidence 5899999999999999999875 0 01124443322221111 11111 3211 123333332
Q ss_pred -------cCCEEEEcccCchHHHHHHHHHhcCCCCcEEEE
Q 021218 178 -------GSDLVLLLISDAAQADNYEKIFSCMKPNSILGL 210 (316)
Q Consensus 178 -------~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid 210 (316)
..|+|+.|+|...+.+.+. ..|+.|+.|+.
T Consensus 77 e~~~~~~~~DvVV~~t~~~~~a~~~~---~AL~aGkhVVt 113 (358)
T 1ebf_A 77 AHLKTSPKPVILVDNTSSAYIAGFYT---KFVENGISIAT 113 (358)
T ss_dssp HHHTTCSSCEEEEECSCCHHHHTTHH---HHHHTTCEEEC
T ss_pred HHhhhccCCcEEEEcCCChHHHHHHH---HHHHCCCeEEe
Confidence 2389999999876555443 34566877665
No 343
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=94.97 E-value=0.06 Score=48.74 Aligned_cols=88 Identities=15% Similarity=0.219 Sum_probs=54.8
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCC-------------------cccHHHHHH-----
Q 021218 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-------------------SRSFAEARA----- 159 (316)
Q Consensus 105 ~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~-------------------~~s~~~A~~----- 159 (316)
...|++ ++|.|||.|-+|..++++|... |. ++.+.++.. .+....+++
T Consensus 23 q~~l~~-~~VlvvG~GglG~~va~~La~~------Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n 95 (251)
T 1zud_1 23 QQKLLD-SQVLIIGLGGLGTPAALYLAGA------GVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLN 95 (251)
T ss_dssp HHHHHT-CEEEEECCSTTHHHHHHHHHHT------TCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred HHHHhc-CcEEEEccCHHHHHHHHHHHHc------CCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHC
Confidence 467888 9999999999999999999998 76 455553321 111111111
Q ss_pred CCceec--CCCc--CCHHhhhccCCEEEEcccCchHHHHHHHHH
Q 021218 160 AGFTEE--NGTL--GDIYETISGSDLVLLLISDAAQADNYEKIF 199 (316)
Q Consensus 160 ~G~~~~--~~t~--~~~~e~i~~ADIViLavp~~~~~~vi~ei~ 199 (316)
.++..+ .... .+..+.++++|+||.++........+++..
T Consensus 96 p~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~ 139 (251)
T 1zud_1 96 PDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAAC 139 (251)
T ss_dssp TTSEEEEECSCCCHHHHHHHHHHCSEEEECCSSHHHHHHHHHHH
T ss_pred CCCEEEEEeccCCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHH
Confidence 121110 0001 134567889999999998666555666543
No 344
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=94.96 E-value=0.027 Score=51.46 Aligned_cols=73 Identities=22% Similarity=0.196 Sum_probs=51.0
Q ss_pred ccCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC----C--ceecCCCcCC---HHhhh
Q 021218 107 AFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----G--FTEENGTLGD---IYETI 176 (316)
Q Consensus 107 ~l~G~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~----G--~~~~~~t~~~---~~e~i 176 (316)
+++| +++-|+| .|-+|.++++.|.+. |.+|++..|+.++..+.+.+. + +...| ..+ ..+++
T Consensus 116 ~l~g-k~vlVtGaaGGiG~aia~~L~~~------G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D--~~~~~~~~~~~ 186 (287)
T 1lu9_A 116 SVKG-KKAVVLAGTGPVGMRSAALLAGE------GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAE--TADDASRAEAV 186 (287)
T ss_dssp CCTT-CEEEEETCSSHHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEE--CCSHHHHHHHT
T ss_pred CCCC-CEEEEECCCcHHHHHHHHHHHHC------cCEEEEEECCHHHHHHHHHHHHhcCCcEEEEec--CCCHHHHHHHH
Confidence 4789 9999999 999999999999998 988888777644333333221 2 11101 222 45678
Q ss_pred ccCCEEEEcccC
Q 021218 177 SGSDLVLLLISD 188 (316)
Q Consensus 177 ~~ADIViLavp~ 188 (316)
++.|+||.+++.
T Consensus 187 ~~~DvlVn~ag~ 198 (287)
T 1lu9_A 187 KGAHFVFTAGAI 198 (287)
T ss_dssp TTCSEEEECCCT
T ss_pred HhCCEEEECCCc
Confidence 889999999974
No 345
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=94.91 E-value=0.026 Score=53.97 Aligned_cols=71 Identities=15% Similarity=0.081 Sum_probs=44.2
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCc--EEEEEecCCcccHHHHH--HCC-ceecC-CCcCCHHhhhccCCE
Q 021218 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR--AAG-FTEEN-GTLGDIYETISGSDL 181 (316)
Q Consensus 109 ~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~~s~~~A~--~~G-~~~~~-~t~~~~~e~i~~ADI 181 (316)
.+ +||+|||. |.+|.++|..+... |. ++.+.+....+....+. ..+ +.... ....+..+++++||+
T Consensus 7 ~~-~KV~ViGaaG~VG~~~a~~l~~~------g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADv 79 (343)
T 3fi9_A 7 TE-EKLTIVGAAGMIGSNMAQTAAMM------RLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKY 79 (343)
T ss_dssp CS-SEEEEETTTSHHHHHHHHHHHHT------TCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEE
T ss_pred CC-CEEEEECCCChHHHHHHHHHHhc------CCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCE
Confidence 35 89999997 99999999988877 64 56555443221111111 111 11000 012467788999999
Q ss_pred EEEcc
Q 021218 182 VLLLI 186 (316)
Q Consensus 182 ViLav 186 (316)
||++.
T Consensus 80 Vvita 84 (343)
T 3fi9_A 80 IVSSG 84 (343)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 99986
No 346
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.90 E-value=0.11 Score=51.20 Aligned_cols=86 Identities=12% Similarity=0.079 Sum_probs=56.7
Q ss_pred ccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH-CCceecCCCcCCHHhhhccC
Q 021218 101 FNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTEENGTLGDIYETISGS 179 (316)
Q Consensus 101 F~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~-~G~~~~~~t~~~~~e~i~~A 179 (316)
|+++ -+++| ++|.|||.|..|.+-++.|.+. |.+|.+.........+...+ .++....+.. .++.+.++
T Consensus 4 ~P~~-~~l~~-~~vlVvGgG~va~~k~~~L~~~------ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~--~~~~l~~~ 73 (457)
T 1pjq_A 4 LPIF-CQLRD-RDCLIVGGGDVAERKARLLLEA------GARLTVNALTFIPQFTVWANEGMLTLVEGPF--DETLLDSC 73 (457)
T ss_dssp EEEE-ECCBT-CEEEEECCSHHHHHHHHHHHHT------TBEEEEEESSCCHHHHHHHTTTSCEEEESSC--CGGGGTTC
T ss_pred eeeE-EECCC-CEEEEECCCHHHHHHHHHHHhC------cCEEEEEcCCCCHHHHHHHhcCCEEEEECCC--CccccCCc
Confidence 4433 67899 9999999999999999999999 98887777653333322222 2332211111 23446799
Q ss_pred CEEEEcccCchHHH-HHH
Q 021218 180 DLVLLLISDAAQAD-NYE 196 (316)
Q Consensus 180 DIViLavp~~~~~~-vi~ 196 (316)
|+||.++-+..... ++.
T Consensus 74 ~lVi~at~~~~~n~~i~~ 91 (457)
T 1pjq_A 74 WLAIAATDDDTVNQRVSD 91 (457)
T ss_dssp SEEEECCSCHHHHHHHHH
T ss_pred cEEEEcCCCHHHHHHHHH
Confidence 99999877665433 443
No 347
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.89 E-value=0.16 Score=47.70 Aligned_cols=93 Identities=20% Similarity=0.224 Sum_probs=62.5
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCCceec-CCCc--CCHHhhhc-----cC
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~t~--~~~~e~i~-----~A 179 (316)
+| .+|.|+|.|.+|...++.++.. |. +|+ +...+++..+.+++.|.... +... .+..+.++ ..
T Consensus 190 ~g-~~VlV~GaG~vG~~avqla~~~------Ga~~Vi-~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~ 261 (373)
T 2fzw_A 190 PG-SVCAVFGLGGVGLAVIMGCKVA------GASRII-GVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGV 261 (373)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCSEEE-EECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEE-EEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCC
Confidence 57 8999999999999999999998 88 554 44444566778888885310 1000 13333333 48
Q ss_pred CEEEEcccCchHHHHHHHHHhcCCCC-cEEEEeC
Q 021218 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLSH 212 (316)
Q Consensus 180 DIViLavp~~~~~~vi~ei~~~mk~g-aiLid~a 212 (316)
|+|+-++... ..+++..+.++++ -.++.++
T Consensus 262 D~vid~~g~~---~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 262 DYSFECIGNV---KVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEECS
T ss_pred CEEEECCCcH---HHHHHHHHhhccCCcEEEEEe
Confidence 9999998753 2456666778887 6665443
No 348
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=94.89 E-value=0.061 Score=50.01 Aligned_cols=66 Identities=26% Similarity=0.336 Sum_probs=40.8
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCc--EEEEEecC-CcccHH-HHHH--------CCceecCCCcCCHHhhhcc
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRK-GSRSFA-EARA--------AGFTEENGTLGDIYETISG 178 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~-~~~s~~-~A~~--------~G~~~~~~t~~~~~e~i~~ 178 (316)
+||+||| .|.+|.+++..|... ++ ++.+.+.+ ++...+ .+.+ ...... ..+ .+++++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~------~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~---~~~-~~a~~~ 70 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALR------DIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVR---QGG-YEDTAG 70 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEE---ECC-GGGGTT
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEE---eCC-HHHhCC
Confidence 5899999 999999999998776 54 45555441 221111 1111 011110 123 677999
Q ss_pred CCEEEEccc
Q 021218 179 SDLVLLLIS 187 (316)
Q Consensus 179 ADIViLavp 187 (316)
||+||++..
T Consensus 71 aDvVi~~ag 79 (303)
T 1o6z_A 71 SDVVVITAG 79 (303)
T ss_dssp CSEEEECCC
T ss_pred CCEEEEcCC
Confidence 999999975
No 349
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=94.87 E-value=0.066 Score=50.28 Aligned_cols=69 Identities=12% Similarity=0.107 Sum_probs=43.1
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCc-------EEEEEecCC----cc-cHHHH--HHCC---ceecCCCcCCHH
Q 021218 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI-------VVKVGLRKG----SR-SFAEA--RAAG---FTEENGTLGDIY 173 (316)
Q Consensus 112 kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~-------~Vivg~r~~----~~-s~~~A--~~~G---~~~~~~t~~~~~ 173 (316)
+||.|||. |.+|.+++..|... ++ ++.+. +.+ ++ ....+ ...+ +...-....+..
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~------~~~~~~~~~ev~l~-Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~ 78 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANG------DMLGKDQPVILQLL-EIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPM 78 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT------TTTCTTCCEEEEEE-CCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHH
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCcCCCCCCEEEEE-cCCCccccccchhhHHHHhhhcccccCcEEEecCcH
Confidence 79999997 99999999999876 54 55554 443 21 11111 1221 110000124678
Q ss_pred hhhccCCEEEEccc
Q 021218 174 ETISGSDLVLLLIS 187 (316)
Q Consensus 174 e~i~~ADIViLavp 187 (316)
+++++||+||++..
T Consensus 79 ~al~~aD~Vi~~ag 92 (329)
T 1b8p_A 79 TAFKDADVALLVGA 92 (329)
T ss_dssp HHTTTCSEEEECCC
T ss_pred HHhCCCCEEEEeCC
Confidence 89999999998864
No 350
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.85 E-value=0.14 Score=47.36 Aligned_cols=97 Identities=16% Similarity=0.117 Sum_probs=65.2
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCcCCHHhhh------cc
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SG 178 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~~~e~i------~~ 178 (316)
..-+| +++.|+|.|.+|...++.++.. |..+++..+.+++..+.+++.|.... +....+..+.+ ..
T Consensus 157 ~~~~g-~~VlV~GaG~vG~~aiq~ak~~------G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g 229 (346)
T 4a2c_A 157 QGCEN-KNVIIIGAGTIGLLAIQCAVAL------GAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRF 229 (346)
T ss_dssp TCCTT-SEEEEECCSHHHHHHHHHHHHT------TCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCS
T ss_pred ccCCC-CEEEEECCCCcchHHHHHHHHc------CCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCC
Confidence 33468 9999999999999999999998 88766666666677888999996421 11112333322 24
Q ss_pred CCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 179 ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
.|+|+-++... ..++..++.++++..++..+
T Consensus 230 ~d~v~d~~G~~---~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 230 NQLILETAGVP---QTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp SEEEEECSCSH---HHHHHHHHHCCTTCEEEECC
T ss_pred ccccccccccc---chhhhhhheecCCeEEEEEe
Confidence 68888777543 24455556677777666543
No 351
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.85 E-value=0.18 Score=48.19 Aligned_cols=97 Identities=18% Similarity=0.136 Sum_probs=63.4
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCCceec-CCCcCCHHhhhc------cC
Q 021218 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GS 179 (316)
Q Consensus 108 l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~~~e~i~------~A 179 (316)
-+| .+|.|+|.|.+|...++.++.. |. +|+ +.+.+++..+.+++.|.... +....+..+.+. ..
T Consensus 212 ~~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi-~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~ 283 (404)
T 3ip1_A 212 RPG-DNVVILGGGPIGLAAVAILKHA------GASKVI-LSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGA 283 (404)
T ss_dssp CTT-CEEEEECCSHHHHHHHHHHHHT------TCSEEE-EECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCC
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHc------CCCEEE-EECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCC
Confidence 357 8999999999999999999998 98 554 55555666788888885321 111123333332 58
Q ss_pred CEEEEcccCch-HHH-HHHHHHhcCCCCcEEEEeC
Q 021218 180 DLVLLLISDAA-QAD-NYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 180 DIViLavp~~~-~~~-vi~ei~~~mk~gaiLid~a 212 (316)
|+|+-++.... ..+ .++-+...++++-.++.++
T Consensus 284 D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 284 KLFLEATGVPQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp SEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred CEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 99999998762 222 3333324447777766554
No 352
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=94.83 E-value=0.044 Score=52.79 Aligned_cols=91 Identities=13% Similarity=0.088 Sum_probs=52.9
Q ss_pred CCEEEEEc-ccchHHHHHH-HHHhhhhhhcCCc---EEEEEecCCc-ccHHHHHHCCceecCCCcCCHHhhhccCCEEEE
Q 021218 111 INQIGVIG-WGSQGPAQAQ-NLRDSLAEAKSDI---VVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (316)
Q Consensus 111 ~kkIGIIG-~G~mG~AlA~-~Lr~~~~~~g~G~---~Vivg~r~~~-~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViL 184 (316)
|++|||+| .|.+|..+.+ .|... ++ .+.....++. +.........+... ...+.++ ++++|+|+.
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~------~~~~v~i~~~~~~s~G~~v~~~~g~~i~~~--~~~~~~~-~~~~DvVf~ 71 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEER------DFDAIRPVFFSTSQLGQAAPSFGGTTGTLQ--DAFDLEA-LKALDIIVT 71 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT------GGGGSEEEEEESSSTTSBCCGGGTCCCBCE--ETTCHHH-HHTCSEEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcC------CCCeEEEEEEEeCCCCCCccccCCCceEEE--ecCChHH-hcCCCEEEE
Confidence 67999999 9999999999 45443 32 3333222211 11100000111110 0123333 579999999
Q ss_pred cccCchHHHHHHHHHhcCCCCc--EEEEeCC
Q 021218 185 LISDAAQADNYEKIFSCMKPNS--ILGLSHG 213 (316)
Q Consensus 185 avp~~~~~~vi~ei~~~mk~ga--iLid~aG 213 (316)
|+|.....++...+.+ .|. +|+|.++
T Consensus 72 a~g~~~s~~~a~~~~~---~G~k~vVID~ss 99 (367)
T 1t4b_A 72 CQGGDYTNEIYPKLRE---SGWQGYWIDAAS 99 (367)
T ss_dssp CSCHHHHHHHHHHHHH---TTCCCEEEECSS
T ss_pred CCCchhHHHHHHHHHH---CCCCEEEEcCCh
Confidence 9998777777776654 354 7888765
No 353
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=94.81 E-value=0.032 Score=53.11 Aligned_cols=89 Identities=13% Similarity=0.094 Sum_probs=52.3
Q ss_pred CEEEEEcccchHHHHHHHHHhh---hhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDS---LAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~---~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~ 188 (316)
.+|||||+|.||..+++.+++. +.+.|.++++....+++.. .+ .++.. .....|.++++ +.|+|+.|+|.
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~---~~--~~~~~-~~~~~d~~~ll-~iDvVve~t~~ 76 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPR---KP--RAIPQ-ELLRAEPFDLL-EADLVVEAMGG 76 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTT---SC--CSSCG-GGEESSCCCCT-TCSEEEECCCC
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHH---Hh--hccCc-ccccCCHHHHh-CCCEEEECCCC
Confidence 5799999999999999998775 2222223454333333221 11 12210 01134677778 99999999998
Q ss_pred chH-HHHHHHHHhcCCCCcEEEE
Q 021218 189 AAQ-ADNYEKIFSCMKPNSILGL 210 (316)
Q Consensus 189 ~~~-~~vi~ei~~~mk~gaiLid 210 (316)
... .+.+.+. |+.|+.|+.
T Consensus 77 ~~~a~~~~~~A---L~aGKhVVt 96 (332)
T 2ejw_A 77 VEAPLRLVLPA---LEAGIPLIT 96 (332)
T ss_dssp SHHHHHHHHHH---HHTTCCEEE
T ss_pred cHHHHHHHHHH---HHcCCeEEE
Confidence 754 3344443 334665544
No 354
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.79 E-value=0.1 Score=46.71 Aligned_cols=82 Identities=23% Similarity=0.281 Sum_probs=52.7
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCccc--HHHH------HHCCceecCCCcCC---HHhhhcc
Q 021218 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS--FAEA------RAAGFTEENGTLGD---IYETISG 178 (316)
Q Consensus 111 ~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s--~~~A------~~~G~~~~~~t~~~---~~e~i~~ 178 (316)
||+|.|+|. |.+|.++++.|.+. |++|++..|+.... .+.+ ...|+........+ +.+++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~ 77 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL------GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKN 77 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT------TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC------CCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcC
Confidence 378999995 99999999999998 88887777764321 1111 12454321112333 4567889
Q ss_pred CCEEEEcccCch---HHHHHHHH
Q 021218 179 SDLVLLLISDAA---QADNYEKI 198 (316)
Q Consensus 179 ADIViLavp~~~---~~~vi~ei 198 (316)
+|+||.+..... +..+++..
T Consensus 78 ~d~vi~~a~~~~~~~~~~l~~aa 100 (308)
T 1qyc_A 78 VDVVISTVGSLQIESQVNIIKAI 100 (308)
T ss_dssp CSEEEECCCGGGSGGGHHHHHHH
T ss_pred CCEEEECCcchhhhhHHHHHHHH
Confidence 999999887542 33455533
No 355
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.76 E-value=0.11 Score=48.95 Aligned_cols=93 Identities=20% Similarity=0.320 Sum_probs=63.1
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCCceec-CCC--cCCHHhhhc-----cC
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGT--LGDIYETIS-----GS 179 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~t--~~~~~e~i~-----~A 179 (316)
+| .+|.|+|.|.+|...++.++.. |. +|+ +.+.+++..+.+++.|.... +.. ..+..+.++ ..
T Consensus 193 ~g-~~VlV~GaG~vG~~a~q~a~~~------Ga~~Vi-~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 193 PG-SNVAIFGLGTVGLAVAEGAKTA------GASRII-GIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp TT-CCEEEECCSHHHHHHHHHHHHH------TCSCEE-EECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEE-EEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCC
Confidence 57 8999999999999999999998 87 555 44444566788999886421 100 123333333 48
Q ss_pred CEEEEcccCchHHHHHHHHHhcCCCC-cEEEEeC
Q 021218 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLSH 212 (316)
Q Consensus 180 DIViLavp~~~~~~vi~ei~~~mk~g-aiLid~a 212 (316)
|+|+-++... +.++.....++++ -.++.++
T Consensus 265 D~vid~~g~~---~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 265 DYSFECIGNV---SVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEECS
T ss_pred CEEEECCCCH---HHHHHHHHHhhccCCEEEEEc
Confidence 9999998753 3456666778885 5555443
No 356
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.76 E-value=0.063 Score=50.02 Aligned_cols=91 Identities=19% Similarity=0.220 Sum_probs=65.7
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEccc
Q 021218 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (316)
Q Consensus 108 l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp 187 (316)
-+| .+|.|+|.|.+|...++.++.. |.+|+...+ +++..+.+++.|.... ..+.+++.+..|+|+-++.
T Consensus 175 ~~g-~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~~~-~~~~~~~~~~lGa~~v---~~~~~~~~~~~D~vid~~g 243 (348)
T 3two_A 175 TKG-TKVGVAGFGGLGSMAVKYAVAM------GAEVSVFAR-NEHKKQDALSMGVKHF---YTDPKQCKEELDFIISTIP 243 (348)
T ss_dssp CTT-CEEEEESCSHHHHHHHHHHHHT------TCEEEEECS-SSTTHHHHHHTTCSEE---ESSGGGCCSCEEEEEECCC
T ss_pred CCC-CEEEEECCcHHHHHHHHHHHHC------CCeEEEEeC-CHHHHHHHHhcCCCee---cCCHHHHhcCCCEEEECCC
Confidence 368 9999999999999999999998 988665544 4556778888886431 2233444447899999988
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 188 DAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
... .++...+.++++-.++.++
T Consensus 244 ~~~---~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 244 THY---DLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp SCC---CHHHHHTTEEEEEEEEECC
T ss_pred cHH---HHHHHHHHHhcCCEEEEEC
Confidence 663 3455566777877766553
No 357
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=94.75 E-value=0.048 Score=51.65 Aligned_cols=69 Identities=17% Similarity=0.223 Sum_probs=49.2
Q ss_pred cccCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCC---cccHHHHHHCC--ceecCCCcCCHHhhhccC
Q 021218 106 DAFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG---SRSFAEARAAG--FTEENGTLGDIYETISGS 179 (316)
Q Consensus 106 ~~l~G~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~---~~s~~~A~~~G--~~~~~~t~~~~~e~i~~A 179 (316)
..|+| .||++|| .+++..|++..+... |+++.+...++ +... .+++.| +.. ..+++|+++++
T Consensus 150 g~l~g-lkva~vGD~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~-~~~~~g~~v~~----~~d~~eav~~a 217 (309)
T 4f2g_A 150 GPIRG-KTVAWVGDANNMLYTWIQAARIL------DFKLQLSTPPGYALDAKL-VDAESAPFYQV----FDDPNEACKGA 217 (309)
T ss_dssp SCCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCGGGCCCGGG-SCGGGGGGEEE----CSSHHHHTTTC
T ss_pred CCCCC-CEEEEECCCcchHHHHHHHHHHc------CCEEEEECCcccCCCHHH-HHHHcCCeEEE----EcCHHHHhcCC
Confidence 45889 9999999 468999999999998 99887765432 1101 012233 222 56899999999
Q ss_pred CEEEEcc
Q 021218 180 DLVLLLI 186 (316)
Q Consensus 180 DIViLav 186 (316)
|+|..-+
T Consensus 218 Dvvyt~~ 224 (309)
T 4f2g_A 218 DLVTTDV 224 (309)
T ss_dssp SEEEECC
T ss_pred CEEEecc
Confidence 9999854
No 358
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=94.72 E-value=0.098 Score=49.25 Aligned_cols=72 Identities=21% Similarity=0.124 Sum_probs=42.0
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH--CC-c--eecCCCcCCHHhhhccCCEEEEc
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA--AG-F--TEENGTLGDIYETISGSDLVLLL 185 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~--~G-~--~~~~~t~~~~~e~i~~ADIViLa 185 (316)
|||+||| .|.+|.+++..|.... +...++.+.+... .....+.+ .. . ........+..+.+++||+||++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~---~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ 76 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQL---PSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLIS 76 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHS---CTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEe
Confidence 6899999 9999999999886530 0123555555443 22222221 11 1 11000002456789999999998
Q ss_pred cc
Q 021218 186 IS 187 (316)
Q Consensus 186 vp 187 (316)
..
T Consensus 77 ag 78 (312)
T 3hhp_A 77 AG 78 (312)
T ss_dssp CS
T ss_pred CC
Confidence 73
No 359
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=94.72 E-value=0.15 Score=48.24 Aligned_cols=72 Identities=14% Similarity=0.081 Sum_probs=51.6
Q ss_pred cccC-CCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCC----cccHHHH----HHCCceecCCCcCCHHhh
Q 021218 106 DAFN-GINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAEA----RAAGFTEENGTLGDIYET 175 (316)
Q Consensus 106 ~~l~-G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~----~~s~~~A----~~~G~~~~~~t~~~~~e~ 175 (316)
..|+ | .+|++||= +++..|++..+... |+++.+...++ +...+.+ ++.|.... ...+++|+
T Consensus 141 g~l~~g-l~va~vGD~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~--~~~d~~ea 211 (307)
T 3tpf_A 141 KMQNGI-AKVAFIGDSNNMCNSWLITAAIL------GFEISIAMPKNYKISPEIWEFAMKQALISGAKIS--LGYDKFEA 211 (307)
T ss_dssp CCGGGC-CEEEEESCSSHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEE--EESCHHHH
T ss_pred CCCCCC-CEEEEEcCCCccHHHHHHHHHHc------CCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEE--EEcCHHHH
Confidence 4678 9 99999994 58999999999998 99887775442 1122222 24453211 14689999
Q ss_pred hccCCEEEEcc
Q 021218 176 ISGSDLVLLLI 186 (316)
Q Consensus 176 i~~ADIViLav 186 (316)
++++|+|..-+
T Consensus 212 v~~aDvvyt~~ 222 (307)
T 3tpf_A 212 LKDKDVVITDT 222 (307)
T ss_dssp HTTCSEEEECC
T ss_pred hcCCCEEEecC
Confidence 99999999877
No 360
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.71 E-value=0.053 Score=50.98 Aligned_cols=94 Identities=17% Similarity=0.203 Sum_probs=63.1
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCc--ccHHHHHHCCceecCCCcCCHHhhh----ccCC
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS--RSFAEARAAGFTEENGTLGDIYETI----SGSD 180 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~--~s~~~A~~~G~~~~~~t~~~~~e~i----~~AD 180 (316)
.++| ++|.|+|.|.+|...++.++.. |.+|++..++.. +..+.+++.|....+ .. +..+.+ ...|
T Consensus 178 ~~~g-~~VlV~GaG~vG~~~~q~a~~~------Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~-~~-~~~~~~~~~~~~~d 248 (366)
T 2cdc_A 178 TLNC-RKVLVVGTGPIGVLFTLLFRTY------GLEVWMANRREPTEVEQTVIEETKTNYYN-SS-NGYDKLKDSVGKFD 248 (366)
T ss_dssp SSTT-CEEEEESCHHHHHHHHHHHHHH------TCEEEEEESSCCCHHHHHHHHHHTCEEEE-CT-TCSHHHHHHHCCEE
T ss_pred cCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCccchHHHHHHHHhCCceec-hH-HHHHHHHHhCCCCC
Confidence 3459 9999999999999999999998 988776665541 345677777764311 11 211222 3589
Q ss_pred EEEEcccCchHHHHH-HHHHhcCCCCcEEEEeC
Q 021218 181 LVLLLISDAAQADNY-EKIFSCMKPNSILGLSH 212 (316)
Q Consensus 181 IViLavp~~~~~~vi-~ei~~~mk~gaiLid~a 212 (316)
+|+-++.... .+ +...+.|+++..++.++
T Consensus 249 ~vid~~g~~~---~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 249 VIIDATGADV---NILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp EEEECCCCCT---HHHHHHGGGEEEEEEEEECS
T ss_pred EEEECCCChH---HHHHHHHHHHhcCCEEEEEe
Confidence 9999987643 34 56667777766655443
No 361
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=94.71 E-value=0.077 Score=52.37 Aligned_cols=70 Identities=14% Similarity=0.136 Sum_probs=49.9
Q ss_pred ccCCCCEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEc
Q 021218 107 AFNGINQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~A-lA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLa 185 (316)
++..+++|.|||.|-.|.+ +|+.|.+. |++|.+.+...+...+..++.|+....+. +. +.++.+|+||+.
T Consensus 15 ~~~~~~~v~viGiG~sG~s~~A~~l~~~------G~~V~~~D~~~~~~~~~l~~~gi~~~~g~--~~-~~~~~a~~vv~s 85 (491)
T 2f00_A 15 EMRRVRHIHFVGIGGAGMGGIAEVLANE------GYQISGSDLAPNPVTQQLMNLGATIYFNH--RP-ENVRDASVVVVS 85 (491)
T ss_dssp CCTTCCEEEEETTTSTTHHHHHHHHHHT------TCEEEEECSSCCHHHHHHHHTTCEEESSC--CG-GGGTTCSEEEEC
T ss_pred ccccCCEEEEEEcCHHHHHHHHHHHHhC------CCeEEEECCCCCHHHHHHHHCCCEEECCC--CH-HHcCCCCEEEEC
Confidence 3445589999999999998 99999998 99887776655443344556787643221 23 346789999884
No 362
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=94.66 E-value=0.028 Score=53.41 Aligned_cols=69 Identities=22% Similarity=0.165 Sum_probs=45.1
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcc-cHHHHHHCCceecCCCcCC---HHhhhccCCEE
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR-SFAEARAAGFTEENGTLGD---IYETISGSDLV 182 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~-s~~~A~~~G~~~~~~t~~~---~~e~i~~ADIV 182 (316)
-++| ++|+|||.|.+|..+++.+++. |+++++.+..... ....+ ..... ....+ +.++++++|+|
T Consensus 11 ~~~~-k~IlIlG~G~~g~~la~aa~~~------G~~vi~~d~~~~~~~~~~a--d~~~~--~~~~d~~~l~~~~~~~dvI 79 (389)
T 3q2o_A 11 ILPG-KTIGIIGGGQLGRMMALAAKEM------GYKIAVLDPTKNSPCAQVA--DIEIV--ASYDDLKAIQHLAEISDVV 79 (389)
T ss_dssp CCTT-SEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSTTCTTTTTC--SEEEE--CCTTCHHHHHHHHHTCSEE
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEeCCCCCchHHhC--CceEe--cCcCCHHHHHHHHHhCCEe
Confidence 4688 9999999999999999999999 9998777643211 11111 11111 11223 55677889988
Q ss_pred EEcc
Q 021218 183 LLLI 186 (316)
Q Consensus 183 iLav 186 (316)
....
T Consensus 80 ~~~~ 83 (389)
T 3q2o_A 80 TYEF 83 (389)
T ss_dssp EESC
T ss_pred eecc
Confidence 6543
No 363
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=94.58 E-value=0.078 Score=50.11 Aligned_cols=71 Identities=21% Similarity=0.212 Sum_probs=53.3
Q ss_pred cccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecCCc----ccHH----HHHHCC--ceecCCCcCCHH
Q 021218 106 DAFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS----RSFA----EARAAG--FTEENGTLGDIY 173 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G--~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~----~s~~----~A~~~G--~~~~~~t~~~~~ 173 (316)
..|+| .+|++||-| ++..|++..+... |+++.+...++- .-.+ .+++.| +.. ..+++
T Consensus 144 g~l~g-l~va~vGD~~~rva~Sl~~~~~~~------g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~----~~d~~ 212 (307)
T 2i6u_A 144 GALRG-LRLSYFGDGANNMAHSLLLGGVTA------GIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTV----TADAH 212 (307)
T ss_dssp SCCTT-CEEEEESCTTSHHHHHHHHHHHHT------TCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEE----ESCHH
T ss_pred CCcCC-eEEEEECCCCcCcHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EECHH
Confidence 56889 999999986 9999999999999 999887765431 1212 233566 332 46899
Q ss_pred hhhccCCEEEEccc
Q 021218 174 ETISGSDLVLLLIS 187 (316)
Q Consensus 174 e~i~~ADIViLavp 187 (316)
|+++++|+|..-+=
T Consensus 213 eav~~aDvvy~~~w 226 (307)
T 2i6u_A 213 AAAAGADVLVTDTW 226 (307)
T ss_dssp HHHTTCSEEEECCS
T ss_pred HHhcCCCEEEecce
Confidence 99999999998553
No 364
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.57 E-value=0.088 Score=49.76 Aligned_cols=95 Identities=19% Similarity=0.210 Sum_probs=64.6
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCcCCHHhhhc--------c
Q 021218 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS--------G 178 (316)
Q Consensus 108 l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~~~e~i~--------~ 178 (316)
-+| .+|.|+|.|.+|...++.++.. |...++..+.+++..+.+++.|.... +....+..+.+. .
T Consensus 181 ~~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg 253 (370)
T 4ej6_A 181 KAG-STVAILGGGVIGLLTVQLARLA------GATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGG 253 (370)
T ss_dssp CTT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTC
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCC
Confidence 357 9999999999999999999998 98334455555666778888886421 111234444444 3
Q ss_pred CCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 179 ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
.|+|+-++... +.+++....++++-.++.++
T Consensus 254 ~Dvvid~~G~~---~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 254 VDVVIECAGVA---ETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp EEEEEECSCCH---HHHHHHHHHEEEEEEEEECS
T ss_pred CCEEEECCCCH---HHHHHHHHHhccCCEEEEEe
Confidence 79999988743 24555566677777766554
No 365
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=94.55 E-value=0.078 Score=50.55 Aligned_cols=73 Identities=11% Similarity=0.088 Sum_probs=53.3
Q ss_pred cccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecCC----cccHH----HHHHCCceecCCCcCCHHhh
Q 021218 106 DAFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAGFTEENGTLGDIYET 175 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G--~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~----~~s~~----~A~~~G~~~~~~t~~~~~e~ 175 (316)
..|+| .+|++||-| ++..|++..+... |+++.+...++ +...+ .|++.|...+ ...+++|+
T Consensus 163 g~l~g-l~va~vGD~~~rva~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~--~~~d~~ea 233 (325)
T 1vlv_A 163 GRLKG-VKVVFMGDTRNNVATSLMIACAKM------GMNFVACGPEELKPRSDVFKRCQEIVKETDGSVS--FTSNLEEA 233 (325)
T ss_dssp SCSTT-CEEEEESCTTSHHHHHHHHHHHHT------TCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEE--EESCHHHH
T ss_pred CCcCC-cEEEEECCCCcCcHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEE--EEcCHHHH
Confidence 56889 999999985 9999999999999 99988776532 11222 2336663211 14689999
Q ss_pred hccCCEEEEccc
Q 021218 176 ISGSDLVLLLIS 187 (316)
Q Consensus 176 i~~ADIViLavp 187 (316)
++++|+|..-+=
T Consensus 234 v~~aDvvyt~~w 245 (325)
T 1vlv_A 234 LAGADVVYTDVW 245 (325)
T ss_dssp HTTCSEEEECCC
T ss_pred HccCCEEEeccc
Confidence 999999998554
No 366
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=94.54 E-value=0.14 Score=46.25 Aligned_cols=72 Identities=18% Similarity=0.146 Sum_probs=49.3
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHH---HHHCCceecCCCcCC---HHhhhccCCEEEE
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE---ARAAGFTEENGTLGD---IYETISGSDLVLL 184 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~---A~~~G~~~~~~t~~~---~~e~i~~ADIViL 184 (316)
++|.|+| .|.+|.++++.|.+. |++|++..|+.+...+. ....|+........+ +.++++++|+||.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~ 85 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKL------GHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVIS 85 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHT------TCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred CeEEEECCCchHHHHHHHHHHHC------CCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 5899999 599999999999998 88888777765322221 123454321112333 4567889999999
Q ss_pred cccCc
Q 021218 185 LISDA 189 (316)
Q Consensus 185 avp~~ 189 (316)
+....
T Consensus 86 ~a~~~ 90 (318)
T 2r6j_A 86 ALAFP 90 (318)
T ss_dssp CCCGG
T ss_pred CCchh
Confidence 88753
No 367
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=94.48 E-value=0.094 Score=42.90 Aligned_cols=109 Identities=18% Similarity=0.113 Sum_probs=70.4
Q ss_pred CCEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcc
Q 021218 111 INQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (316)
Q Consensus 111 ~kkIGIIG~----G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLav 186 (316)
.++|+|||. +..|..+.++|++. |++|+-.+.+... -.|... ..++.|+=. .|++++++
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~------g~~V~pVnP~~~~------i~G~~~----y~sl~dlp~-vDlavi~~ 66 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSH------GHEFIPVGRKKGE------VLGKTI----INERPVIEG-VDTVTLYI 66 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHH------TCCEEEESSSCSE------ETTEEC----BCSCCCCTT-CCEEEECS
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHC------CCeEEEECCCCCc------CCCeec----cCChHHCCC-CCEEEEEe
Confidence 378999996 56899999999998 8876655443221 135442 345555545 89999999
Q ss_pred cCchHHHHHHHHHhcCCCCcEEEEeCCchhhhhhccccCCCCCccEEEeccCCCchh
Q 021218 187 SDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (316)
Q Consensus 187 p~~~~~~vi~ei~~~mk~gaiLid~aGv~l~~l~~~~~~~~~~i~vI~vhPn~pg~~ 243 (316)
|+....+++++.... .... ++...|+.-..+.+ ..-..+++++. |+.+-.
T Consensus 67 p~~~v~~~v~e~~~~-g~k~-v~~~~G~~~~e~~~--~a~~~Girvv~---nC~gv~ 116 (122)
T 3ff4_A 67 NPQNQLSEYNYILSL-KPKR-VIFNPGTENEELEE--ILSENGIEPVI---GCTLVM 116 (122)
T ss_dssp CHHHHGGGHHHHHHH-CCSE-EEECTTCCCHHHHH--HHHHTTCEEEE---SCHHHH
T ss_pred CHHHHHHHHHHHHhc-CCCE-EEECCCCChHHHHH--HHHHcCCeEEC---CcCeEE
Confidence 999999999987654 2233 56788875222221 01124677762 554443
No 368
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.46 E-value=0.18 Score=46.93 Aligned_cols=93 Identities=14% Similarity=0.075 Sum_probs=62.4
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCc-CC-HHhh---h-----c
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTL-GD-IYET---I-----S 177 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~-~~-~~e~---i-----~ 177 (316)
+| ++|.|+|.|.+|...++.++.. |.+|+ +.+.+++..+.+++.|.... +... .+ .+++ . .
T Consensus 168 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~Vi-~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~ 239 (352)
T 1e3j_A 168 LG-TTVLVIGAGPIGLVSVLAAKAY------GAFVV-CTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGD 239 (352)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCEEE-EEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEE-EEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCC
Confidence 67 9999999999999999999988 98854 44444566678888885310 1010 12 2222 2 3
Q ss_pred cCCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 178 ~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
..|+|+-++.... .+++.++.++++..++.++
T Consensus 240 g~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 240 LPNVTIDCSGNEK---CITIGINITRTGGTLMLVG 271 (352)
T ss_dssp CCSEEEECSCCHH---HHHHHHHHSCTTCEEEECS
T ss_pred CCCEEEECCCCHH---HHHHHHHHHhcCCEEEEEe
Confidence 5899999987542 3555566778877766553
No 369
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.44 E-value=0.053 Score=51.66 Aligned_cols=96 Identities=18% Similarity=0.221 Sum_probs=63.8
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCCceecCCCcCCH-Hhhhc------cCC
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDI-YETIS------GSD 180 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~-~e~i~------~AD 180 (316)
+| .+|.|+|.|.+|...++.++.. |. +|+... .+++..+.+++.|...-+....+. .+.+. ..|
T Consensus 185 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~-~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~D 256 (398)
T 2dph_A 185 PG-SHVYIAGAGPVGRCAAAGARLL------GAACVIVGD-QNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVD 256 (398)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEEE-SCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEEc-CCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCC
Confidence 57 8999999999999999999988 87 665544 445566788888863111111122 23222 589
Q ss_pred EEEEcccCch-----------HHHHHHHHHhcCCCCcEEEEeC
Q 021218 181 LVLLLISDAA-----------QADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 181 IViLavp~~~-----------~~~vi~ei~~~mk~gaiLid~a 212 (316)
+||-++.... ....+++.++.++++-.++.++
T Consensus 257 vvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 257 CGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp EEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred EEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 9999997542 1235666667777877666443
No 370
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.40 E-value=0.13 Score=48.21 Aligned_cols=93 Identities=14% Similarity=0.102 Sum_probs=61.9
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCCceec-CCC---cCCHHhhh-----cc
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGT---LGDIYETI-----SG 178 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~t---~~~~~e~i-----~~ 178 (316)
+| .+|.|+|.|.+|...++.++.. |. +|+... .+++..+.+++.|.... +.. ..+..+.+ ..
T Consensus 171 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~-~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g 242 (356)
T 1pl8_A 171 LG-HKVLVCGAGPIGMVTLLVAKAM------GAAQVVVTD-LSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCK 242 (356)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEEE-SCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSC
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEEC-CCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCC
Confidence 57 8999999999999999999988 88 665544 44556678888886310 100 00111122 35
Q ss_pred CCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 179 ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
.|+|+-++.... .+++.+..++++-.++.++
T Consensus 243 ~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 243 PEVTIECTGAEA---SIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp CSEEEECSCCHH---HHHHHHHHSCTTCEEEECS
T ss_pred CCEEEECCCChH---HHHHHHHHhcCCCEEEEEe
Confidence 899999987532 3555566788877766553
No 371
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.37 E-value=0.076 Score=49.48 Aligned_cols=93 Identities=18% Similarity=0.174 Sum_probs=63.0
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCCceec-CCCcCCHHhhhc------cCC
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GSD 180 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~~~e~i~------~AD 180 (316)
+| ++|.|+|.|.+|...++.++.. |. +|+...++ ++..+.+++.|.... +....+..+.+. ..|
T Consensus 167 ~g-~~VlV~GaG~vG~~~~q~a~~~------Ga~~Vi~~~~~-~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D 238 (348)
T 2d8a_A 167 SG-KSVLITGAGPLGLLGIAVAKAS------GAYPVIVSEPS-DFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVD 238 (348)
T ss_dssp TT-CCEEEECCSHHHHHHHHHHHHT------TCCSEEEECSC-HHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEECCC-HHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCC
Confidence 78 9999999999999999999998 88 76655544 555677777775310 111123333332 589
Q ss_pred EEEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 181 IViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
+|+-++... +.+++..+.++++..++.++
T Consensus 239 ~vid~~g~~---~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 239 VFLEFSGAP---KALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EEEECSCCH---HHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCCCH---HHHHHHHHHHhcCCEEEEEc
Confidence 999998753 34555566677777666554
No 372
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.30 E-value=0.096 Score=49.69 Aligned_cols=97 Identities=22% Similarity=0.227 Sum_probs=63.8
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCc-CCHHhhh------ccCCE
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL-GDIYETI------SGSDL 181 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~-~~~~e~i------~~ADI 181 (316)
+| .+|.|+|.|.+|...++.++.. |...+++.+.+++..+.+++.|...-+... .+..+.+ ...|+
T Consensus 185 ~g-~~VlV~GaG~vG~~aiqlAk~~------Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dv 257 (398)
T 1kol_A 185 PG-STVYVAGAGPVGLAAAASARLL------GAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDC 257 (398)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEE
T ss_pred CC-CEEEEECCcHHHHHHHHHHHHC------CCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCCE
Confidence 57 8999999999999999999988 874344444555667888888863211111 1123322 24799
Q ss_pred EEEcccCch------------HHHHHHHHHhcCCCCcEEEEeC
Q 021218 182 VLLLISDAA------------QADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 182 ViLavp~~~------------~~~vi~ei~~~mk~gaiLid~a 212 (316)
|+-++.... ....+++.++.++++-.++.++
T Consensus 258 vid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 258 AVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp EEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred EEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 999987542 1135666667777776666543
No 373
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=94.28 E-value=0.088 Score=52.48 Aligned_cols=91 Identities=16% Similarity=0.148 Sum_probs=58.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCC-HH-hhhccCCEEEEcccCc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD-IY-ETISGSDLVLLLISDA 189 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~-~~-e~i~~ADIViLavp~~ 189 (316)
+++.|||+|..|..+|+.|.+. |++|++.+.+.+... .+. -+...|.+-.+ +. .-++++|.++.+++++
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~------g~~v~vid~d~~~~~-~~~--~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d 419 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK------PVPFILIDRQESPVC-NDH--VVVYGDATVGQTLRQAGIDRASGIIVTTNDD 419 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCCSSC-CSS--CEEESCSSSSTHHHHHTTTSCSEEEECCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHC------CCCEEEEECChHHHh-hcC--CEEEeCCCCHHHHHhcCccccCEEEEECCCc
Confidence 6799999999999999999998 988877766544322 111 23322222111 22 2478999999999987
Q ss_pred hHHHHHHHHHhcCCCC-cEEEEe
Q 021218 190 AQADNYEKIFSCMKPN-SILGLS 211 (316)
Q Consensus 190 ~~~~vi~ei~~~mk~g-aiLid~ 211 (316)
...-++......+.+. .++.-+
T Consensus 420 ~~ni~~~~~ak~l~~~~~iiar~ 442 (565)
T 4gx0_A 420 STNIFLTLACRHLHSHIRIVARA 442 (565)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEEE
T ss_pred hHHHHHHHHHHHHCCCCEEEEEE
Confidence 5444444555556665 455433
No 374
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.27 E-value=0.13 Score=47.60 Aligned_cols=94 Identities=17% Similarity=0.170 Sum_probs=64.1
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCcCCHHhhhc----cCCEE
Q 021218 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS----GSDLV 182 (316)
Q Consensus 108 l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~~~e~i~----~ADIV 182 (316)
-+| ++|.|+|.|.+|...++.++.. |.+|+...+ +++..+.+++.|.... +....+..+.+. ..|+|
T Consensus 165 ~~g-~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~~~-~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~v 236 (340)
T 3s2e_A 165 RPG-QWVVISGIGGLGHVAVQYARAM------GLRVAAVDI-DDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGV 236 (340)
T ss_dssp CTT-SEEEEECCSTTHHHHHHHHHHT------TCEEEEEES-CHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEE
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHC------CCeEEEEeC-CHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEE
Confidence 367 9999999999999999999998 988665544 4566778888885310 111123333333 57999
Q ss_pred EEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 183 LLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 183 iLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
+.++... +.++...+.++++-.++.++
T Consensus 237 id~~g~~---~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 237 LVTAVSP---KAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp EESSCCH---HHHHHHHHHEEEEEEEEECS
T ss_pred EEeCCCH---HHHHHHHHHhccCCEEEEeC
Confidence 9887643 34556666777777666553
No 375
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.26 E-value=0.085 Score=49.59 Aligned_cols=94 Identities=12% Similarity=0.099 Sum_probs=61.3
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCcCCHHhhhc-----cCCEE
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-----GSDLV 182 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~~~e~i~-----~ADIV 182 (316)
+| ++|.|+|.|.+|...++.++.. |...+++.+.+++..+.+++.|.... +....+..+.+. ..|+|
T Consensus 190 ~g-~~VlV~GaG~vG~~a~qlak~~------Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~v 262 (371)
T 1f8f_A 190 PA-SSFVTWGAGAVGLSALLAAKVC------GASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFA 262 (371)
T ss_dssp TT-CEEEEESCSHHHHHHHHHHHHH------TCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEE
Confidence 57 8999999999999999999988 87433444444556777888775310 111123333332 47999
Q ss_pred EEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 183 LLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 183 iLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
+-++... ..+++..+.++++-.++.++
T Consensus 263 id~~g~~---~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 263 LESTGSP---EILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp EECSCCH---HHHHHHHHTEEEEEEEEECC
T ss_pred EECCCCH---HHHHHHHHHHhcCCEEEEeC
Confidence 9888753 34556666777776666543
No 376
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=94.16 E-value=0.097 Score=49.44 Aligned_cols=66 Identities=20% Similarity=0.197 Sum_probs=48.7
Q ss_pred cccCCCCEEEEEccc---chHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEE
Q 021218 106 DAFNGINQIGVIGWG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLV 182 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G---~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIV 182 (316)
..|+| .||++||-| ++..|++..+... |+++.+...+.-.. + ..+.|. ..+++|+++++|+|
T Consensus 143 g~l~g-lkva~vGD~~~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~-~-~~~~g~------~~d~~eav~~aDvv 207 (304)
T 3r7f_A 143 NTFKG-LTVSIHGDIKHSRVARSNAEVLTRL------GARVLFSGPSEWQD-E-ENTFGT------YVSMDEAVESSDVV 207 (304)
T ss_dssp SCCTT-CEEEEESCCTTCHHHHHHHHHHHHT------TCEEEEESCGGGSC-T-TCSSCE------ECCHHHHHHHCSEE
T ss_pred CCCCC-CEEEEEcCCCCcchHHHHHHHHHHc------CCEEEEECCCccCc-c-hhhcCc------cCCHHHHhCCCCEE
Confidence 46889 999999975 5999999999999 99887775432111 1 012332 35899999999999
Q ss_pred EEcc
Q 021218 183 LLLI 186 (316)
Q Consensus 183 iLav 186 (316)
..-.
T Consensus 208 yt~~ 211 (304)
T 3r7f_A 208 MLLR 211 (304)
T ss_dssp EECC
T ss_pred Eecc
Confidence 8854
No 377
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=94.07 E-value=0.31 Score=41.42 Aligned_cols=69 Identities=20% Similarity=0.164 Sum_probs=45.6
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec--CCCcCCHHhhhccCCEEEEcccC
Q 021218 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE--NGTLGDIYETISGSDLVLLLISD 188 (316)
Q Consensus 112 kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~--~~t~~~~~e~i~~ADIViLavp~ 188 (316)
|+|.|+|. |.+|..+++.|.+. |++|++..|+.++ .+.....++... |-+-.+. +.+.++|+||.+...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~-~~~~~~~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR------GHEVLAVVRDPQK-AADRLGATVATLVKEPLVLTE-ADLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCHHH-HHHHTCTTSEEEECCGGGCCH-HHHTTCSEEEECCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC------CCEEEEEEecccc-cccccCCCceEEecccccccH-hhcccCCEEEECCcc
Confidence 57999996 99999999999998 9998877775332 222112233211 1011112 678899999998854
No 378
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.07 E-value=0.14 Score=43.44 Aligned_cols=93 Identities=13% Similarity=0.082 Sum_probs=60.6
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCcCCHHhhh------ccCC
Q 021218 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (316)
Q Consensus 109 ~G~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~~~e~i------~~AD 180 (316)
+| +++.|+| .|.+|.++++.++.. |.+|+...++ ++..+.+++.|.... |....+..+.+ ...|
T Consensus 38 ~g-~~vlV~Ga~ggiG~~~~~~~~~~------G~~V~~~~~~-~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D 109 (198)
T 1pqw_A 38 PG-ERVLIHSATGGVGMAAVSIAKMI------GARIYTTAGS-DAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVD 109 (198)
T ss_dssp TT-CEEEETTTTSHHHHHHHHHHHHH------TCEEEEEESS-HHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEeeCCChHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCe
Confidence 57 9999999 699999999999998 8887666554 344455666664210 11111222222 2479
Q ss_pred EEEEcccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 181 IViLavp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
+|+-++.. +.+++..+.|+++..++.++.
T Consensus 110 ~vi~~~g~----~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 110 VVLNSLAG----EAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp EEEECCCT----HHHHHHHHTEEEEEEEEECSC
T ss_pred EEEECCch----HHHHHHHHHhccCCEEEEEcC
Confidence 99988753 356666777888777766553
No 379
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=94.06 E-value=0.045 Score=51.92 Aligned_cols=91 Identities=11% Similarity=0.068 Sum_probs=54.8
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhc-CCcEEEEEecCCc--ccHHHHHHCCceecCCCcCCH-HhhhccCCEEEEc
Q 021218 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAK-SDIVVKVGLRKGS--RSFAEARAAGFTEENGTLGDI-YETISGSDLVLLL 185 (316)
Q Consensus 111 ~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g-~G~~Vivg~r~~~--~s~~~A~~~G~~~~~~t~~~~-~e~i~~ADIViLa 185 (316)
|++|+|+| .|.+|..+.+.|.+. + ..++++...+..+ +... -.|... ...+. .+.++++|+|+.|
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~----~~p~~elv~i~s~~~~G~~~~---~~~~~i---~~~~~~~~~~~~vDvVf~a 72 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQER----EFPVDELFLLASERSEGKTYR---FNGKTV---RVQNVEEFDWSQVHIALFS 72 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT----TCCEEEEEEEECTTTTTCEEE---ETTEEE---EEEEGGGCCGGGCSEEEEC
T ss_pred ccEEEEECCCCHHHHHHHHHHhcC----CCCCEEEEEEECCCCCCCcee---ecCcee---EEecCChHHhcCCCEEEEC
Confidence 37999999 999999999988764 1 0235444443211 1000 001100 01111 1244689999999
Q ss_pred ccCchHHHHHHHHHhcCCCCcEEEEeCCc
Q 021218 186 ISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (316)
Q Consensus 186 vp~~~~~~vi~ei~~~mk~gaiLid~aGv 214 (316)
+|.....+..+... +.|..++|.++-
T Consensus 73 ~g~~~s~~~a~~~~---~~G~~vId~s~~ 98 (336)
T 2r00_A 73 AGGELSAKWAPIAA---EAGVVVIDNTSH 98 (336)
T ss_dssp SCHHHHHHHHHHHH---HTTCEEEECSST
T ss_pred CCchHHHHHHHHHH---HcCCEEEEcCCc
Confidence 99887777776554 458888887653
No 380
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=94.05 E-value=0.11 Score=50.52 Aligned_cols=88 Identities=15% Similarity=0.179 Sum_probs=55.2
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCC-cEEE-EE-ecCC-cccHHHH-------------HHCCceecCCCcCCHH
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSD-IVVK-VG-LRKG-SRSFAEA-------------RAAGFTEENGTLGDIY 173 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G-~~Vi-vg-~r~~-~~s~~~A-------------~~~G~~~~~~t~~~~~ 173 (316)
++||||| .|..|..+.+.|... . .++. +. .++. .+..... .+.-+.+ . +.+
T Consensus 20 ~kVaIvGAtG~vG~ell~lL~~h------p~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~----~-~~~ 88 (381)
T 3hsk_A 20 KKAGVLGATGSVGQRFILLLSKH------PEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQE----C-KPE 88 (381)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC------SSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEE----S-SSC
T ss_pred cEEEEECCCChHHHHHHHHHHcC------CCceEEEeeccccccCCCHHHhcccccccccccccccceEEe----C-chh
Confidence 5899999 799999999977664 3 3543 22 2221 1222211 1111111 1 122
Q ss_pred hhhccCCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 174 ETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 174 e~i~~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
+.++++|+||+|+|.....++.+++.+ .|..++|.++
T Consensus 89 ~~~~~~Dvvf~alp~~~s~~~~~~~~~---~G~~VIDlSa 125 (381)
T 3hsk_A 89 GNFLECDVVFSGLDADVAGDIEKSFVE---AGLAVVSNAK 125 (381)
T ss_dssp TTGGGCSEEEECCCHHHHHHHHHHHHH---TTCEEEECCS
T ss_pred hhcccCCEEEECCChhHHHHHHHHHHh---CCCEEEEcCC
Confidence 146799999999998888888777643 5888888765
No 381
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=94.05 E-value=0.14 Score=47.81 Aligned_cols=91 Identities=19% Similarity=0.157 Sum_probs=63.5
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhh------ccCCE
Q 021218 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI------SGSDL 181 (316)
Q Consensus 109 ~G~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i------~~ADI 181 (316)
+| ++|.|+| .|.+|...++.++.. |.+|+.. ++ ++..+.+++.|...-+ ...+..+.+ ...|+
T Consensus 150 ~g-~~VlV~Ga~g~iG~~~~q~a~~~------Ga~Vi~~-~~-~~~~~~~~~lGa~~i~-~~~~~~~~~~~~~~~~g~D~ 219 (343)
T 3gaz_A 150 DG-QTVLIQGGGGGVGHVAIQIALAR------GARVFAT-AR-GSDLEYVRDLGATPID-ASREPEDYAAEHTAGQGFDL 219 (343)
T ss_dssp TT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEE-EC-HHHHHHHHHHTSEEEE-TTSCHHHHHHHHHTTSCEEE
T ss_pred CC-CEEEEecCCCHHHHHHHHHHHHC------CCEEEEE-eC-HHHHHHHHHcCCCEec-cCCCHHHHHHHHhcCCCceE
Confidence 57 9999999 799999999999998 9887665 43 4556778887764312 122333333 25899
Q ss_pred EEEcccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 182 ViLavp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
|+-++.. +.++...+.++++-.++.+.+
T Consensus 220 vid~~g~----~~~~~~~~~l~~~G~iv~~g~ 247 (343)
T 3gaz_A 220 VYDTLGG----PVLDASFSAVKRFGHVVSCLG 247 (343)
T ss_dssp EEESSCT----HHHHHHHHHEEEEEEEEESCC
T ss_pred EEECCCc----HHHHHHHHHHhcCCeEEEEcc
Confidence 9999874 345555667777777666554
No 382
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.04 E-value=0.021 Score=49.03 Aligned_cols=71 Identities=18% Similarity=0.258 Sum_probs=47.5
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCC---HHhhhccCCEEEEcc
Q 021218 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLI 186 (316)
Q Consensus 111 ~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~---~~e~i~~ADIViLav 186 (316)
||+|.|+| .|.+|..+++.|.+. |++|++..|+.++.... ..++........+ ..++++++|+||.+.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 75 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR------GFEVTAVVRHPEKIKIE--NEHLKVKKADVSSLDEVCEVCKGADAVISAF 75 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT------TCEEEEECSCGGGCCCC--CTTEEEECCCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC------CCEEEEEEcCcccchhc--cCceEEEEecCCCHHHHHHHhcCCCEEEEeC
Confidence 58999999 699999999999998 99888777764321111 0122111111223 456788999999988
Q ss_pred cCc
Q 021218 187 SDA 189 (316)
Q Consensus 187 p~~ 189 (316)
.+.
T Consensus 76 ~~~ 78 (227)
T 3dhn_A 76 NPG 78 (227)
T ss_dssp CC-
T ss_pred cCC
Confidence 664
No 383
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.00 E-value=0.18 Score=45.57 Aligned_cols=82 Identities=17% Similarity=0.146 Sum_probs=52.8
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCC-c----ccHHH---HHHCCceecCCCcCC---HHhhhcc
Q 021218 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-S----RSFAE---ARAAGFTEENGTLGD---IYETISG 178 (316)
Q Consensus 111 ~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~-~----~s~~~---A~~~G~~~~~~t~~~---~~e~i~~ 178 (316)
||+|.|+| .|.+|.++++.|.+. |++|++..|+. . ...+. ....|+........+ +.+++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~ 77 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSF------SHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQ 77 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHT------TCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTT
T ss_pred ccEEEEEcCCchhHHHHHHHHHhC------CCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcC
Confidence 37899999 599999999999998 88888777764 1 11111 123454221111233 5567889
Q ss_pred CCEEEEcccCc---hHHHHHHHH
Q 021218 179 SDLVLLLISDA---AQADNYEKI 198 (316)
Q Consensus 179 ADIViLavp~~---~~~~vi~ei 198 (316)
+|+||.+.... ....+++..
T Consensus 78 ~d~vi~~a~~~~~~~~~~l~~aa 100 (321)
T 3c1o_A 78 VDIVISALPFPMISSQIHIINAI 100 (321)
T ss_dssp CSEEEECCCGGGSGGGHHHHHHH
T ss_pred CCEEEECCCccchhhHHHHHHHH
Confidence 99999988753 233455543
No 384
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=93.99 E-value=0.19 Score=44.93 Aligned_cols=72 Identities=18% Similarity=0.193 Sum_probs=48.4
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCC-c-----ccHH---HHHHCCceecCCCcCC---HHhhhcc
Q 021218 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-S-----RSFA---EARAAGFTEENGTLGD---IYETISG 178 (316)
Q Consensus 112 kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~-~-----~s~~---~A~~~G~~~~~~t~~~---~~e~i~~ 178 (316)
|+|.|+|. |.+|.++++.|.+. |++|++..|+. . ...+ .....|+........+ +.+++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~ 76 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKA------GNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQ 76 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHH------TCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTT
T ss_pred cEEEEECCCchHHHHHHHHHHhC------CCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhC
Confidence 88999995 99999999999998 88888777764 1 1111 1123454221111223 4567889
Q ss_pred CCEEEEcccCc
Q 021218 179 SDLVLLLISDA 189 (316)
Q Consensus 179 ADIViLavp~~ 189 (316)
+|+||.+....
T Consensus 77 ~d~vi~~a~~~ 87 (307)
T 2gas_A 77 VDIVICAAGRL 87 (307)
T ss_dssp CSEEEECSSSS
T ss_pred CCEEEECCccc
Confidence 99999988753
No 385
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=93.97 E-value=0.067 Score=45.87 Aligned_cols=69 Identities=16% Similarity=0.196 Sum_probs=47.1
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCC----HHhhhccCCEEEEcc
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD----IYETISGSDLVLLLI 186 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~----~~e~i~~ADIViLav 186 (316)
|+|.|+| .|.+|.++++.|.+. |++|++..|+.++..+. .++........+ ..+++++.|+||.+.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~a 71 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT------DYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINVS 71 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS------SCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEECC
T ss_pred CeEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHcCCCEEEECC
Confidence 5899999 899999999999998 99988877764321111 222111111233 456788999999988
Q ss_pred cCc
Q 021218 187 SDA 189 (316)
Q Consensus 187 p~~ 189 (316)
...
T Consensus 72 g~~ 74 (219)
T 3dqp_A 72 GSG 74 (219)
T ss_dssp CCT
T ss_pred cCC
Confidence 654
No 386
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=93.96 E-value=0.13 Score=49.39 Aligned_cols=73 Identities=14% Similarity=0.172 Sum_probs=51.9
Q ss_pred cccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCC----cccHHH----HHHCCceecCCCcCCHHhhh
Q 021218 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAGFTEENGTLGDIYETI 176 (316)
Q Consensus 106 ~~l~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~----~~s~~~----A~~~G~~~~~~t~~~~~e~i 176 (316)
..|+| .||++||- +++..|++..+... |+++.+...++ +...+. |++.|.... ...+++|++
T Consensus 175 G~l~g-lkva~vGD~~nva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~--~~~d~~eav 245 (340)
T 4ep1_A 175 NTFKG-IKLAYVGDGNNVCHSLLLASAKV------GMHMTVATPVGYRPNEEIVKKALAIAKETGAEIE--ILHNPELAV 245 (340)
T ss_dssp SCCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEE--EESCHHHHH
T ss_pred CCCCC-CEEEEECCCchhHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEE--EECCHHHHh
Confidence 45889 99999995 58999999999998 99887775442 122222 335562210 146899999
Q ss_pred ccCCEEEEccc
Q 021218 177 SGSDLVLLLIS 187 (316)
Q Consensus 177 ~~ADIViLavp 187 (316)
+++|+|..-+=
T Consensus 246 ~~aDVvyt~~w 256 (340)
T 4ep1_A 246 NEADFIYTDVW 256 (340)
T ss_dssp TTCSEEEECCC
T ss_pred CCCCEEEecCc
Confidence 99999988653
No 387
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=93.93 E-value=0.12 Score=49.92 Aligned_cols=71 Identities=15% Similarity=0.162 Sum_probs=53.1
Q ss_pred cccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecCC----cccHH----HHHHCC--ceecCCCcCCHH
Q 021218 106 DAFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIY 173 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G--~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~----~~s~~----~A~~~G--~~~~~~t~~~~~ 173 (316)
..|+| .+|++||-| +++.|++..+... |++|.+...+. +...+ .+++.| +.. ..+++
T Consensus 172 g~l~g-l~va~vGD~~~rva~Sl~~~~~~l------G~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~----~~d~~ 240 (359)
T 2w37_A 172 GKLQG-LTLTFMGDGRNNVANSLLVTGAIL------GVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVI----TDDLD 240 (359)
T ss_dssp SCCTT-CEEEEESCTTSHHHHHHHHHHHHH------TCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEE----ESCHH
T ss_pred CCcCC-eEEEEECCCccchHHHHHHHHHHc------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EeCHH
Confidence 56889 999999986 9999999999999 99987775432 11222 233556 332 46899
Q ss_pred hhhccCCEEEEccc
Q 021218 174 ETISGSDLVLLLIS 187 (316)
Q Consensus 174 e~i~~ADIViLavp 187 (316)
|+++++|+|..-+=
T Consensus 241 eav~~aDvvytd~w 254 (359)
T 2w37_A 241 EGLKGSNVVYTDVW 254 (359)
T ss_dssp HHHTTCSEEEECCS
T ss_pred HHhcCCCEEEEccc
Confidence 99999999998554
No 388
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.89 E-value=0.13 Score=50.85 Aligned_cols=95 Identities=17% Similarity=0.261 Sum_probs=68.8
Q ss_pred cccCCCCEEEEEccc----------chHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH-C-CceecCCCcCCHH
Q 021218 106 DAFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-A-GFTEENGTLGDIY 173 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G----------~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~-~-G~~~~~~t~~~~~ 173 (316)
..++| ++|+|.|+- +-...+++.|.+. |.+|.+++..- .+.+++ . ++.. ..+.+
T Consensus 318 ~~~~~-~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~------g~~v~~~DP~~---~~~~~~~~~~~~~----~~~~~ 383 (446)
T 4a7p_A 318 GDVRG-KTVGILGLTFKPNTDDMRDAPSLSIIAALQDA------GATVKAYDPEG---VEQASKMLTDVEF----VENPY 383 (446)
T ss_dssp SCCTT-CEEEEECCSSSTTSCCCTTCSHHHHHHHHHHT------SCEEEEECSSC---HHHHGGGCSSCCB----CSCHH
T ss_pred ccCCC-CEEEEEEEEeCCCCcccccChHHHHHHHHHHC------CCEEEEECCCC---CHhHHHhcCCceE----ecChh
Confidence 35789 999999987 6678889999988 99887766542 223322 2 3331 45788
Q ss_pred hhhccCCEEEEcccCchHHH-HHHHHHhcCCCCcEEEEeCCch
Q 021218 174 ETISGSDLVLLLISDAAQAD-NYEKIFSCMKPNSILGLSHGFL 215 (316)
Q Consensus 174 e~i~~ADIViLavp~~~~~~-vi~ei~~~mk~gaiLid~aGv~ 215 (316)
++++++|.|++++.=.+..+ -++.+.+.|+. .+|+|..++.
T Consensus 384 ~~~~~ad~vvi~t~~~~f~~~d~~~~~~~~~~-~~i~D~r~~~ 425 (446)
T 4a7p_A 384 AAADGADALVIVTEWDAFRALDLTRIKNSLKS-PVLVDLRNIY 425 (446)
T ss_dssp HHHTTBSEEEECSCCTTTTSCCHHHHHTTBSS-CBEECSSCCS
T ss_pred HHhcCCCEEEEeeCCHHhhcCCHHHHHHhcCC-CEEEECCCCC
Confidence 99999999999998777654 34567777754 5788887763
No 389
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.86 E-value=0.2 Score=49.23 Aligned_cols=94 Identities=14% Similarity=0.190 Sum_probs=65.6
Q ss_pred cccCCCCEEEEEccc----------chHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHH-HCC--ceecCCCcCCH
Q 021218 106 DAFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAG--FTEENGTLGDI 172 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G----------~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~-~~G--~~~~~~t~~~~ 172 (316)
..++| ++|+|.|+- +-...+++.|.+. |.+|.+++..-. +.++ ..| +.. ..+.
T Consensus 314 ~~~~~-~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~------g~~v~~~DP~~~---~~~~~~~~~~~~~----~~~~ 379 (450)
T 3gg2_A 314 GNVQG-RCVAIWGLSFKPGTDDMREAPSLVLIEKLLEV------GCRVRVYDPVAM---KEAQKRLGDKVEY----TTDM 379 (450)
T ss_dssp TCCTT-CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHT------TCEEEEECSSCH---HHHHHHHGGGSEE----CSSH
T ss_pred ccCCC-CEEEEEeeeeCCCCcccccChHHHHHHHHHHC------CCEEEEECCCCc---HHHHHhcCcccee----cCCH
Confidence 45789 999999973 3356778888877 988877665432 2222 233 331 3578
Q ss_pred HhhhccCCEEEEcccCchHHH-HHHHHHhcCCCCcEEEEeCCc
Q 021218 173 YETISGSDLVLLLISDAAQAD-NYEKIFSCMKPNSILGLSHGF 214 (316)
Q Consensus 173 ~e~i~~ADIViLavp~~~~~~-vi~ei~~~mk~gaiLid~aGv 214 (316)
+++++++|.|++++.=.+..+ -++++.+.|+ +.+|+|..++
T Consensus 380 ~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~-~~~i~D~r~~ 421 (450)
T 3gg2_A 380 YDAVRGAEALFHVTEWKEFRMPDWSALSQAMA-ASLVIDGRNV 421 (450)
T ss_dssp HHHTTTCSCEEECSCCGGGSSCCHHHHHHHSS-SCEEEESSCC
T ss_pred HHHhcCCCEEEEccCCHHHhhcCHHHHHHhcC-CCEEEECCCC
Confidence 899999999999998777654 2456666675 5688898775
No 390
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=93.84 E-value=0.092 Score=49.63 Aligned_cols=73 Identities=16% Similarity=0.134 Sum_probs=54.6
Q ss_pred cccCCCCEEEEEccc---chHHHHHHHHHhhhhhhcCCcEEEEEecCC----cccHHHHHHCCceecCCCcCCHHhhhcc
Q 021218 106 DAFNGINQIGVIGWG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAEARAAGFTEENGTLGDIYETISG 178 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G---~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~----~~s~~~A~~~G~~~~~~t~~~~~e~i~~ 178 (316)
..|+| .+|++||-| ++..|++..+... |+++.+...++ +...+.+++.|.... ...+++|++++
T Consensus 151 g~l~g-l~va~vGD~~~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~--~~~d~~eav~~ 221 (308)
T 1ml4_A 151 GRIDG-LKIGLLGDLKYGRTVHSLAEALTFY------DVELYLISPELLRMPRHIVEELREKGMKVV--ETTTLEDVIGK 221 (308)
T ss_dssp SCSSS-EEEEEESCTTTCHHHHHHHHHGGGS------CEEEEEECCGGGCCCHHHHHHHHHTTCCEE--EESCTHHHHTT
T ss_pred CCCCC-eEEEEeCCCCcCchHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHcCCeEE--EEcCHHHHhcC
Confidence 56788 999999974 8999999999998 99887775432 223455666674311 14689999999
Q ss_pred CCEEEEccc
Q 021218 179 SDLVLLLIS 187 (316)
Q Consensus 179 ADIViLavp 187 (316)
+|+|..-.=
T Consensus 222 aDvvyt~~~ 230 (308)
T 1ml4_A 222 LDVLYVTRI 230 (308)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCc
Confidence 999998663
No 391
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=93.83 E-value=0.25 Score=46.38 Aligned_cols=91 Identities=11% Similarity=0.010 Sum_probs=59.6
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC----Cc---eecCCCcCCHHhh-hccC
Q 021218 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GF---TEENGTLGDIYET-ISGS 179 (316)
Q Consensus 108 l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~----G~---~~~~~t~~~~~e~-i~~A 179 (316)
-+| ++|..||+|..|.+.....+.. |.+ +++.+.++...+.|++. |. ... ..+..+. -...
T Consensus 121 ~~g-~rVLDIGcG~G~~ta~~lA~~~------ga~-V~gIDis~~~l~~Ar~~~~~~gl~~v~~v---~gDa~~l~d~~F 189 (298)
T 3fpf_A 121 RRG-ERAVFIGGGPLPLTGILLSHVY------GMR-VNVVEIEPDIAELSRKVIEGLGVDGVNVI---TGDETVIDGLEF 189 (298)
T ss_dssp CTT-CEEEEECCCSSCHHHHHHHHTT------CCE-EEEEESSHHHHHHHHHHHHHHTCCSEEEE---ESCGGGGGGCCC
T ss_pred CCc-CEEEEECCCccHHHHHHHHHcc------CCE-EEEEECCHHHHHHHHHHHHhcCCCCeEEE---ECchhhCCCCCc
Confidence 357 9999999999765544333434 666 45666766666666543 43 110 1233332 2467
Q ss_pred CEEEEcccCchHHHHHHHHHhcCCCCcEEE
Q 021218 180 DLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (316)
Q Consensus 180 DIViLavp~~~~~~vi~ei~~~mk~gaiLi 209 (316)
|+|++..-.....++++++...||||..|+
T Consensus 190 DvV~~~a~~~d~~~~l~el~r~LkPGG~Lv 219 (298)
T 3fpf_A 190 DVLMVAALAEPKRRVFRNIHRYVDTETRII 219 (298)
T ss_dssp SEEEECTTCSCHHHHHHHHHHHCCTTCEEE
T ss_pred CEEEECCCccCHHHHHHHHHHHcCCCcEEE
Confidence 999987765555679999999999998765
No 392
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=93.76 E-value=0.16 Score=48.37 Aligned_cols=70 Identities=16% Similarity=0.171 Sum_probs=50.1
Q ss_pred cccCCCCEEEEEccc-chHHHHHHHHHhhhhhhcCCcEEEEEecCCc----ccHHH----HHHCC--ceecCCCcCCHHh
Q 021218 106 DAFNGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS----RSFAE----ARAAG--FTEENGTLGDIYE 174 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G-~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~----~s~~~----A~~~G--~~~~~~t~~~~~e 174 (316)
..|+| .+|++||-| ++..|++..+... |++|.+...+.- ...+. +++.| +.. ..+++|
T Consensus 151 g~l~g-l~va~vGD~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~----~~d~~e 219 (321)
T 1oth_A 151 SSLKG-LTLSWIGDGNNILHSIMMSAAKF------GMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLL----TNDPLE 219 (321)
T ss_dssp SCCTT-CEEEEESCSSHHHHHHHTTTGGG------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEE----ESCHHH
T ss_pred CCcCC-cEEEEECCchhhHHHHHHHHHHc------CCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EECHHH
Confidence 56889 999999986 4888888888777 998877765431 11222 22345 332 568999
Q ss_pred hhccCCEEEEcc
Q 021218 175 TISGSDLVLLLI 186 (316)
Q Consensus 175 ~i~~ADIViLav 186 (316)
+++++|+|..-+
T Consensus 220 av~~aDvvy~d~ 231 (321)
T 1oth_A 220 AAHGGNVLITDT 231 (321)
T ss_dssp HHTTCSEEEECC
T ss_pred HhccCCEEEEec
Confidence 999999999955
No 393
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=93.71 E-value=0.17 Score=48.30 Aligned_cols=70 Identities=14% Similarity=0.078 Sum_probs=50.4
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecCCcc------cHHHH----HH--CCceecCCCcCCH
Q 021218 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR------SFAEA----RA--AGFTEENGTLGDI 172 (316)
Q Consensus 107 ~l~G~kkIGIIG~G--~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~------s~~~A----~~--~G~~~~~~t~~~~ 172 (316)
.|+| .+|++||-+ ++..|++..+... |+++.+...++-. ..+.+ .+ .|...+ ...++
T Consensus 158 ~l~g-l~va~vGD~~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~--~~~d~ 228 (328)
T 3grf_A 158 GFKG-IKFAYCGDSMNNVTYDLMRGCALL------GMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIK--IFHDC 228 (328)
T ss_dssp TGGG-CCEEEESCCSSHHHHHHHHHHHHH------TCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEE--EESSH
T ss_pred ccCC-cEEEEeCCCCcchHHHHHHHHHHc------CCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEE--EEcCH
Confidence 6889 999999975 8999999999998 9988777554321 22223 23 453211 15689
Q ss_pred HhhhccCCEEEEc
Q 021218 173 YETISGSDLVLLL 185 (316)
Q Consensus 173 ~e~i~~ADIViLa 185 (316)
+|+++++|+|..-
T Consensus 229 ~eav~~aDvvytd 241 (328)
T 3grf_A 229 KKGCEGVDVVYTD 241 (328)
T ss_dssp HHHHTTCSEEEEC
T ss_pred HHHhcCCCEEEec
Confidence 9999999999864
No 394
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=93.71 E-value=0.32 Score=43.79 Aligned_cols=76 Identities=21% Similarity=0.153 Sum_probs=48.7
Q ss_pred cccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH------CCce---ecCC-CcCCHHh
Q 021218 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA------AGFT---EENG-TLGDIYE 174 (316)
Q Consensus 106 ~~l~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~------~G~~---~~~~-t~~~~~e 174 (316)
..++| |+|.|.|. |-+|..+++.|.+. |++|++..|+..+....... .++. ..|- ...+..+
T Consensus 7 ~~~~~-~~vlVTGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~ 79 (342)
T 1y1p_A 7 VLPEG-SLVLVTGANGFVASHVVEQLLEH------GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDE 79 (342)
T ss_dssp SSCTT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTT
T ss_pred cCCCC-CEEEEECCccHHHHHHHHHHHHC------CCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHH
Confidence 34678 99999996 99999999999998 99888777653321111111 1221 1110 1123456
Q ss_pred hhccCCEEEEcccC
Q 021218 175 TISGSDLVLLLISD 188 (316)
Q Consensus 175 ~i~~ADIViLavp~ 188 (316)
++++.|+||-+...
T Consensus 80 ~~~~~d~vih~A~~ 93 (342)
T 1y1p_A 80 VIKGAAGVAHIASV 93 (342)
T ss_dssp TTTTCSEEEECCCC
T ss_pred HHcCCCEEEEeCCC
Confidence 67789999987643
No 395
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=93.68 E-value=0.037 Score=52.59 Aligned_cols=67 Identities=22% Similarity=0.189 Sum_probs=43.4
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCc-ccHHHHHHCCceecCCCcCC---HHhhhccCCEE
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGD---IYETISGSDLV 182 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~t~~~---~~e~i~~ADIV 182 (316)
.+.| ++|+|||.|.+|..+++.+++. |+++++.+.... .....+ ..+... ...| +.++++++|+|
T Consensus 9 ~~~~-~~IlIlG~G~lg~~la~aa~~l------G~~viv~d~~~~~p~~~~a--d~~~~~--~~~d~~~l~~~~~~~dvi 77 (377)
T 3orq_A 9 LKFG-ATIGIIGGGQLGKMMAQSAQKM------GYKVVVLDPSEDCPCRYVA--HEFIQA--KYDDEKALNQLGQKCDVI 77 (377)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCTTCTTGGGS--SEEEEC--CTTCHHHHHHHHHHCSEE
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEECCCCChhhhhC--CEEEEC--CCCCHHHHHHHHHhCCcc
Confidence 3467 9999999999999999999999 998877654322 111111 112110 1122 45567789988
Q ss_pred EE
Q 021218 183 LL 184 (316)
Q Consensus 183 iL 184 (316)
+.
T Consensus 78 ~~ 79 (377)
T 3orq_A 78 TY 79 (377)
T ss_dssp EE
T ss_pred ee
Confidence 65
No 396
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=93.64 E-value=0.16 Score=49.15 Aligned_cols=72 Identities=13% Similarity=0.030 Sum_probs=51.2
Q ss_pred cccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecCC------cccHH----HHHHCCceecCCCcCCHH
Q 021218 106 DAFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG------SRSFA----EARAAGFTEENGTLGDIY 173 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G--~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~------~~s~~----~A~~~G~~~~~~t~~~~~ 173 (316)
..|+| .||++||-+ +++.|++..+... |+++.+...+. +...+ .+.+.|.... ...+++
T Consensus 176 G~l~g-lkva~vGD~~nnva~Sl~~~~~~l------G~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~--~~~d~~ 246 (365)
T 4amu_A 176 GNLKN-KKIVFIGDYKNNVGVSTMIGAAFN------GMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLR--FSTDKI 246 (365)
T ss_dssp SSCTT-CEEEEESSTTSHHHHHHHHHHHHT------TCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEE--EESCHH
T ss_pred CCCCC-CEEEEECCCCcchHHHHHHHHHHc------CCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEE--EECCHH
Confidence 34889 999999987 7899999999888 99887775432 11112 2344553211 146899
Q ss_pred hhhccCCEEEEcc
Q 021218 174 ETISGSDLVLLLI 186 (316)
Q Consensus 174 e~i~~ADIViLav 186 (316)
|++++||+|..-+
T Consensus 247 eav~~aDVVytd~ 259 (365)
T 4amu_A 247 LAAQDADVIYTDV 259 (365)
T ss_dssp HHTTTCSEEEECC
T ss_pred HHhcCCCEEEecc
Confidence 9999999999843
No 397
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.62 E-value=0.27 Score=45.54 Aligned_cols=93 Identities=14% Similarity=0.182 Sum_probs=62.0
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCcCCHHhhh----ccCCEEE
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI----SGSDLVL 183 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~~~e~i----~~ADIVi 183 (316)
+| ++|.|+|.|.+|...++.++.. |.+|+...+ +++..+.+++.|.... +....+..+.+ ...|+|+
T Consensus 164 ~g-~~VlV~GaG~vG~~~~~~a~~~------Ga~Vi~~~~-~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vi 235 (339)
T 1rjw_A 164 PG-EWVAIYGIGGLGHVAVQYAKAM------GLNVVAVDI-GDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAV 235 (339)
T ss_dssp TT-CEEEEECCSTTHHHHHHHHHHT------TCEEEEECS-CHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEeC-CHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEE
Confidence 57 8999999999999999999998 987665544 4555677778885310 11112333322 4689999
Q ss_pred EcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 184 LLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 184 Lavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
-++.... .+++..+.++++..++.++
T Consensus 236 d~~g~~~---~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 236 VTAVSKP---AFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp ESSCCHH---HHHHHHHHEEEEEEEEECC
T ss_pred ECCCCHH---HHHHHHHHhhcCCEEEEec
Confidence 9887532 4555566677776665543
No 398
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.53 E-value=0.083 Score=48.64 Aligned_cols=72 Identities=19% Similarity=0.218 Sum_probs=49.5
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHH------HHCCceecCCCcCC---HHhhhc--cC
Q 021218 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA------RAAGFTEENGTLGD---IYETIS--GS 179 (316)
Q Consensus 112 kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A------~~~G~~~~~~t~~~---~~e~i~--~A 179 (316)
|+|.|+|. |.+|.++++.|.+. |++|++..|+.....+.+ ...++....+.+.+ +.++++ ++
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 84 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDA------HRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEI 84 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHT------TCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTC
T ss_pred CeEEEECCCcHHHHHHHHHHHHC------CCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCC
Confidence 78999996 99999999999998 888888877652222111 23444321122333 456777 99
Q ss_pred CEEEEcccCc
Q 021218 180 DLVLLLISDA 189 (316)
Q Consensus 180 DIViLavp~~ 189 (316)
|+||.+....
T Consensus 85 d~Vi~~a~~~ 94 (346)
T 3i6i_A 85 DIVVSTVGGE 94 (346)
T ss_dssp CEEEECCCGG
T ss_pred CEEEECCchh
Confidence 9999998764
No 399
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=93.52 E-value=0.22 Score=47.94 Aligned_cols=98 Identities=17% Similarity=0.121 Sum_probs=54.9
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEec-C-CcccHHHHHHC----C------------ceecCC-
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR-K-GSRSFAEARAA----G------------FTEENG- 167 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r-~-~~~s~~~A~~~----G------------~~~~~~- 167 (316)
....|.+|||+|+|.+|..+.+.|.+. .+++|+...+ . +........+. | +.. ++
T Consensus 13 ~~~~~ikVgI~G~G~iGr~llR~l~~~-----p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v-~g~ 86 (354)
T 3cps_A 13 NLYFQGTLGINGFGRIGRLVLRACMER-----NDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCI-NGK 86 (354)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHTC-----SSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEE-TTE
T ss_pred CcCcceEEEEECCCHHHHHHHHHHHcC-----CCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEE-CCe
Confidence 344557999999999999999998764 1466655544 2 11111111111 1 000 00
Q ss_pred -----CcCCHHhhh---ccCCEEEEcccCchHHHHHHHHHhcCCCCc--EEEEeCC
Q 021218 168 -----TLGDIYETI---SGSDLVLLLISDAAQADNYEKIFSCMKPNS--ILGLSHG 213 (316)
Q Consensus 168 -----t~~~~~e~i---~~ADIViLavp~~~~~~vi~ei~~~mk~ga--iLid~aG 213 (316)
...+++++- .++|+|+.|+|.....+... .+++.|+ +|++.++
T Consensus 87 ~i~v~~~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~---~~l~~GakkvVId~pa 139 (354)
T 3cps_A 87 VVKVFQAKDPAEIPWGASGAQIVCESTGVFTTEEKAS---LHLKGGAKKVIISAPP 139 (354)
T ss_dssp EEEEECCSCGGGCCHHHHTCCEEEECSSSCCSHHHHG---GGGTTTCSEEEESSCC
T ss_pred EEEEEecCChHHCCcccCCCCEEEECCCchhhHHHHH---HHHHcCCcEEEEeCCC
Confidence 011333331 47999999999887766554 3456677 7877654
No 400
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=93.49 E-value=0.027 Score=55.08 Aligned_cols=79 Identities=15% Similarity=0.064 Sum_probs=58.3
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCc---EEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEccc
Q 021218 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~---~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp 187 (316)
.++.|||. |..|..-++.++.. |. +|.+.+++. ...|-. + +.++++|+||-++.
T Consensus 215 ~kV~ViG~~G~vG~~A~~~a~~l------Ga~~~~V~v~D~~~-------~~~g~~--------~-~~i~~aDivIn~vl 272 (394)
T 2qrj_A 215 PTVLIIGALGRCGSGAIDLLHKV------GIPDANILKWDIKE-------TSRGGP--------F-DEIPQADIFINCIY 272 (394)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT------TCCGGGEEEECHHH-------HTTCSC--------C-THHHHSSEEEECCC
T ss_pred CeEEEEcCCCHHHHHHHHHHHhC------CCCcCceEEeeccc-------cccCCc--------h-hhHhhCCEEEECcC
Confidence 57899999 99999999999988 86 777665431 111322 1 34679999999999
Q ss_pred CchH-HHHHH-HHHhcC-CCCcEEEEeC
Q 021218 188 DAAQ-ADNYE-KIFSCM-KPNSILGLSH 212 (316)
Q Consensus 188 ~~~~-~~vi~-ei~~~m-k~gaiLid~a 212 (316)
-..- ..++. +..+.| |||++|+|++
T Consensus 273 ig~~aP~Lvt~e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 273 LSKPIAPFTNMEKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp CCSSCCCSCCHHHHCCTTCCCCEEEETT
T ss_pred cCCCCCcccCHHHHhcCcCCCeEEEEEe
Confidence 6332 23554 777889 9999999985
No 401
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=93.45 E-value=0.23 Score=46.75 Aligned_cols=71 Identities=14% Similarity=0.046 Sum_probs=51.7
Q ss_pred cccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcc-cHHHHHHCCceecCCCcCCHHhhhccCCEEE
Q 021218 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR-SFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (316)
Q Consensus 106 ~~l~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~-s~~~A~~~G~~~~~~t~~~~~e~i~~ADIVi 183 (316)
..|+| .+|++||- +++..|++..+... |+++.+...+.-. ..+.....++.. ..+++|+++++|+|.
T Consensus 150 g~l~g-l~ia~vGD~~rva~Sl~~~~~~~------g~~v~~~~P~~~~~~~~~~~~~~~~~----~~d~~eav~~aDvvy 218 (301)
T 2ef0_A 150 GGLAG-LEVAWVGDGNNVLNSLLEVAPLA------GLKVRVATPKGYEPDPGLLKRANAFF----THDPKEAALGAHALY 218 (301)
T ss_dssp SCCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHTCEE----ESCHHHHHTTCSEEE
T ss_pred CCcCC-cEEEEECCCchhHHHHHHHHHHc------CCEEEEECCchhcCCHHHHhhceeEE----ECCHHHHhcCCCEEE
Confidence 56889 99999996 79999999999999 9998877654311 111111112442 468999999999999
Q ss_pred Eccc
Q 021218 184 LLIS 187 (316)
Q Consensus 184 Lavp 187 (316)
.-+=
T Consensus 219 ~~~~ 222 (301)
T 2ef0_A 219 TDVW 222 (301)
T ss_dssp ECCC
T ss_pred ecCc
Confidence 8554
No 402
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=93.44 E-value=0.21 Score=47.59 Aligned_cols=71 Identities=15% Similarity=0.220 Sum_probs=51.5
Q ss_pred cccCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCC----cccHHH----HHHCC--ceecCCCcCCHHh
Q 021218 106 DAFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAG--FTEENGTLGDIYE 174 (316)
Q Consensus 106 ~~l~G~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~----~~s~~~----A~~~G--~~~~~~t~~~~~e 174 (316)
..|+| .||++|| .+++..|++..+... |+++.+...++ +...+. +++.| +.. ..+++|
T Consensus 153 g~l~g-lkva~vGD~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~----~~d~~e 221 (323)
T 3gd5_A 153 GRLAG-LKLAYVGDGNNVAHSLLLGCAKV------GMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQI----LRDPFE 221 (323)
T ss_dssp SCCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEE----ESCHHH
T ss_pred CCCCC-CEEEEECCCCcHHHHHHHHHHHc------CCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEE----ECCHHH
Confidence 45889 9999999 468999999999888 99887775432 122222 23445 332 568999
Q ss_pred hhccCCEEEEccc
Q 021218 175 TISGSDLVLLLIS 187 (316)
Q Consensus 175 ~i~~ADIViLavp 187 (316)
+++++|+|..-+=
T Consensus 222 av~~aDvvyt~~w 234 (323)
T 3gd5_A 222 AARGAHILYTDVW 234 (323)
T ss_dssp HHTTCSEEEECCC
T ss_pred HhcCCCEEEEece
Confidence 9999999988753
No 403
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=93.43 E-value=0.17 Score=48.44 Aligned_cols=86 Identities=21% Similarity=0.243 Sum_probs=53.9
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCc---EEEEEecCCc--ccHHHHHHCC--ceecCCCcCCHHhhhccCCEEE
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKGS--RSFAEARAAG--FTEENGTLGDIYETISGSDLVL 183 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~---~Vivg~r~~~--~s~~~A~~~G--~~~~~~t~~~~~e~i~~ADIVi 183 (316)
++|+||| .|..|..+.+.|... .+ ++.......+ +... -.| ...++ . + .+.++++|+|+
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h------~fp~~el~~~~s~~~aG~~~~---~~~~~~~~~~--~-~-~~~~~~~Dvvf 68 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDER------DFPASAVRFFASARSQGRKLA---FRGQEIEVED--A-E-TADPSGLDIAL 68 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT------TCCEEEEEEEECTTTSSCEEE---ETTEEEEEEE--T-T-TSCCTTCSEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCceEEEEEECcccCCCcee---ecCCceEEEe--C-C-HHHhccCCEEE
Confidence 7899999 899999999987764 32 3333322211 1110 001 11100 1 1 23467999999
Q ss_pred EcccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 184 LLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 184 Lavp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
+|+|.....++.+++.+ .|..++|.++
T Consensus 69 ~a~~~~~s~~~a~~~~~---~G~~vID~Sa 95 (344)
T 3tz6_A 69 FSAGSAMSKVQAPRFAA---AGVTVIDNSS 95 (344)
T ss_dssp ECSCHHHHHHHHHHHHH---TTCEEEECSS
T ss_pred ECCChHHHHHHHHHHHh---CCCEEEECCC
Confidence 99998887777776643 5888888765
No 404
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=93.41 E-value=0.52 Score=39.80 Aligned_cols=93 Identities=14% Similarity=0.043 Sum_probs=58.2
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC----Cc---eecCCCcCCHHh---hhc
Q 021218 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GF---TEENGTLGDIYE---TIS 177 (316)
Q Consensus 108 l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~----G~---~~~~~t~~~~~e---~i~ 177 (316)
-+| .+|--||+|. |. ++..+.+. +.+.+ +++.+.++...+.+++. |. ... ..+..+ ...
T Consensus 39 ~~~-~~vLDiG~G~-G~-~~~~la~~----~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~v~~~---~~d~~~~~~~~~ 107 (204)
T 3e05_A 39 QDD-LVMWDIGAGS-AS-VSIEASNL----MPNGR-IFALERNPQYLGFIRDNLKKFVARNVTLV---EAFAPEGLDDLP 107 (204)
T ss_dssp CTT-CEEEEETCTT-CH-HHHHHHHH----CTTSE-EEEEECCHHHHHHHHHHHHHHTCTTEEEE---ECCTTTTCTTSC
T ss_pred CCC-CEEEEECCCC-CH-HHHHHHHH----CCCCE-EEEEeCCHHHHHHHHHHHHHhCCCcEEEE---eCChhhhhhcCC
Confidence 357 8999999997 43 44444444 11245 45666666555555442 22 110 122222 235
Q ss_pred cCCEEEEcccCchHHHHHHHHHhcCCCCcEEEEe
Q 021218 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 178 ~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~ 211 (316)
..|+|++..+.....++++++...+|||..++..
T Consensus 108 ~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 108 DPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp CCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEE
Confidence 7899999887777778999999999999877644
No 405
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=93.41 E-value=0.084 Score=49.59 Aligned_cols=72 Identities=13% Similarity=-0.014 Sum_probs=54.0
Q ss_pred cccCCCCEEEEEcc---cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEE
Q 021218 106 DAFNGINQIGVIGW---GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLV 182 (316)
Q Consensus 106 ~~l~G~kkIGIIG~---G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIV 182 (316)
..|+| .+|++||- +++..|++..+... |+++.+...+.-.... ..+.|+.. ..+++|+++++|+|
T Consensus 142 g~l~g-l~va~vGDl~~~rva~Sl~~~~~~~------g~~v~~~~P~~~~p~~-~~~~g~~~----~~d~~eav~~aDvv 209 (291)
T 3d6n_B 142 GEVKD-LRVLYVGDIKHSRVFRSGAPLLNMF------GAKIGVCGPKTLIPRD-VEVFKVDV----FDDVDKGIDWADVV 209 (291)
T ss_dssp SCCTT-CEEEEESCCTTCHHHHHHHHHHHHT------TCEEEEESCGGGSCTT-GGGGCEEE----ESSHHHHHHHCSEE
T ss_pred CCcCC-cEEEEECCCCCCchHHHHHHHHHHC------CCEEEEECCchhCCch-HHHCCCEE----EcCHHHHhCCCCEE
Confidence 56889 99999997 89999999999999 9998777543211001 12446443 56899999999999
Q ss_pred EEcccCch
Q 021218 183 LLLISDAA 190 (316)
Q Consensus 183 iLavp~~~ 190 (316)
.. +-.+.
T Consensus 210 y~-~~~q~ 216 (291)
T 3d6n_B 210 IW-LRLQK 216 (291)
T ss_dssp EE-CCCCT
T ss_pred EE-eCccc
Confidence 99 77654
No 406
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=93.40 E-value=0.2 Score=44.88 Aligned_cols=73 Identities=14% Similarity=0.147 Sum_probs=48.9
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcc----cHHH---HHHCCceecCCCcCC---HHhhhccC
Q 021218 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR----SFAE---ARAAGFTEENGTLGD---IYETISGS 179 (316)
Q Consensus 111 ~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~----s~~~---A~~~G~~~~~~t~~~---~~e~i~~A 179 (316)
||+|.|+| .|.+|.++++.|.+. |++|++..|+... ..+. ....|+........+ +.++++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 77 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL------GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQV 77 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT------TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC------CCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCC
Confidence 37899999 599999999999998 8888877776421 1111 112344321122333 45678899
Q ss_pred CEEEEcccCc
Q 021218 180 DLVLLLISDA 189 (316)
Q Consensus 180 DIViLavp~~ 189 (316)
|+||.+....
T Consensus 78 d~vi~~a~~~ 87 (313)
T 1qyd_A 78 DVVISALAGG 87 (313)
T ss_dssp SEEEECCCCS
T ss_pred CEEEECCccc
Confidence 9999988654
No 407
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=93.39 E-value=0.21 Score=50.04 Aligned_cols=93 Identities=16% Similarity=0.154 Sum_probs=59.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc---EEEEEecCCcccHHHHHHCCceec--CCCcCC----HHhhhccCCEE
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKGSRSFAEARAAGFTEE--NGTLGD----IYETISGSDLV 182 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~---~Vivg~r~~~~s~~~A~~~G~~~~--~~t~~~----~~e~i~~ADIV 182 (316)
++|.|||+|.||..++..+.+. .++ +|++.+..... .+.....|+... +-+..+ +.+++++.|+|
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~-----~dv~~~~I~vaD~~~~~-~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvV 87 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEK-----FDIKPSQVTIIAAEGTK-VDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFL 87 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH-----BCCCGGGEEEEESSCCS-CCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEE
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----CCCceeEEEEeccchhh-hhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEE
Confidence 5799999999999999988775 033 56666554332 222333353211 111122 23466677999
Q ss_pred EEcccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 183 LLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 183 iLavp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
|-+.++.....+++...+ .|...+|.+.
T Consensus 88 IN~s~~~~~l~Im~acle---aGv~YlDTa~ 115 (480)
T 2ph5_A 88 IDVSIGISSLALIILCNQ---KGALYINAAT 115 (480)
T ss_dssp EECCSSSCHHHHHHHHHH---HTCEEEESSC
T ss_pred EECCccccCHHHHHHHHH---cCCCEEECCC
Confidence 999999888777776544 3777888774
No 408
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.35 E-value=0.083 Score=49.28 Aligned_cols=94 Identities=24% Similarity=0.276 Sum_probs=62.5
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCcccHHHHHHCCceec-CCCcCCHHhhhc------cC
Q 021218 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GS 179 (316)
Q Consensus 108 l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~~~e~i~------~A 179 (316)
-+| .+|.|+|.|.+|...++.++.. |. +|+. .+.+++..+.+++.|.... +....+..+.+. ..
T Consensus 165 ~~g-~~VlV~GaG~vG~~a~qla~~~------Ga~~Vi~-~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~ 236 (352)
T 3fpc_A 165 KLG-DTVCVIGIGPVGLMSVAGANHL------GAGRIFA-VGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGV 236 (352)
T ss_dssp CTT-CCEEEECCSHHHHHHHHHHHTT------TCSSEEE-ECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCE
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHc------CCcEEEE-ECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCC
Confidence 357 8999999999999999999988 87 5554 4555566778888886321 111123333221 48
Q ss_pred CEEEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 180 DIViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
|+|+-++.... .+++.++.++++-.++.++
T Consensus 237 D~v~d~~g~~~---~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 237 DKVVIAGGDVH---TFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp EEEEECSSCTT---HHHHHHHHEEEEEEEEECC
T ss_pred CEEEECCCChH---HHHHHHHHHhcCCEEEEec
Confidence 99998887643 3455555677777666554
No 409
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=93.31 E-value=0.25 Score=49.28 Aligned_cols=74 Identities=22% Similarity=0.110 Sum_probs=50.4
Q ss_pred ccCCCCEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCc-ccHHHHHHCCceecCCCcCCHHhhhccCCEEEE
Q 021218 107 AFNGINQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~A-lA~~Lr~~~~~~g~G~~Vivg~r~~~-~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViL 184 (316)
.|++ ++|-|||.|-.|.+ +|+.|++. |++|.+.+.+.. ...+..++.|+....+ .+.+++..++|+||+
T Consensus 16 ~~~~-~~i~~iGiGg~Gms~lA~~l~~~------G~~V~~sD~~~~~~~~~~L~~~gi~~~~G--~~~~~~~~~~d~vV~ 86 (524)
T 3hn7_A 16 YFQG-MHIHILGICGTFMGSLALLARAL------GHTVTGSDANIYPPMSTQLEQAGVTIEEG--YLIAHLQPAPDLVVV 86 (524)
T ss_dssp ---C-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCCCTTHHHHHHHTTCEEEES--CCGGGGCSCCSEEEE
T ss_pred eecC-CEEEEEEecHhhHHHHHHHHHhC------CCEEEEECCCCCcHHHHHHHHCCCEEECC--CCHHHcCCCCCEEEE
Confidence 4567 99999999999997 78888988 999887776532 2334556678764311 234445568999998
Q ss_pred c--ccCc
Q 021218 185 L--ISDA 189 (316)
Q Consensus 185 a--vp~~ 189 (316)
. +|++
T Consensus 87 Spgi~~~ 93 (524)
T 3hn7_A 87 GNAMKRG 93 (524)
T ss_dssp CTTCCTT
T ss_pred CCCcCCC
Confidence 4 5553
No 410
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=93.31 E-value=0.37 Score=43.92 Aligned_cols=76 Identities=18% Similarity=0.087 Sum_probs=50.7
Q ss_pred cccCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHH---H-------CCceecCCCcCC---
Q 021218 106 DAFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR---A-------AGFTEENGTLGD--- 171 (316)
Q Consensus 106 ~~l~G~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~---~-------~G~~~~~~t~~~--- 171 (316)
..+++ |+|.|.| .|-+|..+++.|.+. |++|++..|.......... . .++........+
T Consensus 21 ~~~~~-~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 93 (351)
T 3ruf_A 21 LIFSP-KTWLITGVAGFIGSNLLEKLLKL------NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTT 93 (351)
T ss_dssp HHHSC-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHH
T ss_pred CCCCC-CeEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHH
Confidence 34567 9999999 699999999999998 9998877775443322211 1 232211111223
Q ss_pred HHhhhccCCEEEEcccC
Q 021218 172 IYETISGSDLVLLLISD 188 (316)
Q Consensus 172 ~~e~i~~ADIViLavp~ 188 (316)
+.++++++|+||-+...
T Consensus 94 ~~~~~~~~d~Vih~A~~ 110 (351)
T 3ruf_A 94 CEQVMKGVDHVLHQAAL 110 (351)
T ss_dssp HHHHTTTCSEEEECCCC
T ss_pred HHHHhcCCCEEEECCcc
Confidence 45678899999988753
No 411
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.23 E-value=0.099 Score=48.56 Aligned_cols=38 Identities=16% Similarity=0.191 Sum_probs=33.0
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC
Q 021218 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK 149 (316)
Q Consensus 105 ~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~ 149 (316)
.-+|+| ++|.|||.|..|.+-++.|.+. |.+|.+....
T Consensus 8 ~~~l~~-k~VLVVGgG~va~rka~~Ll~~------Ga~VtViap~ 45 (274)
T 1kyq_A 8 AHQLKD-KRILLIGGGEVGLTRLYKLMPT------GCKLTLVSPD 45 (274)
T ss_dssp EECCTT-CEEEEEEESHHHHHHHHHHGGG------TCEEEEEEEE
T ss_pred EEEcCC-CEEEEECCcHHHHHHHHHHHhC------CCEEEEEcCC
Confidence 367899 9999999999999999999999 9887766543
No 412
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.22 E-value=0.099 Score=49.14 Aligned_cols=92 Identities=20% Similarity=0.215 Sum_probs=60.3
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCcCCHHhhhc------cCCE
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GSDL 181 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~~~e~i~------~ADI 181 (316)
+| ++|.|+|.|.+|...++.++.. |.+|++..+ +++..+.+++.|.... +....+..+.+. ..|+
T Consensus 189 ~g-~~VlV~G~G~vG~~a~qla~~~------Ga~Vi~~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~ 260 (363)
T 3uog_A 189 AG-DRVVVQGTGGVALFGLQIAKAT------GAEVIVTSS-SREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADH 260 (363)
T ss_dssp TT-CEEEEESSBHHHHHHHHHHHHT------TCEEEEEES-CHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEec-CchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceE
Confidence 57 8999999999999999999998 988766554 3455677888775310 111123333221 5788
Q ss_pred EEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 182 ViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
|+-++.... +++.++.++++-.++.++
T Consensus 261 vid~~g~~~----~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 261 ILEIAGGAG----LGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp EEEETTSSC----HHHHHHHEEEEEEEEEEC
T ss_pred EEECCChHH----HHHHHHHhhcCCEEEEEe
Confidence 888887433 444455666766666554
No 413
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=93.22 E-value=0.19 Score=46.90 Aligned_cols=33 Identities=18% Similarity=0.158 Sum_probs=29.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK 149 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~ 149 (316)
||||+|||.|..|..+++.+++. |+++++.+.+
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~------G~~vv~vd~~ 33 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKA------GMKVVLVDKN 33 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC
Confidence 79999999999999999999999 9988776543
No 414
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.21 E-value=0.25 Score=41.06 Aligned_cols=71 Identities=21% Similarity=0.282 Sum_probs=46.6
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCC---HHhhhccCCEEEEccc
Q 021218 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~---~~e~i~~ADIViLavp 187 (316)
|+|.|+|. |.+|.++++.|.+. |++|++..|+.++... ....++........+ +.++++++|+||.+..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~------g~~V~~~~r~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~ 76 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA------GYEVTVLVRDSSRLPS-EGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLG 76 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEESCGGGSCS-SSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC------CCeEEEEEeChhhccc-ccCCceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence 78999996 99999999999998 9988877775432111 001122110111223 4567889999998876
Q ss_pred Cc
Q 021218 188 DA 189 (316)
Q Consensus 188 ~~ 189 (316)
..
T Consensus 77 ~~ 78 (206)
T 1hdo_A 77 TR 78 (206)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 415
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.18 E-value=0.21 Score=46.53 Aligned_cols=94 Identities=14% Similarity=0.178 Sum_probs=62.8
Q ss_pred CCCCEEEEE-cccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhc-----cCCEE
Q 021218 109 NGINQIGVI-GWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-----GSDLV 182 (316)
Q Consensus 109 ~G~kkIGII-G~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~-----~ADIV 182 (316)
+| ++|.|+ |.|.+|...++.++.. |.+|+...+ +++..+.+++.|....-....+..+.++ ..|+|
T Consensus 150 ~g-~~VlV~gg~G~vG~~a~qla~~~------Ga~Vi~~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv 221 (346)
T 3fbg_A 150 EG-KTLLIINGAGGVGSIATQIAKAY------GLRVITTAS-RNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYV 221 (346)
T ss_dssp TT-CEEEEESTTSHHHHHHHHHHHHT------TCEEEEECC-SHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEE
T ss_pred CC-CEEEEEcCCCHHHHHHHHHHHHc------CCEEEEEeC-CHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEE
Confidence 68 999999 7999999999999988 987665544 4556777888875321001123333332 47999
Q ss_pred EEcccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 183 LLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 183 iLavp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
+-++... ..++..++.++++-.++.+.+
T Consensus 222 ~d~~g~~---~~~~~~~~~l~~~G~iv~~~~ 249 (346)
T 3fbg_A 222 FCTFNTD---MYYDDMIQLVKPRGHIATIVA 249 (346)
T ss_dssp EESSCHH---HHHHHHHHHEEEEEEEEESSC
T ss_pred EECCCch---HHHHHHHHHhccCCEEEEECC
Confidence 9887743 244555666777776665544
No 416
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=93.18 E-value=0.11 Score=48.82 Aligned_cols=91 Identities=20% Similarity=0.179 Sum_probs=59.8
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHH-HCCceec-CCCcCC---HHhhhccCCEEE
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEE-NGTLGD---IYETISGSDLVL 183 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~-~~G~~~~-~~t~~~---~~e~i~~ADIVi 183 (316)
+| ++|.|+|.|.+|...++.++.. |.+|++..+. ++..+.++ +.|.... + ..+ ..++....|+|+
T Consensus 187 ~g-~~VlV~GaG~vG~~~~q~a~~~------Ga~Vi~~~~~-~~~~~~~~~~lGa~~v~~--~~~~~~~~~~~~~~D~vi 256 (366)
T 1yqd_A 187 PG-KHIGIVGLGGLGHVAVKFAKAF------GSKVTVISTS-PSKKEEALKNFGADSFLV--SRDQEQMQAAAGTLDGII 256 (366)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESC-GGGHHHHHHTSCCSEEEE--TTCHHHHHHTTTCEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHhcCCceEEe--ccCHHHHHHhhCCCCEEE
Confidence 78 9999999999999999999998 9887666554 44455555 6775310 1 112 223345689999
Q ss_pred EcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 184 LLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 184 Lavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
-++..... +++.++.|+++..++.++
T Consensus 257 d~~g~~~~---~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 257 DTVSAVHP---LLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp ECCSSCCC---SHHHHHHEEEEEEEEECC
T ss_pred ECCCcHHH---HHHHHHHHhcCCEEEEEc
Confidence 99885432 233344566666655543
No 417
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=93.17 E-value=0.14 Score=46.10 Aligned_cols=69 Identities=19% Similarity=0.207 Sum_probs=45.4
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccC
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~ 188 (316)
|+|.|.| .|.+|..+++.|.+. |++|++..|. +...+ ....-+...|-+..++.++++++|+||.+...
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~-~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKND------GNTPIILTRS-IGNKA-INDYEYRVSDYTLEDLINQLNDVDAVVHLAAT 72 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESC-CC------CCEEEECCCCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhC------CCEEEEEeCC-CCccc-CCceEEEEccccHHHHHHhhcCCCEEEEcccc
Confidence 8999999 799999999999998 9998877776 32222 11111221111112355678899999987653
No 418
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.17 E-value=0.15 Score=48.25 Aligned_cols=91 Identities=19% Similarity=0.250 Sum_probs=61.6
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCcCC---HHhhhccCCEEEE
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGD---IYETISGSDLVLL 184 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~---~~e~i~~ADIViL 184 (316)
+| .+|.|+|.|.+|...++.++.. |.+|+...+ +++..+.+++.|.... + ..+ .+++....|+|+-
T Consensus 194 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~Vi~~~~-~~~~~~~a~~lGa~~vi~--~~~~~~~~~~~~g~Dvvid 263 (369)
T 1uuf_A 194 PG-KKVGVVGIGGLGHMGIKLAHAM------GAHVVAFTT-SEAKREAAKALGADEVVN--SRNADEMAAHLKSFDFILN 263 (369)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEES-SGGGHHHHHHHTCSEEEE--TTCHHHHHTTTTCEEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeC-CHHHHHHHHHcCCcEEec--cccHHHHHHhhcCCCEEEE
Confidence 57 8999999999999999999998 988655554 4556777888885310 1 112 1223356899999
Q ss_pred cccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 185 avp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
++.... .+++..+.++++..++.++
T Consensus 264 ~~g~~~---~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 264 TVAAPH---NLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp CCSSCC---CHHHHHTTEEEEEEEEECC
T ss_pred CCCCHH---HHHHHHHHhccCCEEEEec
Confidence 987543 2445556677776666543
No 419
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=93.17 E-value=0.45 Score=42.53 Aligned_cols=71 Identities=23% Similarity=0.303 Sum_probs=48.3
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCC-cEEEEEecCCcccH-HHHHHCCceecCCCcCC---HHhhhccCCEEEEc
Q 021218 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSF-AEARAAGFTEENGTLGD---IYETISGSDLVLLL 185 (316)
Q Consensus 112 kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G-~~Vivg~r~~~~s~-~~A~~~G~~~~~~t~~~---~~e~i~~ADIViLa 185 (316)
|+|.|+|. |.+|.++++.|.+. | ++|++..|+..+.. +.....|+........+ +.++++++|+|+.+
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~------g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 79 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLED------GTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIV 79 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------CSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHhc------CCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEe
Confidence 78999996 99999999999988 8 88887777654321 11223454221111333 45678899999998
Q ss_pred ccC
Q 021218 186 ISD 188 (316)
Q Consensus 186 vp~ 188 (316)
...
T Consensus 80 a~~ 82 (299)
T 2wm3_A 80 TNY 82 (299)
T ss_dssp CCH
T ss_pred CCC
Confidence 753
No 420
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=93.15 E-value=0.31 Score=46.60 Aligned_cols=80 Identities=13% Similarity=0.125 Sum_probs=42.4
Q ss_pred ccccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCC--cEEEEEecCCccc--HHHHH--HC-Cc--eecCCCcCCHHh
Q 021218 105 PDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRS--FAEAR--AA-GF--TEENGTLGDIYE 174 (316)
Q Consensus 105 ~~~l~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G--~~Vivg~r~~~~s--~~~A~--~~-G~--~~~~~t~~~~~e 174 (316)
+...+. -||.|||. |.+|.+++..|... .=-|.+ .++.+.+...... .-.+. .. .+ ........+..+
T Consensus 19 ~~s~~~-vKVaViGAaG~IG~~la~~la~~-~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~ 96 (345)
T 4h7p_A 19 PGSMSA-VKVAVTGAAGQIGYALVPLIARG-ALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRV 96 (345)
T ss_dssp ---CCC-EEEEEESTTSHHHHHHHHHHHHT-TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHH
T ss_pred CCCCCC-CEEEEECcCcHHHHHHHHHHHhc-cccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHH
Confidence 344445 69999996 99999999988764 000011 1444444332111 11111 11 11 000001346788
Q ss_pred hhccCCEEEEcc
Q 021218 175 TISGSDLVLLLI 186 (316)
Q Consensus 175 ~i~~ADIViLav 186 (316)
.+++||+||++-
T Consensus 97 a~~~advVvi~a 108 (345)
T 4h7p_A 97 AFDGVAIAIMCG 108 (345)
T ss_dssp HTTTCSEEEECC
T ss_pred HhCCCCEEEECC
Confidence 999999999975
No 421
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=93.15 E-value=0.18 Score=49.69 Aligned_cols=88 Identities=17% Similarity=0.193 Sum_probs=62.7
Q ss_pred CEEEEEccc----chHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEccc
Q 021218 112 NQIGVIGWG----SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (316)
Q Consensus 112 kkIGIIG~G----~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp 187 (316)
++|+|||.+ .+|..+.++|++. | +..| +...+.... -.|... +.++.|+-...|++++++|
T Consensus 9 ~siAVvGas~~~~~~g~~v~~~l~~~----g-~~~v-~pVnP~~~~-----i~G~~~----y~sl~~lp~~~Dlavi~vp 73 (457)
T 2csu_A 9 KGIAVIGASNDPKKLGYEVFKNLKEY----K-KGKV-YPVNIKEEE-----VQGVKA----YKSVKDIPDEIDLAIIVVP 73 (457)
T ss_dssp SEEEEETCCSCTTSHHHHHHHHHTTC----C-SSEE-EEECSSCSE-----ETTEEC----BSSTTSCSSCCSEEEECSC
T ss_pred CeEEEECcCCCCCchHHHHHHHHHHc----C-CCEE-EEECCCCCe-----ECCEec----cCCHHHcCCCCCEEEEecC
Confidence 899999988 7899999999876 2 2444 444332221 146553 4567777778999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEeCCch
Q 021218 188 DAAQADNYEKIFSCMKPNSILGLSHGFL 215 (316)
Q Consensus 188 ~~~~~~vi~ei~~~mk~gaiLid~aGv~ 215 (316)
+....+++++..+. .-..+|+...||.
T Consensus 74 ~~~~~~~v~e~~~~-Gi~~vv~~s~G~~ 100 (457)
T 2csu_A 74 KRFVKDTLIQCGEK-GVKGVVIITAGFG 100 (457)
T ss_dssp HHHHHHHHHHHHHH-TCCEEEECCCSST
T ss_pred HHHHHHHHHHHHHc-CCCEEEEecCCCC
Confidence 99999999876654 2344677788873
No 422
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=93.10 E-value=0.33 Score=46.24 Aligned_cols=93 Identities=16% Similarity=0.167 Sum_probs=53.5
Q ss_pred CEEEEEcccchHHHHHHHHHh---hhhhhcCCcEEEEEecC-CcccHHHHHHC----C------------ceecCCC---
Q 021218 112 NQIGVIGWGSQGPAQAQNLRD---SLAEAKSDIVVKVGLRK-GSRSFAEARAA----G------------FTEENGT--- 168 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~---~~~~~g~G~~Vivg~r~-~~~s~~~A~~~----G------------~~~~~~t--- 168 (316)
.+|||+|+|.+|..+.+.|.+ . .+++++...+. +.+......++ | +.. ++.
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~-----~~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v-~g~~i~ 76 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRR-----AEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFV-GDDAIR 76 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGG-----GTEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEE-TTEEEE
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCC-----CCEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEE-CCEEEE
Confidence 589999999999999999876 3 14565443332 22211121210 0 000 000
Q ss_pred ---cCCHHhh-hc--cCCEEEEcccCchHHHHHHHHHhcCCCCc--EEEEeCC
Q 021218 169 ---LGDIYET-IS--GSDLVLLLISDAAQADNYEKIFSCMKPNS--ILGLSHG 213 (316)
Q Consensus 169 ---~~~~~e~-i~--~ADIViLavp~~~~~~vi~ei~~~mk~ga--iLid~aG 213 (316)
..+++++ .. ++|+|+.|+|.....+....+++ .|+ +|++..+
T Consensus 77 v~~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~---~GakkVVId~~a 126 (339)
T 2x5j_O 77 VLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIA---AGAKKVLFSHPG 126 (339)
T ss_dssp EECCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHH---TTCSEEEESSCC
T ss_pred EEecCChHHCcccccCCCEEEECCCccccHHHHHHHHH---cCCCEEEEeccc
Confidence 1233332 12 79999999998887777765544 344 5666655
No 423
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=93.05 E-value=0.068 Score=50.74 Aligned_cols=89 Identities=16% Similarity=0.132 Sum_probs=52.3
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcC-CcEEEEEec-CCc-ccHHHHHHCCceecCCCcCCH-HhhhccCCEEEEcc
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKS-DIVVKVGLR-KGS-RSFAEARAAGFTEENGTLGDI-YETISGSDLVLLLI 186 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~-G~~Vivg~r-~~~-~s~~~A~~~G~~~~~~t~~~~-~e~i~~ADIViLav 186 (316)
++|+|+| .|.+|..+.+.|.+. +. ..+++...+ +.. +... -.|... ...+. .+.++++|+|++|+
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~----~~~~~elv~i~s~~~~g~~~~---~~g~~i---~~~~~~~~~~~~~DvV~~a~ 76 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDER----DFPLHRLHLLASAESAGQRMG---FAESSL---RVGDVDSFDFSSVGLAFFAA 76 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT----TCCCSCEEEEECTTTTTCEEE---ETTEEE---ECEEGGGCCGGGCSEEEECS
T ss_pred cEEEEECCCCHHHHHHHHHHHhC----CCCcEEEEEEecCCCCCCccc---cCCcce---EEecCCHHHhcCCCEEEEcC
Confidence 6899999 899999999988754 11 234443332 211 1000 011110 01111 12357899999999
Q ss_pred cCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 187 SDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 187 p~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
|.....++.+...+ .|..++|.++
T Consensus 77 g~~~s~~~a~~~~~---aG~kvId~Sa 100 (340)
T 2hjs_A 77 AAEVSRAHAERARA---AGCSVIDLSG 100 (340)
T ss_dssp CHHHHHHHHHHHHH---TTCEEEETTC
T ss_pred CcHHHHHHHHHHHH---CCCEEEEeCC
Confidence 98877666665543 4777777654
No 424
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=93.05 E-value=0.11 Score=47.31 Aligned_cols=91 Identities=21% Similarity=0.184 Sum_probs=60.9
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCc-CCHHhhhccCCEEEEc
Q 021218 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTL-GDIYETISGSDLVLLL 185 (316)
Q Consensus 109 ~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~-~~~~e~i~~ADIViLa 185 (316)
+| +++.|+|. |.+|...++.++.. |.+|+...++ ++..+.+++.|.... +... .+..+.+...|+|+-
T Consensus 125 ~g-~~vlV~Ga~G~vG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid- 195 (302)
T 1iz0_A 125 PG-EKVLVQAAAGALGTAAVQVARAM------GLRVLAAASR-PEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE- 195 (302)
T ss_dssp TT-CEEEESSTTBHHHHHHHHHHHHT------TCEEEEEESS-GGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-
T ss_pred CC-CEEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-
Confidence 57 99999998 99999999999998 9887666654 445566777775310 0000 122233467899998
Q ss_pred ccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 186 ISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 186 vp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
+.. +.++...+.++++..++.++
T Consensus 196 ~g~----~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 196 VRG----KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp CSC----TTHHHHHTTEEEEEEEEEC-
T ss_pred CCH----HHHHHHHHhhccCCEEEEEe
Confidence 765 24566667777776665543
No 425
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.02 E-value=0.31 Score=45.23 Aligned_cols=93 Identities=17% Similarity=0.047 Sum_probs=62.3
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCC-cCCHHhhhc-----cCC
Q 021218 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGT-LGDIYETIS-----GSD 180 (316)
Q Consensus 109 ~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t-~~~~~e~i~-----~AD 180 (316)
+| +++.|+|. |.+|.++++.++.. |.+|++..++. +..+.+++.|.... |-. ..+..+.+. ..|
T Consensus 169 ~g-~~vlV~Ga~ggiG~~~~~~a~~~------Ga~V~~~~~~~-~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D 240 (347)
T 2hcy_A 169 AG-HWVAISGAAGGLGSLAVQYAKAM------GYRVLGIDGGE-GKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAH 240 (347)
T ss_dssp TT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECST-THHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEE
T ss_pred CC-CEEEEECCCchHHHHHHHHHHHC------CCcEEEEcCCH-HHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCC
Confidence 57 89999998 89999999999998 98877666553 44567777774210 101 123444443 479
Q ss_pred EEEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 181 IViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
+|+-++... ..+++..+.|+++..++.++
T Consensus 241 ~vi~~~g~~---~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 241 GVINVSVSE---AAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp EEEECSSCH---HHHHHHTTSEEEEEEEEECC
T ss_pred EEEECCCcH---HHHHHHHHHHhcCCEEEEEe
Confidence 998887642 35566677777776665543
No 426
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=93.01 E-value=0.42 Score=43.76 Aligned_cols=76 Identities=16% Similarity=0.025 Sum_probs=50.2
Q ss_pred cccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHH----------HCCceecCCCcCC---
Q 021218 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR----------AAGFTEENGTLGD--- 171 (316)
Q Consensus 106 ~~l~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~----------~~G~~~~~~t~~~--- 171 (316)
..+++ |+|.|.|. |-+|.++++.|.+. |++|++..|......+... ..++........+
T Consensus 23 ~~~~~-~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 95 (352)
T 1sb8_A 23 LPAQP-KVWLITGVAGFIGSNLLETLLKL------DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDD 95 (352)
T ss_dssp HHHSC-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHH
T ss_pred cCccC-CeEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHH
Confidence 34677 99999996 99999999999998 9988877775432211111 1233211111223
Q ss_pred HHhhhccCCEEEEcccC
Q 021218 172 IYETISGSDLVLLLISD 188 (316)
Q Consensus 172 ~~e~i~~ADIViLavp~ 188 (316)
+.+++++.|+||-+...
T Consensus 96 ~~~~~~~~d~vih~A~~ 112 (352)
T 1sb8_A 96 CNNACAGVDYVLHQAAL 112 (352)
T ss_dssp HHHHHTTCSEEEECCSC
T ss_pred HHHHhcCCCEEEECCcc
Confidence 44678899999988764
No 427
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=92.97 E-value=0.24 Score=47.73 Aligned_cols=68 Identities=16% Similarity=0.114 Sum_probs=48.8
Q ss_pred cCCCCEEEEEccc-chHHHHHHHHHhhhhhhcCCcEEEEEecCC----cccHHHHHHC--------CceecCCCcCCHHh
Q 021218 108 FNGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAEARAA--------GFTEENGTLGDIYE 174 (316)
Q Consensus 108 l~G~kkIGIIG~G-~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~----~~s~~~A~~~--------G~~~~~~t~~~~~e 174 (316)
|+| .+|++||=+ ++..|++..+... |+++.+...+. +...+.+++. ++.. ..+++|
T Consensus 186 l~g-lkva~vGD~~nva~Sl~~~l~~l------G~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~----~~d~~e 254 (353)
T 3sds_A 186 LEG-LKIAWVGDANNVLFDLAIAATKM------GVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQ----TTVPEV 254 (353)
T ss_dssp CTT-CEEEEESCCCHHHHHHHHHHHHT------TCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEE----ESCHHH
T ss_pred cCC-CEEEEECCCchHHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEE----ECCHHH
Confidence 589 999999965 7888899888888 99887775442 2222333322 2332 468999
Q ss_pred hhccCCEEEEcc
Q 021218 175 TISGSDLVLLLI 186 (316)
Q Consensus 175 ~i~~ADIViLav 186 (316)
+++++|+|..-+
T Consensus 255 av~~aDVvytd~ 266 (353)
T 3sds_A 255 AVKDADVIVTDT 266 (353)
T ss_dssp HTTTCSEEEECC
T ss_pred HhcCCCEEEeCC
Confidence 999999998754
No 428
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=92.96 E-value=0.067 Score=51.66 Aligned_cols=86 Identities=17% Similarity=0.205 Sum_probs=53.7
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCc---EEEEEecCCc--ccHHHHHHCC--ceecCCCcCCHHhhhccCCEEE
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKGS--RSFAEARAAG--FTEENGTLGDIYETISGSDLVL 183 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~---~Vivg~r~~~--~s~~~A~~~G--~~~~~~t~~~~~e~i~~ADIVi 183 (316)
++|+||| .|..|..+.+.|.+. ++ ++.......+ +... -.| ...+ ..+ .+.++++|+|+
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~------~~p~~el~~~as~~saG~~~~---~~~~~~~~~---~~~-~~~~~~~Dvvf 69 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEES------TLPIDKIRYLASARSAGKSLK---FKDQDITIE---ETT-ETAFEGVDIAL 69 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC------CCCEEEEEEEECTTTTTCEEE---ETTEEEEEE---ECC-TTTTTTCSEEE
T ss_pred cEEEEECCCChHHHHHHHHHhcC------CCCcEEEEEEEccccCCCcce---ecCCCceEe---eCC-HHHhcCCCEEE
Confidence 6899999 899999999988775 43 3332222111 1110 011 1110 012 23468999999
Q ss_pred EcccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 184 LLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 184 Lavp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
+|+|.....++...+. +.|..++|.++
T Consensus 70 ~a~~~~~s~~~a~~~~---~~G~~vIDlSa 96 (366)
T 3pwk_A 70 FSAGSSTSAKYAPYAV---KAGVVVVDNTS 96 (366)
T ss_dssp ECSCHHHHHHHHHHHH---HTTCEEEECSS
T ss_pred ECCChHhHHHHHHHHH---HCCCEEEEcCC
Confidence 9999877777777654 35888888765
No 429
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=92.93 E-value=0.21 Score=49.50 Aligned_cols=32 Identities=25% Similarity=0.451 Sum_probs=29.4
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK 144 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vi 144 (316)
.+|+| ++|+|.|+|++|...|+.|.+. |.+|+
T Consensus 231 ~~l~g-~~vaVqGfGnVG~~~a~~L~e~------GakvV 262 (440)
T 3aog_A 231 LQVEG-ARVAIQGFGNVGNAAARAFHDH------GARVV 262 (440)
T ss_dssp CCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEE
T ss_pred CCccC-CEEEEeccCHHHHHHHHHHHHC------CCEEE
Confidence 47899 9999999999999999999998 88876
No 430
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=92.87 E-value=0.25 Score=42.59 Aligned_cols=75 Identities=15% Similarity=0.182 Sum_probs=49.2
Q ss_pred cCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCcccHHHH-HHCCceecCC-CcCCHHhhhccCCEE
Q 021218 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEA-RAAGFTEENG-TLGDIYETISGSDLV 182 (316)
Q Consensus 108 l~G~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~--~Vivg~r~~~~s~~~A-~~~G~~~~~~-t~~~~~e~i~~ADIV 182 (316)
++| |+|.|.| .|-+|.++++.|.+. |. +|++..|+..+..+.. ...-+...|- ...+..+++++.|+|
T Consensus 16 m~~-~~vlVtGasg~iG~~l~~~L~~~------G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 88 (242)
T 2bka_A 16 MQN-KSVFILGASGETGRVLLKEILEQ------GLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVG 88 (242)
T ss_dssp HTC-CEEEEECTTSHHHHHHHHHHHHH------TCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEE
T ss_pred hcC-CeEEEECCCcHHHHHHHHHHHcC------CCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEE
Confidence 578 9999999 799999999999998 98 8888777643221111 0111111010 012355678889999
Q ss_pred EEcccCc
Q 021218 183 LLLISDA 189 (316)
Q Consensus 183 iLavp~~ 189 (316)
|.+....
T Consensus 89 i~~ag~~ 95 (242)
T 2bka_A 89 FCCLGTT 95 (242)
T ss_dssp EECCCCC
T ss_pred EECCCcc
Confidence 9988653
No 431
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=92.86 E-value=0.079 Score=51.34 Aligned_cols=68 Identities=21% Similarity=0.130 Sum_probs=44.3
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCC---HHhhhccCCEEE
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVL 183 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~---~~e~i~~ADIVi 183 (316)
-++| ++|+|||.|.+|..+++.+++. |+++++.+.. +............. ....| +.++++++|+|+
T Consensus 32 ~~~~-~~IlIlG~G~lg~~~~~aa~~l------G~~v~v~d~~-~~~p~~~~ad~~~~--~~~~d~~~l~~~a~~~D~V~ 101 (419)
T 4e4t_A 32 ILPG-AWLGMVGGGQLGRMFCFAAQSM------GYRVAVLDPD-PASPAGAVADRHLR--AAYDDEAALAELAGLCEAVS 101 (419)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-TTCHHHHHSSEEEC--CCTTCHHHHHHHHHHCSEEE
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEECCC-CcCchhhhCCEEEE--CCcCCHHHHHHHHhcCCEEE
Confidence 4678 9999999999999999999999 9988766533 22222222222221 11223 345567889888
Q ss_pred E
Q 021218 184 L 184 (316)
Q Consensus 184 L 184 (316)
.
T Consensus 102 ~ 102 (419)
T 4e4t_A 102 T 102 (419)
T ss_dssp E
T ss_pred E
Confidence 4
No 432
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=92.76 E-value=0.31 Score=48.56 Aligned_cols=92 Identities=11% Similarity=0.209 Sum_probs=66.3
Q ss_pred ccCCCCEEEEEccc----------chHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhh
Q 021218 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI 176 (316)
Q Consensus 107 ~l~G~kkIGIIG~G----------~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i 176 (316)
.++| ++|+|.|+- +-...+++.|.+. |.+|.+++..-.. . ....+ ..+.++++
T Consensus 350 ~~~~-~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~------g~~V~~~DP~~~~-~---~~~~~------~~~~~~~~ 412 (478)
T 3g79_A 350 KMDG-SKVAMLGWAFIKDSDDARNTPSEPYRDLCLKA------GASVMVHDPYVVN-Y---PGVEI------SDNLEEVV 412 (478)
T ss_dssp CSTT-CEEEEECSSSSTTCSCCTTCTHHHHHHHHHHH------TCEEEEECSSCCC-B---TTBCE------ESCHHHHH
T ss_pred CCCC-CEEEEEeeecCCCCcchhcCcHHHHHHHHHHC------CCEEEEECCCccc-c---cCcce------ecCHHHHH
Confidence 5789 999999963 2356778888888 9888777654321 0 01112 24788999
Q ss_pred ccCCEEEEcccCchHHH-HHHHHHhcCC-CCcEEEEeCCch
Q 021218 177 SGSDLVLLLISDAAQAD-NYEKIFSCMK-PNSILGLSHGFL 215 (316)
Q Consensus 177 ~~ADIViLavp~~~~~~-vi~ei~~~mk-~gaiLid~aGv~ 215 (316)
+++|.|++++.=.+..+ -++.+.+.|+ +..+|+|..++.
T Consensus 413 ~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~~~~i~D~rn~~ 453 (478)
T 3g79_A 413 RNADAIVVLAGHSAYSSLKADWAKKVSAKANPVIIDGRNVI 453 (478)
T ss_dssp TTCSEEEECSCCHHHHSCCHHHHHHHHCCSSCEEEESSSCS
T ss_pred hcCCEEEEecCCHHHHhhhHHHHHHHhccCCCEEEECCCCC
Confidence 99999999998777755 2456777787 478999998764
No 433
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=92.74 E-value=0.24 Score=48.70 Aligned_cols=70 Identities=14% Similarity=0.131 Sum_probs=50.3
Q ss_pred cCCCCEEEEEc-----cc---chHHHHHHHHHhhhhhhcCCcEEEEEecCC----cccHHH----HHHCCceecCCCcCC
Q 021218 108 FNGINQIGVIG-----WG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAGFTEENGTLGD 171 (316)
Q Consensus 108 l~G~kkIGIIG-----~G---~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~----~~s~~~----A~~~G~~~~~~t~~~ 171 (316)
|+| .+|+||| +| ++..|++..+... |++|.+...++ +...+. +++.|.... ...+
T Consensus 186 l~G-lkva~vgd~~~s~Gd~nnVa~Sli~~l~~l------G~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~--~~~d 256 (418)
T 2yfk_A 186 LKG-KKVAMTWAYSPSYGKPLSVPQGIVGLMTRL------GMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFT--KTNS 256 (418)
T ss_dssp GTT-CEEEEECCCCSSSCCCSHHHHHHHHHHGGG------TCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEE--EESC
T ss_pred cCC-CEEEEEeccccccCccchHHHHHHHHHHHc------CCEEEEECCccccCCHHHHHHHHHHHHHcCCEEE--EEcC
Confidence 789 9999996 24 3999999999998 99988776552 222222 334563210 1468
Q ss_pred HHhhhccCCEEEEcc
Q 021218 172 IYETISGSDLVLLLI 186 (316)
Q Consensus 172 ~~e~i~~ADIViLav 186 (316)
++|+++++|+|..-+
T Consensus 257 ~~eav~~ADVVytd~ 271 (418)
T 2yfk_A 257 MAEAFKDADVVYPKS 271 (418)
T ss_dssp HHHHHTTCSEEEECC
T ss_pred HHHHhcCCCEEEEcc
Confidence 999999999999875
No 434
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=92.74 E-value=0.27 Score=46.18 Aligned_cols=93 Identities=14% Similarity=0.102 Sum_probs=63.2
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCcCCHHhhhc-----cCCE
Q 021218 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-----GSDL 181 (316)
Q Consensus 109 ~G~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~~~e~i~-----~ADI 181 (316)
+| +++.|+| .|.+|...++.++.. |.+|+...++ ++..+.+++.|.... +....+..+.++ ..|+
T Consensus 163 ~g-~~VlV~Ga~G~iG~~~~q~a~~~------Ga~Vi~~~~~-~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~ 234 (362)
T 2c0c_A 163 EG-KKVLVTAAAGGTGQFAMQLSKKA------KCHVIGTCSS-DEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDV 234 (362)
T ss_dssp TT-CEEEETTTTBTTHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEE
T ss_pred CC-CEEEEeCCCcHHHHHHHHHHHhC------CCEEEEEECC-HHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCE
Confidence 57 8999999 799999999999998 9886655544 455667777775310 111123333332 4799
Q ss_pred EEEcccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 182 ViLavp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
|+-++.. ..++...+.++++..++.++.
T Consensus 235 vid~~g~----~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 235 VYESVGG----AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp EEECSCT----HHHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCH----HHHHHHHHHHhcCCEEEEEeC
Confidence 9999875 355666677777766665543
No 435
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.71 E-value=0.089 Score=49.33 Aligned_cols=95 Identities=19% Similarity=0.172 Sum_probs=62.3
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCcC-CHHhhh-ccCCEEEEc
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLG-DIYETI-SGSDLVLLL 185 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~-~~~e~i-~~ADIViLa 185 (316)
+| .+|.|+|.|.+|...++.++.. |.+|+...++ ++..+.+++.|.... +.... +..+.+ ...|+|+-+
T Consensus 179 ~g-~~VlV~GaG~vG~~~~qlak~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~ 250 (360)
T 1piw_A 179 PG-KKVGIVGLGGIGSMGTLISKAM------GAETYVISRS-SRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVC 250 (360)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCEEEEEESS-STTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEEC
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCC-HHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEEC
Confidence 57 8999999999999999999998 9886655544 455677778775310 10011 333333 478999999
Q ss_pred ccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 186 ISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 186 vp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
+.... ...+++.++.++++..++.++
T Consensus 251 ~g~~~-~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 251 ASSLT-DIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp CSCST-TCCTTTGGGGEEEEEEEEECC
T ss_pred CCCCc-HHHHHHHHHHhcCCCEEEEec
Confidence 97610 012445566777777666543
No 436
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=92.68 E-value=0.18 Score=49.41 Aligned_cols=94 Identities=17% Similarity=0.183 Sum_probs=64.5
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCC-------c--c--cHHHHHHCCceecCCCcCCHH
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-------S--R--SFAEARAAGFTEENGTLGDIY 173 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~-------~--~--s~~~A~~~G~~~~~~t~~~~~ 173 (316)
+.++. .+|.|+|.|.-|-++|+.+... |. +|++.++++ . . ....+.+... .....++.
T Consensus 184 ~~l~d-~kVVi~GAGaAG~~iA~ll~~~------Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~---~~~~~~L~ 253 (398)
T 2a9f_A 184 KSLDE-VSIVVNGGGSAGLSITRKLLAA------GATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNR---EFKSGTLE 253 (398)
T ss_dssp CCTTS-CEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETTEECCTTCCCSCCC---CHHHHHSC---TTCCCSCS
T ss_pred CCCCc-cEEEEECCCHHHHHHHHHHHHc------CCCeEEEEECCCcccCCccccchHHHHHHhhccCc---ccchhhHH
Confidence 34555 7999999999999999999998 88 788777653 1 0 1112222110 01134689
Q ss_pred hhhccCCEEEEcccCchHHHHH-HHHHhcCCCCcEEEEeCC
Q 021218 174 ETISGSDLVLLLISDAAQADNY-EKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 174 e~i~~ADIViLavp~~~~~~vi-~ei~~~mk~gaiLid~aG 213 (316)
|+++++|++|=+.-| .++ +++...|+++.+|.+++-
T Consensus 254 eav~~ADV~IG~Sap----gl~T~EmVk~Ma~~pIIfalsN 290 (398)
T 2a9f_A 254 DALEGADIFIGVSAP----GVLKAEWISKMAARPVIFAMAN 290 (398)
T ss_dssp HHHHTTCSEEECCST----TCCCHHHHHTSCSSCEEEECCS
T ss_pred HHhccCCEEEecCCC----CCCCHHHHHhhCCCCEEEECCC
Confidence 999999998877544 334 366777999999997763
No 437
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=92.62 E-value=0.26 Score=45.63 Aligned_cols=94 Identities=18% Similarity=0.187 Sum_probs=61.5
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCC-cEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhh----c--cCC
Q 021218 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI----S--GSD 180 (316)
Q Consensus 108 l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G-~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i----~--~AD 180 (316)
-+| .++.|+|.|.+|...++.++.. | .+|+ +.+.+++..+.+++.|....-....+..+.+ . ..|
T Consensus 170 ~~g-~~vlv~GaG~vG~~a~qla~~~------g~~~Vi-~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d 241 (345)
T 3jv7_A 170 GPG-STAVVIGVGGLGHVGIQILRAV------SAARVI-AVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGAT 241 (345)
T ss_dssp CTT-CEEEEECCSHHHHHHHHHHHHH------CCCEEE-EEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEE
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHc------CCCEEE-EEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCe
Confidence 357 9999999999999999998876 5 3554 4444566678888888632100011222222 1 689
Q ss_pred EEEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 181 IViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
+|+-++.... .+++....++++-.++.++
T Consensus 242 ~v~d~~G~~~---~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 242 AVFDFVGAQS---TIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEESSCCHH---HHHHHHHHEEEEEEEEECS
T ss_pred EEEECCCCHH---HHHHHHHHHhcCCEEEEEC
Confidence 9999988653 4555556677777666553
No 438
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.59 E-value=0.19 Score=46.27 Aligned_cols=93 Identities=15% Similarity=0.154 Sum_probs=63.0
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHH-HHCCceec-CCCcCCHHhhhc-----cCC
Q 021218 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA-RAAGFTEE-NGTLGDIYETIS-----GSD 180 (316)
Q Consensus 109 ~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A-~~~G~~~~-~~t~~~~~e~i~-----~AD 180 (316)
+| ++|.|+|. |.+|.+.++.++.. |.+|+...++ ++..+.+ ++.|.... +....+..+.+. ..|
T Consensus 149 ~g-~~vlI~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 149 NG-ETVVISGAAGAVGSVAGQIARLK------GCRVVGIAGG-AEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCce
Confidence 57 89999998 99999999999998 9887666554 4445556 67775310 111123333332 479
Q ss_pred EEEEcccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 181 IViLavp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
+|+-++.. +.++...+.++++-.++.++.
T Consensus 221 ~vi~~~g~----~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 221 VFFDNVGG----EILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp EEEESSCH----HHHHHHHTTEEEEEEEEECCC
T ss_pred EEEECCCc----chHHHHHHHHhhCCEEEEEee
Confidence 99888773 356677778888777766543
No 439
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.57 E-value=0.59 Score=45.97 Aligned_cols=93 Identities=19% Similarity=0.169 Sum_probs=62.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCC-ceecCCCcCCH----HhhhccCCEEEEcc
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-FTEENGTLGDI----YETISGSDLVLLLI 186 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G-~~~~~~t~~~~----~e~i~~ADIViLav 186 (316)
++|-|+|.|++|..+|+.|.+ +++|.+-++..++....+.+.. ...-.+...+. ++-+.++|+++.++
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~-------~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T 308 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQ-------TYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALT 308 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------TSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECC
T ss_pred cEEEEEcchHHHHHHHHHhhh-------cCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEcc
Confidence 899999999999999998854 5678777776655556666643 11111222232 34578999999998
Q ss_pred cCchHHHHHHHHHhcCCCCcEEEEe
Q 021218 187 SDAAQADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 187 p~~~~~~vi~ei~~~mk~gaiLid~ 211 (316)
.++...=+..-+++.+....++..+
T Consensus 309 ~~De~Ni~~~llAk~~gv~kvIa~v 333 (461)
T 4g65_A 309 NEDETNIMSAMLAKRMGAKKVMVLI 333 (461)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred cCcHHHHHHHHHHHHcCCccccccc
Confidence 8876544444566666666666655
No 440
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.55 E-value=0.19 Score=46.37 Aligned_cols=93 Identities=16% Similarity=0.161 Sum_probs=63.4
Q ss_pred cCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCcCCHHhhh------ccC
Q 021218 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGS 179 (316)
Q Consensus 108 l~G~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~~~e~i------~~A 179 (316)
-+| +++.|+| .|.+|.+.++.++.. |.+|+...++ ++..+.+++.|.... +....+..+.+ ...
T Consensus 147 ~~g-~~vlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 147 KKG-DYVLLFAAAGGVGLILNQLLKMK------GAHTIAVAST-DEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp CTT-CEEEESSTTBHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCc
Confidence 367 9999999 899999999999998 9887666554 455678888885310 11112333322 247
Q ss_pred CEEEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 180 DIViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
|+|+-++.. +.++...+.++++-.++.++
T Consensus 219 D~vid~~g~----~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 219 DASFDSVGK----DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EEEEECCGG----GGHHHHHHHEEEEEEEEECC
T ss_pred eEEEECCCh----HHHHHHHHHhccCCEEEEEc
Confidence 999999875 34555566777877766654
No 441
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.51 E-value=0.29 Score=45.68 Aligned_cols=93 Identities=15% Similarity=0.106 Sum_probs=60.9
Q ss_pred cCCCCEEEEEcccchHHHH-HHHH-HhhhhhhcCCcE-EEEEecCCcc---cHHHHHHCCceecCCCcCCHHhhhc----
Q 021218 108 FNGINQIGVIGWGSQGPAQ-AQNL-RDSLAEAKSDIV-VKVGLRKGSR---SFAEARAAGFTEENGTLGDIYETIS---- 177 (316)
Q Consensus 108 l~G~kkIGIIG~G~mG~Al-A~~L-r~~~~~~g~G~~-Vivg~r~~~~---s~~~A~~~G~~~~~~t~~~~~e~i~---- 177 (316)
+.+ ++|.|+|.|.+|... ++.+ +.. |.+ |+...++ ++ ..+.+++.|....+....+..+ +.
T Consensus 171 ~~~-~~VlV~GaG~vG~~a~iqla~k~~------Ga~~Vi~~~~~-~~~~~~~~~~~~lGa~~v~~~~~~~~~-i~~~~g 241 (357)
T 2b5w_A 171 WDP-SSAFVLGNGSLGLLTLAMLKVDDK------GYENLYCLGRR-DRPDPTIDIIEELDATYVDSRQTPVED-VPDVYE 241 (357)
T ss_dssp CCC-CEEEEECCSHHHHHHHHHHHHCTT------CCCEEEEEECC-CSSCHHHHHHHHTTCEEEETTTSCGGG-HHHHSC
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHHHc------CCcEEEEEeCC-cccHHHHHHHHHcCCcccCCCccCHHH-HHHhCC
Confidence 345 899999999999999 9988 877 886 6655544 44 5678888887531111113333 32
Q ss_pred cCCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 178 ~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
..|+|+-++.... .+++..+.++++-.++.++
T Consensus 242 g~Dvvid~~g~~~---~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 242 QMDFIYEATGFPK---HAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp CEEEEEECSCCHH---HHHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECCCChH---HHHHHHHHHhcCCEEEEEe
Confidence 4799998887532 3455556677766665543
No 442
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=92.50 E-value=0.19 Score=46.80 Aligned_cols=91 Identities=15% Similarity=0.175 Sum_probs=60.9
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCcCCHHhhhc------cCC
Q 021218 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GSD 180 (316)
Q Consensus 109 ~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~~~e~i~------~AD 180 (316)
+| ++|.|+|. |.+|...++.++.. |.+|+...++ ++..+.+++.|.... +.. .+..+.+. ..|
T Consensus 159 ~g-~~VlV~Gasg~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~D 229 (342)
T 4eye_A 159 AG-ETVLVLGAAGGIGTAAIQIAKGM------GAKVIAVVNR-TAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVD 229 (342)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESS-GGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCce
Confidence 57 89999998 99999999999998 9887666554 455677777775311 111 23333222 489
Q ss_pred EEEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 181 IViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
+|+-++... .++.....++++..++.++
T Consensus 230 vvid~~g~~----~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 230 MVVDPIGGP----AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp EEEESCC------CHHHHHHTEEEEEEEEEC-
T ss_pred EEEECCchh----HHHHHHHhhcCCCEEEEEE
Confidence 999888753 3555666777777666553
No 443
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.49 E-value=0.22 Score=45.79 Aligned_cols=92 Identities=15% Similarity=0.124 Sum_probs=61.7
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCcCCHHhhh------ccCC
Q 021218 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (316)
Q Consensus 109 ~G~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~~~e~i------~~AD 180 (316)
+| +++.|+| .|.+|.+.++.++.. |.+|+...++ ++..+.+++.|.... +....+..+.+ ...|
T Consensus 140 ~g-~~VlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~D 211 (325)
T 3jyn_A 140 PG-EIILFHAAAGGVGSLACQWAKAL------GAKLIGTVSS-PEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCP 211 (325)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHH------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEEcCCcHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCce
Confidence 57 9999999 899999999999998 9887666554 455667777774210 11112333322 2578
Q ss_pred EEEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 181 IViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
+|+-++.. +.++...+.++++..++.++
T Consensus 212 vvid~~g~----~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 212 VVYDGVGQ----DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEEESSCG----GGHHHHHTTEEEEEEEEECC
T ss_pred EEEECCCh----HHHHHHHHHhcCCCEEEEEe
Confidence 88888875 24555667777777666554
No 444
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=92.46 E-value=0.17 Score=46.26 Aligned_cols=76 Identities=13% Similarity=0.051 Sum_probs=50.2
Q ss_pred ccccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH-CCceecCCCcCC---HHhhhc--
Q 021218 105 PDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTEENGTLGD---IYETIS-- 177 (316)
Q Consensus 105 ~~~l~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~-~G~~~~~~t~~~---~~e~i~-- 177 (316)
++.++| |+|.|.|. |-+|.++++.|.+. |++|++..|......+.... .++......+.+ ..++++
T Consensus 15 ~~~~~~-~~vlVTGasG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~ 87 (330)
T 2pzm_A 15 VPRGSH-MRILITGGAGCLGSNLIEHWLPQ------GHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF 87 (330)
T ss_dssp CSTTTC-CEEEEETTTSHHHHHHHHHHGGG------TCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred cccCCC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc
Confidence 789999 99999996 99999999999998 99888777753321100000 122100111223 445677
Q ss_pred cCCEEEEccc
Q 021218 178 GSDLVLLLIS 187 (316)
Q Consensus 178 ~ADIViLavp 187 (316)
+.|+||-+..
T Consensus 88 ~~D~vih~A~ 97 (330)
T 2pzm_A 88 KPTHVVHSAA 97 (330)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCc
Confidence 8999998874
No 445
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=92.39 E-value=0.045 Score=50.07 Aligned_cols=69 Identities=25% Similarity=0.147 Sum_probs=44.1
Q ss_pred ccccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCC---HHhhhccCC
Q 021218 105 PDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSD 180 (316)
Q Consensus 105 ~~~l~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~---~~e~i~~AD 180 (316)
...+++ |+|-|.|. |-+|..+++.|.+. |++|++..|.... ...-+...| ..+ +.++++++|
T Consensus 14 ~~~~~~-~~vlVtGatG~iG~~l~~~L~~~------G~~V~~~~r~~~~-----~~~~~~~~D--l~d~~~~~~~~~~~d 79 (347)
T 4id9_A 14 LVPRGS-HMILVTGSAGRVGRAVVAALRTQ------GRTVRGFDLRPSG-----TGGEEVVGS--LEDGQALSDAIMGVS 79 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHT------TCCEEEEESSCCS-----SCCSEEESC--TTCHHHHHHHHTTCS
T ss_pred ccccCC-CEEEEECCCChHHHHHHHHHHhC------CCEEEEEeCCCCC-----CCccEEecC--cCCHHHHHHHHhCCC
Confidence 467788 99999996 99999999999998 9988877776432 111122111 223 456788999
Q ss_pred EEEEccc
Q 021218 181 LVLLLIS 187 (316)
Q Consensus 181 IViLavp 187 (316)
+||-+..
T Consensus 80 ~vih~A~ 86 (347)
T 4id9_A 80 AVLHLGA 86 (347)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 9997764
No 446
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=92.35 E-value=0.17 Score=46.49 Aligned_cols=93 Identities=17% Similarity=0.141 Sum_probs=66.1
Q ss_pred cCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCcCC-HHhhhccCCEEEE
Q 021218 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGD-IYETISGSDLVLL 184 (316)
Q Consensus 108 l~G~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~-~~e~i~~ADIViL 184 (316)
-+| .+|.|+| .|.+|...++.++.. |.+|+...+ ++..+.+++.|.... +....+ ..+.++..|+|+-
T Consensus 151 ~~g-~~vlV~Ga~G~vG~~a~q~a~~~------Ga~vi~~~~--~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d 221 (321)
T 3tqh_A 151 KQG-DVVLIHAGAGGVGHLAIQLAKQK------GTTVITTAS--KRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVID 221 (321)
T ss_dssp CTT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEEC--HHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEE
T ss_pred CCC-CEEEEEcCCcHHHHHHHHHHHHc------CCEEEEEec--cchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEE
Confidence 467 9999997 999999999999998 988765543 234677888885310 111224 6666788999999
Q ss_pred cccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 185 avp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
++.... +++..+.++++-.++.+..
T Consensus 222 ~~g~~~----~~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 222 LVGGDV----GIQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp SSCHHH----HHHHGGGEEEEEEEEECCS
T ss_pred CCCcHH----HHHHHHhccCCCEEEEeCC
Confidence 987532 3566778888877776644
No 447
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=92.34 E-value=0.46 Score=45.74 Aligned_cols=92 Identities=13% Similarity=0.072 Sum_probs=62.3
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCcCC---------------
Q 021218 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGD--------------- 171 (316)
Q Consensus 109 ~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~--------------- 171 (316)
+| ++|.|+|. |.+|...++.++.. |.+|++..+ +++..+.+++.|.... +....+
T Consensus 220 ~g-~~VlV~GasG~iG~~a~qla~~~------Ga~vi~~~~-~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~ 291 (447)
T 4a0s_A 220 QG-DIVLIWGASGGLGSYAIQFVKNG------GGIPVAVVS-SAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVET 291 (447)
T ss_dssp TT-CEEEETTTTSHHHHHHHHHHHHT------TCEEEEEES-SHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHH
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHc------CCEEEEEeC-CHHHHHHHHhcCCCEEEecccccccccccccccccchh
Confidence 56 89999998 99999999999998 988776664 4556677888885310 000000
Q ss_pred ----HHh---hh-ccCCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 172 ----IYE---TI-SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 172 ----~~e---~i-~~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
.++ .. ...|+|+-++.. ..++.....++++-.++.++
T Consensus 292 ~~~~~~~v~~~~g~g~Dvvid~~G~----~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 292 GRKLAKLVVEKAGREPDIVFEHTGR----VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHSSCCSEEEECSCH----HHHHHHHHHSCTTCEEEESC
T ss_pred hhHHHHHHHHHhCCCceEEEECCCc----hHHHHHHHHHhcCCEEEEEe
Confidence 011 11 358999998875 24566667788887777654
No 448
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=92.27 E-value=0.17 Score=46.24 Aligned_cols=89 Identities=15% Similarity=0.134 Sum_probs=59.8
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccCCEEEEcccC
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLavp~ 188 (316)
+| .+|.|+|.|.+|...++.++.. |.+|+... +++..+.+++.|...- ..+.+++-...|+|+-++..
T Consensus 142 ~g-~~VlV~GaG~vG~~a~qlak~~------Ga~Vi~~~--~~~~~~~~~~lGa~~v---~~d~~~v~~g~Dvv~d~~g~ 209 (315)
T 3goh_A 142 KQ-REVLIVGFGAVNNLLTQMLNNA------GYVVDLVS--ASLSQALAAKRGVRHL---YREPSQVTQKYFAIFDAVNS 209 (315)
T ss_dssp SC-CEEEEECCSHHHHHHHHHHHHH------TCEEEEEC--SSCCHHHHHHHTEEEE---ESSGGGCCSCEEEEECC---
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEE--ChhhHHHHHHcCCCEE---EcCHHHhCCCccEEEECCCc
Confidence 67 9999999999999999999998 98776555 4566788888887531 22322223468999988765
Q ss_pred chHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 189 AAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 189 ~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
.. +.+....++++-.++.+.+
T Consensus 210 ~~----~~~~~~~l~~~G~~v~~g~ 230 (315)
T 3goh_A 210 QN----AAALVPSLKANGHIICIQD 230 (315)
T ss_dssp --------TTGGGEEEEEEEEEECC
T ss_pred hh----HHHHHHHhcCCCEEEEEeC
Confidence 43 2445667777777665543
No 449
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=92.26 E-value=0.52 Score=44.88 Aligned_cols=95 Identities=19% Similarity=0.160 Sum_probs=52.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC-CcccHHHHHH----CC------------ceecCC------C
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARA----AG------------FTEENG------T 168 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~-~~~s~~~A~~----~G------------~~~~~~------t 168 (316)
.+|||+|+|.+|..+.+.|... .+.+++++...+. +.+......+ .| +.. ++ .
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~---~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v-~g~~i~v~~ 78 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGR---QNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITV-NGKTMKIVC 78 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC---SCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEE-TTEEEEEEC
T ss_pred eEEEEECCCHHHHHHHHHHHhc---CCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeee-cCceEEEEe
Confidence 5899999999999999998764 0124665443332 2111111111 10 000 00 0
Q ss_pred cCCHHhhh---ccCCEEEEcccCchHHHHHHHHHhcCCCCc--EEEEeCC
Q 021218 169 LGDIYETI---SGSDLVLLLISDAAQADNYEKIFSCMKPNS--ILGLSHG 213 (316)
Q Consensus 169 ~~~~~e~i---~~ADIViLavp~~~~~~vi~ei~~~mk~ga--iLid~aG 213 (316)
..+++++- .++|+|+.|++.....+.....++ .|+ +|++.++
T Consensus 79 ~~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~---~GakkVVId~~~ 125 (339)
T 3b1j_A 79 DRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQ---AGAKKVLITAPG 125 (339)
T ss_dssp CSCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHH---TTCSEEEESSCC
T ss_pred cCChHHCcccccCCCEEEECCCccccHHHHHHHHH---cCCcEEEEeCCC
Confidence 12444432 278999999998877777665543 243 3555543
No 450
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=92.25 E-value=0.36 Score=45.88 Aligned_cols=94 Identities=17% Similarity=0.208 Sum_probs=54.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC-CcccHHHHHH----CC------------ceecCCC-----
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARA----AG------------FTEENGT----- 168 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~-~~~s~~~A~~----~G------------~~~~~~t----- 168 (316)
|.+|||+|.|.+|..+.+.|... ..++++...+. +.+......+ +| +.. ++.
T Consensus 1 mikVgI~G~G~iGr~l~R~l~~~-----~~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v-~g~~i~v~ 74 (334)
T 3cmc_O 1 AVKVGINGFGRIGRNVFRAALKN-----PDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVV-NGKEIIVK 74 (334)
T ss_dssp CEEEEEESCSHHHHHHHHHHTTC-----TTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEE-TTEEEEEE
T ss_pred CeEEEEECCCHHHHHHHHHHhCC-----CCeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEE-CCEEEEEE
Confidence 57899999999999999988654 13565444433 1111111111 11 000 000
Q ss_pred -cCCHHhh-hc--cCCEEEEcccCchHHHHHHHHHhcCCCCc--EEEEeCC
Q 021218 169 -LGDIYET-IS--GSDLVLLLISDAAQADNYEKIFSCMKPNS--ILGLSHG 213 (316)
Q Consensus 169 -~~~~~e~-i~--~ADIViLavp~~~~~~vi~ei~~~mk~ga--iLid~aG 213 (316)
..+.+++ .. ++|+|+.|+|.....+..+..++ .|+ +|++.++
T Consensus 75 ~~~dp~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~---~Gak~vVId~pa 122 (334)
T 3cmc_O 75 AERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLE---AGAKKVIISAPA 122 (334)
T ss_dssp CCSSGGGCCTGGGTCCEEEECSSSCCBHHHHTHHHH---TTCSEEEESSCC
T ss_pred ecCChhhcCcccCccCEEEECCCchhhHHHHHHHHH---CCCCEEEEeCCC
Confidence 1133332 12 79999999998887777765543 465 7776654
No 451
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.23 E-value=0.078 Score=51.51 Aligned_cols=70 Identities=14% Similarity=0.207 Sum_probs=48.1
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCccc-HHHHHHCCceecCCCcCCHHhhhccCCEEEEc
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS-FAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s-~~~A~~~G~~~~~~t~~~~~e~i~~ADIViLa 185 (316)
+++| |+|.|||.|-.|.+.|+.|.+. |++|...+.+.... ....+ .|+....+. ...+.++.+|+||+.
T Consensus 2 ~~~~-~~v~viG~G~~G~~~a~~l~~~------G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~--~~~~~~~~~d~vV~s 71 (439)
T 2x5o_A 2 DYQG-KNVVIIGLGLTGLSCVDFFLAR------GVTPRVMDTRMTPPGLDKLP-EAVERHTGS--LNDEWLMAADLIVAS 71 (439)
T ss_dssp CCTT-CCEEEECCHHHHHHHHHHHHTT------TCCCEEEESSSSCTTGGGSC-TTSCEEESS--CCHHHHHTCSEEEEC
T ss_pred CCCC-CEEEEEeecHHHHHHHHHHHhC------CCEEEEEECCCCcchhHHhh-CCCEEEECC--CcHHHhccCCEEEeC
Confidence 4678 9999999999999999999888 99887777654322 11112 465431111 125566689999997
Q ss_pred c
Q 021218 186 I 186 (316)
Q Consensus 186 v 186 (316)
.
T Consensus 72 ~ 72 (439)
T 2x5o_A 72 P 72 (439)
T ss_dssp T
T ss_pred C
Confidence 4
No 452
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=92.21 E-value=0.83 Score=41.40 Aligned_cols=94 Identities=15% Similarity=0.204 Sum_probs=58.0
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC----Cceec-CCCcCCHHhhhccCCEE
Q 021218 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GFTEE-NGTLGDIYETISGSDLV 182 (316)
Q Consensus 108 l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~----G~~~~-~~t~~~~~e~i~~ADIV 182 (316)
-+| ++|--||+|. |.-....++.. |.+ +++.+.++...+.+++. |.... .-...+..+.-...|+|
T Consensus 89 ~~~-~~vLDiGcG~-G~~~~~la~~~------~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v 159 (318)
T 2fk8_A 89 KPG-MTLLDIGCGW-GTTMRRAVERF------DVN-VIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRI 159 (318)
T ss_dssp CTT-CEEEEESCTT-SHHHHHHHHHH------CCE-EEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEE
T ss_pred CCc-CEEEEEcccc-hHHHHHHHHHC------CCE-EEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEE
Confidence 357 8999999998 44444444444 555 45666666555555442 21100 00023444433578999
Q ss_pred EEc-----ccCchHHHHHHHHHhcCCCCcEEEE
Q 021218 183 LLL-----ISDAAQADNYEKIFSCMKPNSILGL 210 (316)
Q Consensus 183 iLa-----vp~~~~~~vi~ei~~~mk~gaiLid 210 (316)
+.. +++....++++++...||||..++.
T Consensus 160 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 160 VSIEAFEHFGHENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp EEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred EEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 887 5656667799999999999987653
No 453
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=92.14 E-value=0.28 Score=46.57 Aligned_cols=93 Identities=16% Similarity=0.095 Sum_probs=52.6
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC-CcccHHHHHHCCcee---------cCC------------C
Q 021218 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGFTE---------ENG------------T 168 (316)
Q Consensus 111 ~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~-~~~s~~~A~~~G~~~---------~~~------------t 168 (316)
|.||||+|.|.+|..+.+.|... ..++|+...+. +........++.-.. +++ .
T Consensus 1 ~ikVgI~G~G~iG~~l~R~l~~~-----~~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~ 75 (330)
T 1gad_O 1 TIKVGINGFGRIGRIVFRAAQKR-----SDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTA 75 (330)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-----SSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEEC
T ss_pred CeEEEEECcCHHHHHHHHHHHcC-----CCeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEE
Confidence 46899999999999999998764 13565444433 222111111221100 000 0
Q ss_pred cCCHHhh---hccCCEEEEcccCchHHHHHHHHHhcCCCCcEEEEe
Q 021218 169 LGDIYET---ISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 169 ~~~~~e~---i~~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~ 211 (316)
..+.+++ ..++|+|+.|+|-....+..+..++ .|+.++|.
T Consensus 76 ~~dp~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~---~GakvVdl 118 (330)
T 1gad_O 76 ERDPANLKWDEVGVDVVAEATGLFLTDETARKHIT---AGAKKVVM 118 (330)
T ss_dssp CSSGGGGCHHHHTCSEEEECSSSCCSHHHHTHHHH---TTCSEEEE
T ss_pred cCChhhCccccccCCEEEECCCccccHHHHHHHHH---CCCEEEEE
Confidence 1123332 1479999999998887777665543 46654443
No 454
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=92.11 E-value=0.24 Score=45.92 Aligned_cols=88 Identities=14% Similarity=0.167 Sum_probs=56.0
Q ss_pred cccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccC
Q 021218 100 LFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGS 179 (316)
Q Consensus 100 ~F~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~A 179 (316)
.|..+....+| ++|++||+ + +.+.+.+ .. +.++.+.+++.. .|... ....++++++|
T Consensus 131 ~~~~~~~~~~g-~kV~vIG~--~-P~i~~~l-~~------~~~v~V~d~~p~--------~g~~p----~~~~e~ll~~a 187 (270)
T 2h1q_A 131 PFIMSQNEVKG-KKVGVVGH--F-PHLESLL-EP------ICDLSILEWSPE--------EGDYP----LPASEFILPEC 187 (270)
T ss_dssp HHHHTTTTTTT-SEEEEESC--C-TTHHHHH-TT------TSEEEEEESSCC--------TTCEE----GGGHHHHGGGC
T ss_pred HHHHHHhhcCC-CEEEEECC--C-HHHHHHH-hC------CCCEEEEECCCC--------CCCCC----hHHHHHHhhcC
Confidence 45444466789 99999999 3 6666655 34 678888887753 24332 22466789999
Q ss_pred CEEEEcccCchHHHHHHHHHhcCCCCcEEEEe
Q 021218 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 180 DIViLavp~~~~~~vi~ei~~~mk~gaiLid~ 211 (316)
|+|++.-. +-....+++++++.++.+.++++
T Consensus 188 D~viiTGs-TlvN~Ti~~lL~~~~~a~~vvl~ 218 (270)
T 2h1q_A 188 DYVYITCA-SVVDKTLPRLLELSRNARRITLV 218 (270)
T ss_dssp SEEEEETH-HHHHTCHHHHHHHTTTSSEEEEE
T ss_pred CEEEEEee-eeecCCHHHHHHhCccCCeEEEE
Confidence 99887632 22223566677777665455443
No 455
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=92.10 E-value=1.2 Score=41.79 Aligned_cols=93 Identities=16% Similarity=0.106 Sum_probs=62.8
Q ss_pred cCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCcCCHHhhhc-----cCC
Q 021218 108 FNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-----GSD 180 (316)
Q Consensus 108 l~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~~~e~i~-----~AD 180 (316)
-+| .+|.|+|. |.+|...++.++.. |.+|+... +++..+.+++.|.... +....+..+.++ ..|
T Consensus 163 ~~g-~~VlV~Ga~G~vG~~a~qla~~~------Ga~Vi~~~--~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKP-VYVLVYGGSTATATVTMQMLRLS------GYIPIATC--SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSC-CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEE--CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCC-cEEEEECCCcHHHHHHHHHHHHC------CCEEEEEe--CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCcc
Confidence 578 99999999 89999999999998 98776553 3566788999986310 111123333332 389
Q ss_pred EEEEcccCchHHHHHHHHHhcC-CCCcEEEEeC
Q 021218 181 LVLLLISDAAQADNYEKIFSCM-KPNSILGLSH 212 (316)
Q Consensus 181 IViLavp~~~~~~vi~ei~~~m-k~gaiLid~a 212 (316)
+|+-++.... .++.....+ +++-.++.++
T Consensus 234 ~v~d~~g~~~---~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 234 YALDCITNVE---STTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EEEESSCSHH---HHHHHHHHSCTTCEEEEESS
T ss_pred EEEECCCchH---HHHHHHHHhhcCCCEEEEEe
Confidence 9999988643 344445556 5666666554
No 456
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=92.08 E-value=0.56 Score=45.40 Aligned_cols=69 Identities=23% Similarity=0.183 Sum_probs=40.9
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCc-----EEEEEecCCccc----HHHHH--HCCce---ecCCCcCCHHhhh
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI-----VVKVGLRKGSRS----FAEAR--AAGFT---EENGTLGDIYETI 176 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~-----~Vivg~r~~~~s----~~~A~--~~G~~---~~~~t~~~~~e~i 176 (316)
.||+||| .|.+|.+++..|... ++ .+.+.+-..... ...+. .++.. ..-....+..+.+
T Consensus 33 ~KV~ViGAaG~VG~~la~~l~~~------~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~ 106 (375)
T 7mdh_A 33 VNIAVSGAAGMISNHLLFKLASG------EVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVF 106 (375)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT------TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHcC------CcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHh
Confidence 7999999 899999999999876 43 144332211121 11121 22210 0000123567889
Q ss_pred ccCCEEEEcc
Q 021218 177 SGSDLVLLLI 186 (316)
Q Consensus 177 ~~ADIViLav 186 (316)
++||+||++-
T Consensus 107 ~daDvVVita 116 (375)
T 7mdh_A 107 EDVDWALLIG 116 (375)
T ss_dssp TTCSEEEECC
T ss_pred CCCCEEEEcC
Confidence 9999999975
No 457
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=92.08 E-value=0.85 Score=40.65 Aligned_cols=39 Identities=15% Similarity=0.092 Sum_probs=33.4
Q ss_pred cccCCCCEEEEEccc---chHHHHHHHHHhhhhhhcCCcEEEEEecCCc
Q 021218 106 DAFNGINQIGVIGWG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS 151 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G---~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~ 151 (316)
.+|+| |++-|-|.+ -||.++|+.|.+. |.+|++..|+.+
T Consensus 2 ~~l~g-K~alVTGaa~~~GIG~aiA~~la~~------Ga~Vvi~~r~~~ 43 (256)
T 4fs3_A 2 LNLEN-KTYVIMGIANKRSIAFGVAKVLDQL------GAKLVFTYRKER 43 (256)
T ss_dssp CCCTT-CEEEEECCCSTTCHHHHHHHHHHHT------TCEEEEEESSGG
T ss_pred cCCCC-CEEEEECCCCCchHHHHHHHHHHHC------CCEEEEEECCHH
Confidence 47899 999999974 4999999999999 999988887643
No 458
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=92.07 E-value=0.18 Score=49.56 Aligned_cols=77 Identities=19% Similarity=0.188 Sum_probs=48.0
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecC---------Ccc-cHHHHHHCCceecCCCcCCHHh
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRK---------GSR-SFAEARAAGFTEENGTLGDIYE 174 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vi-vg~r~---------~~~-s~~~A~~~G~~~~~~t~~~~~e 174 (316)
.+|+| +++.|.|.|++|...|+.|.+. |.+|+ +.+.+ +.+ ..+...+.|-.. +-.. +.++
T Consensus 214 ~~l~g-k~vaVqG~GnVG~~~a~~L~~~------GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~-~~~~-~~~e 284 (419)
T 3aoe_E 214 LDLRG-ARVVVQGLGQVGAAVALHAERL------GMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLP-RLDL-APEE 284 (419)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCS-CCCB-CTTT
T ss_pred CCccC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcc-eeec-cchh
Confidence 47999 9999999999999999999988 98877 44441 112 222333333110 0001 1122
Q ss_pred hh-ccCCEEEEcccCchH
Q 021218 175 TI-SGSDLVLLLISDAAQ 191 (316)
Q Consensus 175 ~i-~~ADIViLavp~~~~ 191 (316)
++ -+||+++-|...+.+
T Consensus 285 ~~~~~~DVliP~A~~n~i 302 (419)
T 3aoe_E 285 VFGLEAEVLVLAAREGAL 302 (419)
T ss_dssp GGGSSCSEEEECSCTTCB
T ss_pred hhccCceEEEeccccccc
Confidence 22 379999988765554
No 459
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.01 E-value=0.46 Score=43.68 Aligned_cols=92 Identities=17% Similarity=0.180 Sum_probs=60.9
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCc-CCHHhhhc-----cCC
Q 021218 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTL-GDIYETIS-----GSD 180 (316)
Q Consensus 109 ~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~-~~~~e~i~-----~AD 180 (316)
+| +++.|+|. |.+|.+.++.++.. |.+|++..++ ++..+.+++.|.... |... .+..+.+. ..|
T Consensus 145 ~g-~~vlV~Ga~ggiG~~~~~~~~~~------G~~V~~~~~~-~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d 216 (333)
T 1v3u_A 145 GG-ETVLVSAAAGAVGSVVGQIAKLK------GCKVVGAAGS-DEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYD 216 (333)
T ss_dssp SS-CEEEEESTTBHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEE
T ss_pred CC-CEEEEecCCCcHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCe
Confidence 57 89999997 99999999999998 9887766654 344556666664210 1111 23333332 478
Q ss_pred EEEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 181 IViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
+|+-++.. ..+++..+.++++..++.++
T Consensus 217 ~vi~~~g~----~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 217 CYFDNVGG----EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEEESSCH----HHHHHHHTTEEEEEEEEECC
T ss_pred EEEECCCh----HHHHHHHHHHhcCCEEEEEe
Confidence 88888764 23566667777777666554
No 460
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.93 E-value=0.055 Score=48.30 Aligned_cols=68 Identities=13% Similarity=0.109 Sum_probs=44.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCC-cCCHHhhhcc-CCEEEEcccC
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT-LGDIYETISG-SDLVLLLISD 188 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t-~~~~~e~i~~-ADIViLavp~ 188 (316)
|+|.|+|.|.+|..+++.|.+. |++|+...|+.+.. ....-+...|-+ ..++.++++. +|+||-+..+
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~ 73 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQ------GHEVTGLRRSAQPM---PAGVQTLIADVTRPDTLASIVHLRPEILVYCVAA 73 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEECTTSCC---CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCcccc---ccCCceEEccCCChHHHHHhhcCCCCEEEEeCCC
Confidence 7999999999999999999998 99888777764431 011112211100 1123445666 9999987743
No 461
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=91.86 E-value=0.29 Score=46.84 Aligned_cols=70 Identities=10% Similarity=0.027 Sum_probs=49.2
Q ss_pred ccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCC----cccHHH----HHHCCceecCCCcCCHHhhhc
Q 021218 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAGFTEENGTLGDIYETIS 177 (316)
Q Consensus 107 ~l~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~----~~s~~~----A~~~G~~~~~~t~~~~~e~i~ 177 (316)
.|+| .||++||- +++..|++..+... |+++.+...++ +...+. +++.|.... ...+++ +++
T Consensus 172 ~l~g-lkva~vGD~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~--~~~d~~-av~ 241 (339)
T 4a8t_A 172 KLED-CKVVFVGDATQVCFSLGLITTKM------GMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFL--VTDDAS-SVE 241 (339)
T ss_dssp CGGG-CEEEEESSCCHHHHHHHHHHHHT------TCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEE--EECCGG-GGT
T ss_pred CCCC-CEEEEECCCchhHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEE--EECChh-HHc
Confidence 6888 99999994 68999999999998 99887775542 112222 344563211 145788 999
Q ss_pred cCCEEEEcc
Q 021218 178 GSDLVLLLI 186 (316)
Q Consensus 178 ~ADIViLav 186 (316)
++|+|..-+
T Consensus 242 ~aDvvytd~ 250 (339)
T 4a8t_A 242 GADFLYTDV 250 (339)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEecC
Confidence 999999743
No 462
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=91.74 E-value=0.79 Score=41.38 Aligned_cols=72 Identities=17% Similarity=0.147 Sum_probs=44.8
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCC-cccH---HHHHHCC-ceecCCCcCC---HHhhhcc--C
Q 021218 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSF---AEARAAG-FTEENGTLGD---IYETISG--S 179 (316)
Q Consensus 111 ~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~-~~s~---~~A~~~G-~~~~~~t~~~---~~e~i~~--A 179 (316)
||+|.|.| .|-+|.++++.|.+. |++|++..|.. .... +.....+ +........+ +++++++ .
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 74 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQ------GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMP 74 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhC------CCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCC
Confidence 68999999 799999999999998 99887776532 1111 1111122 2110111223 4456777 9
Q ss_pred CEEEEcccC
Q 021218 180 DLVLLLISD 188 (316)
Q Consensus 180 DIViLavp~ 188 (316)
|+||-+...
T Consensus 75 d~vih~A~~ 83 (347)
T 1orr_A 75 DSCFHLAGQ 83 (347)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 999988754
No 463
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=91.68 E-value=0.44 Score=45.00 Aligned_cols=73 Identities=11% Similarity=0.081 Sum_probs=52.7
Q ss_pred cccCCCCEEEEEcc---cchHHHHHHHHHhhhhhhcCCcEEEEEecCC----cccHHHHHHCCceecCCCcCCHHhhhcc
Q 021218 106 DAFNGINQIGVIGW---GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAEARAAGFTEENGTLGDIYETISG 178 (316)
Q Consensus 106 ~~l~G~kkIGIIG~---G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~----~~s~~~A~~~G~~~~~~t~~~~~e~i~~ 178 (316)
..|+| .+|++||- +++..|++..+... .|++|.+...++ +...+.+++.|.... ...+++|++++
T Consensus 150 g~l~g-l~va~vGD~~~~rva~Sl~~~~~~~-----~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~--~~~d~~eav~~ 221 (310)
T 3csu_A 150 GRLDN-LHVAMVGDLKYGRTVHSLTQALAKF-----DGNRFYFIAPDALAMPQYILDMLDEKGIAWS--LHSSIEEVMAE 221 (310)
T ss_dssp SCSSS-CEEEEESCTTTCHHHHHHHHHHHTS-----SSCEEEEECCGGGCCCHHHHHHHHHTTCCEE--ECSCGGGTTTT
T ss_pred CCcCC-cEEEEECCCCCCchHHHHHHHHHhC-----CCCEEEEECCcccccCHHHHHHHHHcCCeEE--EEcCHHHHhcC
Confidence 56889 99999997 58999999988764 178877765432 223355666674311 14689999999
Q ss_pred CCEEEEcc
Q 021218 179 SDLVLLLI 186 (316)
Q Consensus 179 ADIViLav 186 (316)
+|+|..-.
T Consensus 222 aDvvyt~~ 229 (310)
T 3csu_A 222 VDILYMTR 229 (310)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 99998865
No 464
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=91.68 E-value=0.28 Score=45.81 Aligned_cols=92 Identities=18% Similarity=0.227 Sum_probs=62.0
Q ss_pred CCCCEEEEE-cccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCcCCHHhhhc-----cCCE
Q 021218 109 NGINQIGVI-GWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-----GSDL 181 (316)
Q Consensus 109 ~G~kkIGII-G~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~~~e~i~-----~ADI 181 (316)
+| ++|.|+ |.|.+|.+.++.++.. |.+|++..++ ++..+.+++.|.... +....+..+.+. ..|+
T Consensus 167 ~g-~~VlV~Gg~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dv 238 (353)
T 4dup_A 167 EG-ESVLIHGGTSGIGTTAIQLARAF------GAEVYATAGS-TGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDI 238 (353)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEE
T ss_pred CC-CEEEEEcCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceE
Confidence 57 899999 6899999999999998 9987666544 455667777774310 111123333333 5899
Q ss_pred EEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 182 ViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
|+-++... .++..++.++++..++.++
T Consensus 239 vid~~g~~----~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 239 ILDMIGAA----YFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EEESCCGG----GHHHHHHTEEEEEEEEECC
T ss_pred EEECCCHH----HHHHHHHHhccCCEEEEEE
Confidence 99988764 3455566777777666554
No 465
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=91.66 E-value=0.14 Score=51.03 Aligned_cols=73 Identities=22% Similarity=0.198 Sum_probs=43.3
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHh-hhccCCEEEEc
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYE-TISGSDLVLLL 185 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e-~i~~ADIViLa 185 (316)
.++| +++.|+|.|-+|.+++..|.+. |.+|++..|+.++..+.+.+.+.... ...+.++ .....|+||.+
T Consensus 361 ~l~~-k~vlV~GaGGig~aia~~L~~~------G~~V~i~~R~~~~a~~la~~~~~~~~--~~~dl~~~~~~~~DilVN~ 431 (523)
T 2o7s_A 361 PLAS-KTVVVIGAGGAGKALAYGAKEK------GAKVVIANRTYERALELAEAIGGKAL--SLTDLDNYHPEDGMVLANT 431 (523)
T ss_dssp ------CEEEECCSHHHHHHHHHHHHH------CC-CEEEESSHHHHHHHHHHTTC-CE--ETTTTTTC--CCSEEEEEC
T ss_pred ccCC-CEEEEECCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHcCCcee--eHHHhhhccccCceEEEEC
Confidence 4678 8999999999999999999998 88888888775544445555432110 0112222 12346777777
Q ss_pred ccC
Q 021218 186 ISD 188 (316)
Q Consensus 186 vp~ 188 (316)
++.
T Consensus 432 agv 434 (523)
T 2o7s_A 432 TSM 434 (523)
T ss_dssp SST
T ss_pred CCC
Confidence 764
No 466
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=91.60 E-value=0.38 Score=47.03 Aligned_cols=71 Identities=17% Similarity=0.185 Sum_probs=50.4
Q ss_pred ccCCCCEEEEEcc-----c---chHHHHHHHHHhhhhhhcCCcEEEEEecCC----cccHH----HHHHCCceecCCCcC
Q 021218 107 AFNGINQIGVIGW-----G---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAGFTEENGTLG 170 (316)
Q Consensus 107 ~l~G~kkIGIIG~-----G---~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~----~~s~~----~A~~~G~~~~~~t~~ 170 (316)
.|+| ++|+|||. | ++..|++..+... |++|.+...++ +...+ .+.+.|.... .+.
T Consensus 188 ~l~G-lkva~vgd~~~~~G~~nnVa~Sli~~~~~l------G~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~--~~~ 258 (399)
T 3q98_A 188 NLKG-KKIAMTWAYSPSYGKPLSVPQGIIGLMTRF------GMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFR--QVT 258 (399)
T ss_dssp GGTT-CEEEEECCCCSSCCCCTHHHHHHHHHHGGG------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEE--EES
T ss_pred ccCC-CEEEEEEecccccCcchHHHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEE--EEc
Confidence 4788 99999974 4 6889999999888 99988776542 22222 2334563211 146
Q ss_pred CHHhhhccCCEEEEcc
Q 021218 171 DIYETISGSDLVLLLI 186 (316)
Q Consensus 171 ~~~e~i~~ADIViLav 186 (316)
+++|+++++|+|..-+
T Consensus 259 d~~eav~~aDvVytd~ 274 (399)
T 3q98_A 259 SMEEAFKDADIVYPKS 274 (399)
T ss_dssp CHHHHHTTCSEEEECC
T ss_pred CHHHHhCCCCEEEecC
Confidence 8999999999998875
No 467
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=91.56 E-value=1.1 Score=41.93 Aligned_cols=95 Identities=15% Similarity=0.149 Sum_probs=62.2
Q ss_pred cCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCcCCHHhhh---ccCCEE
Q 021218 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI---SGSDLV 182 (316)
Q Consensus 108 l~G~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~~~e~i---~~ADIV 182 (316)
-+| ++|.|+| .|.+|...++.++.. |.+|+... + ++..+.+++.|.... +....+..+.+ ...|+|
T Consensus 182 ~~g-~~VlV~Ga~G~vG~~~~qla~~~------Ga~Vi~~~-~-~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~v 252 (375)
T 2vn8_A 182 CTG-KRVLILGASGGVGTFAIQVMKAW------DAHVTAVC-S-QDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFI 252 (375)
T ss_dssp CTT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEE-C-GGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEE
T ss_pred CCC-CEEEEECCCCHHHHHHHHHHHhC------CCEEEEEe-C-hHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEE
Confidence 367 8999999 799999999999998 88876554 3 355777888885310 11112333323 357998
Q ss_pred EEcccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 183 LLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 183 iLavp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
+-++.... ..+++....++++..++.+++
T Consensus 253 id~~g~~~--~~~~~~~~~l~~~G~iv~~g~ 281 (375)
T 2vn8_A 253 LDNVGGST--ETWAPDFLKKWSGATYVTLVT 281 (375)
T ss_dssp EESSCTTH--HHHGGGGBCSSSCCEEEESCC
T ss_pred EECCCChh--hhhHHHHHhhcCCcEEEEeCC
Confidence 88887542 123455566777777666554
No 468
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=91.50 E-value=0.96 Score=44.30 Aligned_cols=98 Identities=17% Similarity=0.156 Sum_probs=67.2
Q ss_pred cccCCCCEEEEEcccc----------hHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC-------------Cc
Q 021218 106 DAFNGINQIGVIGWGS----------QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-------------GF 162 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~----------mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~-------------G~ 162 (316)
..++| ++|+|.|+-- -...+++.|.+. |.+|.+++..-.. .+..... ++
T Consensus 325 ~~~~~-~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~------g~~v~~~DP~~~~-~~~~~~~~~~~~~~~~~~~~~~ 396 (467)
T 2q3e_A 325 NTVTD-KKIAILGFAFKKDTGDTRESSSIYISKYLMDE------GAHLHIYDPKVPR-EQIVVDLSHPGVSEDDQVSRLV 396 (467)
T ss_dssp TCCTT-CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHT------TCEEEEECSSSCH-HHHHHHHCC------CHHHHHE
T ss_pred cccCC-CEEEEEeeccCCCCcchhhChHHHHHHHHHHC------CCEEEEEcCccCH-HHHhhhhccccccccccccCce
Confidence 35789 9999999753 566778888887 8888777654221 1110111 12
Q ss_pred eecCCCcCCHHhhhccCCEEEEcccCchHHH-HHHHHHhcCCCCcEEEEeCCch
Q 021218 163 TEENGTLGDIYETISGSDLVLLLISDAAQAD-NYEKIFSCMKPNSILGLSHGFL 215 (316)
Q Consensus 163 ~~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~ei~~~mk~gaiLid~aGv~ 215 (316)
.. ..+..|+++++|.|++++.-.+... -++++...|+...+|+|..++.
T Consensus 397 ~~----~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~~ 446 (467)
T 2q3e_A 397 TI----SKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVL 446 (467)
T ss_dssp EE----CSSHHHHHTTCSEEEECSCCGGGGGSCHHHHHHHSCSSCEEEESSCTT
T ss_pred ee----cCCHHHHHhCCcEEEEecCChhhhcCCHHHHHHhcCCCCEEEeCCCcC
Confidence 21 2467889999999999999887765 3557777787766688987753
No 469
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=91.45 E-value=0.66 Score=40.26 Aligned_cols=45 Identities=22% Similarity=0.174 Sum_probs=35.9
Q ss_pred ccccccccccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCC
Q 021218 99 DLFNLLPDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG 150 (316)
Q Consensus 99 w~F~~~~~~l~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~ 150 (316)
|.+...+..++| |++-|.|. |-||.++++.|.+. |.+|++..|+.
T Consensus 3 ~~~~~~~~~l~~-k~vlITGas~gIG~~ia~~l~~~------G~~V~~~~r~~ 48 (247)
T 3i1j_A 3 FDYSAHPELLKG-RVILVTGAARGIGAAAARAYAAH------GASVVLLGRTE 48 (247)
T ss_dssp CCCCCCTTTTTT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CCCCCCCccCCC-CEEEEeCCCChHHHHHHHHHHHC------CCEEEEEecCH
Confidence 333333577899 99999995 79999999999998 99988777653
No 470
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=91.42 E-value=1 Score=44.53 Aligned_cols=94 Identities=10% Similarity=0.100 Sum_probs=65.1
Q ss_pred ccCCCCEEEEEccc----------chHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH-C------------Cce
Q 021218 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-A------------GFT 163 (316)
Q Consensus 107 ~l~G~kkIGIIG~G----------~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~-~------------G~~ 163 (316)
.++| ++|+|.|+- +-...+++.|.+. |.+|.+++..-. +.+++ + .+.
T Consensus 325 ~~~~-~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~------g~~v~~~DP~~~---~~~~~~~~~~~~~~~~~~~~~~ 394 (478)
T 2y0c_A 325 DLTG-RTFAIWGLAFKPNTDDMREAPSRELIAELLSR------GARIAAYDPVAQ---EEARRVIALDLADHPSWLERLS 394 (478)
T ss_dssp CCTT-CEEEEECCSSSSSCCCCTTCHHHHHHHHHHHT------TCEEEEECTTTH---HHHHHHHHHHTTTCHHHHTTEE
T ss_pred cCCC-CEEEEEecccCCCCCccccChHHHHHHHHHHC------CCEEEEECCCcc---HHHHHhhcccccccccccccee
Confidence 6789 999999963 2445667777777 888877765422 12211 1 233
Q ss_pred ecCCCcCCHHhhhccCCEEEEcccCchHHH-HHHHHHhcCCCCcEEEEeCCch
Q 021218 164 EENGTLGDIYETISGSDLVLLLISDAAQAD-NYEKIFSCMKPNSILGLSHGFL 215 (316)
Q Consensus 164 ~~~~t~~~~~e~i~~ADIViLavp~~~~~~-vi~ei~~~mk~gaiLid~aGv~ 215 (316)
. ..+.+++++++|.|++++.-.+... -++++.+.|+. .+|+|..++.
T Consensus 395 ~----~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~-~~i~D~r~~~ 442 (478)
T 2y0c_A 395 F----VDDEAQAARDADALVIVTEWKIFKSPDFVALGRLWKT-PVIFDGRNLY 442 (478)
T ss_dssp E----CSSHHHHTTTCSEEEECSCCGGGGSCCHHHHHTTCSS-CEEEESSCCS
T ss_pred e----cCCHHHHHhCCCEEEEecCChHhhccCHHHHHhhcCC-CEEEECCCCC
Confidence 1 3477889999999999999887655 34567777764 7889998764
No 471
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=91.38 E-value=0.35 Score=47.53 Aligned_cols=79 Identities=14% Similarity=0.072 Sum_probs=48.6
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHh-hhhhhcCCcEEEEEecC----------CcccH-HHHHHCCceec--CCCcCC
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRD-SLAEAKSDIVVKVGLRK----------GSRSF-AEARAAGFTEE--NGTLGD 171 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~-~~~~~g~G~~Vivg~r~----------~~~s~-~~A~~~G~~~~--~~t~~~ 171 (316)
.+++| +++.|.|+|++|...++.|.+ . |.+|+...+. +.... +...+.|-..+ +....+
T Consensus 205 ~~l~g-~~vaVqG~GnVG~~~a~~L~e~~------GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~ 277 (415)
T 2tmg_A 205 IDPKK-ATVAVQGFGNVGQFAALLISQEL------GSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERIT 277 (415)
T ss_dssp CCTTT-CEEEEECCSHHHHHHHHHHHHTT------CCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEEC
T ss_pred CCcCC-CEEEEECCcHHHHHHHHHHHHhc------CCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcC
Confidence 47999 999999999999999999988 7 8877633332 11112 22233331100 000113
Q ss_pred HHhhh-ccCCEEEEcccCchH
Q 021218 172 IYETI-SGSDLVLLLISDAAQ 191 (316)
Q Consensus 172 ~~e~i-~~ADIViLavp~~~~ 191 (316)
.++++ .+||+++-|...+.+
T Consensus 278 ~~eil~~~~DIliP~A~~n~i 298 (415)
T 2tmg_A 278 NEELLELDVDILVPAALEGAI 298 (415)
T ss_dssp HHHHTTCSCSEEEECSSTTSB
T ss_pred chhhhcCCCcEEEecCCcCcc
Confidence 44544 378988888776554
No 472
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.34 E-value=0.39 Score=44.44 Aligned_cols=93 Identities=17% Similarity=0.144 Sum_probs=61.7
Q ss_pred cCCCCEEEEEccc-chHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCcCCHHhhh------ccC
Q 021218 108 FNGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGS 179 (316)
Q Consensus 108 l~G~kkIGIIG~G-~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~~~e~i------~~A 179 (316)
-+| ++|.|+|.| .+|...++.++.. |.+|+...++ ++..+.+++.|.... +....+..+.+ ...
T Consensus 143 ~~g-~~VlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 143 QRN-DVLLVNACGSAIGHLFAQLSQIL------NFRLIAVTRN-NKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp CTT-CEEEESSTTSHHHHHHHHHHHHH------TCEEEEEESS-STTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCC-CEEEEeCCccHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCC
Confidence 357 999999987 8999999999998 9887766654 455677777775310 11112333322 257
Q ss_pred CEEEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 180 DIViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
|+|+-++...... +....++++..++.++
T Consensus 215 Dvvid~~g~~~~~----~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 215 DAAIDSIGGPDGN----ELAFSLRPNGHFLTIG 243 (340)
T ss_dssp EEEEESSCHHHHH----HHHHTEEEEEEEEECC
T ss_pred cEEEECCCChhHH----HHHHHhcCCCEEEEEe
Confidence 9999988755432 2335677777766554
No 473
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=91.33 E-value=0.35 Score=46.61 Aligned_cols=70 Identities=10% Similarity=0.034 Sum_probs=49.1
Q ss_pred ccCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCC----cccHHH----HHHCCceecCCCcCCHHhhhc
Q 021218 107 AFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAGFTEENGTLGDIYETIS 177 (316)
Q Consensus 107 ~l~G~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~----~~s~~~----A~~~G~~~~~~t~~~~~e~i~ 177 (316)
.|+| .||++|| .+++..|++..+... |+++.+...++ +...+. +++.|.... ...+++ +++
T Consensus 150 ~l~g-lkva~vGD~~rva~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~--~~~d~~-av~ 219 (355)
T 4a8p_A 150 KLED-CKVVFVGDATQVCFSLGLITTKM------GMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFL--VTDDAS-SVE 219 (355)
T ss_dssp CGGG-CEEEEESCCCHHHHHHHHHHHHT------TCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEE--EECCGG-GGT
T ss_pred CCCC-CEEEEECCCchhHHHHHHHHHHc------CCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEE--EECCHH-HHc
Confidence 5888 9999999 468999999999998 99887775442 112222 344553211 145788 999
Q ss_pred cCCEEEEcc
Q 021218 178 GSDLVLLLI 186 (316)
Q Consensus 178 ~ADIViLav 186 (316)
++|+|..-+
T Consensus 220 ~aDVVytd~ 228 (355)
T 4a8p_A 220 GADFLYTDV 228 (355)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEecc
Confidence 999999743
No 474
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=91.26 E-value=1.8 Score=40.28 Aligned_cols=71 Identities=20% Similarity=0.246 Sum_probs=46.6
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH--CCceecCCC-cCC---HHhhhccCCEEEE
Q 021218 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA--AGFTEENGT-LGD---IYETISGSDLVLL 184 (316)
Q Consensus 112 kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~--~G~~~~~~t-~~~---~~e~i~~ADIViL 184 (316)
|+|.|.| .|.+|.++++.|.+. |++|++..|+.++....... .++...... ..+ +.++++++|+||.
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~ 79 (352)
T 1xgk_A 6 KTIAVVGATGRQGASLIRVAAAV------GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFI 79 (352)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHT------TCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC------CCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEE
Confidence 7899999 699999999999988 88888777765432111111 133211111 222 4567889999997
Q ss_pred cccC
Q 021218 185 LISD 188 (316)
Q Consensus 185 avp~ 188 (316)
+...
T Consensus 80 ~a~~ 83 (352)
T 1xgk_A 80 NTTS 83 (352)
T ss_dssp CCCS
T ss_pred cCCC
Confidence 7654
No 475
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=91.22 E-value=0.71 Score=42.99 Aligned_cols=94 Identities=9% Similarity=0.017 Sum_probs=58.8
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcE-EEEEecCCcccHHHHHHCC--ceec--CC-CcCCHHhhh-----
Q 021218 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIV-VKVGLRKGSRSFAEARAAG--FTEE--NG-TLGDIYETI----- 176 (316)
Q Consensus 108 l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~-Vivg~r~~~~s~~~A~~~G--~~~~--~~-t~~~~~e~i----- 176 (316)
-+| .+|.|+|.|.+|...++.++.. |.+ |++. +.+++..+.+++.+ .... +. ...+..+.+
T Consensus 178 ~~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~-~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~ 249 (363)
T 3m6i_A 178 RLG-DPVLICGAGPIGLITMLCAKAA------GACPLVIT-DIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFG 249 (363)
T ss_dssp CTT-CCEEEECCSHHHHHHHHHHHHT------TCCSEEEE-ESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTS
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEE-CCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhC
Confidence 357 9999999999999999999998 886 5444 44455566666652 1100 00 001122222
Q ss_pred -ccCCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 177 -SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 177 -~~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
...|+|+-++.... .++.....++++-.++.++
T Consensus 250 g~g~Dvvid~~g~~~---~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 250 GIEPAVALECTGVES---SIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp SCCCSEEEECSCCHH---HHHHHHHHSCTTCEEEECC
T ss_pred CCCCCEEEECCCChH---HHHHHHHHhcCCCEEEEEc
Confidence 25899999887542 3455556677877766553
No 476
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=91.21 E-value=0.71 Score=43.82 Aligned_cols=96 Identities=14% Similarity=0.111 Sum_probs=54.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC-CcccHHHHHH----CCce-----e------cCC---C---c
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARA----AGFT-----E------ENG---T---L 169 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~-~~~s~~~A~~----~G~~-----~------~~~---t---~ 169 (316)
.+|||+|+|.+|..+.+.|...- +.+++|+...+. +.+......+ +|.- . .++ . .
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~---~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~ 77 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERK---NPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAE 77 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCC---CCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEec
Confidence 47999999999999999886540 114676544432 1111111111 1100 0 000 0 1
Q ss_pred CCHHhh-hc--cCCEEEEcccCchHHHHHHHHHhcCCCCc--EEEEeCC
Q 021218 170 GDIYET-IS--GSDLVLLLISDAAQADNYEKIFSCMKPNS--ILGLSHG 213 (316)
Q Consensus 170 ~~~~e~-i~--~ADIViLavp~~~~~~vi~ei~~~mk~ga--iLid~aG 213 (316)
.+.+++ .. ++|+|+.|+|.....+..++.++ .|+ +|++.++
T Consensus 78 ~dp~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~---aGakkvVId~~a 123 (332)
T 1hdg_O 78 PDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQ---AGAKKVIITAPA 123 (332)
T ss_dssp SSGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHH---TTCSEEEESSCC
T ss_pred CChHHCcccccCCCEEEECCccchhHHHHHHHHH---cCCcEEEEeCCC
Confidence 133332 12 79999999998887776665543 466 7777654
No 477
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=91.16 E-value=0.9 Score=36.87 Aligned_cols=91 Identities=13% Similarity=0.067 Sum_probs=54.7
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH----CCce---ecCCCcCCHHhhh----
Q 021218 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA----AGFT---EENGTLGDIYETI---- 176 (316)
Q Consensus 108 l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~----~G~~---~~~~t~~~~~e~i---- 176 (316)
-+| ++|.-||+|. |. ++..+.+.+ .+.+ +++.+.++...+.+++ .|.. .. ..+..+.+
T Consensus 24 ~~~-~~vldiG~G~-G~-~~~~l~~~~----~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~---~~d~~~~~~~~~ 92 (178)
T 3hm2_A 24 KPH-ETLWDIGGGS-GS-IAIEWLRST----PQTT-AVCFEISEERRERILSNAINLGVSDRIAV---QQGAPRAFDDVP 92 (178)
T ss_dssp CTT-EEEEEESTTT-TH-HHHHHHTTS----SSEE-EEEECSCHHHHHHHHHHHHTTTCTTSEEE---ECCTTGGGGGCC
T ss_pred cCC-CeEEEeCCCC-CH-HHHHHHHHC----CCCe-EEEEeCCHHHHHHHHHHHHHhCCCCCEEE---ecchHhhhhccC
Confidence 357 8999999997 43 333333320 1234 5677776666666553 2321 10 11221222
Q ss_pred ccCCEEEEcccCchHHHHHHHHHhcCCCCcEEEE
Q 021218 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGL 210 (316)
Q Consensus 177 ~~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid 210 (316)
...|+|++..+... .++++++...+|||..++.
T Consensus 93 ~~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~l~~ 125 (178)
T 3hm2_A 93 DNPDVIFIGGGLTA-PGVFAAAWKRLPVGGRLVA 125 (178)
T ss_dssp SCCSEEEECC-TTC-TTHHHHHHHTCCTTCEEEE
T ss_pred CCCCEEEECCcccH-HHHHHHHHHhcCCCCEEEE
Confidence 56899998776655 5688899999999987664
No 478
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=91.08 E-value=1.1 Score=41.81 Aligned_cols=94 Identities=10% Similarity=0.046 Sum_probs=61.5
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcc---cHHHHHHCCceec-CCC---cCCHHhhhc---
Q 021218 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR---SFAEARAAGFTEE-NGT---LGDIYETIS--- 177 (316)
Q Consensus 109 ~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~---s~~~A~~~G~~~~-~~t---~~~~~e~i~--- 177 (316)
+| .+|.|+|. |.+|...++.++.. |.++++..+..++ ..+.+++.|...- +.. ..+..+...
T Consensus 167 ~g-~~VlV~Ga~G~vG~~aiqlak~~------Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~ 239 (357)
T 1zsy_A 167 PG-DSVIQNASNSGVGQAVIQIAAAL------GLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMP 239 (357)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHH------TCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSC
T ss_pred CC-CEEEEeCCcCHHHHHHHHHHHHc------CCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCC
Confidence 57 89999997 99999999999998 9877766655432 3467778885320 000 011222222
Q ss_pred cCCEEEEcccCchHHHHHHHHHhcCCCCcEEEEeCC
Q 021218 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (316)
Q Consensus 178 ~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid~aG 213 (316)
..|+|+-++..... .+....++++-.++.+++
T Consensus 240 ~~Dvvid~~g~~~~----~~~~~~l~~~G~iv~~G~ 271 (357)
T 1zsy_A 240 QPRLALNCVGGKSS----TELLRQLARGGTMVTYGG 271 (357)
T ss_dssp CCSEEEESSCHHHH----HHHHTTSCTTCEEEECCC
T ss_pred CceEEEECCCcHHH----HHHHHhhCCCCEEEEEec
Confidence 37999998874332 345677888877776543
No 479
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=90.95 E-value=0.45 Score=42.03 Aligned_cols=38 Identities=16% Similarity=0.111 Sum_probs=32.8
Q ss_pred cccCCCCEEEEEcc-cc-hHHHHHHHHHhhhhhhcCCcEEEEEecCC
Q 021218 106 DAFNGINQIGVIGW-GS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKG 150 (316)
Q Consensus 106 ~~l~G~kkIGIIG~-G~-mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~ 150 (316)
..++| |++-|.|. |. ||.++++.|.+. |.+|++..|+.
T Consensus 18 ~~l~~-k~vlITGasg~GIG~~~a~~l~~~------G~~V~~~~r~~ 57 (266)
T 3o38_A 18 GLLKG-KVVLVTAAAGTGIGSTTARRALLE------GADVVISDYHE 57 (266)
T ss_dssp STTTT-CEEEESSCSSSSHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred cCCCC-CEEEEECCCCCchHHHHHHHHHHC------CCEEEEecCCH
Confidence 56889 99999998 85 999999999998 99988777654
No 480
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=90.92 E-value=1.3 Score=39.14 Aligned_cols=97 Identities=15% Similarity=0.160 Sum_probs=59.3
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH----CCceec-CCCcCCHHhhhc---
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA----AGFTEE-NGTLGDIYETIS--- 177 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~----~G~~~~-~~t~~~~~e~i~--- 177 (316)
...++ ++|--||+|. |......++.. . .+.+ +++.+.++...+.|++ .|+... .-...+..+.+.
T Consensus 60 ~~~~~-~~VLdiG~G~-G~~~~~la~~~-~---~~~~-v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~ 132 (248)
T 3tfw_A 60 RLTQA-KRILEIGTLG-GYSTIWMAREL-P---ADGQ-LLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLG 132 (248)
T ss_dssp HHHTC-SEEEEECCTT-SHHHHHHHTTS-C---TTCE-EEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCC
T ss_pred hhcCC-CEEEEecCCc-hHHHHHHHHhC-C---CCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcC
Confidence 34467 9999999997 43333333332 1 0224 4566666655555443 243200 001245555433
Q ss_pred ---cCCEEEEcccCchHHHHHHHHHhcCCCCcEEE
Q 021218 178 ---GSDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (316)
Q Consensus 178 ---~ADIViLavp~~~~~~vi~ei~~~mk~gaiLi 209 (316)
..|+|++..+......+++++...||||.+|+
T Consensus 133 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv 167 (248)
T 3tfw_A 133 ECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLII 167 (248)
T ss_dssp SCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEE
T ss_pred CCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEE
Confidence 68999998887777789999999999999766
No 481
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=90.89 E-value=0.35 Score=44.98 Aligned_cols=76 Identities=16% Similarity=0.095 Sum_probs=49.2
Q ss_pred cccCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCC-cEEEEEecCCcccHHHHH-HCCceecCCCcCC---HHhhhccC
Q 021218 106 DAFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEAR-AAGFTEENGTLGD---IYETISGS 179 (316)
Q Consensus 106 ~~l~G~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G-~~Vivg~r~~~~s~~~A~-~~G~~~~~~t~~~---~~e~i~~A 179 (316)
..++| |+|.|.| .|.+|..+++.|.+. | ++|++..|......+... ..++........+ +.++++++
T Consensus 28 ~~~~~-~~ilVtGatG~iG~~l~~~L~~~------g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~ 100 (377)
T 2q1s_A 28 SKLAN-TNVMVVGGAGFVGSNLVKRLLEL------GVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEY 100 (377)
T ss_dssp GGGTT-CEEEEETTTSHHHHHHHHHHHHT------TCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCC
T ss_pred HHhCC-CEEEEECCccHHHHHHHHHHHHc------CCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCC
Confidence 45788 9999999 599999999999998 9 888877665432211100 1122110111223 44567899
Q ss_pred CEEEEcccC
Q 021218 180 DLVLLLISD 188 (316)
Q Consensus 180 DIViLavp~ 188 (316)
|+||-+...
T Consensus 101 d~Vih~A~~ 109 (377)
T 2q1s_A 101 DYVFHLATY 109 (377)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCc
Confidence 999988754
No 482
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=90.83 E-value=0.41 Score=45.45 Aligned_cols=89 Identities=12% Similarity=0.087 Sum_probs=54.8
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCC-------------------cccH---HHHHHC-
Q 021218 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-------------------SRSF---AEARAA- 160 (316)
Q Consensus 105 ~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r~~-------------------~~s~---~~A~~~- 160 (316)
...|++ .+|.|||+|-+|..++++|... |+ ++.+.+... .+.. +...+.
T Consensus 31 q~~L~~-~~VlivG~GGlG~~ia~~La~~------Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~ln 103 (346)
T 1y8q_A 31 QKRLRA-SRVLLVGLKGLGAEIAKNLILA------GVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLN 103 (346)
T ss_dssp HHHHHT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTC
T ss_pred HHHHhC-CeEEEECCCHHHHHHHHHHHHc------CCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHC
Confidence 567888 9999999999999999999998 76 555553210 1111 111111
Q ss_pred -Cceec--CCCc-CCHHhhhccCCEEEEcccCchHHHHHHHHHh
Q 021218 161 -GFTEE--NGTL-GDIYETISGSDLVLLLISDAAQADNYEKIFS 200 (316)
Q Consensus 161 -G~~~~--~~t~-~~~~e~i~~ADIViLavp~~~~~~vi~ei~~ 200 (316)
++... .... ...++.+++.|+||.++-.......+++...
T Consensus 104 p~v~v~~~~~~~~~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~ 147 (346)
T 1y8q_A 104 PMVDVKVDTEDIEKKPESFFTQFDAVCLTCCSRDVIVKVDQICH 147 (346)
T ss_dssp TTSEEEEECSCGGGCCHHHHTTCSEEEEESCCHHHHHHHHHHHH
T ss_pred CCeEEEEEecccCcchHHHhcCCCEEEEcCCCHHHHHHHHHHHH
Confidence 11110 0001 1235778999999998766655556665443
No 483
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=90.77 E-value=0.66 Score=41.30 Aligned_cols=92 Identities=17% Similarity=0.169 Sum_probs=59.6
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH----CCceecCCCcCCHHhhh--ccCCEE
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA----AGFTEENGTLGDIYETI--SGSDLV 182 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~----~G~~~~~~t~~~~~e~i--~~ADIV 182 (316)
+| ++|--||+|. | .++..+.+. |.+ +++.+.++...+.+++ .|... .-...+..+.+ ...|+|
T Consensus 120 ~~-~~VLDiGcG~-G-~l~~~la~~------g~~-v~gvDi~~~~v~~a~~n~~~~~~~v-~~~~~d~~~~~~~~~fD~V 188 (254)
T 2nxc_A 120 PG-DKVLDLGTGS-G-VLAIAAEKL------GGK-ALGVDIDPMVLPQAEANAKRNGVRP-RFLEGSLEAALPFGPFDLL 188 (254)
T ss_dssp TT-CEEEEETCTT-S-HHHHHHHHT------TCE-EEEEESCGGGHHHHHHHHHHTTCCC-EEEESCHHHHGGGCCEEEE
T ss_pred CC-CEEEEecCCC-c-HHHHHHHHh------CCe-EEEEECCHHHHHHHHHHHHHcCCcE-EEEECChhhcCcCCCCCEE
Confidence 57 8999999999 3 344455555 664 5676776666655554 34210 00123555433 357999
Q ss_pred EEcccCchHHHHHHHHHhcCCCCcEEEEe
Q 021218 183 LLLISDAAQADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 183 iLavp~~~~~~vi~ei~~~mk~gaiLid~ 211 (316)
+...+.....++++++...+|||..++.+
T Consensus 189 v~n~~~~~~~~~l~~~~~~LkpgG~lils 217 (254)
T 2nxc_A 189 VANLYAELHAALAPRYREALVPGGRALLT 217 (254)
T ss_dssp EEECCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCcHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 98776666667888999999999876654
No 484
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=90.74 E-value=0.15 Score=50.13 Aligned_cols=36 Identities=19% Similarity=0.224 Sum_probs=30.7
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEec
Q 021218 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR 148 (316)
Q Consensus 106 ~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r 148 (316)
.+|+| ++|.|.|.|++|...|+.|.+. |.+|+...+
T Consensus 208 ~~l~g-~~vaVqG~GnVG~~~a~~L~~~------GakvVavsD 243 (421)
T 2yfq_A 208 IKMED-AKIAVQGFGNVGTFTVKNIERQ------GGKVCAIAE 243 (421)
T ss_dssp CCGGG-SCEEEECCSHHHHHHHHHHHHT------TCCEEECCB
T ss_pred CCccC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEEEe
Confidence 47899 9999999999999999999998 887763333
No 485
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=90.73 E-value=1 Score=42.22 Aligned_cols=92 Identities=14% Similarity=0.165 Sum_probs=61.7
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHh-hhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhc-----cCCE
Q 021218 109 NGINQIGVIG-WGSQGPAQAQNLRD-SLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-----GSDL 181 (316)
Q Consensus 109 ~G~kkIGIIG-~G~mG~AlA~~Lr~-~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~-----~ADI 181 (316)
+| .+|.|+| .|.+|...++.++. . |.+|+... .+++..+.+++.|....-....+..+.+. ..|+
T Consensus 171 ~g-~~VlV~Ga~G~vG~~a~qlak~~~------g~~Vi~~~-~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AA-PAILIVGGAGGVGSIAVQIARQRT------DLTVIATA-SRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAF 242 (363)
T ss_dssp SE-EEEEEESTTSHHHHHHHHHHHHHC------CSEEEEEC-SSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHhc------CCEEEEEe-CCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceE
Confidence 58 8999999 99999999999987 5 66765544 44556778888885321001123333332 5799
Q ss_pred EEEcccCchHHHHHHHHHhcCCCCcEEEEe
Q 021218 182 VLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 182 ViLavp~~~~~~vi~ei~~~mk~gaiLid~ 211 (316)
|+-++... ..+++..+.++++-.++.+
T Consensus 243 vid~~g~~---~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFSTTHTD---KHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEECSCHH---HHHHHHHHHSCTTCEEEEC
T ss_pred EEECCCch---hhHHHHHHHhcCCCEEEEE
Confidence 99887743 3455666678887777655
No 486
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=90.70 E-value=1.1 Score=42.94 Aligned_cols=36 Identities=14% Similarity=0.152 Sum_probs=30.1
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEe
Q 021218 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGL 147 (316)
Q Consensus 105 ~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~ 147 (316)
...|++ ++|.|||.|-+|..+|++|... |. ++.+.+
T Consensus 29 ~~kL~~-~~VlIvGaGGlGs~va~~La~a------GVg~ItlvD 65 (340)
T 3rui_A 29 LDIIKN-TKVLLLGAGTLGCYVSRALIAW------GVRKITFVD 65 (340)
T ss_dssp HHHHHT-CEEEEECCSHHHHHHHHHHHHT------TCCEEEEEC
T ss_pred HHHHhC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEec
Confidence 467888 9999999999999999999998 76 455544
No 487
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=90.68 E-value=1.1 Score=40.06 Aligned_cols=39 Identities=10% Similarity=0.088 Sum_probs=32.9
Q ss_pred ccccCCCCEEEEEcc-cc--hHHHHHHHHHhhhhhhcCCcEEEEEecCC
Q 021218 105 PDAFNGINQIGVIGW-GS--QGPAQAQNLRDSLAEAKSDIVVKVGLRKG 150 (316)
Q Consensus 105 ~~~l~G~kkIGIIG~-G~--mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~ 150 (316)
+..++| |++-|.|. |. ||.++|+.|.+. |.+|++..+..
T Consensus 21 M~~l~~-k~vlVTGasg~~GIG~~ia~~l~~~------G~~V~~~~r~~ 62 (280)
T 3nrc_A 21 MGFLAG-KKILITGLLSNKSIAYGIAKAMHRE------GAELAFTYVGQ 62 (280)
T ss_dssp -CTTTT-CEEEECCCCSTTCHHHHHHHHHHHT------TCEEEEEECTT
T ss_pred ccccCC-CEEEEECCCCCCCHHHHHHHHHHHc------CCEEEEeeCch
Confidence 578899 99999995 56 999999999998 99888777764
No 488
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=90.68 E-value=1.4 Score=43.41 Aligned_cols=98 Identities=17% Similarity=0.229 Sum_probs=66.6
Q ss_pred ccCCCCEEEEEccc----------chHHHHHHHHHhhhhhhcCCcEEEEEecCCccc--HHHHHH-CC-------ceecC
Q 021218 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS--FAEARA-AG-------FTEEN 166 (316)
Q Consensus 107 ~l~G~kkIGIIG~G----------~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s--~~~A~~-~G-------~~~~~ 166 (316)
.++| ++|+|.|+- +-...+++.|.+. |.+|.+++..-... .....+ .+ +..
T Consensus 332 ~~~~-~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~------g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~-- 402 (481)
T 2o3j_A 332 TVTD-KKIAIFGFAFKKNTGDTRESSAIHVIKHLMEE------HAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITV-- 402 (481)
T ss_dssp CCTT-CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHT------TCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEE--
T ss_pred ccCC-CeEEEEeeeeCCCCCccccChHHHHHHHHHHC------CCEEEEECCCCCchhhHHHHHhhhccccccCceee--
Confidence 5789 999999963 4556677777777 88877766542211 111211 11 221
Q ss_pred CCcCCHHhhhccCCEEEEcccCchHHH-HHHHHHhcCCCCcEEEEeCCch
Q 021218 167 GTLGDIYETISGSDLVLLLISDAAQAD-NYEKIFSCMKPNSILGLSHGFL 215 (316)
Q Consensus 167 ~t~~~~~e~i~~ADIViLavp~~~~~~-vi~ei~~~mk~gaiLid~aGv~ 215 (316)
+.+..|+++++|.|++++.-.+... -++++...|+...+|+|..++.
T Consensus 403 --~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~~ 450 (481)
T 2o3j_A 403 --ESDPYAAARGAHAIVVLTEWDEFVELNYSQIHNDMQHPAAIFDGRLIL 450 (481)
T ss_dssp --ESSHHHHHTTCSEEEECSCCGGGTTSCHHHHHHHSCSSCEEEESSSCS
T ss_pred --cCCHHHHHcCCCEEEEcCCcHHhhccCHHHHHHhcCCCCEEEECCCCC
Confidence 2467889999999999999877665 3567777788777888988764
No 489
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.53 E-value=0.39 Score=44.04 Aligned_cols=92 Identities=15% Similarity=0.130 Sum_probs=58.3
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceec-CCCcCCHHhhh------ccCC
Q 021218 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (316)
Q Consensus 109 ~G~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~-~~t~~~~~e~i------~~AD 180 (316)
+| +++.|+| .|.+|.+.++.++.. |.+|+...++ ++..+.+++.|.... +....+..+.+ ...|
T Consensus 140 ~g-~~vlV~Ga~ggiG~~~~~~a~~~------G~~V~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D 211 (327)
T 1qor_A 140 PD-EQFLFHAAAGGVGLIACQWAKAL------GAKLIGTVGT-AQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVR 211 (327)
T ss_dssp TT-CEEEESSTTBHHHHHHHHHHHHH------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCce
Confidence 57 9999999 799999999999998 9887666554 444556666664210 11111222222 1478
Q ss_pred EEEEcccCchHHHHHHHHHhcCCCCcEEEEeC
Q 021218 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (316)
Q Consensus 181 IViLavp~~~~~~vi~ei~~~mk~gaiLid~a 212 (316)
+||-++.. +.++...+.++++..++..+
T Consensus 212 ~vi~~~g~----~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 212 VVYDSVGR----DTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp EEEECSCG----GGHHHHHHTEEEEEEEEECC
T ss_pred EEEECCch----HHHHHHHHHhcCCCEEEEEe
Confidence 88888873 23555566677766665543
No 490
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=90.51 E-value=1.6 Score=38.62 Aligned_cols=89 Identities=11% Similarity=0.110 Sum_probs=55.4
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHC----C----ceecCCCcCCHHhhhccCC
Q 021218 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----G----FTEENGTLGDIYETISGSD 180 (316)
Q Consensus 109 ~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~----G----~~~~~~t~~~~~e~i~~AD 180 (316)
+| ++|--||+|. |.-....++.. |.+ +++.+.++...+.+++. | +... ..+..+.-...|
T Consensus 64 ~~-~~vLDiGcG~-G~~~~~l~~~~------~~~-v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~---~~d~~~~~~~fD 131 (287)
T 1kpg_A 64 PG-MTLLDVGCGW-GATMMRAVEKY------DVN-VVGLTLSKNQANHVQQLVANSENLRSKRVL---LAGWEQFDEPVD 131 (287)
T ss_dssp TT-CEEEEETCTT-SHHHHHHHHHH------CCE-EEEEESCHHHHHHHHHHHHTCCCCSCEEEE---ESCGGGCCCCCS
T ss_pred Cc-CEEEEECCcc-cHHHHHHHHHc------CCE-EEEEECCHHHHHHHHHHHHhcCCCCCeEEE---ECChhhCCCCee
Confidence 57 8999999998 33322333355 665 45666666555555442 2 2110 234444336789
Q ss_pred EEEEc-----ccCchHHHHHHHHHhcCCCCcEEE
Q 021218 181 LVLLL-----ISDAAQADNYEKIFSCMKPNSILG 209 (316)
Q Consensus 181 IViLa-----vp~~~~~~vi~ei~~~mk~gaiLi 209 (316)
+|+.. +++....++++++...||||..++
T Consensus 132 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 165 (287)
T 1kpg_A 132 RIVSIGAFEHFGHERYDAFFSLAHRLLPADGVML 165 (287)
T ss_dssp EEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEE
T ss_pred EEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEE
Confidence 99875 444556678999999999998765
No 491
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=90.50 E-value=0.45 Score=41.93 Aligned_cols=39 Identities=23% Similarity=0.185 Sum_probs=32.8
Q ss_pred cccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCc
Q 021218 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS 151 (316)
Q Consensus 106 ~~l~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~ 151 (316)
..|+| |++-|.|. |-||.++|+.|.+. |.+|++..++.+
T Consensus 2 ~~l~g-k~vlVTGas~gIG~a~a~~l~~~------G~~V~~~~r~~~ 41 (247)
T 3rwb_A 2 ERLAG-KTALVTGAAQGIGKAIAARLAAD------GATVIVSDINAE 41 (247)
T ss_dssp CTTTT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEECSCHH
T ss_pred CCcCC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 56889 99999995 68999999999998 999887766543
No 492
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=90.50 E-value=0.32 Score=44.38 Aligned_cols=76 Identities=17% Similarity=0.158 Sum_probs=45.6
Q ss_pred ccccCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH-CCceecCCCcCC---HHhhhcc-
Q 021218 105 PDAFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTEENGTLGD---IYETISG- 178 (316)
Q Consensus 105 ~~~l~G~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~-~G~~~~~~t~~~---~~e~i~~- 178 (316)
...++| |+|.|.| .|-+|.++++.|.+. |++|++..|......+...+ .++......+.+ +.+++++
T Consensus 16 ~~~~~~-~~vlVTGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~ 88 (333)
T 2q1w_A 16 PRGSHM-KKVFITGICGQIGSHIAELLLER------GDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDL 88 (333)
T ss_dssp -----C-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred eecCCC-CEEEEeCCccHHHHHHHHHHHHC------CCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhcc
Confidence 356778 9999998 799999999999998 99888777654321111100 122110111223 3456777
Q ss_pred -CCEEEEccc
Q 021218 179 -SDLVLLLIS 187 (316)
Q Consensus 179 -ADIViLavp 187 (316)
.|+||-+..
T Consensus 89 ~~D~vih~A~ 98 (333)
T 2q1w_A 89 QPDAVVHTAA 98 (333)
T ss_dssp CCSEEEECCC
T ss_pred CCcEEEECce
Confidence 999998764
No 493
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=90.40 E-value=0.3 Score=45.33 Aligned_cols=69 Identities=12% Similarity=0.085 Sum_probs=42.3
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCc-------EEEEEecCCc-c-cHHHHH--HC---CceecCCCcCCHHhhh
Q 021218 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI-------VVKVGLRKGS-R-SFAEAR--AA---GFTEENGTLGDIYETI 176 (316)
Q Consensus 112 kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~-------~Vivg~r~~~-~-s~~~A~--~~---G~~~~~~t~~~~~e~i 176 (316)
+||.|+|. |.+|..++..|... |+ +|.+.++... . ....+. .. .+..+-....+..+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~------g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~ 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAG------EMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAF 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT------TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC------CCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHh
Confidence 68999996 99999999999887 64 6665544321 1 111111 11 1110000024677889
Q ss_pred ccCCEEEEcc
Q 021218 177 SGSDLVLLLI 186 (316)
Q Consensus 177 ~~ADIViLav 186 (316)
+++|+||.+.
T Consensus 79 ~~~D~Vih~A 88 (327)
T 1y7t_A 79 KDADYALLVG 88 (327)
T ss_dssp TTCSEEEECC
T ss_pred CCCCEEEECC
Confidence 9999999874
No 494
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=90.30 E-value=0.93 Score=36.89 Aligned_cols=91 Identities=15% Similarity=0.162 Sum_probs=58.8
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHH----CCc----eecCCCcCCHHhhh--
Q 021218 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA----AGF----TEENGTLGDIYETI-- 176 (316)
Q Consensus 107 ~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~----~G~----~~~~~t~~~~~e~i-- 176 (316)
.-+| ++|--||+|. | .++..+.+. +.+ +++.+.++...+.+++ .|. ... ..+..+.+
T Consensus 31 ~~~~-~~vldiG~G~-G-~~~~~l~~~------~~~-v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~---~~d~~~~~~~ 97 (192)
T 1l3i_A 31 PGKN-DVAVDVGCGT-G-GVTLELAGR------VRR-VYAIDRNPEAISTTEMNLQRHGLGDNVTLM---EGDAPEALCK 97 (192)
T ss_dssp CCTT-CEEEEESCTT-S-HHHHHHHTT------SSE-EEEEESCHHHHHHHHHHHHHTTCCTTEEEE---ESCHHHHHTT
T ss_pred CCCC-CEEEEECCCC-C-HHHHHHHHh------cCE-EEEEECCHHHHHHHHHHHHHcCCCcceEEE---ecCHHHhccc
Confidence 3467 8999999998 3 444455555 434 5566666655555544 232 110 23554433
Q ss_pred -ccCCEEEEcccCchHHHHHHHHHhcCCCCcEEEE
Q 021218 177 -SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGL 210 (316)
Q Consensus 177 -~~ADIViLavp~~~~~~vi~ei~~~mk~gaiLid 210 (316)
...|+|+..-+.....++++++...++||..++.
T Consensus 98 ~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~ 132 (192)
T 1l3i_A 98 IPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIV 132 (192)
T ss_dssp SCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEE
T ss_pred CCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEE
Confidence 3579999887766677789999999999877654
No 495
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=90.27 E-value=1.2 Score=39.46 Aligned_cols=40 Identities=20% Similarity=0.186 Sum_probs=32.9
Q ss_pred cccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCcc
Q 021218 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR 152 (316)
Q Consensus 106 ~~l~G~kkIGIIG~-G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~ 152 (316)
..|+| |++-|.|. |-||.++|+.|.+. |.+|++..+++.+
T Consensus 4 ~~l~~-k~vlVTGas~GIG~aia~~la~~------G~~V~~~~~~~~~ 44 (259)
T 3edm_A 4 QRFTN-RTIVVAGAGRDIGRACAIRFAQE------GANVVLTYNGAAE 44 (259)
T ss_dssp CTTTT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECSSCH
T ss_pred cCCCC-CEEEEECCCchHHHHHHHHHHHC------CCEEEEEcCCCHH
Confidence 46789 99999994 58999999999998 9998877565543
No 496
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=90.22 E-value=0.56 Score=41.48 Aligned_cols=39 Identities=15% Similarity=0.097 Sum_probs=32.9
Q ss_pred cccCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCc
Q 021218 106 DAFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS 151 (316)
Q Consensus 106 ~~l~G~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~ 151 (316)
..++| |++-|.| .|-||.++++.|.+. |.+|++..++.+
T Consensus 4 ~~l~~-k~vlVTGas~gIG~~ia~~l~~~------G~~V~~~~r~~~ 43 (259)
T 4e6p_A 4 KRLEG-KSALITGSARGIGRAFAEAYVRE------GATVAIADIDIE 43 (259)
T ss_dssp CTTTT-CEEEEETCSSHHHHHHHHHHHHT------TCEEEEEESCHH
T ss_pred ccCCC-CEEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 56789 9999999 578999999999998 999887776543
No 497
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=90.21 E-value=0.61 Score=40.77 Aligned_cols=73 Identities=15% Similarity=0.097 Sum_probs=47.8
Q ss_pred ccCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCC--ceecCCCcCC---HHhhhc---
Q 021218 107 AFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG--FTEENGTLGD---IYETIS--- 177 (316)
Q Consensus 107 ~l~G~kkIGIIG-~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G--~~~~~~t~~~---~~e~i~--- 177 (316)
.++| |++-|.| .|-+|.++++.|.+. |.+|++..|+.++..+...+.+ +......+.+ .+++++
T Consensus 9 ~~~~-k~vlVTGasggiG~~~a~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (265)
T 2o23_A 9 SVKG-LVAVITGGASGLGLATAERLVGQ------GASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAK 81 (265)
T ss_dssp CCTT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCC-CEEEEECCCChHHHHHHHHHHHC------CCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 5788 9999999 679999999999998 9998888776554333333322 1100011223 233444
Q ss_pred ----cCCEEEEcc
Q 021218 178 ----GSDLVLLLI 186 (316)
Q Consensus 178 ----~ADIViLav 186 (316)
..|+||.+.
T Consensus 82 ~~~g~id~li~~A 94 (265)
T 2o23_A 82 GKFGRVDVAVNCA 94 (265)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHCCCCCEEEECC
Confidence 789999875
No 498
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=90.10 E-value=0.91 Score=42.09 Aligned_cols=88 Identities=14% Similarity=0.178 Sum_probs=55.7
Q ss_pred cccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCcccHHHHHHCCceecCCCcCCHHhhhccC
Q 021218 100 LFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGS 179 (316)
Q Consensus 100 ~F~~~~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~~~~s~~~A~~~G~~~~~~t~~~~~e~i~~A 179 (316)
.|.+.....+| ++|++||+- + ....+++. +.++.+.+++.. .|... ....++++++|
T Consensus 131 ~~~~~~~~~~g-~kV~vIG~f---P-~i~~~~~~------~~~l~V~E~~p~--------~g~~p----~~~~~~~lp~~ 187 (270)
T 3l5o_A 131 PFIMSQNEVKG-KKVGVVGHF---P-HLESLLEP------ICDLSILEWSPE--------EGDYP----LPASEFILPEC 187 (270)
T ss_dssp HHHHTTTTTTT-SEEEEESCC---T-THHHHHTT------TSEEEEEESSCC--------TTCEE----GGGHHHHGGGC
T ss_pred chhhhhcccCC-CEEEEECCc---h-hHHHHHhc------CCCEEEEECCCC--------CCCCC----hhHHHHhhccC
Confidence 35444577889 999999975 2 34456666 678888887642 23321 22456799999
Q ss_pred CEEEEcccCchHHHHHHHHHhcCCCCcEEEEe
Q 021218 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (316)
Q Consensus 180 DIViLavp~~~~~~vi~ei~~~mk~gaiLid~ 211 (316)
|+|++.-. +-..+.++.++++.++.+.++++
T Consensus 188 D~viiTgs-tlvN~Tl~~lL~~~~~a~~vvl~ 218 (270)
T 3l5o_A 188 DYVYITCA-SVVDKTLPRLLELSRNARRITLV 218 (270)
T ss_dssp SEEEEETH-HHHHTCHHHHHHHTTTSSEEEEE
T ss_pred CEEEEEee-hhhcCCHHHHHhhCCCCCEEEEE
Confidence 99988643 11223556677777666655543
No 499
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=90.05 E-value=0.56 Score=44.61 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=30.5
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEec
Q 021218 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLR 148 (316)
Q Consensus 105 ~~~l~G~kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~-~Vivg~r 148 (316)
.+.|++ ++|.|||.|-+|..++++|... |. ++.+.++
T Consensus 113 q~~L~~-~~VlvvG~GglGs~va~~La~a------Gvg~i~lvD~ 150 (353)
T 3h5n_A 113 QDKLKN-AKVVILGCGGIGNHVSVILATS------GIGEIILIDN 150 (353)
T ss_dssp HHHHHT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEEEC
T ss_pred HHHHhC-CeEEEECCCHHHHHHHHHHHhC------CCCeEEEECC
Confidence 466788 9999999999999999999988 65 4555544
No 500
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=90.00 E-value=1.1 Score=43.55 Aligned_cols=85 Identities=18% Similarity=0.112 Sum_probs=48.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC-CcccHHHHHHCC----------------ceecCC------C
Q 021218 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAG----------------FTEENG------T 168 (316)
Q Consensus 112 kkIGIIG~G~mG~AlA~~Lr~~~~~~g~G~~Vivg~r~-~~~s~~~A~~~G----------------~~~~~~------t 168 (316)
.+|||+|+|.+|..+++.|... .+.+++++...+. +.+......++. +.. ++ .
T Consensus 3 ikVgInGfGrIGr~vlR~l~~~---~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v-~g~~i~v~~ 78 (380)
T 2d2i_A 3 IRVAINGFGRIGRNFLRCWFGR---QNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITV-NGKTMKIVC 78 (380)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC---SSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEE-TTEEEEEEC
T ss_pred cEEEEECcCHHHHHHHHHHhcC---CCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCeEEE-CCeEEEEEe
Confidence 5899999999999999998754 0124665443332 111111111110 100 00 0
Q ss_pred cCCHHhhh---ccCCEEEEcccCchHHHHHHHHHh
Q 021218 169 LGDIYETI---SGSDLVLLLISDAAQADNYEKIFS 200 (316)
Q Consensus 169 ~~~~~e~i---~~ADIViLavp~~~~~~vi~ei~~ 200 (316)
..+++++- .++|+|+.|++.....+.....++
T Consensus 79 ~~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~ 113 (380)
T 2d2i_A 79 DRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQ 113 (380)
T ss_dssp CSCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHH
T ss_pred cCChHHCCcccCCCCEEEECCCccccHHHHHHHHH
Confidence 12344432 279999999998887776665443
Done!