BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021219
(316 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225442853|ref|XP_002285369.1| PREDICTED: uncharacterized protein LOC100253140 [Vitis vinifera]
Length = 437
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/322 (72%), Positives = 274/322 (85%), Gaps = 7/322 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
MYQLLD+GFIGLIFSCFSEDA KVGRIQVIAFQS+DGKQ+++S+PI+L PV++S++ID+E
Sbjct: 115 MYQLLDSGFIGLIFSCFSEDAQKVGRIQVIAFQSTDGKQSNMSRPISLSPVHRSSIIDVE 174
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFANVDANHPERAR 120
SS SSSE+ A+SG E+ EQDTGDS+ +A KGGGR+S+LGGFFAN DAN+ R +
Sbjct: 175 SSFSSSENAPAKSGPARVESSEQDTGDSRTMALVNKGGGRSSDLGGFFANADANYLGRDK 234
Query: 121 TGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLKL 180
GGNY T + NA+ D+DPMDMSESMQEAMHRSNLDMSGAEYVRKE+PL V PT SLLKL
Sbjct: 235 MGGNYHTNNSENAVVDVDPMDMSESMQEAMHRSNLDMSGAEYVRKEVPLLVFPTLSLLKL 294
Query: 181 DSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCLS 240
DSPLTSFTDLQRVLYEEERAAYNQAI+QNM DGKVHPL +IHHTSTYQASMCKL+EYCLS
Sbjct: 295 DSPLTSFTDLQRVLYEEERAAYNQAIVQNMRDGKVHPLAFIHHTSTYQASMCKLMEYCLS 354
Query: 241 PAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSSLSSPHHSPSHGLRGSAYF---- 296
PAI+ALQDRLKENEIRLA+LTDEA++LE+EAFKGS+SS SP + SHG+RGSA F
Sbjct: 355 PAINALQDRLKENEIRLAILTDEARTLETEAFKGSESSSGSPRNFQSHGIRGSASFGHRD 414
Query: 297 ---HTSSDVRTAPGSGSRSRRG 315
S ++R+ G GSRSRRG
Sbjct: 415 LYPAESINLRSVAGPGSRSRRG 436
>gi|297743401|emb|CBI36268.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/322 (72%), Positives = 274/322 (85%), Gaps = 7/322 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
MYQLLD+GFIGLIFSCFSEDA KVGRIQVIAFQS+DGKQ+++S+PI+L PV++S++ID+E
Sbjct: 35 MYQLLDSGFIGLIFSCFSEDAQKVGRIQVIAFQSTDGKQSNMSRPISLSPVHRSSIIDVE 94
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFANVDANHPERAR 120
SS SSSE+ A+SG E+ EQDTGDS+ +A KGGGR+S+LGGFFAN DAN+ R +
Sbjct: 95 SSFSSSENAPAKSGPARVESSEQDTGDSRTMALVNKGGGRSSDLGGFFANADANYLGRDK 154
Query: 121 TGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLKL 180
GGNY T + NA+ D+DPMDMSESMQEAMHRSNLDMSGAEYVRKE+PL V PT SLLKL
Sbjct: 155 MGGNYHTNNSENAVVDVDPMDMSESMQEAMHRSNLDMSGAEYVRKEVPLLVFPTLSLLKL 214
Query: 181 DSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCLS 240
DSPLTSFTDLQRVLYEEERAAYNQAI+QNM DGKVHPL +IHHTSTYQASMCKL+EYCLS
Sbjct: 215 DSPLTSFTDLQRVLYEEERAAYNQAIVQNMRDGKVHPLAFIHHTSTYQASMCKLMEYCLS 274
Query: 241 PAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSSLSSPHHSPSHGLRGSAYF---- 296
PAI+ALQDRLKENEIRLA+LTDEA++LE+EAFKGS+SS SP + SHG+RGSA F
Sbjct: 275 PAINALQDRLKENEIRLAILTDEARTLETEAFKGSESSSGSPRNFQSHGIRGSASFGHRD 334
Query: 297 ---HTSSDVRTAPGSGSRSRRG 315
S ++R+ G GSRSRRG
Sbjct: 335 LYPAESINLRSVAGPGSRSRRG 356
>gi|449532194|ref|XP_004173067.1| PREDICTED: LOW QUALITY PROTEIN: lys-63-specific deubiquitinase
BRCC36-like, partial [Cucumis sativus]
Length = 359
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/323 (68%), Positives = 264/323 (81%), Gaps = 10/323 (3%)
Query: 2 YQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLES 61
YQLLD+GFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNH+S+PI+L PV +++VID+ES
Sbjct: 39 YQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVES 98
Query: 62 SLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFANVDANHPERART 121
SLSSS+++S G L ENPEQDTGDS ++AG+ KG GR+SELG FFAN D N+ + +
Sbjct: 99 SLSSSDNVSGNVGYGLGENPEQDTGDS-MIAGALKGTGRSSELGXFFANADTNYQGKEKI 157
Query: 122 GGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLKLD 181
GG+Y + ++ I DIDPMD+SESMQEAMHRSN++MS AE+ RKEIPLHV+PT+SL+KLD
Sbjct: 158 GGSYLINNTNSGITDIDPMDLSESMQEAMHRSNIEMSAAEFSRKEIPLHVMPTASLIKLD 217
Query: 182 SPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCLSP 241
SPLTSFTDLQ VL+EEER+AYNQAI NM DGKVHPLT+IHHTSTYQASMCKLIEYCLSP
Sbjct: 218 SPLTSFTDLQHVLFEEERSAYNQAISNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSP 277
Query: 242 AISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSSLSSPHHSPSHGLRGSA------- 294
AISALQDR+KENEIRLA+L +EA++LE EA K ++S SPH +HG R SA
Sbjct: 278 AISALQDRVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQV-THGSRASASPTHRDL 336
Query: 295 YFHTSS-DVRTAPGSGSRSRRGL 316
Y T+S R+ S RSR+GL
Sbjct: 337 YPSTASVGARSGGSSMYRSRKGL 359
>gi|449469008|ref|XP_004152213.1| PREDICTED: uncharacterized protein LOC101217628 [Cucumis sativus]
Length = 436
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/323 (68%), Positives = 263/323 (81%), Gaps = 10/323 (3%)
Query: 2 YQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLES 61
YQLLD+GFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNH+S+PI+L PV +++VID+ES
Sbjct: 116 YQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVES 175
Query: 62 SLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFANVDANHPERART 121
SLSSS+++S G ENPEQDTGDS ++AG+ KG GR+SELG FFAN D N+ + +
Sbjct: 176 SLSSSDNVSGNVGYGPGENPEQDTGDS-MIAGALKGTGRSSELGYFFANADTNYQGKEKI 234
Query: 122 GGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLKLD 181
GG+Y + ++ I DIDPMD+SESMQEAMHRSN++MS AE+ RKEIPLHV+PT+SL+KLD
Sbjct: 235 GGSYLINNTNSGITDIDPMDLSESMQEAMHRSNIEMSAAEFSRKEIPLHVMPTASLIKLD 294
Query: 182 SPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCLSP 241
SPLTSFTDLQ VL+EEER+AYNQAI NM DGKVHPLT+IHHTSTYQASMCKLIEYCLSP
Sbjct: 295 SPLTSFTDLQHVLFEEERSAYNQAISNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSP 354
Query: 242 AISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSSLSSPHHSPSHGLRGSA------- 294
AISALQDR+KENEIRLA+L +EA++LE EA K ++S SPH +HG R SA
Sbjct: 355 AISALQDRVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQV-THGSRASASPTHRDL 413
Query: 295 YFHTSS-DVRTAPGSGSRSRRGL 316
Y T+S R+ S RSR+GL
Sbjct: 414 YPSTASVGARSGGSSMYRSRKGL 436
>gi|358248516|ref|NP_001240150.1| uncharacterized protein LOC100784991 [Glycine max]
gi|255635958|gb|ACU18325.1| unknown [Glycine max]
Length = 436
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/323 (68%), Positives = 259/323 (80%), Gaps = 10/323 (3%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
MYQLLD+GFIGLIFSC+SED NKVGRIQVIAFQSSDGKQNH S+PI L PVN+S VID++
Sbjct: 115 MYQLLDSGFIGLIFSCYSEDVNKVGRIQVIAFQSSDGKQNHRSRPIPLSPVNRSPVIDID 174
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFANVDANHPERAR 120
SS SSSE++S + G AEN EQDTGDS+ V S K GGR S+LG FFAN DAN+ R +
Sbjct: 175 SSPSSSENVSTKPGYFEAENAEQDTGDSRSVVVS-KDGGR-SDLGNFFANADANYLGRDK 232
Query: 121 TGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLKL 180
+GGNY + I D+DPMDMSESMQEAMHRSNLDMSGAE+VRKEIPL+VLP SL+ L
Sbjct: 233 SGGNYHPNNSDTNIVDVDPMDMSESMQEAMHRSNLDMSGAEFVRKEIPLYVLPALSLINL 292
Query: 181 DSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCLS 240
DSPL+S+TDLQ VL+EEE+ AYNQAI+QNM DGKVHPLT+IHHTSTYQAS+CKLIEYCLS
Sbjct: 293 DSPLSSYTDLQHVLFEEEQNAYNQAILQNMRDGKVHPLTFIHHTSTYQASLCKLIEYCLS 352
Query: 241 PAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSSLSSPHH--SPSH------GLRG 292
PAI+ALQDRL+ENEIRLA+L++EAKSLE+EA++GS++S+ SP SP H GLR
Sbjct: 353 PAINALQDRLRENEIRLAVLSEEAKSLEAEAYRGSEASVGSPRRVASPVHRGGSSPGLRN 412
Query: 293 SAYFHTSSDVRTAPGSGSRSRRG 315
S R GSRSR+G
Sbjct: 413 LHDSPESLGSRNVASPGSRSRKG 435
>gi|356550598|ref|XP_003543672.1| PREDICTED: uncharacterized protein LOC100781761 [Glycine max]
Length = 436
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/323 (67%), Positives = 256/323 (79%), Gaps = 10/323 (3%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
MYQLLD+GFIGLIFSC+SED NKVGRIQVIAFQSSDGK NH+S+P+ L PVN+S VID++
Sbjct: 115 MYQLLDSGFIGLIFSCYSEDVNKVGRIQVIAFQSSDGKHNHMSRPVPLSPVNRSPVIDID 174
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFANVDANHPERAR 120
SS SSSE++S R G AEN EQDTGDS+ V S K GGR S+LG FFAN DAN+ R +
Sbjct: 175 SSPSSSENVSTRPGYFKAENAEQDTGDSRSVVVS-KDGGR-SDLGNFFANADANYLGRDK 232
Query: 121 TGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLKL 180
+GGNY + I D+D MDMSESMQEAMHRSNLDMSGAE+VRKEIPL+VLP SL+ +
Sbjct: 233 SGGNYHPNNSDTNIVDVDAMDMSESMQEAMHRSNLDMSGAEFVRKEIPLYVLPALSLINI 292
Query: 181 DSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCLS 240
DSPL+S+TDLQ VL+EEER AYNQAI+QN DGKVHPLT+IHHTSTYQAS+CKLIEYCLS
Sbjct: 293 DSPLSSYTDLQHVLFEEERNAYNQAILQNKRDGKVHPLTFIHHTSTYQASLCKLIEYCLS 352
Query: 241 PAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSSLSSPHH--SPSH------GLRG 292
PAI+ALQDRL+ENEIRLA+L +EAKSLE+EA++GS++S+ +P SP H GLR
Sbjct: 353 PAINALQDRLRENEIRLAVLREEAKSLEAEAYRGSEASVGTPRRVASPVHRGGSSPGLRN 412
Query: 293 SAYFHTSSDVRTAPGSGSRSRRG 315
S R GSRSR+G
Sbjct: 413 LHDSPESLGSRNVASPGSRSRKG 435
>gi|224058695|ref|XP_002299607.1| predicted protein [Populus trichocarpa]
gi|222846865|gb|EEE84412.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/326 (67%), Positives = 248/326 (76%), Gaps = 23/326 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
MYQLLD GFIGLIFSCF+ED NKVGRIQVIAFQSSDGKQN++ +P++ LPVNKS++I+L+
Sbjct: 115 MYQLLDPGFIGLIFSCFNEDVNKVGRIQVIAFQSSDGKQNNMLRPVSALPVNKSSIIELD 174
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFANVDANHPERAR 120
SS S SL E PE DT DS+ AGS KGG R+ LG FFAN DAN+ R R
Sbjct: 175 SSSSDIASL---------EGPELDTADSR-AAGSSKGGARSLGLGDFFANADANYVGRER 224
Query: 121 TGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLKL 180
GGNY + + + I DIDPMDMSESMQEAMHRSNLDMSGAEY R+EIPLHVLPT SLLKL
Sbjct: 225 IGGNYYSSNSGDKITDIDPMDMSESMQEAMHRSNLDMSGAEYSRREIPLHVLPTCSLLKL 284
Query: 181 DSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCLS 240
DSPL SF DLQRVLYEEER AYNQAI+QNM +GKVHPLT+IHHT+TYQASMCKLIEYCLS
Sbjct: 285 DSPLMSFGDLQRVLYEEERGAYNQAILQNMRNGKVHPLTFIHHTATYQASMCKLIEYCLS 344
Query: 241 PAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSSL-----SSPHHSPSHGLRGSAY 295
PAI+ALQ RL+EN+IRLA L DEAK LE E KGS+ + SP PS GLRGSA
Sbjct: 345 PAINALQGRLRENDIRLATLADEAKMLEMETAKGSELQISPSSSRSPRQVPSPGLRGSAL 404
Query: 296 -----FHTSSD---VRTAPGSGSRSR 313
FH SS+ RT GSRSR
Sbjct: 405 SGQRDFHGSSESLSSRTVASPGSRSR 430
>gi|357455111|ref|XP_003597836.1| Lys-63-specific deubiquitinase BRCC36 [Medicago truncatula]
gi|355486884|gb|AES68087.1| Lys-63-specific deubiquitinase BRCC36 [Medicago truncatula]
Length = 443
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/332 (65%), Positives = 257/332 (77%), Gaps = 19/332 (5%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
MYQLLD+GFIGLIFSC++EDANK+G+IQVIAFQSSDGKQN +S+PI L PVNKS++I ++
Sbjct: 114 MYQLLDSGFIGLIFSCYNEDANKIGKIQVIAFQSSDGKQNSMSRPIPLSPVNKSSIIHID 173
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFANVDANHPERAR 120
SS SSSE+L+ RSG ++PEQDTGDS+ AG+ KGGGR+SELG FFAN DAN+ +
Sbjct: 174 SSPSSSENLTTRSGYFKGDSPEQDTGDSR-SAGASKGGGRSSELGNFFANADANYLGSVK 232
Query: 121 TGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLKL 180
G NY + S+ I DPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLP+ S + L
Sbjct: 233 DGENYHLNN-SDIIAVDDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPSLSFINL 291
Query: 181 DSPLTSFTDLQRVLYEEERAAYNQAIMQNMS-DGKVHPLTYIHHTSTYQASMCKLIEYCL 239
DSPL+S+TDLQ VL+EEER AYNQAI+QN DGKVHPLT+IHHTSTYQAS+CKLIEYCL
Sbjct: 292 DSPLSSYTDLQHVLFEEERTAYNQAILQNTRWDGKVHPLTFIHHTSTYQASLCKLIEYCL 351
Query: 240 SPAISALQDRLKENEIRLAMLTDEAKSLESEA--FKGSDSSLSSPHHSPSHGLRGSAYFH 297
SPAI+ALQDRL+ENEIRLA+L++EAKSLE+EA +GS++SL SP S S
Sbjct: 352 SPAINALQDRLRENEIRLAVLSEEAKSLEAEASTSRGSEASLGSPRQVASPRQVASPIHR 411
Query: 298 TSSDVR--------------TAPGSGSRSRRG 315
SS R + GSRSR+G
Sbjct: 412 GSSSPRQRNSQSSSESLGSKSVASPGSRSRKG 443
>gi|255553089|ref|XP_002517587.1| C6.1a, putative [Ricinus communis]
gi|223543219|gb|EEF44751.1| C6.1a, putative [Ricinus communis]
Length = 413
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/300 (69%), Positives = 235/300 (78%), Gaps = 17/300 (5%)
Query: 24 VGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLESSLSSSESLSARSGNVLAENPEQ 83
VGRIQVIAFQSSDGKQN+ +PI++ PVN+ ID+ESSLSSSE S +SG+ E+ E
Sbjct: 122 VGRIQVIAFQSSDGKQNNTIRPISVSPVNRG-YIDVESSLSSSEYTSVKSGSGRIESAEL 180
Query: 84 DTGDSKIVAGSWKGGGRTSELGGFFANVDANHPERARTGGNYQTGDLSNAIGDIDPMDMS 143
DTGDS+ AGS LG FFAN DAN+ R R GGNY+TG+ A DIDPMDMS
Sbjct: 181 DTGDSRTAAGS--------NLGDFFANADANYVGRERIGGNYKTGNSDGAFFDIDPMDMS 232
Query: 144 ESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYN 203
ESMQEAMHRSNLDMSGAEY+RKEIPLHVLPT +LLKLDSPLTSFTDLQRVLYEEER AY
Sbjct: 233 ESMQEAMHRSNLDMSGAEYIRKEIPLHVLPTWALLKLDSPLTSFTDLQRVLYEEERGAYI 292
Query: 204 QAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDE 263
QA++QNM DGK+HPLT+IHHTSTYQASMCKLIEYCLSPAI+ LQDRL+ENEIRLAMLTDE
Sbjct: 293 QAMLQNMRDGKIHPLTFIHHTSTYQASMCKLIEYCLSPAINTLQDRLRENEIRLAMLTDE 352
Query: 264 AKSLESEAFKGSDSSLSSPHHSPSHGLRGSAY-----FHTSSD---VRTAPGSGSRSRRG 315
AK LESE F+GS+S+ SPH SHGLRGSA H SS+ VR GSR+R G
Sbjct: 353 AKVLESETFRGSESASRSPHLVSSHGLRGSASSGARDMHNSSESLSVRAVASPGSRTRSG 412
>gi|147864732|emb|CAN81936.1| hypothetical protein VITISV_005282 [Vitis vinifera]
Length = 406
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/356 (57%), Positives = 243/356 (68%), Gaps = 70/356 (19%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
MYQLLD+GFIGLIFSCFSEDA KVGRIQVIAFQS+DGKQ+++S+PI+L PV++S++ID+E
Sbjct: 29 MYQLLDSGFIGLIFSCFSEDAQKVGRIQVIAFQSTDGKQSNMSRPISLSPVHRSSIIDVE 88
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFANVDANHPERAR 120
SS SSSE+ A+SG E+ EQDTGDS+ +A KGGGR+S+LGGFFAN DAN+ R +
Sbjct: 89 SSFSSSENAPAKSGPARVESSEQDTGDSRTMALVNKGGGRSSDLGGFFANADANYLGRDK 148
Query: 121 TGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMS---------------------- 158
GGNY T + NA+ DIDPMDMSESMQEAMHRSNLDM
Sbjct: 149 MGGNYHTNNSENAVVDIDPMDMSESMQEAMHRSNLDMRLLLYLLLLQTRYRCPFDPGDIK 208
Query: 159 ------GAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSD 212
GAEYVRKE+PL V PT SLLKLDSPLTSFTDLQRVLYEEERAAYNQAI+QN S
Sbjct: 209 PLFLKLGAEYVRKEVPLLVFPTLSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIVQNTS- 267
Query: 213 GKVHPLTYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIR--------LAMLTDEA 264
LSPAI+ALQDRLKENEIR LA+LTDEA
Sbjct: 268 --------------------------LSPAINALQDRLKENEIRTDLLVLKQLAILTDEA 301
Query: 265 KSLESEAFKGSDSSLSSPHHSPSHGLRGSA-------YFHTSSDVRTAPGSGSRSR 313
+SLE+EAFKGS+SS SP + SHG+RGSA Y S ++R+ G G ++
Sbjct: 302 RSLETEAFKGSESSSGSPRNFQSHGIRGSASLGHRDLYPAESINLRSVAGPGDNAK 357
>gi|145337792|ref|NP_178138.2| BRCA1/BRCA2-containing complex subunit 3 [Arabidopsis thaliana]
gi|20147355|gb|AAM10390.1| At1g80210/F18B13_28 [Arabidopsis thaliana]
gi|25090323|gb|AAN72276.1| At1g80210/F18B13_28 [Arabidopsis thaliana]
gi|332198249|gb|AEE36370.1| BRCA1/BRCA2-containing complex subunit 3 [Arabidopsis thaliana]
Length = 406
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 191/279 (68%), Positives = 225/279 (80%), Gaps = 7/279 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
MYQLLD+GFIGLIFSCFSEDANKVGRIQVIAFQSSDGK N I K ++L+ NK +VIDLE
Sbjct: 116 MYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPKSMSLVLANKDSVIDLE 175
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFAN-VDANHPERA 119
SS SSS+S+ RS + +NPE DT D+ +GS KGGGR S+ FF N +AN+ R
Sbjct: 176 SSFSSSDSIYQRSSSARGDNPELDTSDTATTSGS-KGGGRVSDFEAFFVNNTEANNTRRD 234
Query: 120 RTGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLK 179
T GNY S AI +ID MDMSESMQEAMHRSNL+ SG YVRKE+PLHVLPTSSLL+
Sbjct: 235 GTSGNYS----STAI-EIDSMDMSESMQEAMHRSNLETSGVGYVRKEVPLHVLPTSSLLQ 289
Query: 180 LDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCL 239
L+SPL SF LQRVLYEEERAAY+Q++ Q+ DG+VHPL +IH+TSTYQASMCKLIEYCL
Sbjct: 290 LNSPLASFKSLQRVLYEEERAAYHQSVQQSKRDGRVHPLAFIHNTSTYQASMCKLIEYCL 349
Query: 240 SPAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSS 278
SPAI+ALQDRLKEN+IRLAML DEA+ LE++ KG+++S
Sbjct: 350 SPAINALQDRLKENKIRLAMLMDEAEVLEAQKLKGAETS 388
>gi|297833458|ref|XP_002884611.1| hypothetical protein ARALYDRAFT_478001 [Arabidopsis lyrata subsp.
lyrata]
gi|297330451|gb|EFH60870.1| hypothetical protein ARALYDRAFT_478001 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 189/299 (63%), Positives = 226/299 (75%), Gaps = 21/299 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
MYQLLD+GFIGLIFSCFSEDANKVGRIQVIAFQSSDGK N I K ++L+ NK +VIDLE
Sbjct: 97 MYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPKSMSLVLANKDSVIDLE 156
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDS------KIVAG--------------SWKGGGR 100
SS SSS+S+ RS + +NPE DT + K++ + GGGR
Sbjct: 157 SSFSSSDSIYQRSSSARGDNPELDTTIAFYSSLMKVLTNYNFCIIQLIIQILKTIMGGGR 216
Query: 101 TSELGGFFA-NVDANHPERARTGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSG 159
S+ G FF N +AN R T GNY +G+LS+ +ID MDMSESMQEAM RSNL+ SG
Sbjct: 217 VSDFGAFFVNNTEANITGRDGTSGNYSSGNLSSTAIEIDSMDMSESMQEAMLRSNLETSG 276
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
YVRKE+PLHVLPTSSLL+L+SPL SF LQRVLYEEERAAY+Q++ Q+M DG+VHPL
Sbjct: 277 VGYVRKEVPLHVLPTSSLLQLNSPLASFKSLQRVLYEEERAAYHQSVQQSMRDGRVHPLA 336
Query: 220 YIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSS 278
+IH+TSTYQASMCKLIEYCLSPAI+ALQDRLKEN+IRLAML DEA+ LE++ KG ++S
Sbjct: 337 FIHNTSTYQASMCKLIEYCLSPAINALQDRLKENKIRLAMLMDEAEVLEAQKLKGPETS 395
>gi|297839917|ref|XP_002887840.1| hypothetical protein ARALYDRAFT_477234 [Arabidopsis lyrata subsp.
lyrata]
gi|297333681|gb|EFH64099.1| hypothetical protein ARALYDRAFT_477234 [Arabidopsis lyrata subsp.
lyrata]
Length = 370
Score = 346 bits (888), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 179/260 (68%), Positives = 209/260 (80%), Gaps = 8/260 (3%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
MYQLLD+GFIGLI SCFSEDANKVGRIQVIAFQSSDGK N I KP++L+ NK +VIDLE
Sbjct: 116 MYQLLDSGFIGLIVSCFSEDANKVGRIQVIAFQSSDGKPNSIPKPVSLVLANKDSVIDLE 175
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFAN-VDANHPERA 119
SS SSS+S+ RS + +NPE DT D+ +GS KGGGR + G FF N +AN R
Sbjct: 176 SSFSSSDSIYQRSSSARGDNPELDTSDTATTSGS-KGGGRVLDFGAFFVNNAEANSTGRD 234
Query: 120 RTGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLK 179
T GNY T AI +ID MDMSESMQEAM RSNL+ SG EYVRKE+PLHVLPTSSLL+
Sbjct: 235 GTSGNYST-----AI-EIDSMDMSESMQEAMLRSNLETSGVEYVRKEVPLHVLPTSSLLQ 288
Query: 180 LDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCL 239
L+SPL SF LQRVLY+EERAAY+Q++ Q+M DG+VHPL +IH+TSTYQASMCKLIEYCL
Sbjct: 289 LNSPLASFRSLQRVLYDEERAAYHQSVQQSMRDGRVHPLAFIHNTSTYQASMCKLIEYCL 348
Query: 240 SPAISALQDRLKENEIRLAM 259
SPAI+ALQDRLKEN+IR+ +
Sbjct: 349 SPAINALQDRLKENKIRVCV 368
>gi|186496625|ref|NP_001117626.1| BRCA1/BRCA2-containing complex subunit 3 [Arabidopsis thaliana]
gi|332198250|gb|AEE36371.1| BRCA1/BRCA2-containing complex subunit 3 [Arabidopsis thaliana]
Length = 371
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/260 (68%), Positives = 209/260 (80%), Gaps = 7/260 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
MYQLLD+GFIGLIFSCFSEDANKVGRIQVIAFQSSDGK N I K ++L+ NK +VIDLE
Sbjct: 116 MYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPKSMSLVLANKDSVIDLE 175
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFAN-VDANHPERA 119
SS SSS+S+ RS + +NPE DT D+ +GS KGGGR S+ FF N +AN+ R
Sbjct: 176 SSFSSSDSIYQRSSSARGDNPELDTSDTATTSGS-KGGGRVSDFEAFFVNNTEANNTRRD 234
Query: 120 RTGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLK 179
T GNY S AI +ID MDMSESMQEAMHRSNL+ SG YVRKE+PLHVLPTSSLL+
Sbjct: 235 GTSGNYS----STAI-EIDSMDMSESMQEAMHRSNLETSGVGYVRKEVPLHVLPTSSLLQ 289
Query: 180 LDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCL 239
L+SPL SF LQRVLYEEERAAY+Q++ Q+ DG+VHPL +IH+TSTYQASMCKLIEYCL
Sbjct: 290 LNSPLASFKSLQRVLYEEERAAYHQSVQQSKRDGRVHPLAFIHNTSTYQASMCKLIEYCL 349
Query: 240 SPAISALQDRLKENEIRLAM 259
SPAI+ALQDRLKEN+IR+ +
Sbjct: 350 SPAINALQDRLKENKIRVCV 369
>gi|145331992|ref|NP_001078118.1| BRCA1/BRCA2-containing complex subunit 3 [Arabidopsis thaliana]
gi|332640942|gb|AEE74463.1| BRCA1/BRCA2-containing complex subunit 3 [Arabidopsis thaliana]
Length = 405
Score = 344 bits (882), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 191/289 (66%), Positives = 226/289 (78%), Gaps = 13/289 (4%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
MYQLLD+GFIGLIFSCFSEDANKVGRIQVIAFQSSDGK N I K ++L+ NK +VID+E
Sbjct: 116 MYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPKSMSLVLANKDSVIDIE 175
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFAN-VDANHPERA 119
SS SSS+S+ RS + PE DT D+ +GS KGGGR S+ G FF N ++AN R
Sbjct: 176 SSSSSSDSIYQRSS---SSKPELDTIDTATTSGS-KGGGRVSDFGPFFTNNIEANITGRD 231
Query: 120 RTGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLK 179
T +++G+LS+ ID MDMSESMQEAM RSNLD SGA YVRKE+PLHVLPTSSLL
Sbjct: 232 ET---HKSGNLSSTTIGIDSMDMSESMQEAMLRSNLDTSGAGYVRKEVPLHVLPTSSLLP 288
Query: 180 LDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCL 239
++SPL SF LQRVLYEEERAAY Q++ QNM DG+VHPL +IH+TSTYQASMCKLIEYCL
Sbjct: 289 VNSPLASFKSLQRVLYEEERAAYYQSVQQNMRDGRVHPLAFIHNTSTYQASMCKLIEYCL 348
Query: 240 SPAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSSLSSPHHSPSH 288
SPAI+ALQDR KEN+IRLAML DEA+ LE++ KG+++S PSH
Sbjct: 349 SPAINALQDRQKENKIRLAMLMDEAEVLEAQKLKGAETS-----RRPSH 392
>gi|42563565|ref|NP_187338.3| BRCA1/BRCA2-containing complex subunit 3 [Arabidopsis thaliana]
gi|332640941|gb|AEE74462.1| BRCA1/BRCA2-containing complex subunit 3 [Arabidopsis thaliana]
Length = 324
Score = 343 bits (880), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 189/284 (66%), Positives = 224/284 (78%), Gaps = 8/284 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
MYQLLD+GFIGLIFSCFSEDANKVGRIQVIAFQSSDGK N I K ++L+ NK +VID+E
Sbjct: 35 MYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPKSMSLVLANKDSVIDIE 94
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFAN-VDANHPERA 119
SS SSS+S+ RS + PE DT D+ +GS KGGGR S+ G FF N ++AN R
Sbjct: 95 SSSSSSDSIYQRSS---SSKPELDTIDTATTSGS-KGGGRVSDFGPFFTNNIEANITGRD 150
Query: 120 RTGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLK 179
T +++G+LS+ ID MDMSESMQEAM RSNLD SGA YVRKE+PLHVLPTSSLL
Sbjct: 151 ET---HKSGNLSSTTIGIDSMDMSESMQEAMLRSNLDTSGAGYVRKEVPLHVLPTSSLLP 207
Query: 180 LDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCL 239
++SPL SF LQRVLYEEERAAY Q++ QNM DG+VHPL +IH+TSTYQASMCKLIEYCL
Sbjct: 208 VNSPLASFKSLQRVLYEEERAAYYQSVQQNMRDGRVHPLAFIHNTSTYQASMCKLIEYCL 267
Query: 240 SPAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSSLSSPH 283
SPAI+ALQDR KEN+IRLAML DEA+ LE++ KG+++S H
Sbjct: 268 SPAINALQDRQKENKIRLAMLMDEAEVLEAQKLKGAETSRRPSH 311
>gi|19715647|gb|AAL91643.1| AT3g06820/F3E22_4 [Arabidopsis thaliana]
gi|23506165|gb|AAN31094.1| At3g06820/F3E22_4 [Arabidopsis thaliana]
Length = 405
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 190/289 (65%), Positives = 226/289 (78%), Gaps = 13/289 (4%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
MYQLLD+GFIGLI+SCFSEDANKVGRIQVIAFQSSDGK N I K ++L+ NK +VID+E
Sbjct: 116 MYQLLDSGFIGLIYSCFSEDANKVGRIQVIAFQSSDGKPNSIPKSMSLVLANKDSVIDIE 175
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFAN-VDANHPERA 119
SS SSS+S+ RS + PE DT D+ +GS KGGGR S+ G FF N ++AN R
Sbjct: 176 SSSSSSDSIYQRSS---SSKPELDTIDTATTSGS-KGGGRVSDFGPFFTNNIEANITGRD 231
Query: 120 RTGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLK 179
T +++G+LS+ ID MDMSESMQEAM RSNLD SGA YVRKE+PLHVLPTSSLL
Sbjct: 232 ET---HKSGNLSSTTIGIDSMDMSESMQEAMLRSNLDTSGAGYVRKEVPLHVLPTSSLLP 288
Query: 180 LDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCL 239
++SPL SF LQRVLYEEERAAY Q++ QNM DG+VHPL +IH+TSTYQASMCKLIEYCL
Sbjct: 289 VNSPLASFKSLQRVLYEEERAAYYQSVQQNMRDGRVHPLAFIHNTSTYQASMCKLIEYCL 348
Query: 240 SPAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSSLSSPHHSPSH 288
SPAI+ALQDR KEN+IRLAML DEA+ LE++ KG+++S PSH
Sbjct: 349 SPAINALQDRQKENKIRLAMLMDEAEVLEAQKLKGAETS-----RRPSH 392
>gi|5902374|gb|AAD55476.1|AC009322_16 Hypothetical protein [Arabidopsis thaliana]
Length = 327
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/279 (60%), Positives = 200/279 (71%), Gaps = 34/279 (12%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
MYQLLD+GFIGLIFSCFSEDANKVGRIQVIAFQSSDGK N I K ++L+ NK +VIDLE
Sbjct: 64 MYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPKSMSLVLANKDSVIDLE 123
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFA-NVDANHPERA 119
SS SSS+S+ RS + +NPE DT D+ +GS KGGGR S+ FF N +AN+ R
Sbjct: 124 SSFSSSDSIYQRSSSARGDNPELDTSDTATTSGS-KGGGRVSDFEAFFVNNTEANNTRRD 182
Query: 120 RTGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLK 179
T GNY S AI +ID MDMSESMQEAMHRSNL+ SG YVRKE+PLHVLPTSSLL+
Sbjct: 183 GTSGNYS----STAI-EIDSMDMSESMQEAMHRSNLETSGVGYVRKEVPLHVLPTSSLLQ 237
Query: 180 LDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCL 239
L+SPL SF LQRVLYEEERAAY+Q++ Q+ S L
Sbjct: 238 LNSPLASFKSLQRVLYEEERAAYHQSVQQSKS---------------------------L 270
Query: 240 SPAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSS 278
SPAI+ALQDRLKEN+IRLAML DEA+ LE++ KG+++S
Sbjct: 271 SPAINALQDRLKENKIRLAMLMDEAEVLEAQKLKGAETS 309
>gi|52353421|gb|AAU43989.1| unknown protein [Oryza sativa Japonica Group]
Length = 430
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 164/318 (51%), Positives = 216/318 (67%), Gaps = 20/318 (6%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
M+QL++ GF+GLIFSCFSEDA KVG+IQVIAFQS G Q +++PVN VI+LE
Sbjct: 125 MFQLMEPGFVGLIFSCFSEDAQKVGKIQVIAFQSLGGNQQ------SVVPVNDP-VINLE 177
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFANVDANHPERAR 120
SS SS L S L E EQDTGDSK S K ++S++ F+ + DANH + +
Sbjct: 178 SSWSS---LDDTSHPALIEGIEQDTGDSKSSRNS-KVWAKSSDVD-FYPHFDANHSAKHQ 232
Query: 121 TGGN----YQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSS 176
+ N Y + D+D DM+ S+QEA+HRSN+D+SGAEYVRKE+PL+V PT
Sbjct: 233 SKENAIVAYDPNNAPETPVDLDESDMTPSIQEALHRSNMDISGAEYVRKEVPLYVFPTRH 292
Query: 177 LLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIE 236
LLKLD+ LTS+ D+Q V++EEE++AYNQA+ QN+ DGK+HPLT IHH STY +S+CKL+E
Sbjct: 293 LLKLDTTLTSYCDMQHVVFEEEKSAYNQAMHQNIRDGKIHPLTSIHHASTYNSSLCKLME 352
Query: 237 YCLSPAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSSLSSPHHSPSHGLRGSAYF 296
YCLSPAI+ LQDRLKENE+RL+ML +EAK LE+E + SP HG G++
Sbjct: 353 YCLSPAITVLQDRLKENELRLSMLMEEAKQLEAENQSMRN---DSPRRLMYHGTSGTSSL 409
Query: 297 HTSSDVRTAPGSGSRSRR 314
+ D + +P S S + R
Sbjct: 410 -MAQDKQMSPRSPSGTGR 426
>gi|115465193|ref|NP_001056196.1| Os05g0542600 [Oryza sativa Japonica Group]
gi|113579747|dbj|BAF18110.1| Os05g0542600 [Oryza sativa Japonica Group]
gi|215715282|dbj|BAG95033.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632419|gb|EEE64551.1| hypothetical protein OsJ_19403 [Oryza sativa Japonica Group]
Length = 420
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 164/318 (51%), Positives = 216/318 (67%), Gaps = 20/318 (6%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
M+QL++ GF+GLIFSCFSEDA KVG+IQVIAFQS G Q +++PVN VI+LE
Sbjct: 115 MFQLMEPGFVGLIFSCFSEDAQKVGKIQVIAFQSLGGNQQ------SVVPVNDP-VINLE 167
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFANVDANHPERAR 120
SS SS L S L E EQDTGDSK S K ++S++ F+ + DANH + +
Sbjct: 168 SSWSS---LDDTSHPALIEGIEQDTGDSKSSRNS-KVWAKSSDVD-FYPHFDANHSAKHQ 222
Query: 121 TGGN----YQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSS 176
+ N Y + D+D DM+ S+QEA+HRSN+D+SGAEYVRKE+PL+V PT
Sbjct: 223 SKENAIVAYDPNNAPETPVDLDESDMTPSIQEALHRSNMDISGAEYVRKEVPLYVFPTRH 282
Query: 177 LLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIE 236
LLKLD+ LTS+ D+Q V++EEE++AYNQA+ QN+ DGK+HPLT IHH STY +S+CKL+E
Sbjct: 283 LLKLDTTLTSYCDMQHVVFEEEKSAYNQAMHQNIRDGKIHPLTSIHHASTYNSSLCKLME 342
Query: 237 YCLSPAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSSLSSPHHSPSHGLRGSAYF 296
YCLSPAI+ LQDRLKENE+RL+ML +EAK LE+E + SP HG G++
Sbjct: 343 YCLSPAITVLQDRLKENELRLSMLMEEAKQLEAENQSMRN---DSPRRLMYHGTSGTSSL 399
Query: 297 HTSSDVRTAPGSGSRSRR 314
+ D + +P S S + R
Sbjct: 400 -MAQDKQMSPRSPSGTGR 416
>gi|55908887|gb|AAV67830.1| unknown protein [Oryza sativa Japonica Group]
Length = 416
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/318 (51%), Positives = 216/318 (67%), Gaps = 20/318 (6%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
M+QL++ GF+GLIFSCFSEDA KVG+IQVIAFQS G Q +++PVN VI+LE
Sbjct: 111 MFQLMEPGFVGLIFSCFSEDAQKVGKIQVIAFQSLGGNQQ------SVVPVN-DPVINLE 163
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFANVDANHPERAR 120
SS SS L S L E EQDTGDSK S K ++S++ F+ + DANH + +
Sbjct: 164 SSWSS---LDDTSHPALIEGIEQDTGDSKSSRNS-KVWAKSSDVD-FYPHFDANHSAKHQ 218
Query: 121 TGGN----YQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSS 176
+ N Y + D+D DM+ S+QEA+HRSN+D+SGAEYVRKE+PL+V PT
Sbjct: 219 SKENAIVAYDPNNAPETPVDLDESDMTPSIQEALHRSNMDISGAEYVRKEVPLYVFPTRH 278
Query: 177 LLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIE 236
LLKLD+ LTS+ D+Q V++EEE++AYNQA+ QN+ DGK+HPLT IHH STY +S+CKL+E
Sbjct: 279 LLKLDTTLTSYCDMQHVVFEEEKSAYNQAMHQNIRDGKIHPLTSIHHASTYNSSLCKLME 338
Query: 237 YCLSPAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSSLSSPHHSPSHGLRGSAYF 296
YCLSPAI+ LQDRLKENE+RL+ML +EAK LE+E + SP HG G++
Sbjct: 339 YCLSPAITVLQDRLKENELRLSMLMEEAKQLEAENQSMRN---DSPRRLMYHGTSGTSSL 395
Query: 297 HTSSDVRTAPGSGSRSRR 314
+ D + +P S S + R
Sbjct: 396 -MAQDKQMSPRSPSGTGR 412
>gi|357132731|ref|XP_003567982.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Brachypodium
distachyon]
Length = 428
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/275 (56%), Positives = 202/275 (73%), Gaps = 15/275 (5%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
M+QLL+ GF+GLIFSCFSEDA KVG+IQVIAFQS DG Q A++PV VIDLE
Sbjct: 115 MFQLLEPGFVGLIFSCFSEDAQKVGKIQVIAFQSLDGTQR------AIVPVITDPVIDLE 168
Query: 61 SSLSSSES-LSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFANVDANHPERA 119
SS SSS+ L+ + + E EQDTGDS+ + GS K GR+ + ++++D NH +
Sbjct: 169 SSWSSSDKSLTPKYAAI--EGIEQDTGDSRALKGS-KVWGRSLD-ADLYSHLDTNHSSKH 224
Query: 120 RTGGN----YQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTS 175
+ N Y+ +L D D DMS S+QEA+HRS +D+SGAEY R+E+PLHV PT
Sbjct: 225 QPRENAIVAYEPDNLPGVSADQDGSDMSPSIQEALHRSTMDISGAEYRRREVPLHVFPTR 284
Query: 176 SLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLI 235
LLKLD+ LTS+ D+Q VL++EE++AYNQA++QN+ DGK+HPLT IHHTSTY +S+CKL+
Sbjct: 285 HLLKLDTTLTSYCDMQHVLFQEEQSAYNQAMLQNICDGKMHPLTSIHHTSTYNSSLCKLM 344
Query: 236 EYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
EYCLSPAI+ LQDRLKE E++L+ML +EAK LE+E
Sbjct: 345 EYCLSPAITVLQDRLKEQELQLSMLVEEAKELEAE 379
>gi|218197197|gb|EEC79624.1| hypothetical protein OsI_20836 [Oryza sativa Indica Group]
Length = 432
Score = 287 bits (735), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 164/330 (49%), Positives = 216/330 (65%), Gaps = 32/330 (9%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
M+QL++ GF+GLIFSCFSEDA KVG+IQVIAFQS G Q +++PVN VI+LE
Sbjct: 115 MFQLMEPGFVGLIFSCFSEDAQKVGKIQVIAFQSLGGNQQ------SVVPVNDP-VINLE 167
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFANVDANHPERAR 120
SS SS L S L E EQDTGDSK S K ++S++ F+ + DANH + +
Sbjct: 168 SSWSS---LDDTSHPALIEGIEQDTGDSKSSRNS-KVWAKSSDVD-FYPHFDANHSAKHQ 222
Query: 121 TGGN----YQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSS 176
+ N Y + D+D DM+ S+QEA+HRSN+D+SGAEYVRKE+PL+V PT
Sbjct: 223 SKENAIVAYDPNNTPETPVDLDESDMTPSIQEALHRSNMDISGAEYVRKEVPLYVFPTRH 282
Query: 177 LLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIE 236
LLKLD+ LTS+ D+Q V++EEE++AYNQA+ QN+ DGK+HPLT IHH STY +S+CKL+E
Sbjct: 283 LLKLDTTLTSYCDMQHVVFEEEKSAYNQAMHQNIRDGKIHPLTSIHHASTYNSSLCKLME 342
Query: 237 YC------------LSPAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSSLSSPHH 284
YC LSPAI+ LQDRLKENE+RL+ML +EAK LE+E + SP
Sbjct: 343 YCPLQTYLAFCYSSLSPAITVLQDRLKENELRLSMLMEEAKQLEAENQSMRN---DSPRR 399
Query: 285 SPSHGLRGSAYFHTSSDVRTAPGSGSRSRR 314
HG G++ + D + +P S S + R
Sbjct: 400 LMYHGTSGTSSL-MAQDKQMSPRSPSGTGR 428
>gi|7549631|gb|AAF63816.1| unknown protein [Arabidopsis thaliana]
Length = 374
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 169/289 (58%), Positives = 201/289 (69%), Gaps = 40/289 (13%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
MYQLLD+GFIGLIFSCFSEDANKVGRIQVIAFQSSDGK N I K ++L+ NK +VID+E
Sbjct: 112 MYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPKSMSLVLANKDSVIDIE 171
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFAN-VDANHPERA 119
SS SSS+S+ RS + PE DT D+ +GS KGGGR S+ G FF N ++AN R
Sbjct: 172 SSSSSSDSIYQRSS---SSKPELDTIDTATTSGS-KGGGRVSDFGPFFTNNIEANITGRD 227
Query: 120 RTGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLK 179
T +++G+LS+ ID MDMSESMQEAM RSNLD SGA YVRKE+PLHVLPTSSLL
Sbjct: 228 ET---HKSGNLSSTTIGIDSMDMSESMQEAMLRSNLDTSGAGYVRKEVPLHVLPTSSLLP 284
Query: 180 LDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCL 239
++SPL SF LQRVLYEEERAAY Q++ QNMS L
Sbjct: 285 VNSPLASFKSLQRVLYEEERAAYYQSVQQNMS---------------------------L 317
Query: 240 SPAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSSLSSPHHSPSH 288
SPAI+ALQDR KEN+IRLAML DEA+ LE++ KG+++S PSH
Sbjct: 318 SPAINALQDRQKENKIRLAMLMDEAEVLEAQKLKGAETS-----RRPSH 361
>gi|116788310|gb|ABK24832.1| unknown [Picea sitchensis]
Length = 420
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/287 (49%), Positives = 193/287 (67%), Gaps = 10/287 (3%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISK-PIALLPVNKSTVIDL 59
+YQLLD GFIG+IFSCFSEDA KVGRIQVIAFQ+ DGK H+++ P+ + PVN +
Sbjct: 87 LYQLLDPGFIGVIFSCFSEDAQKVGRIQVIAFQALDGKHKHLTRVPVQVAPVNVVAGSEA 146
Query: 60 ESSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWK---GGGRTSELGGFFANVDANHP 116
E + ++ + +S E + D ++K+ G+ K G + L FF N ++
Sbjct: 147 ELTRTTLGNSMPKSTTGQPEIIDLDPVNTKVSVGTTKFQIGDKTQTALDKFFDNAESESS 206
Query: 117 ER-----ARTGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHV 171
R + Y G L N+I ++D MD++ MQEA+HRS LD+SGAEY RKE+PL V
Sbjct: 207 RRRDKMGPESASPYHNGSLRNSISNLDSMDLTSRMQEAVHRSTLDVSGAEYARKEVPLQV 266
Query: 172 LPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASM 231
+ + K + PL+SF DLQ +L+ EE+ AYNQA++Q+ +G+VHPL IHH+STYQASM
Sbjct: 267 VTGHPVAKFEFPLSSFVDLQHLLFTEEQIAYNQAMLQSARNGRVHPLAAIHHSSTYQASM 326
Query: 232 CKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESEAF-KGSDS 277
CKL+EYCLSP IS+L DRL+EN++RLAML +EA SLE E F KGS S
Sbjct: 327 CKLMEYCLSPVISSLWDRLEENKLRLAMLQEEAISLELELFNKGSHS 373
>gi|194705018|gb|ACF86593.1| unknown [Zea mays]
gi|413946308|gb|AFW78957.1| mov34/MPN/PAD-1 family protein [Zea mays]
Length = 423
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 161/332 (48%), Positives = 216/332 (65%), Gaps = 42/332 (12%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
M+QLLDTGF+GLIFSCFSEDA KVG+IQV AFQS G+Q+ + P+A+ PV +
Sbjct: 114 MFQLLDTGFVGLIFSCFSEDAQKVGKIQVTAFQSEGGQQHAL--PLAIAPV----IDLDS 167
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVA--GSWKGGGRTSELGGFFANVDANHPER 118
S SS +L++ S L E EQDTGDS+ +WK R+ + F+++ D NH
Sbjct: 168 SLSSSDNALTSHSA--LVEGMEQDTGDSRASKHNKAWK---RSLD---FYSHPDTNH--- 216
Query: 119 ARTGGNYQTGDLSNAI--------GDIDPMD--MSESMQEAMHRSNLDMSGAEYVRKEIP 168
NYQ + + A+ +DP D M++S+QEA+HRS +D+SGAEY KE+P
Sbjct: 217 ---STNYQPNENTLALYNPDNTQEAPVDPYDSDMTQSLQEALHRSTMDISGAEYRGKEVP 273
Query: 169 LHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQ 228
L VLPT LLKLD+ +TS+ D+QRVL+EEE++AYNQA+ QN+ DGK+HPLT IH TSTY
Sbjct: 274 LFVLPTRYLLKLDTTMTSYCDMQRVLFEEEQSAYNQAMQQNICDGKIHPLTSIHCTSTYN 333
Query: 229 ASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSSLSSPHHSPSH 288
+S+CKL+EYCLSPA+ LQDRLKENE+RL+ML +E K LE++ +G + SP +H
Sbjct: 334 SSLCKLMEYCLSPAVITLQDRLKENELRLSMLKEECKQLEADT-QGMRN--GSPRRLMNH 390
Query: 289 GLRGSA-------YFHTSSDVRTAPGSGSRSR 313
G GS + +S +P GSR R
Sbjct: 391 GAGGSGSPMAQSRHPFSSQGSPRSPSGGSRRR 422
>gi|194700388|gb|ACF84278.1| unknown [Zea mays]
gi|413946306|gb|AFW78955.1| hypothetical protein ZEAMMB73_817559 [Zea mays]
Length = 424
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 161/332 (48%), Positives = 216/332 (65%), Gaps = 42/332 (12%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
M+QLLDTGF+GLIFSCFSEDA KVG+IQV AFQS G+Q+ + P+A+ PV +
Sbjct: 115 MFQLLDTGFVGLIFSCFSEDAQKVGKIQVTAFQSEGGQQHAL--PLAIAPV----IDLDS 168
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVA--GSWKGGGRTSELGGFFANVDANHPER 118
S SS +L++ S L E EQDTGDS+ +WK R+ + F+++ D NH
Sbjct: 169 SLSSSDNALTSHSA--LVEGMEQDTGDSRASKHNKAWK---RSLD---FYSHPDTNH--- 217
Query: 119 ARTGGNYQTGDLSNAI--------GDIDPMD--MSESMQEAMHRSNLDMSGAEYVRKEIP 168
NYQ + + A+ +DP D M++S+QEA+HRS +D+SGAEY KE+P
Sbjct: 218 ---STNYQPNENTLALYNPDNTQEAPVDPYDSDMTQSLQEALHRSTMDISGAEYRGKEVP 274
Query: 169 LHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQ 228
L VLPT LLKLD+ +TS+ D+QRVL+EEE++AYNQA+ QN+ DGK+HPLT IH TSTY
Sbjct: 275 LFVLPTRYLLKLDTTMTSYCDMQRVLFEEEQSAYNQAMQQNICDGKIHPLTSIHCTSTYN 334
Query: 229 ASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSSLSSPHHSPSH 288
+S+CKL+EYCLSPA+ LQDRLKENE+RL+ML +E K LE++ +G + SP +H
Sbjct: 335 SSLCKLMEYCLSPAVITLQDRLKENELRLSMLKEECKQLEADT-QGMRN--GSPRRLMNH 391
Query: 289 GLRGSA-------YFHTSSDVRTAPGSGSRSR 313
G GS + +S +P GSR R
Sbjct: 392 GAGGSGSPMAQSRHPFSSQGSPRSPSGGSRRR 423
>gi|226502250|ref|NP_001149966.1| mov34/MPN/PAD-1 family protein [Zea mays]
gi|195635783|gb|ACG37360.1| mov34/MPN/PAD-1 family protein [Zea mays]
Length = 423
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 161/332 (48%), Positives = 216/332 (65%), Gaps = 42/332 (12%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
M+QLLDTGF+GLIFSCFSEDA KVG+IQV AFQS G+Q+ + P+A+ PV +
Sbjct: 114 MFQLLDTGFVGLIFSCFSEDAQKVGKIQVTAFQSEGGQQHAL--PLAIAPV----IDLDS 167
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVA--GSWKGGGRTSELGGFFANVDANHPER 118
S SS +L++ S L E EQDTGDS+ +WK R+ + F+++ D NH
Sbjct: 168 SLSSSDNALTSHSA--LVEGMEQDTGDSRASKHNKAWK---RSLD---FYSHPDTNH--- 216
Query: 119 ARTGGNYQTGDLSNAI--------GDIDPMD--MSESMQEAMHRSNLDMSGAEYVRKEIP 168
NYQ + + A+ +DP D M++S+QEA+HRS +D+SGAEY KE+P
Sbjct: 217 ---STNYQPNENTLALYNPDNTQEAPVDPYDSDMTQSLQEALHRSTMDISGAEYRGKEVP 273
Query: 169 LHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQ 228
L VLPT LLKLD+ +TS+ D+QRVL+EEE++AYNQA+ QN+ DGK+HPLT IH TSTY
Sbjct: 274 LFVLPTRYLLKLDTTMTSYCDMQRVLFEEEQSAYNQAMQQNICDGKIHPLTSIHCTSTYN 333
Query: 229 ASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSSLSSPHHSPSH 288
+S+CKL+EYCLSPA+ LQDRLKENE+RL+ML +E K LE++ +G + SP +H
Sbjct: 334 SSLCKLMEYCLSPAVITLQDRLKENELRLSMLKEECKQLEADT-QGMRN--GSPRRLMNH 390
Query: 289 GLRGSA-------YFHTSSDVRTAPGSGSRSR 313
G GS + +S +P GSR R
Sbjct: 391 GAGGSGSPMAQSRHPFSSQGSPRSPSGGSRRR 422
>gi|242088665|ref|XP_002440165.1| hypothetical protein SORBIDRAFT_09g027130 [Sorghum bicolor]
gi|241945450|gb|EES18595.1| hypothetical protein SORBIDRAFT_09g027130 [Sorghum bicolor]
Length = 423
Score = 273 bits (698), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 150/298 (50%), Positives = 204/298 (68%), Gaps = 19/298 (6%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
M+QLLDTGF+GLIFSCFSEDA KVG+IQV AFQS G+Q+ + P+A+ PV +
Sbjct: 114 MFQLLDTGFVGLIFSCFSEDAQKVGKIQVTAFQSEGGQQHAL--PLAIAPV----IDLDS 167
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFANVDANHPERAR 120
S SS + ++ S +V E EQDTGDS+ + K R+ + F+++ D +H +
Sbjct: 168 SCSSSDNAFASHSASV--EGMEQDTGDSRASKNN-KAWRRSMD---FYSHPDTSHSTSYQ 221
Query: 121 TGGN----YQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSS 176
N Y + A D DM+ S+QEA+HRS +D+SGAEY KE+PL VLPT
Sbjct: 222 PRENALILYNPDNTQEASVDPYDSDMTPSLQEALHRSTMDISGAEYRGKEVPLFVLPTRY 281
Query: 177 LLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIE 236
LLKLD+ +TS+ D+QRVL+EEE++AYNQA+ QN+ DGK+HPLT IHHTSTY +S+CKL+E
Sbjct: 282 LLKLDTTMTSYCDMQRVLFEEEQSAYNQAMQQNICDGKIHPLTSIHHTSTYNSSLCKLME 341
Query: 237 YCLSPAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSDSSLSSPHHSPSHGLRGSA 294
YCLSPA++ LQDRLKENE+RL+ML +EAK LE++ + +SP +HG G++
Sbjct: 342 YCLSPAVTTLQDRLKENELRLSMLQEEAKQLEADTQSMRN---NSPRRLMNHGAGGNS 396
>gi|388510486|gb|AFK43309.1| unknown [Medicago truncatula]
Length = 192
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/192 (66%), Positives = 147/192 (76%), Gaps = 16/192 (8%)
Query: 140 MDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEER 199
MDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLP+ S + LDSPL+S+TDLQ VL+EEER
Sbjct: 1 MDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPSLSFINLDSPLSSYTDLQHVLFEEER 60
Query: 200 AAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAM 259
AYNQAI+QN DGKVHPLT+IHHTSTYQAS+CKLIEYCLSPAI+ALQDRL+ENEIRLA+
Sbjct: 61 TAYNQAILQNTRDGKVHPLTFIHHTSTYQASLCKLIEYCLSPAINALQDRLRENEIRLAV 120
Query: 260 LTDEAKSLESEA--FKGSDSSLSSPHHSPSHGLRGSAYFHTSSDVR-------------- 303
L++EAKSLE+EA +GS++SL SP S S SS R
Sbjct: 121 LSEEAKSLEAEASTSRGSEASLGSPRQVASPRQVASPIHRGSSSPRQGNSQSSSESLGSK 180
Query: 304 TAPGSGSRSRRG 315
+ GSRSR+G
Sbjct: 181 SVASPGSRSRKG 192
>gi|168019486|ref|XP_001762275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686353|gb|EDQ72742.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 417
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/255 (44%), Positives = 155/255 (60%), Gaps = 26/255 (10%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
MYQ+LD GF+GLIFSCFSED++KVGRIQ IAFQS DG+ S+P+ PV ++
Sbjct: 115 MYQMLDPGFVGLIFSCFSEDSSKVGRIQAIAFQSRDGRS---SRPV---PVWGTS----- 163
Query: 61 SSLSSSESLSARSGNVL-AENPEQDTGDSKIVAGSWKGGGRTSELGGFFANVDANHPERA 119
S+ + + G VL +PE D + + G ++ L FA D N P
Sbjct: 164 SNANPPAATVPDFGGVLEGADPEMDLDMQLATKMNMEQHGSSAPLENLFAISD-NKP--- 219
Query: 120 RTGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLK 179
+S A D D + +MQEA+H S LD+S A+Y+RKE+PL +LP S ++
Sbjct: 220 ---------SVSGASSDYVREDDAFTMQEALHLSTLDISDAQYIRKEVPLEILPGHSRME 270
Query: 180 LDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSD-GKVHPLTYIHHTSTYQASMCKLIEYC 238
+ PL+S LQ +LY EE AAYNQA+ Q+ +D G++HPL IHH+STYQAS+ KL+EYC
Sbjct: 271 AEHPLSSLVALQEILYAEEHAAYNQAMKQSTNDRGQLHPLAAIHHSSTYQASLTKLLEYC 330
Query: 239 LSPAISALQDRLKEN 253
L P +L DRL++N
Sbjct: 331 LCPVSMSLWDRLQQN 345
>gi|413948304|gb|AFW80953.1| hypothetical protein ZEAMMB73_019879 [Zea mays]
Length = 177
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 126/179 (70%), Gaps = 11/179 (6%)
Query: 142 MSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAA 201
M+ S+ EA+H S +D+SGAEY KE+PL V+PT LLKLD+ + S+ D+QRVL+EEE++A
Sbjct: 1 MTPSLLEALHWSTMDISGAEYRGKEVPLLVVPTRYLLKLDTTMISYCDMQRVLFEEEKSA 60
Query: 202 YNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLT 261
YNQA+ QN+ DGK+HPLT IHHTSTY S+CKL+EYCLSPA++ LQDRLKENE+RL+ML
Sbjct: 61 YNQAMQQNICDGKIHPLTSIHHTSTYN-SLCKLMEYCLSPAVTTLQDRLKENELRLSMLQ 119
Query: 262 DEAKSLESEAFKGSDSSLSSPHHSPSHGLRG-------SAYFHTSSDVRTAPGSGSRSR 313
+EAK LE++ + SP +HG G S + ++ +P GSR R
Sbjct: 120 EEAKQLEADTQNMRN---GSPRRLMNHGAGGKSSPTAQSRHPFSNQGSPRSPSGGSRRR 175
>gi|302798573|ref|XP_002981046.1| hypothetical protein SELMODRAFT_420655 [Selaginella moellendorffii]
gi|300151100|gb|EFJ17747.1| hypothetical protein SELMODRAFT_420655 [Selaginella moellendorffii]
Length = 338
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 143/266 (53%), Gaps = 44/266 (16%)
Query: 2 YQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLES 61
+Q+LD GFIG+IFSCF +DAN VGR+Q IAFQS++G+Q +S
Sbjct: 54 FQMLDPGFIGVIFSCFDDDANMVGRVQSIAFQSTNGRQRKVS-----------------G 96
Query: 62 SLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSELGGFFANVDANHPERART 121
S SS + + G N E+ + D +S L VD N+ R
Sbjct: 97 SFQSSSAQHSSFG--FGSNGERSSVDEA-----------SSSLSTV---VDINYTRR--- 137
Query: 122 GGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLKLD 181
+S++ + +S ++EAMH S+LDMS ++ RKEIP+ V+P S+ +
Sbjct: 138 --------ISDSSSNEIEQRLSPGIEEAMHLSSLDMSSGDFSRKEIPMQVVPVSTFNLAN 189
Query: 182 SPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCLSP 241
P LQ+ ++ EE+AA+ +A+ Q+ ++HPL HH T+QAS+ KL+E CL P
Sbjct: 190 PPPDPLLSLQQTVFNEEKAAFEKAMHQSKQGQRIHPLAASHHCVTHQASLLKLMELCLVP 249
Query: 242 AISALQDRLKENEIRLAMLTDEAKSL 267
A++ L D L++N+ ++A+L E +L
Sbjct: 250 AMTTLWDNLQQNKAQIALLHQEEAAL 275
>gi|302801530|ref|XP_002982521.1| hypothetical protein SELMODRAFT_116616 [Selaginella moellendorffii]
gi|300149620|gb|EFJ16274.1| hypothetical protein SELMODRAFT_116616 [Selaginella moellendorffii]
Length = 379
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 144/268 (53%), Gaps = 42/268 (15%)
Query: 2 YQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLES 61
+Q+LD GFIG+IFSCF +DAN VGR+Q IAFQS++G+Q +S
Sbjct: 137 FQMLDPGFIGVIFSCFDDDANMVGRVQSIAFQSTNGRQRKVS-----------------G 179
Query: 62 SLSSSESLSARSGNVLAENPEQDTGDS-----KIVAGSWKGGGRTSELGGFF---ANVDA 113
S SS + + G N E+ + D ++ KG S+L FF VD
Sbjct: 180 SFQSSSAQHSSFG--FGSNGERSSVDEASSSLSVLEHLLKG----SQLFSFFFLQTVVDI 233
Query: 114 NHPERARTGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLP 173
N+ R +S++ + +S ++EAMH S+LD S ++ RKEIP+ V+P
Sbjct: 234 NYTRR-----------ISDSSSNEIEQRLSPGIEEAMHLSSLDTSSGDFSRKEIPMQVVP 282
Query: 174 TSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCK 233
S+ + P LQ+ ++ EE+AA+ +A+ Q+ ++HPL HH T+QA++ K
Sbjct: 283 VSTFNLANPPPDPLLSLQQTVFNEEKAAFEKAMHQSKQGQRIHPLAASHHCVTHQAALLK 342
Query: 234 LIEYCLSPAISALQDRLKENEIRLAMLT 261
L+E CL PA++ L D L++N+ ++ L+
Sbjct: 343 LMELCLVPAMTTLWDNLQQNKAQVKNLS 370
>gi|217071974|gb|ACJ84347.1| unknown [Medicago truncatula]
Length = 221
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 73/83 (87%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
MYQLLD+GFIGLIFSC++EDANK+G+IQVIAFQSSDGKQN +S+PI L PVNKS++I ++
Sbjct: 115 MYQLLDSGFIGLIFSCYNEDANKIGKIQVIAFQSSDGKQNSMSRPIPLSPVNKSSIIHID 174
Query: 61 SSLSSSESLSARSGNVLAENPEQ 83
SS SSSE+L+ RSG ++PEQ
Sbjct: 175 SSPSSSENLTTRSGYFKGDSPEQ 197
>gi|388516823|gb|AFK46473.1| unknown [Medicago truncatula]
Length = 193
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 68/74 (91%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
MYQLLD+GFIGLIFSC++EDANK+G+IQVIAFQSSDGKQN +S+PI L PVNKS++I ++
Sbjct: 115 MYQLLDSGFIGLIFSCYNEDANKIGKIQVIAFQSSDGKQNSMSRPIPLSPVNKSSIIHID 174
Query: 61 SSLSSSESLSARSG 74
SS SSSE+L+ RSG
Sbjct: 175 SSPSSSENLTTRSG 188
>gi|413946307|gb|AFW78956.1| hypothetical protein ZEAMMB73_817559 [Zea mays]
Length = 226
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 62/89 (69%), Gaps = 8/89 (8%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
M+QLLDTGF+GLIFSCFSEDA KVG+IQV AFQS G+Q+ + P+A+ PV +
Sbjct: 114 MFQLLDTGFVGLIFSCFSEDAQKVGKIQVTAFQSEGGQQHAL--PLAIAPV----IDLDS 167
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSK 89
S SS +L++ S L E EQDTGDS+
Sbjct: 168 SLSSSDNALTSHSA--LVEGMEQDTGDSR 194
>gi|413948302|gb|AFW80951.1| hypothetical protein ZEAMMB73_019879 [Zea mays]
Length = 246
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 62/90 (68%), Gaps = 8/90 (8%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
M+QLLDTGF+GLIFSCFSEDA KVG+IQV AFQS G+Q+ + P+A+ PV +
Sbjct: 114 MFQLLDTGFVGLIFSCFSEDAQKVGKIQVTAFQSEGGQQHPL--PLAIDPV----IDLDS 167
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKI 90
S SS ++ S +V E EQDTGDS++
Sbjct: 168 SCSSSDNVSASHSASV--EGMEQDTGDSRV 195
>gi|308044397|ref|NP_001182943.1| uncharacterized protein LOC100501239 [Zea mays]
gi|238008358|gb|ACR35214.1| unknown [Zea mays]
gi|413948303|gb|AFW80952.1| hypothetical protein ZEAMMB73_019879 [Zea mays]
Length = 193
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 62/90 (68%), Gaps = 8/90 (8%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
M+QLLDTGF+GLIFSCFSEDA KVG+IQV AFQS G+Q+ + P+A+ PV +
Sbjct: 61 MFQLLDTGFVGLIFSCFSEDAQKVGKIQVTAFQSEGGQQHPL--PLAIDPV----IDLDS 114
Query: 61 SSLSSSESLSARSGNVLAENPEQDTGDSKI 90
S SS ++ S +V E EQDTGDS++
Sbjct: 115 SCSSSDNVSASHSASV--EGMEQDTGDSRV 142
>gi|168060631|ref|XP_001782298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666228|gb|EDQ52888.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 471
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 125 YQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTS-SLLKLDSP 183
+ T + G + + S MQ+A+H S L +S AEYVRKEIPL VL ++++
Sbjct: 351 FSTAEKKPPSGSLSTEEDSFKMQKALHLSTLGISEAEYVRKEIPLEVLRGGRRCVEVECT 410
Query: 184 LTSFTDLQRVLYEEERAAYNQAIMQNMSD-GKVHPLTYIHHTSTYQAS 230
L+S +Q L+ EE AAYN A+ Q+ + G++HPL I H+STYQAS
Sbjct: 411 LSSLVAMQETLFTEEHAAYNLAVKQSTNKRGQLHPLAAIQHSSTYQAS 458
>gi|168019295|ref|XP_001762180.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686584|gb|EDQ72972.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 207
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 194 LYEEERAAYNQAIMQNMSD-GKVHPLTYIHHTSTYQASMCKLIEYCLSPAISALQDRLKE 252
L+ EE AAYN A+ Q+ + G++HPL IH +STYQAS+ KL+EYCL P +L DRL++
Sbjct: 92 LFTEEHAAYNLAMKQSTNKRGQLHPLAAIHLSSTYQASLTKLLEYCLCPVSMSLWDRLQQ 151
Query: 253 NEIRLAMLTDEAKSLES 269
N +RL L +EA L++
Sbjct: 152 NNMRLKSLKEEAVLLQA 168
>gi|440798523|gb|ELR19590.1| BRCA1/BRCA2containing complex subunit 3, putative [Acanthamoeba
castellanii str. Neff]
Length = 260
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 70/123 (56%), Gaps = 9/123 (7%)
Query: 159 GAEYVRKEIPLHVLPTSSLLKLDSP--LTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVH 216
GA Y + IPL V+P + ++P L +LQ+++ +E+RA+YN+AI G+VH
Sbjct: 143 GAGYEQVNIPLTVVPPDA----NAPNTLVKLVELQQIIGQEDRASYNEAIA-PAPGGRVH 197
Query: 217 PLTYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESEAFKGSD 276
PL ++ + +Q S+ +L+EY P + L+DR ++N+ RL L E L A K D
Sbjct: 198 PLMEVYSGAVHQKSVARLLEYGSQPLLRLLRDRQEQNKRRLEELRAEKARL--LALKIQD 255
Query: 277 SSL 279
S +
Sbjct: 256 SIM 258
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 31/36 (86%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSD 36
MYQ++D+GFIGLIFSCF+ DA GRIQVIAFQS D
Sbjct: 98 MYQMMDSGFIGLIFSCFNTDAEMNGRIQVIAFQSLD 133
>gi|384245030|gb|EIE18526.1| hypothetical protein COCSUDRAFT_6434, partial [Coccomyxa
subellipsoidea C-169]
Length = 268
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 26/172 (15%)
Query: 119 ARTGGNYQTGDLSNAIGDI------DPMDMSESMQEAMHRS------NLDMSGAEYVRKE 166
RT G+YQ D IG I D + ++ +Q +S L +G ++ R+E
Sbjct: 100 VRTQGSYQMLD-EGFIGIILSTFNQDTAECTQQIQVTAFQSVQQTQHALASAGGQWTRRE 158
Query: 167 IPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQA-----------IMQNMSDGKV 215
+PL V + L L VL+EEER A+ A + G+V
Sbjct: 159 VPLTV--GAELAHPGLQPDGLRVLLEVLFEEERQAFTDASCSRWCKACDGCCMSSRSGRV 216
Query: 216 HPLTYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSL 267
HPLT +HH YQ +C+L+E P +++L+ R E ++ L SL
Sbjct: 217 HPLTAMHHAGVYQQHLCRLMEVVAGPVLASLRGRSAEASLQFEQLQVMKASL 268
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 2 YQLLDTGFIGLIFSCFSED-ANKVGRIQVIAFQSSDGKQNHIS 43
YQ+LD GFIG+I S F++D A +IQV AFQS Q+ ++
Sbjct: 106 YQMLDEGFIGIILSTFNQDTAECTQQIQVTAFQSVQQTQHALA 148
>gi|47214302|emb|CAG00968.1| unnamed protein product [Tetraodon nigroviridis]
Length = 260
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Query: 159 GAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPL 218
G+EY R EIP+HV+P ++ K + L S +L R+L +EE+ Y + S + P+
Sbjct: 151 GSEYERVEIPIHVVPRDAIGK--ACLESAVELPRILCQEEQDTYRKI----HSLAHLDPV 204
Query: 219 TYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
T IH+ S + ++C + P + L+DRL++N+ L L E + L+ E
Sbjct: 205 TKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNKQSLMQLQREKERLQQE 256
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQ----NHISKPIALLPVNKST 55
MYQ+LD F+GLIFSCF ED N K GR+ FQS ++ + PI ++P +
Sbjct: 111 MYQMLDQCFVGLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERVEIPIHVVPRDAIG 170
Query: 56 VIDLESSL 63
LES++
Sbjct: 171 KACLESAV 178
>gi|62858255|ref|NP_001016457.1| lys-63-specific deubiquitinase BRCC36 [Xenopus (Silurana)
tropicalis]
gi|82228613|sp|Q4VA72.1|BRCC3_XENTR RecName: Full=Lys-63-specific deubiquitinase BRCC36; AltName:
Full=BRCA1-A complex subunit BRCC36; AltName:
Full=BRCA1/BRCA2-containing complex subunit 3; AltName:
Full=BRCA1/BRCA2-containing complex subunit 36; AltName:
Full=BRISC complex subunit BRCC36
gi|66792574|gb|AAH96514.1| c6.1a protein [Xenopus (Silurana) tropicalis]
gi|89272829|emb|CAJ82080.1| chromosome X open reading frame 53 [Xenopus (Silurana) tropicalis]
Length = 261
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GRI FQS +++ I P+ ++P N
Sbjct: 111 MYQMMDVGFVGLIFSCFIEDKNTKTGRILYTCFQSVQAQKSSEYERIEVPLHVVPHNTIR 170
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 171 KVCLESAV 178
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R E+PLHV+P +++ K+ L S +L R+L +EE+ AY + S G + +T
Sbjct: 152 SEYERIEVPLHVVPHNTIRKV--CLESAVELPRILCQEEQDAYRRI----HSLGHLDSIT 205
Query: 220 YIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
IH+ S + ++C + P + L+DRL++N+ R L E + L E
Sbjct: 206 KIHNGSVFTKNLCGQMSAISGPLLQWLEDRLEQNQQRAQELQSEKEQLLQE 256
>gi|147905921|ref|NP_001087827.1| lys-63-specific deubiquitinase BRCC36 [Xenopus laevis]
gi|82181046|sp|Q66GV6.1|BRCC3_XENLA RecName: Full=Lys-63-specific deubiquitinase BRCC36; AltName:
Full=BRCA1-A complex subunit BRCC36; AltName:
Full=BRCA1/BRCA2-containing complex subunit 3; AltName:
Full=BRCA1/BRCA2-containing complex subunit 36; AltName:
Full=BRISC complex subunit BRCC36
gi|51859248|gb|AAH82208.1| MGC99130 protein [Xenopus laevis]
Length = 261
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GRI FQS +++ I P+ ++P N
Sbjct: 111 MYQMMDVGFVGLIFSCFIEDKNTKTGRILYTCFQSVQAQKSSEYERIEVPLHVVPHNTIR 170
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 171 KVCLESAV 178
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R E+PLHV+P +++ K+ L S +L R+L +EE+ AY + S G + +T
Sbjct: 152 SEYERIEVPLHVVPHNTIRKV--CLESAVELPRILCQEEQDAYRRI----HSLGHLDSIT 205
Query: 220 YIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
IH+ S + ++C + P + L+DRL++N R L E + L E
Sbjct: 206 KIHNGSVFTKNLCGQMSAISGPLLQWLEDRLEQNRQRAQELQSEKEQLLQE 256
>gi|327286252|ref|XP_003227845.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Anolis
carolinensis]
Length = 261
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GRI FQS +++ I PI ++P N
Sbjct: 111 MYQMMDQGFVGLIFSCFIEDKNTKTGRILYTCFQSIQAQKSSEYERIEIPIHVVPHNTIG 170
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 171 KVCLESAV 178
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 18/117 (15%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+HV+P +++ K+ L S +L ++L +EE+ AY K+H LT
Sbjct: 152 SEYERIEIPIHVVPHNTIGKV--CLESAVELPKILCQEEQDAYR----------KIHSLT 199
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
+ IH+ S + ++C + P + L+DRL++N+ R+ L E + L E
Sbjct: 200 HLDSITKIHNGSVFTKNLCSQMSAISGPLLQWLEDRLEQNKQRMLELQQEKEELLKE 256
>gi|387014794|gb|AFJ49516.1| Lys-63-specific deubiquitinase BRCC36-like [Crotalus adamanteus]
Length = 261
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P N
Sbjct: 111 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHVVPHNTIG 170
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 171 KVCLESAV 178
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 18/104 (17%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+HV+P +++ K+ L S +L ++L +EE+ AY K+H LT
Sbjct: 152 SEYERIEIPIHVVPHNTIGKV--CLESAVELPKILCQEEQDAYR----------KIHSLT 199
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRL 257
+ IH+ S + ++C + P + L+DRL++N+ R+
Sbjct: 200 HLDSITKIHNGSVFTKNLCSQMSAISGPLLQWLEDRLEQNKQRM 243
>gi|348505122|ref|XP_003440110.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Oreochromis
niloticus]
Length = 260
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 159 GAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPL 218
G+EY R EIP+HVLP ++ K+ L S +L R+L +EE+ Y + S + P+
Sbjct: 151 GSEYERVEIPIHVLPREAIGKV--CLESAVELPRILCQEEQDTYRKI----HSLAHLDPV 204
Query: 219 TYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
T IH+ S + ++C + P + L+DRL++N+ + L E + L E
Sbjct: 205 TKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQHSILELQREKEKLMQE 256
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQ----NHISKPIALLPVNKST 55
MYQ+LD F+GLIFSCF ED N K GR+ FQS ++ + PI +LP
Sbjct: 111 MYQMLDQCFVGLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERVEIPIHVLPREAIG 170
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 171 KVCLESAV 178
>gi|405969742|gb|EKC34695.1| Lys-63-specific deubiquitinase BRCC36 [Crassostrea gigas]
Length = 263
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Query: 155 LDMSGAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGK 214
+D +Y R E+PLH++P+S L K + L S +L ++L +EE Y +A +D
Sbjct: 150 MDGYPPQYARVEVPLHIVPSSGLGK--ACLESLIELPKILCQEEEEEYKKAT----ADPD 203
Query: 215 VHPLTYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAML 260
+ +T + ++S + S+C ++E P I +L+ RL++N ++A L
Sbjct: 204 LDLITKLQNSSVFTKSLCHIMEVMHGPLIQSLESRLEQNNAKIAEL 249
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSED-ANKVGRIQVIAFQS 34
MYQ++D GFIGLIFS F+ED + K R Q+ FQS
Sbjct: 111 MYQMMDEGFIGLIFSVFNEDKSTKSYRHQLTCFQS 145
>gi|354492592|ref|XP_003508431.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Cricetulus
griseus]
gi|344251134|gb|EGW07238.1| Lys-63-specific deubiquitinase BRCC36-like [Cricetulus griseus]
Length = 291
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 156 DMSGAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKV 215
D +EY R EIP+H++P +++ K+ LTS +L R+L +EE+ AY + D
Sbjct: 178 DPKSSEYERIEIPIHIVPHTTIGKV--CLTSAVELPRILCQEEQDAYRRIHKLTHLDS-- 233
Query: 216 HPLTYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
LT IH+ S + +C + P + L++RL++N+ L L E + L E
Sbjct: 234 --LTKIHNGSVFTKHLCSQMSAICGPLLQWLENRLEQNQQHLQELEQEKEGLMEE 286
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 1 MYQLLDTGFIGLIFSCFSED-ANKVGRIQVIAFQS----SDGKQNHISKPIALLP 50
MYQ++D GF+GLIF+CF ED K GR+ FQ+ + I PI ++P
Sbjct: 141 MYQMMDQGFVGLIFACFIEDKTTKTGRVLYTCFQAIQDPKSSEYERIEIPIHIVP 195
>gi|345328458|ref|XP_001514615.2| PREDICTED: lys-63-specific deubiquitinase BRCC36-like
[Ornithorhynchus anatinus]
Length = 261
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GRI FQS +++ I PI ++P +
Sbjct: 111 MYQMMDQGFVGLIFSCFIEDKNTKTGRILYTCFQSIQAQKSSEYERIEIPIHVVPHDTIG 170
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 171 KVCLESAV 178
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 18/117 (15%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+HV+P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 152 SEYERIEIPIHVVPHDTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 199
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
+ IH+ S + ++C + P + L+DRL++N+ R+ L E L E
Sbjct: 200 HLDSVTKIHNGSVFTKNLCSQMSAISGPLLQWLEDRLEQNKQRVQELQREKDELLRE 256
>gi|449499182|ref|XP_004176527.1| PREDICTED: LOW QUALITY PROTEIN: lys-63-specific deubiquitinase
BRCC36 [Taeniopygia guttata]
Length = 261
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GRI FQS +++ I PI ++P
Sbjct: 111 MYQMMDQGFVGLIFSCFIEDKNTKTGRILYTCFQSVQAQKSSEYERIEIPIHVVPHETIG 170
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 171 KVCLESAV 178
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 18/117 (15%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+HV+P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 152 SEYERIEIPIHVVPHETIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 199
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
+ IH+ S + ++C + P + L+DRL++N+ RL L E + L E
Sbjct: 200 HLDSVTKIHNGSVFTKNLCSQMSAISGPLLQWLEDRLEQNKQRLQELQQEKEQLLEE 256
>gi|363732732|ref|XP_420195.3| PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform 2 [Gallus
gallus]
Length = 286
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GRI FQS +++ I PI ++P
Sbjct: 136 MYQMMDQGFVGLIFSCFIEDKNTKTGRILYTCFQSIQAQKSSEYERIEIPIHVVPHETIG 195
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 196 KVCLESAV 203
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 18/117 (15%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+HV+P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 177 SEYERIEIPIHVVPHETIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 224
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
+ IH+ S + ++C + P + L+DRL++N+ R+ L E + L E
Sbjct: 225 HLDSVTKIHNGSVFTKNLCSQMSAISGPLLQWLEDRLEQNKQRVQELQQEKEQLLEE 281
>gi|292625820|ref|XP_002666137.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Danio rerio]
Length = 260
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 159 GAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPL 218
G+EY R EIP+HV+P ++ K+ L S +L R+L +EE+ Y + S + P+
Sbjct: 151 GSEYERIEIPIHVVPHEAIGKV--CLESAVELPRILCQEEQDTYRRI----HSLTHLDPI 204
Query: 219 TYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
T IH+ S + ++C + P + L+DRL++N+ + L E + L E
Sbjct: 205 TKIHNGSVFTKNLCSQMSAISGPLLQWLEDRLEQNKQSIITLQKEKELLTQE 256
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQ----NHISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS ++ I PI ++P
Sbjct: 111 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERIEIPIHVVPHEAIG 170
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 171 KVCLESAV 178
>gi|363732730|ref|XP_003641144.1| PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform 1 [Gallus
gallus]
Length = 261
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GRI FQS +++ I PI ++P
Sbjct: 111 MYQMMDQGFVGLIFSCFIEDKNTKTGRILYTCFQSIQAQKSSEYERIEIPIHVVPHETIG 170
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 171 KVCLESAV 178
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 18/117 (15%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+HV+P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 152 SEYERIEIPIHVVPHETIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 199
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
+ IH+ S + ++C + P + L+DRL++N+ R+ L E + L E
Sbjct: 200 HLDSVTKIHNGSVFTKNLCSQMSAISGPLLQWLEDRLEQNKQRVQELQQEKEQLLEE 256
>gi|432889267|ref|XP_004075192.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Oryzias
latipes]
Length = 260
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQ----NHISKPIALLPVNKST 55
MYQ+LD GF+GLIFSCF ED N + GR+ FQS+ ++ + P+ ++P
Sbjct: 111 MYQMLDQGFVGLIFSCFIEDKNTRTGRVLYTCFQSAQAQKGSEYERVEIPVHVVPREAIG 170
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 171 RVCLESAV 178
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 159 GAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVH-- 216
G+EY R EIP+HV+P ++ ++ L S +L R+L +EE+ Y + G H
Sbjct: 151 GSEYERVEIPVHVVPREAIGRV--CLESAVELPRILCQEEQDTYRRI------HGLAHLD 202
Query: 217 PLTYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
P+T IH+ S + ++C + P + L+DRL+ N +A L E ++L E
Sbjct: 203 PVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEHNRRSIADLQREKEALLRE 256
>gi|334324549|ref|XP_001363008.2| PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Monodelphis
domestica]
Length = 261
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P +
Sbjct: 111 MYQMMDQGFVGLIFSCFIEDKNTKTGRLLYTCFQSVQAQKSTDYERIEIPIHVVPHDTIG 170
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 171 KVCLESAI 178
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Query: 161 EYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY 220
+Y R EIP+HV+P ++ K+ L S +L ++L +EE+ AY + S + +T
Sbjct: 153 DYERIEIPIHVVPHDTIGKV--CLESAIELPKILCQEEQDAYRRI----HSLPHLDSVTM 206
Query: 221 IHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
IH+ S + ++C + P + L+DRL++N+ R+ L E + L E
Sbjct: 207 IHNGSVFTKNLCSQMSAISGPLLQWLEDRLEQNQQRVRELQREKERLLQE 256
>gi|213512917|ref|NP_001134356.1| lys-63-specific deubiquitinase BRCC36 [Salmo salar]
gi|229621691|sp|B5X8M4.1|BRCC3_SALSA RecName: Full=Lys-63-specific deubiquitinase BRCC36; AltName:
Full=BRCA1-A complex subunit BRCC36; AltName:
Full=BRCA1/BRCA2-containing complex subunit 3; AltName:
Full=BRCA1/BRCA2-containing complex subunit 36; AltName:
Full=BRISC complex subunit BRCC36
gi|209732650|gb|ACI67194.1| BRCA1/BRCA2-containing complex subunit 3 [Salmo salar]
Length = 260
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQ----NHISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS ++ I PI ++P
Sbjct: 111 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERIEIPIHVVPHEAIG 170
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 171 KVCLESAV 178
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 159 GAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPL 218
G+EY R EIP+HV+P ++ K+ L S +L R+L +EE+ Y + S + P+
Sbjct: 151 GSEYERIEIPIHVVPHEAIGKV--CLESAVELPRILCQEEQDTYRKI----HSLTHLDPI 204
Query: 219 TYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
T IH+ S + ++C + P + L+DRL++N + L E + L E
Sbjct: 205 TKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNRQSVIELQLEKERLTQE 256
>gi|410927826|ref|XP_003977341.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Takifugu
rubripes]
Length = 260
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 159 GAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPL 218
G+EY R EIP+HV+P ++ K + L S +L R+L +EE+ Y + S + +
Sbjct: 151 GSEYERVEIPIHVVPRDAIGK--ACLESAVELPRILCQEEQDTYRKI----HSLAHLDSV 204
Query: 219 TYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
T IH+ S + ++C + P + L+DRL++N+ L L E + L+ E
Sbjct: 205 TKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNKQSLLQLQREKERLQQE 256
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQ----NHISKPIALLPVNKST 55
MYQ+LD F+GLIFSCF ED N K GRI FQS ++ + PI ++P +
Sbjct: 111 MYQMLDQCFVGLIFSCFIEDKNTKTGRILYTCFQSVQAQKGSEYERVEIPIHVVPRDAIG 170
Query: 56 VIDLESSL 63
LES++
Sbjct: 171 KACLESAV 178
>gi|119593041|gb|EAW72635.1| BRCA1/BRCA2-containing complex, subunit 3, isoform CRA_d [Homo
sapiens]
Length = 288
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 138 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 197
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 198 KVCLESAV 205
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 179 SEYERIEIPIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 226
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 227 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 264
>gi|226955365|gb|ACO95360.1| BRCA1/BRCA2-containing complex, subunit 3 isoform 1 (predicted)
[Dasypus novemcinctus]
Length = 288
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 138 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 197
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 198 KVCLESAV 205
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 179 SEYERIEIPIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 226
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 227 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 264
>gi|403301698|ref|XP_003941521.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Saimiri
boliviensis boliviensis]
Length = 291
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 200
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 201 KVCLESAV 208
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 18/117 (15%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 182 SEYERIEIPIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 229
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
+ IH+ S + ++C + P + L+DRL++N+ L L E + L E
Sbjct: 230 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLRELQQEKEELMQE 286
>gi|291411958|ref|XP_002722251.1| PREDICTED: BRCA1/BRCA2-containing complex, subunit 3 [Oryctolagus
cuniculus]
Length = 291
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 200
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 201 KVCLESAV 208
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 182 SEYERIEIPIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 229
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 230 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 267
>gi|397477280|ref|XP_003810001.1| PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform 2 [Pan
paniscus]
gi|410057213|ref|XP_521347.4| PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform 2 [Pan
troglodytes]
Length = 292
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 142 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 201
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 202 KVCLESAV 209
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 183 SEYERIEIPIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 230
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 231 HLDSVTKIHNGSVFTKNLCSQMSAISGPLLQWLEDRLE 268
>gi|355757846|gb|EHH61371.1| hypothetical protein EGM_19371 [Macaca fascicularis]
Length = 297
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 147 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 206
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 207 KVCLESAV 214
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S L ++L +EE+ AY ++H LT
Sbjct: 188 SEYERIEIPIHIVPHVTIGKV--CLESAVQLPKILCQEEQDAYR----------RIHSLT 235
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 236 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 273
>gi|119593040|gb|EAW72634.1| BRCA1/BRCA2-containing complex, subunit 3, isoform CRA_c [Homo
sapiens]
Length = 291
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 200
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 201 KVCLESAV 208
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 182 SEYERIEIPIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 229
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 230 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 267
>gi|426398037|ref|XP_004065209.1| PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform 2 [Gorilla
gorilla gorilla]
Length = 292
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 142 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 201
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 202 KVCLESAV 209
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 183 SEYERIEIPIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 230
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 231 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 268
>gi|64762484|ref|NP_001018065.1| lys-63-specific deubiquitinase BRCC36 isoform 2 [Homo sapiens]
gi|36088|emb|CAA45917.1| C6.1A [Homo sapiens]
Length = 291
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 200
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 201 KVCLESAV 208
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 182 SEYERIEIPIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 229
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 230 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 267
>gi|417398458|gb|JAA46262.1| Putative lys-63-specific deubiquitinase brcc36 [Desmodus rotundus]
Length = 291
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 200
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 201 KVCLESAV 208
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 18/101 (17%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 182 SEYERIEIPIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 229
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLKENE 254
+ IH+ S + ++C + P + L+DRL++N+
Sbjct: 230 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQ 270
>gi|395861009|ref|XP_003802787.1| PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform 1
[Otolemur garnettii]
Length = 291
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 200
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 201 KVCLESAV 208
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 182 SEYERIEIPIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 229
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 230 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 267
>gi|410214268|gb|JAA04353.1| BRCA1/BRCA2-containing complex, subunit 3 [Pan troglodytes]
gi|410255810|gb|JAA15872.1| BRCA1/BRCA2-containing complex, subunit 3 [Pan troglodytes]
gi|410255816|gb|JAA15875.1| BRCA1/BRCA2-containing complex, subunit 3 [Pan troglodytes]
gi|410355741|gb|JAA44474.1| BRCA1/BRCA2-containing complex, subunit 3 [Pan troglodytes]
gi|410355745|gb|JAA44476.1| BRCA1/BRCA2-containing complex, subunit 3 [Pan troglodytes]
Length = 291
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 200
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 201 KVCLESAV 208
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 182 SEYERIEIPIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 229
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 230 HLDSVTKIHNGSVFTKNLCSQMSAISGPLLQWLEDRLE 267
>gi|355705309|gb|EHH31234.1| hypothetical protein EGK_21123 [Macaca mulatta]
Length = 297
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 147 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 206
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 207 KVCLESAV 214
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S L ++L +EE+ AY ++H LT
Sbjct: 188 SEYERIEIPIHIVPHVTIGKV--CLESAVQLPKILCQEEQDAYR----------RIHSLT 235
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 236 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 273
>gi|338729709|ref|XP_003365962.1| PREDICTED: lys-63-specific deubiquitinase BRCC36 [Equus caballus]
gi|335772630|gb|AEH58130.1| Lys-63-specific deubiquitinase BRCC36-like protein [Equus caballus]
Length = 291
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 200
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 201 KVCLESAV 208
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 182 SEYERIEIPIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 229
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 230 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 267
>gi|336285487|ref|NP_001229569.1| lys-63-specific deubiquitinase BRCC36 isoform 3 [Homo sapiens]
gi|441675674|ref|XP_003279383.2| PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform 2
[Nomascus leucogenys]
gi|194387648|dbj|BAG61237.1| unnamed protein product [Homo sapiens]
Length = 292
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 142 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 201
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 202 KVCLESAV 209
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 183 SEYERIEIPIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 230
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 231 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 268
>gi|380783837|gb|AFE63794.1| lys-63-specific deubiquitinase BRCC36 isoform 2 [Macaca mulatta]
gi|383421547|gb|AFH33987.1| lys-63-specific deubiquitinase BRCC36 isoform 2 [Macaca mulatta]
gi|383421549|gb|AFH33988.1| lys-63-specific deubiquitinase BRCC36 isoform 2 [Macaca mulatta]
gi|383421551|gb|AFH33989.1| lys-63-specific deubiquitinase BRCC36 isoform 2 [Macaca mulatta]
gi|383421553|gb|AFH33990.1| lys-63-specific deubiquitinase BRCC36 isoform 2 [Macaca mulatta]
gi|383421555|gb|AFH33991.1| lys-63-specific deubiquitinase BRCC36 isoform 2 [Macaca mulatta]
gi|384944476|gb|AFI35843.1| lys-63-specific deubiquitinase BRCC36 isoform 2 [Macaca mulatta]
Length = 291
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 200
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 201 KVCLESAV 208
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 182 SEYERIEIPIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 229
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 230 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 267
>gi|297305140|ref|XP_001097957.2| PREDICTED: lys-63-specific deubiquitinase BRCC36 [Macaca mulatta]
Length = 292
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 142 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 201
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 202 KVCLESAV 209
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 183 SEYERIEIPIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 230
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 231 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 268
>gi|359324112|ref|XP_003640289.1| PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform 1 [Canis
lupus familiaris]
Length = 291
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 200
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 201 KVCLESAV 208
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 182 SEYERIEIPIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 229
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 230 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 267
>gi|301789766|ref|XP_002930298.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like isoform 2
[Ailuropoda melanoleuca]
Length = 291
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 200
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 201 KVCLESAV 208
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 182 SEYERIEIPIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 229
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 230 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 267
>gi|344306240|ref|XP_003421796.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like isoform 3
[Loxodonta africana]
Length = 289
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 139 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 198
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 199 RVCLESAV 206
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 18/117 (15%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ ++ L S +L ++L +EE+ AY ++H LT
Sbjct: 180 SEYERIEIPIHIVPHVTIGRV--CLESAVELPKILCQEEQDAYR----------RIHSLT 227
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
+ IH+ S + ++C + P + L+DRL++N+ L L E + L E
Sbjct: 228 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLQELQREKEELMQE 284
>gi|344306238|ref|XP_003421795.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like isoform 2
[Loxodonta africana]
Length = 288
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 138 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 197
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 198 RVCLESAV 205
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 18/117 (15%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ ++ L S +L ++L +EE+ AY ++H LT
Sbjct: 179 SEYERIEIPIHIVPHVTIGRV--CLESAVELPKILCQEEQDAYR----------RIHSLT 226
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
+ IH+ S + ++C + P + L+DRL++N+ L L E + L E
Sbjct: 227 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLQELQREKEELMQE 283
>gi|339895836|ref|NP_001229952.1| BRCA1/BRCA2-containing complex, subunit 3 [Sus scrofa]
Length = 291
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHVVPHVAVG 200
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 201 KVCLESAV 208
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+HV+P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 182 SEYERIEIPIHVVPHVAVGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 229
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 230 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 267
>gi|12848275|dbj|BAB27894.1| unnamed protein product [Mus musculus]
Length = 291
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHITIG 200
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 201 KVCLESAV 208
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 182 SEYERIEIPIHIVPHITIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 229
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 230 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 267
>gi|22165366|ref|NP_666068.1| lys-63-specific deubiquitinase BRCC36 [Mus musculus]
gi|262050563|ref|NP_001159929.1| lys-63-specific deubiquitinase BRCC36 [Mus musculus]
gi|262050570|ref|NP_001159931.1| lys-63-specific deubiquitinase BRCC36 [Mus musculus]
gi|1168720|sp|P46737.1|BRCC3_MOUSE RecName: Full=Lys-63-specific deubiquitinase BRCC36; AltName:
Full=BRCA1-A complex subunit BRCC36; AltName:
Full=BRCA1/BRCA2-containing complex subunit 3; AltName:
Full=BRCA1/BRCA2-containing complex subunit 36; AltName:
Full=BRISC complex subunit BRCC36
gi|8248943|gb|AAB29006.2| c6.1A [Mus sp.]
gi|18203926|gb|AAH21313.1| BRCA1/BRCA2-containing complex, subunit 3 [Mus musculus]
gi|26326723|dbj|BAC27105.1| unnamed protein product [Mus musculus]
gi|26332903|dbj|BAC30169.1| unnamed protein product [Mus musculus]
gi|55930890|gb|AAH48179.1| BRCA1/BRCA2-containing complex, subunit 3 [Mus musculus]
Length = 291
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHITIG 200
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 201 KVCLESAV 208
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 182 SEYERIEIPIHIVPHITIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 229
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 230 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 267
>gi|115495257|ref|NP_001069258.1| lys-63-specific deubiquitinase BRCC36 [Bos taurus]
gi|61554599|gb|AAX46584.1| chromosome X open reading frame 53 [Bos taurus]
gi|296471113|tpg|DAA13228.1| TPA: lys-63-specific deubiquitinase BRCC36 [Bos taurus]
Length = 291
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 200
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 201 KVCLESAV 208
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 18/117 (15%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 182 SEYERIEIPIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 229
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
+ IH+ S + ++C + P + L+DRL++N+ + L E + L E
Sbjct: 230 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHVQELQQEKEELLQE 286
>gi|184185517|gb|ACC68920.1| BRCA1/BRCA2-containing complex, subunit 3 (predicted) [Rhinolophus
ferrumequinum]
Length = 238
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 88 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 147
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 148 KVCLESAV 155
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 129 SEYERIEIPIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 176
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 177 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 214
>gi|148697276|gb|EDL29223.1| BRCA1/BRCA2-containing complex, subunit 3 [Mus musculus]
Length = 291
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHITIG 200
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 201 KVCLESAV 208
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 182 SEYERIEIPIHIVPHITIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 229
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 230 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 267
>gi|74208006|dbj|BAE29117.1| unnamed protein product [Mus musculus]
Length = 291
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLP 50
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVP 195
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P ++ ++ L S +L ++L +EE+ AY ++H LT
Sbjct: 182 SEYERIEIPIHIVPHITIGEV--CLESAVELPKILCQEEQDAYR----------RIHSLT 229
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
+ IH+ S + ++C + P + L+DRL+
Sbjct: 230 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 267
>gi|198278575|ref|NP_001120772.1| lys-63-specific deubiquitinase BRCC36 [Rattus norvegicus]
gi|229621690|sp|B2RYM5.1|BRCC3_RAT RecName: Full=Lys-63-specific deubiquitinase BRCC36; AltName:
Full=BRCA1-A complex subunit BRCC36; AltName:
Full=BRCA1/BRCA2-containing complex subunit 3; AltName:
Full=BRCA1/BRCA2-containing complex subunit 36; AltName:
Full=BRISC complex subunit BRCC36
gi|149028136|gb|EDL83574.1| rCG63066 [Rattus norvegicus]
gi|187469165|gb|AAI66833.1| Brcc3 protein [Rattus norvegicus]
Length = 291
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I P+ ++P
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSVQAQKSSDYERIEIPVHVVPHVTIG 200
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 201 KVCLESAV 208
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 18/117 (15%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
++Y R EIP+HV+P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 182 SDYERIEIPVHVVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 229
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
+ IH+ S + ++C + P + L+DRL++N+ L L E + L +E
Sbjct: 230 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLRELQREKEELMAE 286
>gi|326918806|ref|XP_003205677.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Meleagris
gallopavo]
Length = 247
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GRI FQS +++ PI ++P
Sbjct: 97 MYQMMDQGFVGLIFSCFIEDKNTKTGRILYTCFQSIQAQKSSEYERFEIPIHVVPHETIG 156
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 157 KVCLESAV 164
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 18/117 (15%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+HV+P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 138 SEYERFEIPIHVVPHETIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 185
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
+ IH+ S + ++C + P + L+DRL++N+ R+ L E + L E
Sbjct: 186 HLDSVTKIHNGSVFTKNLCSQMSAISGPLLQWLEDRLEQNKQRVQELQQEKEQLLEE 242
>gi|390363351|ref|XP_003730349.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like isoform 1
[Strongylocentrotus purpuratus]
Length = 265
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Query: 154 NLDMSGAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDG 213
N D +Y R EI LH++P + + + L + +L R+L EE AY +A SD
Sbjct: 149 NPDGEAPQYERLEIALHIIPQQTFGR--ACLDALAELPRILTMEEGEAYGKA-----SDS 201
Query: 214 -KVHPLTYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESEAF 272
+ H LT IH+ + Y S+C +E P + L++RL++N + + E K L E
Sbjct: 202 TQGHLLTAIHNGAVYTKSVCHQLERLTGPLLQTLENRLEKNMQLIEDMEREKKQLMEELK 261
Query: 273 KGS 275
GS
Sbjct: 262 TGS 264
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 2 YQLLDTGFIGLIFSCFSED-ANKVGRIQVIAFQS 34
YQLLD F+GLIFSCF++D + G IQV FQS
Sbjct: 112 YQLLDECFVGLIFSCFNDDNSTNQGLIQVTCFQS 145
>gi|390363353|ref|XP_780255.3| PREDICTED: lys-63-specific deubiquitinase BRCC36-like isoform 2
[Strongylocentrotus purpuratus]
Length = 265
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Query: 154 NLDMSGAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDG 213
N D +Y R EI LH++P + + + L + +L R+L EE AY +A SD
Sbjct: 149 NPDGEAPQYDRLEIALHIIPQQTFGR--ACLDALAELPRILTMEEGEAYGKA-----SDS 201
Query: 214 -KVHPLTYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESEAF 272
+ H LT IH+ + Y S+C +E P + L++RL++N + + E K L E
Sbjct: 202 TQGHLLTAIHNGAVYTKSVCHQLERLTGPLLQTLENRLEKNMQLIEDMEREKKQLMEELK 261
Query: 273 KGS 275
GS
Sbjct: 262 TGS 264
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 2 YQLLDTGFIGLIFSCFSED-ANKVGRIQVIAFQS 34
YQLLD F+GLIFSCF++D + G IQV FQS
Sbjct: 112 YQLLDECFVGLIFSCFNDDNSTNQGLIQVTCFQS 145
>gi|197215696|gb|ACH53085.1| BRCA1/BRCA2-containing complex subunit 3 (predicted) [Otolemur
garnettii]
Length = 128
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++ I PI ++P
Sbjct: 28 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIG 87
Query: 56 VIDLESSL 63
+ LES++
Sbjct: 88 KVCLESAV 95
>gi|119605504|gb|EAW85098.1| hCG1980674, isoform CRA_b [Homo sapiens]
Length = 119
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HISKPIALLP 50
MYQ++D GF+GLIFSCF ED N + GR+ FQS +++ I PI ++P
Sbjct: 27 MYQMMDQGFVGLIFSCFIEDKNTRAGRVLYTCFQSIQAQKSSEYERIEIPIHIVP 81
>gi|334349676|ref|XP_001369011.2| PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Monodelphis
domestica]
Length = 261
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQ----NHISKPIALLP 50
MYQ++D F+GLIFSCF ED N K GRI FQS+ ++ + P+ ++P
Sbjct: 111 MYQMMDESFVGLIFSCFVEDKNTKTGRILYTCFQSTQAQKGSEYERVDVPLHVVP 165
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 18/101 (17%)
Query: 159 GAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPL 218
G+EY R ++PLHV+P ++ K + L + +L R+L +EE+ AY K+H L
Sbjct: 151 GSEYERVDVPLHVVPQETMGK--ASLEAAIELPRILCQEEQDAYR----------KIHSL 198
Query: 219 TY------IHHTSTYQASMCKLIEYCLSPAISALQDRLKEN 253
T+ IH+ S + ++C + P + L+DR N
Sbjct: 199 THLDAVTKIHNGSVFTKNLCNQMSAISGPLMQWLEDRRDYN 239
>gi|449267894|gb|EMC78785.1| Lys-63-specific deubiquitinase BRCC36, partial [Columba livia]
Length = 217
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GRI FQS +++
Sbjct: 37 MYQMMDQGFVGLIFSCFIEDKNTKTGRILYTCFQSIQAQKS 77
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 18/117 (15%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+ Y R EIP+HV+P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 108 SRYERIEIPIHVVPHETIGKVC--LESAIELPKILCQEEQDAYR----------RIHSLT 155
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
+ IH+ S + ++C + P + L+DRL++N+ R+ L E + L E
Sbjct: 156 HLDSVTKIHNGSVFTKNLCSQMSAISGPLLQWLEDRLEQNKQRVQELQQEKEQLLEE 212
>gi|395546500|ref|XP_003775106.1| PREDICTED: lys-63-specific deubiquitinase BRCC36 [Sarcophilus
harrisii]
Length = 231
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQ----NHISKPIALLPVNKST 55
MYQ++D F+GLIFSCF ED N K GR+ FQS ++ + P+ +LP +
Sbjct: 81 MYQMMDESFVGLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERVDVPLHVLPQDTMG 140
Query: 56 VIDLESSL 63
LE+++
Sbjct: 141 KASLEAAI 148
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 18/101 (17%)
Query: 159 GAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPL 218
G+EY R ++PLHVLP ++ K + L + +L ++L +EE+ AY K+H L
Sbjct: 121 GSEYERVDVPLHVLPQDTMGK--ASLEAAIELPKILCQEEQDAYR----------KIHSL 168
Query: 219 TY------IHHTSTYQASMCKLIEYCLSPAISALQDRLKEN 253
T+ IH+ S + ++C + P + L+DR N
Sbjct: 169 THLDAVTKIHNGSVFTKNLCNQMSAISGPLMQWLEDRRDYN 209
>gi|45361707|ref|NP_988991.1| lys-63-specific deubiquitinase BRCC36-like [Mus musculus]
gi|81865180|sp|Q7M757.1|BRC3L_MOUSE RecName: Full=Lys-63-specific deubiquitinase BRCC36-like
gi|33186814|tpe|CAD67592.1| TPA: putative C6.1A-like protease [Mus musculus]
gi|111306604|gb|AAI20509.1| Predicted gene, EG368203 [Mus musculus]
gi|111308684|gb|AAI20507.1| Predicted gene, EG368203 [Mus musculus]
Length = 291
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 18/117 (15%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P +++ + L S +L +L +EE+ AY ++H LT
Sbjct: 182 SEYERLEIPIHIVPRTTIGTV--CLRSAIELPGILCQEEQEAYR----------RIHGLT 229
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
+ IH+ S + +C + P + L+DRL++N+ RL L E + L E
Sbjct: 230 HLDSVTKIHNGSVFTKHLCSQMSAVCGPLLQWLEDRLEQNQQRLQELEQEKEDLMEE 286
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDA-NKVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D F+GLIF+CF ED K+GR+ FQS ++ + PI ++P
Sbjct: 141 MYQMMDQSFVGLIFACFIEDKPTKIGRVLYTCFQSVQASKSSEYERLEIPIHIVPRTTIG 200
Query: 56 VIDLESSL 63
+ L S++
Sbjct: 201 TVCLRSAI 208
>gi|7709922|gb|AAB29005.2| c6.1A [Homo sapiens]
Length = 321
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 146 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 186
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 18/90 (20%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 220 PIHIVPHVTIWKV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 267
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLK 251
H+ S + ++C + P + L+DRL+
Sbjct: 268 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 297
>gi|167045839|gb|ABZ10507.1| BRCA1/BRCA2-containing complex, subunit 3 isoform 1 (predicted)
[Callithrix jacchus]
Length = 322
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 147 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 187
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 18/109 (16%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 221 PIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 268
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
H+ S + ++C + P + L+DRL++N+ L L E + L E
Sbjct: 269 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLRELQQEKEELMQE 317
>gi|119593042|gb|EAW72636.1| BRCA1/BRCA2-containing complex, subunit 3, isoform CRA_e [Homo
sapiens]
gi|119593043|gb|EAW72637.1| BRCA1/BRCA2-containing complex, subunit 3, isoform CRA_e [Homo
sapiens]
Length = 258
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 83 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 123
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 18/90 (20%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 157 PIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 204
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLK 251
H+ S + ++C + P + L+DRL+
Sbjct: 205 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 234
>gi|355673405|gb|AER95162.1| BRCA1/BRCA2-containing complex, subunit 3 [Mustela putorius furo]
Length = 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 61 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 101
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 18/90 (20%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 135 PIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 182
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLK 251
H+ S + ++C + P + L+DRL+
Sbjct: 183 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 212
>gi|390480411|ref|XP_002763484.2| PREDICTED: LOW QUALITY PROTEIN: lys-63-specific deubiquitinase
BRCC36-like [Callithrix jacchus]
Length = 316
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 181
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 18/109 (16%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 215 PIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 262
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
H+ S + ++C + P + L+DRL++N+ L L E + L E
Sbjct: 263 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLRELQQEKEELMQE 311
>gi|281347943|gb|EFB23527.1| hypothetical protein PANDA_020693 [Ailuropoda melanoleuca]
Length = 313
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 138 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 178
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 18/90 (20%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 212 PIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 259
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLK 251
H+ S + ++C + P + L+DRL+
Sbjct: 260 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 289
>gi|119593038|gb|EAW72632.1| BRCA1/BRCA2-containing complex, subunit 3, isoform CRA_a [Homo
sapiens]
Length = 313
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 138 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 178
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 18/90 (20%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 212 PIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 259
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLK 251
H+ S + ++C + P + L+DRL+
Sbjct: 260 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 289
>gi|229621712|sp|B0KWU8.2|BRCC3_CALJA RecName: Full=Lys-63-specific deubiquitinase BRCC36; AltName:
Full=BRCA1-A complex subunit BRCC36; AltName:
Full=BRCA1/BRCA2-containing complex subunit 3; AltName:
Full=BRCA1/BRCA2-containing complex subunit 36; AltName:
Full=BRISC complex subunit BRCC36
Length = 316
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 181
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 18/109 (16%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 215 PIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 262
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
H+ S + ++C + P + L+DRL++N+ L L E + L E
Sbjct: 263 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLRELQQEKEELMQE 311
>gi|344306236|ref|XP_003421794.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like isoform 1
[Loxodonta africana]
Length = 313
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 138 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 178
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 18/109 (16%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ ++ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 212 PIHIVPHVTIGRV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 259
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
H+ S + ++C + P + L+DRL++N+ L L E + L E
Sbjct: 260 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLQELQREKEELMQE 308
>gi|13236583|ref|NP_077308.1| lys-63-specific deubiquitinase BRCC36 isoform 1 [Homo sapiens]
gi|332260620|ref|XP_003279382.1| PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform 1
[Nomascus leucogenys]
gi|20532383|sp|P46736.2|BRCC3_HUMAN RecName: Full=Lys-63-specific deubiquitinase BRCC36; AltName:
Full=BRCA1-A complex subunit BRCC36; AltName:
Full=BRCA1/BRCA2-containing complex subunit 3; AltName:
Full=BRCA1/BRCA2-containing complex subunit 36; AltName:
Full=BRISC complex subunit BRCC36
gi|12804281|gb|AAH02999.1| BRCA1/BRCA2-containing complex, subunit 3 [Homo sapiens]
gi|16306828|gb|AAH06540.1| BRCA1/BRCA2-containing complex, subunit 3 [Homo sapiens]
gi|39753936|gb|AAR30498.1| BRCA1/BRCA2-containing complex subunit 36 [Homo sapiens]
gi|117644424|emb|CAL37707.1| hypothetical protein [synthetic construct]
gi|189069288|dbj|BAG36320.1| unnamed protein product [Homo sapiens]
gi|208967663|dbj|BAG72477.1| BRCA1/BRCA2-containing complex, subunit 3 [synthetic construct]
Length = 316
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 181
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 18/90 (20%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 215 PIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 262
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLK 251
H+ S + ++C + P + L+DRL+
Sbjct: 263 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 292
>gi|426398035|ref|XP_004065208.1| PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform 1 [Gorilla
gorilla gorilla]
Length = 316
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 181
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 18/90 (20%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 215 PIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 262
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLK 251
H+ S + ++C + P + L+DRL+
Sbjct: 263 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 292
>gi|197102731|ref|NP_001125907.1| lys-63-specific deubiquitinase BRCC36 [Pongo abelii]
gi|75041759|sp|Q5R9L6.1|BRCC3_PONAB RecName: Full=Lys-63-specific deubiquitinase BRCC36; AltName:
Full=BRCA1-A complex subunit BRCC36; AltName:
Full=BRCA1/BRCA2-containing complex subunit 3; AltName:
Full=BRCA1/BRCA2-containing complex subunit 36; AltName:
Full=BRISC complex subunit BRCC36
gi|55729630|emb|CAH91544.1| hypothetical protein [Pongo abelii]
Length = 247
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 181
>gi|332862045|ref|XP_003317841.1| PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform 1 [Pan
troglodytes]
gi|397477278|ref|XP_003810000.1| PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform 1 [Pan
paniscus]
gi|410214270|gb|JAA04354.1| BRCA1/BRCA2-containing complex, subunit 3 [Pan troglodytes]
gi|410255814|gb|JAA15874.1| BRCA1/BRCA2-containing complex, subunit 3 [Pan troglodytes]
gi|410355743|gb|JAA44475.1| BRCA1/BRCA2-containing complex, subunit 3 [Pan troglodytes]
Length = 316
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 181
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 18/90 (20%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 215 PIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 262
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLK 251
H+ S + ++C + P + L+DRL+
Sbjct: 263 HNGSVFTKNLCSQMSAISGPLLQWLEDRLE 292
>gi|156367201|ref|XP_001627307.1| predicted protein [Nematostella vectensis]
gi|156214213|gb|EDO35207.1| predicted protein [Nematostella vectensis]
Length = 267
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNH 41
MYQ++D GF+G+IFSCF+++ N G + + FQS D +N+
Sbjct: 112 MYQVMDEGFVGVIFSCFNDEPNHTGSLTITCFQSVDVNKNN 152
>gi|119593039|gb|EAW72633.1| BRCA1/BRCA2-containing complex, subunit 3, isoform CRA_b [Homo
sapiens]
Length = 316
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 181
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 18/90 (20%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 215 PIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 262
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLK 251
H+ S + ++C + P + L+DRL+
Sbjct: 263 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 292
>gi|440902925|gb|ELR53655.1| Lys-63-specific deubiquitinase BRCC36, partial [Bos grunniens
mutus]
Length = 312
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 137 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 177
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 18/109 (16%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 211 PIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 258
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
H+ S + ++C + P + L+DRL++N+ + L E + L E
Sbjct: 259 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHVQELQQEKEELLQE 307
>gi|359324110|ref|XP_855467.3| PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform 2 [Canis
lupus familiaris]
Length = 316
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 181
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 18/90 (20%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 215 PIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 262
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLK 251
H+ S + ++C + P + L+DRL+
Sbjct: 263 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 292
>gi|194228473|ref|XP_001498841.2| PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform 2 [Equus
caballus]
Length = 316
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 181
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 18/90 (20%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 215 PIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 262
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLK 251
H+ S + ++C + P + L+DRL+
Sbjct: 263 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 292
>gi|348552710|ref|XP_003462170.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Cavia
porcellus]
Length = 291
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 181
>gi|301789764|ref|XP_002930297.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like isoform 1
[Ailuropoda melanoleuca]
Length = 316
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 181
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 18/90 (20%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 215 PIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 262
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLK 251
H+ S + ++C + P + L+DRL+
Sbjct: 263 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 292
>gi|410989741|ref|XP_004001117.1| PREDICTED: lys-63-specific deubiquitinase BRCC36 [Felis catus]
Length = 487
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 312 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 352
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 18/90 (20%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 386 PIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 433
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLK 251
H+ S + ++C + P + L+DRL+
Sbjct: 434 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 463
>gi|229621689|sp|A5PJP6.1|BRCC3_BOVIN RecName: Full=Lys-63-specific deubiquitinase BRCC36; AltName:
Full=BRCA1-A complex subunit BRCC36; AltName:
Full=BRCA1/BRCA2-containing complex subunit 3; AltName:
Full=BRCA1/BRCA2-containing complex subunit 36; AltName:
Full=BRISC complex subunit BRCC36
gi|148743844|gb|AAI42194.1| BRCC3 protein [Bos taurus]
Length = 316
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 181
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 18/109 (16%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 215 PIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 262
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
H+ S + ++C + P + L+DRL++N+ + L E + L E
Sbjct: 263 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHVQELQQEKEELLQE 311
>gi|395861011|ref|XP_003802788.1| PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform 2
[Otolemur garnettii]
Length = 247
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 181
>gi|402911912|ref|XP_003918545.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Papio
anubis]
Length = 183
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 141 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 181
>gi|426258180|ref|XP_004022696.1| PREDICTED: lys-63-specific deubiquitinase BRCC36 [Ovis aries]
Length = 425
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 250 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 290
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 18/109 (16%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 324 PIHIVPHVTIGKVC--LESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 371
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
H+ S + ++C + P + L+DRL++N+ + L E + L E
Sbjct: 372 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHVQELQQEKEELLQE 420
>gi|403306980|ref|XP_003943993.1| PREDICTED: lys-63-specific deubiquitinase BRCC36 [Saimiri
boliviensis boliviensis]
Length = 300
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 125 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 165
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 18/109 (16%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 199 PIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 246
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
H+ S + ++C + P + L+DRL++N+ L L E + L E
Sbjct: 247 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLRELQQEKEELMQE 295
>gi|170649655|gb|ACB21242.1| BRCA1/BRCA2-containing complex, subunit 3 isoform 1 (predicted)
[Callicebus moloch]
Length = 279
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 104 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 144
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 18/90 (20%)
Query: 168 PLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY------I 221
P+H++P ++ K+ L S +L ++L +EE+ AY ++H LT+ I
Sbjct: 178 PIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLTHLDSVTKI 225
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLK 251
H+ S + ++C + P + L+DRL+
Sbjct: 226 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 255
>gi|194385186|dbj|BAG60999.1| unnamed protein product [Homo sapiens]
Length = 202
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 27 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 67
>gi|74149117|dbj|BAE22368.1| unnamed protein product [Mus musculus]
Length = 157
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 18/117 (15%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
+EY R EIP+H++P +++ + L S +L +L +EE+ AY ++H LT
Sbjct: 48 SEYERLEIPIHIVPRTTIGTV--CLRSAIELPGILCQEEQEAYR----------RIHGLT 95
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
+ IH+ S + +C + P + L+DRL++N+ RL L E + L E
Sbjct: 96 HLDSVTKIHNGSVFTKHLCSQMSAVCGPLLQWLEDRLEQNQQRLQELEQEKEDLMEE 152
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 1 MYQLLDTGFIGLIFSCFSEDA-NKVGRIQVIAFQSSDGKQN----HISKPIALLPVNKST 55
MYQ++D F+GLIF+CF ED K+GR+ FQS ++ + PI ++P
Sbjct: 7 MYQMMDQSFVGLIFACFIEDKPTKIGRVLYTCFQSVQASKSSEYERLEIPIHIVPRTTIG 66
Query: 56 VIDLESSL 63
+ L S++
Sbjct: 67 TVCLRSAI 74
>gi|302846983|ref|XP_002955027.1| hypothetical protein VOLCADRAFT_106618 [Volvox carteri f.
nagariensis]
gi|300259790|gb|EFJ44015.1| hypothetical protein VOLCADRAFT_106618 [Volvox carteri f.
nagariensis]
Length = 549
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 31/128 (24%)
Query: 163 VRKEIPLHVLPTSSLLKLDSPLTSFTDL---QRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
VRKE+ + V+P+ + L+ SF+DL Q++L EE + LT
Sbjct: 331 VRKEVRVSVVPSVTSLE-----RSFSDLLVVQKILLMEE-----------------NELT 368
Query: 220 YIHHTSTYQASMCKLIEYCLSPAISAL-----QDRLKENEIRLAMLTDEAKSLESEAFKG 274
+HH YQA + +L+E L PA+ ++ Q R +E ++R A L+D K+L F G
Sbjct: 369 EVHHAGVYQAHLVRLVETSLRPALVSVAALVAQQRAQEQQLR-AQLSDADKALLRFIFSG 427
Query: 275 SDSSLSSP 282
+ S S P
Sbjct: 428 NTSFWSKP 435
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSED-ANKVGRIQVIAFQS 34
MYQLLD GF+GLI S F+ D A++ +Q++ F S
Sbjct: 229 MYQLLDPGFVGLIVSTFNRDAASQTSTVQLLTFPS 263
>gi|443700432|gb|ELT99386.1| hypothetical protein CAPTEDRAFT_208045 [Capitella teleta]
Length = 275
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQS 34
MYQ+LD GFIGLIFS F++D ++ R+Q+ FQS
Sbjct: 120 MYQMLDEGFIGLIFSVFNQDKEQINRMQLTCFQS 153
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 159 GAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPL 218
+++R EIPL+V P L + + + S L ++L +EE AY + + D +
Sbjct: 162 APQHMRIEIPLYVTPCEGLSQPN--VQSLAQLPQILSQEEEEAYEKTRLSPDLDV----I 215
Query: 219 TYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
T IH+ S + ++I+ P + L++RLK NE ++ L + L E
Sbjct: 216 TQIHNGSVFVKRTGRIIQVMTGPLLQTLENRLKNNEGKVRDLAKQKAELLQE 267
>gi|7717235|gb|AAB30469.2| T-cell receptor alpha chain-c6.1A fusion protein [Homo sapiens]
Length = 363
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N K GR+ FQS +++
Sbjct: 97 MYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 137
>gi|320164460|gb|EFW41359.1| BRCA1/BRCA2-containing complex [Capsaspora owczarzaki ATCC 30864]
Length = 302
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Query: 2 YQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQ--------SSDGKQNHISKPIALLPVNK 53
YQ +D F+GLIFSCF + NK R+QVI FQ SS G +S+ + L V+
Sbjct: 146 YQQMDKNFVGLIFSCFHTEPNKANRLQVICFQAVPEPSYLSSTGSGKFVSREVPLQVVSP 205
Query: 54 STVIDLESSLSSSESLSA 71
+ L +S S S SL A
Sbjct: 206 N---GLTASFSDSLSLLA 220
>gi|427781461|gb|JAA56182.1| Putative lys-63-specific deubiquitinase brcc36 [Rhipicephalus
pulchellus]
Length = 284
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDA-NKVGRIQVIAFQSSDGKQN 40
+YQ++D GF+GLIFS FSEDA +K+ ++QV FQS + N
Sbjct: 111 IYQMMDEGFVGLIFSVFSEDATSKLNQVQVTCFQSVNQASN 151
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 162 YVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYI 221
YVR EIPLH++P++ + + + L + L +L +EE+ Y+ M G + LT +
Sbjct: 157 YVRMEIPLHIVPSTYISQ--ACLEALVRLPEILCQEEQDMYS---MTKQVPG-LDLLTRM 210
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSL 267
H+ + + ++C + E P + +L++RL++N ++ + E L
Sbjct: 211 HNNAVFVKALCNIAESVSGPLLQSLENRLRQNRDKIERMRVEKDEL 256
>gi|119605503|gb|EAW85097.1| hCG1980674, isoform CRA_a [Homo sapiens]
Length = 144
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GLIFSCF ED N + GR+ FQS +++
Sbjct: 27 MYQMMDQGFVGLIFSCFIEDKNTRAGRVLYTCFQSIQAQKS 67
>gi|351702980|gb|EHB05899.1| Lys-63-specific deubiquitinase BRCC36 [Heterocephalus glaber]
Length = 255
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 18/117 (15%)
Query: 160 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 219
Y R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H LT
Sbjct: 146 CRYERIEIPIHIVPHVTIGKV--CLESAVELPKILCQEEQDAYR----------RIHSLT 193
Query: 220 Y------IHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
+ IH+ S + ++C + P + L+DRL++N+ L L E + L E
Sbjct: 194 HLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLQDLQQEKEELLQE 250
>gi|159488008|ref|XP_001702014.1| predicted protein [Chlamydomonas reinhardtii]
gi|158271471|gb|EDO97289.1| predicted protein [Chlamydomonas reinhardtii]
Length = 292
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 163 VRKEIPLHVLPTSSLLKLDSPLTSFTDL---QRVLYEEERAAYNQAIMQNMSDGKVH--- 216
+RKE+ L V P ++ L+ SF+D+ QR+L EE Y +A+ ++
Sbjct: 163 IRKEVRLAVTPAATPLE-----RSFSDVLVVQRMLLMEENEVYKKALASALAASSRSSAV 217
Query: 217 --------PLTYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLE 268
L +HH YQA M +L++ L P+++AL+ + + + A LT E +LE
Sbjct: 218 GSGAFPTPELVEVHHAGVYQAHMARLVQTALHPSLAALEALVAQQRQQEAQLTAEVAALE 277
Query: 269 SEAFKGSDSSLSSPH 283
E ++ S H
Sbjct: 278 REVAAQVAAAASGRH 292
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSED-ANKVGRIQVIAFQS 34
MYQLLD GF+GLI S F+ D A + +Q+ AFQ+
Sbjct: 116 MYQLLDPGFVGLIVSAFNRDAATEAATVQLTAFQA 150
>gi|241566274|ref|XP_002402134.1| C6.1A, putative [Ixodes scapularis]
gi|215499994|gb|EEC09488.1| C6.1A, putative [Ixodes scapularis]
Length = 262
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 157 MSGAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVH 216
S A YVR EIPL+++P++ + ++ L + L ++L +EE + ++
Sbjct: 155 FSVARYVRAEIPLYIVPSTHIS--NACLEALVQLPQILCQEEEDMFGF----TKQVPRLD 208
Query: 217 PLTYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSL 267
LT +H+ S + ++C + E P + + ++RL++N+ R+ L E + L
Sbjct: 209 LLTKMHNGSVFVKALCNIAESVSGPLLQSFENRLRQNQDRIERLRLEKEEL 259
>gi|298710401|emb|CBJ25465.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 478
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 2 YQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSD 36
YQ +D FIGLIFS FSED + KVG I+V AFQ+ D
Sbjct: 92 YQSMDRRFIGLIFSVFSEDKHSKVGTIEVTAFQARD 127
>gi|156548284|ref|XP_001605872.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Nasonia
vitripennis]
Length = 252
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGR-IQVIAFQSSDGKQNHISKPIALLP---VNKS-T 55
MYQ +D F+GLIFS FSED + + + + + FQS +GK I I P VN S T
Sbjct: 112 MYQTMDPCFVGLIFSVFSEDKSTMEQEVLLTCFQSVNGKSKEIPLEIQCTPDISVNCSKT 171
Query: 56 VIDLESSLSSSES 68
+I+L L+ E+
Sbjct: 172 MIELPKILAQEEA 184
>gi|351712405|gb|EHB15324.1| Lys-63-specific deubiquitinase BRCC36 [Heterocephalus glaber]
Length = 201
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 159 GAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPL 218
+EY R EIP+H++P ++ K+ L S +L ++ +EE+ AY +H L
Sbjct: 91 SSEYERIEIPIHIVPHVTIGKV--CLESAVELPQIRCQEEQDAYR----------GIHSL 138
Query: 219 TY------IHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 270
T+ IH+ S + ++C + P + L+DRL++N+ L L E + L E
Sbjct: 139 THLDSVTKIHNGSVFTKNLCSQMSAVRGPLLQWLEDRLEQNQQHLQDLQQEKEELLQE 196
>gi|291240413|ref|XP_002740113.1| PREDICTED: BRCA1/BRCA2-containing complex, subunit 3-like
[Saccoglossus kowalevskii]
Length = 264
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 162 YVRKEIPLHVLPTSSLLKLDSP-LTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTY 220
Y R E+PL++ S+ P L + +L R+L +EE AY++ ++ D LT
Sbjct: 158 YERLEVPLYINAKDSM---SGPCLDALVELPRILTQEELHAYDKTLVSENKDL----LTQ 210
Query: 221 IHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRL 257
IH+ + Y S+ L+E +P + +L+ RL+ N++++
Sbjct: 211 IHNGAVYTKSLSHLMEVLSAPLLQSLESRLERNKMKM 247
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Query: 1 MYQ-LLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQS 34
MYQ +D GFIGLIFSCF+ D GRIQV FQ+
Sbjct: 111 MYQRYMDEGFIGLIFSCFNNDKQTNHGRIQVTCFQA 146
>gi|198435759|ref|XP_002126342.1| PREDICTED: similar to BRCA1/BRCA2-containing complex, subunit 3
[Ciona intestinalis]
Length = 274
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Query: 152 RSNLDMSGAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMS 211
R + + Y R EIP+ + +++ + + + T+L ++L +EE Y++A +
Sbjct: 150 RESPEWDAPRYQRIEIPMQIERGNTVSQFN--FQTLTNLPKILIQEESEMYDKAC-GSCG 206
Query: 212 DGKVHPLTYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESEA 271
DG +T IH+ S + S+C + E SP + L+ K++E+ L E LE+E
Sbjct: 207 DG---VMTQIHNASVHAQSLCNITETITSPLLHVLEATNKKHEMEL-----ERIKLENEE 258
Query: 272 FKGSDSSLSS 281
K ++LS+
Sbjct: 259 LKQQIAALST 268
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQS 34
MYQ++D F+GLIFSCF+E+ + I+ FQS
Sbjct: 115 MYQMMDQSFVGLIFSCFNENKANMQTIEATCFQS 148
>gi|328768798|gb|EGF78843.1| hypothetical protein BATDEDRAFT_35516 [Batrachochytrium
dendrobatidis JAM81]
Length = 779
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 3 QLLDTGFIGLIFSCFSEDANKVGRIQVIAFQ-------SSDGKQNHISKPIALLPVNKST 55
Q +D+ F GLI+SCF + + RIQV AFQ S DG Q I P+ + P
Sbjct: 112 QTMDSRFFGLIYSCFHTNQDLTQRIQVTAFQSISDESGSIDGIQ-QIKIPLTIPP----- 165
Query: 56 VIDLESSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSE 103
LE+ L S + +S LAE P + ++ + A G+TSE
Sbjct: 166 ---LENGLMSVDRMSK-----LAEIPSRLYDETCLAAEHTSHLGQTSE 205
>gi|346467949|gb|AEO33819.1| hypothetical protein [Amblyomma maculatum]
Length = 266
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 1 MYQLLDTGFIGLIFSCFSEDA-NKVGRIQVIAFQSSDGKQN 40
MYQ++D GF+GL FSEDA +K+ ++QV FQS + N
Sbjct: 116 MYQMMDDGFVGLXXXVFSEDATSKLNQVQVTCFQSVNQASN 156
>gi|221127568|ref|XP_002157002.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Hydra
magnipapillata]
Length = 258
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 12/82 (14%)
Query: 2 YQLLDTGFIGLIFSCFSE-DANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
YQL+D FIGLI SCF++ D +K+G ++V FQ+ + N + +++E
Sbjct: 112 YQLMDKDFIGLIVSCFNQSDQSKMGEVRVTCFQAVKFEGN-----------DSYERVEIE 160
Query: 61 SSLSSSESLSARSGNVLAENPE 82
+ S++ LS L + PE
Sbjct: 161 QEIVSTKELSHACLQELTKLPE 182
>gi|402911923|ref|XP_003918550.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Papio
anubis]
Length = 154
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 18/99 (18%)
Query: 159 GAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPL 218
G Y R EIP+H++P ++ K+ L S +L ++L +EE+ AY ++H L
Sbjct: 44 GHWYERIEIPIHIVPHVTIGKVC--LESAVELPKILCQEEQDAYR----------RIHSL 91
Query: 219 TY------IHHTSTYQASMCKLIEYCLSPAISALQDRLK 251
T+ IH+ S + ++C + P + L+DRL+
Sbjct: 92 THLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLE 130
>gi|328778884|ref|XP_624978.3| PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Apis
mellifera]
Length = 252
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 2 YQLLDTGFIGLIFSCFSE-DANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
YQ +D GF+GLIFS FSE +K I +I FQS + K I I P+ +T +
Sbjct: 114 YQTMDHGFVGLIFSVFSESKESKEQEISLICFQSHNEKLTEIPLEIVHTPIISNTCLKTM 173
Query: 61 SSL 63
++L
Sbjct: 174 TNL 176
>gi|340711841|ref|XP_003394477.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Bombus
terrestris]
Length = 251
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 14/107 (13%)
Query: 2 YQLLDTGFIGLIFSCFSE-DANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKS---TVI 57
YQ +D GF+GLIFS FSE K I +I FQS + K I I P++ + T+
Sbjct: 114 YQTMDHGFVGLIFSVFSESKETKEQEISLICFQSHNEKVIEIPLEIVHTPISNTCLKTMT 173
Query: 58 DLESSLSSSESLSARSGNVLAENPEQDTGDSKIVAGSWKGGGRTSEL 104
DL L E E E I+A + RT L
Sbjct: 174 DLLKLLVQEED----------EMAETFKDHQDILANIYNNAVRTRTL 210
>gi|260816942|ref|XP_002603346.1| hypothetical protein BRAFLDRAFT_277266 [Branchiostoma floridae]
gi|229288665|gb|EEN59357.1| hypothetical protein BRAFLDRAFT_277266 [Branchiostoma floridae]
Length = 268
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 162 YVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYI 221
Y R EIPLH+LP ++ + L S +L ++ +EE+ AY++ + + + T I
Sbjct: 157 YERIEIPLHILPNDTMSR--PCLESLVELPQIFSQEEQEAYSRTLGEGLDLT-----TCI 209
Query: 222 HHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAML 260
H+ + Y S+ L+E + L++R++ N+ ++ L
Sbjct: 210 HNGTVYMQSLSHLMEVLSGSLVQTLENRVQYNKNKVKRL 248
>gi|290999855|ref|XP_002682495.1| predicted protein [Naegleria gruberi]
gi|284096122|gb|EFC49751.1| predicted protein [Naegleria gruberi]
Length = 143
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 2 YQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQS 34
YQ +D+GF+GLIFS F+ D + G I++ AFQS
Sbjct: 111 YQQMDSGFVGLIFSVFNNDKSSTGSIKLYAFQS 143
>gi|380030135|ref|XP_003698711.1| PREDICTED: LOW QUALITY PROTEIN: lys-63-specific deubiquitinase
BRCC36-like [Apis florea]
Length = 252
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 2 YQLLDTGFIGLIFSCFSE-DANKVGRIQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLE 60
YQ +D GF+GLIFS FSE +K I +I FQS + K I I P+ +T +
Sbjct: 114 YQTMDHGFVGLIFSVFSESKESKEQEISLICFQSHNEKLTEIPLEIIHTPIISNTCLKTM 173
Query: 61 SSL 63
++L
Sbjct: 174 TNL 176
>gi|71743978|ref|XP_803455.1| Mov34/MPN/PAD-1 metallopeptidase [Trypanosoma brucei]
gi|70830784|gb|EAN76289.1| Mov34/MPN/PAD-1 metallopeptidase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 277
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 2 YQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISK----PIALLPVNKSTVI 57
YQ+L++G++GLIFS F D+ + + F++ G+ + + + PI+ +P+ VI
Sbjct: 138 YQMLESGWVGLIFSVFYCDSTQRNATSIHCFRTGPGETHEMVELEVVPISQMPLKSPPVI 197
Query: 58 DLESSL 63
D+ L
Sbjct: 198 DITYRL 203
>gi|261330979|emb|CBH13965.1| Mov34/MPN/PAD-1 metallopeptidase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 277
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 2 YQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISK----PIALLPVNKSTVI 57
YQ+L++G++GLIFS F D+ + + F++ G+ + + + PI+ +P+ VI
Sbjct: 138 YQMLESGWVGLIFSVFYCDSTQRNATSIHCFRTGPGETHEMVELEVVPISQMPLKSPPVI 197
Query: 58 DLESSL 63
D+ L
Sbjct: 198 DITYRL 203
>gi|407851248|gb|EKG05290.1| metallopeptidase, putative,metallo-peptidase, clan MP, family M67,
putative [Trypanosoma cruzi]
Length = 307
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 2 YQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPV 51
YQ +++G++GLIFS F DA + + FQ+ G + H IA++PV
Sbjct: 167 YQQMESGWVGLIFSVFYSDATNRNSVSIHCFQTGPG-ETHEKVEIAIVPV 215
>gi|383861186|ref|XP_003706067.1| PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Megachile
rotundata]
Length = 253
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 2 YQLLDTGFIGLIFSCFSE-DANKVGRIQVIAFQSSDGKQNHISKPIALLP----VNKSTV 56
YQ++D F+GLIFS FSE K I + FQS +G+ I I P + T+
Sbjct: 114 YQMMDNAFVGLIFSVFSESKETKEQEIALTCFQSHNGEATEIPLEIVYTPMISNICLKTM 173
Query: 57 IDLESSLSSSE 67
DL L E
Sbjct: 174 TDLLKILVQEE 184
>gi|242011246|ref|XP_002426366.1| COP9 signalosome complex subunit 5A, putative [Pediculus humanus
corporis]
gi|212510443|gb|EEB13628.1| COP9 signalosome complex subunit 5A, putative [Pediculus humanus
corporis]
Length = 268
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 2 YQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSS-DGKQ 39
YQ++D FIG+IFS F+ D K IQV FQ++ GK+
Sbjct: 111 YQMMDNRFIGVIFSVFNVDKTKGQEIQVTCFQAARQGKE 149
>gi|71386210|ref|XP_802146.1| metallopeptidase [Trypanosoma cruzi strain CL Brener]
gi|70854327|gb|EAN80700.1| metallopeptidase, putative [Trypanosoma cruzi]
Length = 273
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 2 YQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPV 51
YQ +++G++GLIFS F DA + + FQ+ G + H I ++PV
Sbjct: 133 YQQMESGWVGLIFSVFYSDATNRNSVSIHCFQTGPG-ETHEKVEIEIVPV 181
>gi|71406709|ref|XP_805871.1| metallopeptidase [Trypanosoma cruzi strain CL Brener]
gi|70869445|gb|EAN84020.1| metallopeptidase, putative [Trypanosoma cruzi]
Length = 303
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 2 YQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPV 51
YQ +++G++GLIFS F DA + + FQ+ G + H I ++PV
Sbjct: 163 YQQMESGWVGLIFSVFYSDATNRNGVSIHCFQTGPG-ETHEKVEIEIVPV 211
>gi|71413803|ref|XP_809027.1| metallopeptidase [Trypanosoma cruzi strain CL Brener]
gi|70873344|gb|EAN87176.1| metallopeptidase, putative [Trypanosoma cruzi]
Length = 305
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 2 YQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPV 51
YQ +++G++GLIFS F DA + + FQ+ G + H I ++PV
Sbjct: 165 YQQMESGWVGLIFSVFYSDATNRNGVSIHCFQTGPG-ETHEKVEIEIVPV 213
>gi|71400087|ref|XP_802945.1| metallopeptidase [Trypanosoma cruzi strain CL Brener]
gi|70865381|gb|EAN81499.1| metallopeptidase, putative [Trypanosoma cruzi]
Length = 307
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 2 YQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPV 51
YQ +++G++GLIFS F DA + + FQ+ G + H I ++PV
Sbjct: 167 YQQMESGWVGLIFSVFYSDATNRNGVSIHCFQTGPG-ETHEKVEIEIVPV 215
>gi|407412219|gb|EKF34051.1| metallopeptidase, putative,metallo-peptidase, clan MP, family M67,
putative [Trypanosoma cruzi marinkellei]
Length = 305
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 1 MYQLLDTGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHISKPIALLPV 51
+YQ +++G++GLIFS F D + + FQ+ G + H I ++PV
Sbjct: 164 LYQQMESGWVGLIFSVFYSDTTNRNNVSIHCFQTGPG-ETHEKVEIEIVPV 213
>gi|333374470|ref|ZP_08466313.1| shikimate dehydrogenase [Kingella kingae ATCC 23330]
gi|332975423|gb|EGK12315.1| shikimate dehydrogenase [Kingella kingae ATCC 23330]
Length = 272
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 17/139 (12%)
Query: 50 PVNKSTVIDLESSLSSSESLSARSGNVLAENPEQDTGDS--KIVAGSWKGGGRTSELGGF 107
PV S + ++ E + AEN QD GD A + +G T GF
Sbjct: 11 PVAHSKSPQIHQCFAAQEGVQIEYTRTFAENTAQDFGDGVRAFFAQNGRGANVTLPFKGF 70
Query: 108 FANVDANHPERARTGGNYQT----------GDLSNAIGDIDPMDMSESMQEAMHRSNLDM 157
++ H ERAR G T GD ++ G + D+ + +Q +H N+ +
Sbjct: 71 AYDLVQAHTERARAAGAVNTLIPQADGTLLGDNTDGEGLV--RDLCQHLQFNLHNKNILL 128
Query: 158 SGAEYVRKEIPLHVLPTSS 176
GA + + VLP ++
Sbjct: 129 LGAGGATRGV---VLPLAA 144
>gi|321456164|gb|EFX67279.1| hypothetical protein DAPPUDRAFT_229214 [Daphnia pulex]
Length = 264
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 12/130 (9%)
Query: 121 TGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEY----VRKEIPLHVLPTSS 176
T NYQ D + IG I + E+ ++ + S + + ++I ++++P +
Sbjct: 119 TQANYQAMD-PDFIGLIFSVFQQEANEKFANSSMICFQAVDVDGILSSRDIAVNIVPQNV 177
Query: 177 LLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKLIE 236
+ + L + T + L+ EE+ + + G ++ IH+TS + +MC+LIE
Sbjct: 178 PVIIGHCLKALTKIPLTLFNEEKE-----LKEKCYGGD--SISKIHNTSVFTRAMCQLIE 230
Query: 237 YCLSPAISAL 246
C P ISA+
Sbjct: 231 CCEMPCISAV 240
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 2 YQLLDTGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQNHISKPIA--LLPVNKSTVI 57
YQ +D FIGLIFS F ++AN K +I FQ+ D S+ IA ++P N +I
Sbjct: 123 YQAMDPDFIGLIFSVFQQEANEKFANSSMICFQAVDVDGILSSRDIAVNIVPQNVPVII 181
>gi|405760982|ref|YP_006701578.1| Thiol-activated cytolysin; Streptolysin O [Streptococcus pneumoniae
SPNA45]
gi|404277871|emb|CCM08432.1| Thiol-activated cytolysin; Streptolysin O [Streptococcus pneumoniae
SPNA45]
Length = 170
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 20 DANKVGRIQVIAFQSSDGKQ-NHISKPIALLPVNKSTVIDLESSLSSSESLSARSGNVLA 78
+A + ++V F +++G+ +SKP+ P++++ V D ++ S + AR
Sbjct: 23 NALSLAEVEVFCFIATNGETATQVSKPVQ--PISQTPVKDKTLTIQHSGAYIARYSITWE 80
Query: 79 ENPEQDTGDSKIVAGSWKGGGRTSELGGFFANVDANHPER-ARTGGNYQTGDLSN 132
E P G+ + + SW+G GR ++ GF N+ R R +TG L N
Sbjct: 81 EVPVDKDGNQVVRSHSWEGNGR-NQTAGFVLNLPIKENMRNLRVKIEKKTGLLWN 134
>gi|262166464|ref|ZP_06034201.1| type 4 fimbrial assembly ATPase PilB [Vibrio mimicus VM223]
gi|262026180|gb|EEY44848.1| type 4 fimbrial assembly ATPase PilB [Vibrio mimicus VM223]
Length = 562
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 121 TGGNYQTGDLSNAIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLKL 180
TG N TG S +G + M + + EA+ R + E + K + L S L KL
Sbjct: 488 TGCNECTGGYSGRVGIYEVMAFNTELAEAIMRRA-TIHQIESLAKTNGMQTLQESGLEKL 546
Query: 181 DSPLTSFTDLQRVLY 195
+TSF +LQRVLY
Sbjct: 547 REGITSFAELQRVLY 561
>gi|373118526|ref|ZP_09532652.1| hypothetical protein HMPREF0995_03488 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371666881|gb|EHO32018.1| hypothetical protein HMPREF0995_03488 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 384
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 15/160 (9%)
Query: 128 GDLSNAIGDIDPMDMSESMQ-----------EAMHRSNLDMSGAEYVRKEIPLHVLPTSS 176
L AIG+ +D++ + + E + NL S AEY R+ I LH +P
Sbjct: 50 AKLKQAIGEAGSLDVARAGKYTVAEWLRLWFEVYAKPNLRFSTAEYYRRGIELHTIPYIG 109
Query: 177 LLKLDSPLT-SFTDLQRVLYEE-ERAAYNQAIMQNMSDGKVHPLTYIHHTSTYQASMCKL 234
+KL+ T +L R L + R A ++ +S + + + H++ +A KL
Sbjct: 110 EVKLNQLTTRQIQNLYRELQQNGRRRAVQKSKRPGLSSSTIRGVHTMLHSALDRAVKEKL 169
Query: 235 IEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESEAFKG 274
+ + +PA + +L+ E+R D LE+ +G
Sbjct: 170 LLH--NPAEDCVVPKLQRQEMRTLKPEDMRAYLEAAERRG 207
>gi|339256534|ref|XP_003370358.1| hypothetical protein Tsp_13362 [Trichinella spiralis]
gi|316962944|gb|EFV48836.1| hypothetical protein Tsp_13362 [Trichinella spiralis]
Length = 167
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Query: 144 ESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLKLDSPLTSFTD-----LQRVLYEEE 198
ES R+++ S E +P+ ++P KL+ + S L + + EE
Sbjct: 36 ESFFPFTTRTSVPESSFENGHYSVPVMIVP-----KLEPAIDSILSERIGALTELCFAEE 90
Query: 199 RAAYNQAIMQ-NMSDG--KVHPLTYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEI 255
A+ +A+ N D +++ L Y H+ STY ++C I + P ++ L DR + +
Sbjct: 91 SDAFEKAVQSFNFDDNLQQLNTLAYSHNVSTYTTNVCSTIRGFVHPLLAYLTDRSRHSNY 150
Query: 256 RLA 258
L
Sbjct: 151 NLV 153
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.128 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,770,512,199
Number of Sequences: 23463169
Number of extensions: 192853877
Number of successful extensions: 445075
Number of sequences better than 100.0: 219
Number of HSP's better than 100.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 444623
Number of HSP's gapped (non-prelim): 358
length of query: 316
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 174
effective length of database: 9,027,425,369
effective search space: 1570772014206
effective search space used: 1570772014206
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 76 (33.9 bits)