Query 021221
Match_columns 316
No_of_seqs 428 out of 2387
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 14:30:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021221.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021221hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3idv_A Protein disulfide-isome 100.0 2.1E-28 7.2E-33 215.5 11.2 176 56-244 14-220 (241)
2 2ywm_A Glutaredoxin-like prote 99.9 1.6E-23 5.5E-28 183.4 13.1 154 79-239 18-198 (229)
3 1a8l_A Protein disulfide oxido 99.9 3.3E-23 1.1E-27 180.8 12.1 155 80-240 21-204 (226)
4 3apo_A DNAJ homolog subfamily 99.9 1.7E-23 6E-28 214.1 10.8 155 80-239 454-628 (780)
5 3uem_A Protein disulfide-isome 99.9 3.5E-23 1.2E-27 193.3 9.9 163 68-239 126-332 (361)
6 2hls_A Protein disulfide oxido 99.9 1.4E-22 4.7E-27 179.8 12.2 193 69-286 13-237 (243)
7 3zzx_A Thioredoxin; oxidoreduc 99.9 6.4E-22 2.2E-26 153.0 13.9 93 69-166 11-104 (105)
8 3apo_A DNAJ homolog subfamily 99.9 3.6E-22 1.2E-26 204.4 11.9 187 32-240 529-741 (780)
9 1sji_A Calsequestrin 2, calseq 99.9 2.1E-22 7.3E-27 187.6 7.6 165 56-238 10-199 (350)
10 3us3_A Calsequestrin-1; calciu 99.9 1.3E-21 4.3E-26 183.7 11.2 166 56-238 12-201 (367)
11 3h79_A Thioredoxin-like protei 99.9 5.1E-21 1.7E-25 152.2 12.8 105 56-166 14-126 (127)
12 3gnj_A Thioredoxin domain prot 99.8 1.6E-20 5.5E-25 145.0 13.2 106 57-168 4-110 (111)
13 2qsi_A Putative hydrogenase ex 99.8 1.1E-20 3.7E-25 151.9 12.0 104 59-168 17-123 (137)
14 2av4_A Thioredoxin-like protei 99.8 1.9E-20 6.6E-25 153.0 12.6 97 69-168 32-139 (160)
15 2trx_A Thioredoxin; electron t 99.8 6.7E-20 2.3E-24 140.9 14.5 105 58-168 3-108 (108)
16 2r2j_A Thioredoxin domain-cont 99.8 1.1E-20 3.7E-25 178.2 11.3 163 58-237 6-190 (382)
17 3tco_A Thioredoxin (TRXA-1); d 99.8 7.4E-20 2.5E-24 140.4 13.4 104 57-167 4-108 (109)
18 1w4v_A Thioredoxin, mitochondr 99.8 8.5E-20 2.9E-24 143.5 13.2 106 57-168 13-119 (119)
19 1t00_A Thioredoxin, TRX; redox 99.8 1.7E-19 5.7E-24 139.7 14.5 106 57-168 5-111 (112)
20 3die_A Thioredoxin, TRX; elect 99.8 1.7E-19 5.9E-24 137.8 14.0 102 58-167 4-106 (106)
21 2voc_A Thioredoxin; electron t 99.8 1.3E-19 4.3E-24 140.9 13.3 103 60-170 4-107 (112)
22 2dj1_A Protein disulfide-isome 99.8 1.3E-19 4.3E-24 146.1 13.7 109 56-172 16-128 (140)
23 2o8v_B Thioredoxin 1; disulfid 99.8 1.6E-19 5.3E-24 144.2 14.1 106 57-168 22-128 (128)
24 2dml_A Protein disulfide-isome 99.8 1.7E-19 5.9E-24 143.5 13.8 107 56-168 16-124 (130)
25 3p2a_A Thioredoxin 2, putative 99.8 2.5E-19 8.6E-24 146.1 15.1 107 56-169 37-144 (148)
26 1dby_A Chloroplast thioredoxin 99.8 1.9E-19 6.5E-24 138.1 13.5 103 59-167 3-106 (107)
27 1x5d_A Protein disulfide-isome 99.8 1.2E-19 4.1E-24 144.7 12.8 107 56-168 6-117 (133)
28 2i4a_A Thioredoxin; acidophIle 99.8 2.4E-19 8.2E-24 137.3 13.9 103 58-166 3-106 (107)
29 3qfa_C Thioredoxin; protein-pr 99.8 8.2E-20 2.8E-24 143.2 11.4 94 69-167 22-116 (116)
30 3hz4_A Thioredoxin; NYSGXRC, P 99.8 1.7E-19 5.6E-24 146.1 13.4 106 57-168 6-112 (140)
31 2qgv_A Hydrogenase-1 operon pr 99.8 2.9E-20 1E-24 149.9 8.6 103 60-169 20-126 (140)
32 1nsw_A Thioredoxin, TRX; therm 99.8 2.2E-19 7.4E-24 137.3 13.1 101 60-167 3-104 (105)
33 2ppt_A Thioredoxin-2; thiredox 99.8 2.2E-19 7.7E-24 148.2 14.1 104 61-169 49-153 (155)
34 1thx_A Thioredoxin, thioredoxi 99.8 3.4E-19 1.2E-23 138.2 14.2 105 58-168 8-113 (115)
35 3f3q_A Thioredoxin-1; His TAG, 99.8 3.9E-19 1.4E-23 137.6 14.4 95 66-167 14-109 (109)
36 2pu9_C TRX-F, thioredoxin F-ty 99.8 7.1E-19 2.4E-23 136.1 15.1 104 56-167 4-110 (111)
37 3f8u_A Protein disulfide-isome 99.8 1.3E-19 4.4E-24 175.5 13.1 162 59-236 3-183 (481)
38 1fb6_A Thioredoxin M; electron 99.8 6.2E-19 2.1E-23 134.5 13.9 102 60-167 3-105 (105)
39 2e0q_A Thioredoxin; electron t 99.8 5E-19 1.7E-23 134.3 13.1 100 61-168 3-103 (104)
40 3uvt_A Thioredoxin domain-cont 99.8 5.2E-19 1.8E-23 136.3 13.0 102 57-166 5-110 (111)
41 4euy_A Uncharacterized protein 99.8 1E-19 3.5E-24 139.7 8.7 88 79-167 16-104 (105)
42 3hxs_A Thioredoxin, TRXP; elec 99.8 4E-19 1.4E-23 143.4 12.5 89 80-168 50-139 (141)
43 2yzu_A Thioredoxin; redox prot 99.8 5.1E-19 1.8E-23 135.6 12.5 103 59-168 3-106 (109)
44 2i1u_A Thioredoxin, TRX, MPT46 99.8 6.2E-19 2.1E-23 138.2 12.4 107 56-168 11-118 (121)
45 1gh2_A Thioredoxin-like protei 99.8 1.2E-18 4.2E-23 133.9 13.6 95 69-168 12-107 (107)
46 3aps_A DNAJ homolog subfamily 99.8 4.1E-19 1.4E-23 139.7 11.0 105 58-168 4-113 (122)
47 3dxb_A Thioredoxin N-terminall 99.8 1.6E-18 5.5E-23 151.3 15.6 109 56-170 11-120 (222)
48 3m9j_A Thioredoxin; oxidoreduc 99.8 2.4E-18 8.2E-23 131.3 14.5 86 80-167 19-105 (105)
49 1oaz_A Thioredoxin 1; immune s 99.8 3.3E-19 1.1E-23 141.4 9.5 105 58-168 4-123 (123)
50 1mek_A Protein disulfide isome 99.8 2.5E-19 8.4E-24 139.8 8.6 107 56-169 6-118 (120)
51 2vlu_A Thioredoxin, thioredoxi 99.8 1.5E-18 5.3E-23 136.4 13.2 104 60-168 16-120 (122)
52 1x5e_A Thioredoxin domain cont 99.8 1.3E-18 4.3E-23 137.9 12.5 104 56-169 6-111 (126)
53 1syr_A Thioredoxin; SGPP, stru 99.8 1.4E-18 4.8E-23 134.9 12.4 99 62-167 12-111 (112)
54 1faa_A Thioredoxin F; electron 99.8 3.4E-18 1.2E-22 134.9 14.7 105 56-167 17-123 (124)
55 2l5l_A Thioredoxin; structural 99.8 2.4E-18 8.2E-23 138.5 14.0 90 80-170 37-128 (136)
56 3gix_A Thioredoxin-like protei 99.8 8.8E-19 3E-23 143.7 11.4 90 79-168 21-121 (149)
57 2djj_A PDI, protein disulfide- 99.8 5.4E-19 1.8E-23 138.7 9.6 104 56-168 6-117 (121)
58 3ul3_B Thioredoxin, thioredoxi 99.8 6.4E-19 2.2E-23 140.3 10.1 88 78-165 39-127 (128)
59 3ed3_A Protein disulfide-isome 99.8 1.6E-18 5.6E-23 158.1 13.8 109 56-170 16-144 (298)
60 3qou_A Protein YBBN; thioredox 99.8 1.7E-18 5.9E-23 156.4 13.7 106 58-168 8-114 (287)
61 1r26_A Thioredoxin; redox-acti 99.8 4E-18 1.4E-22 135.5 14.1 101 59-168 21-123 (125)
62 1ep7_A Thioredoxin CH1, H-type 99.8 4.1E-18 1.4E-22 131.6 13.6 87 81-168 24-111 (112)
63 2dj3_A Protein disulfide-isome 99.8 5E-19 1.7E-23 141.3 7.8 108 56-169 6-119 (133)
64 3ga4_A Dolichyl-diphosphooligo 99.8 3.6E-18 1.2E-22 143.5 13.1 106 61-170 20-155 (178)
65 3uem_A Protein disulfide-isome 99.8 4.8E-18 1.7E-22 158.4 15.2 131 30-168 215-357 (361)
66 2l6c_A Thioredoxin; oxidoreduc 99.8 2.2E-18 7.5E-23 133.6 10.7 90 79-169 17-107 (110)
67 1xwb_A Thioredoxin; dimerizati 99.8 1E-17 3.5E-22 127.8 14.3 86 80-166 19-105 (106)
68 3apq_A DNAJ homolog subfamily 99.8 2E-18 6.9E-23 149.3 11.5 108 56-170 96-204 (210)
69 1v98_A Thioredoxin; oxidoreduc 99.8 4.1E-18 1.4E-22 137.6 12.6 105 57-168 33-138 (140)
70 2oe3_A Thioredoxin-3; electron 99.8 3.4E-18 1.2E-22 133.6 11.6 85 79-165 28-113 (114)
71 2f51_A Thioredoxin; electron t 99.8 5.9E-18 2E-22 132.9 13.0 106 58-169 4-114 (118)
72 3d6i_A Monothiol glutaredoxin- 99.8 4.5E-18 1.5E-22 131.7 11.9 88 79-168 19-109 (112)
73 2xc2_A Thioredoxinn; oxidoredu 99.8 1.1E-17 3.8E-22 130.7 13.8 94 68-167 23-117 (117)
74 3f8u_A Protein disulfide-isome 99.8 8.9E-18 3.1E-22 162.5 16.1 134 30-170 317-463 (481)
75 1xfl_A Thioredoxin H1; AT3G510 99.8 1.2E-17 4E-22 132.5 13.8 107 56-167 15-123 (124)
76 1zma_A Bacterocin transport ac 99.8 8.3E-19 2.8E-23 137.4 6.6 99 59-164 14-117 (118)
77 2b5e_A Protein disulfide-isome 99.8 8.3E-18 2.8E-22 163.8 14.7 107 56-169 13-123 (504)
78 3evi_A Phosducin-like protein 99.7 1.1E-17 3.8E-22 131.8 12.3 98 59-166 5-112 (118)
79 3emx_A Thioredoxin; structural 99.7 3.1E-18 1.1E-22 137.8 9.3 85 83-169 33-127 (135)
80 2vim_A Thioredoxin, TRX; thior 99.7 3.2E-17 1.1E-21 124.6 14.5 86 80-167 18-104 (104)
81 3d22_A TRXH4, thioredoxin H-ty 99.7 1.2E-17 4.2E-22 134.4 12.8 111 56-170 23-134 (139)
82 2l57_A Uncharacterized protein 99.7 1.4E-17 4.9E-22 131.8 12.6 93 78-170 23-119 (126)
83 2dj0_A Thioredoxin-related tra 99.7 8.1E-19 2.8E-23 141.3 5.3 106 57-167 7-120 (137)
84 1qgv_A Spliceosomal protein U5 99.7 9.8E-18 3.3E-22 136.3 11.6 89 80-168 22-121 (142)
85 2wz9_A Glutaredoxin-3; protein 99.7 3.7E-17 1.3E-21 134.3 14.6 89 80-170 31-120 (153)
86 2j23_A Thioredoxin; immune pro 99.7 1.9E-17 6.4E-22 130.5 12.2 88 79-167 31-120 (121)
87 3q6o_A Sulfhydryl oxidase 1; p 99.7 1.8E-17 6.3E-22 146.4 13.1 108 56-170 11-129 (244)
88 3idv_A Protein disulfide-isome 99.7 1.3E-17 4.6E-22 146.1 12.0 127 32-170 109-239 (241)
89 3t58_A Sulfhydryl oxidase 1; o 99.7 1.1E-17 3.7E-22 163.3 12.3 109 56-170 11-129 (519)
90 1ti3_A Thioredoxin H, PTTRXH1; 99.7 5E-17 1.7E-21 125.5 12.4 97 69-168 15-112 (113)
91 3cxg_A Putative thioredoxin; m 99.7 4.1E-17 1.4E-21 130.9 11.9 86 80-168 39-129 (133)
92 2es7_A Q8ZP25_salty, putative 99.7 8.1E-18 2.8E-22 136.9 7.7 104 59-170 19-127 (142)
93 2vm1_A Thioredoxin, thioredoxi 99.7 9.1E-17 3.1E-21 125.0 12.4 98 69-169 17-115 (118)
94 2c0g_A ERP29 homolog, windbeut 99.7 1.6E-16 5.6E-21 140.7 15.2 142 56-219 15-173 (248)
95 2dbc_A PDCL2, unnamed protein 99.7 9.5E-17 3.2E-21 129.2 12.0 102 57-168 10-121 (135)
96 2b5e_A Protein disulfide-isome 99.7 7E-17 2.4E-21 157.3 13.1 132 31-170 326-469 (504)
97 3fk8_A Disulphide isomerase; A 99.7 5.1E-17 1.7E-21 129.8 9.4 98 69-167 18-132 (133)
98 2yj7_A LPBCA thioredoxin; oxid 99.5 1.4E-18 4.8E-23 132.3 0.0 101 60-166 4-105 (106)
99 1fo5_A Thioredoxin; disulfide 99.7 5.9E-17 2E-21 118.8 8.5 83 82-167 3-85 (85)
100 2kuc_A Putative disulphide-iso 99.7 8.5E-17 2.9E-21 127.8 9.8 103 67-170 14-123 (130)
101 1nho_A Probable thioredoxin; b 99.7 6.6E-17 2.2E-21 118.5 8.4 82 83-167 3-84 (85)
102 1a8l_A Protein disulfide oxido 99.7 2.1E-16 7.2E-21 137.5 12.3 89 79-167 131-225 (226)
103 2fwh_A Thiol:disulfide interch 99.7 1.2E-16 4E-21 128.2 9.2 88 80-168 30-128 (134)
104 2b5x_A YKUV protein, TRXY; thi 99.7 7.5E-16 2.6E-20 124.1 13.9 102 60-168 15-145 (148)
105 3kp8_A Vkorc1/thioredoxin doma 99.7 3.5E-17 1.2E-21 126.4 4.4 78 80-164 11-91 (106)
106 3lor_A Thiol-disulfide isomera 99.6 2E-15 6.9E-20 123.7 14.0 107 56-169 11-156 (160)
107 1wmj_A Thioredoxin H-type; str 99.6 6.9E-17 2.3E-21 128.1 4.3 98 69-169 25-123 (130)
108 1zzo_A RV1677; thioredoxin fol 99.6 1.7E-15 5.7E-20 120.1 12.1 105 56-168 7-135 (136)
109 2trc_P Phosducin, MEKA, PP33; 99.6 3E-16 1E-20 136.6 8.0 104 56-167 98-212 (217)
110 3dml_A Putative uncharacterize 99.6 6.2E-16 2.1E-20 120.8 8.5 86 80-168 17-110 (116)
111 1a0r_P Phosducin, MEKA, PP33; 99.6 6.5E-16 2.2E-20 136.7 9.6 105 56-168 111-226 (245)
112 1lu4_A Soluble secreted antige 99.6 1.7E-15 6E-20 120.3 11.2 102 57-167 7-135 (136)
113 3or5_A Thiol:disulfide interch 99.6 2.8E-15 9.6E-20 123.4 12.1 107 56-169 16-152 (165)
114 3f9u_A Putative exported cytoc 99.6 6.8E-16 2.3E-20 128.8 8.1 99 68-168 35-166 (172)
115 1wou_A Thioredoxin -related pr 99.6 1.1E-15 3.8E-20 120.7 8.7 85 80-165 23-122 (123)
116 3qcp_A QSOX from trypanosoma b 99.6 1.2E-16 4.1E-21 152.9 3.2 97 56-158 22-130 (470)
117 3eyt_A Uncharacterized protein 99.6 5.9E-15 2E-19 120.8 12.6 106 57-169 9-153 (158)
118 2l5o_A Putative thioredoxin; s 99.6 4.7E-15 1.6E-19 120.6 11.9 108 56-170 10-143 (153)
119 2f9s_A Thiol-disulfide oxidore 99.6 3.1E-15 1E-19 121.7 10.6 106 57-170 9-140 (151)
120 2qc7_A ERP31, ERP28, endoplasm 99.6 3.9E-15 1.3E-19 131.3 11.9 99 58-167 6-118 (240)
121 2ju5_A Thioredoxin disulfide i 99.6 3.5E-15 1.2E-19 122.7 10.5 97 69-168 36-152 (154)
122 2hls_A Protein disulfide oxido 99.6 4.8E-15 1.7E-19 131.1 12.0 87 80-169 137-227 (243)
123 2h30_A Thioredoxin, peptide me 99.6 2.8E-15 9.6E-20 123.4 9.6 104 58-168 22-156 (164)
124 4evm_A Thioredoxin family prot 99.6 6E-15 2.1E-19 116.7 11.0 103 57-166 5-137 (138)
125 2ywm_A Glutaredoxin-like prote 99.6 5.6E-15 1.9E-19 128.8 11.6 86 80-168 134-220 (229)
126 3ia1_A THIO-disulfide isomeras 99.6 3.8E-15 1.3E-19 121.4 9.7 105 56-169 13-145 (154)
127 3raz_A Thioredoxin-related pro 99.6 5.4E-15 1.9E-19 120.4 10.4 100 62-169 12-141 (151)
128 2lst_A Thioredoxin; structural 99.4 1E-16 3.5E-21 127.4 0.0 92 78-169 16-117 (130)
129 2lja_A Putative thiol-disulfid 99.6 6.8E-15 2.3E-19 119.5 9.8 105 58-170 14-145 (152)
130 2djk_A PDI, protein disulfide- 99.6 8.3E-15 2.8E-19 117.4 10.0 102 63-170 10-117 (133)
131 3hcz_A Possible thiol-disulfid 99.6 2.8E-15 9.5E-20 120.9 7.2 105 56-167 13-145 (148)
132 3gl3_A Putative thiol:disulfid 99.6 1.6E-14 5.5E-19 117.3 11.7 106 56-170 11-144 (152)
133 1ilo_A Conserved hypothetical 99.6 6.8E-15 2.3E-19 105.8 8.0 74 84-163 2-76 (77)
134 2b1k_A Thiol:disulfide interch 99.6 1.5E-14 5.3E-19 119.7 11.0 105 56-168 30-160 (168)
135 3fkf_A Thiol-disulfide oxidore 99.6 8E-15 2.7E-19 118.2 8.6 102 56-168 13-146 (148)
136 2lrn_A Thiol:disulfide interch 99.6 1.3E-14 4.5E-19 118.2 9.9 104 56-170 11-143 (152)
137 3ph9_A Anterior gradient prote 99.5 5.9E-15 2E-19 121.1 7.3 98 68-168 32-145 (151)
138 1kng_A Thiol:disulfide interch 99.5 1.7E-14 5.9E-19 117.5 10.1 96 65-168 33-152 (156)
139 3iv4_A Putative oxidoreductase 99.5 1.4E-14 4.9E-19 111.8 8.8 82 80-163 23-111 (112)
140 3erw_A Sporulation thiol-disul 99.5 3.2E-14 1.1E-18 114.0 11.2 84 80-164 33-145 (145)
141 3kcm_A Thioredoxin family prot 99.5 3E-14 1E-18 115.9 11.1 105 56-168 10-143 (154)
142 3hdc_A Thioredoxin family prot 99.5 3.1E-14 1E-18 116.9 11.1 106 56-169 23-153 (158)
143 3kh7_A Thiol:disulfide interch 99.5 2.8E-14 9.7E-19 119.7 11.0 104 56-168 38-167 (176)
144 3lwa_A Secreted thiol-disulfid 99.5 3.1E-14 1.1E-18 119.7 11.1 105 56-168 39-181 (183)
145 1sen_A Thioredoxin-like protei 99.5 2.3E-15 7.9E-20 125.2 3.9 98 69-168 35-148 (164)
146 3eur_A Uncharacterized protein 99.5 1.9E-14 6.4E-19 115.9 8.9 99 56-165 13-142 (142)
147 3ewl_A Uncharacterized conserv 99.5 1.8E-14 6.3E-19 115.7 8.1 102 56-168 9-141 (142)
148 1z6n_A Hypothetical protein PA 99.5 3.4E-14 1.2E-18 118.5 9.5 83 80-165 53-140 (167)
149 2lrt_A Uncharacterized protein 99.5 3.9E-14 1.3E-18 115.8 9.2 101 56-164 17-144 (152)
150 3ha9_A Uncharacterized thiored 99.5 6.3E-14 2.2E-18 115.6 9.8 103 56-168 19-164 (165)
151 2ywi_A Hypothetical conserved 99.5 1.6E-13 5.3E-18 116.5 10.9 107 56-169 26-175 (196)
152 2cvb_A Probable thiol-disulfid 99.5 1.9E-13 6.5E-18 115.3 10.8 108 56-170 15-161 (188)
153 1jfu_A Thiol:disulfide interch 99.5 4.3E-13 1.5E-17 112.8 13.0 105 56-168 42-180 (186)
154 3fw2_A Thiol-disulfide oxidore 99.5 2.1E-13 7.3E-18 110.7 10.4 101 56-167 13-147 (150)
155 2hyx_A Protein DIPZ; thioredox 99.5 1.5E-13 5.2E-18 127.7 10.5 103 59-168 67-199 (352)
156 2fgx_A Putative thioredoxin; N 99.5 2E-13 6.7E-18 105.2 8.5 77 82-163 29-106 (107)
157 3ira_A Conserved protein; meth 99.4 1.2E-13 4E-18 115.7 6.3 72 78-149 36-120 (173)
158 1ttz_A Conserved hypothetical 99.4 2.2E-13 7.6E-18 101.1 6.7 75 85-168 3-77 (87)
159 4fo5_A Thioredoxin-like protei 99.4 3.8E-13 1.3E-17 108.3 8.4 98 56-165 15-142 (143)
160 3u5r_E Uncharacterized protein 99.4 1.2E-12 4.1E-17 113.6 11.1 106 56-170 40-189 (218)
161 3kp9_A Vkorc1/thioredoxin doma 99.4 9.9E-14 3.4E-18 125.2 4.1 74 84-164 200-276 (291)
162 1i5g_A Tryparedoxin II; electr 99.4 7.7E-13 2.6E-17 106.5 8.0 79 57-143 11-116 (144)
163 3s9f_A Tryparedoxin; thioredox 99.4 6.7E-13 2.3E-17 110.1 7.7 76 59-143 34-136 (165)
164 2ggt_A SCO1 protein homolog, m 99.4 1.5E-12 5.2E-17 106.8 9.7 105 56-168 5-161 (164)
165 2rli_A SCO2 protein homolog, m 99.4 2.2E-12 7.4E-17 106.7 10.4 105 56-168 8-164 (171)
166 3cmi_A Peroxiredoxin HYR1; thi 99.4 6.5E-13 2.2E-17 110.5 6.9 104 57-168 15-168 (171)
167 3drn_A Peroxiredoxin, bacterio 99.4 2.8E-12 9.7E-17 105.6 10.4 103 56-166 10-147 (161)
168 1o73_A Tryparedoxin; electron 99.4 1E-12 3.5E-17 105.6 7.3 77 58-143 13-116 (144)
169 1o8x_A Tryparedoxin, TRYX, TXN 99.3 1.4E-12 5E-17 105.2 7.7 77 58-143 13-116 (146)
170 2ls5_A Uncharacterized protein 99.0 1.1E-13 3.8E-18 113.4 0.0 103 57-168 16-148 (159)
171 2vup_A Glutathione peroxidase- 99.3 4E-12 1.4E-16 107.7 9.3 105 56-168 30-185 (190)
172 2p5q_A Glutathione peroxidase 99.3 1E-12 3.6E-17 108.5 5.1 105 56-168 14-168 (170)
173 2p31_A CL683, glutathione pero 99.3 8.3E-13 2.8E-17 111.1 4.5 104 56-167 31-180 (181)
174 2e7p_A Glutaredoxin; thioredox 99.3 9.6E-13 3.3E-17 102.2 4.5 80 81-166 19-106 (116)
175 2v1m_A Glutathione peroxidase; 99.3 4.3E-12 1.5E-16 104.6 8.7 105 56-168 13-167 (169)
176 3dwv_A Glutathione peroxidase- 99.3 1.6E-12 5.4E-17 110.0 6.2 106 56-168 28-183 (187)
177 2lus_A Thioredoxion; CR-Trp16, 98.9 3E-13 1E-17 108.4 0.0 88 58-153 8-127 (143)
178 2k6v_A Putative cytochrome C o 99.3 4.5E-12 1.5E-16 104.8 7.0 102 56-166 18-171 (172)
179 1xvw_A Hypothetical protein RV 99.3 1.5E-11 5E-16 100.8 9.7 103 56-165 17-157 (160)
180 2dlx_A UBX domain-containing p 99.3 7.4E-12 2.5E-16 102.7 7.9 99 68-168 30-136 (153)
181 1we0_A Alkyl hydroperoxide red 99.3 9.1E-12 3.1E-16 105.1 8.4 106 56-168 9-157 (187)
182 3kij_A Probable glutathione pe 99.3 5.5E-12 1.9E-16 105.9 6.7 105 56-168 20-170 (180)
183 2bmx_A Alkyl hydroperoxidase C 99.2 1.4E-11 4.6E-16 104.8 8.3 97 65-168 36-170 (195)
184 2jsy_A Probable thiol peroxida 99.2 5.8E-11 2E-15 98.0 11.9 105 56-167 26-166 (167)
185 2f8a_A Glutathione peroxidase 99.2 8.4E-12 2.9E-16 107.6 6.9 104 57-168 29-207 (208)
186 2obi_A PHGPX, GPX-4, phospholi 99.2 1.3E-11 4.3E-16 103.8 7.6 103 56-166 29-182 (183)
187 1wjk_A C330018D20RIK protein; 99.2 2.5E-11 8.4E-16 92.3 7.3 81 80-168 14-96 (100)
188 1qmv_A Human thioredoxin perox 99.2 5.9E-11 2E-15 101.0 10.3 105 56-167 13-162 (197)
189 1zof_A Alkyl hydroperoxide-red 99.2 2E-11 7E-16 103.9 7.2 106 56-167 9-160 (198)
190 2gs3_A PHGPX, GPX-4, phospholi 99.2 2.4E-11 8.3E-16 102.4 7.2 103 56-166 31-184 (185)
191 1hyu_A AHPF, alkyl hydroperoxi 99.2 8.4E-11 2.9E-15 114.9 12.1 83 80-166 116-198 (521)
192 4f9z_D Endoplasmic reticulum r 99.2 2.7E-11 9.2E-16 105.7 6.3 147 79-238 25-199 (227)
193 2k8s_A Thioredoxin; dimer, str 99.2 2.4E-11 8.3E-16 88.2 4.6 73 84-159 3-77 (80)
194 1uul_A Tryparedoxin peroxidase 99.1 1.4E-10 4.6E-15 99.2 9.6 105 56-167 14-164 (202)
195 1ego_A Glutaredoxin; electron 99.1 7.7E-11 2.6E-15 86.1 6.1 75 85-167 3-83 (85)
196 1xzo_A BSSCO, hypothetical pro 99.1 1.3E-10 4.3E-15 96.3 7.9 105 56-168 15-172 (174)
197 2b7k_A SCO1 protein; metalloch 99.1 1.2E-10 4.2E-15 99.4 7.8 105 56-168 23-179 (200)
198 1xvq_A Thiol peroxidase; thior 99.1 1.7E-10 5.6E-15 96.4 8.0 105 56-168 26-168 (175)
199 1nm3_A Protein HI0572; hybrid, 99.1 8.3E-10 2.8E-14 96.9 12.7 132 56-215 11-193 (241)
200 1zye_A Thioredoxin-dependent p 99.1 2.7E-10 9.1E-15 98.9 9.4 98 64-168 46-185 (220)
201 2h01_A 2-Cys peroxiredoxin; th 99.1 3.2E-10 1.1E-14 95.9 8.9 106 56-167 8-158 (192)
202 3ztl_A Thioredoxin peroxidase; 99.1 4.3E-10 1.5E-14 97.7 9.9 104 56-166 48-196 (222)
203 2i81_A 2-Cys peroxiredoxin; st 99.1 5.5E-10 1.9E-14 96.5 10.4 106 56-167 29-179 (213)
204 3gkn_A Bacterioferritin comigr 99.1 4E-10 1.4E-14 92.4 8.4 101 59-166 20-160 (163)
205 3gyk_A 27KDA outer membrane pr 99.0 8.8E-10 3E-14 91.7 9.3 83 80-167 21-172 (175)
206 1eej_A Thiol:disulfide interch 99.0 2.3E-10 7.7E-15 99.1 5.8 83 80-167 85-210 (216)
207 2i3y_A Epididymal secretory gl 99.0 4.9E-10 1.7E-14 97.0 7.6 105 56-168 37-211 (215)
208 2a4v_A Peroxiredoxin DOT5; yea 99.0 1.7E-09 5.7E-14 88.5 10.2 96 56-156 15-139 (159)
209 4g2e_A Peroxiredoxin; redox pr 99.0 3.2E-10 1.1E-14 93.1 4.6 104 56-166 12-156 (157)
210 1psq_A Probable thiol peroxida 98.9 2.9E-09 9.9E-14 87.6 9.6 103 56-165 24-162 (163)
211 1n8j_A AHPC, alkyl hydroperoxi 98.9 5.5E-09 1.9E-13 88.1 10.8 106 56-168 9-156 (186)
212 2r37_A Glutathione peroxidase 98.9 1.3E-09 4.3E-14 93.9 6.7 104 57-168 20-193 (207)
213 2c0d_A Thioredoxin peroxidase 98.9 5.3E-09 1.8E-13 90.9 9.9 106 56-167 33-183 (221)
214 2yzh_A Probable thiol peroxida 98.9 3.1E-09 1E-13 88.1 7.9 102 57-166 30-170 (171)
215 4gqc_A Thiol peroxidase, perox 98.9 6E-10 2.1E-14 92.2 3.6 108 56-168 13-160 (164)
216 3p7x_A Probable thiol peroxida 98.9 3.2E-09 1.1E-13 87.6 7.8 102 56-165 28-165 (166)
217 2pn8_A Peroxiredoxin-4; thiore 98.9 7.6E-09 2.6E-13 89.1 10.3 97 64-167 38-176 (211)
218 1t3b_A Thiol:disulfide interch 98.9 2.1E-09 7.1E-14 92.7 6.7 82 80-166 85-209 (211)
219 3me7_A Putative uncharacterize 98.9 4.4E-09 1.5E-13 87.3 7.9 105 58-169 12-163 (170)
220 1q98_A Thiol peroxidase, TPX; 98.8 4.9E-09 1.7E-13 86.5 7.5 90 56-152 25-148 (165)
221 3ixr_A Bacterioferritin comigr 98.8 7.6E-09 2.6E-13 86.6 8.1 104 56-166 33-176 (179)
222 3h93_A Thiol:disulfide interch 98.8 1.2E-08 4.1E-13 86.1 8.6 88 80-168 24-184 (192)
223 1kte_A Thioltransferase; redox 98.8 3.7E-09 1.3E-13 80.4 4.1 78 84-165 13-100 (105)
224 3zrd_A Thiol peroxidase; oxido 98.8 2E-08 6.8E-13 85.7 9.0 90 56-152 60-183 (200)
225 1h75_A Glutaredoxin-like prote 98.8 5.8E-09 2E-13 75.3 4.6 71 85-166 3-76 (81)
226 3qpm_A Peroxiredoxin; oxidored 98.7 4.7E-08 1.6E-12 85.9 10.8 97 64-167 67-205 (240)
227 3hd5_A Thiol:disulfide interch 98.7 4.4E-08 1.5E-12 82.8 9.5 34 80-113 24-57 (195)
228 1r7h_A NRDH-redoxin; thioredox 98.7 4.9E-08 1.7E-12 69.0 8.1 69 85-164 3-74 (75)
229 3a2v_A Probable peroxiredoxin; 98.7 3.5E-08 1.2E-12 87.1 8.4 103 59-167 16-161 (249)
230 1tp9_A Peroxiredoxin, PRX D (t 98.7 7.4E-08 2.5E-12 79.1 9.9 85 62-153 20-146 (162)
231 3uma_A Hypothetical peroxiredo 98.7 1.2E-07 4E-12 80.0 11.2 91 56-153 34-167 (184)
232 2wfc_A Peroxiredoxin 5, PRDX5; 98.7 1.1E-07 3.6E-12 78.8 10.3 91 57-153 12-142 (167)
233 3tjj_A Peroxiredoxin-4; thiore 98.7 6.1E-08 2.1E-12 85.9 9.1 98 63-167 80-219 (254)
234 1v58_A Thiol:disulfide interch 98.7 3.7E-08 1.3E-12 86.6 7.6 86 80-167 96-232 (241)
235 4f9z_D Endoplasmic reticulum r 98.7 3.3E-07 1.1E-11 79.5 13.5 103 63-169 117-226 (227)
236 2hze_A Glutaredoxin-1; thiored 98.6 6.7E-09 2.3E-13 80.5 1.8 79 83-165 19-107 (114)
237 3mng_A Peroxiredoxin-5, mitoch 98.6 9.8E-08 3.4E-12 79.6 8.9 103 56-164 23-171 (173)
238 4hde_A SCO1/SENC family lipopr 98.6 1E-07 3.5E-12 79.1 8.6 105 56-167 14-169 (170)
239 1sji_A Calsequestrin 2, calseq 98.6 3.9E-07 1.3E-11 84.2 11.6 128 80-220 141-275 (350)
240 1prx_A HORF6; peroxiredoxin, h 98.5 4.5E-07 1.5E-11 78.8 10.9 104 56-167 13-168 (224)
241 3hz8_A Thiol:disulfide interch 98.5 5.5E-07 1.9E-11 76.2 11.0 33 80-112 23-55 (193)
242 2v2g_A Peroxiredoxin 6; oxidor 98.5 6.2E-07 2.1E-11 78.4 10.9 105 56-167 11-164 (233)
243 4dvc_A Thiol:disulfide interch 98.5 7.8E-07 2.7E-11 73.8 10.9 88 80-168 20-182 (184)
244 2pwj_A Mitochondrial peroxired 98.5 5.6E-07 1.9E-11 74.6 9.3 50 65-119 33-86 (171)
245 2cq9_A GLRX2 protein, glutared 98.5 8.6E-08 2.9E-12 76.1 3.8 75 85-166 29-113 (130)
246 3keb_A Probable thiol peroxida 98.4 9E-07 3.1E-11 76.7 9.7 103 56-168 30-176 (224)
247 3zzx_A Thioredoxin; oxidoreduc 98.4 1.5E-08 5.2E-13 77.4 -1.5 51 187-242 22-87 (105)
248 3l9v_A Putative thiol-disulfid 98.4 5.3E-07 1.8E-11 76.1 7.9 36 81-116 14-52 (189)
249 2ht9_A Glutaredoxin-2; thiored 98.4 1.2E-07 4.2E-12 76.8 3.1 77 85-165 51-134 (146)
250 1xcc_A 1-Cys peroxiredoxin; un 98.4 1.1E-06 3.7E-11 76.1 8.9 97 63-167 20-165 (220)
251 3feu_A Putative lipoprotein; a 98.4 1.1E-06 3.7E-11 73.9 8.5 86 81-168 22-184 (185)
252 2znm_A Thiol:disulfide interch 98.4 1.5E-06 5.2E-11 73.1 9.4 86 80-168 21-180 (195)
253 3ic4_A Glutaredoxin (GRX-1); s 98.3 7E-07 2.4E-11 65.8 6.1 73 84-164 13-91 (92)
254 2l4c_A Endoplasmic reticulum r 98.3 5.4E-06 1.8E-10 65.1 11.4 80 79-166 37-122 (124)
255 2rem_A Disulfide oxidoreductas 98.3 4.8E-06 1.6E-10 69.8 11.1 34 80-113 24-57 (193)
256 2klx_A Glutaredoxin; thioredox 98.3 9.4E-07 3.2E-11 64.8 5.8 68 84-164 7-77 (89)
257 1z6m_A Conserved hypothetical 98.3 2.4E-06 8.1E-11 70.7 8.8 81 80-164 26-174 (175)
258 3c1r_A Glutaredoxin-1; oxidize 98.3 6.8E-07 2.3E-11 69.6 5.1 59 85-147 27-93 (118)
259 3gv1_A Disulfide interchange p 98.3 1.7E-06 5.7E-11 70.2 7.4 83 79-168 12-139 (147)
260 1un2_A DSBA, thiol-disulfide i 98.3 4.1E-07 1.4E-11 77.4 3.4 44 80-123 112-158 (197)
261 3us3_A Calsequestrin-1; calciu 98.2 3.6E-06 1.2E-10 78.3 9.0 130 80-221 143-278 (367)
262 3nzn_A Glutaredoxin; structura 98.2 7.1E-07 2.4E-11 67.6 3.2 75 82-163 21-101 (103)
263 1fov_A Glutaredoxin 3, GRX3; a 98.2 4.3E-06 1.5E-10 59.8 7.1 68 85-165 3-74 (82)
264 3qmx_A Glutaredoxin A, glutare 98.2 6.9E-06 2.3E-10 61.8 8.3 61 80-147 13-78 (99)
265 2h8l_A Protein disulfide-isome 98.2 1.8E-05 6.1E-10 69.6 12.2 130 79-221 22-164 (252)
266 3h79_A Thioredoxin-like protei 98.2 1.5E-07 5.2E-12 73.7 -1.2 51 185-240 33-104 (127)
267 2lqo_A Putative glutaredoxin R 98.1 6.2E-06 2.1E-10 61.3 7.4 76 84-169 5-85 (92)
268 2yan_A Glutaredoxin-3; oxidore 98.1 6.2E-06 2.1E-10 62.5 7.2 57 83-147 18-83 (105)
269 3rhb_A ATGRXC5, glutaredoxin-C 98.1 1.1E-06 3.7E-11 67.6 2.9 72 69-147 8-84 (113)
270 3l9s_A Thiol:disulfide interch 98.1 6.7E-06 2.3E-10 69.4 7.8 34 80-113 20-56 (191)
271 4eo3_A Bacterioferritin comigr 98.1 9E-06 3.1E-10 74.4 8.9 104 56-168 6-139 (322)
272 3msz_A Glutaredoxin 1; alpha-b 98.1 4.7E-06 1.6E-10 60.6 5.6 74 84-168 5-87 (89)
273 2ec4_A FAS-associated factor 1 98.0 5.4E-05 1.8E-09 63.2 11.8 127 30-168 11-168 (178)
274 2khp_A Glutaredoxin; thioredox 98.0 1.1E-05 3.9E-10 59.2 6.1 56 84-146 7-66 (92)
275 1hyu_A AHPF, alkyl hydroperoxi 98.0 2.2E-05 7.4E-10 76.4 9.8 150 73-240 10-180 (521)
276 2av4_A Thioredoxin-like protei 98.0 4.8E-07 1.6E-11 73.8 -1.7 51 186-241 42-108 (160)
277 2qsi_A Putative hydrogenase ex 97.9 1.6E-06 5.3E-11 69.3 0.6 67 172-245 22-106 (137)
278 3f3q_A Thioredoxin-1; His TAG, 97.9 7E-07 2.4E-11 68.0 -2.2 53 184-241 23-90 (109)
279 4euy_A Uncharacterized protein 97.9 1.2E-06 3.9E-11 66.1 -1.3 53 184-241 17-84 (105)
280 2dj1_A Protein disulfide-isome 97.8 1.3E-06 4.4E-11 69.2 -1.5 50 186-240 35-103 (140)
281 1gh2_A Thioredoxin-like protei 97.8 1.1E-06 3.9E-11 66.2 -1.7 51 186-241 22-87 (107)
282 3hz4_A Thioredoxin; NYSGXRC, P 97.8 3E-06 1E-10 67.5 0.6 52 185-241 24-91 (140)
283 2l5l_A Thioredoxin; structural 97.8 2.7E-06 9.1E-11 67.4 -0.1 52 185-241 38-106 (136)
284 3hxs_A Thioredoxin, TRXP; elec 97.8 2.3E-06 8E-11 67.8 -0.6 54 185-243 51-121 (141)
285 2dml_A Protein disulfide-isome 97.8 5.4E-06 1.8E-10 64.7 1.3 50 185-239 35-100 (130)
286 3ga4_A Dolichyl-diphosphooligo 97.8 2.6E-06 8.9E-11 71.2 -0.5 64 172-239 25-114 (178)
287 3gnj_A Thioredoxin domain prot 97.8 2.6E-06 8.7E-11 64.4 -0.6 51 186-241 23-89 (111)
288 3qfa_C Thioredoxin; protein-pr 97.8 8.1E-07 2.8E-11 68.5 -3.5 51 186-241 32-97 (116)
289 1zma_A Bacterocin transport ac 97.8 3.4E-06 1.2E-10 64.9 -0.2 52 185-241 29-100 (118)
290 3evi_A Phosducin-like protein 97.7 1.2E-06 4.1E-11 68.3 -2.9 52 187-243 25-88 (118)
291 3sbc_A Peroxiredoxin TSA1; alp 97.7 0.00013 4.3E-09 62.7 9.4 96 64-166 42-179 (216)
292 3p2a_A Thioredoxin 2, putative 97.7 3.2E-06 1.1E-10 67.8 -0.7 52 185-241 55-122 (148)
293 1x5e_A Thioredoxin domain cont 97.7 2.4E-06 8.3E-11 66.4 -1.6 48 188-240 25-89 (126)
294 2qgv_A Hydrogenase-1 operon pr 97.7 4.1E-06 1.4E-10 67.1 -0.4 54 185-243 34-106 (140)
295 3qou_A Protein YBBN; thioredox 97.7 7.3E-06 2.5E-10 73.1 0.9 52 185-241 26-93 (287)
296 3gix_A Thioredoxin-like protei 97.7 3.2E-06 1.1E-10 68.4 -1.7 51 186-241 24-90 (149)
297 3d6i_A Monothiol glutaredoxin- 97.7 5E-06 1.7E-10 63.1 -0.6 51 186-241 22-89 (112)
298 3ctg_A Glutaredoxin-2; reduced 97.7 9E-06 3.1E-10 64.3 0.8 59 85-147 39-105 (129)
299 1un2_A DSBA, thiol-disulfide i 97.7 1.8E-05 6.3E-10 67.1 2.8 88 125-220 40-146 (197)
300 1x5d_A Protein disulfide-isome 97.6 5.7E-06 1.9E-10 64.6 -0.6 50 185-239 25-94 (133)
301 2ppt_A Thioredoxin-2; thiredox 97.6 6.1E-06 2.1E-10 67.1 -0.7 50 186-240 65-130 (155)
302 3gha_A Disulfide bond formatio 97.6 0.00043 1.5E-08 58.7 10.9 39 126-168 154-192 (202)
303 3bj5_A Protein disulfide-isome 97.6 0.001 3.5E-08 53.5 12.4 93 79-171 29-130 (147)
304 1r26_A Thioredoxin; redox-acti 97.6 6.3E-06 2.2E-10 64.5 -1.1 51 186-241 38-103 (125)
305 3m9j_A Thioredoxin; oxidoreduc 97.6 5.5E-06 1.9E-10 61.8 -1.5 50 187-241 22-86 (105)
306 3tco_A Thioredoxin (TRXA-1); d 97.6 3.7E-06 1.3E-10 63.1 -2.7 52 185-241 21-88 (109)
307 2c0g_A ERP29 homolog, windbeut 97.6 6.2E-06 2.1E-10 72.6 -1.6 45 185-239 33-105 (248)
308 3ul3_B Thioredoxin, thioredoxi 97.5 1.3E-05 4.6E-10 62.5 0.4 51 185-240 42-108 (128)
309 2voc_A Thioredoxin; electron t 97.5 1.8E-05 6.2E-10 60.1 1.1 50 186-240 18-83 (112)
310 2dj0_A Thioredoxin-related tra 97.5 2.8E-05 9.7E-10 61.4 2.3 64 187-255 28-115 (137)
311 2wz9_A Glutaredoxin-3; protein 97.5 6.5E-06 2.2E-10 66.6 -1.6 51 186-241 33-98 (153)
312 3die_A Thioredoxin, TRX; elect 97.5 1.2E-05 4.2E-10 59.9 -0.1 51 185-240 19-85 (106)
313 1ep7_A Thioredoxin CH1, H-type 97.5 1E-05 3.4E-10 61.2 -0.7 50 187-241 26-91 (112)
314 3f4s_A Alpha-DSBA1, putative u 97.5 0.0006 2.1E-08 58.9 10.5 43 126-168 161-211 (226)
315 2pu9_C TRX-F, thioredoxin F-ty 97.5 9E-06 3.1E-10 61.6 -1.0 51 186-241 25-91 (111)
316 2l6c_A Thioredoxin; oxidoreduc 97.5 7.9E-06 2.7E-10 62.1 -1.9 51 186-241 20-85 (110)
317 1v98_A Thioredoxin; oxidoreduc 97.5 9.3E-06 3.2E-10 64.4 -1.7 48 188-240 53-116 (140)
318 2dj3_A Protein disulfide-isome 97.5 9.9E-06 3.4E-10 63.4 -1.5 50 185-239 25-92 (133)
319 3h8q_A Thioredoxin reductase 3 97.5 0.00019 6.4E-09 55.1 5.8 56 85-147 19-81 (114)
320 3c7m_A Thiol:disulfide interch 97.4 0.00045 1.5E-08 57.5 8.6 32 81-112 17-49 (195)
321 1wmj_A Thioredoxin H-type; str 97.4 2.4E-05 8.3E-10 60.7 0.6 51 186-241 37-102 (130)
322 2dbc_A PDCL2, unnamed protein 97.4 4.6E-06 1.6E-10 66.2 -3.7 50 187-241 32-93 (135)
323 1qgv_A Spliceosomal protein U5 97.4 6.7E-06 2.3E-10 65.9 -2.8 51 186-241 24-90 (142)
324 1w4v_A Thioredoxin, mitochondr 97.4 1.2E-05 4E-10 62.0 -1.4 51 185-240 31-97 (119)
325 2j23_A Thioredoxin; immune pro 97.4 1.1E-05 3.6E-10 62.5 -1.7 51 186-241 34-101 (121)
326 3ec3_A Protein disulfide-isome 97.4 0.00066 2.2E-08 59.4 9.8 83 81-170 25-117 (250)
327 1thx_A Thioredoxin, thioredoxi 97.4 2.7E-05 9.3E-10 58.9 0.7 51 185-240 25-91 (115)
328 1faa_A Thioredoxin F; electron 97.4 1.3E-05 4.3E-10 62.0 -1.4 51 186-241 38-104 (124)
329 2xc2_A Thioredoxinn; oxidoredu 97.4 5.6E-06 1.9E-10 63.5 -3.5 50 187-241 35-98 (117)
330 3apq_A DNAJ homolog subfamily 97.4 1.8E-05 6.1E-10 67.5 -0.7 51 185-240 114-180 (210)
331 1mek_A Protein disulfide isome 97.4 4.6E-06 1.6E-10 63.6 -4.0 49 186-239 25-92 (120)
332 1xfl_A Thioredoxin H1; AT3G510 97.4 1.1E-05 3.7E-10 62.9 -1.9 50 187-241 40-104 (124)
333 2trx_A Thioredoxin; electron t 97.4 1.5E-05 5.3E-10 59.7 -1.0 51 185-240 20-86 (108)
334 3kp8_A Vkorc1/thioredoxin doma 97.4 6.9E-06 2.4E-10 62.5 -3.1 45 188-239 15-75 (106)
335 2vlu_A Thioredoxin, thioredoxi 97.4 1.6E-05 5.4E-10 61.2 -1.1 50 187-241 36-100 (122)
336 3aps_A DNAJ homolog subfamily 97.4 2.2E-05 7.5E-10 60.4 -0.3 50 185-239 21-86 (122)
337 1nsw_A Thioredoxin, TRX; therm 97.4 1.4E-05 4.6E-10 59.7 -1.6 50 186-240 18-83 (105)
338 2djj_A PDI, protein disulfide- 97.4 1.5E-05 5.1E-10 61.2 -1.4 49 185-239 25-92 (121)
339 1ti3_A Thioredoxin H, PTTRXH1; 97.4 2.3E-05 8E-10 59.1 -0.3 51 187-242 28-93 (113)
340 1t00_A Thioredoxin, TRX; redox 97.4 2E-05 6.9E-10 59.6 -0.8 51 185-240 23-89 (112)
341 1xwb_A Thioredoxin; dimerizati 97.3 1.2E-05 4E-10 60.0 -2.2 49 187-240 22-86 (106)
342 3d22_A TRXH4, thioredoxin H-ty 97.3 1.9E-05 6.4E-10 62.4 -1.1 50 187-241 48-112 (139)
343 3dxb_A Thioredoxin N-terminall 97.3 1.4E-05 4.8E-10 68.8 -2.1 52 185-241 30-97 (222)
344 2vm1_A Thioredoxin, thioredoxi 97.3 1.9E-05 6.6E-10 60.1 -1.1 50 187-241 30-94 (118)
345 2r2j_A Thioredoxin domain-cont 97.3 0.0012 4.1E-08 61.4 11.0 93 79-171 234-332 (382)
346 2e0q_A Thioredoxin; electron t 97.3 9E-06 3.1E-10 60.2 -3.0 50 186-240 17-81 (104)
347 3uvt_A Thioredoxin domain-cont 97.3 1.6E-05 5.5E-10 59.8 -1.6 50 186-240 22-90 (111)
348 1a0r_P Phosducin, MEKA, PP33; 97.3 1.5E-05 5.3E-10 70.0 -2.0 51 186-241 134-198 (245)
349 1dby_A Chloroplast thioredoxin 97.3 3.6E-05 1.2E-09 57.5 0.3 51 185-240 19-85 (107)
350 2o8v_B Thioredoxin 1; disulfid 97.3 1.3E-05 4.5E-10 62.8 -2.2 51 185-240 40-106 (128)
351 2vim_A Thioredoxin, TRX; thior 97.3 1.9E-05 6.4E-10 58.7 -1.6 51 186-241 20-85 (104)
352 1syr_A Thioredoxin; SGPP, stru 97.3 6.8E-06 2.3E-10 62.5 -4.3 51 186-241 27-92 (112)
353 1nho_A Probable thioredoxin; b 97.3 2.6E-05 9.1E-10 55.7 -1.0 46 188-240 4-65 (85)
354 1wik_A Thioredoxin-like protei 97.3 0.00056 1.9E-08 51.9 6.5 56 85-147 17-81 (109)
355 1fb6_A Thioredoxin M; electron 97.3 2.4E-05 8.2E-10 58.2 -1.4 52 185-241 18-85 (105)
356 3ph9_A Anterior gradient prote 97.2 5.1E-05 1.7E-09 61.6 0.4 53 185-242 44-115 (151)
357 2lst_A Thioredoxin; structural 96.3 4.5E-05 1.5E-09 59.4 0.0 50 185-239 19-91 (130)
358 2i4a_A Thioredoxin; acidophIle 97.2 3.9E-05 1.3E-09 57.2 -0.6 51 185-240 20-86 (107)
359 3l4n_A Monothiol glutaredoxin- 97.2 0.00038 1.3E-08 54.7 4.9 61 85-146 16-80 (127)
360 2oe3_A Thioredoxin-3; electron 97.2 1.6E-05 5.6E-10 60.9 -3.0 50 186-240 31-95 (114)
361 3qcp_A QSOX from trypanosoma b 97.2 4.7E-05 1.6E-09 72.8 -0.5 49 186-239 43-115 (470)
362 2f51_A Thioredoxin; electron t 97.2 2.7E-05 9.2E-10 60.0 -2.0 47 186-237 24-85 (118)
363 2yj7_A LPBCA thioredoxin; oxid 96.2 6E-05 2.1E-09 55.8 0.0 50 185-239 19-84 (106)
364 2qc7_A ERP31, ERP28, endoplasm 97.2 5.3E-05 1.8E-09 66.3 -0.5 48 185-239 22-94 (240)
365 4f82_A Thioredoxin reductase; 97.2 0.00031 1E-08 58.4 4.2 41 65-111 37-79 (176)
366 2trc_P Phosducin, MEKA, PP33; 97.1 2.3E-05 7.7E-10 67.6 -2.9 51 186-241 121-185 (217)
367 2i1u_A Thioredoxin, TRX, MPT46 97.1 4.6E-05 1.6E-09 58.3 -0.9 51 185-240 30-96 (121)
368 3cxg_A Putative thioredoxin; m 97.1 1.4E-05 4.7E-10 63.1 -4.2 48 187-239 42-105 (133)
369 2yzu_A Thioredoxin; redox prot 97.1 2.7E-05 9.4E-10 58.1 -2.8 50 186-240 19-84 (109)
370 1fo5_A Thioredoxin; disulfide 97.1 3.5E-05 1.2E-09 55.0 -2.2 45 189-240 6-66 (85)
371 2l57_A Uncharacterized protein 97.0 0.00017 5.8E-09 55.7 1.6 51 185-240 26-95 (126)
372 1ilo_A Conserved hypothetical 97.0 0.00011 3.7E-09 51.5 0.2 44 190-240 4-60 (77)
373 3emx_A Thioredoxin; structural 97.0 4.4E-05 1.5E-09 60.2 -2.3 49 188-241 34-105 (135)
374 2h8l_A Protein disulfide-isome 97.0 0.0038 1.3E-07 54.5 9.9 91 81-171 129-233 (252)
375 3t58_A Sulfhydryl oxidase 1; o 96.9 0.00011 3.8E-09 71.4 -0.4 49 186-239 31-100 (519)
376 3tue_A Tryparedoxin peroxidase 96.9 0.0016 5.3E-08 56.0 6.8 97 63-166 45-183 (219)
377 3fk8_A Disulphide isomerase; A 96.9 0.00016 5.5E-09 56.4 0.4 51 186-241 30-105 (133)
378 2axo_A Hypothetical protein AT 96.9 0.0064 2.2E-07 53.7 10.7 82 82-168 43-143 (270)
379 1oaz_A Thioredoxin 1; immune s 96.9 6.2E-05 2.1E-09 58.5 -2.4 51 185-240 21-101 (123)
380 2fwh_A Thiol:disulfide interch 96.8 0.00011 3.7E-09 57.8 -1.3 50 187-241 33-105 (134)
381 2es7_A Q8ZP25_salty, putative 96.8 0.0001 3.5E-09 59.1 -1.6 51 187-240 36-103 (142)
382 3bci_A Disulfide bond protein 96.8 0.0098 3.3E-07 49.1 10.5 37 128-168 142-178 (186)
383 1xiy_A Peroxiredoxin, pfaop; a 96.8 0.021 7.1E-07 47.5 12.4 95 65-165 33-179 (182)
384 2kuc_A Putative disulphide-iso 96.8 0.00024 8.2E-09 55.0 0.3 51 185-240 27-99 (130)
385 3gmf_A Protein-disulfide isome 96.7 0.014 4.8E-07 49.4 11.2 36 129-168 162-197 (205)
386 1sen_A Thioredoxin-like protei 96.7 0.00038 1.3E-08 56.9 1.2 53 185-242 46-118 (164)
387 3ed3_A Protein disulfide-isome 96.6 0.013 4.3E-07 52.6 10.2 91 69-168 154-267 (298)
388 1nm3_A Protein HI0572; hybrid, 96.5 0.0019 6.6E-08 55.8 4.6 86 68-163 154-240 (241)
389 3ec3_A Protein disulfide-isome 96.5 0.049 1.7E-06 47.3 13.4 92 80-172 131-232 (250)
390 3f9u_A Putative exported cytoc 96.5 0.00077 2.6E-08 55.0 1.5 52 185-241 47-144 (172)
391 3q6o_A Sulfhydryl oxidase 1; p 96.5 0.019 6.4E-07 49.5 10.4 123 32-168 114-240 (244)
392 2in3_A Hypothetical protein; D 96.3 0.05 1.7E-06 45.7 11.9 43 126-168 167-210 (216)
393 3kp9_A Vkorc1/thioredoxin doma 96.3 0.00029 9.7E-09 63.3 -2.5 45 188-239 200-260 (291)
394 1aba_A Glutaredoxin; electron 96.2 0.0014 4.9E-08 47.3 1.3 55 85-145 2-74 (87)
395 3kzq_A Putative uncharacterize 96.1 0.059 2E-06 45.2 11.5 43 126-168 160-203 (208)
396 1wou_A Thioredoxin -related pr 96.1 0.00037 1.3E-08 53.8 -2.5 48 187-239 26-103 (123)
397 2wci_A Glutaredoxin-4; redox-a 96.0 0.0066 2.2E-07 48.0 4.7 70 69-147 24-101 (135)
398 2ju5_A Thioredoxin disulfide i 96.0 0.00092 3.2E-08 53.8 -0.6 52 186-242 48-131 (154)
399 3zyw_A Glutaredoxin-3; metal b 95.8 0.025 8.5E-07 42.9 6.9 80 69-164 5-93 (111)
400 3ipz_A Monothiol glutaredoxin- 95.8 0.022 7.6E-07 42.9 6.6 50 91-147 31-84 (109)
401 3dml_A Putative uncharacterize 95.7 0.00027 9.3E-09 54.6 -4.6 51 186-241 19-89 (116)
402 1z6n_A Hypothetical protein PA 95.6 0.00067 2.3E-08 55.8 -2.9 48 186-238 55-120 (167)
403 1t1v_A SH3BGRL3, SH3 domain-bi 95.4 0.02 6.8E-07 41.7 5.0 55 85-146 4-70 (93)
404 2ct6_A SH3 domain-binding glut 95.4 0.035 1.2E-06 42.0 6.4 57 84-147 9-83 (111)
405 3iv4_A Putative oxidoreductase 95.4 0.00087 3E-08 51.3 -2.8 53 188-245 27-98 (112)
406 2djk_A PDI, protein disulfide- 95.1 0.0014 4.9E-08 51.3 -2.3 44 188-237 26-87 (133)
407 2jad_A Yellow fluorescent prot 95.0 0.0076 2.6E-07 55.4 1.6 61 85-146 263-328 (362)
408 3gx8_A Monothiol glutaredoxin- 94.9 0.0075 2.6E-07 46.7 1.3 52 91-146 29-84 (121)
409 2wem_A Glutaredoxin-related pr 94.8 0.053 1.8E-06 41.6 5.8 57 85-147 22-87 (118)
410 2e7p_A Glutaredoxin; thioredox 94.6 0.0026 9E-08 48.1 -2.0 42 191-239 24-82 (116)
411 1lu4_A Soluble secreted antige 94.4 0.0037 1.3E-07 48.1 -1.7 51 186-241 25-113 (136)
412 3ira_A Conserved protein; meth 94.3 0.0044 1.5E-07 51.2 -1.5 50 185-239 39-116 (173)
413 2fgx_A Putative thioredoxin; N 94.2 0.0066 2.2E-07 46.0 -0.6 48 188-241 31-92 (107)
414 1zzo_A RV1677; thioredoxin fol 94.1 0.0041 1.4E-07 47.7 -1.9 29 186-219 26-54 (136)
415 2xhf_A Peroxiredoxin 5; oxidor 93.9 0.017 5.9E-07 47.5 1.5 63 65-133 32-100 (171)
416 1ttz_A Conserved hypothetical 93.4 0.0039 1.3E-07 45.4 -3.1 44 190-240 4-58 (87)
417 1t4y_A Adaptive-response senso 93.1 1.1 3.9E-05 33.2 9.9 84 84-167 13-98 (105)
418 2h30_A Thioredoxin, peptide me 93.1 0.013 4.4E-07 46.7 -0.8 28 186-218 39-66 (164)
419 2b1k_A Thiol:disulfide interch 93.0 0.021 7.2E-07 45.8 0.5 27 186-217 52-78 (168)
420 3raz_A Thioredoxin-related pro 92.9 0.013 4.5E-07 46.2 -0.8 29 186-219 25-53 (151)
421 2lus_A Thioredoxion; CR-Trp16, 91.8 0.022 7.5E-07 44.1 0.0 28 187-219 28-55 (143)
422 3erw_A Sporulation thiol-disul 92.1 0.015 5.2E-07 45.0 -1.5 29 186-219 35-63 (145)
423 3tdg_A DSBG, putative uncharac 91.4 0.15 5E-06 45.0 4.0 30 80-109 146-175 (273)
424 3gn3_A Putative protein-disulf 91.4 0.25 8.5E-06 40.7 5.2 41 80-120 13-54 (182)
425 1ego_A Glutaredoxin; electron 91.2 0.033 1.1E-06 39.2 -0.4 40 194-239 7-67 (85)
426 1kng_A Thiol:disulfide interch 90.8 0.027 9.3E-07 44.3 -1.3 27 186-217 43-69 (156)
427 3or5_A Thiol:disulfide interch 90.6 0.045 1.5E-06 43.4 -0.2 30 186-220 35-64 (165)
428 2k8s_A Thioredoxin; dimer, str 90.6 0.013 4.4E-07 41.2 -3.1 40 194-239 8-64 (80)
429 2ls5_A Uncharacterized protein 89.6 0.057 1.9E-06 42.8 0.0 29 186-219 34-63 (159)
430 3gl3_A Putative thiol:disulfid 89.8 0.055 1.9E-06 42.3 -0.3 30 186-220 29-58 (152)
431 2x8g_A Thioredoxin glutathione 89.2 0.17 5.9E-06 49.5 2.7 59 85-147 20-82 (598)
432 2wul_A Glutaredoxin related pr 88.6 0.82 2.8E-05 34.9 5.6 50 91-146 33-86 (118)
433 2lrt_A Uncharacterized protein 88.3 0.082 2.8E-06 41.8 -0.2 28 187-219 37-64 (152)
434 3kcm_A Thioredoxin family prot 86.8 0.11 3.6E-06 40.7 -0.4 29 186-219 29-57 (154)
435 1u6t_A SH3 domain-binding glut 86.7 0.18 6.3E-06 38.8 0.9 56 84-146 1-74 (121)
436 3gn3_A Putative protein-disulf 85.4 0.39 1.4E-05 39.5 2.4 37 126-163 145-181 (182)
437 2hyx_A Protein DIPZ; thioredox 85.3 0.23 7.8E-06 45.6 0.9 29 186-219 83-111 (352)
438 3fkf_A Thiol-disulfide oxidore 85.0 0.29 1E-05 37.6 1.3 29 186-219 34-62 (148)
439 2dlx_A UBX domain-containing p 84.9 0.21 7.1E-06 40.1 0.4 50 185-237 42-110 (153)
440 1kte_A Thioltransferase; redox 83.9 0.081 2.8E-06 38.9 -2.3 44 189-239 14-77 (105)
441 1i5g_A Tryparedoxin II; electr 82.8 0.3 1E-05 37.6 0.6 30 186-220 29-58 (144)
442 1o8x_A Tryparedoxin, TRYX, TXN 82.2 0.33 1.1E-05 37.6 0.6 30 186-220 29-58 (146)
443 2b5x_A YKUV protein, TRXY; thi 81.7 0.4 1.4E-05 36.7 0.9 30 186-220 30-59 (148)
444 3eur_A Uncharacterized protein 81.5 0.38 1.3E-05 37.0 0.7 31 186-221 32-65 (142)
445 1rw1_A Conserved hypothetical 80.9 1.2 4.1E-05 33.5 3.3 21 85-105 2-22 (114)
446 1o73_A Tryparedoxin; electron 80.9 0.4 1.4E-05 36.9 0.6 30 186-220 29-58 (144)
447 3s9f_A Tryparedoxin; thioredox 80.7 0.4 1.4E-05 38.3 0.6 30 186-220 49-78 (165)
448 3hcz_A Possible thiol-disulfid 80.6 0.58 2E-05 35.8 1.5 30 186-220 32-61 (148)
449 2imf_A HCCA isomerase, 2-hydro 80.5 1.5 5.2E-05 36.2 4.1 40 125-168 157-196 (203)
450 2lrn_A Thiol:disulfide interch 80.4 0.72 2.5E-05 35.8 2.0 30 186-220 30-59 (152)
451 1z3e_A Regulatory protein SPX; 79.6 1.4 4.7E-05 34.1 3.4 22 85-106 3-24 (132)
452 2l5o_A Putative thioredoxin; s 79.6 0.68 2.3E-05 35.8 1.6 28 187-219 30-57 (153)
453 3ha9_A Uncharacterized thiored 78.7 0.65 2.2E-05 36.6 1.2 30 186-220 38-67 (165)
454 2kok_A Arsenate reductase; bru 78.7 1.5 5.2E-05 33.2 3.3 22 85-106 7-28 (120)
455 2cq9_A GLRX2 protein, glutared 77.4 0.26 9E-06 38.0 -1.5 43 190-239 30-89 (130)
456 2f9s_A Thiol-disulfide oxidore 77.2 0.6 2.1E-05 36.2 0.6 29 186-219 27-55 (151)
457 3gl5_A Putative DSBA oxidoredu 76.7 3.4 0.00012 35.3 5.3 41 126-169 174-214 (239)
458 3feu_A Putative lipoprotein; a 76.6 0.37 1.3E-05 39.6 -0.9 38 186-231 23-60 (185)
459 3lwa_A Secreted thiol-disulfid 76.3 0.66 2.2E-05 37.4 0.6 31 186-221 60-90 (183)
460 3lor_A Thiol-disulfide isomera 75.6 0.54 1.8E-05 36.7 -0.1 30 186-220 31-61 (160)
461 3l78_A Regulatory protein SPX; 75.2 2.2 7.5E-05 32.4 3.3 21 85-105 2-22 (120)
462 2lja_A Putative thiol-disulfid 75.1 0.97 3.3E-05 34.8 1.3 28 187-219 32-59 (152)
463 3ewl_A Uncharacterized conserv 74.5 0.69 2.4E-05 35.3 0.2 30 186-220 28-60 (142)
464 3ia1_A THIO-disulfide isomeras 74.4 0.86 3E-05 35.3 0.8 29 186-219 31-59 (154)
465 2g2q_A Glutaredoxin-2; thiored 73.7 1.5 5.2E-05 33.2 1.9 30 82-111 2-31 (124)
466 2hze_A Glutaredoxin-1; thiored 73.5 0.18 6.1E-06 37.9 -3.3 45 188-239 20-84 (114)
467 2ht9_A Glutaredoxin-2; thiored 73.2 0.29 1E-05 38.8 -2.3 43 190-239 52-111 (146)
468 3fz5_A Possible 2-hydroxychrom 72.6 2.9 9.8E-05 34.6 3.7 36 126-165 164-199 (202)
469 3hz8_A Thiol:disulfide interch 72.6 0.18 6.1E-06 41.8 -3.9 30 186-220 25-54 (193)
470 4evm_A Thioredoxin family prot 72.3 0.88 3E-05 33.9 0.4 28 186-218 23-50 (138)
471 2yan_A Glutaredoxin-3; oxidore 72.0 0.5 1.7E-05 34.8 -1.1 38 198-239 30-81 (105)
472 2p31_A CL683, glutathione pero 71.7 1.7 5.8E-05 35.0 2.0 31 187-222 51-81 (181)
473 2p5q_A Glutathione peroxidase 71.2 1.8 6.2E-05 34.0 2.0 31 186-221 33-63 (170)
474 3kij_A Probable glutathione pe 71.0 1.8 6.2E-05 34.8 2.0 31 187-222 40-70 (180)
475 3fz4_A Putative arsenate reduc 70.8 3.2 0.00011 31.5 3.3 22 85-106 5-26 (120)
476 2v1m_A Glutathione peroxidase; 70.8 1.9 6.3E-05 33.8 2.0 31 186-221 32-62 (169)
477 3eyt_A Uncharacterized protein 70.5 0.84 2.9E-05 35.5 -0.1 30 186-220 29-59 (158)
478 3dwv_A Glutathione peroxidase- 70.0 2 6.7E-05 34.9 2.0 37 186-227 47-83 (187)
479 3hdc_A Thioredoxin family prot 69.6 0.91 3.1E-05 35.6 -0.1 30 186-220 42-71 (158)
480 2f8a_A Glutathione peroxidase 69.2 0.93 3.2E-05 37.9 -0.1 38 187-229 49-86 (208)
481 1wwj_A Circadian clock protein 68.5 2.9 0.0001 31.0 2.4 60 82-141 7-67 (105)
482 3gkx_A Putative ARSC family re 66.8 3.6 0.00012 31.2 2.8 21 85-105 6-26 (120)
483 3hd5_A Thiol:disulfide interch 66.3 1.2 4E-05 36.4 -0.1 30 186-220 26-55 (195)
484 1eej_A Thiol:disulfide interch 65.6 1 3.5E-05 37.8 -0.6 28 185-217 86-113 (216)
485 2vup_A Glutathione peroxidase- 65.5 3 0.0001 33.8 2.3 31 186-221 49-79 (190)
486 2obi_A PHGPX, GPX-4, phospholi 64.7 2.9 9.9E-05 33.6 2.0 31 187-222 49-79 (183)
487 4fo5_A Thioredoxin-like protei 64.6 0.88 3E-05 34.9 -1.2 30 186-220 33-62 (143)
488 3fw2_A Thiol-disulfide oxidore 64.0 3.1 0.00011 31.9 2.0 29 186-219 34-64 (150)
489 3cmi_A Peroxiredoxin HYR1; thi 63.6 2.8 9.7E-05 33.2 1.8 30 186-221 33-62 (171)
490 3h93_A Thiol:disulfide interch 63.4 0.54 1.9E-05 38.4 -2.7 40 186-231 26-65 (192)
491 2ywi_A Hypothetical conserved 63.1 2 6.8E-05 34.8 0.7 28 188-220 49-76 (196)
492 3rpp_A Glutathione S-transfera 62.5 8.5 0.00029 32.6 4.7 41 126-167 173-214 (234)
493 1jfu_A Thiol:disulfide interch 62.3 2 6.8E-05 34.5 0.6 29 187-220 62-90 (186)
494 2gs3_A PHGPX, GPX-4, phospholi 61.6 3.6 0.00012 33.2 2.0 31 187-222 51-81 (185)
495 1s3c_A Arsenate reductase; ARS 60.7 4.6 0.00016 31.6 2.4 78 85-168 4-90 (141)
496 2cvb_A Probable thiol-disulfid 60.0 1.9 6.4E-05 34.8 0.0 30 186-220 34-63 (188)
497 3gyk_A 27KDA outer membrane pr 59.8 0.71 2.4E-05 37.0 -2.6 41 186-231 23-63 (175)
498 3rdw_A Putative arsenate reduc 59.7 4.1 0.00014 30.9 1.9 21 85-105 7-27 (121)
499 3kh7_A Thiol:disulfide interch 59.6 2.3 8E-05 34.0 0.5 28 186-218 59-86 (176)
500 1t3b_A Thiol:disulfide interch 57.7 1.8 6.3E-05 36.1 -0.4 27 185-216 86-112 (211)
No 1
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.95 E-value=2.1e-28 Score=215.49 Aligned_cols=176 Identities=21% Similarity=0.306 Sum_probs=141.2
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCC---cEEEEEeCCCChhhHhhcC
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI---PHFAIEESAIRPSILSKYG 132 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~---~~v~~~~~~~~~~l~~~~~ 132 (316)
...+..++.++ |+++ ..++++++|+|||+||++|+.+.|.|+++++.+++. ..+..+|++.+++++++|+
T Consensus 14 ~~~v~~l~~~~--~~~~-----~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~ 86 (241)
T 3idv_A 14 ENGVLVLNDAN--FDNF-----VADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFD 86 (241)
T ss_dssp ETTEEEECTTT--HHHH-----HTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTT
T ss_pred CCCcEEecccC--HHHH-----HhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcC
Confidence 44567777777 7776 356899999999999999999999999999998764 6666778999999999999
Q ss_pred CCccceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhCCCCCC--------CcccccccCccccCCCccccccCCcccCCh
Q 021221 133 VHGFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTASLDKI--------SPDKVGKASNHEKHNNTEEESCPFSWARSP 203 (316)
Q Consensus 133 I~~~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~~~~~~--------~~~~~~~~~~~~~~~~v~f~~~~~pw~~~~ 203 (316)
|+++||+++| +|+.+ +|.|.++.++|.+|+.+...+.... +.+.+.........+++.| ++ |||++|
T Consensus 87 v~~~Pt~~~~~~g~~~-~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f-~a--~wC~~C 162 (241)
T 3idv_A 87 VSGYPTIKILKKGQAV-DYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEF-YA--PWCGHC 162 (241)
T ss_dssp CCSSSEEEEEETTEEE-ECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHCSEEEEEE-EC--TTCTGG
T ss_pred CCcCCEEEEEcCCCcc-cccCcccHHHHHHHHhhccCcccccccccceeccHHHHHHhhccCCeEEEEE-EC--CCCHHH
Confidence 9999999999 55544 7999999999999999998753221 1111111112234577888 99 999999
Q ss_pred hhhhchHHHHHHHHHHH-------------------HHHhHHhhhhhHhHhhccceehhh
Q 021221 204 ENLLQQETYLALATAFV-------------------LLRLVYIFLPTLLIFAQFTWRRLI 244 (316)
Q Consensus 204 ~~~l~~~~~~~lA~~f~-------------------~~~~~i~~~Ptl~~~~~~~~~~~~ 244 (316)
+.+ .|.|..+|..+. +.+|+|.++||+.+|.+|..+.|.
T Consensus 163 ~~~--~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~ 220 (241)
T 3idv_A 163 KKL--APEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGRPYDYN 220 (241)
T ss_dssp GGT--HHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEECC
T ss_pred HHh--HHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECCeEEEec
Confidence 999 999999998873 389999999999999988755443
No 2
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.90 E-value=1.6e-23 Score=183.39 Aligned_cols=154 Identities=12% Similarity=0.075 Sum_probs=123.5
Q ss_pred cCCCeEEEEEE-----cCCChHHHhhhHHHHHHHHHc--CCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCceeEEE
Q 021221 79 NSHEYVAVLFY-----ASWCPFSRNFRPSFSVLSSLY--SSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRY 150 (316)
Q Consensus 79 ~~~~~vlV~Fy-----a~WC~~Ck~~~p~~~~la~~~--~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~~~~ 150 (316)
+..++++|.|| +|||++|+.+.|.|+++++.+ .+.+.+..+|++.++++|++|||+++||+++| +|+...+|
T Consensus 18 ~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~~~~~~~~~ 97 (229)
T 2ywm_A 18 EFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVIEGDKDYGIRY 97 (229)
T ss_dssp HCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEEESSSCCCEEE
T ss_pred hccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEEECCCccccee
Confidence 44567777776 999999999999999998887 66778888899999999999999999999999 66788999
Q ss_pred eCCCCHHHHHHHHHHhhC---CCCCCCcccccccCccccCC-CccccccCCcccCChhhhhchHHHHHHHHHH-------
Q 021221 151 HGSRTLDSLVAFYSDVTA---SLDKISPDKVGKASNHEKHN-NTEEESCPFSWARSPENLLQQETYLALATAF------- 219 (316)
Q Consensus 151 ~G~~~~~~l~~fi~~~~~---~~~~~~~~~~~~~~~~~~~~-~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f------- 219 (316)
.|.++.++|.+|+.+.+. .....+.+.+......+..+ ++.| ++ |||++|+.+ .|.+..++..+
T Consensus 98 ~G~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~F-~a--~wC~~C~~~--~~~~~~~~~~~~~v~~~~ 172 (229)
T 2ywm_A 98 IGLPAGLEFTTLINGIFHVSQRKPQLSEKTLELLQVVDIPIEIWVF-VT--TSCGYCPSA--AVMAWDFALANDYITSKV 172 (229)
T ss_dssp ESCCCTTHHHHHHHHHHHHHTTCCSCCHHHHHHHTTCCSCEEEEEE-EC--TTCTTHHHH--HHHHHHHHHHCTTEEEEE
T ss_pred cCCccHHHHHHHHHHHHhccCCccCCCHHHHHHHHhcCCCeEEEEE-EC--CCCcchHHH--HHHHHHHHHHCCCeEEEE
Confidence 999999999999998754 22222222222211223334 6678 99 999999999 99999999876
Q ss_pred --------HHHHhHHhhhhhHhHhhccc
Q 021221 220 --------VLLRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 220 --------~~~~~~i~~~Ptl~~~~~~~ 239 (316)
++.+|+|.++||+.+ +|.
T Consensus 173 vd~~~~~~l~~~~~v~~~Pt~~~--~G~ 198 (229)
T 2ywm_A 173 IDASENQDLAEQFQVVGVPKIVI--NKG 198 (229)
T ss_dssp EEGGGCHHHHHHTTCCSSSEEEE--GGG
T ss_pred EECCCCHHHHHHcCCcccCEEEE--CCE
Confidence 248899999999988 665
No 3
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.89 E-value=3.3e-23 Score=180.83 Aligned_cols=155 Identities=12% Similarity=0.114 Sum_probs=123.5
Q ss_pred CCCeEEEEEEcC-CChHHHhhhHHHHHHHHHcCCCcEEEEEeCCC--ChhhHhhcCCCccceEEEE-eCcee-EEEeCCC
Q 021221 80 SHEYVAVLFYAS-WCPFSRNFRPSFSVLSSLYSSIPHFAIEESAI--RPSILSKYGVHGFPTLFLL-NSSMR-VRYHGSR 154 (316)
Q Consensus 80 ~~~~vlV~Fya~-WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~--~~~l~~~~~I~~~Pti~l~-~g~~~-~~~~G~~ 154 (316)
.+..++|+||++ ||++|+.+.|.++++++.. +.+.+..+|++. +++++++|||+++||+++| +|+.. .+|.|.+
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~~-~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~G~~ 99 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSELT-DKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQDGKDFGVRYFGLP 99 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTTC-TTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEETTBCCSEEEESCC
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhhC-CceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcCCceeeEEEeccC
Confidence 456778999999 9999999999999999764 446667778888 8999999999999999999 67664 8999999
Q ss_pred CHHHHHHHHHHhhC---CCCCCCcccccccCccccCC-CccccccCCcccCChhhhhchHHHHHHHHHHH----------
Q 021221 155 TLDSLVAFYSDVTA---SLDKISPDKVGKASNHEKHN-NTEEESCPFSWARSPENLLQQETYLALATAFV---------- 220 (316)
Q Consensus 155 ~~~~l~~fi~~~~~---~~~~~~~~~~~~~~~~~~~~-~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~---------- 220 (316)
+.+++.+|+..... .....+.+.+......+..+ ++.| ++ |||++|+++ .|.+..++..+.
T Consensus 100 ~~~~l~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~v~F-~a--~wC~~C~~~--~p~~~~l~~~~~~~~~~~v~~~ 174 (226)
T 1a8l_A 100 AGHEFAAFLEDIVDVSREETNLMDETKQAIRNIDQDVRILVF-VT--PTCPYCPLA--VRMAHKFAIENTKAGKGKILGD 174 (226)
T ss_dssp CTTHHHHHHHHHHHHHHTCCCCCHHHHHHHTTCCSCEEEEEE-EC--SSCTTHHHH--HHHHHHHHHHHHHTTCCCEEEE
T ss_pred cHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCcEEEEE-eC--CCCCccHHH--HHHHHHHHHhcccccCCcEEEE
Confidence 99999999988653 22222222221111223345 7888 99 999999999 999999998885
Q ss_pred ----------HHHhHHhhhhhHhHhhccce
Q 021221 221 ----------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 221 ----------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
+.+|+|.++||+.+|.+|.-
T Consensus 175 ~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~ 204 (226)
T 1a8l_A 175 MVEAIEYPEWADQYNVMAVPKIVIQVNGED 204 (226)
T ss_dssp EEEGGGCHHHHHHTTCCSSCEEEEEETTEE
T ss_pred EEEcccCHHHHHhCCCcccCeEEEEeCCce
Confidence 37899999999999988764
No 4
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.89 E-value=1.7e-23 Score=214.13 Aligned_cols=155 Identities=18% Similarity=0.321 Sum_probs=131.0
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEEeCceeEEEeCCCCHHHH
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSL 159 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l 159 (316)
.+++++|+|||+||++|+.+.|.|+++++.|++.+.+..+|++++++++++|||+++||+++++++.+.+|.|.++.++|
T Consensus 454 ~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~g~~~~~~l 533 (780)
T 3apo_A 454 DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQAYPTTVVFNQSSIHEYEGHHSAEQI 533 (780)
T ss_dssp CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEECSCSCHHHH
T ss_pred CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcCCeEEEEcCCceeeecCcccHHHH
Confidence 67899999999999999999999999999998777777788999999999999999999999944445889999999999
Q ss_pred HHHHHHhhCCCCC-C---CcccccccCccccCCCccccccCCcccCChhhhhchHHHHHHHHHHH---------------
Q 021221 160 VAFYSDVTASLDK-I---SPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAFV--------------- 220 (316)
Q Consensus 160 ~~fi~~~~~~~~~-~---~~~~~~~~~~~~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~--------------- 220 (316)
.+|+++.+++.+. . ++++++...+.+..+++.| ++ |||+||+++ .|.|+++|..|.
T Consensus 534 ~~fi~~~~~~~v~~l~~~~f~~~v~~~~~~~~~lv~F-~a--p~C~~c~~~--~p~~~~lA~~~~~~v~~~~vd~~~~~~ 608 (780)
T 3apo_A 534 LEFIEDLRNPSVVSLTPSTFNELVKQRKHDEVWMVDF-YS--PWSHPSQVL--MPEWKRMARTLTGLINVGSVDCGQYHS 608 (780)
T ss_dssp HHHHHHHHSCSEEECCHHHHHHHTTTCCTTCCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHHTTTSEEEEEETTTTHH
T ss_pred HHHHHhhcccceeecCcccHHHHhhccCCCCeEEEEE-EC--CCCHHHHHh--hHHHHHHHHHhhCCeEEEEEECcchHH
Confidence 9999999985422 2 2333333322234468888 99 999999999 999999999983
Q ss_pred -HHHhHHhhhhhHhHhhccc
Q 021221 221 -LLRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 221 -~~~~~i~~~Ptl~~~~~~~ 239 (316)
+.+++|.+|||+.+|..|.
T Consensus 609 l~~~~~v~~~Pti~~~~~~~ 628 (780)
T 3apo_A 609 FCTQENVQRYPEIRFYPQKS 628 (780)
T ss_dssp HHHHTTCCSSSEEEEECCCS
T ss_pred HHHHcCCCCCCeEEEEcCCC
Confidence 4789999999999998875
No 5
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.88 E-value=3.5e-23 Score=193.34 Aligned_cols=163 Identities=14% Similarity=0.144 Sum_probs=129.7
Q ss_pred cHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCC--CChhhHhhcCCCc--cceEEEE-
Q 021221 68 SLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA--IRPSILSKYGVHG--FPTLFLL- 142 (316)
Q Consensus 68 ~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~--~~~~l~~~~~I~~--~Pti~l~- 142 (316)
++.+. .....++++|+||++||++|+++.|.|+++++.|++.+.+..+|++ .++.+++.|||++ +|+++++
T Consensus 126 ~~~~~----~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~ 201 (361)
T 3uem_A 126 TAPKI----FGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLIT 201 (361)
T ss_dssp THHHH----HSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEE
T ss_pred cHHHH----hcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccCCccEEEEE
Confidence 36655 4455678899999999999999999999999999998888888888 6889999999998 9999999
Q ss_pred eCceeEEEe---CCCCHHHHHHHHHHhhCCCCCC------C--------c-----ccccccC-ccccCCCccccccCCcc
Q 021221 143 NSSMRVRYH---GSRTLDSLVAFYSDVTASLDKI------S--------P-----DKVGKAS-NHEKHNNTEEESCPFSW 199 (316)
Q Consensus 143 ~g~~~~~~~---G~~~~~~l~~fi~~~~~~~~~~------~--------~-----~~~~~~~-~~~~~~~v~f~~~~~pw 199 (316)
.++...+|. |.++.++|.+|+++.+....+. . . +.+.... ...+.+++.| ++ ||
T Consensus 202 ~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~~k~~lv~f-~a--~w 278 (361)
T 3uem_A 202 LEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEF-YA--PW 278 (361)
T ss_dssp CC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTCTTCEEEEEE-EC--TT
T ss_pred cCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhhhcccCCCcEEEEE-ec--Cc
Confidence 556667776 7899999999999987633111 0 0 0110111 2345678899 99 99
Q ss_pred cCChhhhhchHHHHHHHHHHHH----------------HHhHHhhhhhHhHhhccc
Q 021221 200 ARSPENLLQQETYLALATAFVL----------------LRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 200 ~~~~~~~l~~~~~~~lA~~f~~----------------~~~~i~~~Ptl~~~~~~~ 239 (316)
|+||+++ .|.|.++|..|.. .+++|.+|||+.+|++|.
T Consensus 279 C~~C~~~--~p~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~~Pt~~~~~~~~ 332 (361)
T 3uem_A 279 CGHCKQL--APIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASA 332 (361)
T ss_dssp CHHHHHH--HHHHHHHHHHTTTCSSEEEEEEETTTCBCSSCCCCSSSEEEEECSSS
T ss_pred CHhHHHH--HHHHHHHHHHhccCCcEEEEEEECCccchhhcCCcccCeEEEEECCC
Confidence 9999999 9999999998842 688999999999998773
No 6
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.88 E-value=1.4e-22 Score=179.82 Aligned_cols=193 Identities=11% Similarity=0.055 Sum_probs=139.1
Q ss_pred HHHHHhHHhccCCCeEEEEEEcCC--ChHHHhhhHHHHHHHHHcC---CC--cEEEEEeCCCChhhHhhcCCCccceEEE
Q 021221 69 LQMALNMVHKNSHEYVAVLFYASW--CPFSRNFRPSFSVLSSLYS---SI--PHFAIEESAIRPSILSKYGVHGFPTLFL 141 (316)
Q Consensus 69 ~~~~~~~i~~~~~~~vlV~Fya~W--C~~Ck~~~p~~~~la~~~~---~~--~~v~~~~~~~~~~l~~~~~I~~~Pti~l 141 (316)
..+.+..++.+-+++++|.||++| |++|+.+.|.++++++.++ +. +.+...|++++++++++|||+++||+++
T Consensus 13 ~~~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i 92 (243)
T 2hls_A 13 FRRELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAF 92 (243)
T ss_dssp HHHHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEE
Confidence 344455566666789999999999 9999999999999999853 32 6677778889999999999999999999
Q ss_pred EeCceeEEEeCCCCHHHHHHHHHHhhC---CCCCCCcccccccC-cc-ccCCCccccccCCcccCChhhhhchHHHHHHH
Q 021221 142 LNSSMRVRYHGSRTLDSLVAFYSDVTA---SLDKISPDKVGKAS-NH-EKHNNTEEESCPFSWARSPENLLQQETYLALA 216 (316)
Q Consensus 142 ~~g~~~~~~~G~~~~~~l~~fi~~~~~---~~~~~~~~~~~~~~-~~-~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA 216 (316)
|+| ..+|.|.++.+++..|+..... .....+ ++..+.. .. ...+++.| ++ |||++|+++ .|.|..+|
T Consensus 93 ~~g--~~~~~G~~~~~~l~~fv~~~l~~~~~~~~l~-~~~~~~~~~~~~~~~vv~F-~a--~wC~~C~~~--~p~l~~la 164 (243)
T 2hls_A 93 LGG--EVRWTGIPAGEEIRALVEVIMRLSEDESGLE-DATKEALKSLKGRVHIETI-IT--PSCPYCPYA--VLLAHMFA 164 (243)
T ss_dssp TTT--TEEEESCCCTTHHHHHHHHHHHHHTTCCCCC-HHHHHHHHHCCSCEEEEEE-EC--SSCSSHHHH--HHHHHHHH
T ss_pred ECC--ceeEcCCCcHHHHHHHHHHHHhccCCCCCCC-HHHHHHHHHcCCCcEEEEE-EC--CCCCCcHHH--HHHHHHHH
Confidence 965 8899999888899999887642 222222 1111111 11 22345667 99 999999999 99999999
Q ss_pred HHHH--------------------HHHhHHhhhhhHhHhhccceehhhhcccccccchhhhHHHHHHHHHHHHhcccccC
Q 021221 217 TAFV--------------------LLRLVYIFLPTLLIFAQFTWRRLIRNLKLGSLLEHPRTYLNRAIQLFKTLNEPCKR 276 (316)
Q Consensus 217 ~~f~--------------------~~~~~i~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~ 276 (316)
..+. +.+|+|.++||+.+ +|..+ +.+... ..++.++|++..+.
T Consensus 165 ~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i--~G~~~-~~G~~~--------------~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 165 YEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI--NGYLV-FVGVPY--------------EEDFLDYVKSAAEG 227 (243)
T ss_dssp HHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTEEE-EESCCC--------------HHHHHHHHHHHHTT
T ss_pred HHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE--CCEEE-EeCCCC--------------HHHHHHHHHHHhhc
Confidence 8882 26889999999877 65521 111111 12344677777788
Q ss_pred Cccccchhhh
Q 021221 277 SNLQEGALNA 286 (316)
Q Consensus 277 ~~~~~g~~~~ 286 (316)
++..+|.+++
T Consensus 228 ~~~~~g~~~~ 237 (243)
T 2hls_A 228 RLTVKGPIRA 237 (243)
T ss_dssp CCCCCC----
T ss_pred ccccCCCcCc
Confidence 8888998775
No 7
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.88 E-value=6.4e-22 Score=153.01 Aligned_cols=93 Identities=19% Similarity=0.360 Sum_probs=81.4
Q ss_pred HHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCcee
Q 021221 69 LQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMR 147 (316)
Q Consensus 69 ~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~ 147 (316)
|++. +...++++++|+|||+||++|+.+.|.++++++.++++. +..+|++++++++++|+|+++||+++| +|+.+
T Consensus 11 f~~~---l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~~~-~~~vd~d~~~~l~~~~~V~~~PT~~~~~~G~~v 86 (105)
T 3zzx_A 11 FTKQ---LNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSDVV-FLKVDVDECEDIAQDNQIACMPTFLFMKNGQKL 86 (105)
T ss_dssp HHHH---HHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEE-EEEEETTTCHHHHHHTTCCBSSEEEEEETTEEE
T ss_pred HHHH---HHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCCeE-EEEEecccCHHHHHHcCCCeecEEEEEECCEEE
Confidence 5555 223467999999999999999999999999999998865 445578899999999999999999999 89999
Q ss_pred EEEeCCCCHHHHHHHHHHh
Q 021221 148 VRYHGSRTLDSLVAFYSDV 166 (316)
Q Consensus 148 ~~~~G~~~~~~l~~fi~~~ 166 (316)
.++.| .+.++|.++|+++
T Consensus 87 ~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 87 DSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp EEEES-CCHHHHHHHHHHH
T ss_pred EEEeC-cCHHHHHHHHHhc
Confidence 99999 4899999999875
No 8
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.87 E-value=3.6e-22 Score=204.40 Aligned_cols=187 Identities=14% Similarity=0.215 Sum_probs=146.8
Q ss_pred CchhHHHHHHhhhcCCCccccCCCCCcceEEeCCcccHHHHHhHHhcc--CCCeEEEEEEcCCChHHHhhhHHHHHHHHH
Q 021221 32 PTESVTDSIFRFQDSFCPISCNDFQDIVGVIEGDEVSLQMALNMVHKN--SHEYVAVLFYASWCPFSRNFRPSFSVLSSL 109 (316)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~i~~~--~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~ 109 (316)
+.+.+.+|+..+.. .++..+++++ |++. +.+ .+++++|.||||||++|+++.|.|+++++.
T Consensus 529 ~~~~l~~fi~~~~~-----------~~v~~l~~~~--f~~~----v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~ 591 (780)
T 3apo_A 529 SAEQILEFIEDLRN-----------PSVVSLTPST--FNEL----VKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMART 591 (780)
T ss_dssp CHHHHHHHHHHHHS-----------CSEEECCHHH--HHHH----TTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhcc-----------cceeecCccc--HHHH----hhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHH
Confidence 34556666665543 2455566554 6665 333 357899999999999999999999999999
Q ss_pred cCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCc----eeEEEeC-CCCHHHHHHHHHHhhCCCCC-CCcccccccC
Q 021221 110 YSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSS----MRVRYHG-SRTLDSLVAFYSDVTASLDK-ISPDKVGKAS 182 (316)
Q Consensus 110 ~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~----~~~~~~G-~~~~~~l~~fi~~~~~~~~~-~~~~~~~~~~ 182 (316)
+++.+.++..||+.+..+|++|+|+++||+++| .|. ....|.| .++.++|.+|+.+...+... .+.+.+....
T Consensus 592 ~~~~v~~~~vd~~~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~v~~l~~~~~~~~~ 671 (780)
T 3apo_A 592 LTGLINVGSVDCGQYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQASIDLTPQTFNEKV 671 (780)
T ss_dssp HTTTSEEEEEETTTTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCCCSEEECHHHHHHHT
T ss_pred hhCCeEEEEEECcchHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhcccccccCCHHHHHHHH
Confidence 998888999999999999999999999999999 443 2578999 89999999999998864322 2333332212
Q ss_pred -ccccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccce
Q 021221 183 -NHEKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 183 -~~~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
.....+++.| ++ |||++|+++ .|.+..+|..|. +.+++|.++||+.+|.+|..
T Consensus 672 ~~~~~~v~v~F-~a--~wC~~C~~~--~p~~~~la~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 741 (780)
T 3apo_A 672 LQGKTHWVVDF-YA--PWSGPSQNF--APEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERA 741 (780)
T ss_dssp TTCSSCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETT
T ss_pred hcCCCeEEEEE-EC--CCCHHHHHH--HHHHHHHHHHhcCCceEEEEECCCCHHHHHhcCCCcCCEEEEEcCCCc
Confidence 2345578888 99 999999999 999999999873 37899999999999987764
No 9
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.86 E-value=2.1e-22 Score=187.65 Aligned_cols=165 Identities=14% Similarity=0.193 Sum_probs=127.4
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHH-------HHHHHHHcCC-CcEEEEEeCCCChhh
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPS-------FSVLSSLYSS-IPHFAIEESAIRPSI 127 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~-------~~~la~~~~~-~~~v~~~~~~~~~~l 127 (316)
+..+..++.++ |++. + +++++++|+||||||+ |+++.|. |+++++.+.+ .+.++.+||+.++++
T Consensus 10 ~~~v~~l~~~~--f~~~----i-~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l 81 (350)
T 1sji_A 10 KDRVVSLTEKN--FKQV----L-KKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKL 81 (350)
T ss_dssp CCCCEEECHHH--HHHH----H-TTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHH
T ss_pred CCccEECCHHH--HHHH----H-hhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHH
Confidence 34455565555 7776 3 4678999999999999 9999999 9999999876 377888899999999
Q ss_pred HhhcCCCccceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhCCCCCC--CcccccccCc-cccCCCccccccCCcccCCh
Q 021221 128 LSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTASLDKI--SPDKVGKASN-HEKHNNTEEESCPFSWARSP 203 (316)
Q Consensus 128 ~~~~~I~~~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~~~~~~--~~~~~~~~~~-~~~~~~v~f~~~~~pw~~~~ 203 (316)
|++|+|+++||+++| +|+ +.+|.|.++.+.|.+|+.+.+++.... +.+++..-.. .+..+.+.| +. +| |
T Consensus 82 ~~~~~v~~~Pt~~~~~~g~-~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~f-f~--~~---~ 154 (350)
T 1sji_A 82 AKKLGFDEEGSLYVLKGDR-TIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGF-FK--SE---E 154 (350)
T ss_dssp HHHHTCCSTTEEEEEETTE-EEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEE-CS--CT---T
T ss_pred HHhcCCCccceEEEEECCc-EEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEE-EC--CC---C
Confidence 999999999999999 666 779999999999999999999864321 2222221111 223356666 66 55 5
Q ss_pred hhhhchHHHHHHHHHH-------------HHHHhHHhhhhhHhHhhcc
Q 021221 204 ENLLQQETYLALATAF-------------VLLRLVYIFLPTLLIFAQF 238 (316)
Q Consensus 204 ~~~l~~~~~~~lA~~f-------------~~~~~~i~~~Ptl~~~~~~ 238 (316)
... .+.|.++|..| ++.++++. +|+|.+|.++
T Consensus 155 ~~~--~~~~~~~A~~~~~~~~f~~~~~~~~~~~~~v~-~p~i~~~~~~ 199 (350)
T 1sji_A 155 SEY--YKAFEEAAEHFQPYIKFFATFDKGVAKKLSLK-MNEVDFYEPF 199 (350)
T ss_dssp SHH--HHHHHHHHHHTTTTSEEEEECCHHHHHHHTCC-TTCEEEECTT
T ss_pred cHH--HHHHHHHHHhhccCcEEEEECCHHHHHHcCCC-CCcEEEEeCC
Confidence 566 78899999987 45789998 9999999774
No 10
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.85 E-value=1.3e-21 Score=183.73 Aligned_cols=166 Identities=14% Similarity=0.180 Sum_probs=125.4
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhh------HHHHHHHHHcCC-CcEEEEEeCCCChhhH
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFR------PSFSVLSSLYSS-IPHFAIEESAIRPSIL 128 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~------p~~~~la~~~~~-~~~v~~~~~~~~~~l~ 128 (316)
...|..++.++ |++. + +.+++++|+||||||+||+... |.++++++.+.+ .+.++.+||+.++++|
T Consensus 12 ~~~v~~lt~~~--f~~~----i-~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~ 84 (367)
T 3us3_A 12 VDRVINVNAKN--YKNV----F-KKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVA 84 (367)
T ss_dssp CCCCEECCTTT--HHHH----H-HHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHH
T ss_pred CCccEECCHHH--HHHH----H-hhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHH
Confidence 44566666666 7776 3 4578999999999999974433 799999998876 4778888999999999
Q ss_pred hhcCCCccceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhCCCCCC--CcccccccCc-cccCCCccccccCCcccCChh
Q 021221 129 SKYGVHGFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTASLDKI--SPDKVGKASN-HEKHNNTEEESCPFSWARSPE 204 (316)
Q Consensus 129 ~~~~I~~~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~~~~~~--~~~~~~~~~~-~~~~~~v~f~~~~~pw~~~~~ 204 (316)
++|+|+++||+++| +|+ ...|.|.++.+.|.+|+.+++++.... +.+++..-.. .+..+++.| +. +| |.
T Consensus 85 ~~~~V~~~PTl~~f~~G~-~~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~f-f~--~~---~~ 157 (367)
T 3us3_A 85 KKLGLTEEDSIYVFKEDE-VIEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGY-FK--NK---DS 157 (367)
T ss_dssp HHHTCCSTTEEEEEETTE-EEECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEE-CS--CT---TC
T ss_pred HHcCCCcCceEEEEECCc-EEEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEE-EC--CC---Cc
Confidence 99999999999999 555 469999999999999999999865321 2222221112 223456666 66 55 45
Q ss_pred hhhchHHHHHHHHHHH-------------HHHhHHhhhhhHhHhhcc
Q 021221 205 NLLQQETYLALATAFV-------------LLRLVYIFLPTLLIFAQF 238 (316)
Q Consensus 205 ~~l~~~~~~~lA~~f~-------------~~~~~i~~~Ptl~~~~~~ 238 (316)
.. .+.|..+|..|. +.++++. .|+|.+|.++
T Consensus 158 ~~--~~~f~~~A~~~~~~~~F~~~~~~~~~~~~~v~-~p~i~lf~~~ 201 (367)
T 3us3_A 158 EH--YKAFKEAAEEFHPYIPFFATFDSKVAKKLTLK-LNEIDFYEAF 201 (367)
T ss_dssp HH--HHHHHHHHHHHTTTSCEEEECCHHHHHHHTCC-TTCEEEECTT
T ss_pred hH--HHHHHHHHHhhcCCcEEEEECCHHHHHHcCCC-CCeEEEEcCC
Confidence 66 788999999884 3678887 4999999874
No 11
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.85 E-value=5.1e-21 Score=152.24 Aligned_cols=105 Identities=21% Similarity=0.261 Sum_probs=89.7
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcC-----CCcEEEEEeCCCChhhHhh
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS-----SIPHFAIEESAIRPSILSK 130 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~-----~~~~v~~~~~~~~~~l~~~ 130 (316)
+..+..+++++ |++. +.+.+++++|+|||+||++|+.+.|.|+++++.+. +.+.+..+|++++++++++
T Consensus 14 ~~~v~~l~~~~--f~~~----~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~ 87 (127)
T 3h79_A 14 PSRVVELTDET--FDSI----VMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIER 87 (127)
T ss_dssp CCCCEECCTTT--HHHH----HTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHH
T ss_pred CCceEECChhh--HHHH----HhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHh
Confidence 45567777777 7666 45678999999999999999999999999998653 4567777899999999999
Q ss_pred cCCCccceEEEE-eCcee--EEEeCCCCHHHHHHHHHHh
Q 021221 131 YGVHGFPTLFLL-NSSMR--VRYHGSRTLDSLVAFYSDV 166 (316)
Q Consensus 131 ~~I~~~Pti~l~-~g~~~--~~~~G~~~~~~l~~fi~~~ 166 (316)
|+|+++||+++| +|+.. .+|.|.++.++|.+||+++
T Consensus 88 ~~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 88 MRVSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp TTCCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred cCCccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 999999999999 55543 6899999999999999875
No 12
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.84 E-value=1.6e-20 Score=144.98 Aligned_cols=106 Identities=12% Similarity=0.257 Sum_probs=93.2
Q ss_pred CcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCcc
Q 021221 57 DIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGF 136 (316)
Q Consensus 57 ~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~ 136 (316)
.++..++.++ |++. +.+.+++++|+||++||++|+.+.|.++++++.+++...+...+++.+++++++|+|.++
T Consensus 4 ~~v~~l~~~~--~~~~----~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~ 77 (111)
T 3gnj_A 4 MSLEKLDTNT--FEQL----IYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGV 77 (111)
T ss_dssp CCSEECCHHH--HHHH----HTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSS
T ss_pred CcceecCHHH--HHHH----HHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcC
Confidence 4455555555 6666 446789999999999999999999999999999998677777789999999999999999
Q ss_pred ceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 137 PTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 137 Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
||+++| +|+.+.++.|..+.++|.++|++.++
T Consensus 78 Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 78 PQILYFKDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp CEEEEEETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CEEEEEECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 999999 88899999999999999999998865
No 13
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.84 E-value=1.1e-20 Score=151.88 Aligned_cols=104 Identities=13% Similarity=0.133 Sum_probs=93.2
Q ss_pred ceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCC--hHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCcc
Q 021221 59 VGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWC--PFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGF 136 (316)
Q Consensus 59 v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC--~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~ 136 (316)
...++.++ |++. +.+.+++++|+|||+|| ++|+.+.|++++++++|.+...+..+|.|++++++.+|||+++
T Consensus 17 ~~~vt~~~--F~~~----v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~si 90 (137)
T 2qsi_A 17 PTLVDEAT--VDDF----IAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVC 90 (137)
T ss_dssp CEEECTTT--HHHH----HHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSS
T ss_pred CcccCHhH--HHHH----HhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccC
Confidence 34566666 7776 44555699999999999 9999999999999999998888888899999999999999999
Q ss_pred ceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 137 PTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 137 Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
||+++| +|+.+.+..|..+.++|.++|++++.
T Consensus 91 PTlilFkdG~~v~~~vG~~~k~~l~~~l~~~l~ 123 (137)
T 2qsi_A 91 PSLAVVQPERTLGVIAKIQDWSSYLAQIGAMLA 123 (137)
T ss_dssp SEEEEEECCEEEEEEESCCCHHHHHHHHHHHHH
T ss_pred CEEEEEECCEEEEEEeCCCCHHHHHHHHHHHhc
Confidence 999999 99999999999999999999998874
No 14
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.84 E-value=1.9e-20 Score=152.97 Aligned_cols=97 Identities=6% Similarity=0.079 Sum_probs=85.4
Q ss_pred HHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCcee
Q 021221 69 LQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMR 147 (316)
Q Consensus 69 ~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~ 147 (316)
|++. +..+.+++|+|+|||+|||+|+.+.|.+++++++|++.+.|..+|.|++++++++|+|.++||+++| +|+.+
T Consensus 32 f~~~---v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~siPT~~fFk~G~~v 108 (160)
T 2av4_A 32 VDQA---IVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDPVSVMFFYRNKHM 108 (160)
T ss_dssp HHHH---HHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSSEEEEEEETTEEE
T ss_pred HHHH---HHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCCCEEEEEECCEEE
Confidence 5555 3225789999999999999999999999999999998777888899999999999999999999988 88877
Q ss_pred --E-------EEeCCCC-HHHHHHHHHHhhC
Q 021221 148 --V-------RYHGSRT-LDSLVAFYSDVTA 168 (316)
Q Consensus 148 --~-------~~~G~~~-~~~l~~fi~~~~~ 168 (316)
. +..|..+ .++|.++|++++.
T Consensus 109 ~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r 139 (160)
T 2av4_A 109 MIDLGTGNNNKINWPMNNKQEFIDIVETIFR 139 (160)
T ss_dssp EEECSSSCCSCBCSCCCCHHHHHHHHHHHHH
T ss_pred EEecCCCCcCeEEeecCCHHHHHHHHHHHHH
Confidence 4 7889887 9999999998764
No 15
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.83 E-value=6.7e-20 Score=140.87 Aligned_cols=105 Identities=22% Similarity=0.365 Sum_probs=91.6
Q ss_pred cceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccc
Q 021221 58 IVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFP 137 (316)
Q Consensus 58 ~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~P 137 (316)
.+..++.++ |++. +.+++++++|+||++||++|+.+.|.++++++.+++...+...+++.+++++++|+|.++|
T Consensus 3 ~v~~l~~~~--f~~~----~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~P 76 (108)
T 2trx_A 3 KIIHLTDDS--FDTD----VLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIP 76 (108)
T ss_dssp TEEECCTTT--HHHH----TTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSS
T ss_pred cceecchhh--HHHH----HHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccC
Confidence 345556666 6655 4567899999999999999999999999999999876777777888999999999999999
Q ss_pred eEEEE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 138 TLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 138 ti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
|+++| +|+.+.++.|..+.++|.++|++.++
T Consensus 77 t~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 108 (108)
T 2trx_A 77 TLLLFKNGEVAATKVGALSKGQLKEFLDANLA 108 (108)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEEEEeCCEEEEEEecCCCHHHHHHHHHHhhC
Confidence 99999 89889999999999999999998764
No 16
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.83 E-value=1.1e-20 Score=178.18 Aligned_cols=163 Identities=18% Similarity=0.270 Sum_probs=113.3
Q ss_pred cceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcC------CCcEEEEEeCCCChhhHhhc
Q 021221 58 IVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS------SIPHFAIEESAIRPSILSKY 131 (316)
Q Consensus 58 ~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~------~~~~v~~~~~~~~~~l~~~~ 131 (316)
.+..++.++ |++. + +++++++|+||||||++|+++.|.|+++++.+. +.+.++.+||+.+.++|++|
T Consensus 6 ~v~~l~~~~--f~~~----~-~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~ 78 (382)
T 2r2j_A 6 EITSLDTEN--IDEI----L-NNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRY 78 (382)
T ss_dssp --CBCCTTT--HHHH----H-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHT
T ss_pred ceEECCHHH--HHHH----H-hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhc
Confidence 345555656 7776 2 357899999999999999999999999999883 45778888999999999999
Q ss_pred CCCccceEEEE-eCceeE-EEeCCCCHHHHHHHHHHhhCCCCCC--CcccccccCccccCCCccccccCCcccCChhhhh
Q 021221 132 GVHGFPTLFLL-NSSMRV-RYHGSRTLDSLVAFYSDVTASLDKI--SPDKVGKASNHEKHNNTEEESCPFSWARSPENLL 207 (316)
Q Consensus 132 ~I~~~Pti~l~-~g~~~~-~~~G~~~~~~l~~fi~~~~~~~~~~--~~~~~~~~~~~~~~~~v~f~~~~~pw~~~~~~~l 207 (316)
+|+++||+++| +|+.+. .|.|.++.+.|.+|+.+.+++.... +.+++.. ...+..+++.| +. .+ +...
T Consensus 79 ~v~~~Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~~~~v~f-f~--~~---~~~~- 150 (382)
T 2r2j_A 79 RISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSKRNIIGY-FE--QK---DSDN- 150 (382)
T ss_dssp TCCEESEEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC-------------CCEEEEE-ES--CS---SSHH-
T ss_pred CCCcCCEEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCCCEEEEE-EC--CC---CChh-
Confidence 99999999999 777766 5999999999999999999864321 1122222 22333456666 55 33 3334
Q ss_pred chHHHHHHHHHHH------------HHHhHHhhhhhHhHhhc
Q 021221 208 QQETYLALATAFV------------LLRLVYIFLPTLLIFAQ 237 (316)
Q Consensus 208 ~~~~~~~lA~~f~------------~~~~~i~~~Ptl~~~~~ 237 (316)
.+.|..+|..|. ..++++.++| +++++.
T Consensus 151 -~~~f~~~A~~~~~~~~F~~~~~~~~~~~~v~~~p-i~~~~~ 190 (382)
T 2r2j_A 151 -YRVFERVANILHDDCAFLSAFGDVSKPERYSGDN-IIYKPP 190 (382)
T ss_dssp -HHHHHHHHHHHTTTCEEEEEESCC--------CE-EEEECS
T ss_pred -HHHHHHHHHHhhccceEEEEehhhHHhhCCCCCc-eEECCC
Confidence 567899998883 2567788899 766664
No 17
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.83 E-value=7.4e-20 Score=140.45 Aligned_cols=104 Identities=19% Similarity=0.332 Sum_probs=92.2
Q ss_pred CcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCcc
Q 021221 57 DIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGF 136 (316)
Q Consensus 57 ~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~ 136 (316)
..+..++.++ |+++ + .++++++|+||++||++|+.+.|.++++++.+++...+...+++.+++++++|+|.++
T Consensus 4 ~~v~~l~~~~--~~~~----~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~ 76 (109)
T 3tco_A 4 DVTLVLTEEN--FDEV----I-RNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNI 76 (109)
T ss_dssp CCCEECCTTT--HHHH----H-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSS
T ss_pred CeEEEecHHH--HHHH----H-hcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccC
Confidence 3455666666 7776 2 3589999999999999999999999999999997777777889999999999999999
Q ss_pred ceEEEE-eCceeEEEeCCCCHHHHHHHHHHhh
Q 021221 137 PTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 137 Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~ 167 (316)
||+++| +|+.+.++.|..+.++|.++|++++
T Consensus 77 Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 77 PTTLIFVNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred CEEEEEcCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 999999 8999999999999999999999875
No 18
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.82 E-value=8.5e-20 Score=143.53 Aligned_cols=106 Identities=21% Similarity=0.322 Sum_probs=90.9
Q ss_pred CcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCcc
Q 021221 57 DIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGF 136 (316)
Q Consensus 57 ~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~ 136 (316)
.++..++.++ |++. +.+.+++++|+||++||++|+.+.|.++++++.+.+.+.+...+++.+++++++|+|.++
T Consensus 13 ~~~~~~~~~~--f~~~----v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~ 86 (119)
T 1w4v_A 13 TTFNIQDGPD--FQDR----VVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAV 86 (119)
T ss_dssp SEEECCSHHH--HHHH----TTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSS
T ss_pred eEEEecChhh--HHHH----HHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcc
Confidence 3344444444 6665 456789999999999999999999999999999977677777788899999999999999
Q ss_pred ceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 137 PTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 137 Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
||+++| +|+.+.++.|..+.++|.++|++.++
T Consensus 87 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 119 (119)
T 1w4v_A 87 PTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLIG 119 (119)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred cEEEEEeCCcEEEEEcCCCCHHHHHHHHHHHhC
Confidence 999999 88888999999999999999998764
No 19
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.82 E-value=1.7e-19 Score=139.67 Aligned_cols=106 Identities=22% Similarity=0.360 Sum_probs=92.7
Q ss_pred CcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCcc
Q 021221 57 DIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGF 136 (316)
Q Consensus 57 ~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~ 136 (316)
+.+..++.++ |++. +.+++++++|+||++||++|+.+.|.++++++.+++...+...+++.+++++++|+|.++
T Consensus 5 ~~v~~l~~~~--~~~~----~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 78 (112)
T 1t00_A 5 GTLKHVTDDS--FEQD----VLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSI 78 (112)
T ss_dssp CCCEEECTTT--HHHH----TTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSS
T ss_pred ceEEecchhh--HHHH----HhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcc
Confidence 4456677777 6655 456789999999999999999999999999999977677777788899999999999999
Q ss_pred ceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 137 PTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 137 Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
||+++| +|+.+.++.|..+.++|.++|++.+.
T Consensus 79 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 79 PTLNVYQGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred cEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 999999 88888999999999999999998764
No 20
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.82 E-value=1.7e-19 Score=137.80 Aligned_cols=102 Identities=17% Similarity=0.233 Sum_probs=90.2
Q ss_pred cceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccc
Q 021221 58 IVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFP 137 (316)
Q Consensus 58 ~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~P 137 (316)
++..++.++ |++. + ++++++|+||++||++|+.+.|.++++++.+++...+...+++.+++++++|+|+++|
T Consensus 4 ~v~~l~~~~--~~~~----~--~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~P 75 (106)
T 3die_A 4 AIVKVTDAD--FDSK----V--ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIP 75 (106)
T ss_dssp CCEECCTTT--HHHH----S--CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSBS
T ss_pred ceEECCHHH--HHHH----h--cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcccC
Confidence 345555555 7777 3 7899999999999999999999999999999987777777899999999999999999
Q ss_pred eEEEE-eCceeEEEeCCCCHHHHHHHHHHhh
Q 021221 138 TLFLL-NSSMRVRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 138 ti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~ 167 (316)
|+++| +|+.+.++.|..+.++|.++|++++
T Consensus 76 t~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 76 TLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred EEEEEeCCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 99999 8989999999999999999998753
No 21
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.82 E-value=1.3e-19 Score=140.92 Aligned_cols=103 Identities=18% Similarity=0.256 Sum_probs=90.9
Q ss_pred eEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceE
Q 021221 60 GVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTL 139 (316)
Q Consensus 60 ~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti 139 (316)
..++.++ |++. + .+++++|+||++||++|+.+.|.++++++.+++...+...|++.+++++++|+|.++||+
T Consensus 4 ~~l~~~~--~~~~----~--~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 75 (112)
T 2voc_A 4 VKATDQS--FSAE----T--SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTL 75 (112)
T ss_dssp EECCTTT--HHHH----H--SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBSEE
T ss_pred EEecHHH--HHHH----h--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcccEE
Confidence 3445555 7776 3 789999999999999999999999999999987667777788899999999999999999
Q ss_pred EEE-eCceeEEEeCCCCHHHHHHHHHHhhCCC
Q 021221 140 FLL-NSSMRVRYHGSRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 140 ~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~~~ 170 (316)
++| +|+.+.++.|..+.++|.+|+++++++.
T Consensus 76 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 76 LVLKDGEVVETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHTTSCSC
T ss_pred EEEeCCEEEEEEeCCCCHHHHHHHHHHHHHhh
Confidence 999 8999999999999999999999988853
No 22
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.82 E-value=1.3e-19 Score=146.12 Aligned_cols=109 Identities=26% Similarity=0.437 Sum_probs=93.5
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCC---cEEEEEeCCCChhhHhhcC
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI---PHFAIEESAIRPSILSKYG 132 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~---~~v~~~~~~~~~~l~~~~~ 132 (316)
...+..++.++ |++. + ..+++++|+||++||++|+++.|.|+++++.+++. +.+..+|++.+.+++++|+
T Consensus 16 ~~~v~~l~~~~--~~~~----~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~ 88 (140)
T 2dj1_A 16 ENGVWVLNDGN--FDNF----V-ADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFD 88 (140)
T ss_dssp ETTEEECCTTT--HHHH----H-TTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTT
T ss_pred CCCCEEcChHh--HHHH----H-hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCC
Confidence 34566666666 7776 2 46799999999999999999999999999998764 6777778989999999999
Q ss_pred CCccceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhCCCCC
Q 021221 133 VHGFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTASLDK 172 (316)
Q Consensus 133 I~~~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~~~~~ 172 (316)
|.++||+++| +|+ +.+|.|.++.++|.+||+++++....
T Consensus 89 v~~~Pt~~~~~~G~-~~~~~g~~~~~~l~~~l~~~~~~~~~ 128 (140)
T 2dj1_A 89 VSGYPTIKILKKGQ-AVDYDGSRTQEEIVAKVREVSQPDWT 128 (140)
T ss_dssp CCSSSEEEEEETTE-EEECCSCCCHHHHHHHHHHHHSSSCC
T ss_pred CCccCeEEEEECCc-EEEcCCCCCHHHHHHHHHHhcCCCCC
Confidence 9999999999 777 88999999999999999999986543
No 23
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.82 E-value=1.6e-19 Score=144.24 Aligned_cols=106 Identities=23% Similarity=0.380 Sum_probs=93.0
Q ss_pred CcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCcc
Q 021221 57 DIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGF 136 (316)
Q Consensus 57 ~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~ 136 (316)
..+..++.++ |++. +.+.+++++|+||++||++|+.+.|.++++++.+++.+.+..+|++.+++++++|+|.++
T Consensus 22 ~~v~~l~~~~--f~~~----~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~ 95 (128)
T 2o8v_B 22 DKIIHLTDDS--FDTD----VLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGI 95 (128)
T ss_dssp CCSEEECTTT--HHHH----TTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSS
T ss_pred cccEecChhh--HHHH----HHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCcc
Confidence 3466677766 6655 456789999999999999999999999999999987677777788899999999999999
Q ss_pred ceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 137 PTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 137 Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
||+++| +|+.+.++.|..+.++|.++|++.++
T Consensus 96 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 96 PTLLLFKNGEVAATKVGALSKGQLKEFLDANLA 128 (128)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred CEEEEEeCCEEEEEEcCCCCHHHHHHHHHHhhC
Confidence 999999 88889999999999999999998764
No 24
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.82 E-value=1.7e-19 Score=143.49 Aligned_cols=107 Identities=21% Similarity=0.369 Sum_probs=93.6
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCc
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHG 135 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~ 135 (316)
...+..++.++ |++. +.+.+++++|+||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|++
T Consensus 16 ~~~v~~l~~~~--f~~~----~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~ 89 (130)
T 2dml_A 16 SDDVIELTPSN--FNRE----VIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQG 89 (130)
T ss_dssp TSSSEECCTTT--HHHH----TTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCS
T ss_pred CCCcEECCHHH--HHHH----HhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCc
Confidence 45566777766 6665 45678999999999999999999999999999998877788889999999999999999
Q ss_pred cceEEEE-eCce-eEEEeCCCCHHHHHHHHHHhhC
Q 021221 136 FPTLFLL-NSSM-RVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 136 ~Pti~l~-~g~~-~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
+||+++| +|+. +.++.|.++.++|.+|+.+.+.
T Consensus 90 ~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 90 FPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp SSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred cCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 9999999 5555 8899999999999999998875
No 25
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.82 E-value=2.5e-19 Score=146.15 Aligned_cols=107 Identities=17% Similarity=0.324 Sum_probs=94.8
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCc
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHG 135 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~ 135 (316)
...+..++.++ |++. + ..+++++|+||++||++|+.+.|.|+++++.+.+...+..+|++.+++++++|+|.+
T Consensus 37 ~~~v~~l~~~~--~~~~----~-~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~ 109 (148)
T 3p2a_A 37 DGEVINATAET--LDKL----L-QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRS 109 (148)
T ss_dssp CCCCEECCTTT--HHHH----T-TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCS
T ss_pred cCCceecCHHH--HHHH----H-hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCCc
Confidence 44556666666 7776 3 688999999999999999999999999999997767777778999999999999999
Q ss_pred cceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhCC
Q 021221 136 FPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTAS 169 (316)
Q Consensus 136 ~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~~ 169 (316)
+||+++| +|+.+.++.|..+.++|.+||++.++.
T Consensus 110 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 110 IPTIMLYRNGKMIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp SSEEEEEETTEEEEEESSCCCHHHHHHHHHHHHHS
T ss_pred cCEEEEEECCeEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 9999999 899999999999999999999998874
No 26
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.82 E-value=1.9e-19 Score=138.09 Aligned_cols=103 Identities=19% Similarity=0.337 Sum_probs=89.4
Q ss_pred ceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccce
Q 021221 59 VGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPT 138 (316)
Q Consensus 59 v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pt 138 (316)
+..++.++ |++. +.+++++++|+||++||++|+.+.|.++++++.+++...+...+++.+++++++|+|.++||
T Consensus 3 v~~l~~~~--~~~~----~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt 76 (107)
T 1dby_A 3 AGAVNDDT--FKNV----VLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPT 76 (107)
T ss_dssp CEEECHHH--HHHH----TTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSCE
T ss_pred cEeccHHH--HHHH----HhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCCE
Confidence 34445545 5554 45678999999999999999999999999999998766677778889999999999999999
Q ss_pred EEEE-eCceeEEEeCCCCHHHHHHHHHHhh
Q 021221 139 LFLL-NSSMRVRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 139 i~l~-~g~~~~~~~G~~~~~~l~~fi~~~~ 167 (316)
++++ +|+.+.++.|..+.++|.++|++.+
T Consensus 77 ~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 77 IMVFKGGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp EEEESSSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEEEeCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9999 8999999999999999999999875
No 27
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=1.2e-19 Score=144.70 Aligned_cols=107 Identities=25% Similarity=0.469 Sum_probs=93.1
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcC----CCcEEEEEeCCCChhhHhhc
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS----SIPHFAIEESAIRPSILSKY 131 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~----~~~~v~~~~~~~~~~l~~~~ 131 (316)
...+..++.++ |++. +.+.+++++|+||++||++|+.+.|.++++++.++ +...+..+|++.+++++++|
T Consensus 6 ~~~v~~l~~~~--~~~~----~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~ 79 (133)
T 1x5d_A 6 SGDVIELTDDS--FDKN----VLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRY 79 (133)
T ss_dssp CCSCEECCTTH--HHHH----TTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHH
T ss_pred CCcCEEcCHhh--HHHH----HhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhC
Confidence 44566666666 6665 45678999999999999999999999999999986 55677777898999999999
Q ss_pred CCCccceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 132 GVHGFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 132 ~I~~~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
+|.++||+++| +|+.+.+|.|.++.++|.+|+++.+.
T Consensus 80 ~v~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 80 GIRGFPTIKIFQKGESPVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp TCCSSSEEEEEETTEEEEEECSCCSHHHHHHHHHHHHH
T ss_pred CCCeeCeEEEEeCCCceEEecCCCCHHHHHHHHHHHhh
Confidence 99999999999 78888999999999999999999886
No 28
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.82 E-value=2.4e-19 Score=137.25 Aligned_cols=103 Identities=17% Similarity=0.283 Sum_probs=90.3
Q ss_pred cceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccc
Q 021221 58 IVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFP 137 (316)
Q Consensus 58 ~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~P 137 (316)
++..++.++ |++. +.+.+++++|+||++||++|+.+.|.++++++.+++...+...+++.+++++++|+|.++|
T Consensus 3 ~v~~l~~~~--~~~~----~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~P 76 (107)
T 2i4a_A 3 HTLAVSDSS--FDQD----VLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIP 76 (107)
T ss_dssp CEEECCTTT--HHHH----TTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSS
T ss_pred ceeecchhh--hhHH----HHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccC
Confidence 345556666 6665 4567899999999999999999999999999999876677777888999999999999999
Q ss_pred eEEEE-eCceeEEEeCCCCHHHHHHHHHHh
Q 021221 138 TLFLL-NSSMRVRYHGSRTLDSLVAFYSDV 166 (316)
Q Consensus 138 ti~l~-~g~~~~~~~G~~~~~~l~~fi~~~ 166 (316)
|+++| +|+.+.++.|..+.++|.++|+++
T Consensus 77 t~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 77 TLMLVRDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred EEEEEeCCEEEEEecCCCCHHHHHHHHHhc
Confidence 99999 899899999999999999999875
No 29
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.82 E-value=8.2e-20 Score=143.15 Aligned_cols=94 Identities=26% Similarity=0.389 Sum_probs=83.3
Q ss_pred HHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCcee
Q 021221 69 LQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMR 147 (316)
Q Consensus 69 ~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~ 147 (316)
|++++. ..++++++|+|||+||++|+.+.|.++++++.|++ +.+..+|++++++++++|+|.++||+++| +|+.+
T Consensus 22 f~~~l~---~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~ 97 (116)
T 3qfa_C 22 FQEALD---AAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKSMPTFQFFKKGQKV 97 (116)
T ss_dssp HHHHHH---HHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHHHHHHTTCCSSSEEEEESSSSEE
T ss_pred HHHHHH---hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCccccEEEEEeCCeEE
Confidence 666622 12789999999999999999999999999999988 56666688899999999999999999999 89999
Q ss_pred EEEeCCCCHHHHHHHHHHhh
Q 021221 148 VRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 148 ~~~~G~~~~~~l~~fi~~~~ 167 (316)
.++.|. +.++|.++|++++
T Consensus 98 ~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 98 GEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp EEEESC-CHHHHHHHHHHHC
T ss_pred EEEcCC-CHHHHHHHHHHhC
Confidence 999999 9999999998763
No 30
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.82 E-value=1.7e-19 Score=146.13 Aligned_cols=106 Identities=24% Similarity=0.328 Sum_probs=93.5
Q ss_pred CcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCcc
Q 021221 57 DIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGF 136 (316)
Q Consensus 57 ~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~ 136 (316)
..+..++.++ |++. +.+.+++++|+||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++
T Consensus 6 ~~v~~l~~~~--f~~~----~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~ 79 (140)
T 3hz4_A 6 SSIIEFEDMT--WSQQ----VEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGT 79 (140)
T ss_dssp TTEEEECHHH--HHHH----TTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEE
T ss_pred cceEEcchHh--HHHH----HHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcC
Confidence 3455666555 6644 456789999999999999999999999999999998777777789999999999999999
Q ss_pred ceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 137 PTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 137 Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
||+++| +|+.+.++.|..+.++|.++|++.++
T Consensus 80 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 112 (140)
T 3hz4_A 80 PTFKFFCHGRPVWEQVGQIYPSILKNAVRDMLQ 112 (140)
T ss_dssp SEEEEEETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CEEEEEeCCcEEEEEcCCCCHHHHHHHHHHHhc
Confidence 999999 89999999999999999999999886
No 31
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.81 E-value=2.9e-20 Score=149.89 Aligned_cols=103 Identities=14% Similarity=0.156 Sum_probs=91.6
Q ss_pred eEEeCCcccHHHHHhHHhccCCCeEEEEEEcCC--ChHHHhhhHHHHHHHHHcCCC-cEEEEEeCCCChhhHhhcCCCcc
Q 021221 60 GVIEGDEVSLQMALNMVHKNSHEYVAVLFYASW--CPFSRNFRPSFSVLSSLYSSI-PHFAIEESAIRPSILSKYGVHGF 136 (316)
Q Consensus 60 ~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~W--C~~Ck~~~p~~~~la~~~~~~-~~v~~~~~~~~~~l~~~~~I~~~ 136 (316)
..++.++ |++. + ..+++++|+|||+| ||+|+.+.|++++++++|++. +.+..+|.|++++++.+|||+++
T Consensus 20 ~~~t~~~--F~~~----v-~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sI 92 (140)
T 2qgv_A 20 TPVSESR--LDDW----L-TQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRF 92 (140)
T ss_dssp EECCHHH--HHHH----H-HTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSS
T ss_pred ccCCHHH--HHHH----H-hCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccC
Confidence 3444444 7776 3 36789999999999 999999999999999999988 88999999999999999999999
Q ss_pred ceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhCC
Q 021221 137 PTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTAS 169 (316)
Q Consensus 137 Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~~ 169 (316)
||+++| +|+.+.+..|..+.++|.++|++.+..
T Consensus 93 PTlilFk~G~~v~~~~G~~~k~~l~~~i~~~l~~ 126 (140)
T 2qgv_A 93 PATLVFTGGNYRGVLNGIHPWAELINLMRGLVEP 126 (140)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred CEEEEEECCEEEEEEecCCCHHHHHHHHHHHhcC
Confidence 999999 999999999999999999999998863
No 32
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.81 E-value=2.2e-19 Score=137.28 Aligned_cols=101 Identities=23% Similarity=0.321 Sum_probs=88.3
Q ss_pred eEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceE
Q 021221 60 GVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTL 139 (316)
Q Consensus 60 ~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti 139 (316)
..++.++ |++. .+++++++|+||++||++|+.+.|.++++++.+++...+...+++.+++++++|+|.++||+
T Consensus 3 ~~l~~~~--~~~~-----~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~ 75 (105)
T 1nsw_A 3 MTLTDAN--FQQA-----IQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTL 75 (105)
T ss_dssp EEECTTT--HHHH-----HSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred eeccHHh--HHHH-----HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccccEE
Confidence 3455556 6654 35679999999999999999999999999999987667777788899999999999999999
Q ss_pred EEE-eCceeEEEeCCCCHHHHHHHHHHhh
Q 021221 140 FLL-NSSMRVRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 140 ~l~-~g~~~~~~~G~~~~~~l~~fi~~~~ 167 (316)
++| +|+.+.++.|..+.++|.+++++.+
T Consensus 76 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 76 ILFKGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred EEEeCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 999 8888899999999999999998764
No 33
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.81 E-value=2.2e-19 Score=148.21 Aligned_cols=104 Identities=22% Similarity=0.385 Sum_probs=91.7
Q ss_pred EEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEE
Q 021221 61 VIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLF 140 (316)
Q Consensus 61 ~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~ 140 (316)
+++.+..+|++. + +++++++|+||++||++|+.+.|.|+++++.|++.+.+..+|++.+++++++|+|+++||++
T Consensus 49 ~~~l~~~~f~~~----~-~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 123 (155)
T 2ppt_A 49 VAGIDPAILARA----E-RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFI 123 (155)
T ss_dssp EEECCHHHHHHH----T-TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCCSSSEEE
T ss_pred CccCCHHHHHHH----H-hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCCcCCEEE
Confidence 445555557666 3 67899999999999999999999999999999876777777899999999999999999999
Q ss_pred EE-eCceeEEEeCCCCHHHHHHHHHHhhCC
Q 021221 141 LL-NSSMRVRYHGSRTLDSLVAFYSDVTAS 169 (316)
Q Consensus 141 l~-~g~~~~~~~G~~~~~~l~~fi~~~~~~ 169 (316)
+| +|+.+.++.|..+.++|.+||++.++.
T Consensus 124 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 124 LFHKGRELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEeCCeEEEEecCCCCHHHHHHHHHHHhcc
Confidence 99 899999999999999999999998874
No 34
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.81 E-value=3.4e-19 Score=138.18 Aligned_cols=105 Identities=25% Similarity=0.358 Sum_probs=92.6
Q ss_pred cceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccc
Q 021221 58 IVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFP 137 (316)
Q Consensus 58 ~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~P 137 (316)
.+..++.++ |++. +.+.+++++|+||++||++|+.+.|.++++++.+++...+...+++.+++++++|+|.++|
T Consensus 8 ~v~~l~~~~--~~~~----~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~P 81 (115)
T 1thx_A 8 GVITITDAE--FESE----VLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVP 81 (115)
T ss_dssp SEEECCGGG--HHHH----TTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSSS
T ss_pred ceEEeeccc--hhhH----hhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCcee
Confidence 355555555 6665 4567899999999999999999999999999999876777777888999999999999999
Q ss_pred eEEEE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 138 TLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 138 ti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
|+++| +|+.+.++.|..+.++|.++|++.++
T Consensus 82 t~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 82 ALRLVKGEQILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEEEEcCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 99999 88888999999999999999999876
No 35
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.81 E-value=3.9e-19 Score=137.59 Aligned_cols=95 Identities=21% Similarity=0.326 Sum_probs=82.8
Q ss_pred cccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eC
Q 021221 66 EVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NS 144 (316)
Q Consensus 66 ~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g 144 (316)
..+|+++ ..++++++|+|||+||++|+.+.|.++++++.+++ ..+..++++.+++++++|+|.++||+++| +|
T Consensus 14 ~~~f~~~-----~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 87 (109)
T 3f3q_A 14 ASEFDSA-----IAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDELGDVAQKNEVSAMPTLLLFKNG 87 (109)
T ss_dssp HHHHHHH-----TTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred HHHHHHH-----HhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCCccCEEEEEECC
Confidence 3346666 35689999999999999999999999999999988 44555578899999999999999999999 88
Q ss_pred ceeEEEeCCCCHHHHHHHHHHhh
Q 021221 145 SMRVRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 145 ~~~~~~~G~~~~~~l~~fi~~~~ 167 (316)
+.+.++.|. +.++|.++|++++
T Consensus 88 ~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 88 KEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp EEEEEEESS-CHHHHHHHHHHHC
T ss_pred EEEEEEeCC-CHHHHHHHHHhhC
Confidence 899999999 7799999998763
No 36
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.81 E-value=7.1e-19 Score=136.13 Aligned_cols=104 Identities=17% Similarity=0.333 Sum_probs=87.4
Q ss_pred CCcceEEeCCcccHHHHHhHHhcc-CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCC-CChhhHhhcCC
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKN-SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA-IRPSILSKYGV 133 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~-~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~-~~~~l~~~~~I 133 (316)
.+.+..++.++ |++. +.+ .+++++|+||++||++|+.+.|.++++++.++++.++.+ |++ .+++++++|+|
T Consensus 4 ~~~v~~l~~~~--~~~~----~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~~v-d~~~~~~~~~~~~~v 76 (111)
T 2pu9_C 4 VGKVTEVNKDT--FWPI----VKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLDVIFLKL-DCNQENKTLAKELGI 76 (111)
T ss_dssp TTSEEEECTTT--HHHH----HTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEE-ECSSTTHHHHHHHCC
T ss_pred cCccEEechHH--HHHH----HHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCCeEEEEE-ecCcchHHHHHHcCC
Confidence 45566777766 7776 332 689999999999999999999999999999988555554 555 78999999999
Q ss_pred CccceEEEE-eCceeEEEeCCCCHHHHHHHHHHhh
Q 021221 134 HGFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 134 ~~~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~ 167 (316)
+++||++++ +|+.+.++.|.. .++|.++|++..
T Consensus 77 ~~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~~ 110 (111)
T 2pu9_C 77 RVVPTFKILKENSVVGEVTGAK-YDKLLEAIQAAR 110 (111)
T ss_dssp SBSSEEEEESSSSEEEEEESSC-HHHHHHHHHHHH
T ss_pred CeeeEEEEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 999998888 899888999984 999999998865
No 37
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.81 E-value=1.3e-19 Score=175.52 Aligned_cols=162 Identities=18% Similarity=0.290 Sum_probs=123.2
Q ss_pred ceEEeCCcccHHHHHhHHhccCC---CeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCc
Q 021221 59 VGVIEGDEVSLQMALNMVHKNSH---EYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHG 135 (316)
Q Consensus 59 v~~l~~~~~~~~~~~~~i~~~~~---~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~ 135 (316)
|..++.++ |++. + ..+ ++++|+||||||++|+++.|.|+++++.+++.+.++.+||+.++++|++|||++
T Consensus 3 v~~l~~~~--f~~~----i-~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~ 75 (481)
T 3f8u_A 3 VLELTDDN--FESR----I-SDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSG 75 (481)
T ss_dssp CEEECTTT--HHHH----T-TCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCE
T ss_pred eEEecHHH--HHHH----H-HhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCC
Confidence 45566666 7776 3 344 899999999999999999999999999999877788889999999999999999
Q ss_pred cceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhCCCCCC--CcccccccCccccCCCccccccCCcccCChhhhhchHHH
Q 021221 136 FPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTASLDKI--SPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETY 212 (316)
Q Consensus 136 ~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~~~~~~--~~~~~~~~~~~~~~~~v~f~~~~~pw~~~~~~~l~~~~~ 212 (316)
+||+++| +|+.+.+|.|.++.+.|.+|+.+.+++.... +.+++..-...+....+.| +. ..|... .+.|
T Consensus 76 ~Ptl~~~~~g~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~vv~~-~~-----~~~~~~--~~~f 147 (481)
T 3f8u_A 76 YPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGF-FD-----DSFSEA--HSEF 147 (481)
T ss_dssp ESEEEEEETTEEEEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTTSSSCEEEEE-ES-----CTTCHH--HHHH
T ss_pred CCEEEEEeCCceeeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHHhcCCcEEEEE-EC-----CCccch--HHHH
Confidence 9999999 7888999999999999999999999865321 2222222122233344545 43 345666 7789
Q ss_pred HHHHHHHH-------------HHHhHHhhhhhHhHhh
Q 021221 213 LALATAFV-------------LLRLVYIFLPTLLIFA 236 (316)
Q Consensus 213 ~~lA~~f~-------------~~~~~i~~~Ptl~~~~ 236 (316)
..+|..+. ..++++...| +.+|.
T Consensus 148 ~~~a~~~~~~~~F~~~~~~~~~~~~~v~~~~-i~~~~ 183 (481)
T 3f8u_A 148 LKAASNLRDNYRFAHTNVESLVNEYDDNGEG-IILFR 183 (481)
T ss_dssp HHHHHHHTTTSCEEEECCHHHHHHHCSSSEE-EEEEC
T ss_pred HHHHHHhccCceEEEECCHHHHHHhCCCCCc-EEEEe
Confidence 99998873 3677777666 44443
No 38
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.80 E-value=6.2e-19 Score=134.48 Aligned_cols=102 Identities=19% Similarity=0.273 Sum_probs=88.8
Q ss_pred eEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceE
Q 021221 60 GVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTL 139 (316)
Q Consensus 60 ~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti 139 (316)
..++.++ |++. +.+++++++|+||++||++|+.+.|.++++++.+++...+...+++.+++++++|+|.++||+
T Consensus 3 ~~~~~~~--~~~~----~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 76 (105)
T 1fb6_A 3 QDVNDSS--WKEF----VLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTV 76 (105)
T ss_dssp EECCTTT--HHHH----TTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred eechhhh--HHHH----HhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccEE
Confidence 3455555 6665 456789999999999999999999999999999987667777788889999999999999999
Q ss_pred EEE-eCceeEEEeCCCCHHHHHHHHHHhh
Q 021221 140 FLL-NSSMRVRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 140 ~l~-~g~~~~~~~G~~~~~~l~~fi~~~~ 167 (316)
+++ +|+.+.++.|..+.++|.++|++.+
T Consensus 77 ~~~~~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 77 LFFKNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp EEEETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred EEEeCCeEEEEEecCCCHHHHHHHHHhhC
Confidence 999 8888899999999999999998753
No 39
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.80 E-value=5e-19 Score=134.34 Aligned_cols=100 Identities=21% Similarity=0.366 Sum_probs=88.4
Q ss_pred EEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEE
Q 021221 61 VIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLF 140 (316)
Q Consensus 61 ~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~ 140 (316)
.++.++ |++. + +++++++|+||++||++|+.+.|.++++++.+++ ..+...+++.+++++++|+|.++||++
T Consensus 3 ~l~~~~--~~~~----~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 74 (104)
T 2e0q_A 3 HLDSKN--FDSF----L-ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPDIAARYGVMSLPTVI 74 (104)
T ss_dssp ECCTTT--HHHH----H-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSCEEE
T ss_pred ecCHHH--HHHH----H-hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHHHHHhCCccccCEEE
Confidence 344555 7776 2 4678999999999999999999999999999988 666777888999999999999999999
Q ss_pred EE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 141 LL-NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 141 l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
+| +|+.+.++.|..+.++|.+++++.++
T Consensus 75 ~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 75 FFKDGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred EEECCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 99 88888999999999999999998875
No 40
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.80 E-value=5.2e-19 Score=136.26 Aligned_cols=102 Identities=26% Similarity=0.417 Sum_probs=87.9
Q ss_pred CcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC---CcEEEEEeCCCChhhHhhcCC
Q 021221 57 DIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS---IPHFAIEESAIRPSILSKYGV 133 (316)
Q Consensus 57 ~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~---~~~v~~~~~~~~~~l~~~~~I 133 (316)
..+..++.++ |++. +. +++++|+||++||++|+.+.|.++++++.+.. ...+...|++.+++++++|+|
T Consensus 5 ~~v~~l~~~~--~~~~----~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v 76 (111)
T 3uvt_A 5 STVLALTENN--FDDT----IA--EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSV 76 (111)
T ss_dssp CCSEECCTTT--HHHH----HH--SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTC
T ss_pred CcceEcChhh--HHHH----hc--CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCC
Confidence 3455666666 7777 32 68999999999999999999999999998752 456666788899999999999
Q ss_pred CccceEEEE-eCceeEEEeCCCCHHHHHHHHHHh
Q 021221 134 HGFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDV 166 (316)
Q Consensus 134 ~~~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~ 166 (316)
.++||+++| +|+.+.++.|..+.++|.+||+++
T Consensus 77 ~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 77 RGYPTLLLFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp CSSSEEEEEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred CcccEEEEEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 999999999 898999999999999999999875
No 41
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.80 E-value=1e-19 Score=139.66 Aligned_cols=88 Identities=15% Similarity=0.103 Sum_probs=71.1
Q ss_pred cCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCceeEEEeCCCCHH
Q 021221 79 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLD 157 (316)
Q Consensus 79 ~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~~~~~G~~~~~ 157 (316)
+++++++|+|||+||++|+.+.|.++++++.|++ ..+..+|++.+++++++|+|.++||+++| +|+.+.++.|..+.+
T Consensus 16 ~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~ 94 (105)
T 4euy_A 16 EEQQLVLLFIKTENCGVCDVMLRKVNYVLENYNY-VEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKEILRESRFISLE 94 (105)
T ss_dssp TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCTT-EEEEEEEECCC---------CCCCEEEEEETTEEEEEEESSCCHH
T ss_pred hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcCC-ceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeEEEEEeCCcCHH
Confidence 5789999999999999999999999999999975 45555577889999999999999999999 899999999999999
Q ss_pred HHHHHHHHhh
Q 021221 158 SLVAFYSDVT 167 (316)
Q Consensus 158 ~l~~fi~~~~ 167 (316)
+|.+++++++
T Consensus 95 ~l~~~l~~~~ 104 (105)
T 4euy_A 95 NLERTIQLFE 104 (105)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 42
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.80 E-value=4e-19 Score=143.44 Aligned_cols=89 Identities=19% Similarity=0.353 Sum_probs=81.2
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCceeEEEeCCCCHHH
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDS 158 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~~~~~G~~~~~~ 158 (316)
.+++++|+||++||++|+.+.|.++++++.|++.+.+..++++.+++++++|+|.++||+++| .++.+.++.|..+.++
T Consensus 50 ~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~~g~~~~~~G~~~~~~ 129 (141)
T 3hxs_A 50 GDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDFGIQSIPTIWFVPMKGEPQVNMGALSKEQ 129 (141)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEECSSSCCEEEESCCCHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHHHHcCCCCcCEEEEEeCCCCEEEEeCCCCHHH
Confidence 479999999999999999999999999999997777777789999999999999999999999 5555569999999999
Q ss_pred HHHHHHHhhC
Q 021221 159 LVAFYSDVTA 168 (316)
Q Consensus 159 l~~fi~~~~~ 168 (316)
|.++|++++.
T Consensus 130 l~~~l~~~l~ 139 (141)
T 3hxs_A 130 LKGYIDKVLL 139 (141)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHHc
Confidence 9999998875
No 43
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.80 E-value=5.1e-19 Score=135.57 Aligned_cols=103 Identities=18% Similarity=0.261 Sum_probs=89.4
Q ss_pred ceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccce
Q 021221 59 VGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPT 138 (316)
Q Consensus 59 v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pt 138 (316)
+..++.++ |+++ .+.+++++|+||++||++|+.+.|.++++++.+++...+...+++.+++++++|+|.++||
T Consensus 3 v~~l~~~~--~~~~-----~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt 75 (109)
T 2yzu_A 3 PIEVTDQN--FDET-----LGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIPT 75 (109)
T ss_dssp CEECCTTT--HHHH-----HHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred ceEccHhH--HHHH-----hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCCE
Confidence 34555556 6655 2467899999999999999999999999999998766777778889999999999999999
Q ss_pred EEEE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 139 LFLL-NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 139 i~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
+++| +|+.+.++.|..+.++|.+++++.++
T Consensus 76 ~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 76 VILFKDGQPVEVLVGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHTTC-
T ss_pred EEEEeCCcEeeeEeCCCCHHHHHHHHHHHhh
Confidence 9999 88888899999999999999998876
No 44
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.79 E-value=6.2e-19 Score=138.20 Aligned_cols=107 Identities=20% Similarity=0.282 Sum_probs=92.2
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCc
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHG 135 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~ 135 (316)
..++..++.++ |++. +.+.+++++|+||++||++|+.+.|.++++++.+++...+..++++.+++++++|+|.+
T Consensus 11 ~~~v~~l~~~~--~~~~----~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~ 84 (121)
T 2i1u_A 11 KSATIKVTDAS--FATD----VLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVS 84 (121)
T ss_dssp -CCSEECCTTT--HHHH----TTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCS
T ss_pred cccceecCHHH--HHHH----HHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCc
Confidence 34456666666 6654 45678999999999999999999999999999998767777778889999999999999
Q ss_pred cceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 136 FPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 136 ~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
+||+++| +|+.+.++.|..+.++|.++|++.++
T Consensus 85 ~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 85 IPTLILFKDGQPVKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp SSEEEEEETTEEEEEEESCCCHHHHHHHTCSCCC
T ss_pred CCEEEEEECCEEEEEecCCCCHHHHHHHHHHHHh
Confidence 9999999 88888999999999999999987765
No 45
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.79 E-value=1.2e-18 Score=133.86 Aligned_cols=95 Identities=18% Similarity=0.200 Sum_probs=81.0
Q ss_pred HHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCcee
Q 021221 69 LQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMR 147 (316)
Q Consensus 69 ~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~ 147 (316)
|++.+ ...++++++|+|||+||++|+.+.|.++++++.+++ ..+...|++.+++++++|+|.++||+++| +|+.+
T Consensus 12 ~~~~~---~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 87 (107)
T 1gh2_A 12 FQPEL---SGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQ-AVFLEVDVHQCQGTAATNNISATPTFQFFRNKVRI 87 (107)
T ss_dssp HHHHH---HHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred HHHHH---HhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCCC-cEEEEEECccCHHHHHhcCCCcccEEEEEECCeEE
Confidence 66662 114789999999999999999999999999999966 45555678889999999999999999999 88888
Q ss_pred EEEeCCCCHHHHHHHHHHhhC
Q 021221 148 VRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 148 ~~~~G~~~~~~l~~fi~~~~~ 168 (316)
.++.|. +.++|.++|++.+|
T Consensus 88 ~~~~G~-~~~~l~~~l~~~lg 107 (107)
T 1gh2_A 88 DQYQGA-DAVGLEEKIKQHLE 107 (107)
T ss_dssp EEEESS-CHHHHHHHHHHHHC
T ss_pred EEEeCC-CHHHHHHHHHHhcC
Confidence 999996 45669999998865
No 46
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.79 E-value=4.1e-19 Score=139.68 Aligned_cols=105 Identities=17% Similarity=0.282 Sum_probs=89.1
Q ss_pred cceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccc
Q 021221 58 IVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFP 137 (316)
Q Consensus 58 ~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~P 137 (316)
.+..++.++ |++. +.+.+++++|+||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++|
T Consensus 4 ~v~~l~~~~--f~~~----~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~P 77 (122)
T 3aps_A 4 ASIDLTPQT--FNEK----VLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYP 77 (122)
T ss_dssp CSEECCHHH--HHHH----TTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSS
T ss_pred chhcCCHHH--HHHH----HhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccc
Confidence 344555544 5443 3567899999999999999999999999999999876777777888999999999999999
Q ss_pred eEEEE-eCceeEEEeCC----CCHHHHHHHHHHhhC
Q 021221 138 TLFLL-NSSMRVRYHGS----RTLDSLVAFYSDVTA 168 (316)
Q Consensus 138 ti~l~-~g~~~~~~~G~----~~~~~l~~fi~~~~~ 168 (316)
|+++| +|+.+.++.|. ++.++|.++|++.+.
T Consensus 78 t~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 78 SVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp EEEEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred eEEEEeCCCccceeeccccCcCCHHHHHHHHHHHHH
Confidence 99999 66667788876 899999999999876
No 47
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.79 E-value=1.6e-18 Score=151.30 Aligned_cols=109 Identities=22% Similarity=0.362 Sum_probs=96.2
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCc
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHG 135 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~ 135 (316)
...+..++.++ |++. +.+++++++|+|||+||++|+.+.|.++++++.+++...+..++++.+++++++|+|.+
T Consensus 11 ~~~~~~lt~~~--f~~~----v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~ 84 (222)
T 3dxb_A 11 SDKIIHLTDDS--FDTD----VLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRG 84 (222)
T ss_dssp SCCCEECCTTT--HHHH----HTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCS
T ss_pred CCCceeCCHHH--HHHH----HHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCc
Confidence 44556666666 7665 45688999999999999999999999999999999867777778999999999999999
Q ss_pred cceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhCCC
Q 021221 136 FPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 136 ~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~~~ 170 (316)
+||+++| +|+.+.++.|..+.++|.++|++.+...
T Consensus 85 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 85 IPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp BSEEEEEETTEEEEEEESCCCHHHHHHHHHHHSCCS
T ss_pred CCEEEEEECCeEEEEeccccChHHHHHHHHhhcccc
Confidence 9999999 8888999999999999999999998743
No 48
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.79 E-value=2.4e-18 Score=131.28 Aligned_cols=86 Identities=23% Similarity=0.370 Sum_probs=79.0
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCceeEEEeCCCCHHH
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDS 158 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~~~~~G~~~~~~ 158 (316)
++++++|+||++||++|+.+.|.++++++.+++ ..+...|++.+++++++|+|.++||+++| +|+.+.++.|. +.++
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~-~~~~ 96 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASESEVKSMPTFQFFKKGQKVGEFSGA-NKEK 96 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEEEEEEESS-CHHH
T ss_pred CCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhhHHHHHHcCCCcCcEEEEEECCeEEEEEeCC-CHHH
Confidence 689999999999999999999999999999988 55555678899999999999999999999 88999999999 9999
Q ss_pred HHHHHHHhh
Q 021221 159 LVAFYSDVT 167 (316)
Q Consensus 159 l~~fi~~~~ 167 (316)
|.+++++++
T Consensus 97 l~~~l~~~l 105 (105)
T 3m9j_A 97 LEATINELV 105 (105)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998763
No 49
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.79 E-value=3.3e-19 Score=141.39 Aligned_cols=105 Identities=22% Similarity=0.365 Sum_probs=85.9
Q ss_pred cceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCCh--------------HHHhhhHHHHHHHHHcCCCcEEEEEeCCC
Q 021221 58 IVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCP--------------FSRNFRPSFSVLSSLYSSIPHFAIEESAI 123 (316)
Q Consensus 58 ~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~--------------~Ck~~~p~~~~la~~~~~~~~v~~~~~~~ 123 (316)
.+..++.++ |++. +.+++++++|+|||+||+ +|+.+.|.++++++.+++...+..+|++.
T Consensus 4 ~v~~l~~~~--f~~~----~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~ 77 (123)
T 1oaz_A 4 KIIHLTDDS--FDTD----VLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQ 77 (123)
T ss_dssp SCEECCSTT--HHHH----TTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTS
T ss_pred ccEecChhh--HHHH----HHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCC
Confidence 345566666 6655 457889999999999999 99999999999999998767777778999
Q ss_pred ChhhHhhcCCCccceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 124 RPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 124 ~~~l~~~~~I~~~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
+++++++|+|+++||+++| +|+.+.++.|..+.++|.++|++.++
T Consensus 78 ~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 123 (123)
T 1oaz_A 78 NPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA 123 (123)
T ss_dssp CTTTGGGGTCCBSSEEEEEESSSEEEEEESCCCHHHHHHHHTTTCC
T ss_pred CHHHHHHcCCCccCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 9999999999999999999 89999999999999999999987653
No 50
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.79 E-value=2.5e-19 Score=139.77 Aligned_cols=107 Identities=24% Similarity=0.502 Sum_probs=90.1
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC---CcEEEEEeCCCChhhHhhcC
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS---IPHFAIEESAIRPSILSKYG 132 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~---~~~v~~~~~~~~~~l~~~~~ 132 (316)
+..+..++.++ |++. + .++++++|+||++||++|+++.|.++++++.+++ ...+...|++.+++++++|+
T Consensus 6 ~~~v~~l~~~~--~~~~----~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~ 78 (120)
T 1mek_A 6 EDHVLVLRKSN--FAEA----L-AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYG 78 (120)
T ss_dssp ETTEEECCTTT--HHHH----H-HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHT
T ss_pred CCCcEEechhh--HHHH----H-ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCC
Confidence 34456666666 7776 2 3578999999999999999999999999998863 34555567888899999999
Q ss_pred CCccceEEEE-eCcee--EEEeCCCCHHHHHHHHHHhhCC
Q 021221 133 VHGFPTLFLL-NSSMR--VRYHGSRTLDSLVAFYSDVTAS 169 (316)
Q Consensus 133 I~~~Pti~l~-~g~~~--~~~~G~~~~~~l~~fi~~~~~~ 169 (316)
|.++||+++| +|+.+ .++.|..+.++|.+|+++++++
T Consensus 79 v~~~Pt~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~ 118 (120)
T 1mek_A 79 VRGYPTIKFFRNGDTASPKEYTAGREADDIVNWLKKRTGP 118 (120)
T ss_dssp CCSSSEEEEEESSCSSSCEECCCCSSHHHHHHHHHTTSCC
T ss_pred CCcccEEEEEeCCCcCCcccccCccCHHHHHHHHHhccCC
Confidence 9999999999 88876 8999999999999999998874
No 51
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.79 E-value=1.5e-18 Score=136.39 Aligned_cols=104 Identities=21% Similarity=0.353 Sum_probs=87.4
Q ss_pred eEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceE
Q 021221 60 GVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTL 139 (316)
Q Consensus 60 ~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti 139 (316)
..++.++ |++.+... ...+++++|+||++||++|+.+.|.++++++.|++ ..+..+|++.+++++++|+|.++||+
T Consensus 16 ~~~~~~~--~~~~~~~~-~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~ 91 (122)
T 2vlu_A 16 SVHSLEQ--WTMQIEEA-NTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELKPIAEQFSVEAMPTF 91 (122)
T ss_dssp EECSHHH--HHHHHHHH-HHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred eccCHHH--HHHHHHHh-hccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCHHHHHHcCCCcccEE
Confidence 3334444 66653221 12689999999999999999999999999999988 56666688889999999999999999
Q ss_pred EEE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 140 FLL-NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 140 ~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
++| +|+.+.++.|.. .++|.++|++.++
T Consensus 92 ~~~~~G~~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 92 LFMKEGDVKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp EEEETTEEEEEEESSC-HHHHHHHHHHHHS
T ss_pred EEEeCCEEEEEEeCcC-HHHHHHHHHHHhc
Confidence 999 888889999998 9999999999876
No 52
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=1.3e-18 Score=137.90 Aligned_cols=104 Identities=22% Similarity=0.437 Sum_probs=87.4
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC-CcEEEEEeCCCChhhHhhcCCC
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS-IPHFAIEESAIRPSILSKYGVH 134 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~-~~~v~~~~~~~~~~l~~~~~I~ 134 (316)
+..+..++.++ |++. + .+.++|+|||+||++|+++.|.++++++.+++ ...+..+|++.+++++++|+|.
T Consensus 6 ~~~v~~l~~~~--f~~~----~---~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~ 76 (126)
T 1x5e_A 6 SGNVRVITDEN--WREL----L---EGDWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIIN 76 (126)
T ss_dssp CCSEEECCTTT--HHHH----T---SSEEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCC
T ss_pred CCccEEecHHH--HHHH----h---CCCEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCc
Confidence 34456666666 7766 2 23499999999999999999999999999875 4566667888999999999999
Q ss_pred ccceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhCC
Q 021221 135 GFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTAS 169 (316)
Q Consensus 135 ~~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~~ 169 (316)
++||+++| +|+ +.++.|..+.++|.+||++.++.
T Consensus 77 ~~Pt~~~~~~G~-~~~~~G~~~~~~l~~~l~~~~~~ 111 (126)
T 1x5e_A 77 ALPTIYHCKDGE-FRRYQGPRTKKDFINFISDKEWK 111 (126)
T ss_dssp SSSEEEEEETTE-EEECCSCCCHHHHHHHHHTCGGG
T ss_pred ccCEEEEEeCCe-EEEeecCCCHHHHHHHHHHHhhc
Confidence 99999999 666 68999999999999999998763
No 53
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.78 E-value=1.4e-18 Score=134.86 Aligned_cols=99 Identities=19% Similarity=0.292 Sum_probs=84.4
Q ss_pred EeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEE
Q 021221 62 IEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFL 141 (316)
Q Consensus 62 l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l 141 (316)
...+..+|+++ + +.+++++|+||++||++|+.+.|.++++++.+++ ..+..++++.+++++++|+|.++||+++
T Consensus 12 ~~~~~~~f~~~----~-~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~-v~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 85 (112)
T 1syr_A 12 IVTSQAEFDSI----I-SQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK-MVFIKVDVDEVSEVTEKENITSMPTFKV 85 (112)
T ss_dssp EECSHHHHHHH----H-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTTHHHHHHTTCCSSSEEEE
T ss_pred EECCHHHHHHH----H-ccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CEEEEEECCCCHHHHHHcCCCcccEEEE
Confidence 33444447777 2 3679999999999999999999999999999987 4555557888899999999999999999
Q ss_pred E-eCceeEEEeCCCCHHHHHHHHHHhh
Q 021221 142 L-NSSMRVRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 142 ~-~g~~~~~~~G~~~~~~l~~fi~~~~ 167 (316)
+ +|+.+.++.|. +.++|.++|++.+
T Consensus 86 ~~~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 86 YKNGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EETTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred EECCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 9 88888999999 9999999998764
No 54
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.78 E-value=3.4e-18 Score=134.91 Aligned_cols=105 Identities=15% Similarity=0.326 Sum_probs=86.8
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCC-CChhhHhhcCCC
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA-IRPSILSKYGVH 134 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~-~~~~l~~~~~I~ 134 (316)
...+..++.++ |++.+. ..++++++|+||++||++|+.+.|.++++++.++++.++.+ |++ .+++++++|+|+
T Consensus 17 ~~~v~~l~~~~--~~~~~~---~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~v-d~~~~~~~~~~~~~v~ 90 (124)
T 1faa_A 17 VGKVTEVNKDT--FWPIVK---AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKL-DCNQENKTLAKELGIR 90 (124)
T ss_dssp TTSEEEECTTT--HHHHHH---HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEE-ECSSTTHHHHHHHCCS
T ss_pred CCceEEecchh--HHHHHH---hcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCCCEEEEE-ecCcchHHHHHHcCCC
Confidence 34456666666 776622 23689999999999999999999999999999988655555 555 689999999999
Q ss_pred ccceEEEE-eCceeEEEeCCCCHHHHHHHHHHhh
Q 021221 135 GFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 135 ~~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~ 167 (316)
++||++++ +|+.+.++.|.. .++|.++|++..
T Consensus 91 ~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 91 VVPTFKILKENSVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp SSSEEEEEETTEEEEEEESSC-HHHHHHHHHHHT
T ss_pred eeeEEEEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 99999888 888888999986 999999998764
No 55
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.78 E-value=2.4e-18 Score=138.47 Aligned_cols=90 Identities=14% Similarity=0.296 Sum_probs=81.4
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE--eCceeEEEeCCCCHH
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLD 157 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~ 157 (316)
.+++++|+||++||++|+.+.|.++++++.+++...+..++++.+++++++|+|.++||+++| +|+.+ ++.|..+.+
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~G~~~-~~~G~~~~~ 115 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAFGIRSIPSILFIPMEGKPE-MAQGAMPKA 115 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSCEEEEECSSSCCE-EEESCCCHH
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHcCCCCCCEEEEECCCCcEE-EEeCCCCHH
Confidence 578999999999999999999999999999987677777789899999999999999999999 56555 899999999
Q ss_pred HHHHHHHHhhCCC
Q 021221 158 SLVAFYSDVTASL 170 (316)
Q Consensus 158 ~l~~fi~~~~~~~ 170 (316)
+|.++|++..+..
T Consensus 116 ~l~~~l~~~~~~~ 128 (136)
T 2l5l_A 116 SFKKAIDEFLLKK 128 (136)
T ss_dssp HHHHHHHHHHTSC
T ss_pred HHHHHHHHHhhcc
Confidence 9999999998743
No 56
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.78 E-value=8.8e-19 Score=143.72 Aligned_cols=90 Identities=11% Similarity=0.155 Sum_probs=82.6
Q ss_pred cCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCcee---------E
Q 021221 79 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMR---------V 148 (316)
Q Consensus 79 ~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~---------~ 148 (316)
+.+++++|+|||+||++|+.+.|.++++++.|++...+..+|++++++++++|+|.++||++++ +|+.+ .
T Consensus 21 ~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~g~~~~~ 100 (149)
T 3gix_A 21 TAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQHMKVDYGSPDHT 100 (149)
T ss_dssp CCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTEEEEEECSSSCCS
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeEEEEECCeEEEeecCCCCCC
Confidence 6789999999999999999999999999999988667777788999999999999999999988 88888 8
Q ss_pred EEeC-CCCHHHHHHHHHHhhC
Q 021221 149 RYHG-SRTLDSLVAFYSDVTA 168 (316)
Q Consensus 149 ~~~G-~~~~~~l~~fi~~~~~ 168 (316)
++.| ..+.++|.++|++...
T Consensus 101 ~~~G~~~~~~~l~~~l~~~~~ 121 (149)
T 3gix_A 101 KFVGSFKTKQDFIDLIEVIYR 121 (149)
T ss_dssp CEESCCSSHHHHHHHHHHHHH
T ss_pred eEeeecCCHHHHHHHHHHHHH
Confidence 9999 8999999999998753
No 57
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.78 E-value=5.4e-19 Score=138.70 Aligned_cols=104 Identities=25% Similarity=0.489 Sum_probs=86.8
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC-----CcEEEEEeCCCChhhHhh
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS-----IPHFAIEESAIRPSILSK 130 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~-----~~~v~~~~~~~~~~l~~~ 130 (316)
..++..+++++ |++. +.+.+++++|+|||+||++|+.+.|.|+++++.+++ ...+...|++.++ +++
T Consensus 6 ~~~v~~l~~~~--f~~~----v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~- 77 (121)
T 2djj_A 6 EGPVTVVVAKN--YNEI----VLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD- 77 (121)
T ss_dssp SCSSEECCTTT--TTTS----SSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS-
T ss_pred CCCeEEecccC--HHHH----hhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc-
Confidence 56677888877 5544 446789999999999999999999999999999986 5666667776655 665
Q ss_pred cCCCccceEEEE-eCce--eEEEeCCCCHHHHHHHHHHhhC
Q 021221 131 YGVHGFPTLFLL-NSSM--RVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 131 ~~I~~~Pti~l~-~g~~--~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
+|+++||+++| +|+. +.++.|.++.++|.+||+++++
T Consensus 78 -~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~ 117 (121)
T 2djj_A 78 -EIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGK 117 (121)
T ss_dssp -CCSSSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSS
T ss_pred -ccCcCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccC
Confidence 99999999999 5544 7889999999999999999876
No 58
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.78 E-value=6.4e-19 Score=140.28 Aligned_cols=88 Identities=20% Similarity=0.364 Sum_probs=81.2
Q ss_pred ccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCceeEEEeCCCCH
Q 021221 78 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 156 (316)
Q Consensus 78 ~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~~~~~G~~~~ 156 (316)
..++++++|+|||+||++|+++.|.++++++.+++.+.+..++++.+++++++|+|.++||+++| +|+.+.++.|..+.
T Consensus 39 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~ 118 (128)
T 3ul3_B 39 NMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTMLARKDHFVSS 118 (128)
T ss_dssp TSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCH
T ss_pred HccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEEEEecCCCCH
Confidence 45789999999999999999999999999999987666777788899999999999999999999 89999999999999
Q ss_pred HHHHHHHHH
Q 021221 157 DSLVAFYSD 165 (316)
Q Consensus 157 ~~l~~fi~~ 165 (316)
++|.++|++
T Consensus 119 ~~l~~~l~~ 127 (128)
T 3ul3_B 119 NDLIALIKK 127 (128)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHh
Confidence 999999975
No 59
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.6e-18 Score=158.09 Aligned_cols=109 Identities=24% Similarity=0.429 Sum_probs=92.7
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCC--CChhhHhhcCC
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA--IRPSILSKYGV 133 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~--~~~~l~~~~~I 133 (316)
+..+..++.++ |++. +.+.+++++|+|||+||++|+++.|.|+++++.+++...+..++++ .++++|++|+|
T Consensus 16 ~~~vv~lt~~~--f~~~----i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I 89 (298)
T 3ed3_A 16 DPHISELTPKS--FDKA----IHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDV 89 (298)
T ss_dssp CTTCEECCHHH--HHHH----HTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTC
T ss_pred CCCeEEeCHHH--HHHH----HHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCC
Confidence 34444455544 7776 4567899999999999999999999999999999987777777877 67899999999
Q ss_pred CccceEEEE-eCc-----------------eeEEEeCCCCHHHHHHHHHHhhCCC
Q 021221 134 HGFPTLFLL-NSS-----------------MRVRYHGSRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 134 ~~~Pti~l~-~g~-----------------~~~~~~G~~~~~~l~~fi~~~~~~~ 170 (316)
.++||+++| +|+ ....|.|.++.+.|.+|+.+.+++.
T Consensus 90 ~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~ 144 (298)
T 3ed3_A 90 NGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSY 144 (298)
T ss_dssp CBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCC
T ss_pred CccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccc
Confidence 999999999 665 4789999999999999999998754
No 60
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.78 E-value=1.7e-18 Score=156.37 Aligned_cols=106 Identities=17% Similarity=0.305 Sum_probs=92.7
Q ss_pred cceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccc
Q 021221 58 IVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFP 137 (316)
Q Consensus 58 ~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~P 137 (316)
.+..++.++ |++. +..+.+++|+|+|||+||++|+.+.|.++++++.+++.+.+..+|++.+++++++|+|+++|
T Consensus 8 ~v~~~~~~~--f~~~---~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~P 82 (287)
T 3qou_A 8 NIVNINESN--LQQV---LEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIP 82 (287)
T ss_dssp TEEECCTTT--HHHH---HTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSS
T ss_pred ccEECCHHH--HHHH---HHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCC
Confidence 455556655 7775 21235899999999999999999999999999999987777778999999999999999999
Q ss_pred eEEEE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 138 TLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 138 ti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
|+++| +|+.+.++.|..+.+.+.+++....+
T Consensus 83 t~~~~~~G~~~~~~~g~~~~~~l~~~l~~~lp 114 (287)
T 3qou_A 83 TVYLFQNGQPVDGFQGPQPEEAIRALLDXVLP 114 (287)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHSC
T ss_pred eEEEEECCEEEEEeeCCCCHHHHHHHHHHHcC
Confidence 99999 88899999999999999999999874
No 61
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.78 E-value=4e-18 Score=135.55 Aligned_cols=101 Identities=17% Similarity=0.251 Sum_probs=86.1
Q ss_pred ceEEeC-CcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccc
Q 021221 59 VGVIEG-DEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFP 137 (316)
Q Consensus 59 v~~l~~-~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~P 137 (316)
+..++. ++ |+++ + +.+++++|+|||+||++|+.+.|.++++++.+++ +.+..+|++.+++++++|+|.++|
T Consensus 21 v~~l~~~~~--f~~~----~-~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~P 92 (125)
T 1r26_A 21 VVDVYSVEQ--FRNI----M-SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFPT-VKFAKVDADNNSEIVSKCRVLQLP 92 (125)
T ss_dssp CEEECCHHH--HHHH----H-HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSS
T ss_pred eEECCCHHH--HHHH----H-ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCCccc
Confidence 444444 44 6666 3 5789999999999999999999999999999976 455556888899999999999999
Q ss_pred eEEEE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 138 TLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 138 ti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
|+++| +|+.+.++.| .+.++|.++|++.+.
T Consensus 93 t~~i~~~G~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 93 TFIIARSGKMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp EEEEEETTEEEEEEES-SCHHHHHHHHHHHHH
T ss_pred EEEEEeCCeEEEEEeC-CCHHHHHHHHHHHhc
Confidence 99999 8888899999 688999999998764
No 62
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.77 E-value=4.1e-18 Score=131.64 Aligned_cols=87 Identities=23% Similarity=0.375 Sum_probs=79.9
Q ss_pred CCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCceeEEEeCCCCHHHH
Q 021221 81 HEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDSL 159 (316)
Q Consensus 81 ~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~~~~~G~~~~~~l 159 (316)
+++++|+||++||++|+.+.|.++++++.+++...+...+++.+++++++|+|.++||++++ +|+.+.++.|. +.++|
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l 102 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVYKDGVKADDLVGA-SQDKL 102 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBSSEEEEEETTEEEEEEESC-CHHHH
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcccEEEEEECCeEEEEEcCC-CHHHH
Confidence 78999999999999999999999999999986566666788889999999999999999999 88888999998 99999
Q ss_pred HHHHHHhhC
Q 021221 160 VAFYSDVTA 168 (316)
Q Consensus 160 ~~fi~~~~~ 168 (316)
.++|++++.
T Consensus 103 ~~~l~~~l~ 111 (112)
T 1ep7_A 103 KALVAKHAA 111 (112)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 999998764
No 63
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=5e-19 Score=141.33 Aligned_cols=108 Identities=22% Similarity=0.499 Sum_probs=89.5
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcC--CCcEEEEEeCCCChhhHhhcCC
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEESAIRPSILSKYGV 133 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~--~~~~v~~~~~~~~~~l~~~~~I 133 (316)
..++..+++++ |++. +.+.+++++|+|||+||++|+.+.|.|+++++.++ +...+..+|++.+..++++|+|
T Consensus 6 ~~~v~~l~~~~--~~~~----~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v 79 (133)
T 2dj3_A 6 SGPVKVVVGKT--FDAI----VMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKV 79 (133)
T ss_dssp SCSSEECCTTT--CCCC----CTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCC
T ss_pred CCceEEEcCCC--HHHH----hccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCC
Confidence 55677778777 4444 44568999999999999999999999999999997 3456666788888999999999
Q ss_pred CccceEEEE-eCcee--EEEe-CCCCHHHHHHHHHHhhCC
Q 021221 134 HGFPTLFLL-NSSMR--VRYH-GSRTLDSLVAFYSDVTAS 169 (316)
Q Consensus 134 ~~~Pti~l~-~g~~~--~~~~-G~~~~~~l~~fi~~~~~~ 169 (316)
.++||+++| +|+.+ .+|. |.++.++|.+||+++++.
T Consensus 80 ~~~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~ 119 (133)
T 2dj3_A 80 EGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATK 119 (133)
T ss_dssp SSSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSS
T ss_pred CcCCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhccc
Confidence 999999999 55433 4677 568999999999999874
No 64
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.77 E-value=3.6e-18 Score=143.54 Aligned_cols=106 Identities=10% Similarity=0.224 Sum_probs=87.4
Q ss_pred EEeCCcccHHHHHhHHhc-cCCCeEEEEEEc-------CCChHHHhhhHHHHHHHHHcC-----CCcEEEEEeCCCChhh
Q 021221 61 VIEGDEVSLQMALNMVHK-NSHEYVAVLFYA-------SWCPFSRNFRPSFSVLSSLYS-----SIPHFAIEESAIRPSI 127 (316)
Q Consensus 61 ~l~~~~~~~~~~~~~i~~-~~~~~vlV~Fya-------~WC~~Ck~~~p~~~~la~~~~-----~~~~v~~~~~~~~~~l 127 (316)
+++.++.||++. +. ..+.+++|+||| +||++|+.+.|+|+++++.|. +.+.++.+|.++++++
T Consensus 20 vi~lt~~nF~~~----v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~l 95 (178)
T 3ga4_A 20 VITVTADNYPLL----SRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQL 95 (178)
T ss_dssp EEECCTTTHHHH----TTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHH
T ss_pred CEECCHHHHHHH----HcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHH
Confidence 344444457776 33 346789999999 499999999999999999987 6788888899999999
Q ss_pred HhhcCCCccceEEEE-eCce-e-----------EEE---eC-CCCHHHHHHHHHHhhCCC
Q 021221 128 LSKYGVHGFPTLFLL-NSSM-R-----------VRY---HG-SRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 128 ~~~~~I~~~Pti~l~-~g~~-~-----------~~~---~G-~~~~~~l~~fi~~~~~~~ 170 (316)
+++|||+++||+++| +|+. . ..| .| .++.+.|.+||.+.+++.
T Consensus 96 a~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~ 155 (178)
T 3ga4_A 96 VKDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNIS 155 (178)
T ss_dssp HHHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCC
T ss_pred HHHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCC
Confidence 999999999999999 5532 2 456 35 899999999999999954
No 65
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.77 E-value=4.8e-18 Score=158.42 Aligned_cols=131 Identities=25% Similarity=0.365 Sum_probs=108.4
Q ss_pred CCCchhHHHHHHhhhcCCCccccC-------CCCCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHH
Q 021221 30 LCPTESVTDSIFRFQDSFCPISCN-------DFQDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPS 102 (316)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~ 102 (316)
..+.+.+.+|+..+..|+..+... ....++..+++++ |++. +.+.+++++|+||||||++|+++.|.
T Consensus 215 ~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~--f~~~----~~~~~k~~lv~f~a~wC~~C~~~~p~ 288 (361)
T 3uem_A 215 ELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKN--FEDV----AFDEKKNVFVEFYAPWCGHCKQLAPI 288 (361)
T ss_dssp CCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTT--HHHH----HTCTTCEEEEEEECTTCHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCc--hhhh----cccCCCcEEEEEecCcCHhHHHHHHH
Confidence 456678999999999998766431 1345688888888 6665 56688999999999999999999999
Q ss_pred HHHHHHHcCCC--cEEEEEeCCCChhhHhhcCCCccceEEEE-eC--ceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 103 FSVLSSLYSSI--PHFAIEESAIRPSILSKYGVHGFPTLFLL-NS--SMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 103 ~~~la~~~~~~--~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g--~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
|+++++.|++. +.++.+|++.+. +.+|+|+++||+++| +| +.+.+|.|.++.++|.+||+++.+
T Consensus 289 ~~~la~~~~~~~~v~~~~vd~~~~~--~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~ 357 (361)
T 3uem_A 289 WDKLGETYKDHENIVIAKMDSTANE--VEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQ 357 (361)
T ss_dssp HHHHHHHTTTCSSEEEEEEETTTCB--CSSCCCCSSSEEEEECSSSSCCCEECCSCSSHHHHHHHHTTTSC
T ss_pred HHHHHHHhccCCcEEEEEEECCccc--hhhcCCcccCeEEEEECCCCcceeEecCCCCHHHHHHHHHhcCC
Confidence 99999999874 566666776655 789999999999999 44 578999999999999999998765
No 66
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.77 E-value=2.2e-18 Score=133.58 Aligned_cols=90 Identities=18% Similarity=0.383 Sum_probs=79.0
Q ss_pred cCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCceeEEEeCCCCHH
Q 021221 79 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLD 157 (316)
Q Consensus 79 ~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~~~~~G~~~~~ 157 (316)
.++++++|+||++||++|+.+.|.++++++.++++.++. .|++.+++++++|+|.++||+++| +|+.+.++.|..+.+
T Consensus 17 ~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~~-vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~G~~~~~ 95 (110)
T 2l6c_A 17 EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAPQVAISS-VDSEARPELMKELGFERVPTLVFIRDGKVAKVFSGIMNPR 95 (110)
T ss_dssp TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCTTSCEEE-EEGGGCHHHHHHTTCCSSCEEEEEESSSEEEEEESCCCHH
T ss_pred HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCCCcEEEE-EcCcCCHHHHHHcCCcccCEEEEEECCEEEEEEcCCCCHH
Confidence 467899999999999999999999999999998655444 467788999999999999999999 899999999999999
Q ss_pred HHHHHHHHhhCC
Q 021221 158 SLVAFYSDVTAS 169 (316)
Q Consensus 158 ~l~~fi~~~~~~ 169 (316)
+|.+++++..++
T Consensus 96 ~l~~~~~~~~~~ 107 (110)
T 2l6c_A 96 ELQALYASIHHH 107 (110)
T ss_dssp HHHHHHHTC---
T ss_pred HHHHHHHHHhhh
Confidence 999999987653
No 67
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.77 E-value=1e-17 Score=127.82 Aligned_cols=86 Identities=20% Similarity=0.336 Sum_probs=78.2
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCceeEEEeCCCCHHH
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDS 158 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~~~~~G~~~~~~ 158 (316)
++++++|.||++||++|+.+.|.++++++.+++...+...+++.+++++++|+|.++||++++ +|+.+.++.| .+.++
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g-~~~~~ 97 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFLKNGVKVEEFAG-ANAKR 97 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEES-CCHHH
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccEEEEEcCCcEEEEEcC-CCHHH
Confidence 789999999999999999999999999999965566666788889999999999999999999 8888899999 68999
Q ss_pred HHHHHHHh
Q 021221 159 LVAFYSDV 166 (316)
Q Consensus 159 l~~fi~~~ 166 (316)
|.++|++.
T Consensus 98 l~~~i~~~ 105 (106)
T 1xwb_A 98 LEDVIKAN 105 (106)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99999875
No 68
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.76 E-value=2e-18 Score=149.29 Aligned_cols=108 Identities=24% Similarity=0.392 Sum_probs=94.8
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCc
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHG 135 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~ 135 (316)
+..+..+++++ |+.. + ..+++++|+|||+||++|+.+.|.|+++++.+++.+.+..++++.+++++++|+|.+
T Consensus 96 ~~~v~~l~~~~--f~~~----~-~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~ 168 (210)
T 3apq_A 96 DPEIITLERRE--FDAA----V-NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNS 168 (210)
T ss_dssp CTTSEECCHHH--HHHH----H-HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCS
T ss_pred CCceEEecHHH--HHHH----H-ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCc
Confidence 44455566555 6666 2 467899999999999999999999999999998877788889999999999999999
Q ss_pred cceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhCCC
Q 021221 136 FPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 136 ~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~~~ 170 (316)
+||+++| +|+.+.++.|.++.++|.+||++.++..
T Consensus 169 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~~ 204 (210)
T 3apq_A 169 YPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHVRST 204 (210)
T ss_dssp SSEEEEECTTSCCEECCSCCCHHHHHHHHHHHHHCC
T ss_pred CCeEEEEECCCceeEecCCCCHHHHHHHHHHhCccc
Confidence 9999999 8999999999999999999999998743
No 69
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.76 E-value=4.1e-18 Score=137.62 Aligned_cols=105 Identities=18% Similarity=0.240 Sum_probs=81.7
Q ss_pred CcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCcc
Q 021221 57 DIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGF 136 (316)
Q Consensus 57 ~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~ 136 (316)
..+..++.++ |++. +.+.++ ++|+||++||++|+.+.|.++++++.|++.+.+..+|++.+++++++|+|.++
T Consensus 33 ~~v~~l~~~~--~~~~----~~~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~ 105 (140)
T 1v98_A 33 PWVVEADEKG--FAQE----VAGAPL-TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSV 105 (140)
T ss_dssp ----------------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSS
T ss_pred CccccCCHHH--HHHH----HHcCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCCCcc
Confidence 3445555555 6655 344555 99999999999999999999999999987677777788899999999999999
Q ss_pred ceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 137 PTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 137 Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
||+++| +|+.+.++.|..+.++|.+||++.++
T Consensus 106 Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 106 PTLVLFRRGAPVATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred CEEEEEeCCcEEEEEeCCCCHHHHHHHHHHHHc
Confidence 999999 88888999999999999999999876
No 70
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.76 E-value=3.4e-18 Score=133.56 Aligned_cols=85 Identities=21% Similarity=0.393 Sum_probs=77.6
Q ss_pred cCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCceeEEEeCCCCHH
Q 021221 79 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLD 157 (316)
Q Consensus 79 ~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~~~~~G~~~~~ 157 (316)
+++++++|+||++||++|+.+.|.++++++.+++ +.+...|++.+++++++|+|.++||++++ +|+.+.++.|.. .+
T Consensus 28 ~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~ 105 (114)
T 2oe3_A 28 KQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPDIAKECEVTAMPTFVLGKDGQLIGKIIGAN-PT 105 (114)
T ss_dssp HHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSBSEEEEEETTEEEEEEESSC-HH
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHCCCCcccEEEEEeCCeEEEEEeCCC-HH
Confidence 4678999999999999999999999999999988 56666688889999999999999999999 888889999998 99
Q ss_pred HHHHHHHH
Q 021221 158 SLVAFYSD 165 (316)
Q Consensus 158 ~l~~fi~~ 165 (316)
+|.++|++
T Consensus 106 ~l~~~l~~ 113 (114)
T 2oe3_A 106 ALEKGIKD 113 (114)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99999875
No 71
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.76 E-value=5.9e-18 Score=132.94 Aligned_cols=106 Identities=17% Similarity=0.282 Sum_probs=87.2
Q ss_pred cceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccc
Q 021221 58 IVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFP 137 (316)
Q Consensus 58 ~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~P 137 (316)
.+..++|+..+|++. +.+++++++|+||++||++|+.+.|.++++++.+++ ..+..+|++.+++++++|+|.++|
T Consensus 4 ~v~~~~g~~~~~~~~----~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~~~-v~~~~vd~~~~~~~~~~~~i~~~P 78 (118)
T 2f51_A 4 PIVHFNGTHEALLNR----IKEAPGLVLVDFFATWCGPCQRLGQILPSIAEANKD-VTFIKVDVDKNGNAADAYGVSSIP 78 (118)
T ss_dssp CSEEECSCHHHHHHH----HHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSS
T ss_pred cceEecCCHHHHHHH----HHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-eEEEEEECCCCHHHHHhcCCCCCC
Confidence 456677777667754 234689999999999999999999999999999944 555566888899999999999999
Q ss_pred eEEEE-e----CceeEEEeCCCCHHHHHHHHHHhhCC
Q 021221 138 TLFLL-N----SSMRVRYHGSRTLDSLVAFYSDVTAS 169 (316)
Q Consensus 138 ti~l~-~----g~~~~~~~G~~~~~~l~~fi~~~~~~ 169 (316)
|+++| + |+.+.++.|..+ ++|.+.++++...
T Consensus 79 t~~~~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~~~~ 114 (118)
T 2f51_A 79 ALFFVKKEGNEIKTLDQFVGADV-SRIKADIEKFKHH 114 (118)
T ss_dssp EEEEEEEETTEEEEEEEEESCCH-HHHHHHHHHHC--
T ss_pred EEEEEeCCCCcceEEEeecCCCH-HHHHHHHHHhhhc
Confidence 99999 7 788889999864 5699999988653
No 72
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.76 E-value=4.5e-18 Score=131.66 Aligned_cols=88 Identities=14% Similarity=0.322 Sum_probs=75.0
Q ss_pred cCCCeEEEEEEcCCChHHHhhhHHHHHHHHH--cCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCceeEEEeCCCC
Q 021221 79 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSL--YSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRT 155 (316)
Q Consensus 79 ~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~--~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~~~~~G~~~ 155 (316)
..+++++|+|||+||++|+.+.|.++++++. +++ ..+...|++.+++++++|+|.++||+++| +|+.+.++.|. +
T Consensus 19 ~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~ 96 (112)
T 3d6i_A 19 AGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSN-VSFLSIDADENSEISELFEISAVPYFIIIHKGTILKELSGA-D 96 (112)
T ss_dssp TTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTT-SEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEECSC-C
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCC-EEEEEEecccCHHHHHHcCCCcccEEEEEECCEEEEEecCC-C
Confidence 4589999999999999999999999999998 455 55555678889999999999999999999 88888999998 4
Q ss_pred HHHHHHHHHHhhC
Q 021221 156 LDSLVAFYSDVTA 168 (316)
Q Consensus 156 ~~~l~~fi~~~~~ 168 (316)
.++|.++|++.++
T Consensus 97 ~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 97 PKEYVSLLEDCKN 109 (112)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 5679999998764
No 73
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.76 E-value=1.1e-17 Score=130.67 Aligned_cols=94 Identities=21% Similarity=0.398 Sum_probs=80.3
Q ss_pred cHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCce
Q 021221 68 SLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSM 146 (316)
Q Consensus 68 ~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~ 146 (316)
+|++.+. ..++++++|+|||+||++|+.+.|.++++++.+ + ..+...|++.+++++++|+|.++||++++ +|+.
T Consensus 23 ~~~~~l~---~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~-~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~ 97 (117)
T 2xc2_A 23 DLESLLE---QHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY-D-AIFVKVDVDKLEETARKYNISAMPTFIAIKNGEK 97 (117)
T ss_dssp HHHHHHH---HTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS-S-SEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEE
T ss_pred HHHHHHH---hCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc-C-cEEEEEECCccHHHHHHcCCCccceEEEEeCCcE
Confidence 3666622 237899999999999999999999999999988 4 45555678889999999999999999999 8888
Q ss_pred eEEEeCCCCHHHHHHHHHHhh
Q 021221 147 RVRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 147 ~~~~~G~~~~~~l~~fi~~~~ 167 (316)
+.++.| .+.++|.++|++++
T Consensus 98 ~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 98 VGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EEEEES-SCHHHHHHHHHHHC
T ss_pred EEEEeC-CCHHHHHHHHHHhC
Confidence 899999 58999999998763
No 74
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.76 E-value=8.9e-18 Score=162.54 Aligned_cols=134 Identities=19% Similarity=0.372 Sum_probs=111.8
Q ss_pred CCCch--hHHHHHHhhhcCCCcccc------CCCCCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhH
Q 021221 30 LCPTE--SVTDSIFRFQDSFCPISC------NDFQDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRP 101 (316)
Q Consensus 30 ~~~~~--~~~~~~~~~~~~~~~~~~------~~~~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p 101 (316)
..+.+ .+.+|+..+..|+..+.. .....++..+++++ |++. +.+++++++|+|||+||++|+++.|
T Consensus 317 ~~t~e~~~l~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~--~~~~----~~~~~k~vlv~f~a~wC~~C~~~~p 390 (481)
T 3f8u_A 317 EFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAEN--FDEI----VNNENKDVLIEFYAPWCGHCKNLEP 390 (481)
T ss_dssp CCCTTSHHHHHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTT--HHHH----HTCTTCEEEEEEECTTBHHHHHHHH
T ss_pred ccCccHHHHHHHHHHHhcCCcccccccCCCCCCCCCCeEEecccC--HHHH----hhcCCCcEEEEEecCcChhHHHhhH
Confidence 34556 899999999999887643 23456788899998 6665 5667899999999999999999999
Q ss_pred HHHHHHHHcCC--CcEEEEEeCCCChhhHhhcCCCccceEEEE-eCce--eEEEeCCCCHHHHHHHHHHhhCCC
Q 021221 102 SFSVLSSLYSS--IPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSM--RVRYHGSRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 102 ~~~~la~~~~~--~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~--~~~~~G~~~~~~l~~fi~~~~~~~ 170 (316)
.|+++++.|++ .+.+...|++.+ +++++|+|.++||+++| +|+. +.+|.|.++.++|.+||+++.+..
T Consensus 391 ~~~~l~~~~~~~~~v~~~~id~~~~-~~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~~~ 463 (481)
T 3f8u_A 391 KYKELGEKLSKDPNIVIAKMDATAN-DVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREATNP 463 (481)
T ss_dssp HHHHHHHHTTTCSSEEEEEEETTSS-CCCTTCCCCSSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHhccCCCEEEEEEECCch-hhHhhCCCcccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhcCCc
Confidence 99999999987 355666677665 89999999999999999 5554 789999999999999999998743
No 75
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.76 E-value=1.2e-17 Score=132.49 Aligned_cols=107 Identities=21% Similarity=0.310 Sum_probs=85.8
Q ss_pred CCcceEE-eCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCC
Q 021221 56 QDIVGVI-EGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVH 134 (316)
Q Consensus 56 ~~~v~~l-~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~ 134 (316)
..++..+ +.++ |++.+... ...+++++|+||++||++|+.+.|.++++++.++++ .+..++++.+++++++|+|.
T Consensus 15 ~~~v~~l~~~~~--~~~~l~~~-~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v-~~~~vd~d~~~~l~~~~~v~ 90 (124)
T 1xfl_A 15 EGQVIACHTVET--WNEQLQKA-NESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNV-LFLKVDTDELKSVASDWAIQ 90 (124)
T ss_dssp CSCCEEESSHHH--HHHHHHHH-HHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCSSE-EEEEEETTTSHHHHHHTTCC
T ss_pred CCcEEEeCCHHH--HHHHHHHh-hhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCc-EEEEEECccCHHHHHHcCCC
Confidence 3444444 2333 66653322 125899999999999999999999999999999864 44455788899999999999
Q ss_pred ccceEEEE-eCceeEEEeCCCCHHHHHHHHHHhh
Q 021221 135 GFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 135 ~~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~ 167 (316)
++||+++| +|+.+.++.|. +.++|.++|++.+
T Consensus 91 ~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 123 (124)
T 1xfl_A 91 AMPTFMFLKEGKILDKVVGA-KKDELQSTIAKHL 123 (124)
T ss_dssp SSSEEEEEETTEEEEEEESC-CHHHHHHHHHHHC
T ss_pred ccCEEEEEECCEEEEEEeCC-CHHHHHHHHHHhc
Confidence 99999999 88888899994 8999999998865
No 76
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.75 E-value=8.3e-19 Score=137.45 Aligned_cols=99 Identities=19% Similarity=0.262 Sum_probs=77.3
Q ss_pred ceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCC-cEEEEEe---CCCChhhHhhcCCC
Q 021221 59 VGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI-PHFAIEE---SAIRPSILSKYGVH 134 (316)
Q Consensus 59 v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~-~~v~~~~---~~~~~~l~~~~~I~ 134 (316)
+..++.++ |++. + .++++++|+|||+||++|+++.|.++++++.++.. ..+.+++ .+..++++++|+|.
T Consensus 14 ~~~~~~~~--~~~~----~-~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~ 86 (118)
T 1zma_A 14 LEVTTVVR--AQEA----L-DKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIP 86 (118)
T ss_dssp SEECCHHH--HHHH----H-HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCC
T ss_pred hhcCCHHH--HHHH----H-hCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCC
Confidence 34444444 5555 2 45789999999999999999999999999988642 2232221 12335789999999
Q ss_pred ccceEEEE-eCceeEEEeCCCCHHHHHHHHH
Q 021221 135 GFPTLFLL-NSSMRVRYHGSRTLDSLVAFYS 164 (316)
Q Consensus 135 ~~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~ 164 (316)
++||+++| +|+.+.++.|..+.++|.+||+
T Consensus 87 ~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 87 TVPGFVHITDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp SSCEEEEEETTEEEEECCTTCCHHHHHHHHT
T ss_pred CCCeEEEEECCEEEEEecCCCCHHHHHHHhh
Confidence 99999999 8888999999999999999985
No 77
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.75 E-value=8.3e-18 Score=163.84 Aligned_cols=107 Identities=22% Similarity=0.439 Sum_probs=95.1
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCC-cEEEEEeCCCChhhHhhcCCC
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI-PHFAIEESAIRPSILSKYGVH 134 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~-~~v~~~~~~~~~~l~~~~~I~ 134 (316)
..++..++.++ |++. + +++++++|+||||||++|+++.|.|+++++.+++. +.++.+||+.++++|++|+|+
T Consensus 13 ~~~v~~l~~~~--f~~~----~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~ 85 (504)
T 2b5e_A 13 DSAVVKLATDS--FNEY----I-QSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIP 85 (504)
T ss_dssp TSSCEECCTTT--HHHH----H-TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCC
T ss_pred CCCcEECCHHH--HHHH----H-hcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCC
Confidence 45566666666 7776 2 56899999999999999999999999999999885 888888999999999999999
Q ss_pred ccceEEEE-eCce--eEEEeCCCCHHHHHHHHHHhhCC
Q 021221 135 GFPTLFLL-NSSM--RVRYHGSRTLDSLVAFYSDVTAS 169 (316)
Q Consensus 135 ~~Pti~l~-~g~~--~~~~~G~~~~~~l~~fi~~~~~~ 169 (316)
++||+++| +|+. +.+|.|.++.+.|.+|+.+.+++
T Consensus 86 ~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~~~ 123 (504)
T 2b5e_A 86 GFPSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQP 123 (504)
T ss_dssp SSSEEEEEETTCTTCEEECCSCCSHHHHHHHHHHHTSC
T ss_pred cCCEEEEEeCCccccceeecCCCCHHHHHHHHHHhcCC
Confidence 99999999 7776 88999999999999999999875
No 78
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.75 E-value=1.1e-17 Score=131.77 Aligned_cols=98 Identities=18% Similarity=0.308 Sum_probs=77.3
Q ss_pred ceEEeCCcccHHHHHhHHhccCC--CeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCcc
Q 021221 59 VGVIEGDEVSLQMALNMVHKNSH--EYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGF 136 (316)
Q Consensus 59 v~~l~~~~~~~~~~~~~i~~~~~--~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~ 136 (316)
+..++.++ |.+. +.+.+ ++++|+|||+||++|+.+.|.+++++++|+++.++. +|.++. +++|+|+++
T Consensus 5 v~~it~~~--f~~~----v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~v~f~k-vd~d~~---~~~~~v~~~ 74 (118)
T 3evi_A 5 LREISGNQ--YVNE----VTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPETKFVK-AIVNSC---IQHYHDNCL 74 (118)
T ss_dssp CEECCGGG--HHHH----TTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTTSEEEE-EEGGGT---STTCCGGGC
T ss_pred eEEeCHHH--HHHH----HHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCCCEEEE-EEhHHh---HHHCCCCCC
Confidence 34444444 6665 33333 499999999999999999999999999998855554 455543 589999999
Q ss_pred ceEEEE-eCceeEEEeCCC-------CHHHHHHHHHHh
Q 021221 137 PTLFLL-NSSMRVRYHGSR-------TLDSLVAFYSDV 166 (316)
Q Consensus 137 Pti~l~-~g~~~~~~~G~~-------~~~~l~~fi~~~ 166 (316)
||+++| +|+.+.++.|.. +.++|..++.+.
T Consensus 75 PT~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 75 PTIFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp SEEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred CEEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 999999 999999999864 678888888764
No 79
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.75 E-value=3.1e-18 Score=137.76 Aligned_cols=85 Identities=18% Similarity=0.237 Sum_probs=75.6
Q ss_pred eEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeC---------CCChhhHhhcCCCccceEEEE-eCceeEEEeC
Q 021221 83 YVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEES---------AIRPSILSKYGVHGFPTLFLL-NSSMRVRYHG 152 (316)
Q Consensus 83 ~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~---------~~~~~l~~~~~I~~~Pti~l~-~g~~~~~~~G 152 (316)
+++|+|||+||++|+.+.|.++++++.++ +. +..+++ +.+++++++|+|.++||+++| +|+.+.++.|
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-v~-~~~vd~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~G 110 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD-VP-IVMFIWGSLIGERELSAARLEMNKAGVEGTPTLVFYKEGRIVDKLVG 110 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC-SC-EEEEEECTTCCHHHHHHHHHHHHHHTCCSSSEEEEEETTEEEEEEES
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC-CE-EEEEECCCchhhhhhhhhHHHHHHcCCceeCeEEEEcCCEEEEEEeC
Confidence 99999999999999999999999999997 44 444456 667899999999999999999 8999999999
Q ss_pred CCCHHHHHHHHHHhhCC
Q 021221 153 SRTLDSLVAFYSDVTAS 169 (316)
Q Consensus 153 ~~~~~~l~~fi~~~~~~ 169 (316)
..+.+.+.+++++..+.
T Consensus 111 ~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 111 ATPWSLKVEKAREIYGG 127 (135)
T ss_dssp CCCHHHHHHHHHHHC--
T ss_pred CCCHHHHHHHHHHHhCC
Confidence 99999999999999874
No 80
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.75 E-value=3.2e-17 Score=124.59 Aligned_cols=86 Identities=22% Similarity=0.388 Sum_probs=77.2
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCceeEEEeCCCCHHH
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDS 158 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~~~~~G~~~~~~ 158 (316)
.+++++|.||++||++|+.+.|.++++++.+++ ..+...+++.+++++++|+|.++||++++ +|+.+.++.| .+.++
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~G-~~~~~ 95 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIPE-VEFAKVDVDQNEEAAAKYSVTAMPTFVFIKDGKEVDRFSG-ANETK 95 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEES-SCHHH
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCCC-CEEEEEeccCCHHHHHHcCCccccEEEEEeCCcEEEEEeC-CCHHH
Confidence 789999999999999999999999999999986 44555578889999999999999999999 8888889999 58999
Q ss_pred HHHHHHHhh
Q 021221 159 LVAFYSDVT 167 (316)
Q Consensus 159 l~~fi~~~~ 167 (316)
|.++|++.+
T Consensus 96 l~~~l~~~l 104 (104)
T 2vim_A 96 LRETITRHK 104 (104)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhhC
Confidence 999998763
No 81
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.75 E-value=1.2e-17 Score=134.40 Aligned_cols=111 Identities=22% Similarity=0.313 Sum_probs=89.2
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCc
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHG 135 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~ 135 (316)
..++..+.. ..+|++.+... ...+++++|+||++||++|+.+.|.++++++.++++. +..++++.+++++++|+|.+
T Consensus 23 ~~~~~~i~~-~~~~~~~~~~~-~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~-~~~v~~~~~~~~~~~~~v~~ 99 (139)
T 3d22_A 23 GGNVHLITT-KERWDQKLSEA-SRDGKIVLANFSARWCGPSRQIAPYYIELSENYPSLM-FLVIDVDELSDFSASWEIKA 99 (139)
T ss_dssp CTTCEEECS-HHHHHHHHHHH-HHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSE-EEEEETTTSHHHHHHTTCCE
T ss_pred CCcEEEeCC-HHHHHHHHHHH-hhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCE-EEEEeCcccHHHHHHcCCCc
Confidence 334444432 22377764322 1357899999999999999999999999999997654 44557888999999999999
Q ss_pred cceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhCCC
Q 021221 136 FPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 136 ~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~~~ 170 (316)
+||++++ +|+.+.++.|. +.++|.++|++.++..
T Consensus 100 ~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~~~ 134 (139)
T 3d22_A 100 TPTFFFLRDGQQVDKLVGA-NKPELHKKITAILDSL 134 (139)
T ss_dssp ESEEEEEETTEEEEEEESC-CHHHHHHHHHHHHHTS
T ss_pred ccEEEEEcCCeEEEEEeCC-CHHHHHHHHHHHhccC
Confidence 9999999 89989999998 8999999999988743
No 82
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.74 E-value=1.4e-17 Score=131.76 Aligned_cols=93 Identities=12% Similarity=0.152 Sum_probs=82.8
Q ss_pred ccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEe--CCCChhhHhhcCCCccceEEEE--eCceeEEEeCC
Q 021221 78 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEE--SAIRPSILSKYGVHGFPTLFLL--NSSMRVRYHGS 153 (316)
Q Consensus 78 ~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~--~~~~~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~ 153 (316)
...+++++|+||++||++|+.+.|.++++++.+++.+.+..++ ++.+.+++++|+|.++||+++| +|+.+.++.|.
T Consensus 23 ~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~ 102 (126)
T 2l57_A 23 AKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQGL 102 (126)
T ss_dssp CCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEESC
T ss_pred HhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEecCC
Confidence 3578999999999999999999999999999996555566667 7788899999999999999999 58888899999
Q ss_pred CCHHHHHHHHHHhhCCC
Q 021221 154 RTLDSLVAFYSDVTASL 170 (316)
Q Consensus 154 ~~~~~l~~fi~~~~~~~ 170 (316)
.+.++|.++|++..+..
T Consensus 103 ~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 103 MRKNNIETILNSLGVKE 119 (126)
T ss_dssp CCHHHHHHHHHHHCCCC
T ss_pred CCHHHHHHHHHHHhccc
Confidence 99999999999998854
No 83
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=8.1e-19 Score=141.34 Aligned_cols=106 Identities=18% Similarity=0.290 Sum_probs=87.3
Q ss_pred CcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC-CcEEEEEeCCCChhhHhhcCCC-
Q 021221 57 DIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS-IPHFAIEESAIRPSILSKYGVH- 134 (316)
Q Consensus 57 ~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~-~~~v~~~~~~~~~~l~~~~~I~- 134 (316)
..+..++.++ |++.+ ....+++++|+|||+||++|+.+.|.|+++++.|++ ...+..+|++++++++++|+|.
T Consensus 7 ~~v~~l~~~~--f~~~~---~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~ 81 (137)
T 2dj0_A 7 GYIKYFNDKT--IDEEL---ERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVST 81 (137)
T ss_dssp SCCEECCTTH--HHHHH---HHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCC
T ss_pred ceEEEccHhh--HHHHH---hcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcc
Confidence 3455556555 77762 234556999999999999999999999999999975 5667777888999999999999
Q ss_pred -----ccceEEEE-eCceeEEEeCCCCHHHHHHHHHHhh
Q 021221 135 -----GFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 135 -----~~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~ 167 (316)
++||+++| +|+.+.++.|..+.++|.+|+.+..
T Consensus 82 ~~~~~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~ 120 (137)
T 2dj0_A 82 SPLTKQLPTLILFQGGKEAMRRPQIDKKGRAVSWTFSEE 120 (137)
T ss_dssp CSSSSCSSEEEEESSSSEEEEESCBCSSSCBCCCCCCHH
T ss_pred cCCcCCCCEEEEEECCEEEEEecCcCchHHHHHHHhccc
Confidence 99999999 8999999999988877777765543
No 84
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.74 E-value=9.8e-18 Score=136.33 Aligned_cols=89 Identities=10% Similarity=0.143 Sum_probs=77.4
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCceeE---------E
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRV---------R 149 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~~---------~ 149 (316)
.+++++|+|||+||++|+.+.|.++++++.+++...+..+|++++++++++|+|+++||+++| +|+.+. +
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~~v~~~~g~~~~~~ 101 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNK 101 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTEEEEEECC------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEEEEEECCcEEEEecCCCCcce
Confidence 689999999999999999999999999999977667777788899999999999999999999 777765 3
Q ss_pred EeCCCC-HHHHHHHHHHhhC
Q 021221 150 YHGSRT-LDSLVAFYSDVTA 168 (316)
Q Consensus 150 ~~G~~~-~~~l~~fi~~~~~ 168 (316)
..|..+ .++|.++|++...
T Consensus 102 ~~g~~~~~~~l~~~i~~~~~ 121 (142)
T 1qgv_A 102 INWAMEDKQEMVDIIETVYR 121 (142)
T ss_dssp CCSCCSCHHHHHHHHHHHHH
T ss_pred eeeecCcHHHHHHHHHHHHH
Confidence 456554 8999999998765
No 85
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.74 E-value=3.7e-17 Score=134.29 Aligned_cols=89 Identities=21% Similarity=0.354 Sum_probs=79.4
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCceeEEEeCCCCHHH
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDS 158 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~~~~~G~~~~~~ 158 (316)
.+++++|+||++||++|+.+.|.++++++.++++ .+..+|++.+++++++|+|.++||+++| +|+.+.++.|. +.++
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v-~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~ 108 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQV-SFVKLEAEGVPEVSEKYEISSVPTFLFFKNSQKIDRLDGA-HAPE 108 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTS-EEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEEEEEESS-CHHH
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcCCe-EEEEEECCCCHHHHHHcCCCCCCEEEEEECCEEEEEEeCC-CHHH
Confidence 3899999999999999999999999999999764 4555578889999999999999999999 88888888885 7889
Q ss_pred HHHHHHHhhCCC
Q 021221 159 LVAFYSDVTASL 170 (316)
Q Consensus 159 l~~fi~~~~~~~ 170 (316)
|.++|++.++..
T Consensus 109 l~~~i~~~l~~~ 120 (153)
T 2wz9_A 109 LTKKVQRHASSG 120 (153)
T ss_dssp HHHHHHHHSCTT
T ss_pred HHHHHHHHhccc
Confidence 999999998854
No 86
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.74 E-value=1.9e-17 Score=130.51 Aligned_cols=88 Identities=19% Similarity=0.323 Sum_probs=79.9
Q ss_pred cCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCC-cEEEEEeCCCChhhHhhcCCCccceEEEE-eCceeEEEeCCCCH
Q 021221 79 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI-PHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 156 (316)
Q Consensus 79 ~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~-~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~~~~~G~~~~ 156 (316)
+.+++++|+||++||++|+.+.|.++++++.+++. ..+...+++.+++++++|+|.++||+++| +|+.+.++.|. +.
T Consensus 31 ~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~ 109 (121)
T 2j23_A 31 GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFVFFKNGQKIDTVVGA-DP 109 (121)
T ss_dssp SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSEEEEEETTEEEEEEESS-CH
T ss_pred cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccEEEEEECCeEEeeEcCC-CH
Confidence 67899999999999999999999999999988763 55666688889999999999999999999 88888999999 99
Q ss_pred HHHHHHHHHhh
Q 021221 157 DSLVAFYSDVT 167 (316)
Q Consensus 157 ~~l~~fi~~~~ 167 (316)
++|.++|++.+
T Consensus 110 ~~l~~~l~~~l 120 (121)
T 2j23_A 110 SKLQAAITQHS 120 (121)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhh
Confidence 99999999875
No 87
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.73 E-value=1.8e-17 Score=146.44 Aligned_cols=108 Identities=21% Similarity=0.349 Sum_probs=90.3
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC---CcEEEEEeC--CCChhhHhh
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS---IPHFAIEES--AIRPSILSK 130 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~---~~~v~~~~~--~~~~~l~~~ 130 (316)
..++..++.++ |++. +.+.+++++|+|||+||++|+++.|.|+++++.+++ .+.+..+|+ +.+++++++
T Consensus 11 ~~~v~~l~~~~--f~~~----i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~ 84 (244)
T 3q6o_A 11 SDPLTLLQADT--VRGA----VLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRD 84 (244)
T ss_dssp TSSSEEECTTT--HHHH----HSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHH
T ss_pred CCCceeCChhh--HHHH----HhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHH
Confidence 66788888888 6665 567789999999999999999999999999999986 567777788 678999999
Q ss_pred cCCCccceEEEE-eCc-----eeEEEeCCCCHHHHHHHHHHhhCCC
Q 021221 131 YGVHGFPTLFLL-NSS-----MRVRYHGSRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 131 ~~I~~~Pti~l~-~g~-----~~~~~~G~~~~~~l~~fi~~~~~~~ 170 (316)
|+|+++||+++| +|+ ...++.| ++.+.|.++|.+.+...
T Consensus 85 ~~v~~~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~ 129 (244)
T 3q6o_A 85 FNIPGFPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESH 129 (244)
T ss_dssp TTCCSSSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTC
T ss_pred cCCCccCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhc
Confidence 999999999999 432 2235556 79999999999988743
No 88
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.73 E-value=1.3e-17 Score=146.14 Aligned_cols=127 Identities=17% Similarity=0.362 Sum_probs=98.0
Q ss_pred CchhHHHHHHhhhcCCCccccCCCCCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcC
Q 021221 32 PTESVTDSIFRFQDSFCPISCNDFQDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS 111 (316)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~ 111 (316)
+.+.+.+++......... ..+..+..++.++ |++. + +.+++++|+|||+||++|+.+.|.++++++.+.
T Consensus 109 ~~~~l~~~i~~~~~~~~~----~~~~~~~~~~~~~--~~~~----~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~ 177 (241)
T 3idv_A 109 TQEEIVAKVREVSQPDWT----PPPEVTLVLTKEN--FDEV----V-NDADIILVEFYAPWCGHCKKLAPEYEKAAKELS 177 (241)
T ss_dssp CHHHHHHHHHHHHSTTCC----CCCCSSEECCTTT--HHHH----H-HHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHH
T ss_pred cHHHHHHHHhhccCcccc----cccccceeccHHH--HHHh----h-ccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHh
Confidence 344555665554433222 1233455566666 7776 2 356899999999999999999999999999886
Q ss_pred CC---cEEEEEeCCCChhhHhhcCCCccceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhCCC
Q 021221 112 SI---PHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 112 ~~---~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~~~ 170 (316)
+. +.+..+|++.+++++++|+|+++||+++| +|+. ..|.|.++.++|.+||.+++++.
T Consensus 178 ~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~-~~~~g~~~~~~l~~~l~~~~~~~ 239 (241)
T 3idv_A 178 KRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGRP-YDYNGPREKYGIVDYMIEQSGAA 239 (241)
T ss_dssp TSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEE-EECCSCCSHHHHHHHHHHHTTCT
T ss_pred ccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECCeE-EEecCCCCHHHHHHHHHhhhCCC
Confidence 53 56666788899999999999999999999 5655 45999999999999999998854
No 89
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.73 E-value=1.1e-17 Score=163.33 Aligned_cols=109 Identities=21% Similarity=0.351 Sum_probs=92.8
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC---CcEEEEEeCC--CChhhHhh
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS---IPHFAIEESA--IRPSILSK 130 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~---~~~v~~~~~~--~~~~l~~~ 130 (316)
..++..+++++ |++. +.+.+++++|+|||+||++|+++.|.|+++++.+++ .+.+..+|++ ++++++++
T Consensus 11 ~~~V~~Lt~~~--f~~~----v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~ 84 (519)
T 3t58_A 11 SDPLTLLDADS--VRPT----VLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCRE 84 (519)
T ss_dssp TSSSEEECTTT--HHHH----HSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHH
T ss_pred CCCcEECChHH--HHHH----HHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHH
Confidence 56788888888 6665 556789999999999999999999999999999986 5677777874 58899999
Q ss_pred cCCCccceEEEE-e----CceeEEEeCCCCHHHHHHHHHHhhCCC
Q 021221 131 YGVHGFPTLFLL-N----SSMRVRYHGSRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 131 ~~I~~~Pti~l~-~----g~~~~~~~G~~~~~~l~~fi~~~~~~~ 170 (316)
|+|+++||+++| + |+.+..+.|.++.++|.++|.+.+...
T Consensus 85 ~~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~ 129 (519)
T 3t58_A 85 FNIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESH 129 (519)
T ss_dssp TTCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTC
T ss_pred cCCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhc
Confidence 999999999999 3 334567788899999999999998743
No 90
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.72 E-value=5e-17 Score=125.55 Aligned_cols=97 Identities=21% Similarity=0.383 Sum_probs=81.8
Q ss_pred HHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCcee
Q 021221 69 LQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMR 147 (316)
Q Consensus 69 ~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~ 147 (316)
|++.+... ...+++++|+||++||++|+.+.|.++++++.+++ ..+...+++.+++++++|+|.++||+++| +|+.+
T Consensus 15 ~~~~~~~~-~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 92 (113)
T 1ti3_A 15 WKEHFEKG-KGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPN-VTFLKVDVDELKAVAEEWNVEAMPTFIFLKDGKLV 92 (113)
T ss_dssp HHHHHHHH-TTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCSS-EEEEEEETTTCHHHHHHHHCSSTTEEEEEETTEEE
T ss_pred HHHHHHHh-hhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCCC-cEEEEEEccccHHHHHhCCCCcccEEEEEeCCEEE
Confidence 66663322 23589999999999999999999999999999986 44455578889999999999999999999 88888
Q ss_pred EEEeCCCCHHHHHHHHHHhhC
Q 021221 148 VRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 148 ~~~~G~~~~~~l~~fi~~~~~ 168 (316)
.++.| .+.++|.++|++.+.
T Consensus 93 ~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 93 DKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp EEEEC-CCTTHHHHHHHHHHH
T ss_pred EEEec-CCHHHHHHHHHHhhc
Confidence 88999 588999999998763
No 91
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.72 E-value=4.1e-17 Score=130.94 Aligned_cols=86 Identities=14% Similarity=0.300 Sum_probs=76.0
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE---eCc--eeEEEeCCC
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL---NSS--MRVRYHGSR 154 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~---~g~--~~~~~~G~~ 154 (316)
.+++++|+|||+||++|+.+.|.++++++.+ + +.+..+|++.+++++++|+|.++||+++| +|+ .+.++.|.
T Consensus 39 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~g~g~~~~~~~G~- 115 (133)
T 3cxg_A 39 QNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY-Y-VTLVDIDVDIHPKLNDQHNIKALPTFEFYFNLNNEWVLVHTVEGA- 115 (133)
T ss_dssp CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE-E-CEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESC-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhc-C-EEEEEEeccchHHHHHhcCCCCCCEEEEEEecCCCeEEEEEEcCC-
Confidence 4689999999999999999999999999887 3 44555578889999999999999999998 677 77888998
Q ss_pred CHHHHHHHHHHhhC
Q 021221 155 TLDSLVAFYSDVTA 168 (316)
Q Consensus 155 ~~~~l~~fi~~~~~ 168 (316)
+.++|.++|++.++
T Consensus 116 ~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 116 NQNDIEKAFQKYCL 129 (133)
T ss_dssp CHHHHHHHHHHHSE
T ss_pred CHHHHHHHHHHHHH
Confidence 89999999998875
No 92
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.72 E-value=8.1e-18 Score=136.94 Aligned_cols=104 Identities=12% Similarity=0.146 Sum_probs=75.4
Q ss_pred ceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCC--ChHHHhhhHHHHHHHHHcCCCcE--EEEEeCCCChhhHhhcCCC
Q 021221 59 VGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASW--CPFSRNFRPSFSVLSSLYSSIPH--FAIEESAIRPSILSKYGVH 134 (316)
Q Consensus 59 v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~W--C~~Ck~~~p~~~~la~~~~~~~~--v~~~~~~~~~~l~~~~~I~ 134 (316)
+..++.++ |++. + ...+.++|.||++| |++|+.+.|.|+++++.| +.+. +..+|++++++++++|+|+
T Consensus 19 ~~~l~~~~--f~~~----i-~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~~la~~~~V~ 90 (142)
T 2es7_A 19 WQPVEAST--VDDW----I-KRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSEAIGDRFNVR 90 (142)
T ss_dssp CEECCCC---------------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHHHHHHTTTCC
T ss_pred Cccccccc--HHHH----H-HhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCHHHHHhcCCC
Confidence 45555555 7776 3 34556889999988 999999999999999999 5455 6667888889999999999
Q ss_pred ccceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhCCC
Q 021221 135 GFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 135 ~~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~~~ 170 (316)
++||+++| +|+.+.++.|.++.++|.++|++.++..
T Consensus 91 ~iPT~~~fk~G~~v~~~~G~~~~~~l~~~i~~~l~~~ 127 (142)
T 2es7_A 91 RFPATLVFTDGKLRGALSGIHPWAELLTLMRSIVDTP 127 (142)
T ss_dssp SSSEEEEESCC----CEESCCCHHHHHHHHHHHHC--
T ss_pred cCCeEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhccc
Confidence 99999999 8999999999999999999999998743
No 93
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.71 E-value=9.1e-17 Score=125.04 Aligned_cols=98 Identities=17% Similarity=0.295 Sum_probs=82.4
Q ss_pred HHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCcee
Q 021221 69 LQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMR 147 (316)
Q Consensus 69 ~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~ 147 (316)
|++.+.... ..+++++|+||++||++|+.+.|.++++++.++++. +...+++.+++++++|+|.++||+++| +|+.+
T Consensus 17 ~~~~~~~~~-~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~-~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 94 (118)
T 2vm1_A 17 FDTHMANGK-DTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPGAI-FLKVDVDELKDVAEAYNVEAMPTFLFIKDGEKV 94 (118)
T ss_dssp HHHHHHHHH-HHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSE-EEEEETTTSHHHHHHTTCCSBSEEEEEETTEEE
T ss_pred HHHHHHhcc-cCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCCCcE-EEEEEcccCHHHHHHcCCCcCcEEEEEeCCeEE
Confidence 666533221 247899999999999999999999999999998644 455578889999999999999999999 88888
Q ss_pred EEEeCCCCHHHHHHHHHHhhCC
Q 021221 148 VRYHGSRTLDSLVAFYSDVTAS 169 (316)
Q Consensus 148 ~~~~G~~~~~~l~~fi~~~~~~ 169 (316)
.++.| .+.++|.++|++.++.
T Consensus 95 ~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 95 DSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp EEEES-CCHHHHHHHHHHHHC-
T ss_pred EEecC-CCHHHHHHHHHHHhcc
Confidence 88999 4899999999998863
No 94
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.71 E-value=1.6e-16 Score=140.69 Aligned_cols=142 Identities=20% Similarity=0.146 Sum_probs=105.5
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEE--cCCChHHHhhhHHHHHHHHHcC---CCcEEEEEeCCC-----Ch
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFY--ASWCPFSRNFRPSFSVLSSLYS---SIPHFAIEESAI-----RP 125 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fy--a~WC~~Ck~~~p~~~~la~~~~---~~~~v~~~~~~~-----~~ 125 (316)
+..+..++..+ |++. .+.+++|+|+|| ||||+ +.|.|+++++.|. +.+.|+.+||+. ++
T Consensus 15 ~~~v~~Lt~~n--F~~v-----i~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~ 83 (248)
T 2c0g_A 15 CTGCVDLDELS--FEKT-----VERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENK 83 (248)
T ss_dssp CTTCEECCTTT--HHHH-----HTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTH
T ss_pred CCCcEECCHHH--HHHH-----HhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccH
Confidence 44456666666 7775 257789999999 99999 9999999999984 457778888887 89
Q ss_pred hhHhhcCCC--ccceEEEEeCc--eeEEE--eCCCCHHHHHHHHHHhhCCCCCCCcccccccCccccCCC-ccccccCCc
Q 021221 126 SILSKYGVH--GFPTLFLLNSS--MRVRY--HGSRTLDSLVAFYSDVTASLDKISPDKVGKASNHEKHNN-TEEESCPFS 198 (316)
Q Consensus 126 ~l~~~~~I~--~~Pti~l~~g~--~~~~~--~G~~~~~~l~~fi~~~~~~~~~~~~~~~~~~~~~~~~~~-v~f~~~~~p 198 (316)
++|++|+|+ ++||+++|.|+ .+.+| .|.++.++|.+||+++++.... ..-.+. +.+.+ ..| .. +
T Consensus 84 ~la~~~~V~~~~~PTl~~F~G~~~~~~~y~~~G~~~~~~L~~fi~~~~~~~~~--~~g~i~----~~d~l~~~f-~~--~ 154 (248)
T 2c0g_A 84 ALGDRYKVDDKNFPSIFLFKGNADEYVQLPSHVDVTLDNLKAFVSANTPLYIG--RDGCIK----EFNEVLKNY-AN--I 154 (248)
T ss_dssp HHHHHTTCCTTSCCEEEEESSSSSSEEECCTTSCCCHHHHHHHHHHHSSCCCC--CTTCCH----HHHHHHTTG-GG--S
T ss_pred HHHHHhCCCcCCCCeEEEEeCCcCcceeecccCCCCHHHHHHHHHHhhccccC--CCCchH----HHHHHHHHH-hc--c
Confidence 999999999 99999999744 36789 8999999999999999883211 100011 11112 234 56 7
Q ss_pred ccCChhhhhchHHHHHHHHHH
Q 021221 199 WARSPENLLQQETYLALATAF 219 (316)
Q Consensus 199 w~~~~~~~l~~~~~~~lA~~f 219 (316)
||.+++++ .+..++++...
T Consensus 155 ~~~~~~~~--~~~~~~~~~~l 173 (248)
T 2c0g_A 155 PDAEQLKL--IEKLQAKQEQL 173 (248)
T ss_dssp CHHHHHHH--HHHHHHHHHHC
T ss_pred cchhHHHH--HHHHHHHHHHc
Confidence 88888888 67777766553
No 95
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.70 E-value=9.5e-17 Score=129.20 Aligned_cols=102 Identities=21% Similarity=0.269 Sum_probs=80.1
Q ss_pred CcceEEeCCcccHHHHHhHHhcc--CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCC
Q 021221 57 DIVGVIEGDEVSLQMALNMVHKN--SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVH 134 (316)
Q Consensus 57 ~~v~~l~~~~~~~~~~~~~i~~~--~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~ 134 (316)
+.+..++.++ |++. +.+ .+++++|+|||+||++|+.+.|.|+++++.|+++.++ .+|++... ++|+|.
T Consensus 10 g~v~~i~~~~--~~~~----v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~v~~~-~vd~~~~~---~~~~i~ 79 (135)
T 2dbc_A 10 GELREISGNQ--YVNE----VTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPETKFV-KAIVNSCI---EHYHDN 79 (135)
T ss_dssp CSCEECCHHH--HHHH----TTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSSEEEE-EECCSSSC---SSCCSS
T ss_pred CceEEcCHHH--HHHH----HHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCcEEE-EEEhhcCc---ccCCCC
Confidence 3344444333 6665 332 3479999999999999999999999999999765444 44555543 789999
Q ss_pred ccceEEEE-eCceeEEEeCCC-------CHHHHHHHHHHhhC
Q 021221 135 GFPTLFLL-NSSMRVRYHGSR-------TLDSLVAFYSDVTA 168 (316)
Q Consensus 135 ~~Pti~l~-~g~~~~~~~G~~-------~~~~l~~fi~~~~~ 168 (316)
++||+++| +|+.+.++.|.. +.++|.++|.++..
T Consensus 80 ~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~~~ 121 (135)
T 2dbc_A 80 CLPTIFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEVGA 121 (135)
T ss_dssp CCSEEEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHHTS
T ss_pred CCCEEEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHcCC
Confidence 99999999 899999999976 78999999998754
No 96
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.70 E-value=7e-17 Score=157.25 Aligned_cols=132 Identities=21% Similarity=0.348 Sum_probs=106.0
Q ss_pred CCchhHHHHHHhhhcCCCcccc------CCCCCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHH
Q 021221 31 CPTESVTDSIFRFQDSFCPISC------NDFQDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFS 104 (316)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~ 104 (316)
...+.+.+|+..+..|+..|.. .....++..+++++ |++. +.+.+++++|+||||||++|+.+.|.|+
T Consensus 326 ~~~~~l~~f~~~~~~g~~~p~~~s~~~p~~~~~~v~~l~~~~--f~~~----v~~~~k~vlv~F~a~wC~~C~~~~p~~~ 399 (504)
T 2b5e_A 326 LESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKN--HDEI----VNDPKKDVLVLYYAPWCGHCKRLAPTYQ 399 (504)
T ss_dssp CCHHHHHHHHHHHHHTCCCCCCCCCCCCCCCSCSEEEECTTT--HHHH----HHCTTCCEEEEEECTTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCChhhhcCCCCccccccceeccccc--HHHh----hccCCCCEEEEEECCCChhHHHHhHHHH
Confidence 4567888899999999887643 22345688888888 6665 5667899999999999999999999999
Q ss_pred HHHHHcC-C--CcEEEEEeCCCChhhHhhcCCCccceEEEE-eCce--eEEEeCCCCHHHHHHHHHHhhCCC
Q 021221 105 VLSSLYS-S--IPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSM--RVRYHGSRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 105 ~la~~~~-~--~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~--~~~~~G~~~~~~l~~fi~~~~~~~ 170 (316)
++++.++ + .+.+...|++.+... . |+|+++||+++| +|+. +.+|.|.++.++|.+||+++....
T Consensus 400 ~l~~~~~~~~~~v~~~~vd~~~~~~~-~-~~v~~~Pt~~~~~~G~~~~~~~~~G~~~~~~l~~~i~~~~~~~ 469 (504)
T 2b5e_A 400 ELADTYANATSDVLIAKLDHTENDVR-G-VVIEGYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKENGHFD 469 (504)
T ss_dssp HHHHHHHHHCSSCEEEEEEGGGCCCS-S-CCCSSSSEEEEECCTTSCCCCBCCSCCCHHHHHHHHHHHCTTC
T ss_pred HHHHHhhccCCcEEEEEecCCccccc-c-CCceecCeEEEEeCCceecceEecCCCCHHHHHHHHHhcCCCC
Confidence 9999886 2 344555566655433 4 999999999999 7776 788999999999999999997743
No 97
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.70 E-value=5.1e-17 Score=129.79 Aligned_cols=98 Identities=19% Similarity=0.364 Sum_probs=81.9
Q ss_pred HHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHH--HHHHHcCCCcEEEEEeC---CCChhhHhhcCC---CccceEE
Q 021221 69 LQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFS--VLSSLYSSIPHFAIEES---AIRPSILSKYGV---HGFPTLF 140 (316)
Q Consensus 69 ~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~--~la~~~~~~~~v~~~~~---~~~~~l~~~~~I---~~~Pti~ 140 (316)
+++.+... ...+++++|+|||+||++|+.+.|.|+ ++++.+.+...+..+++ +.+++++++|+| .++||++
T Consensus 18 ~~~~~~~~-~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~ 96 (133)
T 3fk8_A 18 VKKALAAG-KRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVV 96 (133)
T ss_dssp HHHHHHHH-HHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEE
T ss_pred HHHHHHHH-HhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEE
Confidence 55554433 246899999999999999999999999 99998855444555566 788999999999 9999999
Q ss_pred EE--eCceeEEEeC-------CCCHHHHHHHHHHhh
Q 021221 141 LL--NSSMRVRYHG-------SRTLDSLVAFYSDVT 167 (316)
Q Consensus 141 l~--~g~~~~~~~G-------~~~~~~l~~fi~~~~ 167 (316)
+| +|+.+.++.| ..+.+++.+|+++..
T Consensus 97 ~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 97 VVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp EECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred EECCCCCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 99 7888889888 679999999998764
No 98
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.52 E-value=1.4e-18 Score=132.30 Aligned_cols=101 Identities=22% Similarity=0.359 Sum_probs=85.1
Q ss_pred eEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceE
Q 021221 60 GVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTL 139 (316)
Q Consensus 60 ~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti 139 (316)
..++.++ +++. +.+++++++|.||++||++|+.+.|.++++++.+++...+...+++.+++++++|+|.++||+
T Consensus 4 ~~l~~~~--~~~~----~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 77 (106)
T 2yj7_A 4 IEVTDEN--FEQE----VLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTL 77 (106)
Confidence 3344445 5544 346789999999999999999999999999999986555555677788999999999999999
Q ss_pred EEE-eCceeEEEeCCCCHHHHHHHHHHh
Q 021221 140 FLL-NSSMRVRYHGSRTLDSLVAFYSDV 166 (316)
Q Consensus 140 ~l~-~g~~~~~~~G~~~~~~l~~fi~~~ 166 (316)
++| +|+.+.++.|..+.++|.+++++.
T Consensus 78 ~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 78 LLFKNGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 999 888888999999999999999865
No 99
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.69 E-value=5.9e-17 Score=118.77 Aligned_cols=83 Identities=17% Similarity=0.292 Sum_probs=74.7
Q ss_pred CeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHHH
Q 021221 82 EYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVA 161 (316)
Q Consensus 82 ~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~ 161 (316)
.+++|.||++||++|+++.|.++++++.+++...+...|.+++++++++|||.++||+++ +|+. ++.|..+.++|.+
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~-~G~~--~~~G~~~~~~l~~ 79 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI-NGDV--EFIGAPTKEALVE 79 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCSSEEEE-TTEE--ECCSSSSSHHHHH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcccCEEEE-CCEE--eeecCCCHHHHHH
Confidence 478999999999999999999999999998666777778888899999999999999999 7766 8899999999999
Q ss_pred HHHHhh
Q 021221 162 FYSDVT 167 (316)
Q Consensus 162 fi~~~~ 167 (316)
+|++.+
T Consensus 80 ~l~~~l 85 (85)
T 1fo5_A 80 AIKKRL 85 (85)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 998753
No 100
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=8.5e-17 Score=127.76 Aligned_cols=103 Identities=18% Similarity=0.288 Sum_probs=82.9
Q ss_pred ccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHH---HHHHHHcCCCcEEEEEeCC--CChhhHhhcCCCccceEEE
Q 021221 67 VSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSF---SVLSSLYSSIPHFAIEESA--IRPSILSKYGVHGFPTLFL 141 (316)
Q Consensus 67 ~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~---~~la~~~~~~~~v~~~~~~--~~~~l~~~~~I~~~Pti~l 141 (316)
.+|++.+... ...+++++|+||++||++|+.+.|.+ +++.+.+.....+...+++ .+.+++++|+|.++||+++
T Consensus 14 ~~~~~~~~~~-~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~ 92 (130)
T 2kuc_A 14 LSFPEALKRA-EVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLLF 92 (130)
T ss_dssp CCHHHHHHHH-HHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSCEEEE
T ss_pred CCHHHHHHHH-HhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCCEEEE
Confidence 3477764332 13578999999999999999999999 7777766543344444555 4678999999999999999
Q ss_pred E--eCceeEEEeCCCCHHHHHHHHHHhhCCC
Q 021221 142 L--NSSMRVRYHGSRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 142 ~--~g~~~~~~~G~~~~~~l~~fi~~~~~~~ 170 (316)
| +|+.+.++.|..+.++|.++|++.+++.
T Consensus 93 ~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 93 INSSGEVVYRLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp ECTTSCEEEEEESCCCHHHHHHHHHHHHSCC
T ss_pred ECCCCcEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 9 6888889999999999999999998854
No 101
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.69 E-value=6.6e-17 Score=118.51 Aligned_cols=82 Identities=13% Similarity=0.233 Sum_probs=74.1
Q ss_pred eEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHHHH
Q 021221 83 YVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAF 162 (316)
Q Consensus 83 ~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~f 162 (316)
..+|.||++||++|+++.|.++++++.+++...+...|.+.+++++++|||.++||+++ +|+. ++.|..+.++|.++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~-~G~~--~~~G~~~~~~l~~~ 79 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI-NGVV--RFVGAPSREELFEA 79 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCSSEEEE-TTTE--EEECSSCCHHHHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceeeCEEEE-CCEE--EEccCCCHHHHHHH
Confidence 46899999999999999999999999998666666778888999999999999999999 8876 88999999999999
Q ss_pred HHHhh
Q 021221 163 YSDVT 167 (316)
Q Consensus 163 i~~~~ 167 (316)
|++.+
T Consensus 80 l~~~l 84 (85)
T 1nho_A 80 INDEM 84 (85)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 99865
No 102
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.68 E-value=2.1e-16 Score=137.45 Aligned_cols=89 Identities=16% Similarity=0.198 Sum_probs=79.3
Q ss_pred cCCCeE-EEEEEcCCChHHHhhhHHHHHHHHHcC----CCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCceeEEEeC
Q 021221 79 NSHEYV-AVLFYASWCPFSRNFRPSFSVLSSLYS----SIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHG 152 (316)
Q Consensus 79 ~~~~~v-lV~Fya~WC~~Ck~~~p~~~~la~~~~----~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~~~~~G 152 (316)
+.++++ +|+|||+||++|+++.|.++++++.++ +.+.+..+|++.+++++++|+|.++||+++| +|+.+.++.|
T Consensus 131 ~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G 210 (226)
T 1a8l_A 131 NIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQVNGEDRVEFEG 210 (226)
T ss_dssp TCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEEETTEEEEEEES
T ss_pred hcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEEeCCceeEEEcC
Confidence 344566 999999999999999999999999987 4566666788889999999999999999999 8888899999
Q ss_pred CCCHHHHHHHHHHhh
Q 021221 153 SRTLDSLVAFYSDVT 167 (316)
Q Consensus 153 ~~~~~~l~~fi~~~~ 167 (316)
.++.++|.++|++.+
T Consensus 211 ~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 211 AYPEKMFLEKLLSAL 225 (226)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhh
Confidence 999999999999875
No 103
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.67 E-value=1.2e-16 Score=128.22 Aligned_cols=88 Identities=18% Similarity=0.331 Sum_probs=75.3
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHH---HHHHHHcCCCcEEEEEeC----CCChhhHhhcCCCccceEEEE--eCcee--E
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSF---SVLSSLYSSIPHFAIEES----AIRPSILSKYGVHGFPTLFLL--NSSMR--V 148 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~---~~la~~~~~~~~v~~~~~----~~~~~l~~~~~I~~~Pti~l~--~g~~~--~ 148 (316)
.+++++|+|||+||++|+.+.|.+ +++++.++++..+.+ ++ +.+.+++++|+|.++||+++| +|+.+ .
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~v-d~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~v~~~ 108 (134)
T 2fwh_A 30 KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQA-NVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQA 108 (134)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTTSEEEEE-ECTTCCHHHHHHHHHTTCCSSSEEEEECTTSCBCGGG
T ss_pred cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCcEEEEE-eCCCCcchHHHHHHHcCCCCCCEEEEECCCCCEeeee
Confidence 489999999999999999999999 999999988555554 55 456789999999999999999 57766 6
Q ss_pred EEeCCCCHHHHHHHHHHhhC
Q 021221 149 RYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 149 ~~~G~~~~~~l~~fi~~~~~ 168 (316)
++.|..+.++|.+++++..+
T Consensus 109 ~~~G~~~~~~l~~~l~~~~~ 128 (134)
T 2fwh_A 109 RVTGFMDAETFSAHLRDRQP 128 (134)
T ss_dssp CBCSCCCHHHHHHHHHHC--
T ss_pred eeeeccCHHHHHHHHHhcCc
Confidence 89999999999999998765
No 104
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.67 E-value=7.5e-16 Score=124.14 Aligned_cols=102 Identities=13% Similarity=0.241 Sum_probs=86.6
Q ss_pred eEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC-CcEEEEEe------------------
Q 021221 60 GVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS-IPHFAIEE------------------ 120 (316)
Q Consensus 60 ~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~-~~~v~~~~------------------ 120 (316)
..++|+.+++.+. .+++++|.||++||++|+.+.|.++++.+.|++ +.++.+.-
T Consensus 15 ~~~~g~~~~~~~~-------~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 87 (148)
T 2b5x_A 15 AWLNGEVTREQLI-------GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAE 87 (148)
T ss_dssp EEESCCCCHHHHT-------TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHH
T ss_pred ccccCcccchhhc-------CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHH
Confidence 5678888666655 679999999999999999999999999999987 44444431
Q ss_pred --------CCCChhhHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 121 --------SAIRPSILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 121 --------~~~~~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
.+.+.+++++|+|.++||++++ +|+.+.++.|..+.++|.++|++.+.
T Consensus 88 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 88 HDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp TTCCSCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHT
T ss_pred cCCCcceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHh
Confidence 2446689999999999999999 78888899999999999999999876
No 105
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.66 E-value=3.5e-17 Score=126.44 Aligned_cols=78 Identities=18% Similarity=0.391 Sum_probs=64.1
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEE-eC--CCChhhHhhcCCCccceEEEEeCceeEEEeCCCCH
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIE-ES--AIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTL 156 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~-~~--~~~~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~ 156 (316)
.+++++|+|||+||++|+++.|.|+++++.++ .+.++ +. +++++++++|+|+++||+++ +|+ .|.|.++.
T Consensus 11 ~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~---~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i-~G~---~~~G~~~~ 83 (106)
T 3kp8_A 11 LRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP---YVECSPNGPGTPQAQECTEAGITSYPTWII-NGR---TYTGVRSL 83 (106)
T ss_dssp HHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC---EEESCTTCTTSCCCHHHHHTTCCSSSEEEE-TTE---EEESCCCH
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC---EEEEecccccchhHHHHHHcCCeEeCEEEE-CCE---EecCCCCH
Confidence 35677999999999999999999999998875 33332 11 15789999999999999877 775 48999999
Q ss_pred HHHHHHHH
Q 021221 157 DSLVAFYS 164 (316)
Q Consensus 157 ~~l~~fi~ 164 (316)
++|.+|+.
T Consensus 84 ~~l~~~~~ 91 (106)
T 3kp8_A 84 EALAVASG 91 (106)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhC
Confidence 99999875
No 106
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.65 E-value=2e-15 Score=123.73 Aligned_cols=107 Identities=15% Similarity=0.198 Sum_probs=87.7
Q ss_pred CCcceE-EeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHh-hhHHHHHHHHHcCC--CcEEEEEe-----------
Q 021221 56 QDIVGV-IEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRN-FRPSFSVLSSLYSS--IPHFAIEE----------- 120 (316)
Q Consensus 56 ~~~v~~-l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~-~~p~~~~la~~~~~--~~~v~~~~----------- 120 (316)
+..+.. ++|+.+++.+. .+++++|+||++||++|+. +.|.++++.+.|++ +.++.+.-
T Consensus 11 ~~~~~~~~~g~~~~l~~~-------~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~ 83 (160)
T 3lor_A 11 ELDVQEWVNHEGLSNEDL-------RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPE 83 (160)
T ss_dssp CCCEEEESSSCCCCHHHH-------TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHH
T ss_pred CcccccccCCCccCHHHh-------CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHH
Confidence 333444 57888888887 6899999999999999999 59999999999986 44444431
Q ss_pred ----------------CCCChh------hHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhhCC
Q 021221 121 ----------------SAIRPS------ILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTAS 169 (316)
Q Consensus 121 ----------------~~~~~~------l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~~ 169 (316)
.+.... ++++|+|.++|+++++ +|+.+.++.|..+.++|.+.|++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 84 ALKVFIDEFGIKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp HHHHHHHHTTCCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCCcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 122334 8999999999999999 688889999999999999999998873
No 107
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.64 E-value=6.9e-17 Score=128.06 Aligned_cols=98 Identities=18% Similarity=0.322 Sum_probs=83.1
Q ss_pred HHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCcee
Q 021221 69 LQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMR 147 (316)
Q Consensus 69 ~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~ 147 (316)
|++.+... ...+++++|+||++||++|+.+.|.++++++.++++.++ .++++.+++++++|+|.++||++++ +|+.+
T Consensus 25 ~~~~l~~~-~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~-~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 102 (130)
T 1wmj_A 25 FDAQMTKA-KEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFL-KVDVDELKEVAEKYNVEAMPTFLFIKDGAEA 102 (130)
T ss_dssp HHHHHHHH-HTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCTTBCCE-ECCTTTSGGGHHHHTCCSSCCCCBCTTTTCC
T ss_pred HHHHHHHH-hhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCCEEE-EEeccchHHHHHHcCCCccceEEEEeCCeEE
Confidence 66664332 236789999999999999999999999999999865444 4577888999999999999999999 88888
Q ss_pred EEEeCCCCHHHHHHHHHHhhCC
Q 021221 148 VRYHGSRTLDSLVAFYSDVTAS 169 (316)
Q Consensus 148 ~~~~G~~~~~~l~~fi~~~~~~ 169 (316)
.++.| .+.++|.++|++.++.
T Consensus 103 ~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 103 DKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp BCCCT-TCTTTHHHHHHHHTSS
T ss_pred EEEeC-CCHHHHHHHHHHHHhc
Confidence 88888 5889999999998874
No 108
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.64 E-value=1.7e-15 Score=120.15 Aligned_cols=105 Identities=15% Similarity=0.302 Sum_probs=85.1
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeC--------------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEES-------------- 121 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~-------------- 121 (316)
+..+..++|+.+++.+. .+++++|.||++||++|+.+.|.++++.+.++++.++.++..
T Consensus 7 ~~~~~~~~g~~~~l~~~-------~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (136)
T 1zzo_A 7 QFSAKTLDGHDFHGESL-------LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYP 79 (136)
T ss_dssp CCEEEBTTSCEEEGGGG-------TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHTT
T ss_pred CcccccCCCCEeeHHHh-------CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHcC
Confidence 33455556777665554 678999999999999999999999999999986555555421
Q ss_pred --------CCChhhHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 122 --------AIRPSILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 122 --------~~~~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
+.+.+++++|+|.++|+++++ +|+.+ ++.|..+.++|.++|++.++
T Consensus 80 ~~~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 80 VKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp CTTSEEEECTTCHHHHHTTCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC-
T ss_pred CCceEEEEcCCcHHHHHcCCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHHhc
Confidence 345789999999999999999 67777 99999999999999998764
No 109
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.64 E-value=3e-16 Score=136.62 Aligned_cols=104 Identities=12% Similarity=0.205 Sum_probs=83.4
Q ss_pred CCcceEE-eCCcccHHHHHhHHhcc--CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcC
Q 021221 56 QDIVGVI-EGDEVSLQMALNMVHKN--SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYG 132 (316)
Q Consensus 56 ~~~v~~l-~~~~~~~~~~~~~i~~~--~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~ 132 (316)
.+.+..+ +.++ |.+. +.+ .+++++|+|||+||++|+.+.|.|+++++.|+++.++.+ +++ +++++.+|+
T Consensus 98 ~g~v~~i~~~~~--f~~~----v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~~v~f~~v-d~~-~~~l~~~~~ 169 (217)
T 2trc_P 98 YGFVYELETGEQ--FLET----IEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPMVKFCKI-RAS-NTGAGDRFS 169 (217)
T ss_dssp CCSEEECCSHHH--HHHH----HHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCTTSEEEEE-EHH-HHTCSTTSC
T ss_pred CCeEEEcCCHHH--HHHH----HHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEE-ECC-cHHHHHHCC
Confidence 3445555 4445 6665 332 358999999999999999999999999999986555544 555 778999999
Q ss_pred CCccceEEEE-eCceeEEEeCCCCH-------HHHHHHHHHhh
Q 021221 133 VHGFPTLFLL-NSSMRVRYHGSRTL-------DSLVAFYSDVT 167 (316)
Q Consensus 133 I~~~Pti~l~-~g~~~~~~~G~~~~-------~~l~~fi~~~~ 167 (316)
|.++||+++| +|+.+.++.|..+. ++|..||.++-
T Consensus 170 i~~~PTl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~g 212 (217)
T 2trc_P 170 SDVLPTLLVYKGGELISNFISVAEQFAEDFFAADVESFLNEYG 212 (217)
T ss_dssp GGGCSEEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTTT
T ss_pred CCCCCEEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHcC
Confidence 9999999999 88888999998775 89999998753
No 110
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.63 E-value=6.2e-16 Score=120.83 Aligned_cols=86 Identities=14% Similarity=0.148 Sum_probs=67.7
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCC-----cEEEEEeCCC--ChhhHhhcCCCccceEEEE-eCceeEEEe
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI-----PHFAIEESAI--RPSILSKYGVHGFPTLFLL-NSSMRVRYH 151 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~-----~~v~~~~~~~--~~~l~~~~~I~~~Pti~l~-~g~~~~~~~ 151 (316)
+...+||+|||+||++|+.+.|.+.. .|+.. ..+..+|.+. .++++.+|+|.++||+++| +|+++.+..
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~---~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~ 93 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAP---QYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLE 93 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTT---TGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEE
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHh---hHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeec
Confidence 45789999999999999999875433 33321 2333334444 3579999999999999999 999999999
Q ss_pred CCCCHHHHHHHHHHhhC
Q 021221 152 GSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 152 G~~~~~~l~~fi~~~~~ 168 (316)
|..+.+.|.+++++.++
T Consensus 94 G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 94 GYPGEDFFWPMLARLIG 110 (116)
T ss_dssp CCCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHh
Confidence 99999999999998765
No 111
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.63 E-value=6.5e-16 Score=136.65 Aligned_cols=105 Identities=11% Similarity=0.175 Sum_probs=82.1
Q ss_pred CCcceEE-eCCcccHHHHHhHHhc--cCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcC
Q 021221 56 QDIVGVI-EGDEVSLQMALNMVHK--NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYG 132 (316)
Q Consensus 56 ~~~v~~l-~~~~~~~~~~~~~i~~--~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~ 132 (316)
.+.|..+ +.++ |.+. +. ..+++|||+|||+||++|+.+.|.|+++++.|+++.++.+ +++. ++++.+|+
T Consensus 111 ~G~V~ei~s~~~--f~~~----v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~v~f~kV-d~d~-~~l~~~~~ 182 (245)
T 1a0r_P 111 YGFVYELESGEQ--FLET----IEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPMVKFCKI-KASN-TGAGDRFS 182 (245)
T ss_dssp CCSEEECCSHHH--HHHH----HHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTTSEEEEE-EHHH-HCCTTSSC
T ss_pred CCeEEEeCCHHH--HHHH----HHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCCEEEEE-eCCc-HHHHHHCC
Confidence 3445444 3444 6555 33 2588999999999999999999999999999998555554 5544 77999999
Q ss_pred CCccceEEEE-eCceeEEEeCC-------CCHHHHHHHHHHhhC
Q 021221 133 VHGFPTLFLL-NSSMRVRYHGS-------RTLDSLVAFYSDVTA 168 (316)
Q Consensus 133 I~~~Pti~l~-~g~~~~~~~G~-------~~~~~l~~fi~~~~~ 168 (316)
|.++||+++| +|+.+.++.|. ++.+.|..||.++--
T Consensus 183 I~~~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g~ 226 (245)
T 1a0r_P 183 SDVLPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEYGL 226 (245)
T ss_dssp TTTCSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTTC
T ss_pred CCCCCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHcCC
Confidence 9999999999 88888888875 356789999988644
No 112
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.63 E-value=1.7e-15 Score=120.31 Aligned_cols=102 Identities=17% Similarity=0.310 Sum_probs=83.5
Q ss_pred CcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCC-------------
Q 021221 57 DIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAI------------- 123 (316)
Q Consensus 57 ~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~------------- 123 (316)
..+..++|+.+++.+. .+++++|.||++||++|+.+.|.++++.+.++++.++.++ .+.
T Consensus 7 ~~l~~~~g~~~~l~~~-------~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~ 78 (136)
T 1lu4_A 7 FTATTLSGAPFDGASL-------QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIA-TRADVGAMQSFVSKYN 78 (136)
T ss_dssp CEEEBTTSCEEEGGGG-------TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEE-CSSCHHHHHHHHHHHT
T ss_pred eEeecCCCCeecHHHh-------CCCEEEEEEECCcChhHHHHHHHHHHHHHHCCCcEEEEEE-cCCCHHHHHHHHHHcC
Confidence 3344556777665554 6789999999999999999999999999999865555553 433
Q ss_pred ---------ChhhHhhcCCCccceEEEE--eCceeEEEe---CCCCHHHHHHHHHHhh
Q 021221 124 ---------RPSILSKYGVHGFPTLFLL--NSSMRVRYH---GSRTLDSLVAFYSDVT 167 (316)
Q Consensus 124 ---------~~~l~~~~~I~~~Pti~l~--~g~~~~~~~---G~~~~~~l~~fi~~~~ 167 (316)
+.+++++|+|.++|+++++ +|+.+ ++. |..+.++|.++|++.+
T Consensus 79 ~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 79 LNFTNLNDADGVIWARYNVPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp CCSEEEECTTSHHHHHTTCCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred CCceEEECCchhHHHhcCCCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 6789999999999999999 67777 899 9999999999998764
No 113
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.62 E-value=2.8e-15 Score=123.37 Aligned_cols=107 Identities=19% Similarity=0.281 Sum_probs=87.1
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCC-cEEEEEeCCCChhhHhhc---
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI-PHFAIEESAIRPSILSKY--- 131 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~-~~v~~~~~~~~~~l~~~~--- 131 (316)
+..+..++|+.+++.+. .+++++|.||++||++|+.+.|.++++.+.|++. +.+..++++...+..++|
T Consensus 16 ~~~l~~~~g~~~~l~~~-------~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~ 88 (165)
T 3or5_A 16 SFSGVTVDGKPFSSASL-------KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKT 88 (165)
T ss_dssp CCEEECTTSCEEEGGGG-------TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHH
T ss_pred CceeeCCCCCEechhHc-------CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHH
Confidence 44456667788776665 6799999999999999999999999999999863 344444555656666655
Q ss_pred ------------------------CCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhhCC
Q 021221 132 ------------------------GVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTAS 169 (316)
Q Consensus 132 ------------------------~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~~ 169 (316)
+|.++|+++++ +|+.+.++.|..+.++|.++|++.++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 152 (165)
T 3or5_A 89 QGIIYPVMMATPELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGA 152 (165)
T ss_dssp HTCCSCEEECCHHHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC-
T ss_pred cCCCCceEecCHHHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 89999999999 788888999999999999999999873
No 114
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.62 E-value=6.8e-16 Score=128.81 Aligned_cols=99 Identities=11% Similarity=0.191 Sum_probs=74.8
Q ss_pred cHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHH---HHHHHHcCC-CcEEEEEeCCCChhh----------------
Q 021221 68 SLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSF---SVLSSLYSS-IPHFAIEESAIRPSI---------------- 127 (316)
Q Consensus 68 ~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~---~~la~~~~~-~~~v~~~~~~~~~~l---------------- 127 (316)
+|++.+... ...+++++|+|||+||++|+.+.+.+ .++.+.+.+ +..+.+ +.+...++
T Consensus 35 ~~~~~~~~a-~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v-~~d~~~~~~~~~~~~~~~~~~~~~ 112 (172)
T 3f9u_A 35 DYDLGMEYA-RQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITL-YVDNKTPLTEPVKIMENGTERTLR 112 (172)
T ss_dssp CHHHHHHHH-HHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEE-ETTCCCEEEEEEEEEETTEEEEEE
T ss_pred hHHHHHHHH-HHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEE-ecCcccccchhhhhhhcchhhhhh
Confidence 377764433 35789999999999999999984443 445544443 444444 55555444
Q ss_pred ----------HhhcCCCccceEEEE--eCceeEEEeCCCC-HHHHHHHHHHhhC
Q 021221 128 ----------LSKYGVHGFPTLFLL--NSSMRVRYHGSRT-LDSLVAFYSDVTA 168 (316)
Q Consensus 128 ----------~~~~~I~~~Pti~l~--~g~~~~~~~G~~~-~~~l~~fi~~~~~ 168 (316)
.++|+|.++||++++ +|+.+.++.|..+ .+++.++|++.+.
T Consensus 113 ~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 113 TVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp EHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHH
Confidence 789999999999999 7888889999998 9999999998764
No 115
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.62 E-value=1.1e-15 Score=120.72 Aligned_cols=85 Identities=16% Similarity=0.174 Sum_probs=70.3
Q ss_pred CCCeEEEEEEcC-------CChHHHhhhHHHHHHHHHcCCCcEEEEEeC-------CCChhhHhhcCCCccceEEEE-eC
Q 021221 80 SHEYVAVLFYAS-------WCPFSRNFRPSFSVLSSLYSSIPHFAIEES-------AIRPSILSKYGVHGFPTLFLL-NS 144 (316)
Q Consensus 80 ~~~~vlV~Fya~-------WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~-------~~~~~l~~~~~I~~~Pti~l~-~g 144 (316)
.+++++|+|||+ ||++|+.+.|.++++++.+++...+..++. +.+++++++|+|.++||+++| ++
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~~~~i~~~Pt~~~~~~~ 102 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYGTP 102 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHHHHCCCSSSEEEETTSS
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHHHCCCCeeCEEEEEcCC
Confidence 589999999999 999999999999999999976555555566 678899999999999999999 54
Q ss_pred ceeEEEeCCCCHHHHHHHHHH
Q 021221 145 SMRVRYHGSRTLDSLVAFYSD 165 (316)
Q Consensus 145 ~~~~~~~G~~~~~~l~~fi~~ 165 (316)
.....+.| .+.+.|.+||++
T Consensus 103 ~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 103 QKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp CEEEGGGG-GCHHHHHHHHHC
T ss_pred ceEecccc-CCHHHHHHHHhc
Confidence 44443444 478889998874
No 116
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.61 E-value=1.2e-16 Score=152.91 Aligned_cols=97 Identities=23% Similarity=0.340 Sum_probs=76.9
Q ss_pred CCcceEEeCCcccHHHHHhHHhc-cCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--------CcEEEEEeCCCChh
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHK-NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--------IPHFAIEESAIRPS 126 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~-~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--------~~~v~~~~~~~~~~ 126 (316)
+..+..++.++ |++. +. +.+++++|+|||+||++|+.+.|.|+++++.|++ .+.+..+|++.+++
T Consensus 22 ~~~V~~Lt~~~--F~~~----l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~ 95 (470)
T 3qcp_A 22 DSSVVDLSGDD--FSRV----HRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVD 95 (470)
T ss_dssp CTTEEECSCSC--GGGT----CTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHH
T ss_pred CCCcEECCHHH--HHHH----HHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHH
Confidence 44566666666 6655 32 3458999999999999999999999999999972 36777779999999
Q ss_pred hHhhcCCCccceEEEE-eCc--eeEEEeCCCCHHH
Q 021221 127 ILSKYGVHGFPTLFLL-NSS--MRVRYHGSRTLDS 158 (316)
Q Consensus 127 l~~~~~I~~~Pti~l~-~g~--~~~~~~G~~~~~~ 158 (316)
++++|+|.++||+++| +|+ .+.+|.|.++.+.
T Consensus 96 la~~y~V~~~PTlilf~~gg~~~~~~y~G~r~~e~ 130 (470)
T 3qcp_A 96 LCRKYDINFVPRLFFFYPRDSCRSNEECGTSSLEH 130 (470)
T ss_dssp HHHHTTCCSSCEEEEEEESSCCCTTSCCCCCCEEE
T ss_pred HHHHcCCCccCeEEEEECCCceEEEEeeCCCCHHH
Confidence 9999999999999999 443 3567777655443
No 117
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.61 E-value=5.9e-15 Score=120.76 Aligned_cols=106 Identities=12% Similarity=0.197 Sum_probs=84.8
Q ss_pred CcceEE--eCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhh-hHHHHHHHHHcCC--CcEEEEEe-----------
Q 021221 57 DIVGVI--EGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNF-RPSFSVLSSLYSS--IPHFAIEE----------- 120 (316)
Q Consensus 57 ~~v~~l--~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~-~p~~~~la~~~~~--~~~v~~~~----------- 120 (316)
..+..+ +|+.+++.+. .+++++|+||++||++|+.+ .|.++++.++|++ +.++.+.-
T Consensus 9 f~l~~~~~~g~~~~l~~~-------~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~ 81 (158)
T 3eyt_A 9 LQIQQWFNSATDLTLADL-------RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPI 81 (158)
T ss_dssp CCEEEEESCSSCCCTGGG-------TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHH
T ss_pred ceehhhhcCCCccCHHHh-------CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHH
Confidence 334443 5677776666 68999999999999999996 9999999999974 44444431
Q ss_pred ----------------CCCCh-----hhHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhhCC
Q 021221 121 ----------------SAIRP-----SILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTAS 169 (316)
Q Consensus 121 ----------------~~~~~-----~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~~ 169 (316)
.+... .+++.|+|.++|+++++ +|+.+.++.|..+.++|.+.|++.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 82 SLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp HHHHHHHHTTCCSCEEEECCCSSSSCHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcCCCceEEEcCccchhhHHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 11122 58999999999999999 788888999999999999999999873
No 118
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.61 E-value=4.7e-15 Score=120.59 Aligned_cols=108 Identities=15% Similarity=0.180 Sum_probs=89.3
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEE--------------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIE-------------- 119 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~-------------- 119 (316)
+..+..++|+.+++.+. .+++++|.||++||++|+.+.|.++++.+.|++ +.++.+.
T Consensus 10 ~~~l~~~~g~~~~l~~~-------~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~ 82 (153)
T 2l5o_A 10 AFSLPDLHGKTVSNADL-------QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVK 82 (153)
T ss_dssp SCEEECTTSCEEEHHHH-------TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHH
T ss_pred CcEeecCCCCCccHHHh-------CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHH
Confidence 44455567888888777 679999999999999999999999999999875 3444432
Q ss_pred --------eCCCChhhHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhhCCC
Q 021221 120 --------ESAIRPSILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 120 --------~~~~~~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~~~ 170 (316)
..+.+..+++.|+|.++|+++++ +|+.+.++.|..+.++|.++|++.+...
T Consensus 83 ~~~~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~ 143 (153)
T 2l5o_A 83 DYGLPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRNS 143 (153)
T ss_dssp HTTCCSEEEECSSCHHHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHCC
T ss_pred HcCCCceEEcCchHHHHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHhh
Confidence 23456789999999999999999 7888889999999999999999988743
No 119
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.61 E-value=3.1e-15 Score=121.66 Aligned_cols=106 Identities=17% Similarity=0.289 Sum_probs=85.7
Q ss_pred CcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeCCC-----------
Q 021221 57 DIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAI----------- 123 (316)
Q Consensus 57 ~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~~~----------- 123 (316)
..+...+|+.+++.+. .+++++|+||++||++|+.+.|.++++.+.|++ +.++.+. .+.
T Consensus 9 ~~l~~~~g~~~~l~~~-------~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~-~d~~~~~~~~~~~~ 80 (151)
T 2f9s_A 9 FVLEDTNGKRIELSDL-------KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVN-VGESKIAVHNFMKS 80 (151)
T ss_dssp CEEECTTCCEEEGGGG-------TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEE-ESCCHHHHHHHHHH
T ss_pred ceeEcCCCCEEEHHHc-------CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEE-CCCCHHHHHHHHHH
Confidence 3344456777666665 679999999999999999999999999999875 4444443 322
Q ss_pred -----------ChhhHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhhCCC
Q 021221 124 -----------RPSILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 124 -----------~~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~~~ 170 (316)
+..+++.|+|.++||++++ +|+.+.++.|..+.++|.++|++.+...
T Consensus 81 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 81 YGVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp HTCCSCEEEETTSHHHHHTTCCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC-
T ss_pred cCCCceEEECCchHHHHhcCCCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhh
Confidence 4579999999999999999 7888889999999999999999988743
No 120
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.60 E-value=3.9e-15 Score=131.32 Aligned_cols=99 Identities=14% Similarity=0.203 Sum_probs=82.7
Q ss_pred cceEEeCCcccHHHHHhHHhccCCCeEEEEEEc--CCChHHHhhhHHHHHHHHHcCC--CcEEEEEe-----CCCChhhH
Q 021221 58 IVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYA--SWCPFSRNFRPSFSVLSSLYSS--IPHFAIEE-----SAIRPSIL 128 (316)
Q Consensus 58 ~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya--~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~-----~~~~~~l~ 128 (316)
.+..++..+ |++. + +.+++|+|+||| |||+ +.|.|+++++.+.+ .+.++.+| |+.++++|
T Consensus 6 ~v~~Lt~~n--F~~~----i-~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~ 74 (240)
T 2qc7_A 6 GALPLDTVT--FYKV----I-PKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELS 74 (240)
T ss_dssp TCEECCTTH--HHHH----G-GGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHH
T ss_pred CceECCHHH--HHHH----H-cCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHH
Confidence 345555555 7776 3 467899999999 9999 99999999999863 45666666 55689999
Q ss_pred hhcCCC--ccceEEEE-eCc--eeEEEeCCCCHHHHHHHHHHhh
Q 021221 129 SKYGVH--GFPTLFLL-NSS--MRVRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 129 ~~~~I~--~~Pti~l~-~g~--~~~~~~G~~~~~~l~~fi~~~~ 167 (316)
++|+|+ ++||+++| +|+ .+.+|.|.++.++|.+||++++
T Consensus 75 ~~~~V~~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 75 EKYKLDKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp HHTTCCGGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred HHcCCCCCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 999999 99999999 776 5789999999999999999986
No 121
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.60 E-value=3.5e-15 Score=122.66 Aligned_cols=97 Identities=18% Similarity=0.360 Sum_probs=77.2
Q ss_pred HHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHH---HHHHHHc-CCCcEEEEEeCCCC-----------hhhHhhcC
Q 021221 69 LQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSF---SVLSSLY-SSIPHFAIEESAIR-----------PSILSKYG 132 (316)
Q Consensus 69 ~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~---~~la~~~-~~~~~v~~~~~~~~-----------~~l~~~~~ 132 (316)
+++.++.. ...+++++|+|| |+||++|+.+.|.+ .++.+.+ .++..+.+ |.+.. .+++++|+
T Consensus 36 ~~~~~~~a-~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~v-d~~~~~~~~~~~~~~~~~l~~~~~ 113 (154)
T 2ju5_A 36 YAEALEHS-KQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEV-DFPQKNHQPEEQRQKNQELKAQYK 113 (154)
T ss_dssp HHHHHHHH-HHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEE-ECCSSCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHH-HhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEe-cCccccCCChhhHhhHHHHHHHcC
Confidence 55543332 235789999999 99999999999999 7777665 34555555 44433 48999999
Q ss_pred CCccceEEEE--eCceeEEEeCCC--CHHHHHHHHHHhhC
Q 021221 133 VHGFPTLFLL--NSSMRVRYHGSR--TLDSLVAFYSDVTA 168 (316)
Q Consensus 133 I~~~Pti~l~--~g~~~~~~~G~~--~~~~l~~fi~~~~~ 168 (316)
|.++||++++ +|+.+.++ |.. +.+++.++|++.++
T Consensus 114 v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 114 VTGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp CCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred CCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 9999999999 78888888 988 89999999998876
No 122
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.60 E-value=4.8e-15 Score=131.12 Aligned_cols=87 Identities=14% Similarity=0.199 Sum_probs=76.2
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcC----CCcEEEEEeCCCChhhHhhcCCCccceEEEEeCceeEEEeCCCC
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS----SIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRT 155 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~----~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~ 155 (316)
.++.+++.|||||||+|+++.|.|++++..++ +.+.+..+|++.+++++++|+|+++||+++ +|+. .|.|.++
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i-~G~~--~~~G~~~ 213 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI-NGYL--VFVGVPY 213 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE-TTEE--EEESCCC
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE-CCEE--EEeCCCC
Confidence 46778999999999999999999999999882 335566678889999999999999999988 7764 3999999
Q ss_pred HHHHHHHHHHhhCC
Q 021221 156 LDSLVAFYSDVTAS 169 (316)
Q Consensus 156 ~~~l~~fi~~~~~~ 169 (316)
.++|.++|++.++.
T Consensus 214 ~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 214 EEDFLDYVKSAAEG 227 (243)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999999874
No 123
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.60 E-value=2.8e-15 Score=123.36 Aligned_cols=104 Identities=14% Similarity=0.229 Sum_probs=82.9
Q ss_pred cceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcC--CCcEEEEE----------------
Q 021221 58 IVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS--SIPHFAIE---------------- 119 (316)
Q Consensus 58 ~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~--~~~~v~~~---------------- 119 (316)
.+..++|+.+++.+. .+++++|+||++||++|+.+.|.++++++.|. ++.++.+.
T Consensus 22 ~l~~~~g~~~~~~~~-------~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~ 94 (164)
T 2h30_A 22 TMKTADNRPASVYLK-------KDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKW 94 (164)
T ss_dssp TCEETTSSBGGGGCC-------TTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHH
T ss_pred ccCCCCCCEeeHHHh-------CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHH
Confidence 345567777444333 67899999999999999999999999998863 33333332
Q ss_pred -----------eCCCChhhHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 120 -----------ESAIRPSILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 120 -----------~~~~~~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
+.+.+.+++++|+|.++||++++ +|+.+.++.|..+.++|.++|++.+.
T Consensus 95 ~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 95 YAGLNYPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp HTTSCCTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred HHhCCCCcceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 23345689999999999999999 78888899999999999999998876
No 124
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.59 E-value=6e-15 Score=116.73 Aligned_cols=103 Identities=17% Similarity=0.268 Sum_probs=83.4
Q ss_pred CcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC-CcEEEEEe---------------
Q 021221 57 DIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS-IPHFAIEE--------------- 120 (316)
Q Consensus 57 ~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~-~~~v~~~~--------------- 120 (316)
..+...+|+.+++.+. .+++++|+||++||++|+.+.|.++++.+.+++ +..+.++.
T Consensus 5 f~l~~~~g~~~~l~~~-------~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~ 77 (138)
T 4evm_A 5 FELMGVDGKTYRLSDY-------KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNW 77 (138)
T ss_dssp CEEEBTTSCEEEGGGG-------TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHH
T ss_pred ceeECCCCCEEEHHHh-------CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHH
Confidence 3445556777666655 679999999999999999999999999999875 44444421
Q ss_pred ------------CCCChhhHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHh
Q 021221 121 ------------SAIRPSILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDV 166 (316)
Q Consensus 121 ------------~~~~~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~ 166 (316)
.+.+..++++|+|.++|+++++ +|+.+.++.|..+.++|.++|++.
T Consensus 78 ~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 78 YKGLDYKNLPVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp HTTCCCTTCCEEECTTCHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred HhhcCCCCeeEEECcchHHHHHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 1335679999999999999999 788889999999999999999864
No 125
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.59 E-value=5.6e-15 Score=128.82 Aligned_cols=86 Identities=9% Similarity=0.186 Sum_probs=75.6
Q ss_pred CCCeE-EEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEEeCceeEEEeCCCCHHH
Q 021221 80 SHEYV-AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDS 158 (316)
Q Consensus 80 ~~~~v-lV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~ 158 (316)
.++++ +|+|||+||++|+.+.|.++++++.+++ +.+..+|++.+++++++|+|+++||+++ +|+ +.++.|.++.++
T Consensus 134 ~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~-~G~-~~~~~G~~~~~~ 210 (229)
T 2ywm_A 134 VDIPIEIWVFVTTSCGYCPSAAVMAWDFALANDY-ITSKVIDASENQDLAEQFQVVGVPKIVI-NKG-VAEFVGAQPENA 210 (229)
T ss_dssp CCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCTT-EEEEEEEGGGCHHHHHHTTCCSSSEEEE-GGG-TEEEESCCCHHH
T ss_pred cCCCeEEEEEECCCCcchHHHHHHHHHHHHHCCC-eEEEEEECCCCHHHHHHcCCcccCEEEE-CCE-EEEeeCCCCHHH
Confidence 44455 8899999999999999999999999954 5556668888999999999999999998 888 778999999999
Q ss_pred HHHHHHHhhC
Q 021221 159 LVAFYSDVTA 168 (316)
Q Consensus 159 l~~fi~~~~~ 168 (316)
|.++|++.++
T Consensus 211 l~~~l~~~~~ 220 (229)
T 2ywm_A 211 FLGYIMAVYE 220 (229)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999998875
No 126
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.59 E-value=3.8e-15 Score=121.36 Aligned_cols=105 Identities=17% Similarity=0.330 Sum_probs=87.6
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeC--------------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEES-------------- 121 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~-------------- 121 (316)
+..+...+|+.+++.+. . ++++|.||++||++|+.+.|.++++.+.| ++.++.+...
T Consensus 13 ~f~l~~~~g~~~~l~~~-------~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~v~~v~v~~d~~~~~~~~~~~~~~ 83 (154)
T 3ia1_A 13 DFLLLDPKGQPVTPATV-------S-KPAVIVFWASWCTVCKAEFPGLHRVAEET-GVPFYVISREPRDTREVVLEYMKT 83 (154)
T ss_dssp CCCEECTTSCEECTTTS-------C-SSEEEEEECTTCHHHHHHHHHHHHHHHHH-CCCEEEEECCTTCCHHHHHHHHTT
T ss_pred ceEEECCCCCEechHHc-------C-CeEEEEEEcccChhHHHHHHHHHHHHHHc-CCeEEEEeCCCcccHHHHHHHHHH
Confidence 44455567777666655 4 89999999999999999999999999999 7666665430
Q ss_pred ------------CCChhhHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhhCC
Q 021221 122 ------------AIRPSILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTAS 169 (316)
Q Consensus 122 ------------~~~~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~~ 169 (316)
+....++++|+|.++|+++++ +|+.+.++.|..+.++|.++|++..+.
T Consensus 84 ~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~ 145 (154)
T 3ia1_A 84 YPRFIPLLASDRDRPHEVAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAGAD 145 (154)
T ss_dssp CTTEEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCC
T ss_pred cCCCcccccccccchHHHHHHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCc
Confidence 245788999999999999999 788889999999999999999999874
No 127
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.59 E-value=5.4e-15 Score=120.39 Aligned_cols=100 Identities=19% Similarity=0.218 Sum_probs=82.8
Q ss_pred EeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeCC-----------------
Q 021221 62 IEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESA----------------- 122 (316)
Q Consensus 62 l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~~----------------- 122 (316)
.+|+.+++.+. .+++++|+|||+||++|+.+.|.++++++.|.+ +.++.+ +.+
T Consensus 12 ~~G~~~~l~~~-------~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v-~~d~~~~~~~~~~~~~~~~~ 83 (151)
T 3raz_A 12 KDNTPQSLQSL-------KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGI-ALDTSDNIGNFLKQTPVSYP 83 (151)
T ss_dssp TTCCEECGGGC-------CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEE-ESSCHHHHHHHHHHSCCSSC
T ss_pred cCCCEecHHHh-------CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEE-ECCChHHHHHHHHHcCCCCc
Confidence 46777666665 689999999999999999999999999999854 344444 332
Q ss_pred -------CChhhHhhcC--CCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhhCC
Q 021221 123 -------IRPSILSKYG--VHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTAS 169 (316)
Q Consensus 123 -------~~~~l~~~~~--I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~~ 169 (316)
....+++.|| |.++|+++++ +|+.+.++.|..+.++|.++|++....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~ 141 (151)
T 3raz_A 84 IWRYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSK 141 (151)
T ss_dssp EEEECCSCHHHHHHTTTCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC
T ss_pred eEecCccchHHHHHHhCCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 2356888999 9999999999 788899999999999999999998774
No 128
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.37 E-value=1e-16 Score=127.40 Aligned_cols=92 Identities=21% Similarity=0.294 Sum_probs=76.7
Q ss_pred ccCCCeEEEEEEcCCChHHHhhhHHH---HHHHHHcCCCcEEEEEeC--CCChhhHhhcCCCccceEEEE--e-Cce--e
Q 021221 78 KNSHEYVAVLFYASWCPFSRNFRPSF---SVLSSLYSSIPHFAIEES--AIRPSILSKYGVHGFPTLFLL--N-SSM--R 147 (316)
Q Consensus 78 ~~~~~~vlV~Fya~WC~~Ck~~~p~~---~~la~~~~~~~~v~~~~~--~~~~~l~~~~~I~~~Pti~l~--~-g~~--~ 147 (316)
...+++++|+|||+||++|+.+.|.+ +++++.+++...+..+++ +.+.+++++|+|.++||+++| + |+. +
T Consensus 16 ~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~ 95 (130)
T 2lst_A 16 QAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEEV 95 (130)
Confidence 34678999999999999999999999 999988876333333344 456889999999999999999 3 666 7
Q ss_pred EEEeCCCCHHHHHHHHHHhhCC
Q 021221 148 VRYHGSRTLDSLVAFYSDVTAS 169 (316)
Q Consensus 148 ~~~~G~~~~~~l~~fi~~~~~~ 169 (316)
.++.|..+.++|.++|++.++.
T Consensus 96 ~~~~G~~~~~~l~~~l~~~~~~ 117 (130)
T 2lst_A 96 GRLFGSRPRAEFLKELRQVCVK 117 (130)
Confidence 8899999999999999998873
No 129
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.58 E-value=6.8e-15 Score=119.50 Aligned_cols=105 Identities=18% Similarity=0.326 Sum_probs=84.8
Q ss_pred cceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeCCCC-----------
Q 021221 58 IVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAIR----------- 124 (316)
Q Consensus 58 ~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~~~~----------- 124 (316)
.+...+|+.+++.+. .+++++|.||++||++|+.+.|.++++.+.+++ +.++.+ +.+..
T Consensus 14 ~l~~~~g~~~~l~~~-------~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v-~~d~~~~~~~~~~~~~ 85 (152)
T 2lja_A 14 SYPDINGKTVSLADL-------KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSL-SCDKNKKAWENMVTKD 85 (152)
T ss_dssp EEEETTTEEEESTTT-------TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEE-ECCSCHHHHHHHHHHH
T ss_pred EeecCCCCEeeHHHc-------CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEE-EccCcHHHHHHHHHhc
Confidence 344556677665554 679999999999999999999999999999976 334443 44433
Q ss_pred ------------hhhHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhhCCC
Q 021221 125 ------------PSILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 125 ------------~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~~~ 170 (316)
..+++.|+|.++|+++++ +|+.+.++.|..+.++|.++|++..+..
T Consensus 86 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 86 QLKGIQLHMGTDRTFMDAYLINGIPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp TCCSEEEECSSCTHHHHHTTCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTCC
T ss_pred CCCCceeecCcchhHHHHcCcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhccc
Confidence 378999999999999999 6788888889889999999999998854
No 130
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.57 E-value=8.3e-15 Score=117.43 Aligned_cols=102 Identities=11% Similarity=0.157 Sum_probs=85.8
Q ss_pred eCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCc--cceEE
Q 021221 63 EGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHG--FPTLF 140 (316)
Q Consensus 63 ~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~--~Pti~ 140 (316)
+.+..+|++. .+.+.+++|+|||+ |++|+.+.|.+++++++|.+...+..+|.+++++++++|||++ +||++
T Consensus 10 ~~t~~~f~~~-----~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl~ 83 (133)
T 2djk_A 10 EIGPETYSDY-----MSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAFA 83 (133)
T ss_dssp ECCHHHHHHH-----HHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSSSEEE
T ss_pred ccChHHHHHH-----hcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccCCEEE
Confidence 3344446655 24678999999999 8999999999999999999888888889999999999999999 99999
Q ss_pred EE-e-CceeEEEe--CCCCHHHHHHHHHHhhCCC
Q 021221 141 LL-N-SSMRVRYH--GSRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 141 l~-~-g~~~~~~~--G~~~~~~l~~fi~~~~~~~ 170 (316)
+| + ++...++. |..+.+.|.+|+++.+..+
T Consensus 84 i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gk 117 (133)
T 2djk_A 84 IQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGK 117 (133)
T ss_dssp EECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTC
T ss_pred EEecCcCcccCCCCccccCHHHHHHHHHHHHcCC
Confidence 99 4 23335665 9999999999999988643
No 131
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.57 E-value=2.8e-15 Score=120.89 Aligned_cols=105 Identities=15% Similarity=0.197 Sum_probs=83.1
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCC-cEEEEEeCCCChh--------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI-PHFAIEESAIRPS-------- 126 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~-~~v~~~~~~~~~~-------- 126 (316)
+..+..++|+.+++.+. .+++++|.||++||++|+.+.|.++++.+.|++. ..+..++.+...+
T Consensus 13 ~~~l~~~~g~~~~l~~~-------~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~ 85 (148)
T 3hcz_A 13 NLYMTDTTGTYRYLYDV-------QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRS 85 (148)
T ss_dssp CCCCBCTTSCBCCGGGC-------CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHH
T ss_pred ceEEecCCCCEEEhHHc-------CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHH
Confidence 34455567777666655 6799999999999999999999999999998763 3333334454444
Q ss_pred -----------------hHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhh
Q 021221 127 -----------------ILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 127 -----------------l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~ 167 (316)
+++.|+|.++|+++++ +|+.+.++.|..+.+++.+.+.+.+
T Consensus 86 ~~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 86 KKIGGWLNVRDSKNHTDFKITYDIYATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp HTCTTSEEEECTTCCCCHHHHHCCCSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHHH
T ss_pred cCCCCceEEeccccchhHHHhcCcCCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHHh
Confidence 9999999999999999 7888888888877888877776654
No 132
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.57 E-value=1.6e-14 Score=117.26 Aligned_cols=106 Identities=23% Similarity=0.314 Sum_probs=83.4
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeCCCCh--------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAIRP-------- 125 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~~~~~-------- 125 (316)
+..+.. +++.+++.+. .+++++|.||++||++|+.+.|.++++.+.|++ +.++.+ +.+...
T Consensus 11 ~f~l~~-~g~~~~l~~~-------~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v-~~d~~~~~~~~~~~ 81 (152)
T 3gl3_A 11 DFALPG-KTGVVKLSDK-------TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAV-NLDAKTGDAMKFLA 81 (152)
T ss_dssp CCEEEB-SSSEEEGGGG-------TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEE-ECCSSHHHHHHHHH
T ss_pred ceEeeC-CCCeEeHHHh-------CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEE-ECCCCHHHHHHHHH
Confidence 344455 6777666665 678999999999999999999999999999876 344444 443333
Q ss_pred --------------hhHhhcCCCccceEEEE--eCceeEEEeCCC--CHHHHHHHHHHhhCCC
Q 021221 126 --------------SILSKYGVHGFPTLFLL--NSSMRVRYHGSR--TLDSLVAFYSDVTASL 170 (316)
Q Consensus 126 --------------~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~--~~~~l~~fi~~~~~~~ 170 (316)
.+++.|+|.++|+++++ +|+.+.++.|.. +.++|.++|++..+..
T Consensus 82 ~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 82 QVPAEFTVAFDPKGQTPRLYGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGGN 144 (152)
T ss_dssp HSCCCSEEEECTTCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC--
T ss_pred HcCCCCceeECCcchhHHHcCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHccc
Confidence 68899999999999999 788888999865 5589999999998743
No 133
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.57 E-value=6.8e-15 Score=105.81 Aligned_cols=74 Identities=9% Similarity=0.204 Sum_probs=61.8
Q ss_pred EEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEEeCceeEEEeCCC-CHHHHHHH
Q 021221 84 VAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSR-TLDSLVAF 162 (316)
Q Consensus 84 vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~-~~~~l~~f 162 (316)
..|+|||+||++|+.+.|.++++++.+++...+..++ +.+++++|||+++||+++ +|+.+.+ |.. +.++|.++
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v~~~Pt~~~-~G~~~~~--G~~~~~~~l~~~ 75 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---EMDQILEAGLTALPGLAV-DGELKIM--GRVASKEEIKKI 75 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTCSSSSCEEE-TTEEEEC--SSCCCHHHHHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---CHHHHHHCCCCcCCEEEE-CCEEEEc--CCCCCHHHHHHH
Confidence 3589999999999999999999999988544343333 688999999999999998 8776554 887 89999887
Q ss_pred H
Q 021221 163 Y 163 (316)
Q Consensus 163 i 163 (316)
+
T Consensus 76 l 76 (77)
T 1ilo_A 76 L 76 (77)
T ss_dssp C
T ss_pred h
Confidence 5
No 134
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.56 E-value=1.5e-14 Score=119.69 Aligned_cols=105 Identities=19% Similarity=0.214 Sum_probs=82.6
Q ss_pred CCcceEE--eCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEe-------------
Q 021221 56 QDIVGVI--EGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEE------------- 120 (316)
Q Consensus 56 ~~~v~~l--~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~------------- 120 (316)
+..+..+ +|+.++++.. ..+++++|+||++||++|+.+.|.++++.+. ++..+.++-
T Consensus 30 ~f~l~~~~~~g~~~~~~~~------~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~v~~~~~~~~~~~~~~~ 101 (168)
T 2b1k_A 30 KFRLESLDNPGQFYQADVL------TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ--GIRVVGMNYKDDRQKAISWLKE 101 (168)
T ss_dssp CCEEEESSSTTCEEEGGGG------CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCCEEEEEESCCHHHHHHHHHH
T ss_pred CeEeecccCCCcEeehhHh------cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC--CCEEEEEECCCChHHHHHHHHH
Confidence 4445555 5666443332 4689999999999999999999999999987 555555541
Q ss_pred ---------CCCChhhHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 121 ---------SAIRPSILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 121 ---------~~~~~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
.+.+..++++|+|.++|+++++ +|+.+.++.|..+.+++.++|++.+.
T Consensus 102 ~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 102 LGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp HCCCCSEEEEETTCHHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHHH
T ss_pred cCCCCceeeECcchHHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 3456789999999999987777 78888899999999999999887764
No 135
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.56 E-value=8e-15 Score=118.16 Aligned_cols=102 Identities=19% Similarity=0.302 Sum_probs=79.4
Q ss_pred CCcceEEeCCcccHH--HHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHc-CC--CcEEEEEeCCC-------
Q 021221 56 QDIVGVIEGDEVSLQ--MALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLY-SS--IPHFAIEESAI------- 123 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~--~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~-~~--~~~v~~~~~~~------- 123 (316)
+..+..++|+.+++. +. .+++++|.||++||++|+.+.|.++++.+.| ++ +.++.+ +.+.
T Consensus 13 ~~~l~~~~g~~~~l~~~~~-------~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v-~~d~~~~~~~~ 84 (148)
T 3fkf_A 13 YFSLPNEKGEKLSRSAERF-------RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGI-SLDIDREAWET 84 (148)
T ss_dssp CCCEEBTTSCEECTTSTTT-------TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEE-ECCSCHHHHHH
T ss_pred CeEeeCCCCCEEecccccc-------CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEE-ECCCCHHHHHH
Confidence 444556677777666 44 6799999999999999999999999999999 55 334444 3333
Q ss_pred ------------------ChhhHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 124 ------------------RPSILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 124 ------------------~~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
+..++++|+|.++|+++++ +|+.+.++. +.++|.++|++.+.
T Consensus 85 ~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 85 AIKKDTLSWDQVCDFTGLSSETAKQYAILTLPTNILLSPTGKILARDI---QGEALTGKLKELLK 146 (148)
T ss_dssp HHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHC-
T ss_pred HHHHcCCCceEEEccCCcchHHHHhcCCCCcCEEEEECCCCeEEEecC---CHHHHHHHHHHHHc
Confidence 4588999999999999999 566655554 88999999988764
No 136
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.56 E-value=1.3e-14 Score=118.23 Aligned_cols=104 Identities=18% Similarity=0.290 Sum_probs=81.2
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeCCC----------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAI---------- 123 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~~~---------- 123 (316)
+..+..++|+.+++.+. .+++++|.||++||++|+.+.|.++++.+.|++ +.++.+ +++.
T Consensus 11 ~f~l~~~~G~~~~l~~~-------~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v-~~d~~~~~~~~~~~ 82 (152)
T 2lrn_A 11 AITGIDLKGNSVSLNDF-------KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGV-STDRREEDWKKAIE 82 (152)
T ss_dssp CCEEECSSSCEEESGGG-------TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEE-ECCSCHHHHHHHHH
T ss_pred CceeEcCCCCEEeHHHc-------CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEE-EccCCHHHHHHHHH
Confidence 34455567777776665 679999999999999999999999999999976 344444 4444
Q ss_pred ---------------ChhhHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhhCCC
Q 021221 124 ---------------RPSILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 124 ---------------~~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~~~ 170 (316)
+..+++.|+|.++||++++ +|+.+.++. +.++|.++|++.+...
T Consensus 83 ~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~l~~~~ 143 (152)
T 2lrn_A 83 EDKSYWNQVLLQKDDVKDVLESYCIVGFPHIILVDPEGKIVAKEL---RGDDLYNTVEKFVNGA 143 (152)
T ss_dssp HHTCCSEEEEECHHHHHHHHHHTTCCSSCEEEEECTTSEEEEECC---CTTHHHHHHHHHHTSS
T ss_pred HhCCCCeEEecccchhHHHHHHhCCCcCCeEEEECCCCeEEEeeC---CHHHHHHHHHHHHhhc
Confidence 4678999999999999999 577666653 4578888888887743
No 137
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.55 E-value=5.9e-15 Score=121.10 Aligned_cols=98 Identities=11% Similarity=0.142 Sum_probs=72.2
Q ss_pred cHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHH---HHcC-CCcEEEEEeCCCChhhHhhcCCCccceEEEE-
Q 021221 68 SLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLS---SLYS-SIPHFAIEESAIRPSILSKYGVHGFPTLFLL- 142 (316)
Q Consensus 68 ~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la---~~~~-~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~- 142 (316)
++++++.... ..+++++|+|||+||++|+.|.|.+.+.. +... +++.+.++ ++..+++.+|+|.++||+++|
T Consensus 32 ~~~~al~~A~-~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD--~e~~~~~~~~~v~~~PT~~f~~ 108 (151)
T 3ph9_A 32 TYEEGLFYAQ-KSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLM--HETTDKNLSPDGQYVPRIMFVD 108 (151)
T ss_dssp SHHHHHHHHH-HHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEES--SCCSCGGGCTTCCCSSEEEEEC
T ss_pred CHHHHHHHHH-HcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEec--CCchhhHhhcCCCCCCEEEEEC
Confidence 3777766543 56899999999999999999999998643 2222 44555554 234567889999999999999
Q ss_pred -eCceeEEEeCC-------C---CHHHHHHHHHHhhC
Q 021221 143 -NSSMRVRYHGS-------R---TLDSLVAFYSDVTA 168 (316)
Q Consensus 143 -~g~~~~~~~G~-------~---~~~~l~~fi~~~~~ 168 (316)
+|+.+.+..|. . +.+++.+.+++.+.
T Consensus 109 ~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al~ 145 (151)
T 3ph9_A 109 PSLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKALR 145 (151)
T ss_dssp TTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHHHS
T ss_pred CCCCEEEEEeCCcCCcccccchhhHHHHHHHHHHHHH
Confidence 68888888887 3 44556666665554
No 138
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.55 E-value=1.7e-14 Score=117.45 Aligned_cols=96 Identities=18% Similarity=0.240 Sum_probs=78.7
Q ss_pred CcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEe----------------------CC
Q 021221 65 DEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEE----------------------SA 122 (316)
Q Consensus 65 ~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~----------------------~~ 122 (316)
+.+++.+. .+++++|.||++||++|+.+.|.++++.+. +++.++.++- .+
T Consensus 33 ~~~~l~~~-------~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~-~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d 104 (156)
T 1kng_A 33 PGLDPAAF-------KGKVSLVNVWASWCVPCHDEAPLLTELGKD-KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVD 104 (156)
T ss_dssp CCBCGGGG-------TTSCEEEEEECTTCHHHHHHHHHHHHHTTC-TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEE
T ss_pred ceechHHh-------CCCEEEEEEEcccCHhHHHHHHHHHHHHhc-CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeC
Confidence 67665555 579999999999999999999999999887 4455555431 23
Q ss_pred CChhhHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 123 IRPSILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 123 ~~~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
....+++.|+|.++|+++++ +|+.+.++.|..+.++|.++|++.+.
T Consensus 105 ~~~~~~~~~~v~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 105 ANGRASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQME 152 (156)
T ss_dssp TTSHHHHHTTCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHHH
T ss_pred chhHHHHhcCcCccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHHH
Confidence 45688999999999988888 78888899999999999999988764
No 139
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.55 E-value=1.4e-14 Score=111.83 Aligned_cols=82 Identities=24% Similarity=0.266 Sum_probs=68.6
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChh----hHhhcCCC-ccceEEEE-eCceeEE-EeC
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPS----ILSKYGVH-GFPTLFLL-NSSMRVR-YHG 152 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~----l~~~~~I~-~~Pti~l~-~g~~~~~-~~G 152 (316)
.+++++|+|+|+|||+|+.+.|.|+++++. +++.++. .|.+++++ ++++|||+ ..||+++| +|+.+.+ -++
T Consensus 23 ~~~~vvi~khatwCgpc~~~~~~~e~~~~~-~~v~~~~-vdVde~r~~Sn~IA~~~~V~h~sPq~il~k~G~~v~~~SH~ 100 (112)
T 3iv4_A 23 ENKYVFVLKHSETCPISANAYDQFNKFLYE-RDMDGYY-LIVQQERDLSDYIAKKTNVKHESPQAFYFVNGEMVWNRDHG 100 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHH-HTCCEEE-EEGGGGHHHHHHHHHHHTCCCCSSEEEEEETTEEEEEEEGG
T ss_pred cCCCEEEEEECCcCHhHHHHHHHHHHHhcc-CCceEEE-EEeecCchhhHHHHHHhCCccCCCeEEEEECCEEEEEeecc
Confidence 489999999999999999999999999986 4544444 46667765 89999999 59999999 8888876 558
Q ss_pred CCCHHHHHHHH
Q 021221 153 SRTLDSLVAFY 163 (316)
Q Consensus 153 ~~~~~~l~~fi 163 (316)
..+.+.|.+.+
T Consensus 101 ~I~~~~l~~~~ 111 (112)
T 3iv4_A 101 DINVSSLAQAE 111 (112)
T ss_dssp GCSHHHHHHHT
T ss_pred ccCHHHHHHhh
Confidence 88999888765
No 140
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.55 E-value=3.2e-14 Score=114.01 Aligned_cols=84 Identities=20% Similarity=0.411 Sum_probs=72.3
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcC--CCcEEEEEeC-------------------------CCChhhHhhcC
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEES-------------------------AIRPSILSKYG 132 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~--~~~~v~~~~~-------------------------~~~~~l~~~~~ 132 (316)
.+++++|+||++||++|+.+.|.++++.+.|+ ++.++.+ +. +.+..++++|+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v-~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 111 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTV-NLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYH 111 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEE-ECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEE-EccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcC
Confidence 67899999999999999999999999999998 4444444 33 23568999999
Q ss_pred CCccceEEEE--eCceeEEEeCCCCHHHHHHHHH
Q 021221 133 VHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYS 164 (316)
Q Consensus 133 I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~ 164 (316)
|.++|+++++ +|+.+.++.|..+.++|.++|+
T Consensus 112 v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 112 IITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp CCEESEEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred cCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 9999999999 6888889999999999998873
No 141
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.54 E-value=3e-14 Score=115.88 Aligned_cols=105 Identities=21% Similarity=0.394 Sum_probs=82.3
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeCCCC---------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAIR--------- 124 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~~~~--------- 124 (316)
+..+...+|+.+++.+. .+++++|.||++||++|+.+.|.++++.+.|++ +.++.+ +.+..
T Consensus 10 ~~~l~~~~g~~~~l~~~-------~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v-~~d~~~~~~~~~~~ 81 (154)
T 3kcm_A 10 DFTLNTLNGEVVKLSDL-------KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCV-SIDEGGKVAVEEFF 81 (154)
T ss_dssp CCEEECTTSCEEEGGGG-------TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEE-ECCTTHHHHHHHHH
T ss_pred CeEEEcCCCCEEehhhc-------CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEE-EcCCcchHHHHHHH
Confidence 44455566777776665 679999999999999999999999999999986 333333 33332
Q ss_pred --------------hhhHhhcCCCccceEEEE--eCceeEEEeCCC--CHHHHHHHHHHhhC
Q 021221 125 --------------PSILSKYGVHGFPTLFLL--NSSMRVRYHGSR--TLDSLVAFYSDVTA 168 (316)
Q Consensus 125 --------------~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~--~~~~l~~fi~~~~~ 168 (316)
..+++.|+|.++|+++++ +|+.+.++.|.. +.+++.++|++..+
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 82 RKTGFTLPVLLDADKRVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp HHHCCCCCEEECTTCHHHHHHTCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC--
T ss_pred HHcCCCeeEEecCchHHHHHhCCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHH
Confidence 448899999999988888 788888999986 66799999998766
No 142
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.54 E-value=3.1e-14 Score=116.87 Aligned_cols=106 Identities=23% Similarity=0.471 Sum_probs=83.3
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcC--CCcEEEEEeCCC----------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEESAI---------- 123 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~--~~~~v~~~~~~~---------- 123 (316)
+..+..++|+.+++.+. .+++++|.||++||++|+.+.|.++++.+.|+ ++.++.+ +.+.
T Consensus 23 ~f~l~~~~g~~~~l~~~-------~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v-~~d~~~~~~~~~~~ 94 (158)
T 3hdc_A 23 NFKLPTLSGENKSLAQY-------RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAV-NVEKRFPEKYRRAP 94 (158)
T ss_dssp CCEEECTTSCEEESGGG-------TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEE-ECSSSCCGGGGGCC
T ss_pred CceeEcCCCCEEehHHh-------CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEE-eCCHHHHHHHHHcC
Confidence 44556667777766655 67999999999999999999999999999997 3444444 3333
Q ss_pred ---------ChhhHhhcCCCccceEEEE--eCceeEEEeCCC--CHHHHHHHHHHhhCC
Q 021221 124 ---------RPSILSKYGVHGFPTLFLL--NSSMRVRYHGSR--TLDSLVAFYSDVTAS 169 (316)
Q Consensus 124 ---------~~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~--~~~~l~~fi~~~~~~ 169 (316)
..+++++|+|.++|+++++ +|+.+.++.|.. +.+++.+.+++..++
T Consensus 95 ~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~ 153 (158)
T 3hdc_A 95 VSFNFLSDATGQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGH 153 (158)
T ss_dssp CSCEEEECTTSHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC--
T ss_pred CCceEEECchHHHHHHhCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhccc
Confidence 5789999999999999988 788889999975 567777777776553
No 143
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.54 E-value=2.8e-14 Score=119.66 Aligned_cols=104 Identities=15% Similarity=0.235 Sum_probs=83.9
Q ss_pred CCcceEEeC--CcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEe-------------
Q 021221 56 QDIVGVIEG--DEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEE------------- 120 (316)
Q Consensus 56 ~~~v~~l~~--~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~------------- 120 (316)
+..+..++| +.+++.+. .+++++|+||++||++|+.+.|.++++.++ ++.++.+.-
T Consensus 38 ~f~l~~~~g~~~~~~l~~~-------~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~vs~~d~~~~~~~~~~~ 108 (176)
T 3kh7_A 38 AFDLPSVQDPARRLTEADL-------KGKPALVNVWGTWCPSCRVEHPELTRLAEQ--GVVIYGINYKDDNAAAIKWLNE 108 (176)
T ss_dssp CCEEEBSSCTTSEEEGGGG-------CSSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCEEEEEEESCCHHHHHHHHHH
T ss_pred CcEecccCCCCceecHHHh-------CCCEEEEEEECCcCHHHHHHHHHHHHHHHC--CCEEEEEeCCCCHHHHHHHHHH
Confidence 444555666 55565555 679999999999999999999999999987 555555541
Q ss_pred ---------CCCChhhHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 121 ---------SAIRPSILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 121 ---------~~~~~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
.+.+..+++.|+|.++|+++++ +|+.+.++.|..+.+++.++|++.+.
T Consensus 109 ~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 109 LHNPYLLSISDADGTLGLDLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp TTCCCSEEEEETTCHHHHHHTCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHHH
T ss_pred cCCCCceEEECCcchHHHHcCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 2345678999999999999988 78888899999999999999888765
No 144
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.54 E-value=3.1e-14 Score=119.72 Aligned_cols=105 Identities=12% Similarity=0.180 Sum_probs=83.8
Q ss_pred CCcceEE--eCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--C------cEEEEEeCCC-C
Q 021221 56 QDIVGVI--EGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--I------PHFAIEESAI-R 124 (316)
Q Consensus 56 ~~~v~~l--~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~------~~v~~~~~~~-~ 124 (316)
+..+..+ +|+.+++.+. .+++++|+||++||++|+.+.|.++++.+.|++ + .++.+ +.+. .
T Consensus 39 ~f~l~~~~~~g~~~~l~~~-------~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v-~~d~~~ 110 (183)
T 3lwa_A 39 DIGGDSLMEEGTQINLSDF-------ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGI-NVRDYS 110 (183)
T ss_dssp CCEEEBSSSTTCEEEGGGG-------TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEE-ECSCCC
T ss_pred ceeccccccCCcEecHHHh-------CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEE-ECCCCC
Confidence 4455666 7788777666 679999999999999999999999999999865 3 44444 5544 5
Q ss_pred hhhHhhc-------------------------CCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 125 PSILSKY-------------------------GVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 125 ~~l~~~~-------------------------~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
++..++| +|.++|+++++ +|+.+.++.|..+.++|.++|++.+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 111 RDIAQDFVTDNGLDYPSIYDPPFMTAASLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp HHHHHHHHHHTTCCSCEEECTTCGGGGGTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccEEECCcchHHHHhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 5555554 68999998888 78888899999999999999998764
No 145
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.54 E-value=2.3e-15 Score=125.16 Aligned_cols=98 Identities=11% Similarity=0.183 Sum_probs=74.3
Q ss_pred HHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC-CcEEEEEeCCCChh-hHhhcCC--CccceEEEE--
Q 021221 69 LQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS-IPHFAIEESAIRPS-ILSKYGV--HGFPTLFLL-- 142 (316)
Q Consensus 69 ~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~-~~~v~~~~~~~~~~-l~~~~~I--~~~Pti~l~-- 142 (316)
+++.++... ..+++++|+|||+||++|+.+.|.|+++++.+.. +.++.+ +++.+++ ++.+|++ .++||+++|
T Consensus 35 ~~~~~~~~~-~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v-~~d~~~~~~~~~~~~~~~~~Pt~~~~d~ 112 (164)
T 1sen_A 35 LEDGKKEAA-ASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMV-NLEDEEEPKDEDFSPDGGYIPRILFLDP 112 (164)
T ss_dssp HHHHHHHHH-HHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEE-EEEGGGSCSCGGGCTTCSCSSEEEEECT
T ss_pred HHHHHHHHH-hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEE-EecCCchHHHHHhcccCCcCCeEEEECC
Confidence 555554443 4679999999999999999999999998766542 333333 3333444 7788888 669999999
Q ss_pred eCceeEEEeCC----------CCHHHHHHHHHHhhC
Q 021221 143 NSSMRVRYHGS----------RTLDSLVAFYSDVTA 168 (316)
Q Consensus 143 ~g~~~~~~~G~----------~~~~~l~~fi~~~~~ 168 (316)
+|+.+.++.|. .+.++|.++|++.+.
T Consensus 113 ~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 113 SGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp TSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHHH
Confidence 68888888884 789999999998765
No 146
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.53 E-value=1.9e-14 Score=115.93 Aligned_cols=99 Identities=15% Similarity=0.251 Sum_probs=75.4
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHH---HHHHcCC--CcEEEEEeCCCCh-----
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSV---LSSLYSS--IPHFAIEESAIRP----- 125 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~---la~~~~~--~~~v~~~~~~~~~----- 125 (316)
+..+...+|+.+++.+. .+++++|+|||+||++|+.+.|.+++ +.+.|++ +..+.+. .+...
T Consensus 13 ~f~l~~~~g~~~~l~~~-------~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~-~d~~~~~~~~ 84 (142)
T 3eur_A 13 NFTYTLDSGVKGTLYQF-------PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIY-PDEELDEWKK 84 (142)
T ss_dssp CCEEEETTSCEEETTTC-------CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEE-CSSCHHHHHH
T ss_pred CcEEEcCCCCEeeHHHc-------CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEE-cCCCHHHHHH
Confidence 45566677888777665 57999999999999999999999999 9998843 4455543 33332
Q ss_pred -------------------hhHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHH
Q 021221 126 -------------------SILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSD 165 (316)
Q Consensus 126 -------------------~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~ 165 (316)
.+.+.|+|.++||++++ +|+.+.+.. +.++|.++|++
T Consensus 85 ~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~e 142 (142)
T 3eur_A 85 HRNDFAKEWTNGYDKELVIKNKNLYDLRAIPTLYLLDKNKTVLLKDA---TLQKVEQYLAE 142 (142)
T ss_dssp HGGGSCTTSEEEECTTCHHHHTTCSCCTTCSEEEEECTTCBEEEEEE---CHHHHHHHHHC
T ss_pred HHHhcccccccccCccchhhhhhhcCCCcCCeEEEECCCCcEEecCC---CHHHHHHHHhC
Confidence 15789999999999999 566666554 47888888763
No 147
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.52 E-value=1.8e-14 Score=115.68 Aligned_cols=102 Identities=18% Similarity=0.379 Sum_probs=74.2
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHH---HHHHcCC--CcEEEEEeCCCChh----
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSV---LSSLYSS--IPHFAIEESAIRPS---- 126 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~---la~~~~~--~~~v~~~~~~~~~~---- 126 (316)
+..+..++|+.+++.+. .+++++|+||++||++|+.+.|.+.+ +.+.|++ +..+.+ +.+...+
T Consensus 9 ~f~l~~~~g~~~~l~~~-------~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v-~~d~~~~~~~~ 80 (142)
T 3ewl_A 9 DFTYVTVHGDNSRMSRL-------KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAI-YPDENREEWAT 80 (142)
T ss_dssp CCEEECTTCCEEEGGGC-------CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEE-ECSSCHHHHHH
T ss_pred CCEEECCCCCEEEhhhc-------CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEE-EecCCHHHHHH
Confidence 44455567777776665 68999999999999999999999998 8887753 444444 3333332
Q ss_pred ------------------h--HhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 127 ------------------I--LSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 127 ------------------l--~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
+ ++.|+|.++||++++ +|+.+. +..+.++|.++|++..+
T Consensus 81 ~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~---~~~~~~~l~~~l~~~~~ 141 (142)
T 3ewl_A 81 KAVYMPQGWIVGWNKAGDIRTRQLYDIRATPTIYLLDGRKRVIL---KDTSMEQLIDYLATQAG 141 (142)
T ss_dssp HHTTSCTTCEEEECTTCHHHHTTCSCCCSSSEEEEECTTCBEEE---CSCCHHHHHHHHHC---
T ss_pred HHHHcCCCcceeeCCccchhhHHHcCCCCCCeEEEECCCCCEEe---cCCCHHHHHHHHHHHcc
Confidence 2 348999999999999 454433 56789999999987654
No 148
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.52 E-value=3.4e-14 Score=118.54 Aligned_cols=83 Identities=16% Similarity=0.211 Sum_probs=64.7
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcC---CCccceEEEE-e-CceeEEEeCCC
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYG---VHGFPTLFLL-N-SSMRVRYHGSR 154 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~---I~~~Pti~l~-~-g~~~~~~~G~~ 154 (316)
.+++++|+|||+|||+|+.+.|.++++++.++++ .+..++.+++++++.+|+ |.++||+++| + |+.+.++ |.+
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~~v-~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~G~~~~~~-g~~ 130 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQPNI-ELAIISKGRAEDDLRQRLALERIAIPLVLVLDEEFNLLGRF-VER 130 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCTTE-EEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTTCCEEEEE-ESS
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCc-EEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCCCCEEEEE-cCC
Confidence 5789999999999999999999999999998764 444456667788999997 9999999999 4 4555555 554
Q ss_pred CHHHHHHHHHH
Q 021221 155 TLDSLVAFYSD 165 (316)
Q Consensus 155 ~~~~l~~fi~~ 165 (316)
. ..+.+.+++
T Consensus 131 p-~~~~~~i~~ 140 (167)
T 1z6n_A 131 P-QAVLDGGPQ 140 (167)
T ss_dssp C-HHHHHHCHH
T ss_pred C-HHHHHhHHH
Confidence 4 344444444
No 149
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.51 E-value=3.9e-14 Score=115.81 Aligned_cols=101 Identities=20% Similarity=0.239 Sum_probs=78.8
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeCCCChh-------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAIRPS------- 126 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~~~~~~------- 126 (316)
+..+..++|+.+++.+. .+++++|.||++||++|+.+.|.++++.++|++ +.++.+ +.+...+
T Consensus 17 ~f~l~~~~G~~~~l~~~-------~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i-~~d~~~~~~~~~~~ 88 (152)
T 2lrt_A 17 DIQLKDLKGNTRSLTDL-------KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQI-SLDGDEHFWKTSAD 88 (152)
T ss_dssp CCCEEBTTSCEECTTTG-------GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEE-ECSCCHHHHHHHHT
T ss_pred CeEEEcCCCCEEeHHHh-------CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEE-EccCCHHHHHHHHh
Confidence 44455667777777665 578999999999999999999999999999875 344444 3433332
Q ss_pred ----------------hHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHH
Q 021221 127 ----------------ILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYS 164 (316)
Q Consensus 127 ----------------l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~ 164 (316)
+.+.|+|.++|+++++ +|+.+.++.|..+.++...-..
T Consensus 89 ~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~e~~~~~~~ 144 (152)
T 2lrt_A 89 NLPWVCVRDANGAYSSYISLYNVTNLPSVFLVNRNNELSARGENIKDLDEAIKKLL 144 (152)
T ss_dssp TCSSEEEECSSGGGCHHHHHHTCCSCSEEEEEETTTEEEEETTTCSCHHHHHHHHH
T ss_pred CCCceEEECCCCcchHHHHHcCcccCceEEEECCCCeEEEecCCHHHHHHHHHHHH
Confidence 8899999999999999 6888888899888776655443
No 150
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.50 E-value=6.3e-14 Score=115.62 Aligned_cols=103 Identities=22% Similarity=0.384 Sum_probs=80.8
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCC-------------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA------------- 122 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~------------- 122 (316)
+..+..++|+.+++.+. .+++++|+||++||++|+.+.|.++++.+.|+++.++.+ +.+
T Consensus 19 ~~~l~~~~g~~~~l~~~-------~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~~v~vv~i-~~d~~~~~~~~~~~~~ 90 (165)
T 3ha9_A 19 SFSLTTIDGEVISLNNV-------GGDVVILWFMAAWCPSCVYMADLLDRLTEKYREISVIAI-DFWTAEALKALGLNKP 90 (165)
T ss_dssp CCCEEBTTSCEECGGGC-------CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCTTEEEEEE-ECCSHHHHHHHTCCST
T ss_pred CCEeecCCCCEeeHHHh-------CCCEEEEEEECCCCcchhhhHHHHHHHHHHcCCcEEEEE-Eecccccccccccccc
Confidence 33445567777666655 679999999999999999999999999999996555555 333
Q ss_pred -----CC----------------------hhhHhhcCCCccceEEEE--eCceeEEEeCCC-CHHHHHHHHHHhhC
Q 021221 123 -----IR----------------------PSILSKYGVHGFPTLFLL--NSSMRVRYHGSR-TLDSLVAFYSDVTA 168 (316)
Q Consensus 123 -----~~----------------------~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~-~~~~l~~fi~~~~~ 168 (316)
.. .++++.|+|.++||++++ +|+.+. .|.. +.++|.++|++.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~--~g~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 91 GYPPPDTPEMFRKFIANYGDPSWIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY--AGTTPSLGELESVIKSVQG 164 (165)
T ss_dssp TSCCCCCHHHHHHHHHHHSCTTSEEEECCSHHHHHTTCCSSSEEEEEETTCCEEE--EEESCCHHHHHHHHHHC--
T ss_pred cCCCCCCHHHHHHHHHHcCCCCeeEEeChHHHHHHhCCCCceEEEEEcCCCcEEE--eCCCCCHHHHHHHHHHHhc
Confidence 22 378999999999999999 455544 8888 99999999998764
No 151
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.48 E-value=1.6e-13 Score=116.47 Aligned_cols=107 Identities=18% Similarity=0.309 Sum_probs=84.9
Q ss_pred CCcce-EEeCCcccHHHHHhHHhccCCC-eEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeC----------
Q 021221 56 QDIVG-VIEGDEVSLQMALNMVHKNSHE-YVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEES---------- 121 (316)
Q Consensus 56 ~~~v~-~l~~~~~~~~~~~~~i~~~~~~-~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~---------- 121 (316)
+..+. .++|+.+++.++ .++ +++|+||++||++|+.+.|.++++.++|++ +.++.+.-.
T Consensus 26 ~f~l~~~~~G~~~~l~~~-------~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~ 98 (196)
T 2ywi_A 26 PFALTNVIDGNVVRLEDV-------KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSP 98 (196)
T ss_dssp CCEEEETTTCCEEEHHHH-------CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSH
T ss_pred ceeeeecCCCCEEeHHHh-------CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCH
Confidence 34445 567888888887 566 599999999999999999999999999875 455555321
Q ss_pred ------------------CCChhhHhhcCCCccceEEEE--eCceeEE---------EeCCCCHHHHHHHHHHhhCC
Q 021221 122 ------------------AIRPSILSKYGVHGFPTLFLL--NSSMRVR---------YHGSRTLDSLVAFYSDVTAS 169 (316)
Q Consensus 122 ------------------~~~~~l~~~~~I~~~Pti~l~--~g~~~~~---------~~G~~~~~~l~~fi~~~~~~ 169 (316)
+.+.++++.|+|.++|+++++ +|+.+.+ +.|..+.++|.+.|++.+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~ 175 (196)
T 2ywi_A 99 ENMKKVAEELGYPFPYLYDETQEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEG 175 (196)
T ss_dssp HHHHHHHHHHTCCSCEEECSSCHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCceEEECCchHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcC
Confidence 345678999999999999999 5777766 45777899999999998763
No 152
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.47 E-value=1.9e-13 Score=115.34 Aligned_cols=108 Identities=16% Similarity=0.241 Sum_probs=82.0
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC-CcEEEEEeC-------------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS-IPHFAIEES------------- 121 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~-~~~v~~~~~------------- 121 (316)
+..+...+|+.+++.+. .+++++|+||++||++|+.+.|.++++.++|.+ +.++.+...
T Consensus 15 ~f~l~~~~G~~~~l~~~-------~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~ 87 (188)
T 2cvb_A 15 DAELPDPRGGRYRLSQF-------HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKM 87 (188)
T ss_dssp CCEEECTTSCEEEGGGC-------CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHH
T ss_pred CceeecCCCCEEeHHHh-------CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHH
Confidence 34455567777776665 679999999999999999999999999999987 444444311
Q ss_pred ---------------CCChhhHhhcCCCccceEEEE--eCceeEE--------EeCCCCHHHHHHHHHHhhCCC
Q 021221 122 ---------------AIRPSILSKYGVHGFPTLFLL--NSSMRVR--------YHGSRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 122 ---------------~~~~~l~~~~~I~~~Pti~l~--~g~~~~~--------~~G~~~~~~l~~fi~~~~~~~ 170 (316)
+.+.++++.|+|.++|+++++ +|+.+.+ +.|..+.++|.+.|++.+...
T Consensus 88 ~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 161 (188)
T 2cvb_A 88 AAFAEEHGIFFPYLLDETQEVAKAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGE 161 (188)
T ss_dssp HHHHHHHTCCSCEEECSSSHHHHHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCceEEECCcchHHHHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcCC
Confidence 345678999999999999999 5655544 123347899999999988743
No 153
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.47 E-value=4.3e-13 Score=112.84 Aligned_cols=105 Identities=19% Similarity=0.273 Sum_probs=82.1
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcC--CCcEEEEEeCCCC-----hhhH
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEESAIR-----PSIL 128 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~--~~~~v~~~~~~~~-----~~l~ 128 (316)
+..+...+|+.+++.+. .+++++|+||++||++|+.+.|.++++.+.|+ ++..+.+. .+.. ..+.
T Consensus 42 ~f~l~~~~G~~~~l~~~-------~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~-~d~~~~~~~~~~~ 113 (186)
T 1jfu_A 42 DLAFEDADGKPKKLSDF-------RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAIN-IDTRDPEKPKTFL 113 (186)
T ss_dssp CCEEECTTSCEEEGGGG-------TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEE-CCCSCTTHHHHHH
T ss_pred CcEeEcCCCCEeeHHHc-------CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEE-CCCCCHHHHHHHH
Confidence 34455567888777666 68999999999999999999999999999987 34444443 3322 4566
Q ss_pred hhcCCC-----------------------ccceEEEE--eCceeEEEeCCCC--HHHHHHHHHHhhC
Q 021221 129 SKYGVH-----------------------GFPTLFLL--NSSMRVRYHGSRT--LDSLVAFYSDVTA 168 (316)
Q Consensus 129 ~~~~I~-----------------------~~Pti~l~--~g~~~~~~~G~~~--~~~l~~fi~~~~~ 168 (316)
+++++. ++|+++++ +|+.+.++.|..+ .+++.++|++.++
T Consensus 114 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 180 (186)
T 1jfu_A 114 KEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATG 180 (186)
T ss_dssp HHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC
T ss_pred HHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhc
Confidence 666664 89999999 7888889999875 7899999999876
No 154
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.47 E-value=2.1e-13 Score=110.71 Aligned_cols=101 Identities=13% Similarity=0.248 Sum_probs=78.7
Q ss_pred CCcceEEeCCcccHH--HHHhHHhccCCCeEEEEEEcCCChH--HHhhhHHHHHHHHHc-CC--CcEEEEEeCCCC----
Q 021221 56 QDIVGVIEGDEVSLQ--MALNMVHKNSHEYVAVLFYASWCPF--SRNFRPSFSVLSSLY-SS--IPHFAIEESAIR---- 124 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~--~~~~~i~~~~~~~vlV~Fya~WC~~--Ck~~~p~~~~la~~~-~~--~~~v~~~~~~~~---- 124 (316)
+..+..++|+.+++. +. .+++++|+||++||++ |+.+.|.++++.++| ++ +.++.+ +.+..
T Consensus 13 ~f~l~~~~g~~~~l~~~~~-------~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v-~~d~~~~~~ 84 (150)
T 3fw2_A 13 FFSLPNAKGEKITRSSDAF-------KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGI-SLDVDKQQW 84 (150)
T ss_dssp CCCEEBTTCCEECTTSTTT-------TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEE-ECCSCHHHH
T ss_pred ccEeECCCCCEEecchhhh-------CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEE-EcCCCHHHH
Confidence 455566678887776 55 6799999999999999 999999999999999 44 444444 33332
Q ss_pred ---------------------hhhHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhh
Q 021221 125 ---------------------PSILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 125 ---------------------~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~ 167 (316)
..+++.|+|.++|+++++ +|+.+.++. +.+++.+.|++.+
T Consensus 85 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll 147 (150)
T 3fw2_A 85 KDAIKRDTLDWEQVCDFGGLNSEVAKQYSIYKIPANILLSSDGKILAKNL---RGEELKKKIENIV 147 (150)
T ss_dssp HHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHH
T ss_pred HHHHHHhCCCceEEEcCcccchHHHHHcCCCccCeEEEECCCCEEEEccC---CHHHHHHHHHHHH
Confidence 378999999999999999 566666553 7888888888765
No 155
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.47 E-value=1.5e-13 Score=127.73 Aligned_cols=103 Identities=12% Similarity=0.181 Sum_probs=84.8
Q ss_pred ceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEe----------------
Q 021221 59 VGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEE---------------- 120 (316)
Q Consensus 59 v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~---------------- 120 (316)
+...+|+.+++.+. .++++||+||++||++|+.+.|.+++++++|++ +.++.+.-
T Consensus 67 L~d~dG~~vsLsdl-------~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~ 139 (352)
T 2hyx_A 67 LNTPGNKPIDLKSL-------RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGA 139 (352)
T ss_dssp ESSGGGCCCCGGGG-------TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHH
T ss_pred cCCCCCCEEcHHHh-------CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHH
Confidence 34456777777666 679999999999999999999999999999875 45555531
Q ss_pred ----------CCCChhhHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 121 ----------SAIRPSILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 121 ----------~~~~~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
.+.+..+++.|+|.++||++++ +|+.+.++.|..+.++|.++|++.+.
T Consensus 140 ~~~~l~fpv~~D~~~~l~~~ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL~ 199 (352)
T 2hyx_A 140 ANLGISYPIALDNNYATWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLN 199 (352)
T ss_dssp HHHTCCSCEEECTTSHHHHHTTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHHH
T ss_pred HHcCCCccEEeCCcHHHHHHcCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHHh
Confidence 1234679999999999999999 78888999999999999999998764
No 156
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.45 E-value=2e-13 Score=105.17 Aligned_cols=77 Identities=16% Similarity=0.150 Sum_probs=66.3
Q ss_pred CeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eCceeEEEeCCCCHHHHH
Q 021221 82 EYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDSLV 160 (316)
Q Consensus 82 ~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~~~~~G~~~~~~l~ 160 (316)
...++.||++||++|+.+.|.++++++.++ +.+..+|.++++++.++||++ +||+++| +|+.+ +.|..+.++|.
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v--~~g~~~~~~L~ 103 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL--CHYFLDSDVIG 103 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE--ECSSCCCHHHH
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE--EecCCCHHHHH
Confidence 367999999999999999999999999875 455566777889999999997 9999998 77765 46888999999
Q ss_pred HHH
Q 021221 161 AFY 163 (316)
Q Consensus 161 ~fi 163 (316)
++|
T Consensus 104 ~~L 106 (107)
T 2fgx_A 104 AYL 106 (107)
T ss_dssp HHH
T ss_pred HHh
Confidence 887
No 157
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.43 E-value=1.2e-13 Score=115.74 Aligned_cols=72 Identities=17% Similarity=0.216 Sum_probs=56.0
Q ss_pred ccCCCeEEEEEEcCCChHHHhhhHH-H--HHHHHHcCCCcEEEEEeCCCChhhHhhc--------CCCccceEEEE--eC
Q 021221 78 KNSHEYVAVLFYASWCPFSRNFRPS-F--SVLSSLYSSIPHFAIEESAIRPSILSKY--------GVHGFPTLFLL--NS 144 (316)
Q Consensus 78 ~~~~~~vlV~Fya~WC~~Ck~~~p~-~--~~la~~~~~~~~v~~~~~~~~~~l~~~~--------~I~~~Pti~l~--~g 144 (316)
...+++|+|+|||+||++|+.|.|. | .++++.+.+...+..+|.++.+++.+.| ||.++||++++ +|
T Consensus 36 ~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~dG 115 (173)
T 3ira_A 36 RKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMTPGK 115 (173)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSSEEEEECTTS
T ss_pred HHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCCCCCcceeeECCCC
Confidence 3578999999999999999999993 3 4666655442334444777889999998 99999999999 56
Q ss_pred ceeEE
Q 021221 145 SMRVR 149 (316)
Q Consensus 145 ~~~~~ 149 (316)
+++..
T Consensus 116 ~~v~~ 120 (173)
T 3ira_A 116 KPFFA 120 (173)
T ss_dssp CEEEE
T ss_pred Cceee
Confidence 66544
No 158
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.42 E-value=2.2e-13 Score=101.11 Aligned_cols=75 Identities=13% Similarity=0.036 Sum_probs=62.4
Q ss_pred EEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHHHHHH
Q 021221 85 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYS 164 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~fi~ 164 (316)
++.||++||++|+.+.|.+++++..+ +..+|.++++++.++||++ +||+++.+|+.+. |..+.+.|.++++
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~~~l~~~~g~~-vPtl~~~~G~~v~---g~~~~~~L~~~l~ 73 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDDAALESAYGLR-VPVLRDPMGRELD---WPFDAPRLRAWLD 73 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTCHHHHHHHTTT-CSEEECTTCCEEE---SCCCHHHHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCCHHHHHHhCCC-cCeEEEECCEEEe---CCCCHHHHHHHHH
Confidence 78999999999999999999987653 3456777889999999998 9999875566553 8889999999998
Q ss_pred HhhC
Q 021221 165 DVTA 168 (316)
Q Consensus 165 ~~~~ 168 (316)
+.+.
T Consensus 74 ~~~~ 77 (87)
T 1ttz_A 74 AAPH 77 (87)
T ss_dssp TCC-
T ss_pred HHHH
Confidence 7654
No 159
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.42 E-value=3.8e-13 Score=108.30 Aligned_cols=98 Identities=14% Similarity=0.142 Sum_probs=69.2
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeCCC----------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAI---------- 123 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~~~---------- 123 (316)
+..+ ..+|+.+++.+. .+++++|+|||+||++|+.+.|.++++.++|++ +.++.+. .+.
T Consensus 15 ~f~l-~~~g~~~~l~~~-------~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs-~d~~~~~~~~~~~ 85 (143)
T 4fo5_A 15 RIEF-LGNDAKASFHNQ-------LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSIS-MDEKESIFTETVK 85 (143)
T ss_dssp CCCC------CCCSCCS-------SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEE-CCSCHHHHHHHHH
T ss_pred ceEE-cCCCCEEEHHHh-------CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEE-ccCCHHHHHHHHH
Confidence 3444 567777666655 679999999999999999999999999999974 4444442 221
Q ss_pred ----------------ChhhHhhcCCCccceEEEE--eCceeEEEeCCCCHHHHHHHHHH
Q 021221 124 ----------------RPSILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSD 165 (316)
Q Consensus 124 ----------------~~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~ 165 (316)
...+++.|+|.++|+++++ +|+.+.+.. +.+++.+++++
T Consensus 86 ~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ 142 (143)
T 4fo5_A 86 IDKLDLSTQFHEGLGKESELYKKYDLRKGFKNFLINDEGVIIAANV---TPEKLTEILKA 142 (143)
T ss_dssp HHTCCGGGEEECTTGGGSHHHHHTTGGGCCCEEEECTTSBEEEESC---CHHHHHHHHTC
T ss_pred HhCCCCceeeecccccchHHHHHcCCCCCCcEEEECCCCEEEEccC---CHHHHHHHHHh
Confidence 1357889999999999999 566655543 46777777653
No 160
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.40 E-value=1.2e-12 Score=113.61 Aligned_cols=106 Identities=23% Similarity=0.343 Sum_probs=82.3
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCC-eEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeC-----------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHE-YVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEES----------- 121 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~-~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~----------- 121 (316)
+..+..++|+.+++.++ .++ +++|.||++||++|+.+.|.++++.++|++ +.++.+.-.
T Consensus 40 ~f~l~~~~G~~v~l~~~-------~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~ 112 (218)
T 3u5r_E 40 DFVLPDAGGNLFTLAEF-------KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLE 112 (218)
T ss_dssp CCCEECTTCCEECGGGG-------TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHH
T ss_pred CcEeECCCCCEEeHHHh-------CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHH
Confidence 45566677888887776 566 599999999999999999999999999976 444444321
Q ss_pred -----------------CCChhhHhhcCCCccceEEEE--eCceeEEEeC-----------CCCHHHHHHHHHHhhCCC
Q 021221 122 -----------------AIRPSILSKYGVHGFPTLFLL--NSSMRVRYHG-----------SRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 122 -----------------~~~~~l~~~~~I~~~Pti~l~--~g~~~~~~~G-----------~~~~~~l~~fi~~~~~~~ 170 (316)
+....+++.|+|.++|+++++ +|+.+ |.| ..+.++|.+.|++.+...
T Consensus 113 ~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i~--~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~ 189 (218)
T 3u5r_E 113 RVGAEVKAYGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLV--YHGQFDDARPGNGKDVTGADLRAAVDAVLKGK 189 (218)
T ss_dssp HHHHHHHHHTCCSCEEECTTCHHHHHHTCCEESEEEEECTTCBEE--EEECSSSCCTTSCCCCCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCccEEECCccHHHHHcCCCCCCeEEEECCCCcEE--EeccccccccccccccCHHHHHHHHHHHHcCC
Confidence 345689999999999999999 45544 443 345789999999988743
No 161
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.40 E-value=9.9e-14 Score=125.23 Aligned_cols=74 Identities=19% Similarity=0.407 Sum_probs=61.1
Q ss_pred EEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEE--eC-CCChhhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHH
Q 021221 84 VAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIE--ES-AIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLV 160 (316)
Q Consensus 84 vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~--~~-~~~~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~ 160 (316)
.+|+|||||||||+++.|.|++++++++ .+.++ |. +++++++++|+|+++||+++ ||+ +|.|.++.++|.
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l~---~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i-~G~---~~~G~~~~~~L~ 272 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQVP---YVECSPNGPGTPQAQECTEAGITSYPTWII-NGR---TYTGVRSLEALA 272 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGSC---EEESCSSCSSSCCCHHHHTTTCCSTTEEEE-TTE---EEESCCCHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHcC---EEEEeecCchhhHHHHHHHcCCcccCeEEE-CCE---EecCCCCHHHHH
Confidence 3799999999999999999999998763 34433 22 34789999999999999655 775 499999999999
Q ss_pred HHHH
Q 021221 161 AFYS 164 (316)
Q Consensus 161 ~fi~ 164 (316)
+|+.
T Consensus 273 ~~l~ 276 (291)
T 3kp9_A 273 VASG 276 (291)
T ss_dssp HHTC
T ss_pred HHHC
Confidence 9875
No 162
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.38 E-value=7.7e-13 Score=106.53 Aligned_cols=79 Identities=23% Similarity=0.301 Sum_probs=62.5
Q ss_pred CcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC---CcEEEEEeCCC----------
Q 021221 57 DIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS---IPHFAIEESAI---------- 123 (316)
Q Consensus 57 ~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~---~~~v~~~~~~~---------- 123 (316)
..+..++|+.+++.+. .+++++|+||++||++|+.+.|.++++++.|++ +..+.+ +.+.
T Consensus 11 f~l~~~~g~~~~l~~~-------~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v-~~d~~~~~~~~~~~ 82 (144)
T 1i5g_A 11 TNVLKGAAADIALPSL-------AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLI-SWDESAEDFKDYYA 82 (144)
T ss_dssp SEEEETTEEEEEGGGG-------TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEE-ECCSSHHHHHHHHT
T ss_pred eEEEcCCCCEecHHHc-------CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEE-eCCCCHHHHHHHHH
Confidence 3455667777776665 678999999999999999999999999999973 333343 3332
Q ss_pred --------------ChhhHhhcCCCccceEEEEe
Q 021221 124 --------------RPSILSKYGVHGFPTLFLLN 143 (316)
Q Consensus 124 --------------~~~l~~~~~I~~~Pti~l~~ 143 (316)
...++++|+|.++||+++++
T Consensus 83 ~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid 116 (144)
T 1i5g_A 83 KMPWLALPFEDRKGMEFLTTGFDVKSIPTLVGVE 116 (144)
T ss_dssp TCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEE
T ss_pred hCCccccccCchHHHHHHHHHcCCCCCCEEEEEE
Confidence 25789999999999999996
No 163
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.38 E-value=6.7e-13 Score=110.09 Aligned_cols=76 Identities=25% Similarity=0.367 Sum_probs=59.8
Q ss_pred ceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC---CcEEEEEeCCCC-----------
Q 021221 59 VGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS---IPHFAIEESAIR----------- 124 (316)
Q Consensus 59 v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~---~~~v~~~~~~~~----------- 124 (316)
+...++ .+++.+. .+++++|+|||+||++|+.+.|.++++++.|++ +.++.+ +.+..
T Consensus 34 l~~~~g-~v~l~~~-------~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v-~~d~~~~~~~~~~~~~ 104 (165)
T 3s9f_A 34 LRKQAD-TADMDSL-------SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILA-SWDEEEDDFNAYYAKM 104 (165)
T ss_dssp EEETTE-EECSGGG-------TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEE-ECCCSHHHHHHHHTTC
T ss_pred eecCCC-cccHHHc-------CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEE-ecCCCHHHHHHHHHhC
Confidence 444555 6555555 679999999999999999999999999999975 333333 33333
Q ss_pred -------------hhhHhhcCCCccceEEEEe
Q 021221 125 -------------PSILSKYGVHGFPTLFLLN 143 (316)
Q Consensus 125 -------------~~l~~~~~I~~~Pti~l~~ 143 (316)
..++++|+|.++||+++++
T Consensus 105 ~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~lid 136 (165)
T 3s9f_A 105 PWLSIPFANRNIVEALTKKYSVESIPTLIGLN 136 (165)
T ss_dssp SSEECCTTCHHHHHHHHHHTTCCSSSEEEEEE
T ss_pred CCcccccCchhHHHHHHHHcCCCCCCEEEEEe
Confidence 6789999999999999994
No 164
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.38 E-value=1.5e-12 Score=106.82 Aligned_cols=105 Identities=10% Similarity=0.107 Sum_probs=82.9
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChH-HHhhhHHHHHHHHHcC------CCcEEEEEeCCCC----
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPF-SRNFRPSFSVLSSLYS------SIPHFAIEESAIR---- 124 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~-Ck~~~p~~~~la~~~~------~~~~v~~~~~~~~---- 124 (316)
+..+...+|+.+++.++ .+++++|.||++||++ |+...|.++++.++|+ ++..+.+. .+..
T Consensus 5 ~f~l~~~~G~~~~l~~~-------~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs-~d~~~d~~ 76 (164)
T 2ggt_A 5 PFSLTTHTGERKTDKDY-------LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFIS-IDPERDTK 76 (164)
T ss_dssp CCEEEETTSCEEEGGGG-------TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEE-SCTTTCCH
T ss_pred CeEEEeCCCCEEeHHHc-------CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEE-eCCCCCCH
Confidence 34455567888777766 6799999999999998 9999999999999874 44444443 2221
Q ss_pred ------------------------hhhHhhcCCCccc---------------eEEEE--eCceeEEEeCCCCHHHHHHHH
Q 021221 125 ------------------------PSILSKYGVHGFP---------------TLFLL--NSSMRVRYHGSRTLDSLVAFY 163 (316)
Q Consensus 125 ------------------------~~l~~~~~I~~~P---------------ti~l~--~g~~~~~~~G~~~~~~l~~fi 163 (316)
..+++.|||.+.| +++++ +|+.+.++.|..+.++|.+.|
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l 156 (164)
T 2ggt_A 77 EAIANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASI 156 (164)
T ss_dssp HHHHHHHHTTCSSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHH
Confidence 1488899999999 77777 788899999999999999999
Q ss_pred HHhhC
Q 021221 164 SDVTA 168 (316)
Q Consensus 164 ~~~~~ 168 (316)
++.+.
T Consensus 157 ~~ll~ 161 (164)
T 2ggt_A 157 ATHMR 161 (164)
T ss_dssp HHHHG
T ss_pred HHHHH
Confidence 98764
No 165
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.37 E-value=2.2e-12 Score=106.73 Aligned_cols=105 Identities=13% Similarity=0.084 Sum_probs=83.3
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChH-HHhhhHHHHHHHHHcC------CCcEEEEEeCCC---C-
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPF-SRNFRPSFSVLSSLYS------SIPHFAIEESAI---R- 124 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~-Ck~~~p~~~~la~~~~------~~~~v~~~~~~~---~- 124 (316)
+..+...+|+.+++.++ .+++++|.||++||++ |+.+.|.++++.+.|+ ++.++.+. .+. .
T Consensus 8 ~f~l~~~~G~~~~l~~~-------~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is-~d~~~d~~ 79 (171)
T 2rli_A 8 DFHLLDHRGRARCKADF-------RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFIT-VDPERDDV 79 (171)
T ss_dssp CCEEEETTSCEEETTTT-------TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEE-SCSTTCCH
T ss_pred CeEEEeCCCCEEeHHHh-------CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEE-ECCCCCCH
Confidence 34455567777777666 6799999999999998 9999999999999883 44444443 221 1
Q ss_pred ------------------------hhhHhhcCCCccc---------------eEEEE--eCceeEEEeCCCCHHHHHHHH
Q 021221 125 ------------------------PSILSKYGVHGFP---------------TLFLL--NSSMRVRYHGSRTLDSLVAFY 163 (316)
Q Consensus 125 ------------------------~~l~~~~~I~~~P---------------ti~l~--~g~~~~~~~G~~~~~~l~~fi 163 (316)
..+++.|||...| +++++ +|+.+.++.|..+.++|.+.|
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l 159 (171)
T 2rli_A 80 EAMARYVQDFHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSV 159 (171)
T ss_dssp HHHHHHHHTTCTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHH
Confidence 2578899999998 88888 788889999999999999999
Q ss_pred HHhhC
Q 021221 164 SDVTA 168 (316)
Q Consensus 164 ~~~~~ 168 (316)
++.+.
T Consensus 160 ~~ll~ 164 (171)
T 2rli_A 160 RRHMA 164 (171)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98765
No 166
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.37 E-value=6.5e-13 Score=110.47 Aligned_cols=104 Identities=16% Similarity=0.173 Sum_probs=78.6
Q ss_pred CcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEe----------CCCC
Q 021221 57 DIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEE----------SAIR 124 (316)
Q Consensus 57 ~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~----------~~~~ 124 (316)
..+..++|+.+++.+. .+++++|.|||+||++|+ ..|.++++.++|.+ +.++.+.- .+..
T Consensus 15 f~l~d~~G~~~~l~~~-------~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~ 86 (171)
T 3cmi_A 15 LAPVDKKGQPFPFDQL-------KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEI 86 (171)
T ss_dssp CCCBBTTSCBCCGGGG-------TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC----------
T ss_pred eEEEcCCCCEecHHHc-------CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHH
Confidence 3455667888777776 679999999999999999 99999999999875 44444421 1111
Q ss_pred hhhH------------------------------hhcCCCccc------eEEEE--eCceeEEEeCCCCHHHHHHHHHHh
Q 021221 125 PSIL------------------------------SKYGVHGFP------TLFLL--NSSMRVRYHGSRTLDSLVAFYSDV 166 (316)
Q Consensus 125 ~~l~------------------------------~~~~I~~~P------ti~l~--~g~~~~~~~G~~~~~~l~~fi~~~ 166 (316)
.+.. ..|+|.++| +++++ +|+.+.++.|..+.++|.+.|++.
T Consensus 87 ~~~~~~~~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 166 (171)
T 3cmi_A 87 AQFCQLNYGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEEL 166 (171)
T ss_dssp --------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHH
T ss_pred HHHHHhccCCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHH
Confidence 1111 257899999 88888 788889999999999999999988
Q ss_pred hC
Q 021221 167 TA 168 (316)
Q Consensus 167 ~~ 168 (316)
+.
T Consensus 167 l~ 168 (171)
T 3cmi_A 167 LK 168 (171)
T ss_dssp HT
T ss_pred HH
Confidence 75
No 167
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.36 E-value=2.8e-12 Score=105.56 Aligned_cols=103 Identities=17% Similarity=0.186 Sum_probs=78.4
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCe-EEEEEE-cCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeCC---------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEY-VAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESA--------- 122 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~-vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~~--------- 122 (316)
+..+...+|+.+++.+. .+++ ++|.|| ++||++|+...|.++++.++|++ +.++.+ ..+
T Consensus 10 ~f~l~~~~G~~~~l~~~-------~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v-s~d~~~~~~~~~ 81 (161)
T 3drn_A 10 LFEGIADNGEKISLSDY-------IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGV-SSDDINSHKRFK 81 (161)
T ss_dssp CCEEEETTSCEEEGGGT-------TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEE-ESCCHHHHHHHH
T ss_pred CeEeecCCCCEEEHHHh-------cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEE-eCCCHHHHHHHH
Confidence 45566677888777776 5666 999999 99999999999999999999865 444444 333
Q ss_pred ------------CChhhHhhcCCCc----cceEEEE--eCceeEEEeCCC-C---HHHHHHHHHHh
Q 021221 123 ------------IRPSILSKYGVHG----FPTLFLL--NSSMRVRYHGSR-T---LDSLVAFYSDV 166 (316)
Q Consensus 123 ------------~~~~l~~~~~I~~----~Pti~l~--~g~~~~~~~G~~-~---~~~l~~fi~~~ 166 (316)
...++++.|||.+ +|+++++ +|+.+..+.|.. . .+++.+.+++.
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l 147 (161)
T 3drn_A 82 EKYKLPFILVSDPDKKIRELYGAKGFILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQI 147 (161)
T ss_dssp HHTTCCSEEEECTTSHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHHH
T ss_pred HHhCCCceEEECCcHHHHHHcCCCCcCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHHh
Confidence 4568999999999 9999999 688888898833 3 34455555443
No 168
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.36 E-value=1e-12 Score=105.61 Aligned_cols=77 Identities=29% Similarity=0.405 Sum_probs=60.2
Q ss_pred cceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcC---CCcEEEEEeCCC-----------
Q 021221 58 IVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS---SIPHFAIEESAI----------- 123 (316)
Q Consensus 58 ~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~---~~~~v~~~~~~~----------- 123 (316)
.+...+| .+++.+. .+++++|+||++||++|+.+.|.++++++.|+ ++..+.+ +.+.
T Consensus 13 ~l~~~~g-~~~l~~~-------~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i-~~d~~~~~~~~~~~~ 83 (144)
T 1o73_A 13 NLLSKSG-EVSLGSL-------VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLI-SWDENESDFHDYYGK 83 (144)
T ss_dssp CBBCTTS-CBCSGGG-------TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEE-ECCSSHHHHHHHHTT
T ss_pred EeecCCC-cCcHHHh-------CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEE-eCCCCHHHHHHHHHh
Confidence 3445566 6666655 67899999999999999999999999999987 2333333 3332
Q ss_pred -------------ChhhHhhcCCCccceEEEEe
Q 021221 124 -------------RPSILSKYGVHGFPTLFLLN 143 (316)
Q Consensus 124 -------------~~~l~~~~~I~~~Pti~l~~ 143 (316)
...++++|+|.++||+++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid 116 (144)
T 1o73_A 84 MPWLALPFDQRSTVSELGKTFGVESIPTLITIN 116 (144)
T ss_dssp CSSEECCTTCHHHHHHHHHHHTCCSSSEEEEEE
T ss_pred CCceEeeccchhHHHHHHHHcCCCCCCEEEEEE
Confidence 24689999999999999997
No 169
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.35 E-value=1.4e-12 Score=105.24 Aligned_cols=77 Identities=22% Similarity=0.377 Sum_probs=61.0
Q ss_pred cceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC---CcEEEEEeCCC-----------
Q 021221 58 IVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS---IPHFAIEESAI----------- 123 (316)
Q Consensus 58 ~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~---~~~v~~~~~~~----------- 123 (316)
.+..++| .+++.+. .+++++|+||++||++|+.+.|.++++++.|++ +..+.+ +.+.
T Consensus 13 ~l~~~~g-~~~l~~~-------~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v-~~d~~~~~~~~~~~~ 83 (146)
T 1o8x_A 13 KLRRGDG-EVEVKSL-------AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFC-TWDEEEDGFAGYFAK 83 (146)
T ss_dssp EEEETTE-EEEGGGG-------TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEE-ECCCSHHHHHHHHTT
T ss_pred EEEcCCC-CCcHHHh-------CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEE-eCCCCHHHHHHHHHH
Confidence 4555667 7666655 678999999999999999999999999999872 333443 3332
Q ss_pred -------------ChhhHhhcCCCccceEEEEe
Q 021221 124 -------------RPSILSKYGVHGFPTLFLLN 143 (316)
Q Consensus 124 -------------~~~l~~~~~I~~~Pti~l~~ 143 (316)
...++++|+|.++||+++++
T Consensus 84 ~~~~~~~~~~~d~~~~~~~~~~v~~~Pt~~lid 116 (146)
T 1o8x_A 84 MPWLAVPFAQSEAVQKLSKHFNVESIPTLIGVD 116 (146)
T ss_dssp CSSEECCGGGHHHHHHHHHHTTCCSSSEEEEEE
T ss_pred CCceeeccchhhHHHHHHHHhCCCCCCEEEEEE
Confidence 35789999999999999996
No 170
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.01 E-value=1.1e-13 Score=113.43 Aligned_cols=103 Identities=17% Similarity=0.252 Sum_probs=73.2
Q ss_pred CcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHH-HHHHcC---CCcEEEEEeCCCCh-------
Q 021221 57 DIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSV-LSSLYS---SIPHFAIEESAIRP------- 125 (316)
Q Consensus 57 ~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~-la~~~~---~~~~v~~~~~~~~~------- 125 (316)
..+...+|+.+++.+. .+++++|.||++||++|+.+.|.+++ +.+.+. ++..+.++ .+..+
T Consensus 16 f~l~~~~g~~~~l~~~-------~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~-~d~~~~~~~~~~ 87 (159)
T 2ls5_A 16 FTITLTDGKQVTLSSL-------RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGID-RDEPLEKVLAFA 87 (159)
Confidence 3445567777777666 67899999999999999999999998 888776 33333332 22222
Q ss_pred ---------------hhHhhcC--CCccceEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 126 ---------------SILSKYG--VHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 126 ---------------~l~~~~~--I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
.+.+.|+ +.++|+++++ +|+.+.++.| .+.+++.+++++..+
T Consensus 88 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l~~ 148 (159)
T 2ls5_A 88 KSTGVTYPLGLDPGADIFAKYALRDAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQINE 148 (159)
Confidence 2334455 5779999999 6777777777 466677777776554
No 171
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.32 E-value=4e-12 Score=107.68 Aligned_cols=105 Identities=14% Similarity=0.122 Sum_probs=80.7
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeCCC-------C--
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAI-------R-- 124 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~~~-------~-- 124 (316)
+..+..++|+.+++.+. .+++++|.||++||++|+...|.++++.++|++ +.++.+. ++. .
T Consensus 30 ~f~l~~~~G~~~~l~~~-------~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs-~d~~~~~~~~~~~ 101 (190)
T 2vup_A 30 DFEVLDADHKPYNLVQH-------KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFP-CNQFGGQEPGNEE 101 (190)
T ss_dssp GSCCBBTTSSBCCGGGG-------TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEE-CCCSTTCCCSCHH
T ss_pred CeEEEcCCCCEEEHHHc-------CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEE-cCccCCCCCCCHH
Confidence 34455667888777766 679999999999999999999999999999875 4455543 221 1
Q ss_pred --hhhH------------------------------hhcCCCccc------eEEEE--eCceeEEEeCCCCHHHHHHHHH
Q 021221 125 --PSIL------------------------------SKYGVHGFP------TLFLL--NSSMRVRYHGSRTLDSLVAFYS 164 (316)
Q Consensus 125 --~~l~------------------------------~~~~I~~~P------ti~l~--~g~~~~~~~G~~~~~~l~~fi~ 164 (316)
.+.+ ..|+|.++| +++++ +|+.+.++.|..+.++|.+.|+
T Consensus 102 ~~~~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 181 (190)
T 2vup_A 102 EIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLI 181 (190)
T ss_dssp HHHHHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHH
Confidence 1122 125888999 88888 7888899999999999999999
Q ss_pred HhhC
Q 021221 165 DVTA 168 (316)
Q Consensus 165 ~~~~ 168 (316)
+.+.
T Consensus 182 ~ll~ 185 (190)
T 2vup_A 182 PLLE 185 (190)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8875
No 172
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.32 E-value=1e-12 Score=108.46 Aligned_cols=105 Identities=15% Similarity=0.223 Sum_probs=79.2
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeCCC-------C--
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAI-------R-- 124 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~~~-------~-- 124 (316)
+..+..++|+.+++.+. .+++++|.||++||++|+.+.|.++++.++|++ +.++.+ .++. .
T Consensus 14 ~f~l~~~~g~~~~l~~~-------~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v-s~d~~~~~~~~~~~ 85 (170)
T 2p5q_A 14 DFTVKDAKENDVDLSIF-------KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAF-PCNQFGEEEPGTND 85 (170)
T ss_dssp GCEEEBTTSCEEEGGGG-------TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE-ECCTTTTCCCSCHH
T ss_pred ceEEEcCCCCEecHHHh-------CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEE-ECCCCCCCCCCCHH
Confidence 34455567778777666 689999999999999999999999999999875 444444 3221 1
Q ss_pred --hhhHh-hc-----------------------------CC--Cccc---eEEEE--eCceeEEEeCCCCHHHHHHHHHH
Q 021221 125 --PSILS-KY-----------------------------GV--HGFP---TLFLL--NSSMRVRYHGSRTLDSLVAFYSD 165 (316)
Q Consensus 125 --~~l~~-~~-----------------------------~I--~~~P---ti~l~--~g~~~~~~~G~~~~~~l~~fi~~ 165 (316)
.+.++ ++ +| .++| +++++ +|+.+.++.|..+.++|.+.|++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 165 (170)
T 2p5q_A 86 QITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQ 165 (170)
T ss_dssp HHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHH
T ss_pred HHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHH
Confidence 12222 22 55 6789 88888 78888999999999999999998
Q ss_pred hhC
Q 021221 166 VTA 168 (316)
Q Consensus 166 ~~~ 168 (316)
.+.
T Consensus 166 ll~ 168 (170)
T 2p5q_A 166 LLE 168 (170)
T ss_dssp HTT
T ss_pred Hhh
Confidence 875
No 173
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.31 E-value=8.3e-13 Score=111.08 Aligned_cols=104 Identities=15% Similarity=0.121 Sum_probs=77.9
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeCCC-------C--
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAI-------R-- 124 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~~~-------~-- 124 (316)
+..+..++|+.+++.+. .+++++|.||++||++|+...|.++++.++|++ +..+.+. ++. .
T Consensus 31 ~f~l~~~~G~~~~l~~~-------~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs-~d~~~~~e~~~~~ 102 (181)
T 2p31_A 31 DFKAVNIRGKLVSLEKY-------RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFP-CNQFGQQEPDSNK 102 (181)
T ss_dssp GCEEEBTTSCEEEGGGG-------TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEE-CCCSTTCCCSCHH
T ss_pred ceEeecCCCCEecHHHc-------CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEE-CcCCCCCCCCCHH
Confidence 44455667888777766 679999999999999999999999999999875 4444443 221 1
Q ss_pred --hhhHh------------------------hcCCCccc-------eEEEE--eCceeEEEeCCCCHHHHHHHHHHhh
Q 021221 125 --PSILS------------------------KYGVHGFP-------TLFLL--NSSMRVRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 125 --~~l~~------------------------~~~I~~~P-------ti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~ 167 (316)
.+.++ +|++.++| +++++ +|+.+.++.|..+.++|.+.|++.+
T Consensus 103 ~~~~~~~~~~~~~~p~~~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 103 EIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp HHHHHHHHHHCCCSCBBCCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred HHHHHHHhhcCCCceeEeecccCCccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 11222 23366789 77777 7888899999999999999998754
No 174
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=99.31 E-value=9.6e-13 Score=102.24 Aligned_cols=80 Identities=11% Similarity=0.242 Sum_probs=60.4
Q ss_pred CCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCC-----hhhHhhcCCCccceEEEEeCceeEEEeCCC-
Q 021221 81 HEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIR-----PSILSKYGVHGFPTLFLLNSSMRVRYHGSR- 154 (316)
Q Consensus 81 ~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~-----~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~- 154 (316)
++++++ ||++||++|+++.|.++++...| ..+.+ +.+.. ..++++|||.++||+ +++|+.+..+.|..
T Consensus 19 ~~~vv~-f~a~~C~~C~~~~~~l~~~~~~~---~~v~v-~~~~~~~~~~~~l~~~~~v~~~Pt~-~~~g~~v~~~~~~~~ 92 (116)
T 2e7p_A 19 SAPVVV-FSKTYCGYCNRVKQLLTQVGASY---KVVEL-DELSDGSQLQSALAHWTGRGTVPNV-FIGGKQIGGCDTVVE 92 (116)
T ss_dssp SSSEEE-EECTTCHHHHHHHHHHHHHTCCC---EEEEG-GGSTTHHHHHHHHHHHHSCCSSCEE-EETTEEEECHHHHHH
T ss_pred CCCEEE-EECCCChhHHHHHHHHHHcCCCe---EEEEc-cCCCChHHHHHHHHHHhCCCCcCEE-EECCEEECChHHHHH
Confidence 355666 99999999999999999986543 23333 33333 469999999999999 45888887777665
Q ss_pred --CHHHHHHHHHHh
Q 021221 155 --TLDSLVAFYSDV 166 (316)
Q Consensus 155 --~~~~l~~fi~~~ 166 (316)
+.+.|.++|++.
T Consensus 93 ~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 93 KHQRNELLPLLQDA 106 (116)
T ss_dssp HHHTTCHHHHHHHT
T ss_pred HHhCChHHHHHHHc
Confidence 667888888874
No 175
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.31 E-value=4.3e-12 Score=104.62 Aligned_cols=105 Identities=15% Similarity=0.135 Sum_probs=77.7
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeCCC-------C--
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAI-------R-- 124 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~~~-------~-- 124 (316)
+..+..++|+.+++.+. .+++++|.||++||++|+...|.++++.++|++ +..+.+. ++. .
T Consensus 13 ~f~l~~~~G~~~~l~~~-------~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~-~d~~~~~~~~~~~ 84 (169)
T 2v1m_A 13 EFTVKDINGVDVSLEKY-------RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFP-CNQFGGQEPWAEA 84 (169)
T ss_dssp GCEEEBTTSCEEEGGGG-------TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEE-CCCSTTCCCSCHH
T ss_pred cceeecCCCCCccHHHc-------CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEE-CCccCCCCCCCHH
Confidence 34455567888777766 679999999999999999999999999999875 4444443 211 0
Q ss_pred --hhh-Hhhc-----------------------------C-----CCccceEEEE--eCceeEEEeCCCCHHHHHHHHHH
Q 021221 125 --PSI-LSKY-----------------------------G-----VHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSD 165 (316)
Q Consensus 125 --~~l-~~~~-----------------------------~-----I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~~ 165 (316)
.+. .+++ | |..+|+++++ +|+.+.++.|..+.++|.+.|++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 164 (169)
T 2v1m_A 85 EIKKFVTEKYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIME 164 (169)
T ss_dssp HHHHHHHHHHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHH
T ss_pred HHHHHHHHhcCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHH
Confidence 112 1211 4 4446899888 78888999999899999999988
Q ss_pred hhC
Q 021221 166 VTA 168 (316)
Q Consensus 166 ~~~ 168 (316)
.+.
T Consensus 165 ll~ 167 (169)
T 2v1m_A 165 LLE 167 (169)
T ss_dssp HHH
T ss_pred Hhc
Confidence 764
No 176
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.31 E-value=1.6e-12 Score=109.97 Aligned_cols=106 Identities=13% Similarity=0.108 Sum_probs=80.0
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeC-------CCChh
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEES-------AIRPS 126 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~-------~~~~~ 126 (316)
+..+..++|+.+++.+. .+++++|+|||+||++|+.+.|.++++.++|++ +..+.+.-. +....
T Consensus 28 ~f~l~d~~G~~~~l~~~-------~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~ 100 (187)
T 3dwv_A 28 DFEVLDADHKPYNLVQH-------KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEE 100 (187)
T ss_dssp GSCCBBTTSCBCCGGGG-------TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTH
T ss_pred CeEEEcCCCCEeeHHHh-------CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHH
Confidence 44456678888887776 679999999999999999999999999999875 455555311 11111
Q ss_pred hH------------------------------------hhcCCCccc---eEEEE--eCceeEEEeCCCCHHHHHHHHHH
Q 021221 127 IL------------------------------------SKYGVHGFP---TLFLL--NSSMRVRYHGSRTLDSLVAFYSD 165 (316)
Q Consensus 127 l~------------------------------------~~~~I~~~P---ti~l~--~g~~~~~~~G~~~~~~l~~fi~~ 165 (316)
+. ..+++.++| +++++ +|+.+.++.|..+.++|.+.|++
T Consensus 101 ~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~ 180 (187)
T 3dwv_A 101 IKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIP 180 (187)
T ss_dssp HHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHH
Confidence 11 223555677 98888 78888999999999999999998
Q ss_pred hhC
Q 021221 166 VTA 168 (316)
Q Consensus 166 ~~~ 168 (316)
.+.
T Consensus 181 lL~ 183 (187)
T 3dwv_A 181 LLG 183 (187)
T ss_dssp HC-
T ss_pred HHh
Confidence 876
No 177
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.95 E-value=3e-13 Score=108.42 Aligned_cols=88 Identities=22% Similarity=0.438 Sum_probs=64.2
Q ss_pred cceEEeCCcccHHH-HHhHHhccCCC-eEEEEEEcCCChHHHhhhHHHHHHHHHc----CCCcEEEE--EeCC-------
Q 021221 58 IVGVIEGDEVSLQM-ALNMVHKNSHE-YVAVLFYASWCPFSRNFRPSFSVLSSLY----SSIPHFAI--EESA------- 122 (316)
Q Consensus 58 ~v~~l~~~~~~~~~-~~~~i~~~~~~-~vlV~Fya~WC~~Ck~~~p~~~~la~~~----~~~~~v~~--~~~~------- 122 (316)
.+..++|+.+++.+ . .++ +++|+||++||++|+.+.|.++++++.| +++..+.+ ++..
T Consensus 8 ~l~~~~g~~~~l~~~~-------~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~ 80 (143)
T 2lus_A 8 KLVKKNRCEVNANEAL-------KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYM 80 (143)
Confidence 34556777877777 4 566 9999999999999999999999999988 24333333 2111
Q ss_pred ---------------CChhhHhhcCCCccceEEEE--eCceeEEEeCC
Q 021221 123 ---------------IRPSILSKYGVHGFPTLFLL--NSSMRVRYHGS 153 (316)
Q Consensus 123 ---------------~~~~l~~~~~I~~~Pti~l~--~g~~~~~~~G~ 153 (316)
...+++++|+|.++||++++ +|+.+.+ .|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~-~~~ 127 (143)
T 2lus_A 81 MESHGDWLAIPYRSGPASNVTAKYGITGIPALVIVKKDGTLISM-NGR 127 (143)
Confidence 11478999999999999999 4555444 443
No 178
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.28 E-value=4.5e-12 Score=104.81 Aligned_cols=102 Identities=15% Similarity=0.179 Sum_probs=78.1
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChH-HHhhhHHHHHHHHHcC-----CCcEEEEEeCCCC-----
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPF-SRNFRPSFSVLSSLYS-----SIPHFAIEESAIR----- 124 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~-Ck~~~p~~~~la~~~~-----~~~~v~~~~~~~~----- 124 (316)
+..+...+| .+++.+. .+++++|.||++||++ |+.+.|.++++.++|+ ++.++.+. .+..
T Consensus 18 ~f~l~~~~g-~~~l~~~-------~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is-~d~~~d~~~ 88 (172)
T 2k6v_A 18 DFALEGPQG-PVRLSQF-------QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVS-VDPERDPPE 88 (172)
T ss_dssp CCEEECSSS-EEEGGGS-------TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEE-SCTTTCCHH
T ss_pred CeEEEcCCC-CCcHHHh-------CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEE-ECCCCCCHH
Confidence 344455567 7776665 6799999999999997 9999999999999987 44455543 3321
Q ss_pred -----------------------hhhHhhcC---------------CCccceEEEE-eCceeEEEeCCC--CHHHHHHHH
Q 021221 125 -----------------------PSILSKYG---------------VHGFPTLFLL-NSSMRVRYHGSR--TLDSLVAFY 163 (316)
Q Consensus 125 -----------------------~~l~~~~~---------------I~~~Pti~l~-~g~~~~~~~G~~--~~~~l~~fi 163 (316)
..+++.|| |.++|+++++ +|+.+.++.|.. +.++|.+.|
T Consensus 89 ~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~~~~~~~l~~~l 168 (172)
T 2k6v_A 89 VADRYAKAFHPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDKAEATDRVVADL 168 (172)
T ss_dssp HHHHHHHHHCTTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHHHTCHHHHHHHH
T ss_pred HHHHHHHHhCCCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCCCCCHHHHHHHH
Confidence 24666665 4688999999 788888888888 899999998
Q ss_pred HHh
Q 021221 164 SDV 166 (316)
Q Consensus 164 ~~~ 166 (316)
++.
T Consensus 169 ~~l 171 (172)
T 2k6v_A 169 QAL 171 (172)
T ss_dssp HHC
T ss_pred HHh
Confidence 865
No 179
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.27 E-value=1.5e-11 Score=100.76 Aligned_cols=103 Identities=12% Similarity=0.120 Sum_probs=77.2
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCC-eEEEEEE-cCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeC----------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHE-YVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEES---------- 121 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~-~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~---------- 121 (316)
+..+...+|+.+++.++ .++ +++|.|| ++||++|+.+.|.++++.++|.+ +..+.+...
T Consensus 17 ~f~l~~~~G~~~~l~~~-------~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~ 89 (160)
T 1xvw_A 17 DFTLRDQNQQLVTLRGY-------RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWAT 89 (160)
T ss_dssp CCEEECTTSCEEEGGGG-------TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHH
T ss_pred CeEeEcCCCCEEeHHHh-------cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHH
Confidence 34455567788777766 555 9999998 99999999999999999999864 444444311
Q ss_pred ----------C--CChhhHhhcCCC----ccc--eEEEE--eCceeEEEeCCC----CHHHHHHHHHH
Q 021221 122 ----------A--IRPSILSKYGVH----GFP--TLFLL--NSSMRVRYHGSR----TLDSLVAFYSD 165 (316)
Q Consensus 122 ----------~--~~~~l~~~~~I~----~~P--ti~l~--~g~~~~~~~G~~----~~~~l~~fi~~ 165 (316)
+ .+..+++.|||. ++| +++++ +|+.+.++.|.. +.+++.+.|++
T Consensus 90 ~~~~~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 90 QSGFTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp HHTCCSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred hcCCCceEEecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 1 156799999999 999 78777 788888888865 34666666654
No 180
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.27 E-value=7.4e-12 Score=102.73 Aligned_cols=99 Identities=9% Similarity=0.134 Sum_probs=72.4
Q ss_pred cHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHH---HHHHHHc-CCCcEEEEEeC-CCChhhHhhcCCCccceEEEE
Q 021221 68 SLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSF---SVLSSLY-SSIPHFAIEES-AIRPSILSKYGVHGFPTLFLL 142 (316)
Q Consensus 68 ~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~---~~la~~~-~~~~~v~~~~~-~~~~~l~~~~~I~~~Pti~l~ 142 (316)
++++++... +..+|+++|+||++||..|+.|.... .++.+.+ .+.+.+.++.. ++...+.++|+|.++||++++
T Consensus 30 ~~~~Al~~A-k~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fl 108 (153)
T 2dlx_A 30 SFETAKECG-QMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSIL 108 (153)
T ss_dssp CHHHHHHHH-HHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEE
T ss_pred CHHHHHHHH-HHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEE
Confidence 378875544 45689999999999999999996443 3333333 24455555432 234578999999999999999
Q ss_pred --e-CceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 143 --N-SSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 143 --~-g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
+ |+.+..+.| .+.+++.++|++.+.
T Consensus 109 d~~~G~~l~~~~g-~~~~~fl~~L~~~l~ 136 (153)
T 2dlx_A 109 DPRTGQKLVEWHQ-LDVSSFLDQVTGFLG 136 (153)
T ss_dssp CTTTCCCCEEESS-CCHHHHHHHHHHHHH
T ss_pred eCCCCcEeeecCC-CCHHHHHHHHHHHHH
Confidence 4 567777656 899999999988764
No 181
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.27 E-value=9.1e-12 Score=105.06 Aligned_cols=106 Identities=9% Similarity=0.104 Sum_probs=82.9
Q ss_pred CCcceEEeCC----cccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcC--CCcEEEEEeC-------
Q 021221 56 QDIVGVIEGD----EVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEES------- 121 (316)
Q Consensus 56 ~~~v~~l~~~----~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~--~~~~v~~~~~------- 121 (316)
+..+...+|+ .+++.++ .+++++|+|| ++||++|+.+.|.++++.++|+ ++..+.+...
T Consensus 9 ~f~l~~~~g~~~~~~~~l~~~-------~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~ 81 (187)
T 1we0_A 9 PFRAQAFQSGKDFFEVTEADL-------KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKA 81 (187)
T ss_dssp CCEEEEECSSSCCEEEETTTT-------SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHH
T ss_pred CeEEeccCCCccceEecHHHH-------CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHH
Confidence 4445566677 7776665 5799999999 9999999999999999999886 4444444321
Q ss_pred -----------------CCChhhHhhcCCC------ccceEEEE--eCceeEEEeCCC----CHHHHHHHHHHhhC
Q 021221 122 -----------------AIRPSILSKYGVH------GFPTLFLL--NSSMRVRYHGSR----TLDSLVAFYSDVTA 168 (316)
Q Consensus 122 -----------------~~~~~l~~~~~I~------~~Pti~l~--~g~~~~~~~G~~----~~~~l~~fi~~~~~ 168 (316)
+.+..+++.|+|. ++|+++++ +|+.+.++.|.. +.++|.+.|++...
T Consensus 82 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 82 WHENSPAVGSIEYIMIGDPSQTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp HHHSCHHHHTCCSEEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHHH
T ss_pred HHHHhccccCCCceEEECCchHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 1145788999999 99999999 688888888764 78899999987764
No 182
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.26 E-value=5.5e-12 Score=105.85 Aligned_cols=105 Identities=17% Similarity=0.172 Sum_probs=77.4
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeCC-----------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESA----------- 122 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~~----------- 122 (316)
+..+..++|+.+++.+. .+++++|.|||+||++|+...|.++++.++|++ +..+++. ++
T Consensus 20 ~f~l~d~~G~~v~l~~~-------~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is-~d~~~~~~~d~~~ 91 (180)
T 3kij_A 20 AFEVKDAKGRTVSLEKY-------KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFP-CNQFGESEPRPSK 91 (180)
T ss_dssp GCEEEBTTSCEEEGGGG-------TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEE-CCCSTTCCCSCHH
T ss_pred ceEEecCCCCEecHHHc-------CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEE-CCccccCCCCCHH
Confidence 44556677888887776 679999999999999999999999999999976 3444443 21
Q ss_pred CChhhHhh-cCCC--------------------------ccce----EEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 123 IRPSILSK-YGVH--------------------------GFPT----LFLL--NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 123 ~~~~l~~~-~~I~--------------------------~~Pt----i~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
...+.+++ +++. ++|+ ++++ +|+.+.+|.|..+.++|.+.|++.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL~ 170 (180)
T 3kij_A 92 EVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVR 170 (180)
T ss_dssp HHHHHHHHHHCCCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCceeeeeeccCccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 11234444 4432 2677 7777 78889999999888877777776654
No 183
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.25 E-value=1.4e-11 Score=104.84 Aligned_cols=97 Identities=11% Similarity=0.222 Sum_probs=77.3
Q ss_pred CcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeC--------------------
Q 021221 65 DEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEES-------------------- 121 (316)
Q Consensus 65 ~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~-------------------- 121 (316)
+.+++.++ .+++++|.|| ++||++|+...|.+.++.++|++ +.++.+...
T Consensus 36 ~~v~l~~~-------~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~ 108 (195)
T 2bmx_A 36 TTITSDEH-------PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPF 108 (195)
T ss_dssp EEEETTSS-------TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCS
T ss_pred cEeeHHHh-------CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCce
Confidence 56565555 5789999999 99999999999999999998864 444444321
Q ss_pred ----CCChhhHhhcCCC-----ccceEEEE--eCceeEEEeCCC----CHHHHHHHHHHhhC
Q 021221 122 ----AIRPSILSKYGVH-----GFPTLFLL--NSSMRVRYHGSR----TLDSLVAFYSDVTA 168 (316)
Q Consensus 122 ----~~~~~l~~~~~I~-----~~Pti~l~--~g~~~~~~~G~~----~~~~l~~fi~~~~~ 168 (316)
+.+..+++.|+|. ++|+++++ +|+.+.++.|.. +.++|.+.|++...
T Consensus 109 ~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 109 PMLSDIKRELSQAAGVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp CEEECTTSHHHHHHTCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred eEEeCCchHHHHHhCCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 1245788999999 99999999 688888888764 78999999998775
No 184
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.24 E-value=5.8e-11 Score=98.01 Aligned_cols=105 Identities=13% Similarity=0.041 Sum_probs=80.8
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCC-ChHHHhhhHHHHHHHHHcCCCcEEEEEeCC------------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASW-CPFSRNFRPSFSVLSSLYSSIPHFAIEESA------------ 122 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~W-C~~Ck~~~p~~~~la~~~~~~~~v~~~~~~------------ 122 (316)
+..+...+|+.+++.+. .+++++|.||++| |++|+...|.++++.++|+++..+.+...+
T Consensus 26 ~f~l~~~~G~~~~l~~~-------~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~vv~is~d~~~~~~~~~~~~~ 98 (167)
T 2jsy_A 26 DFTVLTNSLEEKSLADM-------KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKLGDVNVYTISADLPFAQARWCGANG 98 (167)
T ss_dssp CCEEEBTTCCEEEHHHH-------TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHHSSCEEEEEECSSGGGTSCCGGGSS
T ss_pred ceEEECCCCCEeeHHHh-------CCCeEEEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHhcC
Confidence 44556667888888887 6789999999999 999999999999999998665555553211
Q ss_pred ----------CChhhHhhcCCCc------cceEEEE--eCceeEEEeCC-----CCHHHHHHHHHHhh
Q 021221 123 ----------IRPSILSKYGVHG------FPTLFLL--NSSMRVRYHGS-----RTLDSLVAFYSDVT 167 (316)
Q Consensus 123 ----------~~~~l~~~~~I~~------~Pti~l~--~g~~~~~~~G~-----~~~~~l~~fi~~~~ 167 (316)
...++.+.|+|.. +|+++++ +|+.+.++.|. .+.+++.+.|++.+
T Consensus 99 ~~~~~~~~d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 99 IDKVETLSDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp CTTEEEEEGGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred CCCceEeeCCchhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 2346788899987 4999999 68888888753 24578888887654
No 185
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.24 E-value=8.4e-12 Score=107.62 Aligned_cols=104 Identities=13% Similarity=0.015 Sum_probs=76.9
Q ss_pred CcceEEe-CCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeCC-----C--C-h
Q 021221 57 DIVGVIE-GDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESA-----I--R-P 125 (316)
Q Consensus 57 ~~v~~l~-~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~~-----~--~-~ 125 (316)
..+..++ |+.+++.+. .++++||.|||+|||+|+...|.++++.++|++ +..+++. ++ + . .
T Consensus 29 f~l~~~~~G~~v~l~~~-------~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~-~d~~~~~e~d~~~ 100 (208)
T 2f8a_A 29 FSARPLAGGEPVSLGSL-------RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFP-CNQFGHQENAKNE 100 (208)
T ss_dssp CEECBTTCSSCEEGGGG-------TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEE-CCCSTTTTCSCHH
T ss_pred eEeeeCCCCCCccHHHc-------CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEE-CCcccccCCCCHH
Confidence 3344556 778777776 679999999999999999999999999999865 4455553 21 1 1 1
Q ss_pred h---hHh------hcC-----------------------------------------------------CCccceEEEE-
Q 021221 126 S---ILS------KYG-----------------------------------------------------VHGFPTLFLL- 142 (316)
Q Consensus 126 ~---l~~------~~~-----------------------------------------------------I~~~Pti~l~- 142 (316)
+ .++ +++ |...|+++++
T Consensus 101 ~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID 180 (208)
T 2f8a_A 101 EILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVG 180 (208)
T ss_dssp HHHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEEC
T ss_pred HHHHHHHhcccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEc
Confidence 1 121 332 3445889988
Q ss_pred -eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 143 -NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 143 -~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
+|+.+.+|.|..+.++|.+.|++.+.
T Consensus 181 ~~G~i~~~~~g~~~~~~l~~~I~~ll~ 207 (208)
T 2f8a_A 181 PDGVPLRRYSRRFQTIDIEPDIEALLS 207 (208)
T ss_dssp TTSCEEEEECTTSCGGGGHHHHHHHHC
T ss_pred CCCcEEEEeCCCCCHHHHHHHHHHHhh
Confidence 78899999999999999999988763
No 186
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.24 E-value=1.3e-11 Score=103.81 Aligned_cols=103 Identities=17% Similarity=0.103 Sum_probs=75.1
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeCCC-------C--
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAI-------R-- 124 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~~~-------~-- 124 (316)
+..+..++|+.+++.+. .+++++|.||++||++|+...|.++++.++|++ +.++.+. ++. .
T Consensus 29 ~f~l~~~~G~~~~l~~~-------~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs-~d~~~~~e~~~~~ 100 (183)
T 2obi_A 29 EFSAKDIDGHMVNLDKY-------RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFP-CNQFGKQEPGSNE 100 (183)
T ss_dssp GCEEEBTTSCEEEGGGG-------TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEE-CCCSTTCCCSCHH
T ss_pred ceEEEcCCCCEeeHHHc-------CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEE-CCCCCCCCCCCHH
Confidence 44455667888777766 679999999999999999999999999999875 4445543 210 0
Q ss_pred --hhhHhh---------------------c----------C-----CCccceEEEE--eCceeEEEeCCCCHHHHHHHHH
Q 021221 125 --PSILSK---------------------Y----------G-----VHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYS 164 (316)
Q Consensus 125 --~~l~~~---------------------~----------~-----I~~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~ 164 (316)
.+.+++ | + |+.+|+++++ +|+.+.++.|..+.++|.+.|+
T Consensus 101 ~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 180 (183)
T 2obi_A 101 EIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLP 180 (183)
T ss_dssp HHHHHHHTTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSG
T ss_pred HHHHHHHHcCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHH
Confidence 011111 2 4 3346999999 7888899999988888888776
Q ss_pred Hh
Q 021221 165 DV 166 (316)
Q Consensus 165 ~~ 166 (316)
+.
T Consensus 181 ~l 182 (183)
T 2obi_A 181 HY 182 (183)
T ss_dssp GG
T ss_pred Hh
Confidence 54
No 187
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=99.21 E-value=2.5e-11 Score=92.34 Aligned_cols=81 Identities=12% Similarity=0.149 Sum_probs=64.1
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCC--CChhhHhhcCCCccceEEEEeCceeEEEeCCCCHH
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA--IRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLD 157 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~--~~~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~ 157 (316)
...+.++.|+++||++|+++.|.++++++. +.+...|.+ +++++.++|| .++|+++ .+|+.+ ..|..+.+
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~~~----i~~~~vdi~~~~~~el~~~~g-~~vP~l~-~~g~~~--~~~g~~~~ 85 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYKDR----FILQEVDITLPENSTWYERYK-FDIPVFH-LNGQFL--MMHRVNTS 85 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTSSS----SEEEEEETTSSTTHHHHHHSS-SSCSEEE-ESSSEE--EESSCCHH
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhhhC----CeEEEEECCCcchHHHHHHHC-CCCCEEE-ECCEEE--EecCCCHH
Confidence 456789999999999999999999887543 445555655 6789999999 9999863 477764 45668999
Q ss_pred HHHHHHHHhhC
Q 021221 158 SLVAFYSDVTA 168 (316)
Q Consensus 158 ~l~~fi~~~~~ 168 (316)
.|.++|++...
T Consensus 86 ~l~~~l~~~~~ 96 (100)
T 1wjk_A 86 KLEKQLRKLSG 96 (100)
T ss_dssp HHHHHHHSSSC
T ss_pred HHHHHHHHHHh
Confidence 99999987654
No 188
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.20 E-value=5.9e-11 Score=101.00 Aligned_cols=105 Identities=17% Similarity=0.304 Sum_probs=80.6
Q ss_pred CCcceEE-eC--CcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeC--------
Q 021221 56 QDIVGVI-EG--DEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEES-------- 121 (316)
Q Consensus 56 ~~~v~~l-~~--~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~-------- 121 (316)
+..+..+ +| +.+++.++ .+++++|.|| ++||++|+...|.+.++.++|.+ +.++.+...
T Consensus 13 ~f~l~~~~~g~~~~v~l~~~-------~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~ 85 (197)
T 1qmv_A 13 DFKATAVVDGAFKEVKLSDY-------KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAW 85 (197)
T ss_dssp CCEEEEEETTEEEEEEGGGG-------TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHH
T ss_pred CeEeEeecCCCccEEEHHHH-------CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHH
Confidence 4445544 56 77777776 6789999999 99999999999999999998853 444544321
Q ss_pred -------------------CCChhhHhhcCCC------ccceEEEE--eCceeEEEeCC----CCHHHHHHHHHHhh
Q 021221 122 -------------------AIRPSILSKYGVH------GFPTLFLL--NSSMRVRYHGS----RTLDSLVAFYSDVT 167 (316)
Q Consensus 122 -------------------~~~~~l~~~~~I~------~~Pti~l~--~g~~~~~~~G~----~~~~~l~~fi~~~~ 167 (316)
+...++++.|+|. ++|+++++ +|+.+..+.|. ++.+++.+.|++..
T Consensus 86 ~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 86 INTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 1134789999999 89999999 68888887774 46789999888765
No 189
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.20 E-value=2e-11 Score=103.91 Aligned_cols=106 Identities=13% Similarity=0.166 Sum_probs=80.5
Q ss_pred CCcceEE--eCC---cccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeC------
Q 021221 56 QDIVGVI--EGD---EVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEES------ 121 (316)
Q Consensus 56 ~~~v~~l--~~~---~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~------ 121 (316)
+..+... +|+ .+++.+. -.+++++|+|| ++||++|+.+.|.++++.++|++ +..+.+...
T Consensus 9 ~f~l~~~~~~G~~~~~v~l~~~------~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 82 (198)
T 1zof_A 9 DFKAPAVLGNNEVDEHFELSKN------LGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHF 82 (198)
T ss_dssp CCEEEEECTTSCEEEEEETTTS------CCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHH
T ss_pred ceEeecccCCCcccceEEHHHH------hCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHH
Confidence 4445555 566 6665543 15789999999 99999999999999999998853 444444311
Q ss_pred ---------------------CCChhhHhhcCCC-----ccceEEEE--eCceeEEEeCCC----CHHHHHHHHHHhh
Q 021221 122 ---------------------AIRPSILSKYGVH-----GFPTLFLL--NSSMRVRYHGSR----TLDSLVAFYSDVT 167 (316)
Q Consensus 122 ---------------------~~~~~l~~~~~I~-----~~Pti~l~--~g~~~~~~~G~~----~~~~l~~fi~~~~ 167 (316)
+...++++.|+|. ++|+++++ +|+.+.++.|.. +.++|.+.|++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 83 AWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HHHHhhhhcccccCceeEEEECCchHHHHHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 1145789999999 99999999 688888888864 6789999988765
No 190
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.19 E-value=2.4e-11 Score=102.37 Aligned_cols=103 Identities=17% Similarity=0.063 Sum_probs=75.5
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeCCC-------C--
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAI-------R-- 124 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~~~-------~-- 124 (316)
+..+..++|+.+++.+. .+++++|.||++||++|+...|.++++.++|++ +..+.+. ++. .
T Consensus 31 ~f~l~~~~G~~v~l~~~-------~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is-~d~~~~~~~~~~~ 102 (185)
T 2gs3_A 31 EFSAKDIDGHMVNLDKY-------RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFP-CNQFGKQEPGSNE 102 (185)
T ss_dssp GCEEEBTTSCEEEGGGG-------TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEE-CCTTTTCCCSCHH
T ss_pred CceeEcCCCCEeeHHHc-------CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEE-CcccCCCCCCCHH
Confidence 44456667888777776 679999999999999999999999999999875 4455553 210 0
Q ss_pred --hhhHhhc-------------------------------CCC-----ccceEEEE--eCceeEEEeCCCCHHHHHHHHH
Q 021221 125 --PSILSKY-------------------------------GVH-----GFPTLFLL--NSSMRVRYHGSRTLDSLVAFYS 164 (316)
Q Consensus 125 --~~l~~~~-------------------------------~I~-----~~Pti~l~--~g~~~~~~~G~~~~~~l~~fi~ 164 (316)
.+.++++ |+. .+|+++++ +|+.+.++.|..+.++|.+.|+
T Consensus 103 ~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 182 (185)
T 2gs3_A 103 EIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLP 182 (185)
T ss_dssp HHHHHHHHTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHH
T ss_pred HHHHHHHHcCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHHH
Confidence 1122222 322 35899999 7888899999888888888887
Q ss_pred Hh
Q 021221 165 DV 166 (316)
Q Consensus 165 ~~ 166 (316)
+.
T Consensus 183 ~l 184 (185)
T 2gs3_A 183 HY 184 (185)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 191
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.19 E-value=8.4e-11 Score=114.90 Aligned_cols=83 Identities=16% Similarity=0.246 Sum_probs=72.2
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEEeCceeEEEeCCCCHHHH
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSL 159 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l 159 (316)
.++..++.||++||++|+.+.|.+++++..+++ +.+...|.+.+++++++|+|.++||+++ ||+.+.. |..+.++|
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~~-v~~~~vd~~~~~~~~~~~~i~svPt~~i-~g~~~~~--G~~~~~~l 191 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNPR-IKHTAIDGGTFQNEITERNVMGVPAVFV-NGKEFGQ--GRMTLTEI 191 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCTT-EEEEEEETTTCHHHHHHTTCCSSSEEEE-TTEEEEE--SCCCHHHH
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcCc-eEEEEEechhhHHHHHHhCCCccCEEEE-CCEEEec--CCCCHHHH
Confidence 466789999999999999999999999999884 5566667889999999999999999977 8877643 99999999
Q ss_pred HHHHHHh
Q 021221 160 VAFYSDV 166 (316)
Q Consensus 160 ~~fi~~~ 166 (316)
.+++.+.
T Consensus 192 ~~~l~~~ 198 (521)
T 1hyu_A 192 VAKVDTG 198 (521)
T ss_dssp HHHHCCS
T ss_pred HHHHhhc
Confidence 9998764
No 192
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.16 E-value=2.7e-11 Score=105.67 Aligned_cols=147 Identities=16% Similarity=0.148 Sum_probs=106.4
Q ss_pred cCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-e-CceeEEEeC----
Q 021221 79 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-N-SSMRVRYHG---- 152 (316)
Q Consensus 79 ~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~-g~~~~~~~G---- 152 (316)
+.++.++|-|+++|| ..+.+.|.++|+.++ ...++.. .+++++++|+|++ |++++| + ......|.|
T Consensus 25 ~~~~v~vVgff~~~~---~~~~~~f~~~A~~l~-~~~F~~t---~~~~v~~~~~v~~-p~i~lfk~~~~~~~~~~~~~~g 96 (227)
T 4f9z_D 25 AATEVAVIGFFQDLE---IPAVPILHSMVQKFP-GVSFGIS---TDSEVLTHYNITG-NTICLFRLVDNEQLNLEDEDIE 96 (227)
T ss_dssp HTSSEEEEEECSCSC---STHHHHHHHHTTTCT-TSEEEEE---CCHHHHHHTTCCS-SEEEEEETTTTEEEEECHHHHH
T ss_pred hcCCeEEEEEecCCC---chhHHHHHHHHHhCC-CceEEEE---CCHHHHHHcCCCC-CeEEEEEecCcccccccccccC
Confidence 467899999999994 688999999999995 4555543 3578999999998 999999 3 345677884
Q ss_pred CCCHHHHHHHHHHhhCCCCC-CCcccccccCccc-cCCCccccccCCcccCChhhhhchHHHHHHHHHHHH---------
Q 021221 153 SRTLDSLVAFYSDVTASLDK-ISPDKVGKASNHE-KHNNTEEESCPFSWARSPENLLQQETYLALATAFVL--------- 221 (316)
Q Consensus 153 ~~~~~~l~~fi~~~~~~~~~-~~~~~~~~~~~~~-~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~--------- 221 (316)
.++.++|.+||.++.-+... .+.+......... ...++.| .. +||.+|+++ .+.|..+|..|..
T Consensus 97 ~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~l~f-~~--~~~~~~~~~--~~~~~~vAk~~k~~i~F~~vd~ 171 (227)
T 4f9z_D 97 SIDATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLI-MN--KASPEYEEN--MHRYQKAAKLFQGKILFILVDS 171 (227)
T ss_dssp TCCHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEEEEE-EC--TTSTTHHHH--HHHHHHHHHHTTTTCEEEEEET
T ss_pred CCCHHHHHHHHHHhCCCceeecCcccHHHHhccCCceEEEEE-Ec--CCcchHHHH--HHHHHHHHHHhhCCEEEEEeCC
Confidence 79999999999999765432 2332221111111 1122233 45 899999999 9999999998853
Q ss_pred ---------HHhHHh--hhhhHhHhhcc
Q 021221 222 ---------LRLVYI--FLPTLLIFAQF 238 (316)
Q Consensus 222 ---------~~~~i~--~~Ptl~~~~~~ 238 (316)
..+++. .+|++.++...
T Consensus 172 ~~~~~~~~l~~fgl~~~~~P~~~i~~~~ 199 (227)
T 4f9z_D 172 GMKENGKVISFFKLKESQLPALAIYQTL 199 (227)
T ss_dssp TSGGGHHHHHHTTCCGGGCSEEEEEESS
T ss_pred ccHhHHHHHHHcCCCcccCCEEEEEECC
Confidence 456666 78998888643
No 193
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=99.15 E-value=2.4e-11 Score=88.17 Aligned_cols=73 Identities=16% Similarity=0.201 Sum_probs=51.4
Q ss_pred EEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCC-CChhhHhhcCCCccceEEEEeCceeEEEeCCC-CHHHH
Q 021221 84 VAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA-IRPSILSKYGVHGFPTLFLLNSSMRVRYHGSR-TLDSL 159 (316)
Q Consensus 84 vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~-~~~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~-~~~~l 159 (316)
.++.||++|||+|+++.|.++++.+.+.....+..++.+ +..+++++|||+++||+++ +|+.+ +.|.. +.++|
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i-~g~~~--~~G~~~~~~~l 77 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKSVPALVI-DGAAF--HINFGAGIDDL 77 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCEEEEEEE-TTEEE--EEEEEEEHHHH
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCcCCEEEE-CCEEE--EeccCcCHHHh
Confidence 378899999999999999999988776422112112222 4678999999999999877 77654 24432 44444
No 194
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.14 E-value=1.4e-10 Score=99.21 Aligned_cols=105 Identities=17% Similarity=0.265 Sum_probs=80.0
Q ss_pred CCcceEE--eC--CcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcC--CCcEEEEEeC-------
Q 021221 56 QDIVGVI--EG--DEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEES------- 121 (316)
Q Consensus 56 ~~~v~~l--~~--~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~--~~~~v~~~~~------- 121 (316)
+..+... +| +.+++.++ .+++++|.|| ++||++|+...|.++++.++|. ++.++.+...
T Consensus 14 ~f~l~~~~~~g~~~~v~l~~~-------~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~ 86 (202)
T 1uul_A 14 DFNETALMPNGTFKKVALTSY-------KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLA 86 (202)
T ss_dssp CCEEEEECTTSCEEEEEGGGG-------TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHH
T ss_pred CcEeeeeecCCCccEEEHHHh-------CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHH
Confidence 3444444 46 67777766 5789999999 9999999999999999999984 4555555321
Q ss_pred --------------------CCChhhHhhcCCC------ccceEEEE--eCceeEEEeCC----CCHHHHHHHHHHhh
Q 021221 122 --------------------AIRPSILSKYGVH------GFPTLFLL--NSSMRVRYHGS----RTLDSLVAFYSDVT 167 (316)
Q Consensus 122 --------------------~~~~~l~~~~~I~------~~Pti~l~--~g~~~~~~~G~----~~~~~l~~fi~~~~ 167 (316)
+...++++.|||. ++|+++++ +|+.+..+.|. ++.+++.+.|++..
T Consensus 87 ~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 87 WTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 1145788999999 99999999 67777777664 45689998888765
No 195
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=99.12 E-value=7.7e-11 Score=86.07 Aligned_cols=75 Identities=17% Similarity=0.274 Sum_probs=57.7
Q ss_pred EEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCC----ChhhHhhcC--CCccceEEEEeCceeEEEeCCCCHHH
Q 021221 85 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAI----RPSILSKYG--VHGFPTLFLLNSSMRVRYHGSRTLDS 158 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~----~~~l~~~~~--I~~~Pti~l~~g~~~~~~~G~~~~~~ 158 (316)
++.|+++|||+|+++.+.+++++..++++....+ |.+. ..++.+++| +.++|++ +++|+.+. | .++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~v-di~~~~~~~~~l~~~~~~~~~~vP~i-~~~g~~i~---~---~~~ 74 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYV-DIRAEGITKEDLQQKAGKPVETVPQI-FVDQQHIG---G---YTD 74 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSSCEEEEE-CHHHHTCCSHHHHHHTCCCSCCSCEE-EETTEEEE---S---SHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCCceEEEE-ecccChHHHHHHHHHhCCCCceeCeE-EECCEEEE---C---HHH
Confidence 6789999999999999999999998877554444 3322 247999999 9999998 34776542 2 378
Q ss_pred HHHHHHHhh
Q 021221 159 LVAFYSDVT 167 (316)
Q Consensus 159 l~~fi~~~~ 167 (316)
|.+++++..
T Consensus 75 l~~~~~~~~ 83 (85)
T 1ego_A 75 FAAWVKENL 83 (85)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 888888764
No 196
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.11 E-value=1.3e-10 Score=96.26 Aligned_cols=105 Identities=13% Similarity=0.178 Sum_probs=78.0
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCCh-HHHhhhHHHHHHHHHcCC----CcEEEEEeCCC-------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCP-FSRNFRPSFSVLSSLYSS----IPHFAIEESAI------- 123 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~-~Ck~~~p~~~~la~~~~~----~~~v~~~~~~~------- 123 (316)
+..+...+|+.+++.++ .+++++|.||++||+ +|+...|.+.++.+.|++ +.++.+. .+.
T Consensus 15 ~f~l~~~~G~~~~l~~~-------~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is-~d~~~d~~~~ 86 (174)
T 1xzo_A 15 PFTFQNQDGKNVSLESL-------KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFS-VDPENDKPKQ 86 (174)
T ss_dssp CCEEECTTSCEEETGGG-------TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEE-SCTTTCCHHH
T ss_pred CcEEEcCCCCEEehhhc-------CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEE-eCCCCCCHHH
Confidence 44455567888777776 679999999999999 999999999999988753 4455553 221
Q ss_pred ---------------------ChhhHhh----------------cCCCccceEEEE--eCceeEEEeCCC--CHHHHHHH
Q 021221 124 ---------------------RPSILSK----------------YGVHGFPTLFLL--NSSMRVRYHGSR--TLDSLVAF 162 (316)
Q Consensus 124 ---------------------~~~l~~~----------------~~I~~~Pti~l~--~g~~~~~~~G~~--~~~~l~~f 162 (316)
..++.+. |++...|+++++ +|+.+.++.|.. +.++|.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~ 166 (174)
T 1xzo_A 87 LKKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISD 166 (174)
T ss_dssp HHHHHTTSCCCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHH
T ss_pred HHHHHHHcCCCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHH
Confidence 1122222 346778998888 788888899876 58999999
Q ss_pred HHHhhC
Q 021221 163 YSDVTA 168 (316)
Q Consensus 163 i~~~~~ 168 (316)
|++.+.
T Consensus 167 l~~ll~ 172 (174)
T 1xzo_A 167 VKSAST 172 (174)
T ss_dssp HHHHTC
T ss_pred HHHHHh
Confidence 998765
No 197
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.11 E-value=1.2e-10 Score=99.39 Aligned_cols=105 Identities=13% Similarity=0.105 Sum_probs=76.7
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChH-HHhhhHHHHHHHHHcC-----CCcEEEEEeCCC------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPF-SRNFRPSFSVLSSLYS-----SIPHFAIEESAI------ 123 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~-Ck~~~p~~~~la~~~~-----~~~~v~~~~~~~------ 123 (316)
+..+...+|+.+++.+. .+++++|.||++||++ |+...|.++++.+.+. ++..+.+. .|.
T Consensus 23 ~f~l~d~~G~~v~l~~~-------~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is-~D~~~d~~~ 94 (200)
T 2b7k_A 23 PFHLEDMYGNEFTEKNL-------LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFIT-CDPARDSPA 94 (200)
T ss_dssp CCEEEETTSCEEEGGGG-------TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE-SCTTTCCHH
T ss_pred CEEEEcCCCCEEeHHHc-------CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEE-CCCCCCCHH
Confidence 44556667888887766 6799999999999997 9999999999777653 44445443 221
Q ss_pred ----------------------ChhhHhhcCCC-ccc---------------eEEEE--eCceeEEEeCCCCHHHHHHHH
Q 021221 124 ----------------------RPSILSKYGVH-GFP---------------TLFLL--NSSMRVRYHGSRTLDSLVAFY 163 (316)
Q Consensus 124 ----------------------~~~l~~~~~I~-~~P---------------ti~l~--~g~~~~~~~G~~~~~~l~~fi 163 (316)
...+++.|||. +.| +++++ +|+.+..+.|..+.+.+.+.|
T Consensus 95 ~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i 174 (200)
T 2b7k_A 95 VLKEYLSDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKI 174 (200)
T ss_dssp HHHHHHTTSCTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHH
T ss_pred HHHHHHHHcCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHH
Confidence 12577889987 454 67777 788888888888888888888
Q ss_pred HHhhC
Q 021221 164 SDVTA 168 (316)
Q Consensus 164 ~~~~~ 168 (316)
.+.+.
T Consensus 175 ~~~l~ 179 (200)
T 2b7k_A 175 VEHVK 179 (200)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87765
No 198
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.10 E-value=1.7e-10 Score=96.40 Aligned_cols=105 Identities=12% Similarity=0.095 Sum_probs=75.7
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCC-ChHHHhhhHHHHHHHHHcCCCcEEEEEeC-------------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASW-CPFSRNFRPSFSVLSSLYSSIPHFAIEES------------- 121 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~W-C~~Ck~~~p~~~~la~~~~~~~~v~~~~~------------- 121 (316)
+..+...+|+.+++.++ .+++++|.||++| |++|+...|.++++.++ +++.++.+.-.
T Consensus 26 ~f~l~~~~G~~v~l~~~-------~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~~v~vv~Is~D~~~~~~~~~~~~~ 97 (175)
T 1xvq_A 26 AFTLTGGDLGVISSDQF-------RGKSVLLNIFPSVDTPVCATSVRTFDERAAA-SGATVLCVSKDLPFAQKRFCGAEG 97 (175)
T ss_dssp CCEEECTTSCEEEGGGG-------TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-TTCEEEEEESSCHHHHTTCC----
T ss_pred CeEEECCCCCEEeHHHc-------CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-cCCEEEEEECCCHHHHHHHHHHcC
Confidence 34455566777777666 6789999999999 99999999999999988 76655555321
Q ss_pred --------CCChhhHhhcCCCcc---------ceEEEE--eCceeEEEeC--CC---CHHHHHHHHHHhhC
Q 021221 122 --------AIRPSILSKYGVHGF---------PTLFLL--NSSMRVRYHG--SR---TLDSLVAFYSDVTA 168 (316)
Q Consensus 122 --------~~~~~l~~~~~I~~~---------Pti~l~--~g~~~~~~~G--~~---~~~~l~~fi~~~~~ 168 (316)
+...++.+.|+|... |+++++ +|+.+..+.| .. +.+++.+.+.+..|
T Consensus 98 ~~~~~~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~~~~~ 168 (175)
T 1xvq_A 98 TENVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALGATSG 168 (175)
T ss_dssp --CEEEEECTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHHHTC-
T ss_pred CCCceEeeCCHHHHHHHhCCcccccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHHhhcC
Confidence 113568899999887 899888 6888888863 22 44555555554444
No 199
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.09 E-value=8.3e-10 Score=96.90 Aligned_cols=132 Identities=8% Similarity=0.107 Sum_probs=87.1
Q ss_pred CCcceEE-eCC--cccHHH-HHhHHhccCCCeEEEEEE-cCCChHHH-hhhHHHHHHHHHcC--CC-cEEEEEeC-----
Q 021221 56 QDIVGVI-EGD--EVSLQM-ALNMVHKNSHEYVAVLFY-ASWCPFSR-NFRPSFSVLSSLYS--SI-PHFAIEES----- 121 (316)
Q Consensus 56 ~~~v~~l-~~~--~~~~~~-~~~~i~~~~~~~vlV~Fy-a~WC~~Ck-~~~p~~~~la~~~~--~~-~~v~~~~~----- 121 (316)
+..+..+ +++ .+++.+ . .+++++|.|| ++||++|+ ...|.|+++.++|. ++ ..+++...
T Consensus 11 ~f~l~~~~~g~~~~v~l~~~~-------~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~ 83 (241)
T 1nm3_A 11 QVTFRTRQGDKWVDVTTSELF-------DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVM 83 (241)
T ss_dssp CCEEEEEETTEEEEEEHHHHH-------TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHH
T ss_pred CeEEEcccCCCceeecHHHHh-------CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHH
Confidence 3444554 455 778888 5 6789999999 99999999 99999999998874 45 55555321
Q ss_pred ----------------CCChhhHhhcCCC-----------ccceEEEE-eCceeEEEeCC---------CCHHHHHHHHH
Q 021221 122 ----------------AIRPSILSKYGVH-----------GFPTLFLL-NSSMRVRYHGS---------RTLDSLVAFYS 164 (316)
Q Consensus 122 ----------------~~~~~l~~~~~I~-----------~~Pti~l~-~g~~~~~~~G~---------~~~~~l~~fi~ 164 (316)
|.+..+++.||+. ..|+++++ +|+.+..+.|. .+.+++.+.+.
T Consensus 84 ~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~ 163 (241)
T 1nm3_A 84 NAWKEDEKSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNEPGDPFKVSDADTMLKYLA 163 (241)
T ss_dssp HHHHHHTTCTTSEEEECTTSHHHHHTTCEEECTTTTCCEEECCEEEEEETTEEEEEEECCSCSSCCCSSSSHHHHHHHHC
T ss_pred HHHHHhcCCCceEEEECCCcHHHHHhCceeecccccCcccceeEEEEEECCEEEEEEEeccCCCccceecCHHHHHHHhh
Confidence 1123577888886 45898888 78777777775 34555555554
Q ss_pred HhhCCCCCCCcccccccCccccCCCccccccCCcccCChhhhhchHHHHHH
Q 021221 165 DVTASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLAL 215 (316)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~l 215 (316)
... . .. ...+-| .. |||..|++. +..+...
T Consensus 164 ~~~-----------i---~~--~~i~ly-~~--~~Cp~C~~a--~~~L~~~ 193 (241)
T 1nm3_A 164 PQH-----------Q---VQ--ESISIF-TK--PGCPFCAKA--KQLLHDK 193 (241)
T ss_dssp TTS-----------C---CC--CCEEEE-EC--SSCHHHHHH--HHHHHHH
T ss_pred hhc-----------c---cc--ceEEEE-EC--CCChHHHHH--HHHHHHc
Confidence 211 0 01 112223 44 999999997 5444443
No 200
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.09 E-value=2.7e-10 Score=98.94 Aligned_cols=98 Identities=18% Similarity=0.279 Sum_probs=77.1
Q ss_pred CCcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcC--CCcEEEEEeC-------------------
Q 021221 64 GDEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEES------------------- 121 (316)
Q Consensus 64 ~~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~--~~~~v~~~~~------------------- 121 (316)
++.+++.++ .+++++|.|| ++||++|+...|.++++.++|. ++.++.+...
T Consensus 46 g~~v~l~d~-------~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~ 118 (220)
T 1zye_A 46 FKEISLDDF-------KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLG 118 (220)
T ss_dssp EEEEEGGGG-------TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCC
T ss_pred CcEEEHHHh-------CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCc
Confidence 466666666 5699999999 9999999999999999999984 5555555321
Q ss_pred --------CCChhhHhhcCCC------ccceEEEE--eCceeEEEeCC----CCHHHHHHHHHHhhC
Q 021221 122 --------AIRPSILSKYGVH------GFPTLFLL--NSSMRVRYHGS----RTLDSLVAFYSDVTA 168 (316)
Q Consensus 122 --------~~~~~l~~~~~I~------~~Pti~l~--~g~~~~~~~G~----~~~~~l~~fi~~~~~ 168 (316)
|...++++.|||. ++|+++++ +|+.+..+.|. ++.+++.+.|++...
T Consensus 119 ~~~fp~l~D~~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~~ 185 (220)
T 1zye_A 119 HMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQF 185 (220)
T ss_dssp SCSSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHH
T ss_pred CCceEEEECCcHHHHHHhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhhh
Confidence 1245789999999 99999999 67777777765 467899999987764
No 201
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.08 E-value=3.2e-10 Score=95.93 Aligned_cols=106 Identities=15% Similarity=0.235 Sum_probs=79.3
Q ss_pred CCcceEE--eC--CcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcC--CCcEEEEEeC-------
Q 021221 56 QDIVGVI--EG--DEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEES------- 121 (316)
Q Consensus 56 ~~~v~~l--~~--~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~--~~~~v~~~~~------- 121 (316)
+..+... +| +.+++.++ -.+++++|.|| ++||++|+...|.+.++.++|. ++.++.+...
T Consensus 8 ~f~l~~~~~~G~~~~~~l~~~------~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~ 81 (192)
T 2h01_A 8 SFKAEAVFGDNTFGEVSLSDF------IGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLA 81 (192)
T ss_dssp CCEEEEECTTSCEEEEEGGGG------TTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHH
T ss_pred CcEeEeeecCCceeEEeHHHH------cCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHH
Confidence 3444555 66 67666554 15789999999 9999999999999999999884 4555554321
Q ss_pred --------------------CCChhhHhhcCCC-----ccceEEEE--eCceeEEEeCC----CCHHHHHHHHHHhh
Q 021221 122 --------------------AIRPSILSKYGVH-----GFPTLFLL--NSSMRVRYHGS----RTLDSLVAFYSDVT 167 (316)
Q Consensus 122 --------------------~~~~~l~~~~~I~-----~~Pti~l~--~g~~~~~~~G~----~~~~~l~~fi~~~~ 167 (316)
+...++++.|||. .+|+++++ +|+.+..+.|. ++.+++.+.|++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 82 WKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 1135788999999 89999999 67777777774 35788888887765
No 202
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.08 E-value=4.3e-10 Score=97.73 Aligned_cols=104 Identities=20% Similarity=0.285 Sum_probs=77.2
Q ss_pred CCcceEE-e--CCcccHHHHHhHHhccCCCeEEEEEEc-CCChHHHhhhHHHHHHHHHcCC--CcEEEEEeCC-------
Q 021221 56 QDIVGVI-E--GDEVSLQMALNMVHKNSHEYVAVLFYA-SWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESA------- 122 (316)
Q Consensus 56 ~~~v~~l-~--~~~~~~~~~~~~i~~~~~~~vlV~Fya-~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~~------- 122 (316)
+..+..+ + |+.+++.++ .+++++|.||+ +||++|+...|.++++.++|++ +.++.+...+
T Consensus 48 ~f~l~~~~d~~G~~v~l~~~-------~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~ 120 (222)
T 3ztl_A 48 EFKGQAVINGEFKEICLKDY-------RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAW 120 (222)
T ss_dssp CCEEEEEETTEEEEEEGGGG-------TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHH
T ss_pred CeEEecccCCCCcEEeHHHh-------CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHH
Confidence 4445544 3 377777776 67999999997 9999999999999999999854 4444443111
Q ss_pred --------------------CChhhHhhcCCC------ccceEEEE--eCceeEEEeCC----CCHHHHHHHHHHh
Q 021221 123 --------------------IRPSILSKYGVH------GFPTLFLL--NSSMRVRYHGS----RTLDSLVAFYSDV 166 (316)
Q Consensus 123 --------------------~~~~l~~~~~I~------~~Pti~l~--~g~~~~~~~G~----~~~~~l~~fi~~~ 166 (316)
....+.+.|+|. ++|+++++ +|+.+..+.|. ...+++.+.|+..
T Consensus 121 ~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 121 DNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp HHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHhhhhccccccceeEEeCCchHHHHHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 134678899999 89999999 67877787765 3467777777654
No 203
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.07 E-value=5.5e-10 Score=96.49 Aligned_cols=106 Identities=15% Similarity=0.238 Sum_probs=80.1
Q ss_pred CCcceEE--eC--CcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcC--CCcEEEEEeC-------
Q 021221 56 QDIVGVI--EG--DEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEES------- 121 (316)
Q Consensus 56 ~~~v~~l--~~--~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~--~~~~v~~~~~------- 121 (316)
+..+..+ +| +.+++.++ -.+++++|.|| ++||++|+...|.+.+++++|+ ++.++.+...
T Consensus 29 ~f~l~~~~~~G~~~~v~l~d~------~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~ 102 (213)
T 2i81_A 29 FFKAEAVFGDNSFGEVNLTQF------IGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLA 102 (213)
T ss_dssp CCEEEEECTTSCEEEEEGGGG------TTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHH
T ss_pred CeEeeccccCCceeEEeHHHH------cCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHH
Confidence 4455555 67 67666554 15789999999 9999999999999999999884 4555554311
Q ss_pred --------------------CCChhhHhhcCCC-----ccceEEEE--eCceeEEEeCC----CCHHHHHHHHHHhh
Q 021221 122 --------------------AIRPSILSKYGVH-----GFPTLFLL--NSSMRVRYHGS----RTLDSLVAFYSDVT 167 (316)
Q Consensus 122 --------------------~~~~~l~~~~~I~-----~~Pti~l~--~g~~~~~~~G~----~~~~~l~~fi~~~~ 167 (316)
|...++++.|||. .+|+++++ +|+.+..+.|. ++.+++.+.|+...
T Consensus 103 ~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 103 WKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHhhCCccCCCceEEECCchHHHHHhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 1245789999999 89999999 67777777664 35889998888765
No 204
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.05 E-value=4e-10 Score=92.42 Aligned_cols=101 Identities=13% Similarity=0.239 Sum_probs=75.1
Q ss_pred ceEEeCCcccHHHHHhHHhccCCCeEEEEEEc-CCChHHHhhhHHHHHHHHHcCC--CcEEEEEeC--------------
Q 021221 59 VGVIEGDEVSLQMALNMVHKNSHEYVAVLFYA-SWCPFSRNFRPSFSVLSSLYSS--IPHFAIEES-------------- 121 (316)
Q Consensus 59 v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya-~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~-------------- 121 (316)
+...+|+.+++.+. .+++++|.||+ +||++|+...|.++++.++|++ +..+.+...
T Consensus 20 l~~~~G~~~~l~~~-------~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~ 92 (163)
T 3gkn_A 20 LSLSGGTQTTLRAH-------AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGF 92 (163)
T ss_dssp EECSTTCEECSGGG-------TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCC
T ss_pred ccCCCCCEEEHHHh-------CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCC
Confidence 55567788777766 57899999998 9999999999999999998853 444444321
Q ss_pred ------CCChhhHhhcCCCc------------cceEEEE--eCceeEEEeCCCC---HHHHHHHHHHh
Q 021221 122 ------AIRPSILSKYGVHG------------FPTLFLL--NSSMRVRYHGSRT---LDSLVAFYSDV 166 (316)
Q Consensus 122 ------~~~~~l~~~~~I~~------------~Pti~l~--~g~~~~~~~G~~~---~~~l~~fi~~~ 166 (316)
+...++.+.||+.. +|+++++ +|+.+..+.|... .+++.+.+++.
T Consensus 93 ~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 93 AFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp SSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred CceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 12347788899987 9999999 6777777765433 46666666654
No 205
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=99.02 E-value=8.8e-10 Score=91.66 Aligned_cols=83 Identities=17% Similarity=0.258 Sum_probs=65.9
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeC--------------------------------------
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEES-------------------------------------- 121 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~-------------------------------------- 121 (316)
+++++|+.|+.+|||+|+++.|.++++.+.++++ .+.....
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~v-~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~~ 99 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPNV-RLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKAN 99 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTE-EEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCCE-EEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCC
Confidence 5688999999999999999999999999998773 2222221
Q ss_pred -------------------------------CCChhhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHHHHHHHhh
Q 021221 122 -------------------------------AIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 122 -------------------------------~~~~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~fi~~~~ 167 (316)
+.+..+++++||.++||+++ +|+ .+.|..+.+.|.+.|++.+
T Consensus 100 ~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i-~g~---~~~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 100 ETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV-EDA---LVPGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE-TTE---EECSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE-CCE---EeeCCCCHHHHHHHHHHHH
Confidence 12235678899999999986 773 6679999999999998765
No 206
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=99.02 E-value=2.3e-10 Score=99.12 Aligned_cols=83 Identities=17% Similarity=0.266 Sum_probs=62.4
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEE---------------------------------------e
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIE---------------------------------------E 120 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~---------------------------------------~ 120 (316)
+++++++.||++|||+|+++.|.++++.+. ++....+. .
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~--~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~~ 162 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL--GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPAS 162 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT--TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC--CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChhH
Confidence 468999999999999999999999998763 22111110 1
Q ss_pred C----CCChhhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHHHHHHHhh
Q 021221 121 S----AIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 121 ~----~~~~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~fi~~~~ 167 (316)
| +.+.++++++||+++||+++.+|. .+.|..+.++|.++|++..
T Consensus 163 ~~~~v~~~~~l~~~~gV~gtPt~v~~dG~---~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 163 CDVDIADHYALGVQLGVSGTPAVVLSNGT---LVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CSCCHHHHHHHHHHHTCCSSSEEECTTSC---EEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCccCEEEEcCCe---EecCCCCHHHHHHHHHHhh
Confidence 1 123568899999999999543773 5679999999999998754
No 207
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.01 E-value=4.9e-10 Score=97.04 Aligned_cols=105 Identities=11% Similarity=0.061 Sum_probs=78.1
Q ss_pred CCcceEEe-CCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeC-------CC--
Q 021221 56 QDIVGVIE-GDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEES-------AI-- 123 (316)
Q Consensus 56 ~~~v~~l~-~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~-------~~-- 123 (316)
+..+..++ |+.+++.++ .++++||.|||+||++|+ ..|.++++.++|.+ +..+++.-. +.
T Consensus 37 dF~l~d~~~G~~v~Lsd~-------~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~~ 108 (215)
T 2i3y_A 37 DYEAIALNKNEYVSFKQY-------VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNK 108 (215)
T ss_dssp GCEEEBSSSSCEEEGGGG-------TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHH
T ss_pred CcEeeeCCCCCEEcHHHh-------CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCHH
Confidence 34456667 888888887 789999999999999999 89999999999864 555555311 00
Q ss_pred -ChhhHh------hcCCC-------------------------------------------------ccceEEEE--eCc
Q 021221 124 -RPSILS------KYGVH-------------------------------------------------GFPTLFLL--NSS 145 (316)
Q Consensus 124 -~~~l~~------~~~I~-------------------------------------------------~~Pti~l~--~g~ 145 (316)
..+.++ +|++. ..||.+++ +|+
T Consensus 109 ~i~~f~~~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~ 188 (215)
T 2i3y_A 109 EILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGI 188 (215)
T ss_dssp HHHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSC
T ss_pred HHHHHHHhccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCe
Confidence 123344 44431 11688888 788
Q ss_pred eeEEEeCCCCHHHHHHHHHHhhC
Q 021221 146 MRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 146 ~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
.+.+|.|..+.++|.+.|++.+.
T Consensus 189 vv~~~~g~~~~~~l~~~I~~ll~ 211 (215)
T 2i3y_A 189 PVMRWSHRATVSSVKTDILAYLK 211 (215)
T ss_dssp EEEEECTTSCHHHHHHHHHHHGG
T ss_pred EEEEeCCCCCHHHHHHHHHHHHH
Confidence 89999999899999999998875
No 208
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.01 E-value=1.7e-09 Score=88.53 Aligned_cols=96 Identities=13% Similarity=0.176 Sum_probs=69.2
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcCCC-cEEEEEeC------------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSSI-PHFAIEES------------ 121 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~~~-~~v~~~~~------------ 121 (316)
+..+...+|+.+++.+. ..++++++|.|| ++||++|+...|.+.++.++|.+. ..+.+...
T Consensus 15 ~f~l~~~~G~~v~l~~~-----~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~ 89 (159)
T 2a4v_A 15 DLSLLNEDNDSISLKKI-----TENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQ 89 (159)
T ss_dssp SCEEECTTSCEEEHHHH-----HHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHH
T ss_pred CeEEECCCCCEEeHHHH-----hCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHh
Confidence 34455567888888887 222347899987 999999999999999999988642 33333210
Q ss_pred --------CCChhhHhhcCCCccc------eEEEE-eCceeEEEeCCCCH
Q 021221 122 --------AIRPSILSKYGVHGFP------TLFLL-NSSMRVRYHGSRTL 156 (316)
Q Consensus 122 --------~~~~~l~~~~~I~~~P------ti~l~-~g~~~~~~~G~~~~ 156 (316)
|.+.++++.||+...| +++++ +|+.+..+.|....
T Consensus 90 ~~~~~~l~D~~~~~~~~~gv~~~p~~g~~~~~~li~~G~i~~~~~g~~~~ 139 (159)
T 2a4v_A 90 NLPYHLLSDPKREFIGLLGAKKTPLSGSIRSHFIFVDGKLKFKRVKISPE 139 (159)
T ss_dssp TCSSEEEECTTCHHHHHHTCBSSSSSCBCCEEEEEETTEEEEEEESCCHH
T ss_pred CCCceEEECCccHHHHHhCCcccccCCccceEEEEcCCEEEEEEccCCcc
Confidence 2244688899999998 66666 67777888886544
No 209
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.97 E-value=3.2e-10 Score=93.07 Aligned_cols=104 Identities=14% Similarity=0.217 Sum_probs=69.5
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeC-----------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEES----------- 121 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~----------- 121 (316)
+..+...+|+.+++.++ .+++++|.|| ++||++|+...|.++++.++|.+ +..+++...
T Consensus 12 dF~l~~~~G~~~~l~d~-------~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~ 84 (157)
T 4g2e_A 12 DFELPDTELKKVKLSAL-------KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEH 84 (157)
T ss_dssp CCEEEBTTSCEEEGGGG-------TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHH
T ss_pred CeEeECCCCCEEeHHHH-------CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHH
Confidence 45556667888888776 6789999999 99999999999999999888764 444444211
Q ss_pred ---------CCChhhHhhcCCC-----------ccceEEEE--eCceeEEEeC-----CCCHHHHHHHHHHh
Q 021221 122 ---------AIRPSILSKYGVH-----------GFPTLFLL--NSSMRVRYHG-----SRTLDSLVAFYSDV 166 (316)
Q Consensus 122 ---------~~~~~l~~~~~I~-----------~~Pti~l~--~g~~~~~~~G-----~~~~~~l~~fi~~~ 166 (316)
|.+.++++.|||. ..|+++++ +|+.+..+.| ..+.+++.+.|+..
T Consensus 85 ~~~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 85 NKLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp TTCCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHHT
T ss_pred cCCcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHh
Confidence 1234677888874 46888888 5766666543 34678888888754
No 210
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.95 E-value=2.9e-09 Score=87.59 Aligned_cols=103 Identities=10% Similarity=0.022 Sum_probs=74.4
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEc-CCChHHHhhhHHHHHHHHHcCCCcEEEEEe--------------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYA-SWCPFSRNFRPSFSVLSSLYSSIPHFAIEE-------------- 120 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya-~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~-------------- 120 (316)
+..+...+|+.+++.+. .+++++|.||+ +||++|....|.++++.++|.++..+.+..
T Consensus 24 ~f~l~~~~G~~v~l~~~-------~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~ 96 (163)
T 1psq_A 24 DFSLTTTDLSKKSLADF-------DGKKKVLSVVPSIDTGICSTQTRRFNEELAGLDNTVVLTVSMDLPFAQKRWCGAEG 96 (163)
T ss_dssp CCEEECTTSCEEEGGGG-------TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTCTTEEEEEEESSCHHHHHHHHHHHT
T ss_pred CEEEEcCCCcEeeHHHh-------CCCEEEEEEECCCCCCccHHHHHHHHHHHHHcCCcEEEEEECCCHHHHHHHHHhcC
Confidence 34445556788777776 67899999995 999999999999999998885444443321
Q ss_pred -------CC-CChhhHhhcCCC----cc--ceEEEE--eCceeEEEeCC-----CCHHHHHHHHHH
Q 021221 121 -------SA-IRPSILSKYGVH----GF--PTLFLL--NSSMRVRYHGS-----RTLDSLVAFYSD 165 (316)
Q Consensus 121 -------~~-~~~~l~~~~~I~----~~--Pti~l~--~g~~~~~~~G~-----~~~~~l~~fi~~ 165 (316)
.| ....+++.||+. ++ |+++++ +|+.+..+.|. .+.+++.+.|++
T Consensus 97 ~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 97 LDNAIMLSDYFDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp CTTSEEEECTTTCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred CCCcEEecCCchhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 12 234677888887 43 999999 68888888763 244777777764
No 211
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.93 E-value=5.5e-09 Score=88.08 Aligned_cols=106 Identities=8% Similarity=0.057 Sum_probs=78.5
Q ss_pred CCcceEEe-C--CcccHHHHHhHHhccCCCeEEEEEEc-CCChHHHhhhHHHHHHHHHcC--CCcEEEEEeC--------
Q 021221 56 QDIVGVIE-G--DEVSLQMALNMVHKNSHEYVAVLFYA-SWCPFSRNFRPSFSVLSSLYS--SIPHFAIEES-------- 121 (316)
Q Consensus 56 ~~~v~~l~-~--~~~~~~~~~~~i~~~~~~~vlV~Fya-~WC~~Ck~~~p~~~~la~~~~--~~~~v~~~~~-------- 121 (316)
+..+..++ | +.+++.++ .+++++|.||+ +||++|+...|.++++.++|. ++..+.+...
T Consensus 9 ~f~l~~~~~G~~~~v~l~~~-------~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~ 81 (186)
T 1n8j_A 9 PFKNQAFKNGEFIEVTEKDT-------EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAW 81 (186)
T ss_dssp CCEEEEEETTEEEEEEHHHH-------TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHH
T ss_pred CcEeecccCCcceEEEHHHH-------CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHH
Confidence 44455664 7 78888887 57899999995 999999999999999998875 3444444211
Q ss_pred ----------------CCChhhHhhcCCC------ccceEEEE--eCceeEEEeCCC----CHHHHHHHHHHhhC
Q 021221 122 ----------------AIRPSILSKYGVH------GFPTLFLL--NSSMRVRYHGSR----TLDSLVAFYSDVTA 168 (316)
Q Consensus 122 ----------------~~~~~l~~~~~I~------~~Pti~l~--~g~~~~~~~G~~----~~~~l~~fi~~~~~ 168 (316)
|....+++.|||. ..|+++++ +|+.+..+.|.. +.+++.+.|++...
T Consensus 82 ~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~~ 156 (186)
T 1n8j_A 82 HSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQY 156 (186)
T ss_dssp HHHCTTGGGCCSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred HHHcCcccCCceeEEECCchHHHHHhCCccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 1123567788887 37999999 688888887753 58889888887653
No 212
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.92 E-value=1.3e-09 Score=93.88 Aligned_cols=104 Identities=12% Similarity=0.060 Sum_probs=75.9
Q ss_pred CcceEEe-CCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeC-------C---C
Q 021221 57 DIVGVIE-GDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEES-------A---I 123 (316)
Q Consensus 57 ~~v~~l~-~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~-------~---~ 123 (316)
..+..++ |+.+++.++ .++++||.|||+|||+| ...|.++++.++|.+ +..+++.-. + +
T Consensus 20 F~l~d~~~G~~v~Ls~~-------kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~~ 91 (207)
T 2r37_A 20 YGALTIDGEEYIPFKQY-------AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSE 91 (207)
T ss_dssp CEEEBTTSSCEEEGGGG-------TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHHH
T ss_pred eEeeeCCCCCEEcHHHh-------CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHHH
Confidence 3445566 788888777 78999999999999999 688999999999864 555555310 1 0
Q ss_pred ChhhHh------hcCCC-------------------------------------------------ccceEEEE--eCce
Q 021221 124 RPSILS------KYGVH-------------------------------------------------GFPTLFLL--NSSM 146 (316)
Q Consensus 124 ~~~l~~------~~~I~-------------------------------------------------~~Pti~l~--~g~~ 146 (316)
..+.++ +|++. ..||.+++ +|+.
T Consensus 92 i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i 171 (207)
T 2r37_A 92 ILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIP 171 (207)
T ss_dssp HHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCE
T ss_pred HHHHHHhcchhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcE
Confidence 122334 44331 11688888 7888
Q ss_pred eEEEeCCCCHHHHHHHHHHhhC
Q 021221 147 RVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 147 ~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
+.+|.|..+.++|.+.|++.+.
T Consensus 172 ~~~~~g~~~~~~l~~~I~~ll~ 193 (207)
T 2r37_A 172 IMRWHHRTTVSNVKMDILSYMR 193 (207)
T ss_dssp EEEECTTSCHHHHHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHHHh
Confidence 8999998899999999988764
No 213
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.90 E-value=5.3e-09 Score=90.86 Aligned_cols=106 Identities=16% Similarity=0.258 Sum_probs=77.6
Q ss_pred CCcceEE--eC--CcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcC--CCcEEEEEeC-------
Q 021221 56 QDIVGVI--EG--DEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEES------- 121 (316)
Q Consensus 56 ~~~v~~l--~~--~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~--~~~~v~~~~~------- 121 (316)
+..+..+ +| +.+++.++ ..+++++|.|| ++||++|+...|.+.++.++|. ++.++++...
T Consensus 33 ~F~l~~~~~~G~~~~v~L~d~------~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~ 106 (221)
T 2c0d_A 33 NFTAQGLNKNNEIINVDLSSF------IGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLA 106 (221)
T ss_dssp CCEEEEECTTSCEEEEEGGGG------TTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHH
T ss_pred CeEEeccccCCCccEEeHHHH------cCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHH
Confidence 4455556 67 67666554 15789999999 9999999999999999998884 4444444211
Q ss_pred --------------------CCChhhHhhcCC-----CccceEEEE--eCceeEEEeCC----CCHHHHHHHHHHhh
Q 021221 122 --------------------AIRPSILSKYGV-----HGFPTLFLL--NSSMRVRYHGS----RTLDSLVAFYSDVT 167 (316)
Q Consensus 122 --------------------~~~~~l~~~~~I-----~~~Pti~l~--~g~~~~~~~G~----~~~~~l~~fi~~~~ 167 (316)
|....+++.||| ..+|+++++ +|+.+..+.|. .+.+++.+.|++..
T Consensus 107 ~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 107 WKNMPIEKGGIGNVEFTLVSDINKDISKNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHHhhhhcCccCCceEEEECCchHHHHHcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 112357788998 478999999 67777777663 46788988888764
No 214
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.90 E-value=3.1e-09 Score=88.09 Aligned_cols=102 Identities=13% Similarity=0.096 Sum_probs=73.1
Q ss_pred CcceEEeCCcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcCCCcEEEEEe---------------
Q 021221 57 DIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSSIPHFAIEE--------------- 120 (316)
Q Consensus 57 ~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~--------------- 120 (316)
..+...+|+.+++.+. .+++++|.|| ++||++|+...|.++++.++|.++..+.+..
T Consensus 30 f~l~~~~G~~~~l~~~-------~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~ 102 (171)
T 2yzh_A 30 AVVVTKDLQEKIVGGA-------KDVVQVIITVPSLDTPVCETETKKFNEIMAGMEGVDVTVVSMDLPFAQKRFCESFNI 102 (171)
T ss_dssp EEEEETTSCEEEESSC-------CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTCTTEEEEEEESSCHHHHHHHHHHTTC
T ss_pred eEEECCCCCEeeHHHh-------CCCeEEEEEECCCCCCchHHHHHHHHHHHHHcCCceEEEEeCCCHHHHHHHHHHcCC
Confidence 3344556777776665 5789999999 8999999999999999988875444333321
Q ss_pred ------CC-CChhhHhhcCCCc---------cceEEEE--eCceeEEEeC-----CCCHHHHHHHHHHh
Q 021221 121 ------SA-IRPSILSKYGVHG---------FPTLFLL--NSSMRVRYHG-----SRTLDSLVAFYSDV 166 (316)
Q Consensus 121 ------~~-~~~~l~~~~~I~~---------~Pti~l~--~g~~~~~~~G-----~~~~~~l~~fi~~~ 166 (316)
.| ....+ +.||+.. .|+++++ +|+.+..+.| ..+.+++.+.|++.
T Consensus 103 ~~~~~l~D~~~~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 103 QNVTVASDFRYRDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp CSSEEEECTTTCGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred CCeEEeecCccCcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 12 23456 8888862 6999999 6777777764 33568888888764
No 215
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.90 E-value=6e-10 Score=92.21 Aligned_cols=108 Identities=12% Similarity=0.180 Sum_probs=78.9
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeC-----------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEES----------- 121 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~----------- 121 (316)
+..+...+|+.+++.+. ..+++++++.|| ++||++|....|.++++.++|.+ +..+++...
T Consensus 13 dF~l~~~~G~~v~Lsd~-----~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~ 87 (164)
T 4gqc_A 13 DFTLPNQDFEPVNLYEV-----LKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDE 87 (164)
T ss_dssp CCEEEBTTSCEEEHHHH-----HHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHH
T ss_pred CcEeECCCCCEEEHHHH-----hcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHh
Confidence 45566678888888887 346889999998 99999999999999988888764 444444311
Q ss_pred ---------CCChhhHhhcCCC----------ccceEEEE--eCceeEEEeC-----CCCHHHHHHHHHHhhC
Q 021221 122 ---------AIRPSILSKYGVH----------GFPTLFLL--NSSMRVRYHG-----SRTLDSLVAFYSDVTA 168 (316)
Q Consensus 122 ---------~~~~~l~~~~~I~----------~~Pti~l~--~g~~~~~~~G-----~~~~~~l~~fi~~~~~ 168 (316)
|.+.++++.|||. ..|+++++ +|+.+..+.+ ..+.+++.+.+++..+
T Consensus 88 ~~~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~~ 160 (164)
T 4gqc_A 88 NRLAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIAG 160 (164)
T ss_dssp TTCCSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHHH
T ss_pred cCcccceeecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHhc
Confidence 2234678889884 36888888 5776666654 2367888888887765
No 216
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.89 E-value=3.2e-09 Score=87.58 Aligned_cols=102 Identities=15% Similarity=0.043 Sum_probs=74.7
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcCCCcEEEEEeC-------------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSSIPHFAIEES------------- 121 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~------------- 121 (316)
+..+...+|+.+++.++ .+++++|.|| +.||++|....|.++++.++ .++..+++...
T Consensus 28 ~f~l~~~~G~~~~l~~~-------~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~~~~vv~is~d~~~~~~~~~~~~~ 99 (166)
T 3p7x_A 28 DFTVLDNDLNQVTLADY-------AGKKKLISVVPSIDTGVCDQQTRKFNSDASK-EEGIVLTISADLPFAQKRWCASAG 99 (166)
T ss_dssp CCEEECTTSCEEEGGGG-------TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-TTSEEEEEESSCHHHHHHHHHHHT
T ss_pred CeEEEcCCCCEEeHHHh-------CCCcEEEEEECCCCCCccHHHHHHHHHHhhc-CCCEEEEEECCCHHHHHHHHHHcC
Confidence 45556667888887776 6789999999 78999999999999999877 65555554311
Q ss_pred --------CC-ChhhHhhcCCCc------cceEEEE--eCceeEEEeC-----CCCHHHHHHHHHH
Q 021221 122 --------AI-RPSILSKYGVHG------FPTLFLL--NSSMRVRYHG-----SRTLDSLVAFYSD 165 (316)
Q Consensus 122 --------~~-~~~l~~~~~I~~------~Pti~l~--~g~~~~~~~G-----~~~~~~l~~fi~~ 165 (316)
|. ..++++.||+.. .|+++++ +|+.+..+.+ ..+.+++.+.|++
T Consensus 100 ~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 100 LDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp CSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred CCceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 12 346778888885 8999999 6777766543 2356777777654
No 217
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.89 E-value=7.6e-09 Score=89.11 Aligned_cols=97 Identities=16% Similarity=0.227 Sum_probs=73.2
Q ss_pred CCcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcC--CCcEEEEEeC-------------------
Q 021221 64 GDEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEES------------------- 121 (316)
Q Consensus 64 ~~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~--~~~~v~~~~~------------------- 121 (316)
|+.+++.++ .+++++|.|| ++||++|....|.+.++.++|. ++..+++...
T Consensus 38 g~~v~l~d~-------~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~ 110 (211)
T 2pn8_A 38 FKELKLTDY-------RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLG 110 (211)
T ss_dssp EEEEEGGGG-------TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCC
T ss_pred CcEEEHHHh-------CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCcc
Confidence 467777666 6789999999 9999999999999999999884 3444444210
Q ss_pred --------CCChhhHhhcCCC------ccceEEEE--eCceeEEEeCC----CCHHHHHHHHHHhh
Q 021221 122 --------AIRPSILSKYGVH------GFPTLFLL--NSSMRVRYHGS----RTLDSLVAFYSDVT 167 (316)
Q Consensus 122 --------~~~~~l~~~~~I~------~~Pti~l~--~g~~~~~~~G~----~~~~~l~~fi~~~~ 167 (316)
|....+++.|||. .+|+++++ +|+.+..+.|. ++.+++.+.|+...
T Consensus 111 ~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 111 PIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp SCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CCceEEEECCchHHHHHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 1123577889985 69999999 67777777664 46788888888765
No 218
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.88 E-value=2.1e-09 Score=92.73 Aligned_cols=82 Identities=13% Similarity=0.229 Sum_probs=61.8
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEE---------------------------------------e
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIE---------------------------------------E 120 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~---------------------------------------~ 120 (316)
+++++++.|+++|||+|+++.|.++++.+. ++....+. .
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~~ 162 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL--GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEVK 162 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT--TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSCC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC--CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChHH
Confidence 568899999999999999999999998763 22111110 0
Q ss_pred C----CCChhhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHHHHHHHh
Q 021221 121 S----AIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDV 166 (316)
Q Consensus 121 ~----~~~~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~fi~~~ 166 (316)
| +.+.++++++||+++||+++.||+ .+.|..+.++|.++|++.
T Consensus 163 ~~~~v~~~~~l~~~~gV~gTPt~vi~nG~---~~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 163 TPNIVKKHYELGIQFGVRGTPSIVTSTGE---LIGGYLKPADLLRALEET 209 (211)
T ss_dssp CSSHHHHHHHHHHHHTCCSSCEEECTTSC---CCCSCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcCCCcCCEEEEeCCE---EecCCCCHHHHHHHHHhc
Confidence 1 123467889999999999876775 567888999999999763
No 219
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.87 E-value=4.4e-09 Score=87.33 Aligned_cols=105 Identities=9% Similarity=-0.037 Sum_probs=77.5
Q ss_pred cceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCCh-HHHhhhHHHHHHHHHcC----CCcEEEEEeC-C---------
Q 021221 58 IVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCP-FSRNFRPSFSVLSSLYS----SIPHFAIEES-A--------- 122 (316)
Q Consensus 58 ~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~-~Ck~~~p~~~~la~~~~----~~~~v~~~~~-~--------- 122 (316)
.+...+|+.+++.++ .+++++|.||++||+ .|....|.++++.++|. ++..+.+.-. .
T Consensus 12 ~l~d~~G~~v~l~~~-------~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~ 84 (170)
T 3me7_A 12 TLVDSYGNEFQLKNL-------KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRF 84 (170)
T ss_dssp EEEETTCCEEEGGGG-------TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHH
T ss_pred EEEcCCcCEEchHHh-------CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHH
Confidence 345567888887776 589999999999997 69999999999999984 2444443211 0
Q ss_pred --------------------CChhhHhhcCC---------CccceEEEE--eCceeEEEeCC-CCHHHHHHHHHHhhCC
Q 021221 123 --------------------IRPSILSKYGV---------HGFPTLFLL--NSSMRVRYHGS-RTLDSLVAFYSDVTAS 169 (316)
Q Consensus 123 --------------------~~~~l~~~~~I---------~~~Pti~l~--~g~~~~~~~G~-~~~~~l~~fi~~~~~~ 169 (316)
....+++.||+ ...|+++++ +|+.+..|.|. .+.++|.+.|++..+.
T Consensus 85 ~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~~ 163 (170)
T 3me7_A 85 QKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARGE 163 (170)
T ss_dssp HHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTTC
T ss_pred HHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhcc
Confidence 11245666554 345888888 68877788885 6899999999998874
No 220
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.85 E-value=4.9e-09 Score=86.45 Aligned_cols=90 Identities=12% Similarity=0.038 Sum_probs=66.4
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcCCCcEEEEEe--------------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSSIPHFAIEE-------------- 120 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~-------------- 120 (316)
+..+...+|+.+++.+. .+++++|.|| ++||++|....|.++++.++|+++..+++..
T Consensus 25 ~f~l~~~~G~~v~l~~~-------~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~ 97 (165)
T 1q98_A 25 NFILVGNDLADVALNDF-------ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKLSNTIVLCISADLPFAQARFCGAEG 97 (165)
T ss_dssp CCEEECTTSCEEEGGGG-------TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHSTTEEEEEEESSCHHHHTTCTTTTT
T ss_pred CeEEECCCCCEEehHHh-------CCCeEEEEEECCCCCCccHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHcC
Confidence 34445556788777776 6789999999 8999999999999999999885544443321
Q ss_pred -------CCC-ChhhHhhcCCCc---------cceEEEE--eCceeEEEeC
Q 021221 121 -------SAI-RPSILSKYGVHG---------FPTLFLL--NSSMRVRYHG 152 (316)
Q Consensus 121 -------~~~-~~~l~~~~~I~~---------~Pti~l~--~g~~~~~~~G 152 (316)
.|. ...+++.||+.. .|+++++ +|+.+..+.|
T Consensus 98 ~~~~~~l~D~~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~ 148 (165)
T 1q98_A 98 IENAKTVSTFRNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQLV 148 (165)
T ss_dssp CTTEEEEECTTCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEEC
T ss_pred CCceEEeeccccchHHHHhCceecccccCCccceeEEEEcCCCEEEEEEeC
Confidence 111 356778888864 4999999 6788878764
No 221
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.83 E-value=7.6e-09 Score=86.62 Aligned_cols=104 Identities=10% Similarity=0.154 Sum_probs=75.3
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeC-----------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEES----------- 121 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~----------- 121 (316)
+..+...+|+.+++.++ .+++++|.|| ++||++|....|.++++.++|.+ +..+.+...
T Consensus 33 ~f~l~~~~G~~v~l~d~-------~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~ 105 (179)
T 3ixr_A 33 NHPLMLSGSTCKTLSDY-------TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAK 105 (179)
T ss_dssp HCCEEEGGGEEECGGGG-------TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHH
T ss_pred CeeEECCCCCEEeHHHH-------CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 44556678888888776 6789999998 99999999999999999998864 334443211
Q ss_pred ---------CCChhhHhhcCCCc------------cceEEEE--eCceeEEEeCCC---CHHHHHHHHHHh
Q 021221 122 ---------AIRPSILSKYGVHG------------FPTLFLL--NSSMRVRYHGSR---TLDSLVAFYSDV 166 (316)
Q Consensus 122 ---------~~~~~l~~~~~I~~------------~Pti~l~--~g~~~~~~~G~~---~~~~l~~fi~~~ 166 (316)
|...++++.||+.. .|+++++ +|+.+..+.+.. +.+++.+.|++.
T Consensus 106 ~~~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 106 QGFTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp HTCCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred cCCceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 12346788888864 5889999 677777776533 346666666654
No 222
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.80 E-value=1.2e-08 Score=86.12 Aligned_cols=88 Identities=17% Similarity=0.243 Sum_probs=68.0
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCC------------------------------------C
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA------------------------------------I 123 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~------------------------------------~ 123 (316)
+++++|+.||.+|||+|+++.|.++++.+.+++.+.+...... .
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~~~~~~~~aa~a~~aa~~~g~~~~~~~~lf~~~~~~~~ 103 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPALFGGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHKEHK 103 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECCCSTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTSCC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEehhhccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCc
Confidence 5688999999999999999999999999999873333211110 0
Q ss_pred -------------------------------------ChhhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHHHHHHHh
Q 021221 124 -------------------------------------RPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDV 166 (316)
Q Consensus 124 -------------------------------------~~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~fi~~~ 166 (316)
+..++.++||.|+||+++ ||+......|..+.+.|.+.|+..
T Consensus 104 ~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~v-ng~~~~~~~G~~~~e~l~~~i~~l 182 (192)
T 3h93_A 104 KLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAYQVTGVPTMVV-NGKYRFDIGSAGGPEETLKLADYL 182 (192)
T ss_dssp CCCSHHHHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHTCCSSSEEEE-TTTEEEEHHHHTSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHHHHHhhCHHHHHHHHHHHHHHHHhCCCCCCeEEE-CCEEEecccccCCHHHHHHHHHHH
Confidence 013467789999999976 888777667888999999998877
Q ss_pred hC
Q 021221 167 TA 168 (316)
Q Consensus 167 ~~ 168 (316)
+.
T Consensus 183 ~~ 184 (192)
T 3h93_A 183 IE 184 (192)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 223
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.78 E-value=3.7e-09 Score=80.36 Aligned_cols=78 Identities=14% Similarity=0.187 Sum_probs=51.9
Q ss_pred EEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCC-------hhhHhhcCCCccceEEEEeCceeEEEeC---C
Q 021221 84 VAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIR-------PSILSKYGVHGFPTLFLLNSSMRVRYHG---S 153 (316)
Q Consensus 84 vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~-------~~l~~~~~I~~~Pti~l~~g~~~~~~~G---~ 153 (316)
.++.|+++|||+|+++.+.++++...+++ +...+.+.+ ..+.+.+|+.++|++ +++|+.+..+.. .
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~~---~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i-~~~g~~i~g~~~~~~~ 88 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEGL---LEFVDITATSDTNEIQDYLQQLTGARTVPRV-FIGKECIGGCTDLESM 88 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTTS---EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE-EETTEEEESHHHHHHH
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCCc---cEEEEccCCCCHHHHHHHHHHHhCCCCcCeE-EECCEEEeccHHHHHH
Confidence 36779999999999999999988766554 333344433 357889999999997 347765433221 1
Q ss_pred CCHHHHHHHHHH
Q 021221 154 RTLDSLVAFYSD 165 (316)
Q Consensus 154 ~~~~~l~~fi~~ 165 (316)
....+|.+++.+
T Consensus 89 ~~~g~L~~~l~~ 100 (105)
T 1kte_A 89 HKRGELLTRLQQ 100 (105)
T ss_dssp HHHTHHHHHHHH
T ss_pred HHCCcHHHHHHH
Confidence 123455555543
No 224
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.77 E-value=2e-08 Score=85.73 Aligned_cols=90 Identities=10% Similarity=0.058 Sum_probs=66.9
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcCCCcEEEEEeC-------------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSSIPHFAIEES------------- 121 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~------------- 121 (316)
+..+...+|+.+++.++ .+++++|.|| +.||++|....|.++++.++|.++..+++...
T Consensus 60 df~l~d~~G~~v~L~d~-------~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~~~v~vv~Is~D~~~~~~~~~~~~~ 132 (200)
T 3zrd_A 60 DFTLVAKDLSDVALSSF-------AGKRKVLNIFPSIDTGVCAASVRKFNQLAGELENTVVLCISSDLPFAQSRFCGAEG 132 (200)
T ss_dssp CCEEECTTSCEEEGGGG-------TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTSTTEEEEEEESSCHHHHTTCTTTTT
T ss_pred CeEEECCCCCEEcHHHh-------CCCcEEEEEECCCCCchhHHHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHcC
Confidence 44556667888887776 6789999999 78999999999999999999865544444211
Q ss_pred --------CC-ChhhHhhcCCC---------ccceEEEE--eCceeEEEeC
Q 021221 122 --------AI-RPSILSKYGVH---------GFPTLFLL--NSSMRVRYHG 152 (316)
Q Consensus 122 --------~~-~~~l~~~~~I~---------~~Pti~l~--~g~~~~~~~G 152 (316)
|. ..++++.|||. ..|+++++ +|+.+..+.+
T Consensus 133 ~~~f~~l~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~~~ 183 (200)
T 3zrd_A 133 LSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSELV 183 (200)
T ss_dssp CTTEEEEETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEEC
T ss_pred CCCceEEecCchHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEEec
Confidence 12 34677788886 26999999 6777766654
No 225
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.76 E-value=5.8e-09 Score=75.28 Aligned_cols=71 Identities=8% Similarity=0.111 Sum_probs=49.3
Q ss_pred EEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHh---hcCCCccceEEEEeCceeEEEeCCCCHHHHHH
Q 021221 85 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILS---KYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVA 161 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~---~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~ 161 (316)
++.|+++||++|+++.+.+++. ++. +...|.+.++++.+ ++|+.++|+++ ++|+. .+..+.++|.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-----~i~-~~~vdi~~~~~~~~~~~~~g~~~vP~~~-~~g~~----~~g~~~~~l~~ 71 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-----GFD-FEMINVDRVPEAAEALRAQGFRQLPVVI-AGDLS----WSGFRPDMINR 71 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TCC-CEEEETTTCHHHHHHHHHTTCCSSCEEE-ETTEE----EESCCHHHHGG
T ss_pred EEEEcCCCChhHHHHHHHHHHC-----CCC-eEEEECCCCHHHHHHHHHhCCCccCEEE-ECCEE----EecCCHHHHHH
Confidence 6789999999999999999874 222 33345555555443 58999999983 46653 33456777777
Q ss_pred HHHHh
Q 021221 162 FYSDV 166 (316)
Q Consensus 162 fi~~~ 166 (316)
+++++
T Consensus 72 ~l~~~ 76 (81)
T 1h75_A 72 LHPAP 76 (81)
T ss_dssp GSCCC
T ss_pred HHhcc
Confidence 66543
No 226
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.75 E-value=4.7e-08 Score=85.88 Aligned_cols=97 Identities=18% Similarity=0.247 Sum_probs=72.7
Q ss_pred CCcccHHHHHhHHhccCCCeEEEEEEc-CCChHHHhhhHHHHHHHHHcCC--CcEEEEEeC-------------------
Q 021221 64 GDEVSLQMALNMVHKNSHEYVAVLFYA-SWCPFSRNFRPSFSVLSSLYSS--IPHFAIEES------------------- 121 (316)
Q Consensus 64 ~~~~~~~~~~~~i~~~~~~~vlV~Fya-~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~------------------- 121 (316)
|+.+++.++ .+++++|.||+ +||++|....|.+.++.++|++ +..+++...
T Consensus 67 G~~vsLsd~-------~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~ 139 (240)
T 3qpm_A 67 FKELKLSDY-------RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLG 139 (240)
T ss_dssp EEEEEGGGG-------TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCC
T ss_pred CcEEEHHHh-------CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCC
Confidence 347777776 67899999999 9999999999999999999853 444444211
Q ss_pred --------CCChhhHhhcCCC------ccceEEEE--eCceeEEEeC----CCCHHHHHHHHHHhh
Q 021221 122 --------AIRPSILSKYGVH------GFPTLFLL--NSSMRVRYHG----SRTLDSLVAFYSDVT 167 (316)
Q Consensus 122 --------~~~~~l~~~~~I~------~~Pti~l~--~g~~~~~~~G----~~~~~~l~~fi~~~~ 167 (316)
|...++++.|||. .+|+++++ +|+.+..+.+ .++.+++.+.|+...
T Consensus 140 ~~~fp~l~D~~~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~lq 205 (240)
T 3qpm_A 140 PMKIPLLSDLTHQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAFQ 205 (240)
T ss_dssp SCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CCceeEEeCchHHHHHHhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 1124678889998 68999999 6777776665 346788888887653
No 227
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.72 E-value=4.4e-08 Score=82.83 Aligned_cols=34 Identities=15% Similarity=0.225 Sum_probs=31.5
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCC
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI 113 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~ 113 (316)
++++++|.||++|||+|+++.|.++++.+.+++.
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~ 57 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQD 57 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTT
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCC
Confidence 5789999999999999999999999999999863
No 228
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.71 E-value=4.9e-08 Score=68.99 Aligned_cols=69 Identities=6% Similarity=0.122 Sum_probs=50.2
Q ss_pred EEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHh---hcCCCccceEEEEeCceeEEEeCCCCHHHHHH
Q 021221 85 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILS---KYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVA 161 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~---~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~ 161 (316)
++.|+++||++|+++.+.++++ ++. +...|.+.++++.+ ++|+.++|++++ +|+. .+..+.++|.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-----~i~-~~~~di~~~~~~~~~~~~~~~~~vP~l~~-~g~~----~~g~~~~~l~~ 71 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-----GLA-YNTVDISLDDEARDYVMALGYVQAPVVEV-DGEH----WSGFRPERIKQ 71 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TCC-CEEEETTTCHHHHHHHHHTTCBCCCEEEE-TTEE----EESCCHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc-----CCC-cEEEECCCCHHHHHHHHHcCCCccCEEEE-CCeE----EcCCCHHHHHH
Confidence 6789999999999999999875 222 33345555555555 899999999974 6643 33457888888
Q ss_pred HHH
Q 021221 162 FYS 164 (316)
Q Consensus 162 fi~ 164 (316)
+++
T Consensus 72 ~l~ 74 (75)
T 1r7h_A 72 LQA 74 (75)
T ss_dssp HHC
T ss_pred HHh
Confidence 763
No 229
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.70 E-value=3.5e-08 Score=87.13 Aligned_cols=103 Identities=13% Similarity=0.191 Sum_probs=74.5
Q ss_pred ceEEeCCcccH-HHHHhHHhccCCCe-EEEEEEcCCChHHHhhhHHHHHHHHHcC--CCcEEEEEeC-------------
Q 021221 59 VGVIEGDEVSL-QMALNMVHKNSHEY-VAVLFYASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEES------------- 121 (316)
Q Consensus 59 v~~l~~~~~~~-~~~~~~i~~~~~~~-vlV~Fya~WC~~Ck~~~p~~~~la~~~~--~~~~v~~~~~------------- 121 (316)
+...+| ++++ .+. ...++. +|+.||++||+.|....|.+.++.++|. ++..+++.-.
T Consensus 16 l~~~~G-~v~l~~d~-----l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~ 89 (249)
T 3a2v_A 16 VTTDHG-VIKLPDHY-----VSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIE 89 (249)
T ss_dssp EEETTE-EEEETHHH-----HTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHH
T ss_pred EEcCCC-CEecHHHH-----hhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHH
Confidence 344445 5666 665 224564 5668899999999999999999999886 3444444311
Q ss_pred -------------CCChhhHhhcCCC-------ccceEEEE--eCceeEEEeCC----CCHHHHHHHHHHhh
Q 021221 122 -------------AIRPSILSKYGVH-------GFPTLFLL--NSSMRVRYHGS----RTLDSLVAFYSDVT 167 (316)
Q Consensus 122 -------------~~~~~l~~~~~I~-------~~Pti~l~--~g~~~~~~~G~----~~~~~l~~fi~~~~ 167 (316)
|....+++.|||. ++|+++++ +|+.+..+.|. ++.++|...|+...
T Consensus 90 ~~~~~~i~fPil~D~~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 90 RHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp HHTCCCCCSCEEECTTSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HhcCCCCceeEEECCchHHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHH
Confidence 2245688999997 89999999 67777766664 57899999888764
No 230
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.70 E-value=7.4e-08 Score=79.11 Aligned_cols=85 Identities=13% Similarity=0.173 Sum_probs=62.7
Q ss_pred EeC--CcccHHH-HHhHHhccCCCeEEEEEE-cCCChHHH-hhhHHHHHHHHHcC--CCc-EEEEEeC------------
Q 021221 62 IEG--DEVSLQM-ALNMVHKNSHEYVAVLFY-ASWCPFSR-NFRPSFSVLSSLYS--SIP-HFAIEES------------ 121 (316)
Q Consensus 62 l~~--~~~~~~~-~~~~i~~~~~~~vlV~Fy-a~WC~~Ck-~~~p~~~~la~~~~--~~~-~v~~~~~------------ 121 (316)
.+| +.+++.+ . .+++++|.|| ++||++|. ...|.++++.++|. ++. .+++...
T Consensus 20 ~~G~~~~~~l~~~~-------~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~ 92 (162)
T 1tp9_A 20 EQDQLQEVSVHSLV-------AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSY 92 (162)
T ss_dssp TTSCEEEEESHHHH-------TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTC
T ss_pred CCCCceeEeHHHHh-------CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhc
Confidence 356 7777877 5 6789999999 89999999 89999999998874 455 5555311
Q ss_pred ----------CCChhhHhhcCCC------c-----cceEEEE-eCceeEEEeCC
Q 021221 122 ----------AIRPSILSKYGVH------G-----FPTLFLL-NSSMRVRYHGS 153 (316)
Q Consensus 122 ----------~~~~~l~~~~~I~------~-----~Pti~l~-~g~~~~~~~G~ 153 (316)
|.+.++++.||+. + .|+++++ +|+.+..+.|.
T Consensus 93 ~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vid~G~i~~~~~~~ 146 (162)
T 1tp9_A 93 PENKHVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVDDLKVKAANIEG 146 (162)
T ss_dssp TTCSSEEEEECTTSHHHHHTTCEEEETTTTSEEEECCEEEEEETTEEEEEEECS
T ss_pred CCCCCeEEEECCCchHHHHcCcccccccCCCCccceeEEEEEECCEEEEEEeeC
Confidence 1234677888886 2 7999888 66666666654
No 231
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.70 E-value=1.2e-07 Score=79.99 Aligned_cols=91 Identities=9% Similarity=0.077 Sum_probs=63.9
Q ss_pred CCcceEE--eC-CcccHHH-HHhHHhccCCCeE-EEEEEcCCChHHHh-hhHHHHHHHHHcC--CCc-EEEEEeCC----
Q 021221 56 QDIVGVI--EG-DEVSLQM-ALNMVHKNSHEYV-AVLFYASWCPFSRN-FRPSFSVLSSLYS--SIP-HFAIEESA---- 122 (316)
Q Consensus 56 ~~~v~~l--~~-~~~~~~~-~~~~i~~~~~~~v-lV~Fya~WC~~Ck~-~~p~~~~la~~~~--~~~-~v~~~~~~---- 122 (316)
+..+..+ +| +.+++.+ . .++++ ++.||++|||+|+. ..|.|++++++|+ ++. .+++...+
T Consensus 34 df~l~~~~~~G~~~v~L~d~~-------~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~ 106 (184)
T 3uma_A 34 NATFKEKTADGPVEVTTELLF-------KGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVM 106 (184)
T ss_dssp CCEEEEEETTEEEEEEHHHHH-------TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHH
T ss_pred CcEeecccCCCceEEeHHHHh-------CCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHH
Confidence 4556666 67 8888888 4 45655 45556999999999 7999999999885 455 55553211
Q ss_pred ------------------CChhhHhhcCCC-----------ccceEEEE-eCceeEEEeCC
Q 021221 123 ------------------IRPSILSKYGVH-----------GFPTLFLL-NSSMRVRYHGS 153 (316)
Q Consensus 123 ------------------~~~~l~~~~~I~-----------~~Pti~l~-~g~~~~~~~G~ 153 (316)
.+.++++.|||. ..|+++++ +|+.+..+.|.
T Consensus 107 ~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiIddG~I~~~~~~~ 167 (184)
T 3uma_A 107 GAWATHSGGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVEDGVVKALNIEE 167 (184)
T ss_dssp HHHHHHHTCTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEETTEEEEEEECS
T ss_pred HHHHHHhCCCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEECCCEEEEEEEeC
Confidence 123577888885 35778888 77777777654
No 232
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.67 E-value=1.1e-07 Score=78.83 Aligned_cols=91 Identities=7% Similarity=-0.014 Sum_probs=63.1
Q ss_pred Ccce-EEeCCcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHh-hhHHHHHHHHHcC--CC-cEEEEEeC---------
Q 021221 57 DIVG-VIEGDEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRN-FRPSFSVLSSLYS--SI-PHFAIEES--------- 121 (316)
Q Consensus 57 ~~v~-~l~~~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~-~~p~~~~la~~~~--~~-~~v~~~~~--------- 121 (316)
..+. ..+|+.+++.++ -.+++++|.|| ++||++|+. ..|.|+++.++|. ++ ..+++...
T Consensus 12 f~l~~~~~G~~v~L~d~------~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~ 85 (167)
T 2wfc_A 12 VTVFGATPNDKVNMAEL------FAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWG 85 (167)
T ss_dssp CEEESSSTTCEEEHHHH------TTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHH
T ss_pred cEeecCCCCcEEeHHHH------hCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHH
Confidence 3344 456778888776 25678888887 999999999 9999999988774 45 55555311
Q ss_pred -------------CCChhhHhhcCCCcc-----------ceEEEE-eCceeEEEeCC
Q 021221 122 -------------AIRPSILSKYGVHGF-----------PTLFLL-NSSMRVRYHGS 153 (316)
Q Consensus 122 -------------~~~~~l~~~~~I~~~-----------Pti~l~-~g~~~~~~~G~ 153 (316)
|...++++.||+... |+++++ +|+.+..+.+.
T Consensus 86 ~~~~~~~~fp~l~D~~~~~~~~~gv~~~~~~~~g~~~~~p~t~lI~~G~I~~~~~~~ 142 (167)
T 2wfc_A 86 KAHGADDKVQMLADPGGAFTKAVDMELDLSAVLGNVRSKRYSLVIEDGVVTKVNVEP 142 (167)
T ss_dssp HHTTCTTTSEEEECTTSHHHHHTTCEECCHHHHSSCEECCEEEEEETTEEEEEEECT
T ss_pred HhcCCCcceEEEECCCCcHHHHcCCccccccccCcccceEEEEEEeCCEEEEEEecC
Confidence 112356777777653 888887 67666666654
No 233
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.67 E-value=6.1e-08 Score=85.94 Aligned_cols=98 Identities=18% Similarity=0.241 Sum_probs=72.7
Q ss_pred eCCcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeC------------------
Q 021221 63 EGDEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEES------------------ 121 (316)
Q Consensus 63 ~~~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~------------------ 121 (316)
+|+.+++.++ .+++++|.|| +.||++|....|.|.++.++|++ +..+++...
T Consensus 80 ~G~~vsLsd~-------kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~ 152 (254)
T 3tjj_A 80 EFKELKLTDY-------RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGL 152 (254)
T ss_dssp EEEEEEGGGG-------TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSC
T ss_pred CCcEEeHHHH-------CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCC
Confidence 3567777776 6789999999 99999999999999999998853 444444211
Q ss_pred ---------CCChhhHhhcCCC------ccceEEEE--eCceeEEEeC----CCCHHHHHHHHHHhh
Q 021221 122 ---------AIRPSILSKYGVH------GFPTLFLL--NSSMRVRYHG----SRTLDSLVAFYSDVT 167 (316)
Q Consensus 122 ---------~~~~~l~~~~~I~------~~Pti~l~--~g~~~~~~~G----~~~~~~l~~fi~~~~ 167 (316)
|...++++.|||. .+|+++++ +|+.+..+.+ .++.+++.+.|+...
T Consensus 153 ~~~~fp~l~D~~~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~alq 219 (254)
T 3tjj_A 153 GPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQ 219 (254)
T ss_dssp CSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred cccccceeeCcHHHHHHHcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHhhc
Confidence 1134678888986 58999999 6777777665 456788888877543
No 234
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.67 E-value=3.7e-08 Score=86.58 Aligned_cols=86 Identities=9% Similarity=0.236 Sum_probs=62.2
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeC--------------------------------------
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEES-------------------------------------- 121 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~-------------------------------------- 121 (316)
+.+.+++.|+.+|||+|+++.|.++++.+. .++ .+.....
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~-g~v-~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~ 173 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS-GKV-QLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNV 173 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT-TSE-EEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC-CcE-EEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCc
Confidence 456789999999999999999999988765 222 2211100
Q ss_pred ------------CCChhhHhhcCCCccceEEEEeC-ceeEEEeCCCCHHHHHHHHHHhh
Q 021221 122 ------------AIRPSILSKYGVHGFPTLFLLNS-SMRVRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 122 ------------~~~~~l~~~~~I~~~Pti~l~~g-~~~~~~~G~~~~~~l~~fi~~~~ 167 (316)
+.+..+++++||+++||+++.++ +......|..+.++|.++|++..
T Consensus 174 ~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 174 PANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEEEEEESSCCHHHHHHHTTC--
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCEEEecCCCCHHHHHHHHHHHH
Confidence 11235678999999999999852 23457889999999999887654
No 235
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.66 E-value=3.3e-07 Score=79.52 Aligned_cols=103 Identities=11% Similarity=0.143 Sum_probs=77.7
Q ss_pred eCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCC--CChhhHhhcCCC--ccce
Q 021221 63 EGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA--IRPSILSKYGVH--GFPT 138 (316)
Q Consensus 63 ~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~--~~~~l~~~~~I~--~~Pt 138 (316)
+.+..|+.+. .......+++.|+.+||++|+.+.+.|+++++.|++...+...|++ .++.+++.||+. .+|+
T Consensus 117 e~t~~n~~~~----~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~ 192 (227)
T 4f9z_D 117 EYNPVTVIGL----FNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGKILFILVDSGMKENGKVISFFKLKESQLPA 192 (227)
T ss_dssp ECCHHHHHHH----HHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTTCEEEEEETTSGGGHHHHHHTTCCGGGCSE
T ss_pred ecCcccHHHH----hccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCCEEEEEeCCccHhHHHHHHHcCCCcccCCE
Confidence 3333335554 3333355666788999999999999999999999987778777875 366788999998 8999
Q ss_pred EEEEe--CceeEEEe-CCCCHHHHHHHHHHhhCC
Q 021221 139 LFLLN--SSMRVRYH-GSRTLDSLVAFYSDVTAS 169 (316)
Q Consensus 139 i~l~~--g~~~~~~~-G~~~~~~l~~fi~~~~~~ 169 (316)
+++++ +.....+. |..+.++|.+|+++.+..
T Consensus 193 ~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~G 226 (227)
T 4f9z_D 193 LAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLSG 226 (227)
T ss_dssp EEEEESSSCCEEEETTCCCCHHHHHHHHHHHHTT
T ss_pred EEEEECCCCccccCCcCCCCHHHHHHHHHHHhCC
Confidence 99994 22234443 678999999999987653
No 236
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.64 E-value=6.7e-09 Score=80.51 Aligned_cols=79 Identities=19% Similarity=0.239 Sum_probs=51.6
Q ss_pred eEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCC-------hhhHhhcCCCccceEEEEeCceeEEEeC---
Q 021221 83 YVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIR-------PSILSKYGVHGFPTLFLLNSSMRVRYHG--- 152 (316)
Q Consensus 83 ~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~-------~~l~~~~~I~~~Pti~l~~g~~~~~~~G--- 152 (316)
..++.|+++|||+|+++.+.++++...++. +...+.+.+ ..+.+.+|+.++|+++ ++|+.+..+.+
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~~~~~~~~---~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~-i~g~~igg~~~~~~ 94 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNKFSFKRGA---YEIVDIKEFKPENELRDYFEQITGGKTVPRIF-FGKTSIGGYSDLLE 94 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTTSCBCTTS---EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEE-ETTEEEESHHHHHH
T ss_pred CCEEEEEeCCChhHHHHHHHHHHcCCCcCc---eEEEEccCCCChHHHHHHHHHHhCCCCcCEEE-ECCEEEeCcHHHHH
Confidence 357889999999999999999876543222 344454444 3788899999999874 47765443321
Q ss_pred CCCHHHHHHHHHH
Q 021221 153 SRTLDSLVAFYSD 165 (316)
Q Consensus 153 ~~~~~~l~~fi~~ 165 (316)
..+.++|.+++++
T Consensus 95 ~~~~~~L~~~L~~ 107 (114)
T 2hze_A 95 IDNMDALGDILSS 107 (114)
T ss_dssp HHHTTCHHHHHHH
T ss_pred HHHCChHHHHHHH
Confidence 1123345555553
No 237
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.63 E-value=9.8e-08 Score=79.62 Aligned_cols=103 Identities=10% Similarity=-0.043 Sum_probs=68.4
Q ss_pred CCcce-EEeCCcccHHHHHhHHhccCCCeEEEEEE-cCCChHHH-hhhHHHHHHHHHcCC--CcEEEEEeCC--------
Q 021221 56 QDIVG-VIEGDEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSR-NFRPSFSVLSSLYSS--IPHFAIEESA-------- 122 (316)
Q Consensus 56 ~~~v~-~l~~~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck-~~~p~~~~la~~~~~--~~~v~~~~~~-------- 122 (316)
+..+. ..+|+.+++.+. -.+++++|.|| ++||++|. ...|.|++++++|.+ +..++++..+
T Consensus 23 df~l~~~~~g~~v~L~d~------~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f 96 (173)
T 3mng_A 23 AVEVFEGEPGNKVNLAEL------FKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEW 96 (173)
T ss_dssp CCEEECSSTTCEEEHHHH------TTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHH
T ss_pred CeEeeeCCCCCEEEhHHH------hCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHH
Confidence 34444 567888888885 15676666555 99999999 599999999988853 5555422221
Q ss_pred ---------------CChhhHhhcCCC-------------ccceEEEE-eCceeEEEeCC----CCHHHHHHHHH
Q 021221 123 ---------------IRPSILSKYGVH-------------GFPTLFLL-NSSMRVRYHGS----RTLDSLVAFYS 164 (316)
Q Consensus 123 ---------------~~~~l~~~~~I~-------------~~Pti~l~-~g~~~~~~~G~----~~~~~l~~fi~ 164 (316)
.+.++++.|||. ..|+++++ +|+....+.+. ++..+..+.|+
T Consensus 97 ~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvIDdG~I~~~~v~~~~~g~~~~~~~~vl~ 171 (173)
T 3mng_A 97 GRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIIS 171 (173)
T ss_dssp HHHTTCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEETTEEEEEEECTTSSCSSTTSHHHHHH
T ss_pred HHHhCCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEECCEEEEEEEeCCCCCcchHHHHHHHH
Confidence 123677888886 35999999 66666666653 44555555444
No 238
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.62 E-value=1e-07 Score=79.10 Aligned_cols=105 Identities=10% Similarity=0.219 Sum_probs=71.0
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCCh-HHHhhhHHHHHHHHHcC----CCcEEEEE-eCC-CCh---
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCP-FSRNFRPSFSVLSSLYS----SIPHFAIE-ESA-IRP--- 125 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~-~Ck~~~p~~~~la~~~~----~~~~v~~~-~~~-~~~--- 125 (316)
+..+...+|+.+++.++ .+++++|+||++||+ .|....+.+.++.+.++ ++..+.+. |.+ ..+
T Consensus 14 dF~L~d~~G~~v~l~d~-------~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l 86 (170)
T 4hde_A 14 TFQFTNQDGKPFGTKDL-------KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENL 86 (170)
T ss_dssp CCEEECTTSCEEEHHHH-------TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHH
T ss_pred CcEEECCCCCEEeHHHh-------CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHH
Confidence 45566678999999998 789999999999997 79999999988887663 24344432 111 111
Q ss_pred -hhHhhcC------------------------------------CCccceEEEE--eCceeEEEeCC--CCHHHHHHHHH
Q 021221 126 -SILSKYG------------------------------------VHGFPTLFLL--NSSMRVRYHGS--RTLDSLVAFYS 164 (316)
Q Consensus 126 -~l~~~~~------------------------------------I~~~Pti~l~--~g~~~~~~~G~--~~~~~l~~fi~ 164 (316)
+..++|+ |...|+++++ +|+.+..|.|. .+.++|.+-|+
T Consensus 87 ~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~l~~~ik 166 (170)
T 4hde_A 87 KAFIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYEDIIRDMK 166 (170)
T ss_dssp HHHHTTTCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHHHHHHHH
T ss_pred HHHHHHcCCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHHHHHHHH
Confidence 1222222 2223678888 78888888874 35678888777
Q ss_pred Hhh
Q 021221 165 DVT 167 (316)
Q Consensus 165 ~~~ 167 (316)
+.+
T Consensus 167 ~Ll 169 (170)
T 4hde_A 167 RLA 169 (170)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 239
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.56 E-value=3.9e-07 Score=84.18 Aligned_cols=128 Identities=9% Similarity=-0.010 Sum_probs=93.8
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-e-CceeEEEeCC-CCH
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-N-SSMRVRYHGS-RTL 156 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~-g~~~~~~~G~-~~~ 156 (316)
.++.++|.|+++||.. ..+.|.++++.+.+...++... +++++++|+|. +|++++| . ++....|.|. ++.
T Consensus 141 ~~~~~vv~ff~~~~~~---~~~~~~~~A~~~~~~~~f~~~~---~~~~~~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~~ 213 (350)
T 1sji_A 141 EDQIKLIGFFKSEESE---YYKAFEEAAEHFQPYIKFFATF---DKGVAKKLSLK-MNEVDFYEPFMDEPIAIPDKPYTE 213 (350)
T ss_dssp CSSCEEEEECSCTTSH---HHHHHHHHHHHTTTTSEEEEEC---CHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCH
T ss_pred CCCcEEEEEECCCCcH---HHHHHHHHHHhhccCcEEEEEC---CHHHHHHcCCC-CCcEEEEeCCCCCceecCCCCCCH
Confidence 4567899999998754 4689999999997767777653 46799999999 9999999 3 4566789997 899
Q ss_pred HHHHHHHHHhhCCCC----CCCcccccccCccccCCCccccccCCcccCChhhhhchHHHHHHHHHHH
Q 021221 157 DSLVAFYSDVTASLD----KISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAFV 220 (316)
Q Consensus 157 ~~l~~fi~~~~~~~~----~~~~~~~~~~~~~~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~ 220 (316)
++|.+||.++.-+.. ..++..+.... .+...++.| .. +||.+|.++ .+.+..+|..|.
T Consensus 214 ~~l~~fi~~~~~p~v~elt~~~~~~~~~~~-~~~~~~l~f-~~--~~~~~~~~~--~~~~~~vA~~~~ 275 (350)
T 1sji_A 214 EELVEFVKEHQRPTLRRLRPEDMFETWEDD-LNGIHIVAF-AE--RSDPDGYEF--LEILKQVARDNT 275 (350)
T ss_dssp HHHHHHHHHHCCCSEEECCTTTHHHHHHSC-SSSEEEEEE-CC--TTSHHHHHH--HHHHHHHHHHGG
T ss_pred HHHHHHHHHcCccchhhcChhhHHHHhcCC-CCCcEEEEE-Ec--CCCccHHHH--HHHHHHHHHHhC
Confidence 999999999876542 22333332110 011122335 55 788888888 899999999885
No 240
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=98.54 E-value=4.5e-07 Score=78.75 Aligned_cols=104 Identities=8% Similarity=0.109 Sum_probs=73.9
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCC--eEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEe-----------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHE--YVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEE----------- 120 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~--~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~----------- 120 (316)
+..+...+| .+++.++ .++ .+|+.||++||++|....|.+.++.++|.+ +..+++.-
T Consensus 13 ~F~l~~~~G-~v~l~d~-------~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~ 84 (224)
T 1prx_A 13 NFEANTTVG-RIRFHDF-------LGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSK 84 (224)
T ss_dssp CCEEEETTE-EEEHHHH-------HTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHH
T ss_pred CcEEecCCC-CEEHHHH-------cCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 444555667 7888887 233 566667899999999999999999998854 33343321
Q ss_pred -------------------CCCChhhHhhcCCC------------ccceEEEE--eCceeEEEeC----CCCHHHHHHHH
Q 021221 121 -------------------SAIRPSILSKYGVH------------GFPTLFLL--NSSMRVRYHG----SRTLDSLVAFY 163 (316)
Q Consensus 121 -------------------~~~~~~l~~~~~I~------------~~Pti~l~--~g~~~~~~~G----~~~~~~l~~fi 163 (316)
.|...++++.||+. .+|+++++ +|+.+..+.| .++.+++.+.|
T Consensus 85 ~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i 164 (224)
T 1prx_A 85 DINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVV 164 (224)
T ss_dssp HHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHH
T ss_pred HHHHhhCcccccCcCcceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHH
Confidence 01234677888884 37999999 6777777765 35789999888
Q ss_pred HHhh
Q 021221 164 SDVT 167 (316)
Q Consensus 164 ~~~~ 167 (316)
+...
T Consensus 165 ~~l~ 168 (224)
T 1prx_A 165 ISLQ 168 (224)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8754
No 241
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.53 E-value=5.5e-07 Score=76.22 Aligned_cols=33 Identities=15% Similarity=0.459 Sum_probs=30.8
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCC
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS 112 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~ 112 (316)
++++++|+|+++|||+|+++.|.++++.+.+++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~ 55 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD 55 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC
Confidence 468899999999999999999999999998876
No 242
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=98.51 E-value=6.2e-07 Score=78.36 Aligned_cols=105 Identities=9% Similarity=0.139 Sum_probs=75.1
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcC--CCcEEEEEe------------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEE------------ 120 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~--~~~~v~~~~------------ 120 (316)
+..+...+| .+++.++ ..+++++|.|| ++||+.|....|.+.++.++|. ++..+++.-
T Consensus 11 dF~l~~~~G-~v~l~d~------~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~ 83 (233)
T 2v2g_A 11 NFEADSTIG-KLKFHDW------LGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSED 83 (233)
T ss_dssp CCEEEETTC-CEEHHHH------HCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHH
T ss_pred CcEEecCCC-CEEHHHH------CCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH
Confidence 445556667 7888887 23348999998 9999999999999999988875 333333321
Q ss_pred ----------------CCCChhhHhhcCCC------------ccceEEEE--eCceeEEEeC----CCCHHHHHHHHHHh
Q 021221 121 ----------------SAIRPSILSKYGVH------------GFPTLFLL--NSSMRVRYHG----SRTLDSLVAFYSDV 166 (316)
Q Consensus 121 ----------------~~~~~~l~~~~~I~------------~~Pti~l~--~g~~~~~~~G----~~~~~~l~~fi~~~ 166 (316)
.|...++++.||+. .+|+++++ +|+.+..+.+ .++.++|.+.|+..
T Consensus 84 i~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~L 163 (233)
T 2v2g_A 84 VKCLSGVKGDMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSL 163 (233)
T ss_dssp HHHHHTCCSSCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHhhCcccCCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 01234677888885 57999999 6777766654 35788999888875
Q ss_pred h
Q 021221 167 T 167 (316)
Q Consensus 167 ~ 167 (316)
.
T Consensus 164 q 164 (233)
T 2v2g_A 164 Q 164 (233)
T ss_dssp H
T ss_pred H
Confidence 4
No 243
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=98.50 E-value=7.8e-07 Score=73.84 Aligned_cols=88 Identities=18% Similarity=0.367 Sum_probs=68.2
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCC--C---------------------------------
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAI--R--------------------------------- 124 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~--~--------------------------------- 124 (316)
.++++||+|+.-.||+|+++.|.+.++.+.+++...+......- .
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~~~~~~~~~~~~~~~~~ 99 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSFMGGNMGQAMSKAYATMIALEVEDKMVPVMFNRIHTL 99 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEECSSSSGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEecCCCCCchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999988754443322110 0
Q ss_pred ----------------------------------------hhhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHHHHHH
Q 021221 125 ----------------------------------------PSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYS 164 (316)
Q Consensus 125 ----------------------------------------~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~fi~ 164 (316)
..+++++||+|+||+++ ||+.+....|..+.+++.+.|+
T Consensus 100 ~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~gv~gTPtfiI-NGky~v~~~~~~s~e~~~~~i~ 178 (184)
T 4dvc_A 100 RKPPKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVHRFDKQFQDSGLTGVPAVVV-NNRYLVQGQSAKSLDEYFDLVN 178 (184)
T ss_dssp CCCCSSHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHTCCSSSEEEE-TTTEEECGGGCSSHHHHHHHHH
T ss_pred hhccchHHHHHHHHHHhCCCHHHHHHHHhCHHHHHHHHHHHHHHHHcCCCcCCEEEE-CCEEeeCCcCCCCHHHHHHHHH
Confidence 04567889999999876 9987666667788999999988
Q ss_pred HhhC
Q 021221 165 DVTA 168 (316)
Q Consensus 165 ~~~~ 168 (316)
..+.
T Consensus 179 ~Ll~ 182 (184)
T 4dvc_A 179 YLLT 182 (184)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 7764
No 244
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=98.47 E-value=5.6e-07 Score=74.65 Aligned_cols=50 Identities=4% Similarity=0.104 Sum_probs=38.1
Q ss_pred CcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhh-hHHHHHHHHHcC--CCc-EEEEE
Q 021221 65 DEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNF-RPSFSVLSSLYS--SIP-HFAIE 119 (316)
Q Consensus 65 ~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~-~p~~~~la~~~~--~~~-~v~~~ 119 (316)
+.+++.+++ ..++.+++.||++||++|+.. .|.|+++.++|. ++. .+++.
T Consensus 33 ~~v~l~~~~-----~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is 86 (171)
T 2pwj_A 33 STTPVNDIF-----KDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVA 86 (171)
T ss_dssp CCEEHHHHH-----TTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEE
T ss_pred ceEEHHHHh-----CCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 677777741 223577788999999999998 999999988874 466 66653
No 245
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.46 E-value=8.6e-08 Score=76.08 Aligned_cols=75 Identities=13% Similarity=0.254 Sum_probs=49.7
Q ss_pred EEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCC---h----hhHhhcCCCccceEEEEeCceeEEEe---CCC
Q 021221 85 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIR---P----SILSKYGVHGFPTLFLLNSSMRVRYH---GSR 154 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~---~----~l~~~~~I~~~Pti~l~~g~~~~~~~---G~~ 154 (316)
++.|+++||++|+++.+.++++.-. +...+.+.. + .+.+.+|+.++|+++ ++|+.+..+. +..
T Consensus 29 vvvf~~~~Cp~C~~~~~~L~~~~i~------~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~-i~G~~igg~~~l~~~~ 101 (130)
T 2cq9_A 29 VVIFSKTSCSYCTMAKKLFHDMNVN------YKVVELDLLEYGNQFQDALYKMTGERTVPRIF-VNGTFIGGATDTHRLH 101 (130)
T ss_dssp EEEEECSSCSHHHHHHHHHHHHTCC------CEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE-ETTEEEEEHHHHHHHH
T ss_pred EEEEEcCCChHHHHHHHHHHHcCCC------cEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE-ECCEEEcChHHHHHHH
Confidence 4449999999999999999987422 222333333 3 378899999999984 4877654432 223
Q ss_pred CHHHHHHHHHHh
Q 021221 155 TLDSLVAFYSDV 166 (316)
Q Consensus 155 ~~~~l~~fi~~~ 166 (316)
....|.++|++.
T Consensus 102 ~~~~L~~~L~~~ 113 (130)
T 2cq9_A 102 KEGKLLPLVHQC 113 (130)
T ss_dssp HHTSSHHHHHHH
T ss_pred HcCcHHHHHHHc
Confidence 344566666654
No 246
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=98.43 E-value=9e-07 Score=76.71 Aligned_cols=103 Identities=12% Similarity=0.081 Sum_probs=74.3
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCC-ChHHH-----hhhHHHHHHHHHcCCCcEEEEEeC--------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASW-CPFSR-----NFRPSFSVLSSLYSSIPHFAIEES-------- 121 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~W-C~~Ck-----~~~p~~~~la~~~~~~~~v~~~~~-------- 121 (316)
+..+...+++.+++.++ .+++++|.||+.| ||.|. ...|.|.++ |.++..+++...
T Consensus 30 dFtL~d~~G~~vsLsd~-------~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~gv~VvgIS~Ds~~~~~~f 99 (224)
T 3keb_A 30 SFMLVDDQKHDAALESF-------SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WPHLKLIVITVDSPSSLARA 99 (224)
T ss_dssp CCEEEETTSCEEEGGGG-------TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CTTSEEEEEESSCHHHHHHH
T ss_pred CeEEECCCCCEEeHHHh-------CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cCCCEEEEEECCCHHHHHHH
Confidence 44556667888887776 6789999999999 99999 888888776 566555544311
Q ss_pred -------------CC-ChhhHhhcCCCc---------cceEEEE--eCceeEEEe-----CCCCHHHHHHHHHHhhC
Q 021221 122 -------------AI-RPSILSKYGVHG---------FPTLFLL--NSSMRVRYH-----GSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 122 -------------~~-~~~l~~~~~I~~---------~Pti~l~--~g~~~~~~~-----G~~~~~~l~~fi~~~~~ 168 (316)
|. +.++++.|||.. .|+++++ +|+.+..+. +..+.+++.+.|+....
T Consensus 100 ~~~~gl~~fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~~ 176 (224)
T 3keb_A 100 RHEHGLPNIALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEGEQ 176 (224)
T ss_dssp HHHHCCTTCEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHHH
T ss_pred HHHcCCCCceEEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhhh
Confidence 12 357889999975 7999999 566655544 24568888888887654
No 247
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.42 E-value=1.5e-08 Score=77.40 Aligned_cols=51 Identities=10% Similarity=0.087 Sum_probs=44.7
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHH---------------HHHHhHHhhhhhHhHhhccceeh
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFTWRR 242 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f---------------~~~~~~i~~~Ptl~~~~~~~~~~ 242 (316)
.+++.| ++ |||++|+.+ .|.+..+|..+ ++.+|+|.++||+.+|.+|.-+.
T Consensus 22 ~vvv~F-~a--~wC~~C~~~--~p~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~V~~~PT~~~~~~G~~v~ 87 (105)
T 3zzx_A 22 LVVIDF-YA--TWCGPCKMI--APKLEELSQSMSDVVFLKVDVDECEDIAQDNQIACMPTFLFMKNGQKLD 87 (105)
T ss_dssp EEEEEE-EC--TTCHHHHHH--HHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEEEE
T ss_pred EEEEEE-EC--CCCCCccCC--CcchhhhhhccCCeEEEEEecccCHHHHHHcCCCeecEEEEEECCEEEE
Confidence 367888 99 999999999 99999999887 34899999999999999887543
No 248
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=98.42 E-value=5.3e-07 Score=76.06 Aligned_cols=36 Identities=14% Similarity=0.360 Sum_probs=30.2
Q ss_pred CCeEEEEEEcCCChHHHhhhHHH---HHHHHHcCCCcEE
Q 021221 81 HEYVAVLFYASWCPFSRNFRPSF---SVLSSLYSSIPHF 116 (316)
Q Consensus 81 ~~~vlV~Fya~WC~~Ck~~~p~~---~~la~~~~~~~~v 116 (316)
+++++|+||+.|||+|+++.|.+ +++.+.+++.+.+
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~ 52 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRM 52 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCE
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEE
Confidence 47899999999999999999987 6888888763333
No 249
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.39 E-value=1.2e-07 Score=76.80 Aligned_cols=77 Identities=13% Similarity=0.232 Sum_probs=47.8
Q ss_pred EEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCCh----hhHhhcCCCccceEEEEeCceeEEEe---CCCCHH
Q 021221 85 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRP----SILSKYGVHGFPTLFLLNSSMRVRYH---GSRTLD 157 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~----~l~~~~~I~~~Pti~l~~g~~~~~~~---G~~~~~ 157 (316)
++.|+++|||+|+++.+.++++.-.| ..+.++..+..+ .+.+.+|+.++|+++ ++|+.+..+. +.....
T Consensus 51 Vvvf~~~~Cp~C~~~k~~L~~~~i~~---~~vdId~~~~~~~~~~~L~~~~g~~tvP~if-i~G~~igG~d~l~~l~~~g 126 (146)
T 2ht9_A 51 VVIFSKTSCSYCTMAKKLFHDMNVNY---KVVELDLLEYGNQFQDALYKMTGERTVPRIF-VNGTFIGGATDTHRLHKEG 126 (146)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHTCCC---EEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE-ETTEEEESHHHHHHHHHTT
T ss_pred EEEEECCCChhHHHHHHHHHHcCCCe---EEEECccCcCCHHHHHHHHHHhCCCCcCeEE-ECCEEEeCchHHHHHHHcC
Confidence 34499999999999999999874322 223332111113 478899999999984 4776543321 112234
Q ss_pred HHHHHHHH
Q 021221 158 SLVAFYSD 165 (316)
Q Consensus 158 ~l~~fi~~ 165 (316)
.|.+++++
T Consensus 127 ~L~~~L~~ 134 (146)
T 2ht9_A 127 KLLPLVHQ 134 (146)
T ss_dssp CHHHHHHH
T ss_pred hHHHHHHH
Confidence 45666654
No 250
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=98.37 E-value=1.1e-06 Score=76.07 Aligned_cols=97 Identities=7% Similarity=0.126 Sum_probs=69.1
Q ss_pred eCCcccHHHHHhHHhccCCC--eEEEEEEcCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeC-----------------
Q 021221 63 EGDEVSLQMALNMVHKNSHE--YVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEES----------------- 121 (316)
Q Consensus 63 ~~~~~~~~~~~~~i~~~~~~--~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~----------------- 121 (316)
+| .+++.++ .++ .+|+.||++||+.|....|.+.++.++|.+ +..+++.-.
T Consensus 20 ~G-~v~l~d~-------~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~ 91 (220)
T 1xcc_A 20 DG-DFELYKY-------IENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGK 91 (220)
T ss_dssp SS-CEEHHHH-------TTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHT
T ss_pred CC-cEeHHHH-------cCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 56 6778887 444 455556899999999999999999988854 344443210
Q ss_pred ----------CCChhhHhhcCCC------------ccceEEEE--eCceeEEEeC----CCCHHHHHHHHHHhh
Q 021221 122 ----------AIRPSILSKYGVH------------GFPTLFLL--NSSMRVRYHG----SRTLDSLVAFYSDVT 167 (316)
Q Consensus 122 ----------~~~~~l~~~~~I~------------~~Pti~l~--~g~~~~~~~G----~~~~~~l~~fi~~~~ 167 (316)
|....+++.||+. .+|+++++ +|+.+..+.+ .++.++|.+.|+...
T Consensus 92 ~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 92 LNKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQ 165 (220)
T ss_dssp CSCCCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CCCCcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 1124678888883 47999999 6777766654 468899998888754
No 251
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=98.36 E-value=1.1e-06 Score=73.92 Aligned_cols=86 Identities=15% Similarity=0.113 Sum_probs=64.1
Q ss_pred CCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEe-----------------C--CC------------------
Q 021221 81 HEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEE-----------------S--AI------------------ 123 (316)
Q Consensus 81 ~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~-----------------~--~~------------------ 123 (316)
+++++|+|+..|||||+++.|.++++.+.+ ++.+..+.- . ..
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~v~~~~~p~~~~~~~~~aa~a~~Aa~~q~g~~~~~~~~~~lf~a~~~~~ 100 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-GTDIGKMHITFNQSAHIASMFYYAAEMQVDGAPDHAFMEDLFAATQMGE 100 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-TSCCEEEECCSSSHHHHHHHHHHHHHTTSSSSCCHHHHHHHHHHHTCCT
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-CCeEEEEeccCCccchHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHhc
Confidence 578999999999999999999999999887 432211100 0 00
Q ss_pred C----------------------------------------hhhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHHHHH
Q 021221 124 R----------------------------------------PSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFY 163 (316)
Q Consensus 124 ~----------------------------------------~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~fi 163 (316)
. ..+++++||+|+||+++ ||+......|..+.+.+.+.|
T Consensus 101 ~~~~~~~~~~L~~~a~~~Gl~d~~~~~~~~~~~~~~~v~~~~~~a~~~gv~GtPtfvv-ng~~~v~~~Ga~~~e~~~~~i 179 (185)
T 3feu_A 101 GTTLTEQQEAYSKAFTSRGLVSPYDFNEEQRDTLIKKVDNAKMLSEKSGISSVPTFVV-NGKYNVLIGGHDDPKQIADTI 179 (185)
T ss_dssp TSCHHHHHHHHHHHHHTTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCCSSSEEEE-TTTEEECGGGCSSHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCEEEE-CCEEEEecCCCCCHHHHHHHH
Confidence 0 02345678899999986 888777778999999999998
Q ss_pred HHhhC
Q 021221 164 SDVTA 168 (316)
Q Consensus 164 ~~~~~ 168 (316)
+..+.
T Consensus 180 ~~ll~ 184 (185)
T 3feu_A 180 RYLLE 184 (185)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 87653
No 252
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.36 E-value=1.5e-06 Score=73.09 Aligned_cols=86 Identities=17% Similarity=0.284 Sum_probs=62.6
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeC--------------------------------------
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEES-------------------------------------- 121 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~-------------------------------------- 121 (316)
+++++|+.||.+|||+|+.+.|.++++.+.+++.+.+.....
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~~~~~s~~aa~a~~aa~~~~~~~~~~~~lf~~~~~~~~ 100 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKI 100 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEECCCSGGGHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSS
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEeccccCcccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHhCC
Confidence 468899999999999999999999999999875322221110
Q ss_pred ----------------CC--------------------ChhhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHHHHHHH
Q 021221 122 ----------------AI--------------------RPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSD 165 (316)
Q Consensus 122 ----------------~~--------------------~~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~fi~~ 165 (316)
.- +..++.++||.|+||+ ++||+.. ..|..+.+.|.+.|++
T Consensus 101 ~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~-ving~~~--~~g~~~~~~l~~~i~~ 177 (195)
T 2znm_A 101 RLENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQKLTEQYRIDSTPTV-IVGGKYR--VIFNNGFDGGVHTIKE 177 (195)
T ss_dssp CTTSHHHHHHHHHTCSSSCHHHHHHHHTSHHHHHHHHHHHHHHHHTTCCSSSEE-EETTTEE--ECCCSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCCCCeE-EECCEEE--EcCCCCHHHHHHHHHH
Confidence 00 0134677899999995 4487643 3577788888888887
Q ss_pred hhC
Q 021221 166 VTA 168 (316)
Q Consensus 166 ~~~ 168 (316)
.+.
T Consensus 178 ~l~ 180 (195)
T 2znm_A 178 LVA 180 (195)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 253
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=98.35 E-value=7e-07 Score=65.84 Aligned_cols=73 Identities=12% Similarity=0.100 Sum_probs=52.0
Q ss_pred EEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCC--CC----hhhHhhcCCCccceEEEEeCceeEEEeCCCCHH
Q 021221 84 VAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA--IR----PSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLD 157 (316)
Q Consensus 84 vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~--~~----~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~ 157 (316)
.++.|+++||++|++..+.++++.-.| ..+.++..+ .. +++.+.+++.++|++++ +|+ +.|..+.+
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~~gi~~---~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~-~g~----~i~G~~~~ 84 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKREGVDF---EVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK-GDK----HVLGYNEE 84 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHHHTCCC---EEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE-TTE----EEESCCHH
T ss_pred eEEEEECCCChHHHHHHHHHHHcCCCc---EEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE-CCE----EEeCCCHH
Confidence 367799999999999999999875332 223332111 22 56778899999999987 663 23445899
Q ss_pred HHHHHHH
Q 021221 158 SLVAFYS 164 (316)
Q Consensus 158 ~l~~fi~ 164 (316)
+|.++++
T Consensus 85 ~l~~~l~ 91 (92)
T 3ic4_A 85 KLKELIR 91 (92)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9999875
No 254
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.34 E-value=5.4e-06 Score=65.12 Aligned_cols=80 Identities=15% Similarity=0.213 Sum_probs=65.9
Q ss_pred cCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eC-ceeEEEeC----
Q 021221 79 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NS-SMRVRYHG---- 152 (316)
Q Consensus 79 ~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g-~~~~~~~G---- 152 (316)
+.+++++|-|+++||++| .+.|.++|+.+++ ..++..+ +++++++|++. .|++++| +. .....|.|
T Consensus 37 ~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~~d-~~F~~t~---~~~v~~~~~v~-~~~vvlfkkfde~~~~~~g~~~~ 108 (124)
T 2l4c_A 37 AATEVAVIGFFQDLEIPA---VPILHSMVQKFPG-VSFGIST---DSEVLTHYNIT-GNTICLFRLVDNEQLNLEDEDIE 108 (124)
T ss_dssp HTSSEEEEEECSCTTSTH---HHHHHHHHHHCTT-SEEEEEC---CHHHHHHTTCC-SSCEEEEETTTTEEEEECHHHHT
T ss_pred hcCCCEEEEEECCCCChh---HHHHHHHHHhCCC-ceEEEEC---hHHHHHHcCCC-CCeEEEEEcCCCCceeecCcccC
Confidence 467889999999999999 6799999999944 4555543 37799999998 8999999 43 45677886
Q ss_pred CCCHHHHHHHHHHh
Q 021221 153 SRTLDSLVAFYSDV 166 (316)
Q Consensus 153 ~~~~~~l~~fi~~~ 166 (316)
..+.++|.+||..+
T Consensus 109 ~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 109 SIDATKLSRFIEIN 122 (124)
T ss_dssp TCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHh
Confidence 68999999999875
No 255
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.30 E-value=4.8e-06 Score=69.83 Aligned_cols=34 Identities=12% Similarity=0.234 Sum_probs=30.4
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCC
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI 113 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~ 113 (316)
+.+.+++.|+.+|||+|..+.|.+.++.+.+++.
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~ 57 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKD 57 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTT
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCCc
Confidence 3567999999999999999999999999988763
No 256
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=98.30 E-value=9.4e-07 Score=64.83 Aligned_cols=68 Identities=19% Similarity=0.434 Sum_probs=47.2
Q ss_pred EEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCC--CChhhHhhc-CCCccceEEEEeCceeEEEeCCCCHHHHH
Q 021221 84 VAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA--IRPSILSKY-GVHGFPTLFLLNSSMRVRYHGSRTLDSLV 160 (316)
Q Consensus 84 vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~--~~~~l~~~~-~I~~~Pti~l~~g~~~~~~~G~~~~~~l~ 160 (316)
.++.|+++||++|+++.+.+++..- .+...+.+ ..+++.+.+ ++.++|+++ ++|+.+ | ..+++.
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~i------~~~~vdv~~~~~~~l~~~~~~~~~vP~l~-~~g~~i----~--g~~~i~ 73 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKGV------KYTDIDASTSLRQEMVQRANGRNTFPQIF-IGDYHV----G--GCDDLY 73 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHTC------CEEEECSCHHHHHHHHHHHHSSCCSCEEE-ETTEEC----C--SHHHHH
T ss_pred eEEEEECCCChhHHHHHHHHHHcCC------CcEEEECCHHHHHHHHHHhCCCCCcCEEE-ECCEEE----e--ChHHHH
Confidence 4778999999999999999988632 23333443 446788889 999999985 376543 2 334555
Q ss_pred HHHH
Q 021221 161 AFYS 164 (316)
Q Consensus 161 ~fi~ 164 (316)
++++
T Consensus 74 ~~~~ 77 (89)
T 2klx_A 74 ALEN 77 (89)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 257
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.29 E-value=2.4e-06 Score=70.69 Aligned_cols=81 Identities=15% Similarity=0.144 Sum_probs=59.1
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHc--CCCcEEEEEeCC-----------------------------------
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLY--SSIPHFAIEESA----------------------------------- 122 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~--~~~~~v~~~~~~----------------------------------- 122 (316)
+.+.+|+.|+..|||+|+.+.|.++++.+.| ++.+.+......
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~lf~~~ 105 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFDKEKESLQRGNVMHHYIDYSAPEQALSALHKMFATQ 105 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECCCCSTTTHHHHHHHTTCCTTCHHHHHHHHHHHHHTH
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHcC
Confidence 4578899999999999999999999988888 553332221110
Q ss_pred -------------------------------CChhhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHHHHHH
Q 021221 123 -------------------------------IRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYS 164 (316)
Q Consensus 123 -------------------------------~~~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~fi~ 164 (316)
.+..+++++||.|+||+++ ||+ .+.|..+.+.|.+.|+
T Consensus 106 ~~~~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~a~~~gv~gtPt~vv-ng~---~~~G~~~~~~l~~~i~ 174 (175)
T 1z6m_A 106 DEWGNLTLEEVATYAEKNLGLKEQKDATLVSAVIAEANAAHIQFVPTIII-GEY---IFDESVTEEELRGYIE 174 (175)
T ss_dssp HHHTTSCHHHHHHHHHHTSCCCCCCCHHHHHHHHHHHHHHTCCSSCEEEE-TTE---EECTTCCHHHHHHHHT
T ss_pred hhhccCCHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHcCCCCcCeEEE-CCE---EccCCCCHHHHHHHhc
Confidence 0113456789999999654 876 4578889999988875
No 258
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.29 E-value=6.8e-07 Score=69.62 Aligned_cols=59 Identities=12% Similarity=0.258 Sum_probs=41.4
Q ss_pred EEEEEcCCChHHHhh-hHHHHHHHHHcCCCcEEEEEeCCCC-------hhhHhhcCCCccceEEEEeCcee
Q 021221 85 AVLFYASWCPFSRNF-RPSFSVLSSLYSSIPHFAIEESAIR-------PSILSKYGVHGFPTLFLLNSSMR 147 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~-~p~~~~la~~~~~~~~v~~~~~~~~-------~~l~~~~~I~~~Pti~l~~g~~~ 147 (316)
++.|+++|||+|+++ .+.++++.. .. ..+...+.+.+ .++.+.+|+.++|++ +++|+.+
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~--~~-i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v-fi~g~~i 93 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV--PR-SKVLVLQLNDMKEGADIQAALYEINGQRTVPNI-YINGKHI 93 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC--CG-GGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE-EETTEEE
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC--CC-CCeEEEECccCCChHHHHHHHHHHhCCCCcCEE-EECCEEE
Confidence 666999999999999 888877541 11 23333344433 258889999999997 3477654
No 259
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=98.28 E-value=1.7e-06 Score=70.16 Aligned_cols=83 Identities=17% Similarity=0.346 Sum_probs=61.3
Q ss_pred cCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEE---------------------------------------
Q 021221 79 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIE--------------------------------------- 119 (316)
Q Consensus 79 ~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~--------------------------------------- 119 (316)
.+.+.+++.|..++||+|+++.+.++++ +++..+.+.
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~~ 87 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM----TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVG 87 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC----CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCTT
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc----CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCCc
Confidence 3568899999999999999999998765 332111110
Q ss_pred --eCC----CChhhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 120 --ESA----IRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 120 --~~~----~~~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
.|+ ++.++++++||+++||+++-||+ .+.|..+.+.|.++|++...
T Consensus 88 ~~~~~~~v~~~~~la~~~gI~gtPt~vi~nG~---~i~G~~~~~~l~~~i~~~~~ 139 (147)
T 3gv1_A 88 GSICDNPVAETTSLGEQFGFNGTPTLVFPNGR---TQSGYSPMPQLEEIIRKNQQ 139 (147)
T ss_dssp CCCCSCSHHHHHHHHHHTTCCSSCEEECTTSC---EEESCCCTTHHHHHHHHTSC
T ss_pred cHHHHHHHHHHHHHHHHhCCCccCEEEEECCE---EeeCCCCHHHHHHHHHHHHH
Confidence 010 12367889999999999975565 47799999999999987654
No 260
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.25 E-value=4.1e-07 Score=77.43 Aligned_cols=44 Identities=9% Similarity=0.189 Sum_probs=37.3
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHH---HHHHHHcCCCcEEEEEeCCC
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSF---SVLSSLYSSIPHFAIEESAI 123 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~---~~la~~~~~~~~v~~~~~~~ 123 (316)
.+++++|+||+.|||||+++.|.+ +++.+.+++.+.+...+.+.
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~ 158 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNF 158 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCc
Confidence 467999999999999999999999 99999998766666655544
No 261
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.21 E-value=3.6e-06 Score=78.31 Aligned_cols=130 Identities=9% Similarity=0.033 Sum_probs=92.3
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-e-CceeEEEeCC-CCH
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-N-SSMRVRYHGS-RTL 156 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~-g~~~~~~~G~-~~~ 156 (316)
.++.++|.||++||+ ...+.|.++|..+.+...++... +.+++++|+|+. |++++| . .+....|.|. ++.
T Consensus 143 ~~~~~vv~ff~~~~~---~~~~~f~~~A~~~~~~~~F~~~~---~~~~~~~~~v~~-p~i~lf~~~~~~~~~y~g~~~~~ 215 (367)
T 3us3_A 143 EDEIKLIGYFKNKDS---EHYKAFKEAAEEFHPYIPFFATF---DSKVAKKLTLKL-NEIDFYEAFMEEPVTIPDKPNSE 215 (367)
T ss_dssp CSSCEEEEECSCTTC---HHHHHHHHHHHHHTTTSCEEEEC---CHHHHHHHTCCT-TCEEEECTTCSSCEECSSSSCCH
T ss_pred CCCcEEEEEECCCCc---hHHHHHHHHHHhhcCCcEEEEEC---CHHHHHHcCCCC-CeEEEEcCCCCCCeecCCCCCCH
Confidence 568899999999876 55678999999998766666653 367999999996 999999 3 3567889984 899
Q ss_pred HHHHHHHHHhhCCCC-CCCcccccccCc--cccCCCccccccCCcccCChhhhhchHHHHHHHHHHHH
Q 021221 157 DSLVAFYSDVTASLD-KISPDKVGKASN--HEKHNNTEEESCPFSWARSPENLLQQETYLALATAFVL 221 (316)
Q Consensus 157 ~~l~~fi~~~~~~~~-~~~~~~~~~~~~--~~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~ 221 (316)
++|.+||..+.-+.. ..+.+....... .....++.| +. +++..+.++ .+.+..+|..|..
T Consensus 216 ~~l~~fi~~~~~p~v~elt~~~~~~~~~~~~~~~~~~~f-~~--~~~~~~~~~--~~~l~~vA~~~~~ 278 (367)
T 3us3_A 216 EEIVNFVEEHRRSTLRKLKPESMYETWEDDMDGIHIVAF-AE--EADPDGYEF--LEILKSVAQDNTD 278 (367)
T ss_dssp HHHHHHHHHTCSCSEEECCGGGHHHHHHSCBTTEEEEEE-CC--TTSHHHHHH--HHHHHHHHHHTTT
T ss_pred HHHHHHHHHcCccceeecChhhHHHHHhhccCCcEEEEE-Ec--CCChhHHHH--HHHHHHHHHHcCC
Confidence 999999999876543 223322211111 111122334 44 566667888 7889999998863
No 262
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=98.19 E-value=7.1e-07 Score=67.61 Aligned_cols=75 Identities=9% Similarity=0.071 Sum_probs=49.6
Q ss_pred CeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeC--CCChhh----HhhcCCCccceEEEEeCceeEEEeCCCC
Q 021221 82 EYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEES--AIRPSI----LSKYGVHGFPTLFLLNSSMRVRYHGSRT 155 (316)
Q Consensus 82 ~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~--~~~~~l----~~~~~I~~~Pti~l~~g~~~~~~~G~~~ 155 (316)
+..++.|+++|||+|+++++.++++.-.| ..+.++.. +..+++ .+.+|+.++|++++ +|+ ++.|..+
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~~~i~y---~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i-~~~---~~igg~~ 93 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTDLGVDF---DYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII-NDE---KAIVGFK 93 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHHHTBCE---EEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE-TTT---EEEESCC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCCc---EEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE-CCC---EEEEcCC
Confidence 34577899999999999999999875333 12222210 111223 23469999999876 442 4566778
Q ss_pred HHHHHHHH
Q 021221 156 LDSLVAFY 163 (316)
Q Consensus 156 ~~~l~~fi 163 (316)
.++|.++|
T Consensus 94 ~~~l~~~L 101 (103)
T 3nzn_A 94 EKEIRESL 101 (103)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 88888775
No 263
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=98.18 E-value=4.3e-06 Score=59.83 Aligned_cols=68 Identities=15% Similarity=0.300 Sum_probs=45.8
Q ss_pred EEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCC----hhhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHH
Q 021221 85 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIR----PSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLV 160 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~----~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~ 160 (316)
++.|+++||++|+++.+.+++.. +. +...+.+.+ .++.+.+++.++|+++ ++|+.+ . ..++|.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~~-----i~-~~~~~i~~~~~~~~~~~~~~~~~~vP~l~-~~g~~i---~---g~~~i~ 69 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSKG-----VS-FQELPIDGNAAKREEMIKRSGRTTVPQIF-IDAQHI---G---GYDDLY 69 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHT-----CC-CEEEECTTCSHHHHHHHHHHSSCCSCEEE-ETTEEE---E---SHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHCC-----CC-cEEEECCCCHHHHHHHHHHhCCCCcCEEE-ECCEEE---e---CHHHHH
Confidence 67799999999999999998752 22 222233333 2466789999999984 377543 2 245676
Q ss_pred HHHHH
Q 021221 161 AFYSD 165 (316)
Q Consensus 161 ~fi~~ 165 (316)
+++++
T Consensus 70 ~~~~~ 74 (82)
T 1fov_A 70 ALDAR 74 (82)
T ss_dssp HHHHT
T ss_pred HHHHC
Confidence 66653
No 264
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=98.17 E-value=6.9e-06 Score=61.80 Aligned_cols=61 Identities=13% Similarity=0.136 Sum_probs=41.7
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhh----Hhhc-CCCccceEEEEeCcee
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSI----LSKY-GVHGFPTLFLLNSSMR 147 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l----~~~~-~I~~~Pti~l~~g~~~ 147 (316)
....-++.|+++|||+|++..+.++++.-. +...|.+.+++. .+.. |..++|+++ ++|+.+
T Consensus 13 ~~~~~v~vy~~~~Cp~C~~ak~~L~~~~i~------y~~idI~~~~~~~~~l~~~~~g~~~vP~if-i~g~~i 78 (99)
T 3qmx_A 13 AVSAKIEIYTWSTCPFCMRALALLKRKGVE------FQEYCIDGDNEAREAMAARANGKRSLPQIF-IDDQHI 78 (99)
T ss_dssp CCCCCEEEEECTTCHHHHHHHHHHHHHTCC------CEEEECTTCHHHHHHHHHHTTTCCCSCEEE-ETTEEE
T ss_pred cCCCCEEEEEcCCChhHHHHHHHHHHCCCC------CEEEEcCCCHHHHHHHHHHhCCCCCCCEEE-ECCEEE
Confidence 345567889999999999999999987422 222344444444 3444 999999883 477543
No 265
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=98.17 E-value=1.8e-05 Score=69.57 Aligned_cols=130 Identities=14% Similarity=0.168 Sum_probs=86.1
Q ss_pred cCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEEeC--------ceeEEE
Q 021221 79 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNS--------SMRVRY 150 (316)
Q Consensus 79 ~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~~g--------~~~~~~ 150 (316)
+.++.++|-|+++|| ....+.|.++|+.+.+...++... +.+++++|++.+ |++++|.. .....|
T Consensus 22 ~~~~v~vvgff~~~~---~~~~~~f~~~A~~lr~~~~F~~~~---~~~v~~~~~~~~-p~i~~fk~~~~~~kf~e~~~~y 94 (252)
T 2h8l_A 22 SDKDASIVGFFDDSF---SEAHSEFLKAASNLRDNYRFAHTN---VESLVNEYDDNG-EGIILFRPSHLTNKFEDKTVAY 94 (252)
T ss_dssp TSSSCEEEEEESCTT---SHHHHHHHHHHHHTTTTSCEEEEC---CHHHHHHHCSSS-EEEEEECCGGGCCTTSCSEEEC
T ss_pred hcCCeEEEEEECCCC---ChHHHHHHHHHHhcccCcEEEEEC---hHHHHHHhCCCC-CcEEEEcchhhccccccccccc
Confidence 456788999999984 566789999999996655665542 477999999997 99999932 346788
Q ss_pred -eCCCCHHHHHHHHHHhhCCCCC-CCcccccccCccccCCCccccccCCcccCChh---hhhchHHHHHHHHHHHH
Q 021221 151 -HGSRTLDSLVAFYSDVTASLDK-ISPDKVGKASNHEKHNNTEEESCPFSWARSPE---NLLQQETYLALATAFVL 221 (316)
Q Consensus 151 -~G~~~~~~l~~fi~~~~~~~~~-~~~~~~~~~~~~~~~~~v~f~~~~~pw~~~~~---~~l~~~~~~~lA~~f~~ 221 (316)
.|..+.++|.+||..+.-+... .+.+....- .+...++.| +.+ ....+.+ .+ ...+..+|..|..
T Consensus 95 ~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~--~~~~~~v~~-~~~-~~~~~~~~~~~~--~~~~~~vA~~~~~ 164 (252)
T 2h8l_A 95 TEQKMTSGKIKKFIQENIFGICPHMTEDNKDLI--QGKDLLIAY-YDV-DYEKNAKGSNYW--RNRVMMVAKKFLD 164 (252)
T ss_dssp CCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHH--SSSSEEEEE-ECC-BTTTBHHHHHHH--HHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHhcccCCeeecccccHhhh--cCCCeEEEE-eec-chhhcchhHHHH--HHHHHHHHHHccc
Confidence 8999999999999998765532 122222111 111223333 220 1222222 34 5677788888863
No 266
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.16 E-value=1.5e-07 Score=73.68 Aligned_cols=51 Identities=16% Similarity=0.170 Sum_probs=44.6
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH---------------------HHHhHHhhhhhHhHhhccce
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV---------------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~---------------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
.+.+++.| ++ |||++|+++ .|.|..+|..|. +.+++|.+|||+.+|.+|.-
T Consensus 33 ~~~vlv~F-~a--~wC~~C~~~--~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~ 104 (127)
T 3h79_A 33 EKDVFVLY-YV--PWSRHSVAA--MRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGFPTMRYYTRIDK 104 (127)
T ss_dssp TCEEEEEE-EC--TTCHHHHHH--HHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEECSSCS
T ss_pred CCCEEEEE-EC--CccHHHHHH--hHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccCCEEEEEeCCCC
Confidence 44578899 99 999999999 999999998763 38999999999999998863
No 267
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=98.14 E-value=6.2e-06 Score=61.27 Aligned_cols=76 Identities=13% Similarity=0.203 Sum_probs=53.5
Q ss_pred EEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhh-----cCCCccceEEEEeCceeEEEeCCCCHHH
Q 021221 84 VAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSK-----YGVHGFPTLFLLNSSMRVRYHGSRTLDS 158 (316)
Q Consensus 84 vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~-----~~I~~~Pti~l~~g~~~~~~~G~~~~~~ 158 (316)
-++.|..+|||+|++.+..+++. ++.+- ..|.+.+++..+. .|.+++|++++-+|.... ..+.++
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~-----gi~y~-~idi~~d~~~~~~~~~~~~G~~tVP~I~i~Dg~~l~----~~~~~e 74 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN-----RIAYD-EVDIEHNRAAAEFVGSVNGGNRTVPTVKFADGSTLT----NPSADE 74 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT-----TCCCE-EEETTTCHHHHHHHHHHSSSSSCSCEEEETTSCEEE----SCCHHH
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc-----CCceE-EEEcCCCHHHHHHHHHHcCCCCEeCEEEEeCCEEEe----CCCHHH
Confidence 47889999999999999888763 33322 3344455543332 278899998765665432 348899
Q ss_pred HHHHHHHhhCC
Q 021221 159 LVAFYSDVTAS 169 (316)
Q Consensus 159 l~~fi~~~~~~ 169 (316)
|.+++.+..|.
T Consensus 75 l~~~L~el~gL 85 (92)
T 2lqo_A 75 VKAKLVKIAGL 85 (92)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHhcCC
Confidence 99999998884
No 268
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=98.12 E-value=6.2e-06 Score=62.55 Aligned_cols=57 Identities=12% Similarity=0.267 Sum_probs=39.4
Q ss_pred eEEEEEEc-----CCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChh----hHhhcCCCccceEEEEeCcee
Q 021221 83 YVAVLFYA-----SWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPS----ILSKYGVHGFPTLFLLNSSMR 147 (316)
Q Consensus 83 ~vlV~Fya-----~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~----l~~~~~I~~~Pti~l~~g~~~ 147 (316)
.++| |++ +|||+|+++.+.++++. +. +...|.+.+++ +.+.+|+.++|+++ ++|+.+
T Consensus 18 ~vvv-f~~g~~~~~~C~~C~~~~~~L~~~~-----i~-~~~vdi~~~~~~~~~l~~~~g~~~vP~v~-i~g~~i 83 (105)
T 2yan_A 18 SVML-FMKGNKQEAKCGFSKQILEILNSTG-----VE-YETFDILEDEEVRQGLKAYSNWPTYPQLY-VKGELV 83 (105)
T ss_dssp SEEE-EESBCSSSBCTTHHHHHHHHHHHHT-----CC-CEEEEGGGCHHHHHHHHHHHTCCSSCEEE-ETTEEE
T ss_pred CEEE-EEecCCCCCCCccHHHHHHHHHHCC-----CC-eEEEECCCCHHHHHHHHHHHCCCCCCeEE-ECCEEE
Confidence 3444 777 99999999999998874 22 23334444444 56668999999984 477543
No 269
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=98.12 E-value=1.1e-06 Score=67.59 Aligned_cols=72 Identities=13% Similarity=0.321 Sum_probs=45.4
Q ss_pred HHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCC-CC----hhhHhhcCCCccceEEEEe
Q 021221 69 LQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA-IR----PSILSKYGVHGFPTLFLLN 143 (316)
Q Consensus 69 ~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~-~~----~~l~~~~~I~~~Pti~l~~ 143 (316)
+++.++.++.. ++ ++.|+++|||+|++..+.++++.-.| ..+.++... .. ..+.+.+|+.++|+++ ++
T Consensus 8 ~~~~~~~~i~~-~~--v~vy~~~~Cp~C~~~~~~L~~~~i~~---~~~di~~~~~~~~~~~~~l~~~~g~~tvP~if-i~ 80 (113)
T 3rhb_A 8 MEESIRKTVTE-NT--VVIYSKTWCSYCTEVKTLFKRLGVQP---LVVELDQLGPQGPQLQKVLERLTGQHTVPNVF-VC 80 (113)
T ss_dssp HHHHHHHHHHH-SS--EEEEECTTCHHHHHHHHHHHHTTCCC---EEEEGGGSTTHHHHHHHHHHHHHSCCSSCEEE-ET
T ss_pred HHHHHHHHHhc-CC--EEEEECCCChhHHHHHHHHHHcCCCC---eEEEeecCCCChHHHHHHHHHHhCCCCcCEEE-EC
Confidence 45555555433 33 67799999999999999998864332 223332210 01 2255667999999983 47
Q ss_pred Ccee
Q 021221 144 SSMR 147 (316)
Q Consensus 144 g~~~ 147 (316)
|+.+
T Consensus 81 g~~i 84 (113)
T 3rhb_A 81 GKHI 84 (113)
T ss_dssp TEEE
T ss_pred CEEE
Confidence 7544
No 270
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=98.11 E-value=6.7e-06 Score=69.45 Aligned_cols=34 Identities=15% Similarity=0.320 Sum_probs=29.8
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHH---HHHHHHcCCC
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSF---SVLSSLYSSI 113 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~---~~la~~~~~~ 113 (316)
.+++++|+|+..|||+|+++.|.+ +++.+.+++.
T Consensus 20 ~~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~ 56 (191)
T 3l9s_A 20 AGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEG 56 (191)
T ss_dssp CSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTT
T ss_pred CCCCeEEEEECCCChhHHHhChhccchHHHHHhCCCC
Confidence 347899999999999999999986 6999999853
No 271
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=98.09 E-value=9e-06 Score=74.39 Aligned_cols=104 Identities=12% Similarity=0.099 Sum_probs=76.2
Q ss_pred CCcceEEeCCcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcCCCcEEEEEeC-------------
Q 021221 56 QDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSSIPHFAIEES------------- 121 (316)
Q Consensus 56 ~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~------------- 121 (316)
+..+...+|+++++.++ .++++++.|| +.|||.|....+.|.+ ..+++...+++...
T Consensus 6 ~F~l~~~~G~~~~Lsd~-------~Gk~vvl~F~p~~~tp~C~~e~~~~~~--~~~~~~~v~gis~D~~~~~~~f~~~~~ 76 (322)
T 4eo3_A 6 HFELLTDEGKTFTHVDL-------YGKYTILFFFPKAGTSGSTREAVEFSR--ENFEKAQVVGISRDSVEALKRFKEKND 76 (322)
T ss_dssp CCEEEETTSCEEEGGGT-------TTSEEEEEECSSTTSHHHHHHHHHHHH--SCCTTEEEEEEESCCHHHHHHHHHHHT
T ss_pred CcEEECCCcCEEeHHHh-------CCCeEEEEEECCCCCCCCHHHHHHHHH--HhhCCCEEEEEeCCCHHHHHHHHHhhC
Confidence 55667788999888887 6899999999 6799999998888865 34455555554311
Q ss_pred -------CCChhhHhhcCCC----ccceEEEE--eCceeEEEeCCC---CHHHHHHHHHHhhC
Q 021221 122 -------AIRPSILSKYGVH----GFPTLFLL--NSSMRVRYHGSR---TLDSLVAFYSDVTA 168 (316)
Q Consensus 122 -------~~~~~l~~~~~I~----~~Pti~l~--~g~~~~~~~G~~---~~~~l~~fi~~~~~ 168 (316)
|.+..+++.|||. .+|+++++ +|.....|.+.. ..+++.+++++...
T Consensus 77 l~fp~l~D~~~~v~~~ygv~~~~~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~~~ 139 (322)
T 4eo3_A 77 LKVTLLSDPEGILHEFFNVLENGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRLIE 139 (322)
T ss_dssp CCSEEEECTTCHHHHHTTCEETTEECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHHHH
T ss_pred CceEEEEcCchHHHHhcCCCCCCcCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhhch
Confidence 2345788999994 57899999 677777777643 46888888887653
No 272
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=98.08 E-value=4.7e-06 Score=60.59 Aligned_cols=74 Identities=14% Similarity=0.240 Sum_probs=50.7
Q ss_pred EEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCC----hhhHhhcCC-----CccceEEEEeCceeEEEeCCC
Q 021221 84 VAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIR----PSILSKYGV-----HGFPTLFLLNSSMRVRYHGSR 154 (316)
Q Consensus 84 vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~----~~l~~~~~I-----~~~Pti~l~~g~~~~~~~G~~ 154 (316)
.++.|+++|||+|++..+.++++.-.| ..+.+ |.+.+ +++.+.+|. .++|++++ +|+.+ |
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~~i~~---~~~~v-d~~~~~~~~~el~~~~g~~~~~~~~vP~i~i-~g~~i----~-- 73 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEENNIAF---DETII-DDYAQRSKFYDEMNQSGKVIFPISTVPQIFI-DDEHI----G-- 73 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTTCCC---EEEEC-CSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE-TTEEE----E--
T ss_pred EEEEEEcCCChhHHHHHHHHHHcCCCc---eEEEe-ecCCChhHHHHHHHHhCCCCCCCCccCEEEE-CCEEE----e--
Confidence 478899999999999999988754222 22222 22122 457788888 99999954 77533 2
Q ss_pred CHHHHHHHHHHhhC
Q 021221 155 TLDSLVAFYSDVTA 168 (316)
Q Consensus 155 ~~~~l~~fi~~~~~ 168 (316)
..+++.+++++..+
T Consensus 74 g~~~i~~~~~~~~~ 87 (89)
T 3msz_A 74 GFTELKANADKILN 87 (89)
T ss_dssp SHHHHHHTHHHHTT
T ss_pred ChHHHHHHHHHHhc
Confidence 56778888877665
No 273
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.03 E-value=5.4e-05 Score=63.19 Aligned_cols=127 Identities=12% Similarity=0.109 Sum_probs=80.9
Q ss_pred CCCchhHHHHHHhhhcCCCccccCCCCCcceEEeCCcccHHHHHhHHh---ccCCCeEEEEEEcCCChHHHhhhH-----
Q 021221 30 LCPTESVTDSIFRFQDSFCPISCNDFQDIVGVIEGDEVSLQMALNMVH---KNSHEYVAVLFYASWCPFSRNFRP----- 101 (316)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~i~---~~~~~~vlV~Fya~WC~~Ck~~~p----- 101 (316)
..|..++..|+..|...=....+. .- .-+++++++... ++..|+++|+++++||..|..+..
T Consensus 11 ~dp~~~~~~F~~~f~~~yg~~~p~--------F~--~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~ 80 (178)
T 2ec4_A 11 ENEGDALLQFTAEFSSRYGDCHPV--------FF--IGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCA 80 (178)
T ss_dssp CCHHHHHHHHHHHHHHHHCSCCCC--------CC--CSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTC
T ss_pred CChHHHHHHHHHHHHHHhCCCCCC--------ee--eCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCC
Confidence 445666777777653321111111 11 233888866652 457899999999999999999853
Q ss_pred -HHHHHHHHcCCCcEEEEEeCCC--------------ChhhHh---hcCCCccceEEEE--eC---ceeEEEeCCCCHHH
Q 021221 102 -SFSVLSSLYSSIPHFAIEESAI--------------RPSILS---KYGVHGFPTLFLL--NS---SMRVRYHGSRTLDS 158 (316)
Q Consensus 102 -~~~~la~~~~~~~~v~~~~~~~--------------~~~l~~---~~~I~~~Pti~l~--~g---~~~~~~~G~~~~~~ 158 (316)
.+.++-+. +.+..+.+..+. ...++. .|++.+||++.++ ++ +.+.+..|..+.++
T Consensus 81 ~~V~~~l~~--nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ 158 (178)
T 2ec4_A 81 ESIVSYLSQ--NFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDE 158 (178)
T ss_dssp HHHHHHHHH--TEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTCSEEEEECCCSSCCCEEEEECSCCCHHH
T ss_pred HHHHHHHHc--CEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCCCeEEEEEcCCCceEEEEEEeCCCCHHH
Confidence 33333332 345555543321 123443 3899999999999 32 45678999999999
Q ss_pred HHHHHHHhhC
Q 021221 159 LVAFYSDVTA 168 (316)
Q Consensus 159 l~~fi~~~~~ 168 (316)
|.+.+.+...
T Consensus 159 ll~~L~~~~e 168 (178)
T 2ec4_A 159 LMMRLMAAME 168 (178)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9988876653
No 274
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.98 E-value=1.1e-05 Score=59.15 Aligned_cols=56 Identities=14% Similarity=0.387 Sum_probs=39.2
Q ss_pred EEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCCh----hhHhhcCCCccceEEEEeCce
Q 021221 84 VAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRP----SILSKYGVHGFPTLFLLNSSM 146 (316)
Q Consensus 84 vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~----~l~~~~~I~~~Pti~l~~g~~ 146 (316)
.++.|+++||++|+++.+.+++.. +. +...+.+.++ ++.+.+++.++|++ +++|+.
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~~-----i~-~~~~di~~~~~~~~~l~~~~~~~~vP~l-~~~g~~ 66 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARKG-----AE-FNEIDASATPELRAEMQERSGRNTFPQI-FIGSVH 66 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTT-----CC-CEEEESTTSHHHHHHHHHHHTSSCCCEE-EETTEE
T ss_pred cEEEEECCCChhHHHHHHHHHHcC-----CC-cEEEECCCCHHHHHHHHHHhCCCCcCEE-EECCEE
Confidence 477899999999999999998752 22 2233444443 45568899999975 347754
No 275
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.98 E-value=2.2e-05 Score=76.44 Aligned_cols=150 Identities=9% Similarity=0.054 Sum_probs=98.8
Q ss_pred HhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEE-eC-ceeEEE
Q 021221 73 LNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NS-SMRVRY 150 (316)
Q Consensus 73 ~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g-~~~~~~ 150 (316)
+..++.+-.+++.+.++..-|..|+.+...++++++.-+. +.+...+ ... ...|++.+. +| ..-.+|
T Consensus 10 l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~s~~-i~~~~~~--~~~--------~~~p~~~~~~~~~~~~i~f 78 (521)
T 1hyu_A 10 LRAYLEKLTKPVELIATLDDSAKSAEIKELLAEIAELSDK-VTFKEDN--TLP--------VRKPSFLITNPGSQQGPRF 78 (521)
T ss_dssp HHHHHTTCCSCEEEEEECCSSHHHHHHHHHHHHHHTTCTT-EEEEECT--TSS--------SCSSEEEEECTTCCCSCEE
T ss_pred HHHHHHhCCCCEEEEEEeCCCcchHHHHHHHHHHHHhCCc-eEEEEcC--Ccc--------cCCCEEEEecCCCcceEEE
Confidence 3344445567888888888899999999999999876543 3343321 110 568999998 44 345899
Q ss_pred eCCCCHHHHHHHHHHh---hCCCCCCCcccccccCc-cccCCCccccccCCcccCChhhhhchHHHHHHHHHHH------
Q 021221 151 HGSRTLDSLVAFYSDV---TASLDKISPDKVGKASN-HEKHNNTEEESCPFSWARSPENLLQQETYLALATAFV------ 220 (316)
Q Consensus 151 ~G~~~~~~l~~fi~~~---~~~~~~~~~~~~~~~~~-~~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~------ 220 (316)
.|-..=.++..|+... .+...+.+.+.+..... ......+.| ++ |||++|+.+ .|.+..+|..+-
T Consensus 79 ~g~p~g~e~~s~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~i~~f-~a--~~C~~C~~~--~~~l~~~a~~~~~v~~~~ 153 (521)
T 1hyu_A 79 AGSPLGHEFTSLVLALLWTGGHPSKEAQSLLEQIRDIDGDFEFETY-YS--LSCHNCPDV--VQALNLMAVLNPRIKHTA 153 (521)
T ss_dssp ESCCCGGGHHHHHHHHHHHTTCCCCSCHHHHHHHHHCCSCEEEEEE-EC--TTCSSHHHH--HHHHHHHHHHCTTEEEEE
T ss_pred eccCcchhHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCcceEEE-EC--CCCcCcHHH--HHHHHHHHhHcCceEEEE
Confidence 9876666666666664 34322222221111111 122234455 78 999999999 999999998762
Q ss_pred ---------HHHhHHhhhhhHhHhhccce
Q 021221 221 ---------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 221 ---------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
..+|+|.+.||+.+ +|..
T Consensus 154 vd~~~~~~~~~~~~i~svPt~~i--~g~~ 180 (521)
T 1hyu_A 154 IDGGTFQNEITERNVMGVPAVFV--NGKE 180 (521)
T ss_dssp EETTTCHHHHHHTTCCSSSEEEE--TTEE
T ss_pred EechhhHHHHHHhCCCccCEEEE--CCEE
Confidence 37899999999955 6653
No 276
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=97.98 E-value=4.8e-07 Score=73.76 Aligned_cols=51 Identities=6% Similarity=-0.057 Sum_probs=45.8
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHHH----------------HHhHHhhhhhHhHhhcccee
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFVL----------------LRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~----------------~~~~i~~~Ptl~~~~~~~~~ 241 (316)
..++|+| +| +||++|+.+ .|.+++||..+.. .+|+|.+-||+.+|.+|.-+
T Consensus 42 k~VVVdF-~A--~WCgPCk~m--~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~siPT~~fFk~G~~v 108 (160)
T 2av4_A 42 RLVCIRF-GH--DYDPDCMKM--DELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDPVSVMFFYRNKHM 108 (160)
T ss_dssp SEEEEEE-EC--TTSHHHHHH--HHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSSEEEEEEETTEEE
T ss_pred CEEEEEE-EC--CCChhHHHH--HHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCCCEEEEEECCEEE
Confidence 4478999 99 999999999 9999999999842 99999999999999999854
No 277
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=97.93 E-value=1.6e-06 Score=69.28 Aligned_cols=67 Identities=15% Similarity=0.025 Sum_probs=53.0
Q ss_pred CCCcccccccCccccCCCccccccCCccc--CChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHh
Q 021221 172 KISPDKVGKASNHEKHNNTEEESCPFSWA--RSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLL 233 (316)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~v~f~~~~~pw~--~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~ 233 (316)
..+|++.+.. ....++|+| ++ +|| ++|+.+ .|.+++||..|. ..+|+|++.||+.
T Consensus 22 ~~~F~~~v~~--~~~~vlVdF-~A--~wCr~gpCk~i--aPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~siPTli 94 (137)
T 2qsi_A 22 EATVDDFIAH--SGKIVVLFF-RG--DAVRFPEAADL--AVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVCPSLA 94 (137)
T ss_dssp TTTHHHHHHT--SSSEEEEEE-CC--CTTTCTTHHHH--HHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSSSEEE
T ss_pred HhHHHHHHhc--CCCcEEEEE-eC--CccCCCchhhH--HhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccCCEEE
Confidence 3455554432 223588999 99 899 999999 999999999983 3999999999999
Q ss_pred Hhhccceehhhh
Q 021221 234 IFAQFTWRRLIR 245 (316)
Q Consensus 234 ~~~~~~~~~~~~ 245 (316)
+|.+|..+....
T Consensus 95 lFkdG~~v~~~v 106 (137)
T 2qsi_A 95 VVQPERTLGVIA 106 (137)
T ss_dssp EEECCEEEEEEE
T ss_pred EEECCEEEEEEe
Confidence 999998655543
No 278
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=97.88 E-value=7e-07 Score=67.97 Aligned_cols=53 Identities=15% Similarity=0.178 Sum_probs=45.1
Q ss_pred cccCCCccccccCCcccCChhhhhchHHHHHHHHHH---------------HHHHhHHhhhhhHhHhhcccee
Q 021221 184 HEKHNNTEEESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 184 ~~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f---------------~~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
..+.+++.| ++ +||++|+.+ .|.+..++..| ++.+++|.++||+.+|.+|..+
T Consensus 23 ~~k~vlv~f-~a--~wC~~C~~~--~p~l~~l~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~ 90 (109)
T 3f3q_A 23 QDKLVVVDF-YA--TWCGPCKMI--APMIEKFSEQYPQADFYKLDVDELGDVAQKNEVSAMPTLLLFKNGKEV 90 (109)
T ss_dssp SSSCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred cCCEEEEEE-EC--CcCHhHHHH--HHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCCccCEEEEEECCEEE
Confidence 345577888 99 999999999 99999999886 2489999999999999887643
No 279
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=97.86 E-value=1.2e-06 Score=66.09 Aligned_cols=53 Identities=9% Similarity=-0.064 Sum_probs=39.9
Q ss_pred cccCCCccccccCCcccCChhhhhchHHHHHHHHHH---------------HHHHhHHhhhhhHhHhhcccee
Q 021221 184 HEKHNNTEEESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 184 ~~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f---------------~~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
..+.+++.| ++ |||++|+.+ .|.+..++..| ++.+|+|.++||+.+|.+|..+
T Consensus 17 ~~~~vlv~f-~a--~wC~~C~~~--~p~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~ 84 (105)
T 4euy_A 17 EQQLVLLFI-KT--ENCGVCDVM--LRKVNYVLENYNYVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKEI 84 (105)
T ss_dssp CSSEEEEEE-EE--SSCHHHHHH--HHHHHHHHHTCTTEEEEEEEECCC---------CCCCEEEEEETTEEE
T ss_pred cCCCEEEEE-eC--CCCcchHHH--HHHHHHHHHHcCCceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeEE
Confidence 345578888 99 999999999 99999999876 2489999999999999888643
No 280
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.84 E-value=1.3e-06 Score=69.24 Aligned_cols=50 Identities=14% Similarity=0.119 Sum_probs=43.0
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH-------------------HHHhHHhhhhhHhHhhccce
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV-------------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~-------------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
+.+++.| ++ +||++|+++ .|.+..++..+. +.+|+|.++||+.+|.+|..
T Consensus 35 ~~vlv~f-~a--~wC~~C~~~--~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~ 103 (140)
T 2dj1_A 35 DTVLLEF-YA--PWCGHCKQF--APEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTIKILKKGQA 103 (140)
T ss_dssp SEEEEEE-CC--TTCHHHHTT--HHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSEEEEEETTEE
T ss_pred CeEEEEE-EC--CCCHHHHHh--hHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCeEEEEECCcE
Confidence 4477888 99 999999999 999999998763 37899999999999977763
No 281
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.84 E-value=1.1e-06 Score=66.22 Aligned_cols=51 Identities=6% Similarity=-0.000 Sum_probs=43.3
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHH---------------HHHHhHHhhhhhHhHhhcccee
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f---------------~~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
+.+++.| ++ |||++|+.+ .|.+..++..+ ++.+|+|.++||+.+|.+|..+
T Consensus 22 ~~v~v~f-~a--~wC~~C~~~--~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 87 (107)
T 1gh2_A 22 RLAVVKF-TM--RGCGPCLRI--APAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISATPTFQFFRNKVRI 87 (107)
T ss_dssp SCEEEEE-EC--SSCHHHHHH--HHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CEEEEEE-EC--CCChhhHHH--HHHHHHHHHHCCCcEEEEEECccCHHHHHhcCCCcccEEEEEECCeEE
Confidence 3467788 99 999999999 99999999876 2478999999999999887643
No 282
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.83 E-value=3e-06 Score=67.52 Aligned_cols=52 Identities=10% Similarity=-0.091 Sum_probs=45.1
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhcccee
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
.+.+++.| ++ |||++|+.+ .|.+..++..+. +.+++|.++||+.+|.+|..+
T Consensus 24 ~~~vlv~F-~a--~wC~~C~~~--~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~ 91 (140)
T 3hz4_A 24 KKPVVVMF-YS--PACPYCKAM--EPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPTFKFFCHGRPV 91 (140)
T ss_dssp SSCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEESEEEEEETTEEE
T ss_pred CCcEEEEE-EC--CCChhHHHH--HHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcCCEEEEEeCCcEE
Confidence 45577888 99 999999999 999999998873 489999999999999888754
No 283
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=97.80 E-value=2.7e-06 Score=67.38 Aligned_cols=52 Identities=12% Similarity=0.088 Sum_probs=43.9
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHh-hcccee
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIF-AQFTWR 241 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~-~~~~~~ 241 (316)
++.+++.| ++ +||++|+.+ .|.+..++..|. +.+|+|.++||+.+| .+|..+
T Consensus 38 ~k~~lv~f-~a--~wC~~C~~~--~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~G~~~ 106 (136)
T 2l5l_A 38 DKPAIVDF-YA--DWCGPCKMV--APILDELAKEYDGQIVIYKVDTEKEQELAGAFGIRSIPSILFIPMEGKPE 106 (136)
T ss_dssp SSCEEEEE-EC--TTSHHHHHH--HHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSCEEEEECSSSCCE
T ss_pred CCEEEEEE-EC--CcCHHHHHH--HHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHcCCCCCCEEEEECCCCcEE
Confidence 34577888 99 999999999 999999998763 488999999999999 677644
No 284
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.79 E-value=2.3e-06 Score=67.83 Aligned_cols=54 Identities=9% Similarity=0.066 Sum_probs=44.2
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHh-hccceehh
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIF-AQFTWRRL 243 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~-~~~~~~~~ 243 (316)
...+++.| ++ +||++|+.+ .|.+..++..|. +.+|+|.++||+.+| .+|..+++
T Consensus 51 ~k~vlv~f-~a--~wC~~C~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~~g~~~~~ 121 (141)
T 3hxs_A 51 DKPAIVDF-YA--DWCGPCKMV--APILEELSKEYAGKIYIYKVNVDKEPELARDFGIQSIPTIWFVPMKGEPQVN 121 (141)
T ss_dssp SSCEEEEE-EC--TTCTTHHHH--HHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEECSSSCCEEE
T ss_pred CCEEEEEE-EC--CCCHHHHHH--HHHHHHHHHHhcCceEEEEEECCCCHHHHHHcCCCCcCEEEEEeCCCCEEEE
Confidence 34577888 99 999999999 999999998873 489999999999999 45543333
No 285
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.78 E-value=5.4e-06 Score=64.67 Aligned_cols=50 Identities=20% Similarity=0.121 Sum_probs=43.4
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccc
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~ 239 (316)
.+.+++.| ++ |||++|+.+ .|.+..++..+. +.+|+|.++||+.+|.+|.
T Consensus 35 ~~~~lv~f-~a--~wC~~C~~~--~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~ 100 (130)
T 2dml_A 35 DGLWLVEF-YA--PWCGHCQRL--TPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANK 100 (130)
T ss_dssp SSCEEEEE-EC--TTCSTTGGG--HHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCSSSEEEEESSCT
T ss_pred CCeEEEEE-EC--CCCHHHHhh--CHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCccCEEEEEeCCC
Confidence 44578888 99 999999999 999999998762 4889999999999998776
No 286
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.78 E-value=2.6e-06 Score=71.16 Aligned_cols=64 Identities=13% Similarity=0.034 Sum_probs=49.0
Q ss_pred CCCcccccccCccccCCCccccccC-----CcccCChhhhhchHHHHHHHHHHH-----H----------------HHhH
Q 021221 172 KISPDKVGKASNHEKHNNTEEESCP-----FSWARSPENLLQQETYLALATAFV-----L----------------LRLV 225 (316)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~v~f~~~~-----~pw~~~~~~~l~~~~~~~lA~~f~-----~----------------~~~~ 225 (316)
..++++++.. ..+..++|.| ++. -+||++|+.+ +|.|+.+|..|. . .+|+
T Consensus 25 ~~nF~~~v~~-~~~~~vvV~F-~A~~~~~~~~wCgpCk~l--~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la~~~~ 100 (178)
T 3ga4_A 25 ADNYPLLSRG-VPGYFNILYI-TMRGTNSNGMSCQLCHDF--EKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLVKDLK 100 (178)
T ss_dssp TTTHHHHTTC-CTTCEEEEEE-ECCSBCTTSCBCHHHHHH--HHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHHHHTT
T ss_pred HHHHHHHHcc-cCCCcEEEEE-eCCCCCCCCCCChhHHHH--HHHHHHHHHHhhhccCCCCEEEEEEECccCHHHHHHcC
Confidence 3455554432 1233467888 662 2599999999 999999999886 2 8999
Q ss_pred HhhhhhHhHhhccc
Q 021221 226 YIFLPTLLIFAQFT 239 (316)
Q Consensus 226 i~~~Ptl~~~~~~~ 239 (316)
|.++|||++|+.|.
T Consensus 101 I~siPtl~~F~~g~ 114 (178)
T 3ga4_A 101 LQNVPHLVVYPPAE 114 (178)
T ss_dssp CCSSCEEEEECCCC
T ss_pred CCCCCEEEEEcCCC
Confidence 99999999999986
No 287
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.78 E-value=2.6e-06 Score=64.38 Aligned_cols=51 Identities=14% Similarity=0.097 Sum_probs=44.1
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhcccee
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
+.+++.| ++ +||++|+.+ .|.+..++..+. +.+|+|.++||+.+|.+|..+
T Consensus 23 ~~vlv~f-~a--~~C~~C~~~--~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~ 89 (111)
T 3gnj_A 23 KACLVMF-SR--KNCHVCQKV--TPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQILYFKDGEYK 89 (111)
T ss_dssp CCEEEEE-EC--SSCHHHHHH--HHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSCEEEEEETTEEE
T ss_pred CEEEEEE-eC--CCChhHHHH--HHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcCCEEEEEECCEEE
Confidence 4477888 99 999999999 999999998863 489999999999999888643
No 288
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=97.78 E-value=8.1e-07 Score=68.46 Aligned_cols=51 Identities=16% Similarity=0.210 Sum_probs=43.6
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHH---------------HHHHhHHhhhhhHhHhhcccee
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f---------------~~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
+.+++.| ++ +||++|+.+ .|.+..++..| ++.+|+|.++||+.+|.+|..+
T Consensus 32 k~vlv~F-~a--~wC~~C~~~--~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~ 97 (116)
T 3qfa_C 32 KLVVVDF-SA--TWCGPSKMI--KPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKSMPTFQFFKKGQKV 97 (116)
T ss_dssp SCEEEEE-EC--TTCHHHHHH--HHHHHHHHTTCTTSEEEEEETTTTHHHHHHTTCCSSSEEEEESSSSEE
T ss_pred CEEEEEE-EC--CCCHHHHHH--HHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCccccEEEEEeCCeEE
Confidence 3467788 99 999999999 99999999876 2489999999999999888643
No 289
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.76 E-value=3.4e-06 Score=64.89 Aligned_cols=52 Identities=6% Similarity=-0.113 Sum_probs=43.0
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH--------------------HHHhHHhhhhhHhHhhcccee
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV--------------------LLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~--------------------~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
...+++.| ++ |||++|+++ .|.+..++..+. +.+++|.++||+.+|.+|..+
T Consensus 29 ~~~~~v~f-~a--~wC~~C~~~--~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~~~~G~~~ 100 (118)
T 1zma_A 29 KETATFFI-GR--KTCPYCRKF--AGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHITDGQIN 100 (118)
T ss_dssp TCCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSSCEEEEEETTEEE
T ss_pred CCeEEEEE-EC--CCCccHHHH--HHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCCCeEEEEECCEEE
Confidence 34577888 99 999999999 999999987651 268899999999999887643
No 290
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=97.75 E-value=1.2e-06 Score=68.26 Aligned_cols=52 Identities=13% Similarity=-0.052 Sum_probs=45.6
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHHHH------------HHhHHhhhhhHhHhhccceehh
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAFVL------------LRLVYIFLPTLLIFAQFTWRRL 243 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~------------~~~~i~~~Ptl~~~~~~~~~~~ 243 (316)
.+++.| ++ |||++|+.+ .|.++.||..|-. .+|+|.+.||+.+|.+|.-+..
T Consensus 25 ~vvv~F-~a--~wc~~C~~~--~p~l~~la~~~~~v~f~kvd~d~~~~~~~v~~~PT~~~fk~G~~v~~ 88 (118)
T 3evi_A 25 WVIIHL-YR--SSIPMCLLV--NQHLSLLARKFPETKFVKAIVNSCIQHYHDNCLPTIFVYKNGQIEAK 88 (118)
T ss_dssp EEEEEE-EC--TTSHHHHHH--HHHHHHHHHHCTTSEEEEEEGGGTSTTCCGGGCSEEEEEETTEEEEE
T ss_pred eEEEEE-eC--CCChHHHHH--HHHHHHHHHHCCCCEEEEEEhHHhHHHCCCCCCCEEEEEECCEEEEE
Confidence 478889 99 999999999 9999999998732 6899999999999999986543
No 291
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=97.74 E-value=0.00013 Score=62.75 Aligned_cols=96 Identities=21% Similarity=0.251 Sum_probs=68.8
Q ss_pred CCcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcCC--CcEEEEEeC-------------------
Q 021221 64 GDEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEES------------------- 121 (316)
Q Consensus 64 ~~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~~------------------- 121 (316)
++++++.++ .++++++.|| +.||+.|....+.|++..++|.. ...+++.-.
T Consensus 42 ~~~vsLsd~-------~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~~~~~~~~~~ 114 (216)
T 3sbc_A 42 FDEVSLDKY-------KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGLG 114 (216)
T ss_dssp EEEECGGGG-------TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCC
T ss_pred CcEEehHHh-------CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHHHHHHHHHHhCCcc
Confidence 356777776 6789999999 99999999999999999998863 444444311
Q ss_pred --------CCChhhHhhcCCC------ccceEEEE--eCceeEEEe----CCCCHHHHHHHHHHh
Q 021221 122 --------AIRPSILSKYGVH------GFPTLFLL--NSSMRVRYH----GSRTLDSLVAFYSDV 166 (316)
Q Consensus 122 --------~~~~~l~~~~~I~------~~Pti~l~--~g~~~~~~~----G~~~~~~l~~fi~~~ 166 (316)
|.+.++++.|||- .++.++++ +|....... -.|+.+++...|+..
T Consensus 115 ~l~fpllsD~~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~Al 179 (216)
T 3sbc_A 115 PINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAF 179 (216)
T ss_dssp SCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CcccceEeCCCCHHHHHcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHHh
Confidence 1234789999983 46778888 444432221 357889998888764
No 292
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=97.73 E-value=3.2e-06 Score=67.81 Aligned_cols=52 Identities=10% Similarity=0.129 Sum_probs=44.8
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhcccee
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
.+.+++.| ++ +||++|+.+ .|.+..++..+. ..+|+|.++||+.+|.+|..+
T Consensus 55 ~k~vlv~F-~a--~wC~~C~~~--~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~ 122 (148)
T 3p2a_A 55 DLPMVIDF-WA--PWCGPCRSF--APIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSIPTIMLYRNGKMI 122 (148)
T ss_dssp SSCEEEEE-EC--SSCHHHHHH--HHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CCcEEEEE-EC--CCCHHHHHH--HHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCCccCEEEEEECCeEE
Confidence 44578888 99 999999999 999999999872 489999999999999888643
No 293
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.72 E-value=2.4e-06 Score=66.44 Aligned_cols=48 Identities=21% Similarity=0.154 Sum_probs=42.3
Q ss_pred CCccccccCCcccCChhhhhchHHHHHHHHHHH-----------------HHHhHHhhhhhHhHhhccce
Q 021221 188 NNTEEESCPFSWARSPENLLQQETYLALATAFV-----------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 188 ~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~-----------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
+++.| ++ +||++|+.+ .|.+..++..+. +.+|+|.++||+.+|.+|..
T Consensus 25 vlv~f-~a--~wC~~C~~~--~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~ 89 (126)
T 1x5e_A 25 WMIEF-YA--PWCPACQNL--QPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYHCKDGEF 89 (126)
T ss_dssp EEEEE-EC--SSCHHHHHH--HHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEE
T ss_pred EEEEE-EC--CCCHHHHHH--hHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEEEEEeCCeE
Confidence 77888 99 999999999 999999998763 38899999999999977763
No 294
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=97.71 E-value=4.1e-06 Score=67.08 Aligned_cols=54 Identities=15% Similarity=0.038 Sum_probs=45.8
Q ss_pred ccCCCccccccCCcc--cCChhhhhchHHHHHHHHHHH-----------------HHHhHHhhhhhHhHhhccceehh
Q 021221 185 EKHNNTEEESCPFSW--ARSPENLLQQETYLALATAFV-----------------LLRLVYIFLPTLLIFAQFTWRRL 243 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw--~~~~~~~l~~~~~~~lA~~f~-----------------~~~~~i~~~Ptl~~~~~~~~~~~ 243 (316)
+..++|+| ++ +| |++|+.+ +|.+++||..|. ..+|+|++.||+.+|.+|..+..
T Consensus 34 ~~~vlVdF-~a--~~crCgpCk~i--aPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sIPTlilFk~G~~v~~ 106 (140)
T 2qgv_A 34 APDGVVLL-SS--DPKRTPEVSDN--PVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFPATLVFTGGNYRGV 106 (140)
T ss_dssp CSSEEEEE-CC--CTTTCTTTTHH--HHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSSSEEEEEETTEEEEE
T ss_pred CCCEEEEE-eC--CcccCCcHHHH--HhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccCCEEEEEECCEEEEE
Confidence 34478888 88 78 8999999 999999998872 28999999999999999986443
No 295
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.69 E-value=7.3e-06 Score=73.12 Aligned_cols=52 Identities=12% Similarity=-0.034 Sum_probs=45.5
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhcccee
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
.+.++|.| ++ |||++|+.+ .|.+..++..|. +.+|+|.++||+.+|.+|..+
T Consensus 26 ~~~v~v~f-~a--~wC~~C~~~--~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 93 (287)
T 3qou_A 26 TTPVLFYF-WS--ERSQHCLQL--TPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPV 93 (287)
T ss_dssp TSCEEEEE-EC--TTCTTTTTT--HHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSSEEEEEETTEEE
T ss_pred CCeEEEEE-EC--CCChHHHHH--HHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCCeEEEEECCEEE
Confidence 45578899 99 999999999 999999999873 489999999999999888644
No 296
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=97.67 E-value=3.2e-06 Score=68.41 Aligned_cols=51 Identities=8% Similarity=-0.044 Sum_probs=44.3
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhcccee
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
+.+++.| ++ |||++|+.+ .|.+..++..|. +.+|+|.++||+.++.+|.-+
T Consensus 24 k~vlv~F-~a--~WC~~C~~~--~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~v 90 (149)
T 3gix_A 24 KVLVLRF-GR--DEDPVCLQL--DDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQHM 90 (149)
T ss_dssp SEEEEEE-EC--TTSHHHHHH--HHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CEEEEEE-EC--CCCHHHHHH--HHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeEEEEECCeEE
Confidence 4478888 99 999999999 999999998763 489999999999988888754
No 297
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=97.66 E-value=5e-06 Score=63.08 Aligned_cols=51 Identities=18% Similarity=0.134 Sum_probs=41.2
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHH-----------------HHHHhHHhhhhhHhHhhcccee
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAF-----------------VLLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f-----------------~~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
+.+++.| ++ +||++|+.+ .|.+..++..+ ++.+++|.++||+.+|.+|..+
T Consensus 22 ~~~~v~f-~a--~wC~~C~~~--~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 89 (112)
T 3d6i_A 22 KLIVLYF-HT--SWAEPCKAL--KQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFIIIHKGTIL 89 (112)
T ss_dssp CCEEEEE-EC--CC--CHHHH--HHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CEEEEEE-EC--CCCHHHHHH--HHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEEEEEECCEEE
Confidence 4467788 99 999999999 99999999874 2488999999999999877644
No 298
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.65 E-value=9e-06 Score=64.26 Aligned_cols=59 Identities=14% Similarity=0.238 Sum_probs=40.3
Q ss_pred EEEEEcCCChHHHhh-hHHHHHHHHHcCCCcEEEEEeCCCC-------hhhHhhcCCCccceEEEEeCcee
Q 021221 85 AVLFYASWCPFSRNF-RPSFSVLSSLYSSIPHFAIEESAIR-------PSILSKYGVHGFPTLFLLNSSMR 147 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~-~p~~~~la~~~~~~~~v~~~~~~~~-------~~l~~~~~I~~~Pti~l~~g~~~ 147 (316)
++.|+.+|||+|++. .+.++++.... + .+...+.+.. ..+.+.+|+.++|+++ ++|+.+
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~~~~~~--i-~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~vf-i~g~~i 105 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQELNVPK--S-KALVLELDEMSNGSEIQDALEEISGQKTVPNVY-INGKHI 105 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTSCCCG--G-GEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEE-ETTEEE
T ss_pred EEEEECCCCCchHHHHHHHHHhcCccC--C-CcEEEEccccCCHHHHHHHHHHHhCCCCCCEEE-ECCEEE
Confidence 778999999999999 88888764211 2 2222333222 3688889999999963 477644
No 299
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.65 E-value=1.8e-05 Score=67.10 Aligned_cols=88 Identities=10% Similarity=0.107 Sum_probs=50.7
Q ss_pred hhhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHHHHHHH------hhCCC-CC---------CCcccccccCccccCC
Q 021221 125 PSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSD------VTASL-DK---------ISPDKVGKASNHEKHN 188 (316)
Q Consensus 125 ~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~fi~~------~~~~~-~~---------~~~~~~~~~~~~~~~~ 188 (316)
...++.+||+++||+++ +|+......+. +.+++.+|+++ .+-.+ .+ .++..+... .....+
T Consensus 40 ~~~a~~~gi~gvP~fvi-ngk~~~~~~~~-~~~~~~~f~~~~~~l~~~L~s~~~p~~~~~~~~g~~y~~l~~p-~~~~~~ 116 (197)
T 1un2_A 40 EKAAADVQLRGVPAMFV-NGKYQLNPQGM-DTSNMDVFVQQYADTVKYLSEKKGGGTGAQYEDGKQYTTLEKP-VAGAPQ 116 (197)
T ss_dssp HHHHHHTTCCSSSEEEE-TTTEEECGGGS-CCSSHHHHHHHHHHHHHHHTC---------CCBTTTEEECSSC-CTTCCS
T ss_pred HHHHHHcCCCcCCEEEE-cceEecCcccc-ccccHHHHHHHHHHHHHHHHhCcccccccccCCCCCceEccCC-CCCCCE
Confidence 45788999999999855 77654432232 22223222222 11111 00 122222221 123457
Q ss_pred CccccccCCcccCChhhhhchHHH---HHHHHHHH
Q 021221 189 NTEEESCPFSWARSPENLLQQETY---LALATAFV 220 (316)
Q Consensus 189 ~v~f~~~~~pw~~~~~~~l~~~~~---~~lA~~f~ 220 (316)
+++| ++ +||+||+++ .|.| +.++..+-
T Consensus 117 vveF-f~--~~C~~C~~~--~p~~~~~~~l~~~~~ 146 (197)
T 1un2_A 117 VLEF-FS--FFCPHCYQF--EEVLHISDNVKKKLP 146 (197)
T ss_dssp EEEE-EC--TTCHHHHHH--HHTSCHHHHHTTSSC
T ss_pred EEEE-EC--CCChhHHHh--CcccccHHHHHHHCC
Confidence 8999 99 999999999 9888 77776653
No 300
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.64 E-value=5.7e-06 Score=64.65 Aligned_cols=50 Identities=24% Similarity=0.212 Sum_probs=43.7
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH--------------------HHHhHHhhhhhHhHhhccc
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV--------------------LLRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~--------------------~~~~~i~~~Ptl~~~~~~~ 239 (316)
.+.+++.| ++ +||++|+.+ .|.+..++..+. +.+|+|.++||+.+|.+|.
T Consensus 25 ~~~~lv~f-~a--~wC~~C~~~--~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~ 94 (133)
T 1x5d_A 25 EDVWMVEF-YA--PWCGHCKNL--EPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGE 94 (133)
T ss_dssp SSEEEEEE-EC--TTCHHHHTH--HHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSSEEEEEETTE
T ss_pred CCeEEEEE-EC--CCCHHHHhh--cHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeCeEEEEeCCC
Confidence 34578888 99 999999999 999999998875 2789999999999998876
No 301
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=97.62 E-value=6.1e-06 Score=67.12 Aligned_cols=50 Identities=12% Similarity=0.107 Sum_probs=43.7
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccce
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
..+++.| ++ |||++|+.+ .|.++.++..|. +.+|+|.++||+.+|.+|.-
T Consensus 65 ~~vlv~F-~a--~wC~~C~~~--~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~G~~ 130 (155)
T 2ppt_A 65 LPLLVDF-WA--PWCGPCRQM--APQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFILFHKGRE 130 (155)
T ss_dssp SCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCCSSSEEEEEETTEE
T ss_pred CcEEEEE-EC--CCCHHHHHH--HHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCCcCCEEEEEeCCeE
Confidence 3477888 99 999999999 999999999873 48999999999999987764
No 302
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=97.61 E-value=0.00043 Score=58.71 Aligned_cols=39 Identities=13% Similarity=0.253 Sum_probs=31.8
Q ss_pred hhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 126 SILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 126 ~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
.+++++||.|+||+++ ||+. +.|..+.+.|.+.|++...
T Consensus 154 ~~a~~~gV~gtPtfvv-nG~~---~~G~~~~e~l~~~i~~~~~ 192 (202)
T 3gha_A 154 DLNQKMNIQATPTIYV-NDKV---IKNFADYDEIKETIEKELK 192 (202)
T ss_dssp HHHHHTTCCSSCEEEE-TTEE---CSCTTCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCcCCEEEE-CCEE---ecCCCCHHHHHHHHHHHHH
Confidence 3456779999999987 7753 6788999999999998765
No 303
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.60 E-value=0.001 Score=53.51 Aligned_cols=93 Identities=15% Similarity=0.181 Sum_probs=67.2
Q ss_pred cCCCeEEEE-EEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeC--CCChhhHhhcCCCc--cceEEEEeC-ceeEEEe-
Q 021221 79 NSHEYVAVL-FYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEES--AIRPSILSKYGVHG--FPTLFLLNS-SMRVRYH- 151 (316)
Q Consensus 79 ~~~~~vlV~-Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~--~~~~~l~~~~~I~~--~Pti~l~~g-~~~~~~~- 151 (316)
+.+-++.+. |...--..-+..++.++++|+.|++...+...|. +....+.+.||+.. +|++++++. ....+|.
T Consensus 29 ~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl~~~~~P~v~i~~~~~~~~Ky~~ 108 (147)
T 3bj5_A 29 GGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKP 108 (147)
T ss_dssp SSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTCCGGGCSEEEEEECSSSCEEECC
T ss_pred cCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCCCcccCCEEEEEecccccccCCC
Confidence 344455444 4433334466788999999999999777777776 55567889999996 999999942 2222333
Q ss_pred --CCCCHHHHHHHHHHhhCCCC
Q 021221 152 --GSRTLDSLVAFYSDVTASLD 171 (316)
Q Consensus 152 --G~~~~~~l~~fi~~~~~~~~ 171 (316)
+..+.+.|.+|+++.+..+.
T Consensus 109 ~~~~~t~~~i~~Fv~d~l~GkL 130 (147)
T 3bj5_A 109 ESEELTAERITEFCHRFLEGKI 130 (147)
T ss_dssp SCCCCCHHHHHHHHHHHHTTCS
T ss_pred CcccCCHHHHHHHHHHHHcCCc
Confidence 77899999999999988653
No 304
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=97.58 E-value=6.3e-06 Score=64.47 Aligned_cols=51 Identities=14% Similarity=0.167 Sum_probs=43.4
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHH---------------HHHHhHHhhhhhHhHhhcccee
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f---------------~~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
+.+++.| ++ +||++|+.+ .|.+..++..| ++.+|+|.++||+.+|.+|..+
T Consensus 38 k~vvv~F-~a--~wC~~C~~~--~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i~~~G~~~ 103 (125)
T 1r26_A 38 ILTVAWF-TA--VWCGPCKTI--ERPMEKIAYEFPTVKFAKVDADNNSEIVSKCRVLQLPTFIIARSGKML 103 (125)
T ss_dssp SCEEEEE-EC--TTCHHHHHT--HHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CEEEEEE-EC--CcCHhHHHH--HHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCCcccEEEEEeCCeEE
Confidence 3467788 99 999999999 99999999876 3488999999999999887643
No 305
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=97.57 E-value=5.5e-06 Score=61.85 Aligned_cols=50 Identities=14% Similarity=0.165 Sum_probs=43.1
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHH---------------HHHHhHHhhhhhHhHhhcccee
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f---------------~~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
.+++.| ++ +||++|+.+ .|.+..++..| ++.+++|.++||+.++.+|..+
T Consensus 22 ~~~v~f-~~--~~C~~C~~~--~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 86 (105)
T 3m9j_A 22 LVVVDF-SA--TWCGPCKMI--KPFFHSLSEKYSNVIFLEVDVDDCQDVASESEVKSMPTFQFFKKGQKV 86 (105)
T ss_dssp CEEEEE-EC--TTCHHHHHH--HHHHHHHHHHSTTSEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEEE
T ss_pred eEEEEE-EC--CCChhhHHH--HHHHHHHHHHccCeEEEEEEhhhhHHHHHHcCCCcCcEEEEEECCeEE
Confidence 367778 99 999999999 99999999887 2489999999999999887643
No 306
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.55 E-value=3.7e-06 Score=63.08 Aligned_cols=52 Identities=17% Similarity=0.197 Sum_probs=44.3
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhcccee
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
...+++.| ++ +||++|+.+ .|.+..++..|. +.+++|.++||+.+|.+|..+
T Consensus 21 ~~~~lv~f-~~--~~C~~C~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~ 88 (109)
T 3tco_A 21 NKLVLVDC-WA--EWCAPCHLY--EPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPTTLIFVNGQLV 88 (109)
T ss_dssp SSEEEEEE-EC--TTCHHHHHH--HHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CCeEEEEE-EC--CCCHHHHhh--hHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccCCEEEEEcCCcEE
Confidence 34467888 99 999999999 999999999874 489999999999999777643
No 307
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.55 E-value=6.2e-06 Score=72.58 Aligned_cols=45 Identities=11% Similarity=0.091 Sum_probs=38.7
Q ss_pred ccCCCccccc--cCCcccCChhhhhchHHHHHHHHHHH------------------------HHHhHHh--hhhhHhHhh
Q 021221 185 EKHNNTEEES--CPFSWARSPENLLQQETYLALATAFV------------------------LLRLVYI--FLPTLLIFA 236 (316)
Q Consensus 185 ~~~~~v~f~~--~~~pw~~~~~~~l~~~~~~~lA~~f~------------------------~~~~~i~--~~Ptl~~~~ 236 (316)
...++|+| | + |||+ + .|.|+.+|..|. +.+|+|. +|||+++|.
T Consensus 33 ~~~vlV~F-y~~A--pWCg----l--~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~~~~~PTl~~F~ 103 (248)
T 2c0g_A 33 FPYSVVKF-DIAS--PYGE----K--HEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDDKNFPSIFLFK 103 (248)
T ss_dssp SSEEEEEE-EESS--CCSH----H--HHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCTTSCCEEEEES
T ss_pred CCCEEEEE-ECCC--CCCc----c--HHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCCcCCCCeEEEEe
Confidence 34589999 9 9 9998 8 999999998872 3578999 999999999
Q ss_pred ccc
Q 021221 237 QFT 239 (316)
Q Consensus 237 ~~~ 239 (316)
|.
T Consensus 104 -G~ 105 (248)
T 2c0g_A 104 -GN 105 (248)
T ss_dssp -SS
T ss_pred -CC
Confidence 76
No 308
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=97.55 E-value=1.3e-05 Score=62.49 Aligned_cols=51 Identities=12% Similarity=0.070 Sum_probs=44.3
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccce
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
.+.+++.| ++ +||++|+++ .|.+..++..+. +.+|+|.++||+.++.+|..
T Consensus 42 ~k~vlv~F-~a--~wC~~C~~~--~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~ 108 (128)
T 3ul3_B 42 NTVIVLYF-FA--KWCQACTMQ--STEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTM 108 (128)
T ss_dssp CSEEEEEE-EC--TTCHHHHHH--HHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEE
T ss_pred CCEEEEEE-EC--CCCHHHHHH--hHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEE
Confidence 45578888 99 999999999 999999999873 48899999999999977764
No 309
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.54 E-value=1.8e-05 Score=60.13 Aligned_cols=50 Identities=12% Similarity=0.099 Sum_probs=43.0
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccce
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
+.+++.| ++ +||++|+.+ .|.+.+++..+. +.+|+|.++||+.+|.+|..
T Consensus 18 ~~~lv~f-~a--~wC~~C~~~--~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~ 83 (112)
T 2voc_A 18 GVVLADF-WA--PWCGPSKMI--APVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKDGEV 83 (112)
T ss_dssp SEEEEEE-EC--TTBGGGGGH--HHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBSEEEEEETTEE
T ss_pred CEEEEEE-EC--CCCHHHHHH--HHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcccEEEEEeCCEE
Confidence 4467888 99 999999999 999999998873 48899999999999977763
No 310
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.54 E-value=2.8e-05 Score=61.36 Aligned_cols=64 Identities=20% Similarity=0.190 Sum_probs=49.9
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHHH-----------------HHHhHHh------hhhhHhHhhcccee-h
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAFV-----------------LLRLVYI------FLPTLLIFAQFTWR-R 242 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~-----------------~~~~~i~------~~Ptl~~~~~~~~~-~ 242 (316)
.+++.| ++ |||++|+.+ .|.+.+++..|. +.+|+|. ++||+.+|.+|.-+ +
T Consensus 28 ~vlv~f-~a--~wC~~C~~~--~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~~~~Pt~~~~~~G~~~~~ 102 (137)
T 2dj0_A 28 TWIVEF-FA--NWSNDCQSF--APIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTKQLPTLILFQGGKEAMR 102 (137)
T ss_dssp CEEEEE-CC--TTCSTTTTT--HHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSSSCSSEEEEESSSSEEEE
T ss_pred EEEEEE-EC--CCCHHHHHH--HHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCcCCCCEEEEEECCEEEEE
Confidence 367888 99 999999999 999999999872 3789998 99999999888754 3
Q ss_pred hhhcccccccchh
Q 021221 243 LIRNLKLGSLLEH 255 (316)
Q Consensus 243 ~~~~~~~~~~~~~ 255 (316)
+.+....+.+.+.
T Consensus 103 ~~G~~~~~~l~~~ 115 (137)
T 2dj0_A 103 RPQIDKKGRAVSW 115 (137)
T ss_dssp ESCBCSSSCBCCC
T ss_pred ecCcCchHHHHHH
Confidence 4444444444443
No 311
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=97.54 E-value=6.5e-06 Score=66.59 Aligned_cols=51 Identities=20% Similarity=0.174 Sum_probs=43.5
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHH---------------HHHHhHHhhhhhHhHhhcccee
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f---------------~~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
+.+++.| ++ |||++|+.+ .|.+..++..+ ++.+|+|.++||+.+|.+|..+
T Consensus 33 ~~vvv~F-~a--~wC~~C~~~--~p~l~~l~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~ 98 (153)
T 2wz9_A 33 SLLVVHF-WA--PWAPQCAQM--NEVMAELAKELPQVSFVKLEAEGVPEVSEKYEISSVPTFLFFKNSQKI 98 (153)
T ss_dssp SCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CeEEEEE-EC--CCCHhHHHH--HHHHHHHHHHcCCeEEEEEECCCCHHHHHHcCCCCCCEEEEEECCEEE
Confidence 3467788 99 999999999 99999999875 3488999999999999987643
No 312
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.52 E-value=1.2e-05 Score=59.89 Aligned_cols=51 Identities=12% Similarity=0.073 Sum_probs=44.1
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccce
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
++.+++.| ++ +||++|+.+ .|.+..++..|. +.+++|.++||+.++.+|..
T Consensus 19 ~~~~lv~f-~~--~~C~~C~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~ 85 (106)
T 3die_A 19 SGVQLVDF-WA--TACGPCKMI--APVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQP 85 (106)
T ss_dssp SSEEEEEE-EC--SBCHHHHHH--HHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSBSEEEEEETTEE
T ss_pred CCcEEEEE-EC--CCCHHHHHH--hHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcccCEEEEEeCCeE
Confidence 34577888 99 999999999 999999998873 48999999999999988764
No 313
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.52 E-value=1e-05 Score=61.20 Aligned_cols=50 Identities=8% Similarity=0.136 Sum_probs=42.6
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhcccee
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
.+++.| ++ +||++|+.+ .|.+..++..|. +.+|+|.++||+.++.+|..+
T Consensus 26 ~~vv~f-~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 91 (112)
T 1ep7_A 26 PIVVDF-TA--TWCGPCKMI--APLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVYKDGVKA 91 (112)
T ss_dssp CEEEEE-EC--TTCHHHHHH--HHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBSSEEEEEETTEEE
T ss_pred eEEEEE-EC--CCCHHHHHH--HHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcccEEEEEECCeEE
Confidence 366777 99 999999999 999999998773 378999999999999877643
No 314
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=97.51 E-value=0.0006 Score=58.94 Aligned_cols=43 Identities=16% Similarity=0.342 Sum_probs=32.1
Q ss_pred hhHhh-cCCCccceEEEE--eCcee-----EEEeCCCCHHHHHHHHHHhhC
Q 021221 126 SILSK-YGVHGFPTLFLL--NSSMR-----VRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 126 ~l~~~-~~I~~~Pti~l~--~g~~~-----~~~~G~~~~~~l~~fi~~~~~ 168 (316)
..+.+ +||+|+||++++ ||+.+ ....|..+.+.|.+.|++.++
T Consensus 161 ~~a~~~~GV~GtPtfvv~~~nG~~~~Ga~~~~~~G~~~~e~l~~~I~~~l~ 211 (226)
T 3f4s_A 161 SLAINKLGITAVPIFFIKLNDDKSYIEHNKVKHGGYKELKYFTNVIDKLYG 211 (226)
T ss_dssp HHHHHHHCCCSSCEEEEEECCTTCCCCGGGGEEESCCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCcCCEEEEEcCCCEEeeCCCCcccccccCHHHHHHHHHHHHh
Confidence 34567 999999999986 66543 234455569999999998775
No 315
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=97.51 E-value=9e-06 Score=61.57 Aligned_cols=51 Identities=18% Similarity=0.244 Sum_probs=43.2
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhcccee
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
+.+++.| ++ +||++|+.+ .|.+..++..|. +.+|+|.++||+.++.+|..+
T Consensus 25 ~~vlv~f-~a--~wC~~C~~~--~~~l~~~~~~~~~v~~~~vd~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 91 (111)
T 2pu9_C 25 KPVVLDM-FT--QWCGPSKAM--APKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVV 91 (111)
T ss_dssp SCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCSBSSEEEEESSSSEE
T ss_pred CEEEEEE-EC--CcCHhHHHH--CHHHHHHHHHCCCeEEEEEecCcchHHHHHHcCCCeeeEEEEEeCCcEE
Confidence 4467888 99 999999999 999999988762 378999999999888888743
No 316
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.47 E-value=7.9e-06 Score=62.12 Aligned_cols=51 Identities=10% Similarity=0.029 Sum_probs=43.0
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHH---------------HHHHhHHhhhhhHhHhhcccee
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f---------------~~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
+.+++.| ++ |||++|+.+ .|.+..++..+ ++.+++|.++||+.+|.+|..+
T Consensus 20 ~~~vv~f-~a--~wC~~C~~~--~~~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~v 85 (110)
T 2l6c_A 20 SDAIVFF-HK--NLCPHCKNM--EKVLDKFGARAPQVAISSVDSEARPELMKELGFERVPTLVFIRDGKVA 85 (110)
T ss_dssp SEEEEEE-EC--SSCSTHHHH--HHHHHHHHTTCTTSCEEEEEGGGCHHHHHHTTCCSSCEEEEEESSSEE
T ss_pred CCEEEEE-EC--CCCHhHHHH--HHHHHHHHHHCCCcEEEEEcCcCCHHHHHHcCCcccCEEEEEECCEEE
Confidence 4467788 99 999999999 99999998765 2478999999999999777643
No 317
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.45 E-value=9.3e-06 Score=64.41 Aligned_cols=48 Identities=17% Similarity=0.129 Sum_probs=42.4
Q ss_pred CCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccce
Q 021221 188 NNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 188 ~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
+++.| ++ +||++|+.+ .|.+..++..|. +.+|+|.++||+.+|.+|..
T Consensus 53 vvv~f-~~--~~C~~C~~~--~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~ 116 (140)
T 1v98_A 53 TLVDF-FA--PWCGPCRLV--SPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVPTLVLFRRGAP 116 (140)
T ss_dssp EEEEE-EC--TTCHHHHHH--HHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEE
T ss_pred EEEEE-EC--CCCHHHHHH--HHHHHHHHHHccCceEEEEEECCCCHHHHHHCCCCccCEEEEEeCCcE
Confidence 77888 99 999999999 999999998873 37899999999999988774
No 318
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.45 E-value=9.9e-06 Score=63.37 Aligned_cols=50 Identities=16% Similarity=0.152 Sum_probs=43.2
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH------------------HHHhHHhhhhhHhHhhccc
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV------------------LLRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~------------------~~~~~i~~~Ptl~~~~~~~ 239 (316)
...+++.| ++ |||++|+.+ .|.+..++..+. +.+|+|.++||+.+|.+|.
T Consensus 25 ~~~vlv~f-~a--~wC~~C~~~--~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~ 92 (133)
T 2dj3_A 25 KKDVLIEF-YA--PWCGHCKQL--EPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTIYFAPSGD 92 (133)
T ss_dssp TSEEEEEE-CC--TTCSHHHHH--HHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSEEEEECTTC
T ss_pred CCcEEEEE-EC--CCChhHHHH--HHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCEEEEEeCCC
Confidence 44578888 99 999999999 999999999884 1679999999999998775
No 319
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.45 E-value=0.00019 Score=55.13 Aligned_cols=56 Identities=23% Similarity=0.352 Sum_probs=38.7
Q ss_pred EEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCC--C-----hhhHhhcCCCccceEEEEeCcee
Q 021221 85 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAI--R-----PSILSKYGVHGFPTLFLLNSSMR 147 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~--~-----~~l~~~~~I~~~Pti~l~~g~~~ 147 (316)
++.|+++|||+|++..+.++++.-. +...+.+. + ..+.+..|..++|++++ +|+.+
T Consensus 19 v~vy~~~~Cp~C~~ak~~L~~~~i~------~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi-~g~~i 81 (114)
T 3h8q_A 19 VVIFSKSYCPHSTRVKELFSSLGVE------CNVLELDQVDDGARVQEVLSEITNQKTVPNIFV-NKVHV 81 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCC------CEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE-TTEEE
T ss_pred EEEEEcCCCCcHHHHHHHHHHcCCC------cEEEEecCCCChHHHHHHHHHHhCCCccCEEEE-CCEEE
Confidence 5559999999999999999886322 22233332 2 23667789999999865 77543
No 320
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=97.44 E-value=0.00045 Score=57.53 Aligned_cols=32 Identities=13% Similarity=0.326 Sum_probs=28.7
Q ss_pred CCeEEEEEEcCCChHHHhhhHHH-HHHHHHcCC
Q 021221 81 HEYVAVLFYASWCPFSRNFRPSF-SVLSSLYSS 112 (316)
Q Consensus 81 ~~~vlV~Fya~WC~~Ck~~~p~~-~~la~~~~~ 112 (316)
.++++|+||..+||+|..+.+.+ .++.+.+++
T Consensus 17 ~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~ 49 (195)
T 3c7m_A 17 ADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKD 49 (195)
T ss_dssp CTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTT
T ss_pred CCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCC
Confidence 46789999999999999999999 999988875
No 321
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=97.44 E-value=2.4e-05 Score=60.69 Aligned_cols=51 Identities=16% Similarity=0.149 Sum_probs=43.0
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH---------------HHHhHHhhhhhHhHhhcccee
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV---------------LLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~---------------~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
+.+++.| ++ +||++|+.+ .|.+..++..|. +.+++|.++||+.++.+|..+
T Consensus 37 ~~~vv~f-~~--~~C~~C~~~--~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 102 (130)
T 1wmj_A 37 KVVIIDF-TA--SWCGPCRFI--APVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEA 102 (130)
T ss_dssp CBCBEEC-CS--SSCSCSSSS--HHHHHHHHHHCTTBCCEECCTTTSGGGHHHHTCCSSCCCCBCTTTTCC
T ss_pred CEEEEEE-EC--CCChhHHHH--HHHHHHHHHHCCCCEEEEEeccchHHHHHHcCCCccceEEEEeCCeEE
Confidence 3467778 89 999999999 999999998862 488999999999999887643
No 322
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.43 E-value=4.6e-06 Score=66.16 Aligned_cols=50 Identities=14% Similarity=-0.020 Sum_probs=43.4
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHHHH------------HHhHHhhhhhHhHhhcccee
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAFVL------------LRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~------------~~~~i~~~Ptl~~~~~~~~~ 241 (316)
.+++.| ++ |||++|+.+ .|.+..+|..|.. .+|+|.++||+.+|.+|..+
T Consensus 32 ~vvv~f-~a--~wC~~C~~~--~p~l~~la~~~~~v~~~~vd~~~~~~~~~i~~~Pt~~~~~~G~~v 93 (135)
T 2dbc_A 32 WVVIHL-YR--SSVPMCLVV--NQHLSVLARKFPETKFVKAIVNSCIEHYHDNCLPTIFVYKNGQIE 93 (135)
T ss_dssp EEEEEE-CC--TTCHHHHHH--HHHHHHHHHHCSSEEEEEECCSSSCSSCCSSCCSEEEEESSSSCS
T ss_pred EEEEEE-EC--CCChHHHHH--HHHHHHHHHHCCCcEEEEEEhhcCcccCCCCCCCEEEEEECCEEE
Confidence 467888 99 999999999 9999999998731 67999999999999988754
No 323
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=97.43 E-value=6.7e-06 Score=65.89 Aligned_cols=51 Identities=10% Similarity=0.017 Sum_probs=44.2
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhcccee
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
+.+++.| ++ |||++|+.+ .|.+++++..+. +.+|+|.++||+.+|.+|.-+
T Consensus 24 k~vlv~F-~a--~wC~~C~~~--~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~~v 90 (142)
T 1qgv_A 24 RVVVIRF-GH--DWDPTCMKM--DEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHI 90 (142)
T ss_dssp SEEEEEE-EC--TTSHHHHHH--HHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTEEE
T ss_pred CEEEEEE-EC--CCCHHHHHH--HHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEEEEEECCcEE
Confidence 4477888 99 999999999 999999999883 278999999999999888754
No 324
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.43 E-value=1.2e-05 Score=62.00 Aligned_cols=51 Identities=12% Similarity=0.070 Sum_probs=42.9
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccce
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
.+.+++.| ++ +||++|+.+ .|.+..++..+. +.+|+|.++||+.+|.+|..
T Consensus 31 ~k~vlv~f-~a--~~C~~C~~~--~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~ 97 (119)
T 1w4v_A 31 ETPVVVDF-HA--QWCGPCKIL--GPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAMKNGDV 97 (119)
T ss_dssp SSCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSSSEEEEEETTEE
T ss_pred CCcEEEEE-EC--CCCHHHHHH--HHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcccEEEEEeCCcE
Confidence 34467788 99 999999999 999999988762 47899999999999977764
No 325
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=97.43 E-value=1.1e-05 Score=62.51 Aligned_cols=51 Identities=10% Similarity=0.083 Sum_probs=42.4
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH-----------------HHHhHHhhhhhHhHhhcccee
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV-----------------LLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~-----------------~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
+.+++.| ++ +||++|+.+ .|.+..++..|. +.+|+|.++||+.+|.+|..+
T Consensus 34 k~vvv~f-~a--~~C~~C~~~--~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt~~~~~~G~~~ 101 (121)
T 2j23_A 34 KVVVIDF-WA--TWCGPCKMI--GPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFVFFKNGQKI 101 (121)
T ss_dssp SCEEEEE-EC--TTCSTHHHH--HHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSEEEEEETTEEE
T ss_pred CEEEEEE-EC--CCCHhHHHH--HHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccEEEEEECCeEE
Confidence 3467778 99 999999999 999999887653 378999999999999877643
No 326
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.43 E-value=0.00066 Score=59.40 Aligned_cols=83 Identities=11% Similarity=0.038 Sum_probs=67.0
Q ss_pred CCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEEe--------CceeEEEe-
Q 021221 81 HEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLN--------SSMRVRYH- 151 (316)
Q Consensus 81 ~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~~--------g~~~~~~~- 151 (316)
++.++|-|++++| ....+.|.++|+.+.+...++.. .+.+++++|++++ |++++|+ ......|.
T Consensus 25 ~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~~~F~~t---~~~~v~~~~~v~~-p~ivlfk~~~~~~kfde~~~~y~g 97 (250)
T 3ec3_A 25 DDVVILGVFQGVG---DPGYLQYQDAANTLREDYKFHHT---FSTEIAKFLKVSL-GKLVLMQPEKFQSKYEPRMHVMDV 97 (250)
T ss_dssp SSCEEEEECSCTT---CHHHHHHHHHHHHHTTTCCEEEE---CCHHHHHHHTCCS-SEEEEECCGGGCCTTSCSCEEEEC
T ss_pred CCeEEEEEEcCCC---chHHHHHHHHHHhhhcCcEEEEE---CcHHHHHHcCCCC-CeEEEEecchhhccccccceeccC
Confidence 6889999999985 57788999999998665556654 2478999999998 9999993 24457888
Q ss_pred -CCCCHHHHHHHHHHhhCCC
Q 021221 152 -GSRTLDSLVAFYSDVTASL 170 (316)
Q Consensus 152 -G~~~~~~l~~fi~~~~~~~ 170 (316)
|..+.++|.+||..+.-+.
T Consensus 98 ~~~~~~~~l~~fi~~~~~Pl 117 (250)
T 3ec3_A 98 QGSTEASAIKDYVVKHALPL 117 (250)
T ss_dssp CTTSCHHHHHHHHHHHSSCT
T ss_pred CCCCCHHHHHHHHHHcCCCc
Confidence 4789999999999987644
No 327
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.42 E-value=2.7e-05 Score=58.89 Aligned_cols=51 Identities=12% Similarity=0.024 Sum_probs=43.5
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccce
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
...+++.| ++ +||++|+.+ .|.+..++..+. +.+|+|.++||+.+|.+|..
T Consensus 25 ~~~~lv~f-~~--~~C~~C~~~--~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~ 91 (115)
T 1thx_A 25 EQPVLVYF-WA--SWCGPCQLM--SPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPALRLVKGEQI 91 (115)
T ss_dssp SSCEEEEE-EC--TTCTTHHHH--HHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSSSEEEEEETTEE
T ss_pred CceEEEEE-EC--CCCHHHHHh--HHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCceeEEEEEcCCEE
Confidence 44567788 99 999999999 999999998873 48899999999999977764
No 328
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.40 E-value=1.3e-05 Score=62.01 Aligned_cols=51 Identities=18% Similarity=0.221 Sum_probs=43.1
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhcccee
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
+.+++.| ++ +||++|+++ .|.+..++..|. +.+++|.++||+.++.+|..+
T Consensus 38 ~~~vv~f-~a--~wC~~C~~~--~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 104 (124)
T 1faa_A 38 KPVVLDM-FT--QWCGPCKAM--APKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVV 104 (124)
T ss_dssp SCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCSSSSEEEEEETTEEE
T ss_pred CEEEEEE-EC--CcCHhHHHH--hHHHHHHHHHCCCCEEEEEecCcchHHHHHHcCCCeeeEEEEEeCCcEE
Confidence 3467788 99 999999999 999999998762 378999999999998888743
No 329
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=97.40 E-value=5.6e-06 Score=63.47 Aligned_cols=50 Identities=8% Similarity=0.119 Sum_probs=42.3
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHH--------------HHHHhHHhhhhhHhHhhcccee
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAF--------------VLLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f--------------~~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
.+++.| ++ +||++|+.+ .|.+..++..| ++.+++|.++||+.++.+|..+
T Consensus 35 ~~vv~f-~a--~wC~~C~~~--~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 98 (117)
T 2xc2_A 35 LVVVDF-FA--TWCGPCKTI--APLFKELSEKYDAIFVKVDVDKLEETARKYNISAMPTFIAIKNGEKV 98 (117)
T ss_dssp CEEEEE-EC--TTCHHHHHH--HHHHHHHHTTSSSEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred EEEEEE-EC--CCCHhHHHH--hHHHHHHHHHcCcEEEEEECCccHHHHHHcCCCccceEEEEeCCcEE
Confidence 367778 99 999999999 99999998764 3488999999999999877643
No 330
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.40 E-value=1.8e-05 Score=67.45 Aligned_cols=51 Identities=14% Similarity=-0.024 Sum_probs=44.1
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHH----------------HHHHhHHhhhhhHhHhhccce
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f----------------~~~~~~i~~~Ptl~~~~~~~~ 240 (316)
...+++.| ++ |||++|+.+ .|.+..++..+ ++.+++|.++||+.+|.+|..
T Consensus 114 ~~~vlv~F-~a--~wC~~C~~~--~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~ 180 (210)
T 3apq_A 114 GELWFVNF-YS--PGCSHCHDL--APTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIFRSGMA 180 (210)
T ss_dssp SCCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEECTTSC
T ss_pred CCcEEEEE-eC--CCChhHHHH--HHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCcCCeEEEEECCCc
Confidence 44578888 99 999999999 99999999876 348999999999999988763
No 331
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.40 E-value=4.6e-06 Score=63.60 Aligned_cols=49 Identities=18% Similarity=0.103 Sum_probs=42.3
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH-------------------HHHhHHhhhhhHhHhhccc
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV-------------------LLRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~-------------------~~~~~i~~~Ptl~~~~~~~ 239 (316)
+.+++.| ++ +||++|+++ .|.+..++..+. +.+++|.++||+.+|.+|.
T Consensus 25 ~~~lv~f-~~--~~C~~C~~~--~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~ 92 (120)
T 1mek_A 25 KYLLVEF-YA--PWCGHCKAL--APEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGD 92 (120)
T ss_dssp SEEEEEE-EC--SSCSTTSTT--HHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSEEEEEESSC
T ss_pred CeEEEEE-EC--CCCHHHHHh--hHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccEEEEEeCCC
Confidence 3467888 99 999999999 999999998752 3889999999999997776
No 332
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=97.40 E-value=1.1e-05 Score=62.89 Aligned_cols=50 Identities=14% Similarity=0.161 Sum_probs=42.6
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHH---------------HHHHhHHhhhhhHhHhhcccee
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f---------------~~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
.+++.| ++ +||++|+.+ .|.+..++..| ++.+|+|.++||+.++.+|..+
T Consensus 40 ~vvv~f-~a--~wC~~C~~~--~~~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~ 104 (124)
T 1xfl_A 40 LVVVDF-TA--SWCGPCRFI--APFFADLAKKLPNVLFLKVDTDELKSVASDWAIQAMPTFMFLKEGKIL 104 (124)
T ss_dssp EEEEEE-EC--TTCHHHHHH--HHHHHHHHHHCSSEEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred EEEEEE-EC--CCCHHHHHH--HHHHHHHHHHCCCcEEEEEECccCHHHHHHcCCCccCEEEEEECCEEE
Confidence 366778 99 999999999 99999999875 3488999999999999887644
No 333
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.39 E-value=1.5e-05 Score=59.72 Aligned_cols=51 Identities=14% Similarity=0.121 Sum_probs=43.6
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccce
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
.+.+++.| ++ +||++|+.+ .|.+..++..+. +.+++|.++||+.+|.+|..
T Consensus 20 ~~~~~v~f-~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~ 86 (108)
T 2trx_A 20 DGAILVDF-WA--EWCGPCKMI--APILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEV 86 (108)
T ss_dssp SSEEEEEE-EC--TTCHHHHHH--HHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSSEEEEEETTEE
T ss_pred CCeEEEEE-EC--CCCHhHHHH--HHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccCEEEEEeCCEE
Confidence 34577888 99 999999999 999999998873 38899999999999977764
No 334
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=97.39 E-value=6.9e-06 Score=62.54 Aligned_cols=45 Identities=16% Similarity=0.093 Sum_probs=37.7
Q ss_pred CCccccccCCcccCChhhhhchHHHHHHHHHH----------------HHHHhHHhhhhhHhHhhccc
Q 021221 188 NNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 188 ~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f----------------~~~~~~i~~~Ptl~~~~~~~ 239 (316)
.++.| ++ |||++|+++ .|.|..+|..| ++.+|+|.++||+.+ +|.
T Consensus 15 ~vV~F-~A--~WC~~C~~~--~p~~~~~a~~~~~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~ 75 (106)
T 3kp8_A 15 GGTMY-GA--YWCPHCQDQ--KELFGAAFDQVPYVECSPNGPGTPQAQECTEAGITSYPTWII--NGR 75 (106)
T ss_dssp TCEEE-EC--TTCHHHHHH--HHHHGGGGGGSCEEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTE
T ss_pred EEEEE-EC--CCCHHHHHH--HHHHHHHHHhCCEEEEecccccchhHHHHHHcCCeEeCEEEE--CCE
Confidence 56788 99 999999999 99999998654 457899999999776 554
No 335
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=97.38 E-value=1.6e-05 Score=61.21 Aligned_cols=50 Identities=16% Similarity=0.214 Sum_probs=42.5
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHHH---------------HHHhHHhhhhhHhHhhcccee
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAFV---------------LLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~---------------~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
.+++.| ++ +||++|+.+ .|.+..++..|. +.+|+|.++||+.++.+|..+
T Consensus 36 ~~vv~f-~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 100 (122)
T 2vlu_A 36 LVVIDF-TA--SWCGPCRIM--APVFADLAKKFPNAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVK 100 (122)
T ss_dssp CEEEEE-EC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred EEEEEE-EC--CCCHHHHHH--HHHHHHHHHHCCCcEEEEEECCCCHHHHHHcCCCcccEEEEEeCCEEE
Confidence 367778 89 999999999 999999998762 488999999999999877643
No 336
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=97.38 E-value=2.2e-05 Score=60.39 Aligned_cols=50 Identities=12% Similarity=0.159 Sum_probs=43.3
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccc
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~ 239 (316)
.+.+++.| ++ |||++|+.+ .|.+..++..+. +.+++|.++||+.+|.+|.
T Consensus 21 ~~~~lv~f-~a--~~C~~C~~~--~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~~ 86 (122)
T 3aps_A 21 KTHWVVDF-YA--PWCGPCQNF--APEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYER 86 (122)
T ss_dssp SSCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEEG
T ss_pred CCeEEEEE-EC--CCCHHHHHH--HHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccceEEEEeCCC
Confidence 44577888 99 999999999 999999998873 3889999999999997765
No 337
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.37 E-value=1.4e-05 Score=59.71 Aligned_cols=50 Identities=14% Similarity=0.125 Sum_probs=42.7
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccce
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
+.+++.| ++ |||++|+.+ .|.+..++..+. +.+++|.++||+.++.+|..
T Consensus 18 ~~~~v~f-~~--~~C~~C~~~--~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~ 83 (105)
T 1nsw_A 18 GPVLVDF-WA--AWCGPCRMM--APVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGRP 83 (105)
T ss_dssp SCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEE
T ss_pred CcEEEEE-EC--CCCHHHHHH--HHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccccEEEEEeCCeE
Confidence 4567888 99 999999999 999999998762 48899999999999977763
No 338
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=97.37 E-value=1.5e-05 Score=61.16 Aligned_cols=49 Identities=16% Similarity=0.185 Sum_probs=41.2
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHHH-------------------HHhHHhhhhhHhHhhccc
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFVL-------------------LRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~-------------------~~~~i~~~Ptl~~~~~~~ 239 (316)
...+++.| ++ |||++|+++ .|.+.+++..|.. .+ +|.++||+.+|.+|.
T Consensus 25 ~~~vlv~f-~a--~wC~~C~~~--~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~-~v~~~Pt~~~~~~~~ 92 (121)
T 2djj_A 25 TKDVLIEF-YA--PWCGHCKAL--APKYEELGALYAKSEFKDRVVIAKVDATANDVPD-EIQGFPTIKLYPAGA 92 (121)
T ss_dssp TSCEEEEE-EC--SSCTTHHHH--HHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCSS-CCSSSSEEEEECSSC
T ss_pred CCCEEEEE-EC--CCCHhHHHh--hHHHHHHHHHHhhcccCCceEEEEEECccccccc-ccCcCCeEEEEeCcC
Confidence 45578888 99 999999999 9999999988741 23 788999999998874
No 339
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=97.37 E-value=2.3e-05 Score=59.13 Aligned_cols=51 Identities=16% Similarity=0.189 Sum_probs=42.8
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHH---------------HHHHhHHhhhhhHhHhhccceeh
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFTWRR 242 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f---------------~~~~~~i~~~Ptl~~~~~~~~~~ 242 (316)
.+++.| ++ +||++|+.+ .|.+..++..| ++.+++|.++||+.++.+|..+.
T Consensus 28 ~~vv~f-~~--~~C~~C~~~--~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~ 93 (113)
T 1ti3_A 28 LIVVDF-TA--SWCPPCKMI--APIFAELAKKFPNVTFLKVDVDELKAVAEEWNVEAMPTFIFLKDGKLVD 93 (113)
T ss_dssp EEEEEE-EC--SSCHHHHHH--HHHHHHHHHHCSSEEEEEEETTTCHHHHHHHHCSSTTEEEEEETTEEEE
T ss_pred eEEEEE-EC--CCCHHHHHH--HHHHHHHHHhCCCcEEEEEEccccHHHHHhCCCCcccEEEEEeCCEEEE
Confidence 356777 99 999999999 99999998875 34889999999999998877543
No 340
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.35 E-value=2e-05 Score=59.55 Aligned_cols=51 Identities=14% Similarity=0.186 Sum_probs=43.4
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccce
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
.+.+++.| ++ +||++|+.+ .|.+..++..+. +.+|+|.++||+.++.+|..
T Consensus 23 ~~~~vv~f-~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~ 89 (112)
T 1t00_A 23 DKPVLVDF-WA--AWCGPCRQI--APSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVYQGGEV 89 (112)
T ss_dssp SSCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEE
T ss_pred CCeEEEEE-EC--CCCHhHHhc--CHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcccEEEEEeCCEE
Confidence 34567888 99 999999999 999999998872 48899999999999987764
No 341
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.35 E-value=1.2e-05 Score=60.00 Aligned_cols=49 Identities=12% Similarity=0.193 Sum_probs=42.3
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHH----------------HHHHhHHhhhhhHhHhhccce
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f----------------~~~~~~i~~~Ptl~~~~~~~~ 240 (316)
.+++.| ++ +||++|+.+ .|.+..++..+ ++.+++|.++||+.++.+|..
T Consensus 22 ~~vv~f-~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~ 86 (106)
T 1xwb_A 22 LVVLDF-FA--TWCGPCKMI--SPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFLKNGVK 86 (106)
T ss_dssp EEEEEE-EC--TTCHHHHHH--HHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEE
T ss_pred EEEEEE-EC--CcCHHHHHh--hHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccEEEEEcCCcE
Confidence 366777 99 999999999 99999999887 248899999999999988764
No 342
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=97.35 E-value=1.9e-05 Score=62.42 Aligned_cols=50 Identities=12% Similarity=0.162 Sum_probs=42.7
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHH---------------HHHHhHHhhhhhHhHhhcccee
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f---------------~~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
.+++.| ++ +||++|+.+ .|.+..++..| ++.+|+|.++||+.++.+|..+
T Consensus 48 ~vvv~f-~a--~wC~~C~~~--~~~l~~l~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 112 (139)
T 3d22_A 48 IVLANF-SA--RWCGPSRQI--APYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQV 112 (139)
T ss_dssp CEEEEE-EC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCEESEEEEEETTEEE
T ss_pred EEEEEE-EC--CCCHHHHHH--HHHHHHHHHHCCCCEEEEEeCcccHHHHHHcCCCcccEEEEEcCCeEE
Confidence 467778 99 999999999 99999999876 2488999999999999777644
No 343
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=97.34 E-value=1.4e-05 Score=68.83 Aligned_cols=52 Identities=13% Similarity=0.115 Sum_probs=45.3
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhcccee
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
.+.+++.| ++ |||++|+.+ .|.+..++..|. +.+|+|.++||+.++.+|..+
T Consensus 30 ~k~vvv~F-~a--~wC~~C~~~--~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~ 97 (222)
T 3dxb_A 30 DGAILVDF-WA--EWCGPCKMI--APILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVA 97 (222)
T ss_dssp SSCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSBSEEEEEETTEEE
T ss_pred CCEEEEEE-EC--CcCHHHHHH--HHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcCCEEEEEECCeEE
Confidence 45578888 99 999999999 999999999874 389999999999999887643
No 344
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.34 E-value=1.9e-05 Score=60.10 Aligned_cols=50 Identities=14% Similarity=0.107 Sum_probs=42.3
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHHH---------------HHHhHHhhhhhHhHhhcccee
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAFV---------------LLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~---------------~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
.+++.| ++ +||++|+.+ .|.+..++..|- +.+|+|.++||+.++.+|..+
T Consensus 30 ~~vv~f-~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 94 (118)
T 2vm1_A 30 LVIIDF-TA--SWCGPCRVI--APVFAEYAKKFPGAIFLKVDVDELKDVAEAYNVEAMPTFLFIKDGEKV 94 (118)
T ss_dssp CEEEEE-EC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSBSEEEEEETTEEE
T ss_pred EEEEEE-EC--CCCHhHHHH--hHHHHHHHHHCCCcEEEEEEcccCHHHHHHcCCCcCcEEEEEeCCeEE
Confidence 366777 89 999999999 999999998762 478999999999999877643
No 345
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.33 E-value=0.0012 Score=61.35 Aligned_cols=93 Identities=10% Similarity=-0.058 Sum_probs=71.7
Q ss_pred cCCCeEEEEEEcCCCh-HHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCC--ccceEEEEeCceeEEEe---C
Q 021221 79 NSHEYVAVLFYASWCP-FSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVH--GFPTLFLLNSSMRVRYH---G 152 (316)
Q Consensus 79 ~~~~~vlV~Fya~WC~-~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~--~~Pti~l~~g~~~~~~~---G 152 (316)
..+.+++|.|+.++|. .|+.+...+.+++..+.+...+...|++..+.+++.+|+. .+|++++++.+....|. +
T Consensus 234 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~id~~~~~~~~~~~gl~~~~~P~i~i~~~~~~y~~~~~~~ 313 (382)
T 2r2j_A 234 EEGLPFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHADCDKFRHPLLHIQKTPADCPVIAIDSFRHMYVFGDFKD 313 (382)
T ss_dssp TTCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTTTSEEEEEETTTTHHHHHHTTCCGGGCSEEEEECSSCEEECCCSGG
T ss_pred cCCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCCeeEEEEEchHHhHHHHHHcCCCccCCCEEEEEcchhcCCCCcccc
Confidence 4678999999999984 4666777777777778877778888888888899999998 68999988543333332 3
Q ss_pred CCCHHHHHHHHHHhhCCCC
Q 021221 153 SRTLDSLVAFYSDVTASLD 171 (316)
Q Consensus 153 ~~~~~~l~~fi~~~~~~~~ 171 (316)
..+.++|.+|+++....+.
T Consensus 314 ~~~~~~i~~F~~d~~~Gkl 332 (382)
T 2r2j_A 314 VLIPGKLKQFVFDLHSGKL 332 (382)
T ss_dssp GGSTTHHHHHHHHHHHTTT
T ss_pred ccCHHHHHHHHHHHHCCCc
Confidence 4467999999999887543
No 346
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=97.33 E-value=9e-06 Score=60.20 Aligned_cols=50 Identities=18% Similarity=0.178 Sum_probs=42.6
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHH---------------HHHHhHHhhhhhHhHhhccce
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f---------------~~~~~~i~~~Ptl~~~~~~~~ 240 (316)
+.+++.| ++ +||++|+.+ .|.+..++..+ ++.++++.++||+.++.+|..
T Consensus 17 ~~~~v~f-~~--~~C~~C~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 81 (104)
T 2e0q_A 17 EIAVVDF-WA--EWCAPCLIL--APIIEELAEDYPQVGFGKLNSDENPDIAARYGVMSLPTVIFFKDGEP 81 (104)
T ss_dssp SEEEEEE-EC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSCEEEEEETTEE
T ss_pred CcEEEEE-EC--CCChhHHHH--hHHHHHHHHHcCCceEEEEECCCCHHHHHhCCccccCEEEEEECCeE
Confidence 4467788 89 999999999 99999998876 348899999999999977764
No 347
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.33 E-value=1.6e-05 Score=59.76 Aligned_cols=50 Identities=18% Similarity=0.136 Sum_probs=43.0
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHH-------------------HHHHhHHhhhhhHhHhhccce
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAF-------------------VLLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f-------------------~~~~~~i~~~Ptl~~~~~~~~ 240 (316)
+.+++.| ++ +||++|+++ .|.+..++..+ ++.+++|.++||+.+|.+|..
T Consensus 22 ~~~lv~f-~~--~~C~~C~~~--~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~ 90 (111)
T 3uvt_A 22 GITFIKF-YA--PWCGHCKTL--APTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLLLFRGGKK 90 (111)
T ss_dssp SEEEEEE-EC--SSCHHHHHH--HHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEE
T ss_pred CcEEEEE-EC--CCChhHHHh--hHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEEEEEeCCcE
Confidence 3467888 99 999999999 99999999864 248999999999999988764
No 348
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=97.33 E-value=1.5e-05 Score=69.95 Aligned_cols=51 Identities=18% Similarity=0.167 Sum_probs=43.9
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHHH--------------HHhHHhhhhhHhHhhcccee
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFVL--------------LRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~--------------~~~~i~~~Ptl~~~~~~~~~ 241 (316)
..+++.| |+ |||++|+.+ .|.|..||..|.. .+|+|.++||+++|.+|..+
T Consensus 134 k~VvV~F-ya--~wC~~Ck~l--~p~l~~La~~~~~v~f~kVd~d~~~l~~~~~I~~~PTll~~~~G~~v 198 (245)
T 1a0r_P 134 TTIVVHI-YE--DGIKGCDAL--NSSLICLAAEYPMVKFCKIKASNTGAGDRFSSDVLPTLLVYKGGELL 198 (245)
T ss_dssp CEEEEEE-EC--TTSTTHHHH--HHHHHHHHHHCTTSEEEEEEHHHHCCTTSSCTTTCSEEEEEETTEEE
T ss_pred CEEEEEE-EC--CCChHHHHH--HHHHHHHHHHCCCCEEEEEeCCcHHHHHHCCCCCCCEEEEEECCEEE
Confidence 3477888 99 999999999 9999999998731 47999999999999988754
No 349
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.32 E-value=3.6e-05 Score=57.51 Aligned_cols=51 Identities=10% Similarity=0.056 Sum_probs=43.1
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccce
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
++.+++.| ++ +||++|+.+ .|.+..++..+. +.+++|.++||+.++.+|..
T Consensus 19 ~~~~lv~f-~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~ 85 (107)
T 1dby_A 19 SVPVLVDF-WA--PWCGPCRII--APVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKK 85 (107)
T ss_dssp SSCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSCEEEEESSSSE
T ss_pred CCcEEEEE-EC--CCCHhHHHH--HHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCCEEEEEeCCEE
Confidence 34467788 99 999999999 999999998763 37899999999999987764
No 350
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.32 E-value=1.3e-05 Score=62.78 Aligned_cols=51 Identities=14% Similarity=0.143 Sum_probs=43.6
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccce
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
.+.+++.| ++ +||++|+.+ .|.+..++..|. +.+|+|.++||+.+|.+|..
T Consensus 40 ~k~vlv~F-~a--~wC~~C~~~--~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~ 106 (128)
T 2o8v_B 40 DGAILVDF-WA--EWCGPAKMI--APILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEV 106 (128)
T ss_dssp SSEEEEEE-EC--SSCHHHHHT--HHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSSSEEEEEETTEE
T ss_pred CCEEEEEE-EC--CCCHHHHHH--hHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEEEeCCEE
Confidence 44577888 99 999999999 999999998873 27899999999999977764
No 351
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.29 E-value=1.9e-05 Score=58.67 Aligned_cols=51 Identities=14% Similarity=0.127 Sum_probs=42.7
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHH---------------HHHHhHHhhhhhHhHhhcccee
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f---------------~~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
+.+++.| ++ +||++|+.+ .|.+..++..+ ++.+++|.++||+.++.+|..+
T Consensus 20 ~~~~v~f-~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 85 (104)
T 2vim_A 20 RLIVVDF-FA--QWCGPCRNI--APKVEALAKEIPEVEFAKVDVDQNEEAAAKYSVTAMPTFVFIKDGKEV 85 (104)
T ss_dssp SCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CeEEEEE-EC--CCCHHHHHh--hHHHHHHHHHCCCCEEEEEeccCCHHHHHHcCCccccEEEEEeCCcEE
Confidence 3466777 89 999999999 99999998876 2488999999999999877643
No 352
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=97.28 E-value=6.8e-06 Score=62.52 Aligned_cols=51 Identities=10% Similarity=0.126 Sum_probs=43.0
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHH---------------HHHHhHHhhhhhHhHhhcccee
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f---------------~~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
+.+++.| ++ +||++|+.+ .|.+..++..+ ++.+++|.++||+.++.+|..+
T Consensus 27 k~vlv~f-~a--~~C~~C~~~--~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 92 (112)
T 1syr_A 27 ELVIVDF-FA--EWCGPCKRI--APFYEECSKTYTKMVFIKVDVDEVSEVTEKENITSMPTFKVYKNGSSV 92 (112)
T ss_dssp SEEEEEE-EC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEETTTTHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CeEEEEE-EC--CCCHHHHHH--HHHHHHHHHHcCCCEEEEEECCCCHHHHHHcCCCcccEEEEEECCcEE
Confidence 3467778 99 999999999 99999998876 3488999999999999887643
No 353
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.27 E-value=2.6e-05 Score=55.67 Aligned_cols=46 Identities=11% Similarity=-0.066 Sum_probs=38.3
Q ss_pred CCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccce
Q 021221 188 NNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 188 ~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
.++.| ++ |||++|+++ .|.+..++..+. ..+++|.++||+.+ +|..
T Consensus 4 ~vv~f-~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~ 65 (85)
T 1nho_A 4 NIEVF-TS--PTCPYCPMA--IEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV 65 (85)
T ss_dssp CEEEE-SC--SSSCCSTTH--HHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE
T ss_pred EEEEE-EC--CCCcchHHH--HHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE
Confidence 35567 88 999999999 999999998773 27899999999988 6663
No 354
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.26 E-value=0.00056 Score=51.94 Aligned_cols=56 Identities=13% Similarity=0.285 Sum_probs=38.3
Q ss_pred EEEEEc-----CCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCCh----hhHhhcCCCccceEEEEeCcee
Q 021221 85 AVLFYA-----SWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRP----SILSKYGVHGFPTLFLLNSSMR 147 (316)
Q Consensus 85 lV~Fya-----~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~----~l~~~~~I~~~Pti~l~~g~~~ 147 (316)
++.|+. +|||+|++..+.+++. ++. +...|.+.++ .+.+.+|..++|+++ ++|+.+
T Consensus 17 vvvy~~g~~~~~~Cp~C~~ak~~L~~~-----~i~-~~~vdi~~~~~~~~~l~~~~g~~~vP~if-i~g~~i 81 (109)
T 1wik_A 17 VMLFMKGNKQEAKCGFSKQILEILNST-----GVE-YETFDILEDEEVRQGLKTFSNWPTYPQLY-VRGDLV 81 (109)
T ss_dssp EEEEESSTTTCCCSSTHHHHHHHHHHT-----CSC-EEEEESSSCHHHHHHHHHHHSCCSSCEEE-CSSSEE
T ss_pred EEEEEecCCCCCCCchHHHHHHHHHHc-----CCC-eEEEECCCCHHHHHHHHHHhCCCCCCEEE-ECCEEE
Confidence 445666 9999999999999875 333 3444555554 355667899999853 377643
No 355
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.26 E-value=2.4e-05 Score=58.17 Aligned_cols=52 Identities=15% Similarity=0.154 Sum_probs=43.5
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhcccee
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
++.+++.| ++ +||++|+.+ .|.+..++..+. +.+++|.++||+.++.+|..+
T Consensus 18 ~~~~~v~f-~~--~~C~~C~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 85 (105)
T 1fb6_A 18 EVPVMVDF-WA--PWCGPCKLI--APVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERK 85 (105)
T ss_dssp SSCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CCcEEEEE-EC--CCChHHHHH--HHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccEEEEEeCCeEE
Confidence 34567788 99 999999999 999999998763 488999999999999877643
No 356
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=97.25 E-value=5.1e-05 Score=61.58 Aligned_cols=53 Identities=13% Similarity=0.154 Sum_probs=39.7
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHH-------HH-----------HHHhHHhhhhhHhHhh-ccceeh
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATA-------FV-----------LLRLVYIFLPTLLIFA-QFTWRR 242 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~-------f~-----------~~~~~i~~~Ptl~~~~-~~~~~~ 242 (316)
.+.+++.| ++ +||++|+.+ .|.+...+.. |+ ..++++.++||+.+|. +|..+.
T Consensus 44 ~KpVlV~F-~A--~WC~~Ck~m--~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~v~ 115 (151)
T 3ph9_A 44 KKPLMVIH-HL--EDCQYSQAL--KKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLTVRA 115 (151)
T ss_dssp TCCEEEEE-CC--TTCHHHHHH--HHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCTTCCCSSEEEEECTTSCBCT
T ss_pred CCcEEEEE-EC--CCCHhHHHH--HHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhcCCCCCCEEEEECCCCCEEE
Confidence 45578899 99 999999999 8887754321 21 1567889999999997 776544
No 357
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=96.33 E-value=4.5e-05 Score=59.36 Aligned_cols=50 Identities=6% Similarity=-0.062 Sum_probs=38.1
Q ss_pred ccCCCccccccCCcccCChhhhhchHHH---HHHHHHH------------------HHHHhHHhhhhhHhHh--hccc
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETY---LALATAF------------------VLLRLVYIFLPTLLIF--AQFT 239 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~---~~lA~~f------------------~~~~~~i~~~Ptl~~~--~~~~ 239 (316)
.+.+++.| ++ |||++|+.+ .|.+ ..++..+ ++.+|+|.++||+.++ .+|.
T Consensus 19 ~k~vlv~f-~a--~wC~~C~~~--~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~ 91 (130)
T 2lst_A 19 GRMVMVYF-HS--EHCPYCQQM--NTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGA 91 (130)
Confidence 34577888 99 999999999 7777 5655443 1378999999999999 3454
No 358
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.21 E-value=3.9e-05 Score=57.16 Aligned_cols=51 Identities=10% Similarity=0.053 Sum_probs=43.6
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccce
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
.+.+++.| ++ |||++|+.+ .|.+..++..|. +.+++|.++||+.+|.+|..
T Consensus 20 ~~~~lv~f-~~--~~C~~C~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~ 86 (107)
T 2i4a_A 20 SGLVLVDF-WA--EWCGPCKMI--GPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLMLVRDGKV 86 (107)
T ss_dssp SSEEEEEE-EC--TTCHHHHHH--HHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTEE
T ss_pred CCEEEEEE-EC--CCChhHHHH--hHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccCEEEEEeCCEE
Confidence 34567788 89 999999999 999999998873 38899999999999977764
No 359
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=97.20 E-value=0.00038 Score=54.70 Aligned_cols=61 Identities=15% Similarity=0.251 Sum_probs=38.2
Q ss_pred EEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCC----ChhhHhhcCCCccceEEEEeCce
Q 021221 85 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAI----RPSILSKYGVHGFPTLFLLNSSM 146 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~----~~~l~~~~~I~~~Pti~l~~g~~ 146 (316)
++.|..+|||+|++....+++....-.....+.++..+. ...+.+..|..++|++++ +|+.
T Consensus 16 Vvvysk~~Cp~C~~ak~lL~~~~~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~IfI-~G~~ 80 (127)
T 3l4n_A 16 IIIFSKSTCSYSKGMKELLENEYQFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLLV-NGVS 80 (127)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHEEEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEE-TTEE
T ss_pred EEEEEcCCCccHHHHHHHHHHhcccCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEEE-CCEE
Confidence 788999999999999999887411111223333332111 122444568899999954 7653
No 360
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.19 E-value=1.6e-05 Score=60.87 Aligned_cols=50 Identities=12% Similarity=0.133 Sum_probs=42.4
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHH---------------HHHHhHHhhhhhHhHhhccce
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f---------------~~~~~~i~~~Ptl~~~~~~~~ 240 (316)
+.+++.| ++ |||++|+++ .|.+..++..| ++.+++|.++||+.++.+|..
T Consensus 31 k~vvv~F-~a--~wC~~C~~~--~p~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~ 95 (114)
T 2oe3_A 31 DKLVIDF-YA--TWCGPCKMM--QPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVTAMPTFVLGKDGQL 95 (114)
T ss_dssp SEEEEEE-EC--TTCHHHHHT--HHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSBSEEEEEETTEE
T ss_pred CEEEEEE-EC--CCCHHHHHH--HHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCcccEEEEEeCCeE
Confidence 3467788 99 999999999 99999998875 248899999999999877764
No 361
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=97.18 E-value=4.7e-05 Score=72.78 Aligned_cols=49 Identities=12% Similarity=0.005 Sum_probs=42.9
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH------------------------HHHhHHhhhhhHhHhhccc
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV------------------------LLRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~------------------------~~~~~i~~~Ptl~~~~~~~ 239 (316)
+.++|.| ++ |||++|+++ .|.|..++..|. +.+|+|.++||+.+|.+|.
T Consensus 43 k~VlV~F-yA--~WC~pCk~~--~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V~~~PTlilf~~gg 115 (470)
T 3qcp_A 43 CPWIVLF-YN--DGCGACRRY--ASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDINFVPRLFFFYPRD 115 (470)
T ss_dssp SCEEEEE-EC--TTCHHHHHH--HHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTCCSSCEEEEEEESS
T ss_pred CeEEEEE-EC--CCCHHHHHH--HHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCCCccCeEEEEECCC
Confidence 4578999 99 999999999 999999998762 3899999999999997654
No 362
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=97.16 E-value=2.7e-05 Score=59.98 Aligned_cols=47 Identities=13% Similarity=0.106 Sum_probs=40.7
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHH---------------HHHHhHHhhhhhHhHhhc
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQ 237 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f---------------~~~~~~i~~~Ptl~~~~~ 237 (316)
+.+++.| ++ +||++|+.+ .|.+..++..+ ++.+|+|.++||+.+|.+
T Consensus 24 ~~vlv~f-~a--~wC~~C~~~--~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~ 85 (118)
T 2f51_A 24 GLVLVDF-FA--TWCGPCQRL--GQILPSIAEANKDVTFIKVDVDKNGNAADAYGVSSIPALFFVKK 85 (118)
T ss_dssp SCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEEE
T ss_pred CEEEEEE-EC--CCCHHHHHH--HHHHHHHHHHCCCeEEEEEECCCCHHHHHhcCCCCCCEEEEEeC
Confidence 3467778 99 999999999 99999999876 248899999999999977
No 363
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=96.24 E-value=6e-05 Score=55.78 Aligned_cols=50 Identities=18% Similarity=0.192 Sum_probs=41.2
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccc
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~ 239 (316)
++.+++.| ++ +||++|+.+ .|.+..++..+. +.++++.++||+.++.+|.
T Consensus 19 ~~~~~v~f-~~--~~C~~C~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~ 84 (106)
T 2yj7_A 19 DKPVLVDF-WA--PWCGPCRMI--APIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLFKNGQ 84 (106)
Confidence 34567788 88 999999999 888888877653 2789999999999997765
No 364
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.15 E-value=5.3e-05 Score=66.31 Aligned_cols=48 Identities=13% Similarity=0.143 Sum_probs=41.1
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHH-----------------------HHHHhHHh--hhhhHhHhhccc
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAF-----------------------VLLRLVYI--FLPTLLIFAQFT 239 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f-----------------------~~~~~~i~--~~Ptl~~~~~~~ 239 (316)
...++|.| |+..|||+ + .|.|+.+|..| ++.+|+|. +|||+++|.+|.
T Consensus 22 ~~~vlV~F-yA~~pWCg----l--~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~~PTl~~f~~G~ 94 (240)
T 2qc7_A 22 SKFVLVKF-DTQYPYGE----K--QDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESYPVFYLFRDGD 94 (240)
T ss_dssp CSEEEEEE-CCSSCCSH----H--HHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGGGCSEEEEEETTC
T ss_pred CCCEEEEE-eCCCCCCc----c--hHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCCCCCEEEEEeCCC
Confidence 34588999 87669999 8 99999999887 34789999 999999999887
No 365
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=97.15 E-value=0.00031 Score=58.41 Aligned_cols=41 Identities=10% Similarity=0.123 Sum_probs=31.4
Q ss_pred CcccHHHHHhHHhccCCC-eEEEEEEcCCChHHHh-hhHHHHHHHHHcC
Q 021221 65 DEVSLQMALNMVHKNSHE-YVAVLFYASWCPFSRN-FRPSFSVLSSLYS 111 (316)
Q Consensus 65 ~~~~~~~~~~~i~~~~~~-~vlV~Fya~WC~~Ck~-~~p~~~~la~~~~ 111 (316)
+++++.++ . .++ .+|+.|++.|||.|.. ..|.|.+..++|.
T Consensus 37 ~~vsLsd~----~--~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~ 79 (176)
T 4f82_A 37 NACSVRDQ----V--AGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLR 79 (176)
T ss_dssp EEEEHHHH----H--TTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHH
T ss_pred eEEeHHHH----h--CCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHH
Confidence 45567775 1 345 5566777999999999 9999999998885
No 366
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=97.14 E-value=2.3e-05 Score=67.60 Aligned_cols=51 Identities=20% Similarity=0.105 Sum_probs=43.4
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH--------------HHHhHHhhhhhHhHhhcccee
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV--------------LLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~--------------~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
..+++.| |+ |||++|+.+ .|.|..||..|- +.+|+|.++||+.+|.+|..+
T Consensus 121 k~vvV~F-~a--~wC~~C~~l--~p~l~~la~~~~~v~f~~vd~~~~~l~~~~~i~~~PTl~~~~~G~~v 185 (217)
T 2trc_P 121 TTIVVNI-YE--DGVRGCDAL--NSSLECLAAEYPMVKFCKIRASNTGAGDRFSSDVLPTLLVYKGGELI 185 (217)
T ss_dssp CEEEEEE-EC--TTSTTHHHH--HHHHHHHHTTCTTSEEEEEEHHHHTCSTTSCGGGCSEEEEEETTEEE
T ss_pred cEEEEEE-EC--CCCccHHHH--HHHHHHHHHHCCCeEEEEEECCcHHHHHHCCCCCCCEEEEEECCEEE
Confidence 3477888 99 999999999 999999998762 257999999999999988754
No 367
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.14 E-value=4.6e-05 Score=58.29 Aligned_cols=51 Identities=16% Similarity=0.163 Sum_probs=43.4
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccce
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
...+++.| ++ +||++|+.+ .|.+..++..+. +.+++|.++||+.+|.+|..
T Consensus 30 ~~~~lv~f-~~--~~C~~C~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~ 96 (121)
T 2i1u_A 30 NKPVLVDF-WA--TWCGPCKMV--APVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQP 96 (121)
T ss_dssp SSCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEE
T ss_pred CCcEEEEE-EC--CCCHHHHHH--HHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcCCEEEEEECCEE
Confidence 44567888 99 999999999 999999998762 48899999999999987763
No 368
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.12 E-value=1.4e-05 Score=63.14 Aligned_cols=48 Identities=10% Similarity=0.133 Sum_probs=40.7
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHH--------------HHHHhHHhhhhhHhHhh--ccc
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAF--------------VLLRLVYIFLPTLLIFA--QFT 239 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f--------------~~~~~~i~~~Ptl~~~~--~~~ 239 (316)
.+++.| ++ +||++|+.+ .|.+..++..| ++.+|+|.++||+.+|. +|.
T Consensus 42 ~vvv~F-~a--~wC~~C~~~--~p~l~~l~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~g~ 105 (133)
T 3cxg_A 42 SIVIKF-GA--VWCKPCNKI--KEYFKNQLNYYYVTLVDIDVDIHPKLNDQHNIKALPTFEFYFNLNNE 105 (133)
T ss_dssp EEEEEE-EC--TTCHHHHHT--HHHHHGGGGTEECEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTE
T ss_pred EEEEEE-EC--CCCHHHHHH--HHHHHHHHHhcCEEEEEEeccchHHHHHhcCCCCCCEEEEEEecCCC
Confidence 467788 99 999999999 99999998754 34789999999999985 665
No 369
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.07 E-value=2.7e-05 Score=58.09 Aligned_cols=50 Identities=12% Similarity=0.174 Sum_probs=42.6
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccce
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
+.+++.| ++ +||++|+.+ .|.+..++..+. +.+++|.++||+.+|.+|..
T Consensus 19 ~~~lv~f-~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 84 (109)
T 2yzu_A 19 PLVLVDF-WA--EWCAPCRMI--APILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIPTVILFKDGQP 84 (109)
T ss_dssp SEEEEEE-EC--TTCHHHHHH--HHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEE
T ss_pred CeEEEEE-EC--CCCHHHHHh--hHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCCEEEEEeCCcE
Confidence 4467788 89 999999999 999999998763 48899999999999977763
No 370
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.05 E-value=3.5e-05 Score=55.01 Aligned_cols=45 Identities=9% Similarity=0.001 Sum_probs=37.7
Q ss_pred CccccccCCcccCChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhHhhccce
Q 021221 189 NTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 189 ~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
++.| ++ +||++|+++ .|.+..++..+. ..++++.++||+.+ +|..
T Consensus 6 vv~f-~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~ 66 (85)
T 1fo5_A 6 IELF-TS--PMCPHCPAA--KRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV 66 (85)
T ss_dssp EEEE-EC--CCSSCCCTH--HHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE
T ss_pred EEEE-eC--CCCCchHHH--HHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE
Confidence 4566 88 999999999 999999998763 27899999999988 6653
No 371
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.05 E-value=0.00017 Score=55.74 Aligned_cols=51 Identities=6% Similarity=-0.098 Sum_probs=42.7
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHH------------------HHHHhHHhhhhhHhHhh-ccce
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAF------------------VLLRLVYIFLPTLLIFA-QFTW 240 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f------------------~~~~~~i~~~Ptl~~~~-~~~~ 240 (316)
.+.+++.| ++ +||++|+.+ .|.+..++..| ++.+|+|.++||+.++. +|..
T Consensus 26 ~k~~lv~f-~a--~wC~~C~~~--~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~ 95 (126)
T 2l57_A 26 GIPTIIMF-KT--DTCPYCVEM--QKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNK 95 (126)
T ss_dssp SSCEEEEE-EC--SSCHHHHHH--HHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCE
T ss_pred CCcEEEEE-EC--CCCccHHHH--HHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCE
Confidence 44577888 99 999999999 99999998876 23789999999999998 6663
No 372
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=97.02 E-value=0.00011 Score=51.51 Aligned_cols=44 Identities=11% Similarity=0.010 Sum_probs=37.2
Q ss_pred ccccccCCcccCChhhhhchHHHHHHHHHHH-------------HHHhHHhhhhhHhHhhccce
Q 021221 190 TEEESCPFSWARSPENLLQQETYLALATAFV-------------LLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 190 v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~-------------~~~~~i~~~Ptl~~~~~~~~ 240 (316)
+.| ++ +||++|+.+ .|.+.+++..+. ..+|+|.++||+.+ +|..
T Consensus 4 v~f-~a--~wC~~C~~~--~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~Pt~~~--~G~~ 60 (77)
T 1ilo_A 4 IQI-YG--TGCANCQML--EKNAREAVKELGIDAEFEKIKEMDQILEAGLTALPGLAV--DGEL 60 (77)
T ss_dssp EEE-EC--SSSSTTHHH--HHHHHHHHHHTTCCEEEEEECSHHHHHHHTCSSSSCEEE--TTEE
T ss_pred EEE-Ec--CCChhHHHH--HHHHHHHHHHcCCceEEEEecCHHHHHHCCCCcCCEEEE--CCEE
Confidence 456 88 999999999 999999988763 48899999999988 6654
No 373
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=96.99 E-value=4.4e-05 Score=60.20 Aligned_cols=49 Identities=6% Similarity=-0.127 Sum_probs=42.0
Q ss_pred CCccccccCCcccCChhhhhchHHHHHHHHHH-----------------------HHHHhHHhhhhhHhHhhcccee
Q 021221 188 NNTEEESCPFSWARSPENLLQQETYLALATAF-----------------------VLLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 188 ~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f-----------------------~~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
+++.| ++ +||++|+.+ .|.+..++..| ++.+|+|.++||+.+|.+|..+
T Consensus 34 vlv~F-~a--~wC~~C~~~--~p~l~~l~~~~~v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~~~~~G~~v 105 (135)
T 3emx_A 34 AILAV-YS--KTCPHCHRD--WPQLIQASKEVDVPIVMFIWGSLIGERELSAARLEMNKAGVEGTPTLVFYKEGRIV 105 (135)
T ss_dssp EEEEE-EE--TTCHHHHHH--HHHHHHHHTTCCSCEEEEEECTTCCHHHHHHHHHHHHHHTCCSSSEEEEEETTEEE
T ss_pred EEEEE-EC--CcCHhhhHh--ChhHHHHHHHCCCEEEEEECCCchhhhhhhhhHHHHHHcCCceeCeEEEEcCCEEE
Confidence 67788 99 999999999 99999998753 2378999999999999988754
No 374
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=96.98 E-value=0.0038 Score=54.48 Aligned_cols=91 Identities=14% Similarity=0.184 Sum_probs=67.2
Q ss_pred CCeEEEEEEcCCChH----HHhhhHHHHHHHHHcCCC---cEEEEEeCCCChhhHhhcCC----CccceEEEEe-CceeE
Q 021221 81 HEYVAVLFYASWCPF----SRNFRPSFSVLSSLYSSI---PHFAIEESAIRPSILSKYGV----HGFPTLFLLN-SSMRV 148 (316)
Q Consensus 81 ~~~vlV~Fya~WC~~----Ck~~~p~~~~la~~~~~~---~~v~~~~~~~~~~l~~~~~I----~~~Pti~l~~-g~~~~ 148 (316)
+.+++|.|+.+-+.. .......+.++|+.|.+. ..+...|.+....+.+.||+ ..+|.+++++ .+...
T Consensus 129 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~~ky 208 (252)
T 2h8l_A 129 GKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGEKF 208 (252)
T ss_dssp SSSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTSCEE
T ss_pred CCCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcCcEe
Confidence 456677777543321 224778888899999765 77777788888889999999 3599999993 23445
Q ss_pred EEeCCCCHHH--HHHHHHHhhCCCC
Q 021221 149 RYHGSRTLDS--LVAFYSDVTASLD 171 (316)
Q Consensus 149 ~~~G~~~~~~--l~~fi~~~~~~~~ 171 (316)
.+.+..+.+. |.+|+++....+.
T Consensus 209 ~~~~~~t~~~~~i~~F~~~~~~Gkl 233 (252)
T 2h8l_A 209 VMQEEFSRDGKALERFLQDYFDGNL 233 (252)
T ss_dssp ECCSCCCTTSHHHHHHHHHHHHTCS
T ss_pred cCCcccCcchHHHHHHHHHHHCCCc
Confidence 5667788888 9999999886543
No 375
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=96.95 E-value=0.00011 Score=71.44 Aligned_cols=49 Identities=22% Similarity=0.241 Sum_probs=43.3
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH---------------------HHHhHHhhhhhHhHhhccc
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV---------------------LLRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~---------------------~~~~~i~~~Ptl~~~~~~~ 239 (316)
+.+++.| ++ +||++|+++ .|.|+.+|..+. +.+|+|.++||+++|..|.
T Consensus 31 k~vlV~F-yA--~WC~pCk~~--~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~PTl~~f~~g~ 100 (519)
T 3t58_A 31 SAWAVEF-FA--SWCGHAIAF--APTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFPTVRFFQAFT 100 (519)
T ss_dssp SEEEEEE-EC--TTSHHHHHH--HHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSBSEEEEECTTC
T ss_pred CeEEEEE-EC--CCCHHHHHH--HHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcccCEEEEEcCcc
Confidence 4578899 99 999999999 999999998873 3789999999999998654
No 376
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=96.93 E-value=0.0016 Score=56.01 Aligned_cols=97 Identities=19% Similarity=0.269 Sum_probs=67.8
Q ss_pred eCCcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcCC--CcEEEEEe-------------------
Q 021221 63 EGDEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEE------------------- 120 (316)
Q Consensus 63 ~~~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~~--~~~v~~~~------------------- 120 (316)
+++++++.++ .++.+|+.|| +.||+.|......|.+..++|.. ...+++..
T Consensus 45 ~g~~vsLsd~-------~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh~~w~~~~~~~~~~ 117 (219)
T 3tue_A 45 SFKKISLSSY-------KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAHLQWTLQDRKKGGL 117 (219)
T ss_dssp CEEEEEGGGG-------TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCC
T ss_pred CCcEEehHHh-------CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhHHHHhhhhHHhcCc
Confidence 3456677776 6789999999 99999999999999999998865 34444421
Q ss_pred --------CCCChhhHhhcCCC----cc--ceEEEE--eCceeEEEe----CCCCHHHHHHHHHHh
Q 021221 121 --------SAIRPSILSKYGVH----GF--PTLFLL--NSSMRVRYH----GSRTLDSLVAFYSDV 166 (316)
Q Consensus 121 --------~~~~~~l~~~~~I~----~~--Pti~l~--~g~~~~~~~----G~~~~~~l~~fi~~~ 166 (316)
.|.+.++++.|||- ++ -.++++ +|.....+. -.++.+++.+.|+..
T Consensus 118 ~~l~fpllsD~~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~aL 183 (219)
T 3tue_A 118 GTMAIPILADKTKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAF 183 (219)
T ss_dssp CSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred cccccccccCcccHHHHHcCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHHh
Confidence 12345789999984 33 356666 454443332 256888888888765
No 377
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=96.91 E-value=0.00016 Score=56.42 Aligned_cols=51 Identities=10% Similarity=0.047 Sum_probs=42.5
Q ss_pred cCCCccccccCCcccCChhhhhchHHHH--HHHHHHH-------------------HHHhHH---hhhhhHhHh-hccce
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYL--ALATAFV-------------------LLRLVY---IFLPTLLIF-AQFTW 240 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~--~lA~~f~-------------------~~~~~i---~~~Ptl~~~-~~~~~ 240 (316)
+.+++.| ++ +||++|+.+ .|.+. .++..+. ..+|+| .++||+.++ .+|..
T Consensus 30 k~vlv~f-~a--~wC~~C~~~--~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~ 104 (133)
T 3fk8_A 30 KPTLLVF-GA--NWCTDCRAL--DKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKV 104 (133)
T ss_dssp CCEEEEE-EC--TTCHHHHHH--HHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCE
T ss_pred CcEEEEE-cC--CCCHHHHHH--HHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCE
Confidence 4467888 99 999999999 89999 8887763 388999 999999999 77764
Q ss_pred e
Q 021221 241 R 241 (316)
Q Consensus 241 ~ 241 (316)
+
T Consensus 105 ~ 105 (133)
T 3fk8_A 105 R 105 (133)
T ss_dssp E
T ss_pred E
Confidence 3
No 378
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=96.91 E-value=0.0064 Score=53.74 Aligned_cols=82 Identities=11% Similarity=0.083 Sum_probs=57.8
Q ss_pred CeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEE--eCC---------------CChhhHhhcCCCcc--ceEEEE
Q 021221 82 EYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIE--ESA---------------IRPSILSKYGVHGF--PTLFLL 142 (316)
Q Consensus 82 ~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~--~~~---------------~~~~l~~~~~I~~~--Pti~l~ 142 (316)
...+..|..++||+|.+....+++++..+. +..+.+. +.+ .++.+.+++|.+++ |++++
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~~~-vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVyTPqI~I- 120 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQKGD-VVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQAIL- 120 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHHTS-SEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCCSSEEEE-
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhccCC-eeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCcccCCEEEE-
Confidence 357888999999999999999999987753 3322332 221 11247778999998 99766
Q ss_pred eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 143 NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 143 ~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
||+. ..|..+.+.|.+.|.+...
T Consensus 121 ng~~---~v~G~d~~~l~~~l~~~~~ 143 (270)
T 2axo_A 121 NGRD---HVKGADVRGIYDRLDAFKR 143 (270)
T ss_dssp TTTE---EEETTCHHHHHHHHHHHHH
T ss_pred CCEE---eecCCCHHHHHHHHHHhhc
Confidence 7763 2234478889998877644
No 379
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=96.87 E-value=6.2e-05 Score=58.48 Aligned_cols=51 Identities=14% Similarity=0.121 Sum_probs=40.2
Q ss_pred ccCCCccccccCCcccC--------------ChhhhhchHHHHHHHHHHH----------------HHHhHHhhhhhHhH
Q 021221 185 EKHNNTEEESCPFSWAR--------------SPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLI 234 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~--------------~~~~~l~~~~~~~lA~~f~----------------~~~~~i~~~Ptl~~ 234 (316)
.+.+++.| ++ |||+ +|+.+ .|.+..++..|. +.+|+|.++||+.+
T Consensus 21 ~k~vlv~F-~a--~wC~~c~~l~~~~~~~~~~C~~~--~p~~~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~ 95 (123)
T 1oaz_A 21 DGAILVDF-WA--EWCGPIEESDDRRYDLVGPCKMI--APILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 95 (123)
T ss_dssp SSEEEEEE-EC--SSCSCBSSSTTSCCSCCCCCCTT--HHHHTTC-------CEEEEEETTSCTTTGGGGTCCBSSEEEE
T ss_pred CCeEEEEE-EC--CCCccccccccccccCCCCcHHH--HHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEE
Confidence 45578888 99 9999 99999 999999998874 28899999999999
Q ss_pred hhccce
Q 021221 235 FAQFTW 240 (316)
Q Consensus 235 ~~~~~~ 240 (316)
|.+|..
T Consensus 96 ~~~G~~ 101 (123)
T 1oaz_A 96 FKNGEV 101 (123)
T ss_dssp EESSSE
T ss_pred EECCEE
Confidence 977764
No 380
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=96.83 E-value=0.00011 Score=57.81 Aligned_cols=50 Identities=20% Similarity=0.238 Sum_probs=40.1
Q ss_pred CCCccccccCCcccCChhhhhchHHH---HHHHHHH-------------------HHHHhHHhhhhhHhHh-hcccee
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETY---LALATAF-------------------VLLRLVYIFLPTLLIF-AQFTWR 241 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~---~~lA~~f-------------------~~~~~~i~~~Ptl~~~-~~~~~~ 241 (316)
.+++.| ++ +||++|+++ .|.+ ..++..+ ++.+|+|.++||+.++ .+|..+
T Consensus 33 ~vlv~F-~a--~wC~~C~~~--~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~v 105 (134)
T 2fwh_A 33 PVMLDL-YA--DWCVACKEF--EKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEH 105 (134)
T ss_dssp CEEEEE-EC--TTCHHHHHH--HHHTTTSHHHHHHTTTSEEEEEECTTCCHHHHHHHHHTTCCSSSEEEEECTTSCBC
T ss_pred cEEEEE-EC--CCCHHHHHH--HHHhcCCHHHHHHhcCcEEEEEeCCCCcchHHHHHHHcCCCCCCEEEEECCCCCEe
Confidence 367788 99 999999999 8877 6776654 2378999999999999 777743
No 381
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=96.81 E-value=0.0001 Score=59.09 Aligned_cols=51 Identities=14% Similarity=0.016 Sum_probs=34.8
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHH-----------------HHHHhHHhhhhhHhHhhccce
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAF-----------------VLLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f-----------------~~~~~~i~~~Ptl~~~~~~~~ 240 (316)
.+++.| ++.-.||++|+.+ .|.++++|..| ++.+|+|.++||+.+|.+|..
T Consensus 36 ~~vv~f-~~~~~~C~~C~~l--~P~l~~la~~~~~v~~~~~~Vd~d~~~~la~~~~V~~iPT~~~fk~G~~ 103 (142)
T 2es7_A 36 DGVILL-SSDPRRTPEVSDN--PVMIAELLREFPQFDWQVAVADLEQSEAIGDRFNVRRFPATLVFTDGKL 103 (142)
T ss_dssp SEEEEE-CCCSCC----CCH--HHHHHHHHHTCTTSCCEEEEECHHHHHHHHHTTTCCSSSEEEEESCC--
T ss_pred CEEEEE-ECCCCCCccHHHH--HHHHHHHHHHhcccceeEEEEECCCCHHHHHhcCCCcCCeEEEEeCCEE
Confidence 356666 6621249999999 99999999864 237899999999999988764
No 382
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=96.80 E-value=0.0098 Score=49.09 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=27.9
Q ss_pred HhhcCCCccceEEEEeCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 128 LSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 128 ~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
++++||.|+||+++ ||+. +.|..+.+.|.+.|++...
T Consensus 142 a~~~gv~GtPt~vv-nG~~---~~G~~~~~~l~~~i~~~~~ 178 (186)
T 3bci_A 142 AKDNHIKTTPTAFI-NGEK---VEDPYDYESYEKLLKDKIK 178 (186)
T ss_dssp HHHTTCCSSSEEEE-TTEE---CSCTTCHHHHHHHHHC---
T ss_pred HHHcCCCCCCeEEE-CCEE---cCCCCCHHHHHHHHHHHHH
Confidence 45679999999987 7753 4688899999999987654
No 383
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=96.78 E-value=0.021 Score=47.46 Aligned_cols=95 Identities=7% Similarity=0.196 Sum_probs=61.1
Q ss_pred CcccHHHHHhHHhccCCCeEEEEEE-cCCChHHH-hhhHHHHHHHHHc-C--CCc-EEEEEeC-----------------
Q 021221 65 DEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSR-NFRPSFSVLSSLY-S--SIP-HFAIEES----------------- 121 (316)
Q Consensus 65 ~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck-~~~p~~~~la~~~-~--~~~-~v~~~~~----------------- 121 (316)
+++++.+. -.++++++.|| +.|||.|. ...+.|.+...++ . +.. .+++...
T Consensus 33 ~~v~l~d~------~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~~~~f 106 (182)
T 1xiy_A 33 TSIDTHEL------FNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMDIKKI 106 (182)
T ss_dssp EEEEHHHH------STTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTTCCSS
T ss_pred eeEeHHHH------hCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcCCCCc
Confidence 56677764 14667777776 78999999 8999999998888 4 443 4433211
Q ss_pred ----CCChhhHhhcCCC------c-----cceEEEE-eCceeEEEeCC-------------CCHHHHHHHHHH
Q 021221 122 ----AIRPSILSKYGVH------G-----FPTLFLL-NSSMRVRYHGS-------------RTLDSLVAFYSD 165 (316)
Q Consensus 122 ----~~~~~l~~~~~I~------~-----~Pti~l~-~g~~~~~~~G~-------------~~~~~l~~fi~~ 165 (316)
|.+.++++.||+. + ..+++++ +|+....+... .+.+++.+.|++
T Consensus 107 ~lLsD~~~~~a~~yGv~~~~~~~G~g~~~~R~tfvIddG~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~~ 179 (182)
T 1xiy_A 107 KYISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAIVENNILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLKN 179 (182)
T ss_dssp EEEECTTSHHHHHTTCEEECGGGTCCEEECCEEEEEETTEEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHHC
T ss_pred eEEEeCchHHHHHhCCceeccccCCCCceEEEEEEEcCCEEEEEEEeCCcccccccCcccCCCHHHHHHHHHh
Confidence 1234678888873 2 3556666 56655544422 456777777753
No 384
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=96.77 E-value=0.00024 Score=55.02 Aligned_cols=51 Identities=18% Similarity=0.153 Sum_probs=39.3
Q ss_pred ccCCCccccccCCcccCChhhhhchHHH---HHHHHHH------------------HHHHhHHhhhhhHhHh-hccce
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETY---LALATAF------------------VLLRLVYIFLPTLLIF-AQFTW 240 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~---~~lA~~f------------------~~~~~~i~~~Ptl~~~-~~~~~ 240 (316)
.+.+++.| ++ +||++|+++ .|.+ ..++..+ ++.+|+|.++||+.++ .+|..
T Consensus 27 ~k~vlv~f-~a--~wC~~C~~~--~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~G~~ 99 (130)
T 2kuc_A 27 DKLLFVDC-FT--TWCGPCKRL--SKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEV 99 (130)
T ss_dssp SSCEEEEE-CC--TTCTHHHHH--HHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSCEEEEECTTSCE
T ss_pred CCeEEEEE-EC--CCCccHHHH--HHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCCEEEEECCCCcE
Confidence 34577888 99 999999999 8877 5555443 2378899999999999 56653
No 385
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=96.73 E-value=0.014 Score=49.41 Aligned_cols=36 Identities=19% Similarity=0.320 Sum_probs=30.9
Q ss_pred hhcCCCccceEEEEeCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 129 SKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 129 ~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
+++||+|+||+++ ||+ .+.|..+.+.|.+.|++...
T Consensus 162 ~~~GV~GtPtfvv-ng~---~~~G~~~~e~l~~~i~~~~~ 197 (205)
T 3gmf_A 162 NQYNVSGTPSFMI-DGI---LLAGTHDWASLRPQILARLN 197 (205)
T ss_dssp HHHCCCSSSEEEE-TTE---ECTTCCSHHHHHHHHHHHHT
T ss_pred HHcCCccCCEEEE-CCE---EEeCCCCHHHHHHHHHHHhh
Confidence 7789999999986 775 36799999999999998765
No 386
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=96.72 E-value=0.00038 Score=56.87 Aligned_cols=53 Identities=11% Similarity=0.071 Sum_probs=41.1
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHHHHHH-----------------HHhHH--hhhhhHhHh-hccceeh
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALATAFVL-----------------LRLVY--IFLPTLLIF-AQFTWRR 242 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~-----------------~~~~i--~~~Ptl~~~-~~~~~~~ 242 (316)
.+.+++.| ++ +||++|+.+ .|.+..++..+.. .++.+ .++||+.+| .+|..+.
T Consensus 46 ~k~vlv~F-~a--~WC~~C~~~--~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~ 118 (164)
T 1sen_A 46 GLPLMVII-HK--SWCGACKAL--KPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVHP 118 (164)
T ss_dssp TCCEEEEE-EC--TTCHHHHHH--HHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCBCT
T ss_pred CCeEEEEE-EC--CCCHHHHHH--HHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCEEE
Confidence 34577888 99 999999999 9999987765531 56677 559999999 7777543
No 387
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=96.56 E-value=0.013 Score=52.62 Aligned_cols=91 Identities=14% Similarity=0.173 Sum_probs=63.0
Q ss_pred HHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhH--hhcC-----C--------
Q 021221 69 LQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSIL--SKYG-----V-------- 133 (316)
Q Consensus 69 ~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~--~~~~-----I-------- 133 (316)
++++ +...+++.++.|. . .....+.|.+++..|.+...|+....++...+. ++|+ |
T Consensus 154 l~~~----l~~~~~~~vi~fs-~----~~~~~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~ 224 (298)
T 3ed3_A 154 LGSL----LRKSPKLSVVLFS-K----QDKISPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVI 224 (298)
T ss_dssp HHHH----HTSCSSEEEEEEE-S----SSSCCHHHHHHHHHTBTTEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHH
T ss_pred HHHH----HhcCCceEEEEEc-C----CCcchHHHHHHHHHhhcCcEEEEEcchHhhhhhhhhhhcccCcchhhhhhccc
Confidence 6655 3344577777763 2 234568999999999887767666543322222 3333 3
Q ss_pred -----CccceEEEEe--CceeEEEeC-CCCHHHHHHHHHHhhC
Q 021221 134 -----HGFPTLFLLN--SSMRVRYHG-SRTLDSLVAFYSDVTA 168 (316)
Q Consensus 134 -----~~~Pti~l~~--g~~~~~~~G-~~~~~~l~~fi~~~~~ 168 (316)
...|++++|+ ++....|.| ..+.++|.+||.+..+
T Consensus 225 ~~~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~~i~~fi~~~~~ 267 (298)
T 3ed3_A 225 PEQRQSDKSKLVVFDADKDKFWEYEGNSINKNDISKFLRDTFS 267 (298)
T ss_dssp HHHTTCSSCEEEEEETTTTEEEECCCSSCCHHHHHHHHHHHHT
T ss_pred ccccccCCCeEEEEcCCCCceEEeccccCCHHHHHHHHHhhcC
Confidence 6799999993 577889995 6799999999997766
No 388
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.54 E-value=0.0019 Score=55.83 Aligned_cols=86 Identities=15% Similarity=0.261 Sum_probs=52.3
Q ss_pred cHHHHHhHHhcc-CCCeEEEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCccceEEEEeCce
Q 021221 68 SLQMALNMVHKN-SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSM 146 (316)
Q Consensus 68 ~~~~~~~~i~~~-~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~~g~~ 146 (316)
+.+++++.+... -....++.|..+||++|++.+..+++..-.| ..+.++......++.+.+|..++|+++ ++|+.
T Consensus 154 ~~~~il~~l~~~~i~~~~i~ly~~~~Cp~C~~a~~~L~~~~i~~---~~~~i~~~~~~~~l~~~~g~~~vP~~~-~~g~~ 229 (241)
T 1nm3_A 154 DADTMLKYLAPQHQVQESISIFTKPGCPFCAKAKQLLHDKGLSF---EEIILGHDATIVSVRAVSGRTTVPQVF-IGGKH 229 (241)
T ss_dssp SHHHHHHHHCTTSCCCCCEEEEECSSCHHHHHHHHHHHHHTCCC---EEEETTTTCCHHHHHHHTCCSSSCEEE-ETTEE
T ss_pred CHHHHHHHhhhhccccceEEEEECCCChHHHHHHHHHHHcCCce---EEEECCCchHHHHHHHHhCCCCcCEEE-ECCEE
Confidence 467766555321 1244578899999999999999998753222 222222211224588889999999985 36643
Q ss_pred eEEEeCCCCHHHHHHHH
Q 021221 147 RVRYHGSRTLDSLVAFY 163 (316)
Q Consensus 147 ~~~~~G~~~~~~l~~fi 163 (316)
+ | ..++|.+++
T Consensus 230 i----~--g~~~i~~~l 240 (241)
T 1nm3_A 230 I----G--GSDDLEKYF 240 (241)
T ss_dssp E----E--SHHHHHHC-
T ss_pred E----E--CHHHHHHHh
Confidence 2 2 345555544
No 389
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=96.50 E-value=0.049 Score=47.27 Aligned_cols=92 Identities=15% Similarity=0.181 Sum_probs=67.1
Q ss_pred CCCeEEEEEEcC-CC---h-HHHhhhHHHHHHHHHcCCCcEEEEEeCCCChhhHhhcCCCc--cc-eEEEEe-CceeEEE
Q 021221 80 SHEYVAVLFYAS-WC---P-FSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHG--FP-TLFLLN-SSMRVRY 150 (316)
Q Consensus 80 ~~~~vlV~Fya~-WC---~-~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~l~~~~~I~~--~P-ti~l~~-g~~~~~~ 150 (316)
.+++.++.|+.+ .+ . ..+.....+.++++.|+ ...+...|.+......+.||+.. +| .+++++ .+....+
T Consensus 131 ~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k-ki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~~~~ky~~ 209 (250)
T 3ec3_A 131 SKRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP-EYTFAIADEEDYATEVKDLGLSESGGDVNAAILDESGKKFAM 209 (250)
T ss_dssp CSSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT-TSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECTTSCEEEC
T ss_pred ccCccEEEEEecccccccchhHHHHHHHHHHHHHhhc-ceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcCCCceecC
Confidence 367777778753 33 3 34567899999999999 66677778877888889999974 44 666664 3334445
Q ss_pred e-CCCCHHHHHHHHHHhhCCCCC
Q 021221 151 H-GSRTLDSLVAFYSDVTASLDK 172 (316)
Q Consensus 151 ~-G~~~~~~l~~fi~~~~~~~~~ 172 (316)
. +..+.++|.+|+++....+.+
T Consensus 210 ~~~~~t~~~i~~Fv~~~~~Gkl~ 232 (250)
T 3ec3_A 210 EPEEFDSDALREFVMAFKKGKLK 232 (250)
T ss_dssp CCCSCCHHHHHHHHHHHHTTCCC
T ss_pred CcccCCHHHHHHHHHHHHCCCcc
Confidence 4 678999999999999886543
No 390
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=96.48 E-value=0.00077 Score=55.03 Aligned_cols=52 Identities=4% Similarity=-0.121 Sum_probs=36.9
Q ss_pred ccCCCccccccCCcccCChhhhhchHHH---HHHHHHHH-----------------------------------------
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETY---LALATAFV----------------------------------------- 220 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~---~~lA~~f~----------------------------------------- 220 (316)
.+.+++.| ++ +||++|+.+ .+.. ..+...+.
T Consensus 47 gk~vlv~F-~A--~WC~~C~~~--~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (172)
T 3f9u_A 47 NKPVMLDF-TG--YGCVNCRKM--ELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGDKWSYL 121 (172)
T ss_dssp TCCEEEEE-EC--TTCHHHHHH--HHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHHHHHHH
T ss_pred CCeEEEEE-EC--CCCHHHHHH--HHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchhhhhhhhhhhhhHH
Confidence 44578888 99 999999997 4333 33333331
Q ss_pred -HHHhHHhhhhhHhHh-hcccee
Q 021221 221 -LLRLVYIFLPTLLIF-AQFTWR 241 (316)
Q Consensus 221 -~~~~~i~~~Ptl~~~-~~~~~~ 241 (316)
..+|+|.++||+.++ .+|..+
T Consensus 122 ~~~~~~v~~~Pt~~lid~~G~~~ 144 (172)
T 3f9u_A 122 QRVKFGANAQPFYVLIDNEGNPL 144 (172)
T ss_dssp HHHHHSCCCSSEEEEECTTSCBS
T ss_pred HHHHcCCCCcceEEEECCCCCEE
Confidence 357889999999999 677643
No 391
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=96.46 E-value=0.019 Score=49.55 Aligned_cols=123 Identities=14% Similarity=0.161 Sum_probs=69.1
Q ss_pred CchhHHHHHHhhhcCCCccccCCCCCcceEEeCCcccHHHHHhHHhccCCCeEEEEEEcCCChHHHhhhHHHHHHHHHcC
Q 021221 32 PTESVTDSIFRFQDSFCPISCNDFQDIVGVIEGDEVSLQMALNMVHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS 111 (316)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~i~~~~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~ 111 (316)
+.+.+.+++...........+.. ..++..++.++ +++.+. .+..+++.+.|...-|.. ..+++..+.
T Consensus 114 ~~~~l~~~i~~~l~~~~~~~p~~-~p~l~~~~~~~--l~~~~~---~~~~~~~al~f~~~~~~~-------~~~~~~d~~ 180 (244)
T 3q6o_A 114 DVQTLRERLIDALESHHDTWPPA-CPPLEPAXLEE--IDGFFA---RNNEEYLALIFEXGGSYL-------AREVALDLS 180 (244)
T ss_dssp CHHHHHHHHHHHHHTCTTSCCTT-SCCCSCCCHHH--HHTHHH---HCCCSEEEEEEECTTCCH-------HHHHHHHTT
T ss_pred CHHHHHHHHHHHHHhccccCCCC-CCCcccccHHH--HHHHhh---cCCCceEEEEEEECCcch-------HHHHHHHhc
Confidence 45566666666554433211111 11122223233 555532 356788888898876543 333444444
Q ss_pred C--CcEEEEEeCCCChhhHhhcCCCccceEEEE-eCceeEEEeC-CCCHHHHHHHHHHhhC
Q 021221 112 S--IPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHG-SRTLDSLVAFYSDVTA 168 (316)
Q Consensus 112 ~--~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~-~g~~~~~~~G-~~~~~~l~~fi~~~~~ 168 (316)
. .+.+...+. .+.+++++|||+++||+++| .++....+.. .-+.+.+..++++..|
T Consensus 181 ~~~~i~v~~~~~-~~~~l~~~f~v~~~Pslvl~~~~g~~~~~~~~~~~r~~~~~~l~~~~~ 240 (244)
T 3q6o_A 181 QHKGVAVRRVLN-TEANVVRKFGVTDFPSCYLLFRNGSVSRVPVLMESRSFYTAYLQRLSG 240 (244)
T ss_dssp TCTTEEEEEEET-TCHHHHHHHTCCCSSEEEEEETTSCEEECCCSSSSHHHHHHHHHTC--
T ss_pred cCCceEEEEEeC-chHHHHHHcCCCCCCeEEEEeCCCCeEeeccccccHHHHHHHHHhCCC
Confidence 3 233444332 46899999999999999998 4445555554 4466777777777665
No 392
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=96.29 E-value=0.05 Score=45.70 Aligned_cols=43 Identities=19% Similarity=0.413 Sum_probs=36.1
Q ss_pred hhHhhcCCCccceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 126 SILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 126 ~l~~~~~I~~~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
+.+.++||.++||++++ ||+.+..+.|..+.+.|.+.|++.+.
T Consensus 167 ~~a~~~gv~g~Pt~~i~~~G~~~~~~~G~~~~~~l~~~l~~~~~ 210 (216)
T 2in3_A 167 QRVAQWGISGFPALVVESGTDRYLITTGYRPIEALRQLLDTWLQ 210 (216)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCcccceEEEEECCEEEEeccCCCCHHHHHHHHHHHHH
Confidence 34567899999999988 88776678899999999999988764
No 393
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=96.27 E-value=0.00029 Score=63.31 Aligned_cols=45 Identities=13% Similarity=0.058 Sum_probs=36.0
Q ss_pred CCccccccCCcccCChhhhhchHHHHHHHHHH----------------HHHHhHHhhhhhHhHhhccc
Q 021221 188 NNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 188 ~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f----------------~~~~~~i~~~Ptl~~~~~~~ 239 (316)
..++| ++ |||+||+++ +|.|+++|..+ ++.+++|+++||+. .+|.
T Consensus 200 ~vV~F-~A--~WC~~Ck~l--~p~le~lA~~l~~Vd~d~~d~~~~~~~la~~~gI~~vPT~~--i~G~ 260 (291)
T 3kp9_A 200 GGTMY-GA--YWCPHCQDQ--KELFGAAFDQVPYVECSPNGPGTPQAQECTEAGITSYPTWI--INGR 260 (291)
T ss_dssp TCEEE-EC--TTCHHHHHH--HHHHGGGGGGSCEEESCSSCSSSCCCHHHHTTTCCSTTEEE--ETTE
T ss_pred CEEEE-EC--CCCHHHHHH--HHHHHHHHHHcCEEEEeecCchhhHHHHHHHcCCcccCeEE--ECCE
Confidence 56788 99 999999999 99999998543 34689999999943 3664
No 394
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=96.17 E-value=0.0014 Score=47.33 Aligned_cols=55 Identities=20% Similarity=0.311 Sum_probs=36.8
Q ss_pred EEEEEcC----CChHHHhhhHHHHHHHHHcCCCcEEEEEeCC-----CC----hhhHhhcCCC-----ccceEEEEeCc
Q 021221 85 AVLFYAS----WCPFSRNFRPSFSVLSSLYSSIPHFAIEESA-----IR----PSILSKYGVH-----GFPTLFLLNSS 145 (316)
Q Consensus 85 lV~Fya~----WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~-----~~----~~l~~~~~I~-----~~Pti~l~~g~ 145 (316)
++.|+.+ |||+|++....+++.. +. +...+.+ .+ .++.+..|.. ++|++++=+|+
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~g-----i~-y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i~~g~ 74 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVKK-----QP-FEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFAPDGS 74 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHTT-----CC-EEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEECTTSC
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHcC-----CC-EEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEEECCE
Confidence 5678899 9999999998888742 22 2222333 33 3467778888 89987641554
No 395
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=96.13 E-value=0.059 Score=45.24 Aligned_cols=43 Identities=16% Similarity=0.228 Sum_probs=34.9
Q ss_pred hhHhhcCCCccceEEEE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 126 SILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 126 ~l~~~~~I~~~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
..+.++||.|+||+++. +|+......|..+.+.+.+.|++.+.
T Consensus 160 ~~a~~~gv~g~Pt~~v~~~~~~~~~~~g~~~~e~~~~~i~~~~~ 203 (208)
T 3kzq_A 160 SLAKSLGVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRERII 203 (208)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEECCCSSCSHHHHHHHHHHHH
T ss_pred HHHHHcCCCcccEEEEEECCEEEEeeCCCCCHHHHHHHHHHHHh
Confidence 34567899999999998 56666667789999999999988764
No 396
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=96.08 E-value=0.00037 Score=53.85 Aligned_cols=48 Identities=15% Similarity=0.036 Sum_probs=39.5
Q ss_pred CCCccccccCCc-------ccCChhhhhchHHHHHHHHHH-----------------------HHHHhHHhhhhhHhHhh
Q 021221 187 HNNTEEESCPFS-------WARSPENLLQQETYLALATAF-----------------------VLLRLVYIFLPTLLIFA 236 (316)
Q Consensus 187 ~~~v~f~~~~~p-------w~~~~~~~l~~~~~~~lA~~f-----------------------~~~~~~i~~~Ptl~~~~ 236 (316)
.+++.| ++ + ||++|+.+ .|.+..++..+ +..+++|.++||+.+|.
T Consensus 26 ~v~v~F-~a--~~~~~~~~wC~~C~~~--~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~~~~i~~~Pt~~~~~ 100 (123)
T 1wou_A 26 TIFAYF-TG--SKDAGGKSWCPDCVQA--EPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYG 100 (123)
T ss_dssp EEEEEE-EC--CBCTTCCBSCHHHHHH--HHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHHHHCCCSSSEEEETT
T ss_pred EEEEEE-Ec--cCCCCCCCcCHHHHHh--hHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHHHCCCCeeCEEEEEc
Confidence 366777 88 8 99999999 99999988765 22679999999999998
Q ss_pred ccc
Q 021221 237 QFT 239 (316)
Q Consensus 237 ~~~ 239 (316)
++.
T Consensus 101 ~~~ 103 (123)
T 1wou_A 101 TPQ 103 (123)
T ss_dssp SSC
T ss_pred CCc
Confidence 743
No 397
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=96.04 E-value=0.0066 Score=48.01 Aligned_cols=70 Identities=13% Similarity=0.183 Sum_probs=41.7
Q ss_pred HHHHHhHHhccCCCeEEEEEEc----CCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCCh----hhHhhcCCCccceEE
Q 021221 69 LQMALNMVHKNSHEYVAVLFYA----SWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRP----SILSKYGVHGFPTLF 140 (316)
Q Consensus 69 ~~~~~~~i~~~~~~~vlV~Fya----~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~----~l~~~~~I~~~Pti~ 140 (316)
..+.++.++.. ..++|+.++ +|||+|++....|+++ ++. +...|.+.++ .+.+..|..++|.++
T Consensus 24 ~~~~v~~~i~~--~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~-----gv~-y~~vdI~~d~~~~~~L~~~~G~~tvP~Vf 95 (135)
T 2wci_A 24 TIEKIQRQIAE--NPILLYMKGSPKLPSCGFSAQAVQALAAC-----GER-FAYVDILQNPDIRAELPKYANWPTFPQLW 95 (135)
T ss_dssp HHHHHHHHHHH--CSEEEEESBCSSSBSSHHHHHHHHHHHTT-----CSC-CEEEEGGGCHHHHHHHHHHHTCCSSCEEE
T ss_pred HHHHHHHHhcc--CCEEEEEEecCCCCCCccHHHHHHHHHHc-----CCc-eEEEECCCCHHHHHHHHHHHCCCCcCEEE
Confidence 44444444432 345554444 9999999999998765 332 2233433343 345556888999874
Q ss_pred EEeCcee
Q 021221 141 LLNSSMR 147 (316)
Q Consensus 141 l~~g~~~ 147 (316)
++|+.+
T Consensus 96 -I~G~~i 101 (135)
T 2wci_A 96 -VDGELV 101 (135)
T ss_dssp -ETTEEE
T ss_pred -ECCEEE
Confidence 377543
No 398
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=95.97 E-value=0.00092 Score=53.79 Aligned_cols=52 Identities=12% Similarity=0.013 Sum_probs=39.0
Q ss_pred cCCCccccc-cCCcccCChhhhhchHHH---HHHHHHH---------------------------HHHHhHHhhhhhHhH
Q 021221 186 KHNNTEEES-CPFSWARSPENLLQQETY---LALATAF---------------------------VLLRLVYIFLPTLLI 234 (316)
Q Consensus 186 ~~~~v~f~~-~~~pw~~~~~~~l~~~~~---~~lA~~f---------------------------~~~~~~i~~~Ptl~~ 234 (316)
+.+++.| + + +||++|+.+ .|.+ ..++..+ +..+|+|.++||+.+
T Consensus 48 k~vlv~F-~ga--~wC~~C~~~--~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~ 122 (154)
T 2ju5_A 48 KPIGLFF-TGS--DWCMWCIKM--QDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVF 122 (154)
T ss_dssp CCEEEEE-ECT--TTCHHHHHH--HHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEE
T ss_pred CeEEEEE-eCC--CCCHhHHHH--HHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEE
Confidence 3467788 8 9 999999999 7777 5554433 236789999999999
Q ss_pred h-hccceeh
Q 021221 235 F-AQFTWRR 242 (316)
Q Consensus 235 ~-~~~~~~~ 242 (316)
+ .+|..+.
T Consensus 123 ~d~~G~~~~ 131 (154)
T 2ju5_A 123 IDAEGKQLA 131 (154)
T ss_dssp ECTTCCEEE
T ss_pred EcCCCCEEE
Confidence 9 6776443
No 399
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=95.81 E-value=0.025 Score=42.91 Aligned_cols=80 Identities=16% Similarity=0.292 Sum_probs=46.1
Q ss_pred HHHHHhHHhccCCCeEEEEEEc-----CCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChh----hHhhcCCCccceE
Q 021221 69 LQMALNMVHKNSHEYVAVLFYA-----SWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPS----ILSKYGVHGFPTL 139 (316)
Q Consensus 69 ~~~~~~~i~~~~~~~vlV~Fya-----~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~----l~~~~~I~~~Pti 139 (316)
..+.++.++. ++ + +|.|.. +|||+|++....+++.. +.. ...|.+.+++ +.+..|...+|.+
T Consensus 5 ~~~~v~~~i~-~~-~-Vvlf~kg~~~~~~Cp~C~~ak~~L~~~g-----i~y-~~~di~~d~~~~~~l~~~~g~~tvP~i 75 (111)
T 3zyw_A 5 LNLRLKKLTH-AA-P-CMLFMKGTPQEPRCGFSKQMVEILHKHN-----IQF-SSFDIFSDEEVRQGLKAYSSWPTYPQL 75 (111)
T ss_dssp HHHHHHHHHT-SS-S-EEEEESBCSSSBSSHHHHHHHHHHHHTT-----CCC-EEEEGGGCHHHHHHHHHHHTCCSSCEE
T ss_pred HHHHHHHHHh-cC-C-EEEEEecCCCCCcchhHHHHHHHHHHcC-----CCe-EEEECcCCHHHHHHHHHHHCCCCCCEE
Confidence 3344444442 23 2 566777 99999999999888642 222 2223333333 4444588899998
Q ss_pred EEEeCceeEEEeCCCCHHHHHHHHH
Q 021221 140 FLLNSSMRVRYHGSRTLDSLVAFYS 164 (316)
Q Consensus 140 ~l~~g~~~~~~~G~~~~~~l~~fi~ 164 (316)
++ +|+. .|. .+++.++.+
T Consensus 76 fi-~g~~----iGG--~d~l~~l~~ 93 (111)
T 3zyw_A 76 YV-SGEL----IGG--LDIIKELEA 93 (111)
T ss_dssp EE-TTEE----EEC--HHHHHHHHH
T ss_pred EE-CCEE----Eec--HHHHHHHHH
Confidence 54 7643 332 345555544
No 400
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=95.81 E-value=0.022 Score=42.95 Aligned_cols=50 Identities=18% Similarity=0.308 Sum_probs=31.6
Q ss_pred CCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCCh----hhHhhcCCCccceEEEEeCcee
Q 021221 91 SWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRP----SILSKYGVHGFPTLFLLNSSMR 147 (316)
Q Consensus 91 ~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~----~l~~~~~I~~~Pti~l~~g~~~ 147 (316)
||||+|++....|++.. +. +...|.+.++ .+.+..|..++|+++ ++|+.+
T Consensus 31 p~Cp~C~~ak~~L~~~g-----i~-~~~~dI~~~~~~~~~l~~~~g~~tvP~if-i~g~~i 84 (109)
T 3ipz_A 31 PMCGFSNTVVQILKNLN-----VP-FEDVNILENEMLRQGLKEYSNWPTFPQLY-IGGEFF 84 (109)
T ss_dssp BSSHHHHHHHHHHHHTT-----CC-CEEEEGGGCHHHHHHHHHHHTCSSSCEEE-ETTEEE
T ss_pred CCChhHHHHHHHHHHcC-----CC-cEEEECCCCHHHHHHHHHHHCCCCCCeEE-ECCEEE
Confidence 59999999999988753 22 2222333333 445556889999764 377543
No 401
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=95.72 E-value=0.00027 Score=54.57 Aligned_cols=51 Identities=12% Similarity=-0.061 Sum_probs=35.7
Q ss_pred cCCCccccccCCcccCChhhhhchHH----HHHHHHHH----------------HHHHhHHhhhhhHhHhhcccee
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQET----YLALATAF----------------VLLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~----~~~lA~~f----------------~~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
..++|+| ++ +||++|+.+ .+. |...+..- +..+++|.+-||+++|.+|.-+
T Consensus 19 ~~~LV~F-~A--~wC~~Ck~~--~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev 89 (116)
T 3dml_A 19 ELRLLMF-EQ--PGCLYCARW--DAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVES 89 (116)
T ss_dssp CEEEEEE-EC--TTCHHHHHH--HHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEE
T ss_pred CCEEEEE-EC--CCCHHHHHH--HHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEE
Confidence 3468899 99 999999998 432 22222111 1167888899999999988753
No 402
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=95.61 E-value=0.00067 Score=55.80 Aligned_cols=48 Identities=10% Similarity=0.027 Sum_probs=39.1
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH---------------HHHhH---HhhhhhHhHhhcc
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV---------------LLRLV---YIFLPTLLIFAQF 238 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~---------------~~~~~---i~~~Ptl~~~~~~ 238 (316)
+.+++.| ++ +||++|+.+ .|.+.+++..+- ..+|. +.+.||+.++.+|
T Consensus 55 k~vvv~F-~A--~WC~pC~~~--~P~l~~l~~~~~~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~ 120 (167)
T 1z6n_A 55 RYRLLVA-GE--MWCPDCQIN--LAALDFAQRLQPNIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEE 120 (167)
T ss_dssp CEEEEEE-CC--TTCHHHHHH--HHHHHHHHHHCTTEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTT
T ss_pred CEEEEEE-EC--CCChhHHHH--HHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCC
Confidence 3467788 99 999999999 999999998652 14565 8899999999875
No 403
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=95.43 E-value=0.02 Score=41.72 Aligned_cols=55 Identities=7% Similarity=0.036 Sum_probs=35.9
Q ss_pred EEEEEcCCChHH------HhhhHHHHHHHHHcCCCcEEEEEeCCCCh----hhHhhcC--CCccceEEEEeCce
Q 021221 85 AVLFYASWCPFS------RNFRPSFSVLSSLYSSIPHFAIEESAIRP----SILSKYG--VHGFPTLFLLNSSM 146 (316)
Q Consensus 85 lV~Fya~WC~~C------k~~~p~~~~la~~~~~~~~v~~~~~~~~~----~l~~~~~--I~~~Pti~l~~g~~ 146 (316)
++.|+.+|||.| ++....+++. ++. +...|.+.++ .+.+.+| ...+|++++ +|+.
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~~-----~i~-~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi-~g~~ 70 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDGK-----RIQ-YQLVDISQDNALRDEMRTLAGNPKATPPQIVN-GNHY 70 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHHT-----TCC-CEEEETTSCHHHHHHHHHHTTCTTCCSCEEEE-TTEE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHHC-----CCc-eEEEECCCCHHHHHHHHHHhCCCCCCCCEEEE-CCEE
Confidence 677899999999 7777776653 232 3333444443 4556778 779998753 6654
No 404
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.38 E-value=0.035 Score=41.98 Aligned_cols=57 Identities=18% Similarity=0.174 Sum_probs=36.3
Q ss_pred EEEEEEcCCChHHH------hhhHHHHHHHHHcCCCcEEEEEeCCCChh----hHhhc--------CCCccceEEEEeCc
Q 021221 84 VAVLFYASWCPFSR------NFRPSFSVLSSLYSSIPHFAIEESAIRPS----ILSKY--------GVHGFPTLFLLNSS 145 (316)
Q Consensus 84 vlV~Fya~WC~~Ck------~~~p~~~~la~~~~~~~~v~~~~~~~~~~----l~~~~--------~I~~~Pti~l~~g~ 145 (316)
-++.|+.+||++|+ +....+++. ++. +...|.+.+++ +.+.+ |...+|++++ +|+
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~~-----gi~-y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~vfi-~g~ 81 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEAN-----KIE-FEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQIFN-GDR 81 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHT-----TCC-EEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEEEE-TTE
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHHc-----CCC-EEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEEEE-CCE
Confidence 47788999999999 677666653 232 33444444443 45554 7778898753 665
Q ss_pred ee
Q 021221 146 MR 147 (316)
Q Consensus 146 ~~ 147 (316)
.+
T Consensus 82 ~i 83 (111)
T 2ct6_A 82 YC 83 (111)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 405
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=95.36 E-value=0.00087 Score=51.27 Aligned_cols=53 Identities=6% Similarity=-0.132 Sum_probs=42.4
Q ss_pred CCccccccCCcccCChhhhhchHHHHHHHHHH------------------HHHHhHHh-hhhhHhHhhccceehhhh
Q 021221 188 NNTEEESCPFSWARSPENLLQQETYLALATAF------------------VLLRLVYI-FLPTLLIFAQFTWRRLIR 245 (316)
Q Consensus 188 ~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f------------------~~~~~~i~-~~Ptl~~~~~~~~~~~~~ 245 (316)
+++.| .+ .||+.|+.+ .|.++.++..- +..+++|+ ..||+++|.+|.-+-..-
T Consensus 27 vvi~k-ha--twCgpc~~~--~~~~e~~~~~~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~il~k~G~~v~~~S 98 (112)
T 3iv4_A 27 VFVLK-HS--ETCPISANA--YDQFNKFLYERDMDGYYLIVQQERDLSDYIAKKTNVKHESPQAFYFVNGEMVWNRD 98 (112)
T ss_dssp EEEEE-EC--TTCHHHHHH--HHHHHHHHHHHTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEEEEEETTEEEEEEE
T ss_pred EEEEE-EC--CcCHhHHHH--HHHHHHHhccCCceEEEEEeecCchhhHHHHHHhCCccCCCeEEEEECCEEEEEee
Confidence 56666 88 999999999 99999998641 34899999 599999999997544433
No 406
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=95.15 E-value=0.0014 Score=51.29 Aligned_cols=44 Identities=16% Similarity=0.003 Sum_probs=38.3
Q ss_pred CCccccccCCcccCChhhhhchHHHHHHHHHHHH----------------HHhHHhh--hhhHhHhhc
Q 021221 188 NNTEEESCPFSWARSPENLLQQETYLALATAFVL----------------LRLVYIF--LPTLLIFAQ 237 (316)
Q Consensus 188 ~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~----------------~~~~i~~--~Ptl~~~~~ 237 (316)
+++.| ++ + |++|+.+ .|.++++|..|.. .+|+|.+ .||+.+|..
T Consensus 26 v~v~f-~a--~-~~~c~~~--~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~~~ 87 (133)
T 2djk_A 26 LAYIF-AE--T-AEERKEL--SDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAFAIQEV 87 (133)
T ss_dssp EEEEE-CS--C-SSSHHHH--HHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSSSEEEEECT
T ss_pred EEEEE-ec--C-hhhHHHH--HHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccCCEEEEEec
Confidence 56777 88 7 7999999 9999999998853 6899999 999999986
No 407
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=94.96 E-value=0.0076 Score=55.45 Aligned_cols=61 Identities=15% Similarity=0.313 Sum_probs=38.0
Q ss_pred EEEEEcCCChHHHhhhH-HHHHHHHHcCCCcEEEEEeCCCC----hhhHhhcCCCccceEEEEeCce
Q 021221 85 AVLFYASWCPFSRNFRP-SFSVLSSLYSSIPHFAIEESAIR----PSILSKYGVHGFPTLFLLNSSM 146 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~~p-~~~~la~~~~~~~~v~~~~~~~~----~~l~~~~~I~~~Pti~l~~g~~ 146 (316)
++.|..+|||+|++... .++++.-.|..+..+.+++.+.. ..+.+..|...+|++++ +|+.
T Consensus 263 VvVYsk~~CPyC~~Ak~~LL~~~gV~y~eidVlEld~~~~~~e~~~~L~~~tG~~TVPqVFI-~Gk~ 328 (362)
T 2jad_A 263 IFVASKTYCPYSHAALNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNIYI-NGKH 328 (362)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTTCCCTTTEEEEEGGGSTTHHHHHHHHHHHHCCCSSCEEEE-TTEE
T ss_pred EEEEEcCCCcchHHHHHHHHHHcCCCcceEEEEEeccccCCHHHHHHHHHHHCCCCcCEEEE-CCEE
Confidence 67799999999999876 45654333333222232222222 34556789999999754 7753
No 408
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=94.93 E-value=0.0075 Score=46.65 Aligned_cols=52 Identities=21% Similarity=0.199 Sum_probs=33.2
Q ss_pred CCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCCh----hhHhhcCCCccceEEEEeCce
Q 021221 91 SWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRP----SILSKYGVHGFPTLFLLNSSM 146 (316)
Q Consensus 91 ~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~----~l~~~~~I~~~Pti~l~~g~~ 146 (316)
||||+|++....|++..-.+. .+...|.+.++ .+.+..|...+|.+++ +|+.
T Consensus 29 p~Cp~C~~ak~lL~~~gv~~~---~~~~~dv~~~~~~~~~l~~~sg~~tvP~vfI-~g~~ 84 (121)
T 3gx8_A 29 PKCGFSRATIGLLGNQGVDPA---KFAAYNVLEDPELREGIKEFSEWPTIPQLYV-NKEF 84 (121)
T ss_dssp BCTTHHHHHHHHHHHHTBCGG---GEEEEECTTCHHHHHHHHHHHTCCSSCEEEE-TTEE
T ss_pred CCCccHHHHHHHHHHcCCCcc---eEEEEEecCCHHHHHHHHHHhCCCCCCeEEE-CCEE
Confidence 599999999999988632211 13333433443 3455568889999854 7743
No 409
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=94.77 E-value=0.053 Score=41.60 Aligned_cols=57 Identities=19% Similarity=0.314 Sum_probs=34.6
Q ss_pred EEEEEc-----CCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCChh----hHhhcCCCccceEEEEeCcee
Q 021221 85 AVLFYA-----SWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPS----ILSKYGVHGFPTLFLLNSSMR 147 (316)
Q Consensus 85 lV~Fya-----~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~~----l~~~~~I~~~Pti~l~~g~~~ 147 (316)
+|.|.. ||||+|++....|++.. +..+...|.+.+++ +.+..|...+|++++ +|+.+
T Consensus 22 Vvvfsk~t~~~p~Cp~C~~ak~lL~~~g-----v~~~~~vdV~~d~~~~~~l~~~tg~~tvP~vfI-~g~~I 87 (118)
T 2wem_A 22 VVVFLKGTPEQPQCGFSNAVVQILRLHG-----VRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYL-NGEFV 87 (118)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHHHTT-----CCCCEEEESSSCHHHHHHHHHHHTCCSSCEEEE-TTEEE
T ss_pred EEEEEecCCCCCccHHHHHHHHHHHHcC-----CCCCEEEEcCCCHHHHHHHHHHhCCCCcCeEEE-CCEEE
Confidence 444555 59999999999988753 21122223333333 444458889999854 76443
No 410
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=94.62 E-value=0.0026 Score=48.09 Aligned_cols=42 Identities=7% Similarity=0.018 Sum_probs=33.2
Q ss_pred cccccCCcccCChhhhhchHHHHHHHHHH-----------------HHHHhHHhhhhhHhHhhccc
Q 021221 191 EEESCPFSWARSPENLLQQETYLALATAF-----------------VLLRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 191 ~f~~~~~pw~~~~~~~l~~~~~~~lA~~f-----------------~~~~~~i~~~Ptl~~~~~~~ 239 (316)
.| ++ +||++|+.+ .|.+..++..| +..++++.++||+ |.+|.
T Consensus 24 ~f-~a--~~C~~C~~~--~~~l~~~~~~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~ 82 (116)
T 2e7p_A 24 VF-SK--TYCGYCNRV--KQLLTQVGASYKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGK 82 (116)
T ss_dssp EE-EC--TTCHHHHHH--HHHHHHHTCCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTE
T ss_pred EE-EC--CCChhHHHH--HHHHHHcCCCeEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCE
Confidence 36 88 999999999 88888876533 3467889999999 56665
No 411
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=94.37 E-value=0.0037 Score=48.08 Aligned_cols=51 Identities=16% Similarity=0.050 Sum_probs=39.4
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH-------------------------------------HHHhHHhh
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV-------------------------------------LLRLVYIF 228 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~-------------------------------------~~~~~i~~ 228 (316)
+.+++.| ++ +||++|+.. .|.+..++..|. ..+|++.+
T Consensus 25 k~~lv~f-~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 99 (136)
T 1lu4_A 25 KPAVLWF-WT--PWCPFCNAE--APSLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPW 99 (136)
T ss_dssp SCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCS
T ss_pred CEEEEEE-EC--CcChhHHHH--HHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCC
Confidence 3467777 88 999999999 888888876642 25678888
Q ss_pred hhhHhHh-hcccee
Q 021221 229 LPTLLIF-AQFTWR 241 (316)
Q Consensus 229 ~Ptl~~~-~~~~~~ 241 (316)
+|++.++ .+|..+
T Consensus 100 ~P~~~lid~~G~i~ 113 (136)
T 1lu4_A 100 QPAFVFYRADGTST 113 (136)
T ss_dssp SSEEEEECTTSCEE
T ss_pred CCEEEEECCCCcEE
Confidence 9999888 566644
No 412
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=94.26 E-value=0.0044 Score=51.18 Aligned_cols=50 Identities=10% Similarity=-0.152 Sum_probs=35.4
Q ss_pred ccCCCccccccCCcccCChhhhhchH-HH--HHHHHHHH----------------HHHh--------HHhhhhhHhHhh-
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQE-TY--LALATAFV----------------LLRL--------VYIFLPTLLIFA- 236 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~-~~--~~lA~~f~----------------~~~~--------~i~~~Ptl~~~~- 236 (316)
.+.++++| ++ +||++|+.| .+ .| .+++..+. ...| ++.++||+.++.
T Consensus 39 ~KpVlvdF-~A--~WC~~Ck~m--~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~ 113 (173)
T 3ira_A 39 NKPVFLSI-GY--STCHWCHMM--AHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMTP 113 (173)
T ss_dssp TCCEEEEE-EC--TTCHHHHHH--HHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSSEEEEECT
T ss_pred CCCEEEec-cc--chhHhhccc--cccccCCHHHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCCCCCcceeeECC
Confidence 55688999 99 999999998 66 22 34443331 1444 789999999995
Q ss_pred ccc
Q 021221 237 QFT 239 (316)
Q Consensus 237 ~~~ 239 (316)
+|.
T Consensus 114 dG~ 116 (173)
T 3ira_A 114 GKK 116 (173)
T ss_dssp TSC
T ss_pred CCC
Confidence 554
No 413
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=94.21 E-value=0.0066 Score=46.02 Aligned_cols=48 Identities=8% Similarity=-0.116 Sum_probs=38.8
Q ss_pred CCccccccCCcccCChhhhhchHHHHHHHHHH--------------HHHHhHHhhhhhHhHhhcccee
Q 021221 188 NNTEEESCPFSWARSPENLLQQETYLALATAF--------------VLLRLVYIFLPTLLIFAQFTWR 241 (316)
Q Consensus 188 ~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f--------------~~~~~~i~~~Ptl~~~~~~~~~ 241 (316)
.++.| ++ |||+.|+.+ .+..++++..+ +..+|++. .|+|.+|.+|..+
T Consensus 31 ~vv~y-~~--~~C~~C~~a--~~~L~~l~~e~~i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v 92 (107)
T 2fgx_A 31 KLVVY-GR--EGCHLCEEM--IASLRVLQKKSWFELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL 92 (107)
T ss_dssp CEEEE-EC--SSCHHHHHH--HHHHHHHHHHSCCCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE
T ss_pred EEEEE-eC--CCChhHHHH--HHHHHHHHHhcCCeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE
Confidence 46677 88 999999999 99999987764 23688887 9999988888743
No 414
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=94.14 E-value=0.0041 Score=47.67 Aligned_cols=29 Identities=10% Similarity=-0.013 Sum_probs=23.5
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAF 219 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f 219 (316)
+.+++.| ++ +||++|+.. .|.+..++..|
T Consensus 26 k~~ll~f-~~--~~C~~C~~~--~~~l~~~~~~~ 54 (136)
T 1zzo_A 26 KPAVLWF-WA--PWCPTCQGE--APVVGQVAASH 54 (136)
T ss_dssp SCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHC
T ss_pred CeEEEEE-Ec--CCChhHHHH--HHHHHHHHHHc
Confidence 3466777 88 999999999 88888887654
No 415
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=93.94 E-value=0.017 Score=47.48 Aligned_cols=63 Identities=10% Similarity=0.068 Sum_probs=41.8
Q ss_pred CcccHHHHHhHHhccCCCeEEEEEE-cCCChHHHhhhHHHHHHHHHcC--CCc-EEEEEe--CCCChhhHhhcCC
Q 021221 65 DEVSLQMALNMVHKNSHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYS--SIP-HFAIEE--SAIRPSILSKYGV 133 (316)
Q Consensus 65 ~~~~~~~~~~~i~~~~~~~vlV~Fy-a~WC~~Ck~~~p~~~~la~~~~--~~~-~v~~~~--~~~~~~l~~~~~I 133 (316)
+++++.+.+ .++.+++.|| ..|||.|....+.|.+..++|. +.. .+++.- .......++++++
T Consensus 32 ~~v~L~d~~------~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~~~ 100 (171)
T 2xhf_A 32 KSFPIHDVF------RGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTVDP 100 (171)
T ss_dssp CEEETHHHH------TTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHHCT
T ss_pred cEEEhHHHh------CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCC
Confidence 577777741 5677777777 6799999999999999888876 443 444431 1122345555554
No 416
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=93.40 E-value=0.0039 Score=45.36 Aligned_cols=44 Identities=11% Similarity=-0.121 Sum_probs=35.1
Q ss_pred ccccccCCcccCChhhhhchHHHHHHHHH-H----------HHHHhHHhhhhhHhHhhccce
Q 021221 190 TEEESCPFSWARSPENLLQQETYLALATA-F----------VLLRLVYIFLPTLLIFAQFTW 240 (316)
Q Consensus 190 v~f~~~~~pw~~~~~~~l~~~~~~~lA~~-f----------~~~~~~i~~~Ptl~~~~~~~~ 240 (316)
+.| ++ |||+.|+.+ +|.+..++.. | +..+|++. .||+.+ .+|..
T Consensus 4 v~f-~a--~~C~~C~~~--~~~L~~~~~~~~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~ 58 (87)
T 1ttz_A 4 TLY-QR--DDCHLCDQA--VEALAQARAGAFFSVFIDDDAALESAYGLR-VPVLRD-PMGRE 58 (87)
T ss_dssp EEE-EC--SSCHHHHHH--HHHHHHTTCCCEEEEECTTCHHHHHHHTTT-CSEEEC-TTCCE
T ss_pred EEE-EC--CCCchHHHH--HHHHHHHHHhheEEEECCCCHHHHHHhCCC-cCeEEE-ECCEE
Confidence 456 78 999999999 9999988875 3 23788998 999988 66663
No 417
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=93.14 E-value=1.1 Score=33.21 Aligned_cols=84 Identities=13% Similarity=0.160 Sum_probs=69.5
Q ss_pred EEEEEEcCCChHHHhhhHHHHHHHHH-c-CCCcEEEEEeCCCChhhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHHH
Q 021221 84 VAVLFYASWCPFSRNFRPSFSVLSSL-Y-SSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVA 161 (316)
Q Consensus 84 vlV~Fya~WC~~Ck~~~p~~~~la~~-~-~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~ 161 (316)
....|.|.--+.+++....+.++-+. + ++...+.++|..+++++++.++|-.+||++=....++.+..|..=.+.|..
T Consensus 13 L~lLyvag~tp~S~~ai~nL~~i~e~~l~~~~y~LeVIDv~eqPeLAE~~~IvATPTLIK~~P~P~rriiGd~i~~ql~~ 92 (105)
T 1t4y_A 13 LLLQLFVDTRPLSQHIVQRVKNILAAVEATVPISLQVINVADQPQLVEYYRLVVTPALVKIGPGSRQVLSGIDLTDQLAN 92 (105)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHCCSSCEEEEEEETTTCHHHHHHTTCCSSSEEEEEESSSCEEEESSCHHHHHHH
T ss_pred hheeeEeCCCccHHHHHHHHHHHHHHhccCCceEEEEeecccCHHHHhHcCeeeccHhhccCCCCceEEeChHHHHHHHH
Confidence 44578888889999888888887654 4 457888899999999999999999999999776778889999987888888
Q ss_pred HHHHhh
Q 021221 162 FYSDVT 167 (316)
Q Consensus 162 fi~~~~ 167 (316)
|.-+--
T Consensus 93 wwprWq 98 (105)
T 1t4y_A 93 QLPQWL 98 (105)
T ss_dssp HHHHHH
T ss_pred HhHHHH
Confidence 876543
No 418
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=93.05 E-value=0.013 Score=46.72 Aligned_cols=28 Identities=14% Similarity=-0.078 Sum_probs=23.3
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATA 218 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~ 218 (316)
+.+++.| ++ +||++|+.. .|.+.+++..
T Consensus 39 k~vlv~F-~a--~~C~~C~~~--~~~l~~l~~~ 66 (164)
T 2h30_A 39 KPTLIKF-WA--SWCPLCLSE--LGQAEKWAQD 66 (164)
T ss_dssp SCEEEEE-CC--TTCHHHHHH--HHHHHHHHTC
T ss_pred CEEEEEE-EC--CCCHHHHHH--HHHHHHHHHH
Confidence 4467888 88 999999999 8888888765
No 419
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=93.03 E-value=0.021 Score=45.82 Aligned_cols=27 Identities=11% Similarity=0.080 Sum_probs=22.2
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALAT 217 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~ 217 (316)
+.+++.| ++ +||++|+.+ .|.+.+++.
T Consensus 52 k~vll~F-~a--~~C~~C~~~--~~~l~~l~~ 78 (168)
T 2b1k_A 52 KPVLLNV-WA--TWCPTCRAE--HQYLNQLSA 78 (168)
T ss_dssp SCEEEEE-EC--TTCHHHHHH--HHHHHHHHH
T ss_pred CEEEEEE-EC--CCCHHHHHH--HHHHHHHHH
Confidence 3467777 88 999999999 888888875
No 420
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=92.95 E-value=0.013 Score=46.22 Aligned_cols=29 Identities=7% Similarity=-0.061 Sum_probs=24.4
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAF 219 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f 219 (316)
+.+++.| ++ +||++|+.. .|.+..++..|
T Consensus 25 k~vlv~F-~a--~wC~~C~~~--~~~l~~l~~~~ 53 (151)
T 3raz_A 25 PVRIVNL-WA--TWCGPCRKE--MPAMSKWYKAQ 53 (151)
T ss_dssp SEEEEEE-EC--TTCHHHHHH--HHHHHHHHHTS
T ss_pred CEEEEEE-Ec--CcCHHHHHH--HHHHHHHHHHh
Confidence 3467778 89 999999999 89999988776
No 421
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=91.76 E-value=0.022 Score=44.11 Aligned_cols=28 Identities=7% Similarity=0.056 Sum_probs=22.2
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHH
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAF 219 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f 219 (316)
.+++.| ++ +||++|+.. .|.+..++..|
T Consensus 28 ~vll~F-~a--~wC~~C~~~--~~~l~~~~~~~ 55 (143)
T 2lus_A 28 IIGFYF-SA--HWCPPCRGF--TPILADMYSEL 55 (143)
Confidence 467778 88 999999998 77777776655
No 422
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=92.10 E-value=0.015 Score=44.96 Aligned_cols=29 Identities=10% Similarity=0.098 Sum_probs=24.1
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAF 219 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f 219 (316)
+.+++.| ++ +||++|+.+ .|.+..++..|
T Consensus 35 k~~ll~f-~~--~~C~~C~~~--~~~l~~~~~~~ 63 (145)
T 3erw_A 35 QKTILHF-WT--SWCPPCKKE--LPQFQSFYDAH 63 (145)
T ss_dssp SEEEEEE-EC--SSCHHHHHH--HHHHHHHHHHC
T ss_pred CEEEEEE-EC--CCCHHHHHH--HHHHHHHHHHc
Confidence 3467778 88 999999999 88998888765
No 423
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=91.44 E-value=0.15 Score=45.03 Aligned_cols=30 Identities=7% Similarity=0.121 Sum_probs=25.8
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHH
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSL 109 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~ 109 (316)
+++.+++.|.-|.||+|+++.+.+++..+.
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~ 175 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLKE 175 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHHH
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhhC
Confidence 467899999999999999999999965543
No 424
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=91.43 E-value=0.25 Score=40.73 Aligned_cols=41 Identities=17% Similarity=0.108 Sum_probs=31.8
Q ss_pred CCCeEEEEEEcCCChHHHhhhHHHHHHHHHc-CCCcEEEEEe
Q 021221 80 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLY-SSIPHFAIEE 120 (316)
Q Consensus 80 ~~~~vlV~Fya~WC~~Ck~~~p~~~~la~~~-~~~~~v~~~~ 120 (316)
+.+.+||.|.-..||+|+++.+.+.++.+++ ++.+.+..-+
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~ 54 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRL 54 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence 4578899999999999999999988876665 6655555443
No 425
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=91.19 E-value=0.033 Score=39.20 Aligned_cols=40 Identities=10% Similarity=-0.027 Sum_probs=29.8
Q ss_pred ccCCcccCChhhhhchHHHHHHHHHH-------------------HHHHhH--HhhhhhHhHhhccc
Q 021221 194 SCPFSWARSPENLLQQETYLALATAF-------------------VLLRLV--YIFLPTLLIFAQFT 239 (316)
Q Consensus 194 ~~~~pw~~~~~~~l~~~~~~~lA~~f-------------------~~~~~~--i~~~Ptl~~~~~~~ 239 (316)
++ |||++|+++ .+.+..++..+ +..+++ +.++|++ |.+|.
T Consensus 7 ~~--~~C~~C~~~--~~~l~~l~~~~~~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~ 67 (85)
T 1ego_A 7 GR--SGCPYCVRA--KDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQ 67 (85)
T ss_dssp CC--TTSTHHHHH--HHHHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTE
T ss_pred eC--CCCCCHHHH--HHHHHHHHhcCCCceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCE
Confidence 66 999999999 88888887653 124566 7888987 45555
No 426
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=90.83 E-value=0.027 Score=44.29 Aligned_cols=27 Identities=15% Similarity=0.108 Sum_probs=21.3
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALAT 217 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~ 217 (316)
+.+++.| ++ +||++|+.+ .|.+..++.
T Consensus 43 k~~ll~f-~~--~~C~~C~~~--~~~l~~l~~ 69 (156)
T 1kng_A 43 KVSLVNV-WA--SWCVPCHDE--APLLTELGK 69 (156)
T ss_dssp SCEEEEE-EC--TTCHHHHHH--HHHHHHHTT
T ss_pred CEEEEEE-Ec--ccCHhHHHH--HHHHHHHHh
Confidence 3456777 88 999999998 888887753
No 427
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=90.59 E-value=0.045 Score=43.44 Aligned_cols=30 Identities=7% Similarity=0.102 Sum_probs=24.9
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV 220 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~ 220 (316)
+.+++.| ++ +||++|+.. .|.+..++..|.
T Consensus 35 k~vlv~f-~~--~~C~~C~~~--~~~l~~l~~~~~ 64 (165)
T 3or5_A 35 KAYIVNF-FA--TWCPPCRSE--IPDMVQVQKTWA 64 (165)
T ss_dssp CEEEEEE-EC--TTSHHHHHH--HHHHHHHHHHHT
T ss_pred CEEEEEE-Ec--CcCHHHHHH--HHHHHHHHHHhc
Confidence 3467777 88 999999999 899999988773
No 428
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=90.55 E-value=0.013 Score=41.23 Aligned_cols=40 Identities=8% Similarity=-0.110 Sum_probs=30.2
Q ss_pred ccCCcccCChhhhhchHHHHHHHHHH-----------------HHHHhHHhhhhhHhHhhccc
Q 021221 194 SCPFSWARSPENLLQQETYLALATAF-----------------VLLRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 194 ~~~~pw~~~~~~~l~~~~~~~lA~~f-----------------~~~~~~i~~~Ptl~~~~~~~ 239 (316)
++ |||++|+.+ .+.+.+++..+ ...++++.+.||+.+ +|.
T Consensus 8 ~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~ 64 (80)
T 2k8s_A 8 YH--AGCPVCVSA--EQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGA 64 (80)
T ss_dssp EE--CSCHHHHHH--HHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTE
T ss_pred eC--CCCCchHHH--HHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCE
Confidence 77 999999999 88777765433 236788888999865 554
No 429
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=89.56 E-value=0.057 Score=42.77 Aligned_cols=29 Identities=10% Similarity=-0.051 Sum_probs=21.0
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHH-HHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLA-LATAF 219 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~-lA~~f 219 (316)
+.+++.| ++ +||++|+.. .|.+.. +...|
T Consensus 34 k~vll~f-~a--~~C~~C~~~--~~~l~~~l~~~~ 63 (159)
T 2ls5_A 34 KVVMLQF-TA--SWCGVCRKE--MPFIEKDIWLKH 63 (159)
Confidence 3467777 88 999999997 666665 55444
No 430
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=89.82 E-value=0.055 Score=42.30 Aligned_cols=30 Identities=7% Similarity=-0.024 Sum_probs=24.3
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV 220 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~ 220 (316)
+.+++.| ++ +||.+|+.. .|.+..++..|.
T Consensus 29 k~vll~f-~~--~~C~~C~~~--~~~l~~l~~~~~ 58 (152)
T 3gl3_A 29 SVVYLDF-WA--SWCGPCRQS--FPWMNQMQAKYK 58 (152)
T ss_dssp SEEEEEE-EC--TTCTHHHHH--HHHHHHHHHHHG
T ss_pred CEEEEEE-EC--CcCHHHHHH--HHHHHHHHHHhh
Confidence 3456777 88 999999999 888888888763
No 431
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=89.21 E-value=0.17 Score=49.48 Aligned_cols=59 Identities=12% Similarity=0.312 Sum_probs=38.4
Q ss_pred EEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCC----hhhHhhcCCCccceEEEEeCcee
Q 021221 85 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIR----PSILSKYGVHGFPTLFLLNSSMR 147 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~----~~l~~~~~I~~~Pti~l~~g~~~ 147 (316)
++.|..+|||+|++.+..+++..-.| ..+.++..+.. ..+.+..|...+|.++ ++|+.+
T Consensus 20 v~vy~~~~Cp~C~~~k~~L~~~~i~~---~~~dv~~~~~~~~~~~~l~~~~g~~tvP~v~-i~g~~i 82 (598)
T 2x8g_A 20 VILFSKTTCPYCKKVKDVLAEAKIKH---ATIELDQLSNGSAIQKCLASFSKIETVPQMF-VRGKFI 82 (598)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCCC---EEEEGGGSTTHHHHHHHTHHHHSCCCSCEEE-ETTEEE
T ss_pred EEEEECCCChhHHHHHHHHHHCCCCc---EEEEcccCcchHHHHHHHHHHhCCceeCEEE-ECCEEE
Confidence 77899999999999999988753322 23333221111 2344457889999883 376554
No 432
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=88.62 E-value=0.82 Score=34.92 Aligned_cols=50 Identities=18% Similarity=0.293 Sum_probs=30.2
Q ss_pred CCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCCCh----hhHhhcCCCccceEEEEeCce
Q 021221 91 SWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRP----SILSKYGVHGFPTLFLLNSSM 146 (316)
Q Consensus 91 ~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~~~----~l~~~~~I~~~Pti~l~~g~~ 146 (316)
|.||+|++....++.. ++..+...+.+.++ .+.+.-|-+.+|.+++ +|+-
T Consensus 33 P~C~fc~~ak~lL~~~-----gv~~~~~~~v~~~~~~r~~l~~~sg~~TvPqIFI-~g~~ 86 (118)
T 2wul_A 33 PQCGFSNAVVQILRLH-----GVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYL-NGEF 86 (118)
T ss_dssp BSSHHHHHHHHHHHHT-----TCCSCEEEETTSCHHHHHHHHHHHTCCSSCEEEE-TTEE
T ss_pred CCCHHHHHHHHHHHHh-----CCcCeEeecccCCHHHHHHHHHhccCCCCCeEeE-CCEE
Confidence 6799999999887654 22112223333333 3455557778888854 6643
No 433
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=88.32 E-value=0.082 Score=41.76 Aligned_cols=28 Identities=4% Similarity=-0.161 Sum_probs=23.0
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHH
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAF 219 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f 219 (316)
.+++.| ++ +||++|... .|.+..++..|
T Consensus 37 ~vll~F-~a--~wC~~C~~~--~~~l~~l~~~~ 64 (152)
T 2lrt_A 37 VVLIDF-TV--YNNAMSAAH--NLALRELYNKY 64 (152)
T ss_dssp EEEEEE-EC--TTCHHHHHH--HHHHHHHHHHH
T ss_pred EEEEEE-Ec--CCChhhHHH--HHHHHHHHHHh
Confidence 456777 88 999999998 88888887766
No 434
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=86.85 E-value=0.11 Score=40.73 Aligned_cols=29 Identities=10% Similarity=0.108 Sum_probs=23.8
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAF 219 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f 219 (316)
+.+++.| ++ +||++|+.. .|.+..++..|
T Consensus 29 k~vll~f-~~--~~C~~C~~~--~~~l~~~~~~~ 57 (154)
T 3kcm_A 29 QVVIVNF-WA--TWCPPCREE--IPSMMRLNAAM 57 (154)
T ss_dssp SEEEEEE-EC--TTCHHHHHH--HHHHHHHHHHT
T ss_pred CEEEEEE-EC--CCCHHHHHH--HHHHHHHHHHh
Confidence 3466777 88 999999999 88888887776
No 435
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=86.71 E-value=0.18 Score=38.79 Aligned_cols=56 Identities=16% Similarity=0.091 Sum_probs=33.0
Q ss_pred EEEEEEcCCChHH------HhhhHHHHHHHHHcCCCcEEEEEeCCCC----hhhHhhc--------CCCccceEEEEeCc
Q 021221 84 VAVLFYASWCPFS------RNFRPSFSVLSSLYSSIPHFAIEESAIR----PSILSKY--------GVHGFPTLFLLNSS 145 (316)
Q Consensus 84 vlV~Fya~WC~~C------k~~~p~~~~la~~~~~~~~v~~~~~~~~----~~l~~~~--------~I~~~Pti~l~~g~ 145 (316)
+++.|.++.||.| ++....|+. .++.+-.+ |.+.+ .++.++. |...+|.|++ ++.
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~lL~~-----kgV~feEi-dI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi-~~~ 73 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLGFLEA-----NKIGFEEK-DIAANEENRKWMRENVPENSRPATGYPLPPQIFN-ESQ 73 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHHHHH-----TTCCEEEE-ECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEEE-TTE
T ss_pred CEEEEecCCCCCccchHHHHHHHHHHHH-----CCCceEEE-ECCCCHHHHHHHHHhccccccccCCCcCCCEEEE-CCE
Confidence 4778899999999 455544443 23433333 33333 3455666 7777886654 554
Q ss_pred e
Q 021221 146 M 146 (316)
Q Consensus 146 ~ 146 (316)
.
T Consensus 74 ~ 74 (121)
T 1u6t_A 74 Y 74 (121)
T ss_dssp E
T ss_pred E
Confidence 3
No 436
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=85.45 E-value=0.39 Score=39.48 Aligned_cols=37 Identities=16% Similarity=0.252 Sum_probs=30.4
Q ss_pred hhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHHHHH
Q 021221 126 SILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFY 163 (316)
Q Consensus 126 ~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~fi 163 (316)
..++++||+|+||+++ ||+......|..+.+++.++|
T Consensus 145 ~~a~~~GV~gtPtf~i-ng~~~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 145 KYARQNGIHVSPTFMI-NGLVQPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp HHHHHHTCCSSSEEEE-TTEECTTCCTTSCHHHHHHHH
T ss_pred HHHHHCCCCccCEEEE-CCEEccCCCCCCCHHHHHHHh
Confidence 5678899999999986 887665667888999888876
No 437
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=85.33 E-value=0.23 Score=45.56 Aligned_cols=29 Identities=7% Similarity=-0.158 Sum_probs=24.1
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAF 219 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f 219 (316)
+.+++.| ++ +||.+|+.+ .|.+.+++..|
T Consensus 83 K~vLl~F-~a--twC~~C~~~--~p~L~~l~~~~ 111 (352)
T 2hyx_A 83 KVVLIDF-WA--YSCINCQRA--IPHVVGWYQAY 111 (352)
T ss_dssp SEEEEEE-EC--TTCHHHHHH--HHHHHHHHHHH
T ss_pred CEEEEEE-EC--CCChhHHHH--HHHHHHHHHHh
Confidence 3467778 89 999999998 88888888776
No 438
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=84.96 E-value=0.29 Score=37.59 Aligned_cols=29 Identities=10% Similarity=0.119 Sum_probs=24.6
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAF 219 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f 219 (316)
+.+++.| ++ +||++|+.. .|.+..++..|
T Consensus 34 k~vll~F-~~--~~C~~C~~~--~~~l~~l~~~~ 62 (148)
T 3fkf_A 34 RYLLLNF-WA--SWCDPQPEA--NAELKRLNKEY 62 (148)
T ss_dssp SEEEEEE-EC--GGGCCCHHH--HHHHHHHHHHT
T ss_pred cEEEEEE-EC--CCCHHHHHH--hHHHHHHHHHh
Confidence 4467778 88 999999999 88998888877
No 439
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=84.93 E-value=0.21 Score=40.08 Aligned_cols=50 Identities=12% Similarity=-0.023 Sum_probs=34.2
Q ss_pred ccCCCccccccCCcccCChhhhhc----hHHHHHH-HHHH--------------HHHHhHHhhhhhHhHhhc
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQ----QETYLAL-ATAF--------------VLLRLVYIFLPTLLIFAQ 237 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~----~~~~~~l-A~~f--------------~~~~~~i~~~Ptl~~~~~ 237 (316)
.+.+++.| ++ +||..|+.|-+ .|...++ ...| +..+|++.++|++.++-.
T Consensus 42 ~K~vlvd~-~a--~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~ 110 (153)
T 2dlx_A 42 NKWLMINI-QN--VQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDP 110 (153)
T ss_dssp TCEEEEEE-EC--SCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECT
T ss_pred CCeEEEEE-EC--CCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeC
Confidence 34578888 99 99999999821 1333332 2233 237899999999999944
No 440
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=83.87 E-value=0.081 Score=38.90 Aligned_cols=44 Identities=11% Similarity=-0.133 Sum_probs=30.7
Q ss_pred CccccccCCcccCChhhhhchHHHHHHHHH---H-----------------HHHHhHHhhhhhHhHhhccc
Q 021221 189 NTEEESCPFSWARSPENLLQQETYLALATA---F-----------------VLLRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 189 ~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~---f-----------------~~~~~~i~~~Ptl~~~~~~~ 239 (316)
++.| ++ |||++|+++ .+.+..++.. | +..++++.++|++ |.+|.
T Consensus 14 v~~f-~~--~~C~~C~~~--~~~L~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i--~~~g~ 77 (105)
T 1kte_A 14 VVVF-IK--PTCPFCRKT--QELLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLTGARTVPRV--FIGKE 77 (105)
T ss_dssp EEEE-EC--SSCHHHHHH--HHHHHHSCBCTTSEEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE--EETTE
T ss_pred EEEE-Ec--CCCHhHHHH--HHHHHHcCCCCCccEEEEccCCCCHHHHHHHHHHHhCCCCcCeE--EECCE
Confidence 4455 77 999999999 8777776544 2 2345677788987 44554
No 441
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=82.85 E-value=0.3 Score=37.64 Aligned_cols=30 Identities=17% Similarity=0.165 Sum_probs=24.8
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV 220 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~ 220 (316)
+.+++.| ++ +||++|+.. .|.+.+++..|.
T Consensus 29 k~vll~F-~a--~wC~~C~~~--~~~l~~l~~~~~ 58 (144)
T 1i5g_A 29 KTVFFYF-SA--SWCPPSRAF--TPQLIDFYKAHA 58 (144)
T ss_dssp SEEEEEE-EC--TTCHHHHHH--HHHHHHHHHHHT
T ss_pred CEEEEEE-EC--CCCHHHHHH--HHHHHHHHHHhc
Confidence 3467777 89 999999999 899988887765
No 442
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=82.17 E-value=0.33 Score=37.56 Aligned_cols=30 Identities=17% Similarity=0.181 Sum_probs=24.8
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV 220 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~ 220 (316)
+.+++.| ++ +||++|+.. .|.+..++..|.
T Consensus 29 k~vll~F-~a--~wC~~C~~~--~p~l~~l~~~~~ 58 (146)
T 1o8x_A 29 KLVFFYF-SA--SWCPPARGF--TPQLIEFYDKFH 58 (146)
T ss_dssp CEEEEEE-EC--TTCHHHHHH--HHHHHHHHHHHT
T ss_pred CEEEEEE-Ec--cCCHHHHHH--HHHHHHHHHHhh
Confidence 3467777 89 999999999 889988887765
No 443
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=81.71 E-value=0.4 Score=36.73 Aligned_cols=30 Identities=3% Similarity=-0.186 Sum_probs=24.5
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV 220 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~ 220 (316)
+.+++.| ++ +||++|+.. .|.+..++..|.
T Consensus 30 k~~lv~f-~~--~~C~~C~~~--~~~l~~l~~~~~ 59 (148)
T 2b5x_A 30 KPTLIHF-WS--ISCHLCKEA--MPQVNEFRDKYQ 59 (148)
T ss_dssp SCEEEEE-EC--TTCHHHHHH--HHHHHHHHHHHT
T ss_pred CEEEEEE-Ec--CCCHHHHHH--hHHHHHHHHHhc
Confidence 3456777 88 999999999 888888887763
No 444
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=81.52 E-value=0.38 Score=37.04 Aligned_cols=31 Identities=6% Similarity=-0.173 Sum_probs=25.0
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHH---HHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLA---LATAFVL 221 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~---lA~~f~~ 221 (316)
+.+++.| ++ +||++|+.. .|.+.. +...|..
T Consensus 32 k~vll~F-~a--~wC~~C~~~--~~~l~~~~~l~~~~~~ 65 (142)
T 3eur_A 32 EYTLLFI-NN--PGCHACAEM--IEGLKASPVINGFTAA 65 (142)
T ss_dssp SEEEEEE-CC--SSSHHHHHH--HHHHHHCHHHHHHHHT
T ss_pred CEEEEEE-EC--CCCccHHHH--HHHHhhhHHHHHHhcc
Confidence 3466777 89 999999999 888888 7877753
No 445
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=80.91 E-value=1.2 Score=33.50 Aligned_cols=21 Identities=19% Similarity=0.200 Sum_probs=18.2
Q ss_pred EEEEEcCCChHHHhhhHHHHH
Q 021221 85 AVLFYASWCPFSRNFRPSFSV 105 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~~p~~~~ 105 (316)
++.|+.|+|+.|++....+++
T Consensus 2 i~iY~~~~C~~C~kak~~L~~ 22 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE 22 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 457889999999999988876
No 446
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=80.89 E-value=0.4 Score=36.86 Aligned_cols=30 Identities=13% Similarity=0.047 Sum_probs=24.6
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV 220 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~ 220 (316)
+.+++.| ++ +||++|+.. .|.+.+++..|.
T Consensus 29 k~vll~F-~a--~wC~~C~~~--~~~l~~l~~~~~ 58 (144)
T 1o73_A 29 KTVFLYF-SA--SWCPPCRGF--TPVLAEFYEKHH 58 (144)
T ss_dssp CEEEEEE-EC--TTCHHHHHH--HHHHHHHHHHHT
T ss_pred CEEEEEE-EC--cCCHHHHHH--HHHHHHHHHHhc
Confidence 3467777 88 999999999 888888887764
No 447
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=80.73 E-value=0.4 Score=38.33 Aligned_cols=30 Identities=13% Similarity=0.070 Sum_probs=25.3
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV 220 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~ 220 (316)
+.+++.| ++ +||++|++. .|.+.+++..|.
T Consensus 49 k~vll~F-~a--~wC~~C~~~--~p~l~~l~~~~~ 78 (165)
T 3s9f_A 49 KTVFFYF-SA--SWCPPCRGF--TPQLVEFYEKHH 78 (165)
T ss_dssp SEEEEEE-EC--TTCHHHHHH--HHHHHHHHHHHT
T ss_pred CEEEEEE-EC--CcChhHHHH--HHHHHHHHHHhc
Confidence 3467778 89 999999999 899999888775
No 448
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=80.56 E-value=0.58 Score=35.83 Aligned_cols=30 Identities=7% Similarity=-0.367 Sum_probs=24.7
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV 220 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~ 220 (316)
+.+++.| ++ +||++|+.. .|.+..+...|.
T Consensus 32 k~vll~f-~~--~~C~~C~~~--~~~l~~l~~~~~ 61 (148)
T 3hcz_A 32 KYTILFF-WD--SQCGHCQQE--TPKLYDWWLKNR 61 (148)
T ss_dssp SEEEEEE-EC--GGGCTTCSH--HHHHHHHHHHHG
T ss_pred CEEEEEE-EC--CCCccHHHH--HHHHHHHHHHhc
Confidence 3467777 88 999999999 889998888774
No 449
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=80.49 E-value=1.5 Score=36.20 Aligned_cols=40 Identities=23% Similarity=0.315 Sum_probs=32.5
Q ss_pred hhhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHHHHHHHhhC
Q 021221 125 PSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDVTA 168 (316)
Q Consensus 125 ~~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~fi~~~~~ 168 (316)
.+.+.++||.|+||+++ +|+ .+.|..+.+.|.+.|.+...
T Consensus 157 ~~~a~~~Gv~G~Ptfvi-~g~---~~~G~~~~~~l~~~l~~~~~ 196 (203)
T 2imf_A 157 THAAIERKVFGVPTMFL-GDE---MWWGNDRLFMLESAMGRLCR 196 (203)
T ss_dssp HHHHHHTTCCSSSEEEE-TTE---EEESGGGHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCcCCEEEE-CCE---EEECCCCHHHHHHHHhcccc
Confidence 35678899999999877 774 57899899999999987653
No 450
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=80.41 E-value=0.72 Score=35.85 Aligned_cols=30 Identities=13% Similarity=-0.155 Sum_probs=24.3
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV 220 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~ 220 (316)
+.+++.| ++ +||++|+.. .|.+..++..|.
T Consensus 30 k~vll~F-~a--~~C~~C~~~--~~~l~~l~~~~~ 59 (152)
T 2lrn_A 30 KYVLVDF-WF--AGCSWCRKE--TPYLLKTYNAFK 59 (152)
T ss_dssp SEEEEEE-EC--TTCTTHHHH--HHHHHHHHHHHT
T ss_pred CEEEEEE-EC--CCChhHHHH--HHHHHHHHHHhc
Confidence 3457777 88 999999998 888888887763
No 451
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=79.61 E-value=1.4 Score=34.09 Aligned_cols=22 Identities=18% Similarity=0.270 Sum_probs=18.9
Q ss_pred EEEEEcCCChHHHhhhHHHHHH
Q 021221 85 AVLFYASWCPFSRNFRPSFSVL 106 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~~p~~~~l 106 (316)
++.|+.|+|+.|++....+++.
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~ 24 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEH 24 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEeCCCChHHHHHHHHHHHc
Confidence 5678999999999999888863
No 452
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=79.57 E-value=0.68 Score=35.83 Aligned_cols=28 Identities=4% Similarity=-0.179 Sum_probs=22.7
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHH
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAF 219 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f 219 (316)
.+++.| ++ +||++|+.. .|.+..++..|
T Consensus 30 ~~lv~f-~~--~~C~~C~~~--~~~l~~l~~~~ 57 (153)
T 2l5o_A 30 VTLINF-WF--PSCPGCVSE--MPKIIKTANDY 57 (153)
T ss_dssp EEEEEE-EC--TTCTTHHHH--HHHHHHHHHHG
T ss_pred EEEEEE-EC--CCCccHHHH--HHHHHHHHHHh
Confidence 356777 88 999999998 88888887765
No 453
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=78.72 E-value=0.65 Score=36.61 Aligned_cols=30 Identities=10% Similarity=0.007 Sum_probs=24.4
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV 220 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~ 220 (316)
+.+++.| ++ +||++|+.. .|.+..+...|.
T Consensus 38 k~~lv~F-~~--~~C~~C~~~--~~~l~~l~~~~~ 67 (165)
T 3ha9_A 38 DVVILWF-MA--AWCPSCVYM--ADLLDRLTEKYR 67 (165)
T ss_dssp SEEEEEE-EC--TTCTTHHHH--HHHHHHHHHHCT
T ss_pred CEEEEEE-EC--CCCcchhhh--HHHHHHHHHHcC
Confidence 4467778 88 999999999 888888887664
No 454
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=78.65 E-value=1.5 Score=33.20 Aligned_cols=22 Identities=9% Similarity=0.067 Sum_probs=19.0
Q ss_pred EEEEEcCCChHHHhhhHHHHHH
Q 021221 85 AVLFYASWCPFSRNFRPSFSVL 106 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~~p~~~~l 106 (316)
++.|+.|+|+.|++....+++.
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~ 28 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH 28 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc
Confidence 5678899999999999888874
No 455
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.38 E-value=0.26 Score=38.05 Aligned_cols=43 Identities=9% Similarity=-0.016 Sum_probs=29.7
Q ss_pred ccccccCCcccCChhhhhchHHHHHHHHHH-----------------HHHHhHHhhhhhHhHhhccc
Q 021221 190 TEEESCPFSWARSPENLLQQETYLALATAF-----------------VLLRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 190 v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f-----------------~~~~~~i~~~Ptl~~~~~~~ 239 (316)
+.| +. |||++|+++ .+.+..+...| +..++++..+|++ |.+|.
T Consensus 30 vvf-~~--~~Cp~C~~~--~~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l--~i~G~ 89 (130)
T 2cq9_A 30 VIF-SK--TSCSYCTMA--KKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRI--FVNGT 89 (130)
T ss_dssp EEE-EC--SSCSHHHHH--HHHHHHHTCCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEE--EETTE
T ss_pred EEE-Ec--CCChHHHHH--HHHHHHcCCCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEE--EECCE
Confidence 335 77 999999999 88777765443 2245677788887 34554
No 456
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=77.19 E-value=0.6 Score=36.16 Aligned_cols=29 Identities=10% Similarity=-0.046 Sum_probs=23.8
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAF 219 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f 219 (316)
+.+++.| ++ +||++|+.. .|.+..++..|
T Consensus 27 k~vlv~F-~~--~~C~~C~~~--~~~l~~~~~~~ 55 (151)
T 2f9s_A 27 KGVFLNF-WG--TWCEPCKKE--FPYMANQYKHF 55 (151)
T ss_dssp SEEEEEE-EC--TTCHHHHHH--HHHHHHHHHHH
T ss_pred CEEEEEE-EC--CCCHHHHHH--HHHHHHHHHHh
Confidence 3456777 88 999999999 88888888776
No 457
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=76.68 E-value=3.4 Score=35.27 Aligned_cols=41 Identities=12% Similarity=0.260 Sum_probs=33.6
Q ss_pred hhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHHHHHHHhhCC
Q 021221 126 SILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDVTAS 169 (316)
Q Consensus 126 ~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~fi~~~~~~ 169 (316)
+.+.++||.|+||+++ +|+ ..+.|..+.+.|.+.|++....
T Consensus 174 ~~a~~~Gv~GvPtfvv-~g~--~~v~Ga~~~e~~~~~i~~~~~~ 214 (239)
T 3gl5_A 174 REAAQLGATGVPFFVL-DRA--YGVSGAQPAEVFTQALTQAWGE 214 (239)
T ss_dssp HHHHHTTCCSSSEEEE-TTT--EEEESSCCHHHHHHHHHHHHHT
T ss_pred HHHHHCCCCeeCeEEE-CCc--EeecCCCCHHHHHHHHHHHHhh
Confidence 4567899999999986 775 3457999999999999998763
No 458
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=76.58 E-value=0.37 Score=39.61 Aligned_cols=38 Identities=8% Similarity=-0.158 Sum_probs=29.5
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHHHHHhHHhhhhh
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFVLLRLVYIFLPT 231 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~~~~~i~~~Pt 231 (316)
+..+|+| +. .||+||.++ .|.+..+...+ +..+..+|.
T Consensus 23 ~~~vvef-~d--~~Cp~C~~~--~~~~~~~~~~~---~v~~~~~p~ 60 (185)
T 3feu_A 23 MAPVTEV-FA--LSCGHCRNM--ENFLPVISQEA---GTDIGKMHI 60 (185)
T ss_dssp CCSEEEE-EC--TTCHHHHHH--GGGHHHHHHHH---TSCCEEEEC
T ss_pred CCEEEEE-EC--CCChhHHHh--hHHHHHHHHHh---CCeEEEEec
Confidence 4577888 88 999999999 89999998887 334444554
No 459
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=76.25 E-value=0.66 Score=37.40 Aligned_cols=31 Identities=3% Similarity=0.009 Sum_probs=25.1
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFVL 221 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~ 221 (316)
+.+++.| ++ +||.+|+.. .|.+..++..|..
T Consensus 60 k~vlv~F-~a--~~C~~C~~~--~~~l~~l~~~~~~ 90 (183)
T 3lwa_A 60 QVVILNA-WG--QWCAPCRSE--SDDLQIIHEELQA 90 (183)
T ss_dssp SEEEEEE-EC--TTCHHHHHH--HHHHHHHHHHHHH
T ss_pred CEEEEEE-EC--CcCHhHHHH--HHHHHHHHHHHHh
Confidence 3456777 88 999999999 8888888887754
No 460
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=75.61 E-value=0.54 Score=36.74 Aligned_cols=30 Identities=10% Similarity=-0.234 Sum_probs=23.8
Q ss_pred cCCCccccccCCcccCChhh-hhchHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPEN-LLQQETYLALATAFV 220 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~-~l~~~~~~~lA~~f~ 220 (316)
+.+++.| ++ +||++|+. + .|.+..++..|.
T Consensus 31 k~vlv~F-~a--~~C~~C~~e~--~~~l~~l~~~~~ 61 (160)
T 3lor_A 31 KVVVVEV-FQ--MLCPGCVNHG--VPQAQKIHRMID 61 (160)
T ss_dssp SEEEEEE-EC--TTCHHHHHTH--HHHHHHHHHHSC
T ss_pred CEEEEEE-Ec--CCCcchhhhh--hHHHHHHHHHhC
Confidence 3467778 89 99999998 7 788888877764
No 461
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=75.20 E-value=2.2 Score=32.38 Aligned_cols=21 Identities=24% Similarity=0.382 Sum_probs=18.1
Q ss_pred EEEEEcCCChHHHhhhHHHHH
Q 021221 85 AVLFYASWCPFSRNFRPSFSV 105 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~~p~~~~ 105 (316)
+..|+.|+|+.|++....+++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~ 22 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNR 22 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHH
Confidence 467889999999999988875
No 462
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=75.07 E-value=0.97 Score=34.85 Aligned_cols=28 Identities=7% Similarity=0.080 Sum_probs=22.5
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHH
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAF 219 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f 219 (316)
.+++.| ++ +||.+|+.. .|.+..+...|
T Consensus 32 ~~lv~f-~~--~~C~~C~~~--~~~l~~l~~~~ 59 (152)
T 2lja_A 32 YIYIDV-WA--TWCGPCRGE--LPALKELEEKY 59 (152)
T ss_dssp EEEEEE-CC--SSCCGGGGT--HHHHHHHHHHS
T ss_pred EEEEEE-EC--CcCHhHHHH--hHHHHHHHHHh
Confidence 356777 88 999999998 88888877665
No 463
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=74.47 E-value=0.69 Score=35.34 Aligned_cols=30 Identities=0% Similarity=-0.165 Sum_probs=22.8
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHH---HHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLA---LATAFV 220 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~---lA~~f~ 220 (316)
+.+++.| ++ +||++|+.. .|.+.+ +...|.
T Consensus 28 k~vll~F-~a--~~C~~C~~~--~~~l~~~~~l~~~~~ 60 (142)
T 3ewl_A 28 QYTMLFF-YD--PDCSNCRKF--EKLFAEIPAFVEMVE 60 (142)
T ss_dssp SEEEEEE-CC--SSCHHHHHH--HHHHHTCHHHHHHHH
T ss_pred CEEEEEE-EC--CCCccHHHH--HHHHHHhHHHHHHhc
Confidence 3467777 88 999999998 777776 666654
No 464
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=74.38 E-value=0.86 Score=35.30 Aligned_cols=29 Identities=14% Similarity=-0.040 Sum_probs=24.5
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAF 219 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f 219 (316)
+.+++.| ++ +||++|+.. .|.+..++..|
T Consensus 31 k~vll~f-~~--~~C~~C~~~--~~~l~~l~~~~ 59 (154)
T 3ia1_A 31 KPAVIVF-WA--SWCTVCKAE--FPGLHRVAEET 59 (154)
T ss_dssp SSEEEEE-EC--TTCHHHHHH--HHHHHHHHHHH
T ss_pred CeEEEEE-Ec--ccChhHHHH--HHHHHHHHHHc
Confidence 4467777 88 999999999 89999988876
No 465
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=73.68 E-value=1.5 Score=33.16 Aligned_cols=30 Identities=23% Similarity=0.475 Sum_probs=26.8
Q ss_pred CeEEEEEEcCCChHHHhhhHHHHHHHHHcC
Q 021221 82 EYVAVLFYASWCPFSRNFRPSFSVLSSLYS 111 (316)
Q Consensus 82 ~~vlV~Fya~WC~~Ck~~~p~~~~la~~~~ 111 (316)
|.+++.|.-|-|+-|+.....+.++.++|+
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~ledeY~ 31 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEELKSEYD 31 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTTTTTEE
T ss_pred CceEEEeCCCccHHHHHHHHHHHHhhcccc
Confidence 568999999999999999999988887773
No 466
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=73.54 E-value=0.18 Score=37.94 Aligned_cols=45 Identities=11% Similarity=-0.145 Sum_probs=30.2
Q ss_pred CCccccccCCcccCChhhhhchHHHHHHHHH---H-----------------HHHHhHHhhhhhHhHhhccc
Q 021221 188 NNTEEESCPFSWARSPENLLQQETYLALATA---F-----------------VLLRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 188 ~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~---f-----------------~~~~~~i~~~Ptl~~~~~~~ 239 (316)
.++.| +. |||+.|+++ .+.+..++.. | +..++++.+.|++ |.+|.
T Consensus 20 ~vv~f-~~--~~Cp~C~~~--~~~L~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v--~i~g~ 84 (114)
T 2hze_A 20 KVTIF-VK--YTCPFCRNA--LDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGGKTVPRI--FFGKT 84 (114)
T ss_dssp CEEEE-EC--TTCHHHHHH--HHHHTTSCBCTTSEEEEEGGGSSSHHHHHHHHHHHHSCCSSCEE--EETTE
T ss_pred CEEEE-Ee--CCChhHHHH--HHHHHHcCCCcCceEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCE
Confidence 44556 77 999999998 7766665444 2 3356777788886 33554
No 467
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=73.16 E-value=0.29 Score=38.78 Aligned_cols=43 Identities=9% Similarity=-0.016 Sum_probs=30.0
Q ss_pred ccccccCCcccCChhhhhchHHHHHHHHHH-----------------HHHHhHHhhhhhHhHhhccc
Q 021221 190 TEEESCPFSWARSPENLLQQETYLALATAF-----------------VLLRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 190 v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f-----------------~~~~~~i~~~Ptl~~~~~~~ 239 (316)
+.| +. |||++|+++ .+.+..++..| +..++++.++|++ |.+|.
T Consensus 52 vvf-~~--~~Cp~C~~~--k~~L~~~~i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~i--fi~G~ 111 (146)
T 2ht9_A 52 VIF-SK--TSCSYCTMA--KKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRI--FVNGT 111 (146)
T ss_dssp EEE-EC--TTCHHHHHH--HHHHHHHTCCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEE--EETTE
T ss_pred EEE-EC--CCChhHHHH--HHHHHHcCCCeEEEECccCcCCHHHHHHHHHHhCCCCcCeE--EECCE
Confidence 335 77 999999999 88777765444 2245677788887 34554
No 468
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=72.62 E-value=2.9 Score=34.57 Aligned_cols=36 Identities=11% Similarity=0.329 Sum_probs=29.5
Q ss_pred hhHhhcCCCccceEEEEeCceeEEEeCCCCHHHHHHHHHH
Q 021221 126 SILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSD 165 (316)
Q Consensus 126 ~l~~~~~I~~~Pti~l~~g~~~~~~~G~~~~~~l~~fi~~ 165 (316)
+.+.++||.|+||+++ ||+ .+.|....+.|.++|.+
T Consensus 164 ~~a~~~Gv~GvPtfvv-~g~---~~~G~~~~~~l~~~l~~ 199 (202)
T 3fz5_A 164 EDAVARGIFGSPFFLV-DDE---PFWGWDRMEMMAEWIRT 199 (202)
T ss_dssp HHHHHTTCCSSSEEEE-TTE---EEESGGGHHHHHHHHHT
T ss_pred HHHHHCCCCcCCEEEE-CCE---EEecCCCHHHHHHHHhc
Confidence 4567889999999987 764 67898889999888864
No 469
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=72.57 E-value=0.18 Score=41.80 Aligned_cols=30 Identities=17% Similarity=0.029 Sum_probs=24.4
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV 220 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~ 220 (316)
...+++| +. +||+||+++ .|.+..+...+.
T Consensus 25 ~v~vv~f-~d--~~Cp~C~~~--~~~l~~~~~~~~ 54 (193)
T 3hz8_A 25 KVEVLEF-FG--YFCPHCAHL--EPVLSKHAKSFK 54 (193)
T ss_dssp SEEEEEE-EC--TTCHHHHHH--HHHHHHHHTTCC
T ss_pred CcEEEEE-EC--CCChhHHHH--HHHHHHHHHHCC
Confidence 3357788 88 999999999 888888877654
No 470
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=72.26 E-value=0.88 Score=33.94 Aligned_cols=28 Identities=14% Similarity=-0.030 Sum_probs=22.5
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATA 218 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~ 218 (316)
+.+++.| ++ +||++|+.. .+.+..++..
T Consensus 23 k~~lv~f-~~--~~C~~C~~~--~~~l~~~~~~ 50 (138)
T 4evm_A 23 KKVYLKF-WA--SWCSICLAS--LPDTDEIAKE 50 (138)
T ss_dssp SEEEEEE-CC--TTCHHHHHH--HHHHHHHHHT
T ss_pred CEEEEEE-Ec--CcCHHHHHH--HHHHHHHHHH
Confidence 3466777 88 999999999 8888887765
No 471
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=71.96 E-value=0.5 Score=34.79 Aligned_cols=38 Identities=8% Similarity=0.072 Sum_probs=25.7
Q ss_pred cccCChhhhhchHHHHHHHHHH--------------HHHHhHHhhhhhHhHhhccc
Q 021221 198 SWARSPENLLQQETYLALATAF--------------VLLRLVYIFLPTLLIFAQFT 239 (316)
Q Consensus 198 pw~~~~~~~l~~~~~~~lA~~f--------------~~~~~~i~~~Ptl~~~~~~~ 239 (316)
|||++|+++ .+.+..+...| +...+++.++|++ |.+|.
T Consensus 30 ~~C~~C~~~--~~~L~~~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v--~i~g~ 81 (105)
T 2yan_A 30 AKCGFSKQI--LEILNSTGVEYETFDILEDEEVRQGLKAYSNWPTYPQL--YVKGE 81 (105)
T ss_dssp BCTTHHHHH--HHHHHHHTCCCEEEEGGGCHHHHHHHHHHHTCCSSCEE--EETTE
T ss_pred CCCccHHHH--HHHHHHCCCCeEEEECCCCHHHHHHHHHHHCCCCCCeE--EECCE
Confidence 899999998 77777665443 1234566777887 45554
No 472
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=71.75 E-value=1.7 Score=35.02 Aligned_cols=31 Identities=6% Similarity=-0.148 Sum_probs=25.0
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHHHHH
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAFVLL 222 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~~ 222 (316)
.+++.| ++ +||+.|... .|.+.+++..|...
T Consensus 51 ~vlv~F-~a--twC~~C~~~--~p~l~~l~~~~~~~ 81 (181)
T 2p31_A 51 VSLVVN-VA--SECGFTDQH--YRALQQLQRDLGPH 81 (181)
T ss_dssp EEEEEE-EC--SSSTTHHHH--HHHHHHHHHHHGGG
T ss_pred EEEEEE-ec--cCCCCcHHH--HHHHHHHHHHhhcC
Confidence 356777 88 999999998 88888888887643
No 473
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=71.19 E-value=1.8 Score=33.97 Aligned_cols=31 Identities=10% Similarity=-0.166 Sum_probs=24.8
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFVL 221 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~ 221 (316)
+.+++.| ++ +||.+|... .|.+.+++..|..
T Consensus 33 k~vll~f-~a--~~C~~C~~~--~~~l~~l~~~~~~ 63 (170)
T 2p5q_A 33 KVLLIVN-VA--SKCGMTNSN--YAEMNQLYEKYKD 63 (170)
T ss_dssp SEEEEEE-EC--SSSTTHHHH--HHHHHHHHHHHGG
T ss_pred CEEEEEE-Ee--ccCCccHHH--HHHHHHHHHHhcc
Confidence 3456777 88 999999998 8888888877754
No 474
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=71.03 E-value=1.8 Score=34.78 Aligned_cols=31 Identities=10% Similarity=-0.144 Sum_probs=25.4
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHHHHH
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAFVLL 222 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~~ 222 (316)
.+++.| ++ +||+.|... .|.+..+...|...
T Consensus 40 ~vlv~F-~a--twC~~C~~~--~p~l~~l~~~~~~~ 70 (180)
T 3kij_A 40 VSLVVN-VA--SDCQLTDRN--YLGLKELHKEFGPS 70 (180)
T ss_dssp EEEEEE-EC--SSSTTHHHH--HHHHHHHHHHHTTT
T ss_pred EEEEEE-Ee--cCCCCcHHH--HHHHHHHHHHhccC
Confidence 456777 88 999999998 88999988887643
No 475
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=70.83 E-value=3.2 Score=31.48 Aligned_cols=22 Identities=14% Similarity=0.262 Sum_probs=18.5
Q ss_pred EEEEEcCCChHHHhhhHHHHHH
Q 021221 85 AVLFYASWCPFSRNFRPSFSVL 106 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~~p~~~~l 106 (316)
+..|+.|+|+.|++....+++-
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~~ 26 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDDL 26 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc
Confidence 5678899999999999888753
No 476
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=70.82 E-value=1.9 Score=33.85 Aligned_cols=31 Identities=6% Similarity=-0.089 Sum_probs=24.5
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFVL 221 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~ 221 (316)
+.+++.| ++ +||++|... .|.+.++...|..
T Consensus 32 k~vlv~f-~a--~~C~~C~~~--~~~l~~l~~~~~~ 62 (169)
T 2v1m_A 32 HVCLIVN-VA--CKCGATDKN--YRQLQEMHTRLVG 62 (169)
T ss_dssp SEEEEEE-EC--SSSTTHHHH--HHHHHHHHHHHGG
T ss_pred CEEEEEE-ee--ccCCchHHH--HHHHHHHHHHhhc
Confidence 3457777 88 999999988 8888888777754
No 477
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=70.52 E-value=0.84 Score=35.54 Aligned_cols=30 Identities=13% Similarity=-0.199 Sum_probs=23.5
Q ss_pred cCCCccccccCCcccCChhh-hhchHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPEN-LLQQETYLALATAFV 220 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~-~l~~~~~~~lA~~f~ 220 (316)
+.+++.| ++ +||++|+. . .|.+..++..|.
T Consensus 29 k~vlv~f-~a--~wC~~C~~~~--~~~l~~l~~~~~ 59 (158)
T 3eyt_A 29 KVIVIEA-FQ--MLCPGCVMHG--IPLAQKVRAAFP 59 (158)
T ss_dssp SEEEEEE-EC--TTCHHHHHTH--HHHHHHHHHHSC
T ss_pred CEEEEEE-EC--CcCcchhhhh--hHHHHHHHHHhC
Confidence 3467778 89 99999998 6 678888877664
No 478
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=69.98 E-value=2 Score=34.87 Aligned_cols=37 Identities=11% Similarity=-0.092 Sum_probs=28.5
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHHHHHhHHh
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFVLLRLVYI 227 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~~~~~i~ 227 (316)
+.+++.| ++ +||++|... .|.+.++...|....+.+.
T Consensus 47 k~vlv~F-~a--twC~~C~~~--~p~l~~l~~~~~~~~~~vi 83 (187)
T 3dwv_A 47 SPLLIYN-VA--SKCGYTKGG--YETATTLYNKYKSQGFTVL 83 (187)
T ss_dssp SCEEEEE-EC--CBCSCCTTH--HHHHHHHHHHHGGGTCEEE
T ss_pred CEEEEEE-ec--CCCCCcHHH--HHHHHHHHHHhhhCCeEEE
Confidence 3467777 88 999999998 8999999888865434443
No 479
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=69.58 E-value=0.91 Score=35.56 Aligned_cols=30 Identities=17% Similarity=0.074 Sum_probs=24.6
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV 220 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~ 220 (316)
+.+++.| ++ +||++|+.. .|.+..++..|.
T Consensus 42 k~vll~F-~~--~~C~~C~~~--~~~l~~~~~~~~ 71 (158)
T 3hdc_A 42 KIVLVNF-WA--SWCPYCRDE--MPSMDRLVKSFP 71 (158)
T ss_dssp SEEEEEE-EC--TTCHHHHHH--HHHHHHHHHHSS
T ss_pred CEEEEEE-EC--CcCHHHHHH--HHHHHHHHHHcc
Confidence 3456777 88 999999999 889999888773
No 480
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=69.17 E-value=0.93 Score=37.88 Aligned_cols=38 Identities=13% Similarity=-0.089 Sum_probs=28.7
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHHHHHHhHHhhh
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAFVLLRLVYIFL 229 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~~~~~i~~~ 229 (316)
.+++.| ++ .||+.|+.. .|.+.++...|....+.|.++
T Consensus 49 ~vlv~F-wa--twC~~C~~e--~p~l~~l~~~~~~~g~~vv~v 86 (208)
T 2f8a_A 49 VLLIEN-VA--SLGGTTVRD--YTQMNELQRRLGPRGLVVLGF 86 (208)
T ss_dssp EEEEEE-EC--SSSTTHHHH--HHHHHHHHHHHGGGTEEEEEE
T ss_pred EEEEEE-EC--CCCccHHHH--HHHHHHHHHHccCCCeEEEEE
Confidence 356777 89 999999998 888999888886544444444
No 481
>1wwj_A Circadian clock protein KAIB; 1.90A {Synechocystis SP} PDB: 1r5p_A 2qke_A 1vgl_A
Probab=68.47 E-value=2.9 Score=31.04 Aligned_cols=60 Identities=17% Similarity=0.186 Sum_probs=49.5
Q ss_pred CeEEEEEEcCCChHHHhhhHHHHHHHH-HcCCCcEEEEEeCCCChhhHhhcCCCccceEEE
Q 021221 82 EYVAVLFYASWCPFSRNFRPSFSVLSS-LYSSIPHFAIEESAIRPSILSKYGVHGFPTLFL 141 (316)
Q Consensus 82 ~~vlV~Fya~WC~~Ck~~~p~~~~la~-~~~~~~~v~~~~~~~~~~l~~~~~I~~~Pti~l 141 (316)
.+++..|-|.--+.+++....+.++-+ .+++...+.++|..+++++++.++|-.+||++-
T Consensus 7 ~~~L~LyVaG~tp~S~~ai~nL~~i~e~~l~~~y~LeVIDv~~~PelAe~~~IvAtPTLiK 67 (105)
T 1wwj_A 7 TYVLKLYVAGNTPNSVRALKMLKNILEQEFQGVYALKVIDVLKNPQLAEEDKILATPTLAK 67 (105)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCSCCTTCEEECHHHHGG
T ss_pred ceEEEEEEeCCCchHHHHHHHHHHHHHHhcCCCeEEEEEEcccCHhHHhHCCeEEechhhh
Confidence 456666777688889888888887654 456788899999999999999999999999873
No 482
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=66.80 E-value=3.6 Score=31.23 Aligned_cols=21 Identities=5% Similarity=0.100 Sum_probs=18.1
Q ss_pred EEEEEcCCChHHHhhhHHHHH
Q 021221 85 AVLFYASWCPFSRNFRPSFSV 105 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~~p~~~~ 105 (316)
+..|+.|+|+.|++....+++
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~ 26 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIE 26 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 567889999999999888775
No 483
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=66.28 E-value=1.2 Score=36.44 Aligned_cols=30 Identities=10% Similarity=-0.176 Sum_probs=24.7
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV 220 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~ 220 (316)
+.+++.| +. +||.+|+++ .|.+..+...+.
T Consensus 26 ~~~vv~f-~d--~~Cp~C~~~--~~~l~~l~~~~~ 55 (195)
T 3hd5_A 26 KIEVLEF-FA--YTCPHCAAI--EPMVEDWAKTAP 55 (195)
T ss_dssp CEEEEEE-EC--TTCHHHHHH--HHHHHHHHHTCC
T ss_pred CeEEEEE-EC--CCCccHHHh--hHHHHHHHHHCC
Confidence 3467788 88 999999999 899888877664
No 484
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=65.63 E-value=1 Score=37.79 Aligned_cols=28 Identities=21% Similarity=0.010 Sum_probs=21.9
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHHH
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALAT 217 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~ 217 (316)
.+.+++.| +. |||++|+++ .|.+..++.
T Consensus 86 ~k~~vv~F-~d--~~Cp~C~~~--~~~l~~l~~ 113 (216)
T 1eej_A 86 EKHVITVF-TD--ITCGYCHKL--HEQMADYNA 113 (216)
T ss_dssp CCEEEEEE-EC--TTCHHHHHH--HTTHHHHHH
T ss_pred CCEEEEEE-EC--CCCHHHHHH--HHHHHHHHh
Confidence 44567888 89 999999999 777776653
No 485
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=65.52 E-value=3 Score=33.77 Aligned_cols=31 Identities=13% Similarity=-0.122 Sum_probs=24.6
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFVL 221 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~ 221 (316)
+.+++.| ++ +||+.|... .|.+.++...|..
T Consensus 49 k~vll~F-~a--twC~~C~~~--~~~l~~l~~~~~~ 79 (190)
T 2vup_A 49 SPLLIYN-VA--SKCGYTKGG--YETATTLYNKYKS 79 (190)
T ss_dssp SCEEEEE-EC--SSSTTHHHH--HHHHHHHHHHHGG
T ss_pred CEEEEEE-ec--CCCCccHHH--HHHHHHHHHHHhc
Confidence 3456777 88 999999888 8888888877754
No 486
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=64.72 E-value=2.9 Score=33.57 Aligned_cols=31 Identities=10% Similarity=-0.050 Sum_probs=24.9
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHHHHH
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAFVLL 222 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~~ 222 (316)
.+++.| ++ +||+.|... .|.+.++...|...
T Consensus 49 ~vll~F-~a--twC~~C~~~--~~~l~~l~~~~~~~ 79 (183)
T 2obi_A 49 VCIVTN-VA--SQCGKTEVN--YTQLVDLHARYAEC 79 (183)
T ss_dssp EEEEEE-EC--SSSTTHHHH--HHHHHHHHHHHGGG
T ss_pred EEEEEE-eC--CCCCCcHHH--HHHHHHHHHHHhcC
Confidence 356777 88 999999998 88888888877643
No 487
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=64.62 E-value=0.88 Score=34.93 Aligned_cols=30 Identities=3% Similarity=-0.085 Sum_probs=23.0
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV 220 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~ 220 (316)
+.+++.| ++ +||++|+.. .|.+..+...|.
T Consensus 33 k~vll~F-~a--~wC~~C~~~--~~~l~~l~~~~~ 62 (143)
T 4fo5_A 33 RYTLLNF-WA--AYDAESRAR--NVQLANEVNKFG 62 (143)
T ss_dssp CEEEEEE-EC--TTCHHHHHH--HHHHHHHHTTSC
T ss_pred CEEEEEE-Ec--CcCHHHHHH--HHHHHHHHHHhC
Confidence 3456777 89 999999998 777777776553
No 488
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=64.00 E-value=3.1 Score=31.94 Aligned_cols=29 Identities=14% Similarity=0.142 Sum_probs=24.6
Q ss_pred cCCCccccccCCcccCC--hhhhhchHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARS--PENLLQQETYLALATAF 219 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~--~~~~l~~~~~~~lA~~f 219 (316)
+.+++.| ++ +||++ |+.. .|.+..+...|
T Consensus 34 k~vll~F-~a--~~C~~v~C~~~--~~~l~~l~~~~ 64 (150)
T 3fw2_A 34 KSLLINF-WA--SWNDSISQKQS--NSELREIYKKY 64 (150)
T ss_dssp SEEEEEE-EC--TTCCCHHHHHH--HHHHHHHHHHH
T ss_pred CEEEEEE-Ee--CCCCchHHHHH--HHHHHHHHHHh
Confidence 3467777 89 99999 9999 88999888877
No 489
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=63.64 E-value=2.8 Score=33.16 Aligned_cols=30 Identities=13% Similarity=-0.141 Sum_probs=23.8
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFVL 221 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~ 221 (316)
+.+++.| ++ +||+.|+ . .|.+.++...|..
T Consensus 33 k~vll~F-~a--~wC~~C~-~--~~~l~~l~~~~~~ 62 (171)
T 3cmi_A 33 KVVLIVN-VA--SKCGFTP-Q--YKELEALYKRYKD 62 (171)
T ss_dssp CEEEEEE-EE--SSSCCHH-H--HHHHHHHHHHHGG
T ss_pred CEEEEEE-Ee--cCCCcch-h--HHHHHHHHHHhcc
Confidence 3467777 88 9999999 7 7888888877754
No 490
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=63.42 E-value=0.54 Score=38.43 Aligned_cols=40 Identities=13% Similarity=0.059 Sum_probs=28.4
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHHHHHhHHhhhhh
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFVLLRLVYIFLPT 231 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~~~~~i~~~Pt 231 (316)
...+++| +. +||.+|.++ .|.+..+...+.. ++.+..+|.
T Consensus 26 ~~~i~~f-~d--~~Cp~C~~~--~~~l~~l~~~~~~-~v~~~~~p~ 65 (192)
T 3h93_A 26 KIEVVEL-FW--YGCPHCYAF--EPTIVPWSEKLPA-DVHFVRLPA 65 (192)
T ss_dssp SEEEEEE-EC--TTCHHHHHH--HHHHHHHHHTCCT-TEEEEEEEC
T ss_pred CCEEEEE-EC--CCChhHHHh--hHHHHHHHHhCCC-CeEEEEEeh
Confidence 3357778 88 999999999 8888888776543 334444453
No 491
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=63.10 E-value=2 Score=34.77 Aligned_cols=28 Identities=14% Similarity=0.220 Sum_probs=23.6
Q ss_pred CCccccccCCcccCChhhhhchHHHHHHHHHHH
Q 021221 188 NNTEEESCPFSWARSPENLLQQETYLALATAFV 220 (316)
Q Consensus 188 ~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~ 220 (316)
+++.| ++ +||++|+.. .|.+..+...|.
T Consensus 49 vlv~F-~a--~~C~~C~~~--~~~l~~l~~~~~ 76 (196)
T 2ywi_A 49 TVIMF-IC--NHCPFVKHV--QHELVRLANDYM 76 (196)
T ss_dssp EEEEE-CC--SSCHHHHHH--HHHHHHHHHHHG
T ss_pred EEEEE-eC--CCCccHHHH--HHHHHHHHHHHH
Confidence 67777 88 999999998 888888887764
No 492
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=62.53 E-value=8.5 Score=32.56 Aligned_cols=41 Identities=17% Similarity=0.330 Sum_probs=31.1
Q ss_pred hhHhhcCCCccceEEEE-eCceeEEEeCCCCHHHHHHHHHHhh
Q 021221 126 SILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVT 167 (316)
Q Consensus 126 ~l~~~~~I~~~Pti~l~-~g~~~~~~~G~~~~~~l~~fi~~~~ 167 (316)
+.+.++||.|+||+++= +|+ -..|.|....+.|.++|.+..
T Consensus 173 ~~a~~~Gv~GvPtfvv~~~g~-~~~f~G~drl~~l~~~L~~~~ 214 (234)
T 3rpp_A 173 EAACRYGAFGLPITVAHVDGQ-THMLFGSDRMELLAHLLGEKW 214 (234)
T ss_dssp HHHHHTTCSSSCEEEEEETTE-EEEEESSSCHHHHHHHHTCCC
T ss_pred HHHHHcCCCCCCEEEEeCCCC-cCceeCccCHHHHHHHhcccc
Confidence 45678899999999872 343 356889888988888886543
No 493
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=62.35 E-value=2 Score=34.50 Aligned_cols=29 Identities=7% Similarity=-0.028 Sum_probs=23.5
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHHH
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAFV 220 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~ 220 (316)
.+++.| ++ +||++|+.. .|.+..+...|.
T Consensus 62 ~vll~F-~a--~~C~~C~~~--~~~l~~l~~~~~ 90 (186)
T 1jfu_A 62 TLLVNL-WA--TWCVPCRKE--MPALDELQGKLS 90 (186)
T ss_dssp EEEEEE-EC--TTCHHHHHH--HHHHHHHHHHHC
T ss_pred EEEEEE-Ee--CCCHhHHHH--HHHHHHHHHHhc
Confidence 356777 88 999999998 888888877764
No 494
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=61.65 E-value=3.6 Score=33.17 Aligned_cols=31 Identities=10% Similarity=-0.050 Sum_probs=24.6
Q ss_pred CCCccccccCCcccCChhhhhchHHHHHHHHHHHHH
Q 021221 187 HNNTEEESCPFSWARSPENLLQQETYLALATAFVLL 222 (316)
Q Consensus 187 ~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~~ 222 (316)
.+++.| ++ +||+.|... .|.+.++...|...
T Consensus 51 ~vlv~F-~a--twC~~C~~~--~~~l~~l~~~~~~~ 81 (185)
T 2gs3_A 51 VCIVTN-VA--SQGGKTEVN--YTQLVDLHARYAEC 81 (185)
T ss_dssp EEEEEE-EC--SSSTTHHHH--HHHHHHHHHHHGGG
T ss_pred EEEEEE-ec--CCCCchHHH--HHHHHHHHHHhhcC
Confidence 356777 88 999999988 78888888877643
No 495
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=60.67 E-value=4.6 Score=31.58 Aligned_cols=78 Identities=15% Similarity=0.033 Sum_probs=40.8
Q ss_pred EEEEEcCCChHHHhhhHHHHHHHHHcCCCcEEEEEeCCC----ChhhHhhcCCCccceEEEEe-CceeEEEe----CCCC
Q 021221 85 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAI----RPSILSKYGVHGFPTLFLLN-SSMRVRYH----GSRT 155 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~~p~~~~la~~~~~~~~v~~~~~~~----~~~l~~~~~I~~~Pti~l~~-g~~~~~~~----G~~~ 155 (316)
+..|+.|+|+.|++....+++- ++.+ ...|..+ ..++.+-++-.++|.--+++ .....+-. ...+
T Consensus 4 itiY~~p~C~~crkak~~L~~~-----gi~~-~~idi~~~~~~~~eL~~~~~~~g~p~~~l~n~~~~~yk~l~l~~~~ls 77 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIRNS-----GTEP-TIILYLENPPSRDELVKLIADMGISVRALLRKNVEPYEQLGLAEDKFT 77 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHHHT-----TCCC-EEECTTTSCCCHHHHHHHHHHHTSCHHHHBCSSSHHHHHTTTTSSCCC
T ss_pred EEEEECCCChHHHHHHHHHHHc-----CCCE-EEEECCCCCccHHHHHHHhcccCCCHHHhccCCchhHHhcCCccccCC
Confidence 4568899999999998887762 3222 2223222 12333333434456544452 11111100 1346
Q ss_pred HHHHHHHHHHhhC
Q 021221 156 LDSLVAFYSDVTA 168 (316)
Q Consensus 156 ~~~l~~fi~~~~~ 168 (316)
.+++.+.+.++-.
T Consensus 78 ~~~~~~lm~~~P~ 90 (141)
T 1s3c_A 78 DDQLIDFMLQHPI 90 (141)
T ss_dssp HHHHHHHHHHSGG
T ss_pred HHHHHHHHHhCcc
Confidence 7777777776543
No 496
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=60.04 E-value=1.9 Score=34.78 Aligned_cols=30 Identities=13% Similarity=0.049 Sum_probs=23.5
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFV 220 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~ 220 (316)
+.+++.| ++ +||.+|+.. .|.+..+...|.
T Consensus 34 k~vlv~F-~a--~~C~~C~~~--~~~l~~l~~~~~ 63 (188)
T 2cvb_A 34 PLLAVVF-MC--NHCPYVKGS--IGELVALAERYR 63 (188)
T ss_dssp SEEEEEE-EC--SSCHHHHTT--HHHHHHHHHHTT
T ss_pred CEEEEEE-EC--CCCccHHHH--HHHHHHHHHHhh
Confidence 3467777 88 999999998 788888777653
No 497
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=59.76 E-value=0.71 Score=36.99 Aligned_cols=41 Identities=20% Similarity=-0.041 Sum_probs=27.5
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHHHHHHHhHHhhhhh
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATAFVLLRLVYIFLPT 231 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~f~~~~~~i~~~Pt 231 (316)
+..++.| .. +||.+|.++ .|....+...+-..++.+..+|.
T Consensus 23 ~v~i~~f-~d--~~Cp~C~~~--~~~l~~l~~~~~~v~~~~~~~p~ 63 (175)
T 3gyk_A 23 DVTVVEF-FD--YNCPYCRRA--MAEVQGLVDADPNVRLVYREWPI 63 (175)
T ss_dssp SEEEEEE-EC--TTCHHHHHH--HHHHHHHHHHCTTEEEEEEECCC
T ss_pred CEEEEEE-EC--CCCccHHHH--HHHHHHHHHhCCCEEEEEEeCCC
Confidence 3456777 88 999999999 88887776654323444444443
No 498
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=59.66 E-value=4.1 Score=30.94 Aligned_cols=21 Identities=14% Similarity=0.213 Sum_probs=17.9
Q ss_pred EEEEEcCCChHHHhhhHHHHH
Q 021221 85 AVLFYASWCPFSRNFRPSFSV 105 (316)
Q Consensus 85 lV~Fya~WC~~Ck~~~p~~~~ 105 (316)
+..|+.|+|+.|++....+++
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~ 27 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQ 27 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHHH
Confidence 567889999999999888764
No 499
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=59.56 E-value=2.3 Score=34.02 Aligned_cols=28 Identities=18% Similarity=0.087 Sum_probs=22.4
Q ss_pred cCCCccccccCCcccCChhhhhchHHHHHHHHH
Q 021221 186 KHNNTEEESCPFSWARSPENLLQQETYLALATA 218 (316)
Q Consensus 186 ~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA~~ 218 (316)
+.+++.| ++ +||.+|+.. .|.+.+++..
T Consensus 59 k~vll~F-~a--~~C~~C~~~--~~~l~~l~~~ 86 (176)
T 3kh7_A 59 KPALVNV-WG--TWCPSCRVE--HPELTRLAEQ 86 (176)
T ss_dssp SCEEEEE-EC--TTCHHHHHH--HHHHHHHHHT
T ss_pred CEEEEEE-EC--CcCHHHHHH--HHHHHHHHHC
Confidence 3456777 88 999999998 8888887764
No 500
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=57.72 E-value=1.8 Score=36.09 Aligned_cols=27 Identities=19% Similarity=-0.081 Sum_probs=21.2
Q ss_pred ccCCCccccccCCcccCChhhhhchHHHHHHH
Q 021221 185 EKHNNTEEESCPFSWARSPENLLQQETYLALA 216 (316)
Q Consensus 185 ~~~~~v~f~~~~~pw~~~~~~~l~~~~~~~lA 216 (316)
.+..++.| +. |||++|+++ .|....+.
T Consensus 86 ~k~~vv~F-~d--~~Cp~C~~~--~~~l~~~~ 112 (211)
T 1t3b_A 86 EKHVVTVF-MD--ITCHYCHLL--HQQLKEYN 112 (211)
T ss_dssp CSEEEEEE-EC--TTCHHHHHH--HTTHHHHH
T ss_pred CCEEEEEE-EC--CCCHhHHHH--HHHHHHHH
Confidence 44567888 89 999999999 77766654
Done!