Your job contains 1 sequence.
>021226
MARSAATPEILLKDHVILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGGQDEAS
AVLSFLTGRGKALYLSISKNEFTEGVKVSLSPAAVSSISSLDYDVLHLIWTVEKLQLQLD
IIDRHYEMSRKSALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAE
STKKVSEAIQIGAQAIKKNKISVEELQLCLEELEESIDLQKQAEKVIVPSYTGIDDEDIE
EEFKKLEQEVECERPKPTVSKTGVNEPAASESAESLRVAFSTIGLNDGQATALAISDTVV
PDRSNESKHPMLESA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021226
(315 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2097998 - symbol:AT3G62080 "AT3G62080" species... 563 1.6e-54 1
UNIPROTKB|G1K2Y2 - symbol:CHMP7 "Charged multivesicular b... 133 3.6e-06 1
UNIPROTKB|Q5ZJB7 - symbol:CHMP7 "Charged multivesicular b... 133 4.2e-06 1
UNIPROTKB|A6H704 - symbol:CHMP7 "Uncharacterized protein"... 129 1.2e-05 1
DICTYBASE|DDB_G0277133 - symbol:DDB_G0277133 "SNF7 family... 125 3.9e-05 1
UNIPROTKB|F1NRR9 - symbol:CHMP7 "Charged multivesicular b... 124 4.4e-05 1
UNIPROTKB|Q8WUX9 - symbol:CHMP7 "Charged multivesicular b... 124 4.6e-05 1
UNIPROTKB|Q5R812 - symbol:CHMP7 "Charged multivesicular b... 124 4.6e-05 1
RGD|1308779 - symbol:Chmp7 "charged multivesicular body p... 123 6.0e-05 1
MGI|MGI:1913922 - symbol:Chmp7 "charged multivesicular bo... 123 6.0e-05 1
ZFIN|ZDB-GENE-040426-1750 - symbol:chmp7 "CHMP family, me... 113 0.00082 1
>TAIR|locus:2097998 [details] [associations]
symbol:AT3G62080 "AT3G62080" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=RCA] InterPro:IPR005024 Pfam:PF03357 EMBL:CP002686
GO:GO:0015031 KO:K15053 UniGene:At.1005 IPI:IPI00846212
RefSeq:NP_001078328.1 ProteinModelPortal:F4IX33 PRIDE:F4IX33
EnsemblPlants:AT3G62080.2 GeneID:825381 KEGG:ath:AT3G62080
OMA:SHWTSTC Uniprot:F4IX33
Length = 462
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 132/316 (41%), Positives = 188/316 (59%)
Query: 1 MARSAATPEILLKDHVILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGGQDEAS 60
M + E +L++ ++L+ +LK+KA +V+K+LSE HWTS+C++T+KKF++ C G +EAS
Sbjct: 157 MVQQPVKQEEILENTLVLVPLLKEKAADVVKILSEGHWTSTCVVTLKKFRNLCNGSNEAS 216
Query: 61 AVLSFLTGRGKALYLSISKNEFTEGVKXXXXXXXXXXXXXXDYDVLHLIWTVEKLQLQLD 120
AVLS L+G GKA +SI++ E EGVK D D+LHL+ T EKLQ QL+
Sbjct: 217 AVLSHLSGCGKAHKISINRGELIEGVKVSFSQTALPGISTLDCDILHLLRTTEKLQDQLE 276
Query: 121 IIDRHYEMSRKSALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAE 180
++D+ E S+KSALASL SG++ VALRHA++LK+ ESREKCTSLLNRVEEVL+ I ++E
Sbjct: 277 VMDQRCEKSKKSALASLKSGHRKVALRHARELKVVTESREKCTSLLNRVEEVLNTIADSE 336
Query: 181 STKKVSEAIQIGAQAIKKNKISVXXXXXXXXXXXXSIDLQKQAEKVIVPS-YTGIXXXXX 239
STK VSEAI+ GA+ +K KIS +I+ QKQ EK + + Y I
Sbjct: 337 STKMVSEAIKTGARVMKDIKISADDVHDYLEELEETIESQKQVEKALESAPYPDIDDEDI 396
Query: 240 XXXXXXXXXXXXXXRPKPTVSKTGVNEPAASESAESLRVAFSTIGLNDGQATALAISDTV 299
S++ PA S++A+SL FS + L G+
Sbjct: 397 EEELLELEMDLE--------SESSQVLPATSDTADSLTEMFSELKL--GKTKQTLEEQAT 446
Query: 300 VPDRSNESKHPMLESA 315
P + +S +LE+A
Sbjct: 447 EPAQMKDSGKKILEAA 462
>UNIPROTKB|G1K2Y2 [details] [associations]
symbol:CHMP7 "Charged multivesicular body protein 7"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00530000063571 EMBL:AADN02055452 EMBL:AADN02055453
Ensembl:ENSGALT00000000557 Uniprot:G1K2Y2
Length = 411
Score = 133 (51.9 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 45/185 (24%), Positives = 88/185 (47%)
Query: 16 VILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGG--QDEASAVLSFLTGRGKAL 73
+I +E+L++KA+EV +L S +S ++ + + + C G DE + L L + K
Sbjct: 111 LIYVELLQEKAEEVYRLYQNSVLSSHPVVALSELRSLCAGVCPDERTFYLLLLQLQ-KEK 169
Query: 74 YLSISKNEFTEGVKXXXXXXXXXX-XXXXDYDVLHLIWTVEKLQLQLDIIDRHYEMSRKS 132
++I + + VK D V L+ + + L +++ + + E +
Sbjct: 170 KVTILEQNGEKIVKFARGLHAKVSPMNDVDIGVYQLMQSEQLLSQKVESLSQEAEKCKDD 229
Query: 133 ALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTKKVSEAIQIG 192
A ++ +G K +ALR K + T+ E+ S L+ V+ +L I +++ + V A Q G
Sbjct: 230 ARSACRAGKKQLALRCLKSKRRTERRIEELHSKLDAVQGILDRIYASQTDQMVFNAYQAG 289
Query: 193 AQAIK 197
A+K
Sbjct: 290 VGALK 294
>UNIPROTKB|Q5ZJB7 [details] [associations]
symbol:CHMP7 "Charged multivesicular body protein 7"
species:9031 "Gallus gallus" [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0008565 "protein transporter activity"
evidence=ISS] [GO:0045324 "late endosome to vacuole transport"
evidence=ISS] InterPro:IPR005024 Pfam:PF03357 GO:GO:0008565
GO:GO:0045324 GO:GO:0000815 EMBL:AJ720517 IPI:IPI00582132
RefSeq:NP_001006306.1 UniGene:Gga.19416 ProteinModelPortal:Q5ZJB7
STRING:Q5ZJB7 PRIDE:Q5ZJB7 GeneID:419535 KEGG:gga:419535 CTD:91782
eggNOG:NOG272120 HOGENOM:HOG000290682 HOVERGEN:HBG081151 KO:K15053
NextBio:20822577 Uniprot:Q5ZJB7
Length = 448
Score = 133 (51.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 45/185 (24%), Positives = 88/185 (47%)
Query: 16 VILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGG--QDEASAVLSFLTGRGKAL 73
+I +E+L++KA+EV +L S +S ++ + + + C G DE + L L + K
Sbjct: 148 LIYVELLQEKAEEVYRLYQNSVLSSHPVVALSELRSLCAGVCPDERTFYLLLLQLQ-KEK 206
Query: 74 YLSISKNEFTEGVKXXXXXXXXXX-XXXXDYDVLHLIWTVEKLQLQLDIIDRHYEMSRKS 132
++I + + VK D V L+ + + L +++ + + E +
Sbjct: 207 KVTILEQNGEKIVKFARGLHAKVSPMNDVDIGVYQLMQSEQLLSQKVESLSQEAEKCKDD 266
Query: 133 ALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTKKVSEAIQIG 192
A ++ +G K +ALR K + T+ E+ S L+ V+ +L I +++ + V A Q G
Sbjct: 267 ARSACRAGKKQLALRCLKSKRRTERRIEELHSKLDAVQGILDRIYASQTDQMVFNAYQAG 326
Query: 193 AQAIK 197
A+K
Sbjct: 327 VGALK 331
>UNIPROTKB|A6H704 [details] [associations]
symbol:CHMP7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045324 "late endosome to vacuole transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000815
"ESCRT III complex" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005634 GO:GO:0008565 GO:GO:0045324 GO:GO:0000815
GeneTree:ENSGT00530000063571 CTD:91782 eggNOG:NOG272120
HOGENOM:HOG000290682 HOVERGEN:HBG081151 KO:K15053 OrthoDB:EOG4HHP33
OMA:WDDDERM EMBL:DAAA02023574 EMBL:DAAA02023571 EMBL:DAAA02023572
EMBL:DAAA02023573 EMBL:BC146064 IPI:IPI00691723
RefSeq:NP_001092589.1 UniGene:Bt.4082 STRING:A6H704
Ensembl:ENSBTAT00000017987 GeneID:541288 KEGG:bta:541288
InParanoid:A6H704 NextBio:20879119 Uniprot:A6H704
Length = 450
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 43/185 (23%), Positives = 87/185 (47%)
Query: 16 VILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGGQ--DEASAVLSFLTGRGKAL 73
++ +E+LK+KA+EV +L S +S ++ + + C G DE + L L + K
Sbjct: 150 LVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSTLCAGSCPDERTFYLVLLQLQ-KEK 208
Query: 74 YLSISKNEFTEGVKXXXXXXXXXX-XXXXDYDVLHLIWTVEKLQLQLDIIDRHYEMSRKS 132
+++ + + VK D V L+ + + L +++ + + E ++
Sbjct: 209 RVTVLEQNGEKIVKFARGPHAKVSPVNDVDVGVYQLMQSEQLLSRKVESLSQEAERYKEE 268
Query: 133 ALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTKKVSEAIQIG 192
A + +G K +ALR K + T++ E + L+ V+ +L I +++ + V A Q G
Sbjct: 269 ARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQMVFNAYQAG 328
Query: 193 AQAIK 197
A+K
Sbjct: 329 VGALK 333
>DICTYBASE|DDB_G0277133 [details] [associations]
symbol:DDB_G0277133 "SNF7 family protein"
species:44689 "Dictyostelium discoideum" [GO:0015031 "protein
transport" evidence=IEA] [GO:0045324 "late endosome to vacuole
transport" evidence=ISS] [GO:0008565 "protein transporter activity"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0006810 "transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0277133 GO:GO:0008565 GenomeReviews:CM000151_GR
EMBL:AAFI02000019 GO:GO:0045324 GO:GO:0000815 eggNOG:NOG272120
KO:K15053 RefSeq:XP_642803.1 ProteinModelPortal:Q86K93 PRIDE:Q86K93
EnsemblProtists:DDB0266400 GeneID:8620866 KEGG:ddi:DDB_G0277133
OMA:MAKTYLR ProtClustDB:CLSZ2729144 Uniprot:Q86K93
Length = 477
Score = 125 (49.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 59/247 (23%), Positives = 105/247 (42%)
Query: 6 ATPEILLKDHV--ILMEVLKDKADEVIK-LLSESHWTSSCIITM----KKFQDKCGGQDE 58
+TP + +V IL E++KDKA+++ + L + T+ II+ K +D ++E
Sbjct: 135 STPNTETEKNVKFILPEMIKDKAEQLYQHQLKNMNSTTDNIISYINLEKSIKDWYITREE 194
Query: 59 ASAVLSFLTGRGKALYLS------ISKNEFTE---GVKXXXXXXXXXXXXXXDYDVLHLI 109
+L L K L L+ I+ N E G+K D+ +L L
Sbjct: 195 LDLLLLVLFRDSKVLILTNNKIKNINNNNNGEDRIGIKFAFDGEKVQPIQETDFGILKLQ 254
Query: 110 WTVEKLQLQLDIIDRHYEMSRKSALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRV 169
T E L+ Q + E + S+ K AL K+ KL + EK + +
Sbjct: 255 TTYETLKQQESKLLTDIEEISNTIKESIRIKQKNHALLQLKKKKLLESILEKRATASTNI 314
Query: 170 EEVLSLIENAESTKKVSEAIQIGAQAIKK--NKISVXXXXXXXXXXXXSIDLQKQAEKVI 227
E+L IE+A+S +++ E++ G +KK +ISV +I Q++ + +
Sbjct: 315 HEILFSIESAKSNQQIIESLCTGVSTLKKVNQEISVDQVDSILDDYQDAITNQREIDDAM 374
Query: 228 VPSYTGI 234
+ +
Sbjct: 375 KSGFNSV 381
>UNIPROTKB|F1NRR9 [details] [associations]
symbol:CHMP7 "Charged multivesicular body protein 7"
species:9031 "Gallus gallus" [GO:0000815 "ESCRT III complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0045324 "late
endosome to vacuole transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0005634 GO:GO:0008565 GO:GO:0045324
GO:GO:0000815 GeneTree:ENSGT00530000063571 OMA:WDDDERM
EMBL:AADN02055452 EMBL:AADN02055453 IPI:IPI00823092
Ensembl:ENSGALT00000040959 Uniprot:F1NRR9
Length = 438
Score = 124 (48.7 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 45/186 (24%), Positives = 88/186 (47%)
Query: 16 VILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGG--QDEASAVLSFLTGRGKAL 73
+I +E+L++KA+EV +L S +S ++ + + + C G DE + L L + K
Sbjct: 137 LIYVELLQEKAEEVYRLYQNSVLSSHPVVALSELRSLCAGVCPDERTFYLLLLQLQ-KEK 195
Query: 74 YLSISKNEFTEGVKXXXXXXXXXX-XXXXDYDVLHLIWTVEKLQLQLDIIDRHYEMSRKS 132
++I + + VK D V L+ + + L +++ + + E +
Sbjct: 196 KVTILEQNGEKIVKFARGLHAKVSPMNDVDIGVYQLMQSEQLLSQKVESLSQEAEKCKDD 255
Query: 133 ALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTKKVS-EAIQI 191
A ++ +G K +ALR K + T+ E+ S L+ V+ +L I +++ + V A Q
Sbjct: 256 ARSACRAGKKQLALRCLKSKRRTERRIEELHSKLDAVQGILDRIYASQTDQMVVFNAYQA 315
Query: 192 GAQAIK 197
G A+K
Sbjct: 316 GVGALK 321
>UNIPROTKB|Q8WUX9 [details] [associations]
symbol:CHMP7 "Charged multivesicular body protein 7"
species:9606 "Homo sapiens" [GO:0000815 "ESCRT III complex"
evidence=IDA] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP] [GO:0008565 "protein transporter activity"
evidence=IMP] [GO:0005829 "cytosol" evidence=TAS] [GO:0016044
"cellular membrane organization" evidence=TAS] [GO:0016197
"endosomal transport" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
GO:GO:0005634 EMBL:CH471080 GO:GO:0008565 GO:GO:0016044
GO:GO:0045324 GO:GO:0000815 CTD:91782 eggNOG:NOG272120
HOGENOM:HOG000290682 HOVERGEN:HBG081151 KO:K15053 OrthoDB:EOG4HHP33
EMBL:AK315664 EMBL:AL833843 EMBL:BC004344 EMBL:BC019110
EMBL:BC042050 IPI:IPI00395463 RefSeq:NP_689485.1 UniGene:Hs.5019
ProteinModelPortal:Q8WUX9 SMR:Q8WUX9 IntAct:Q8WUX9
MINT:MINT-1460844 STRING:Q8WUX9 PhosphoSite:Q8WUX9 DMDM:73917782
PaxDb:Q8WUX9 PRIDE:Q8WUX9 Ensembl:ENST00000313219
Ensembl:ENST00000397677 GeneID:91782 KEGG:hsa:91782 UCSC:uc003xdc.2
GeneCards:GC08P023101 HGNC:HGNC:28439 HPA:HPA036119 MIM:611130
neXtProt:NX_Q8WUX9 PharmGKB:PA142672115 InParanoid:Q8WUX9
OMA:WDDDERM GenomeRNAi:91782 NextBio:77457 ArrayExpress:Q8WUX9
Bgee:Q8WUX9 CleanEx:HS_CHMP7 Genevestigator:Q8WUX9
GermOnline:ENSG00000147457 Uniprot:Q8WUX9
Length = 453
Score = 124 (48.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 42/185 (22%), Positives = 86/185 (46%)
Query: 16 VILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGGQ--DEASAVLSFLTGRGKAL 73
++ +E+LK+KA+EV +L S +S ++ + + C DE + L L + K
Sbjct: 150 LVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSTLCANSCPDERTFYLVLLQLQ-KEK 208
Query: 74 YLSISKNEFTEGVKXXXXXXXXXX-XXXXDYDVLHLIWTVEKLQLQLDIIDRHYEMSRKS 132
+++ + + VK D V L+ + + L +++ + + E ++
Sbjct: 209 RVTVLEQNGEKIVKFARGPRAKVSPVNDVDVGVYQLMQSEQLLSRKVESLSQEAERCKEE 268
Query: 133 ALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTKKVSEAIQIG 192
A + +G K +ALR K + T++ E + L+ V+ +L I +++ + V A Q G
Sbjct: 269 ARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQMVFNAYQAG 328
Query: 193 AQAIK 197
A+K
Sbjct: 329 VGALK 333
>UNIPROTKB|Q5R812 [details] [associations]
symbol:CHMP7 "Charged multivesicular body protein 7"
species:9601 "Pongo abelii" [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0008565 "protein transporter activity"
evidence=ISS] [GO:0045324 "late endosome to vacuole transport"
evidence=ISS] InterPro:IPR005024 Pfam:PF03357 GO:GO:0008565
GO:GO:0045324 GO:GO:0000815 CTD:91782 HOVERGEN:HBG081151 KO:K15053
EMBL:CR859943 RefSeq:NP_001126224.1 UniGene:Pab.18869
ProteinModelPortal:Q5R812 GeneID:100173193 KEGG:pon:100173193
InParanoid:Q5R812 Uniprot:Q5R812
Length = 453
Score = 124 (48.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 42/185 (22%), Positives = 86/185 (46%)
Query: 16 VILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGGQ--DEASAVLSFLTGRGKAL 73
++ +E+LK+KA+EV +L S +S ++ + + C DE + L L + K
Sbjct: 150 LVAVELLKEKAEEVYRLYQSSPLSSHPVVALSELSTLCANSCPDERTFYLVLLQLQ-KEK 208
Query: 74 YLSISKNEFTEGVKXXXXXXXXXX-XXXXDYDVLHLIWTVEKLQLQLDIIDRHYEMSRKS 132
+++ + + VK D V L+ + + L +++ + + E ++
Sbjct: 209 RVTVLEQNGEKIVKFARGPHAKVSPVNDVDVGVYQLMQSEQLLSRKVESLSQEAERCKEE 268
Query: 133 ALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTKKVSEAIQIG 192
A + +G K +ALR K + T++ E + L+ V+ +L I +++ + V A Q G
Sbjct: 269 ARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQMVFNAYQAG 328
Query: 193 AQAIK 197
A+K
Sbjct: 329 VGALK 333
>RGD|1308779 [details] [associations]
symbol:Chmp7 "charged multivesicular body protein 7"
species:10116 "Rattus norvegicus" [GO:0000815 "ESCRT III complex"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0008565 "protein
transporter activity" evidence=IEA;ISO] [GO:0045324 "late endosome
to vacuole transport" evidence=IEA;ISO] InterPro:IPR005024
Pfam:PF03357 RGD:1308779 GO:GO:0005634 GO:GO:0008565 GO:GO:0045324
GO:GO:0000815 GeneTree:ENSGT00530000063571 CTD:91782 KO:K15053
OrthoDB:EOG4HHP33 OMA:WDDDERM EMBL:CH473951 IPI:IPI00214613
RefSeq:NP_001102342.1 UniGene:Rn.136789 Ensembl:ENSRNOT00000023318
GeneID:364419 KEGG:rno:364419 UCSC:RGD:1308779 NextBio:685378
Uniprot:D4A7H9
Length = 450
Score = 123 (48.4 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 42/185 (22%), Positives = 86/185 (46%)
Query: 16 VILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGGQ--DEASAVLSFLTGRGKAL 73
++ +E+LK+KA+EV +L S +S ++ + + C DE + L L + K
Sbjct: 150 LVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSALCANSCPDERTFYLVLLQLQ-KEK 208
Query: 74 YLSISKNEFTEGVKXXXXXXXXXX-XXXXDYDVLHLIWTVEKLQLQLDIIDRHYEMSRKS 132
+++ + + VK D V L+ + + L +++ + + E ++
Sbjct: 209 RVTVLEQNGEKIVKFARGPHAKVSPVNDVDVGVYQLMQSEQLLSQKVESLSQESERCKEE 268
Query: 133 ALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTKKVSEAIQIG 192
A + +G K +ALR K + T++ E + L+ V+ +L I +++ + V A Q G
Sbjct: 269 ARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQMVFNAYQAG 328
Query: 193 AQAIK 197
A+K
Sbjct: 329 VGALK 333
>MGI|MGI:1913922 [details] [associations]
symbol:Chmp7 "charged multivesicular body protein 7"
species:10090 "Mus musculus" [GO:0000815 "ESCRT III complex"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0045324 "late endosome to vacuole transport"
evidence=ISO] InterPro:IPR005024 Pfam:PF03357 MGI:MGI:1913922
GO:GO:0005634 GO:GO:0008565 GO:GO:0045324 GO:GO:0000815
GeneTree:ENSGT00530000063571 CTD:91782 eggNOG:NOG272120
HOGENOM:HOG000290682 HOVERGEN:HBG081151 KO:K15053 OrthoDB:EOG4HHP33
OMA:WDDDERM EMBL:BC024115 EMBL:BC033365 IPI:IPI00153445
IPI:IPI00461712 RefSeq:NP_598839.2 UniGene:Mm.159637
ProteinModelPortal:Q8R1T1 SMR:Q8R1T1 STRING:Q8R1T1
PhosphoSite:Q8R1T1 PaxDb:Q8R1T1 PRIDE:Q8R1T1
Ensembl:ENSMUST00000036381 GeneID:105513 KEGG:mmu:105513
UCSC:uc007ums.2 InParanoid:Q8R1T1 ChiTaRS:CHMP7 NextBio:357748
Bgee:Q8R1T1 CleanEx:MM_CHMP7 Genevestigator:Q8R1T1
GermOnline:ENSMUSG00000034190 Uniprot:Q8R1T1
Length = 451
Score = 123 (48.4 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 42/185 (22%), Positives = 86/185 (46%)
Query: 16 VILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGGQ--DEASAVLSFLTGRGKAL 73
++ +E+LK+KA+EV +L S +S ++ + + C DE + L L + K
Sbjct: 150 LVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSALCANSCPDERTFYLVLLQLQ-KEK 208
Query: 74 YLSISKNEFTEGVKXXXXXXXXXX-XXXXDYDVLHLIWTVEKLQLQLDIIDRHYEMSRKS 132
+++ + + VK D V L+ + + L +++ + + E ++
Sbjct: 209 RVTVLEQNGEKIVKFARGPHAKVSPVNDVDVGVYQLMQSEQLLSRKVESLSQESERCKEE 268
Query: 133 ALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTKKVSEAIQIG 192
A + +G K +ALR K + T++ E + L+ V+ +L I +++ + V A Q G
Sbjct: 269 ARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQMVFNAYQAG 328
Query: 193 AQAIK 197
A+K
Sbjct: 329 VGALK 333
>ZFIN|ZDB-GENE-040426-1750 [details] [associations]
symbol:chmp7 "CHMP family, member 7" species:7955
"Danio rerio" [GO:0015031 "protein transport" evidence=IEA]
[GO:0000815 "ESCRT III complex" evidence=ISS] [GO:0045324 "late
endosome to vacuole transport" evidence=ISS] [GO:0008565 "protein
transporter activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 ZFIN:ZDB-GENE-040426-1750
GO:GO:0008565 GO:GO:0045324 GO:GO:0000815 CTD:91782
eggNOG:NOG272120 HOGENOM:HOG000290682 HOVERGEN:HBG081151 KO:K15053
EMBL:BC059625 EMBL:BC066676 IPI:IPI00506588 RefSeq:NP_957075.1
UniGene:Dr.84727 ProteinModelPortal:Q6PBQ2 STRING:Q6PBQ2
PRIDE:Q6PBQ2 GeneID:393754 KEGG:dre:393754 InParanoid:Q6PBQ2
OrthoDB:EOG4HHP33 NextBio:20814753 Uniprot:Q6PBQ2
Length = 457
Score = 113 (44.8 bits), Expect = 0.00082, P = 0.00082
Identities = 36/189 (19%), Positives = 93/189 (49%)
Query: 12 LKDHVILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGG--QDEASAVLSFLTGR 69
L++ +++E++K+KA E++ S ++ +++ ++ + DE++ ++ L +
Sbjct: 137 LEESFVVIELVKEKAAELLAAYRGSALSARSLLSFQELRSLSSHICPDESTLCMALLQLQ 196
Query: 70 GKALYLSISKNEFTEGVKXXXXXXXXXX-XXXXDYDVLHLIWTVEKLQLQLDIIDRHYEM 128
+ ++++S +E + VK D + L + + L+ +++ + E
Sbjct: 197 -REKHVTVSLHEGEKLVKFSQAGQGRVSPVSEVDLGIYQLQCSEKLLEERVEALGHEAEK 255
Query: 129 SRKSALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTKKVSEA 188
++ A + L G K+ ALR + K ++ ++ + L V+ +L I N+++ + V +A
Sbjct: 256 CKQQAKSLLKEGKKSQALRCLRGSKRVEKKADRLFAQLETVKGILDRIANSQTDRLVMQA 315
Query: 189 IQIGAQAIK 197
Q G A++
Sbjct: 316 YQAGVAALR 324
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.126 0.337 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 315 270 0.00097 114 3 10 23 0.40 34
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 617 (66 KB)
Total size of DFA: 249 KB (2136 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.45u 0.14s 30.59t Elapsed: 00:00:01
Total cpu time: 30.45u 0.14s 30.59t Elapsed: 00:00:01
Start: Sat May 11 07:53:00 2013 End: Sat May 11 07:53:01 2013