Query 021232
Match_columns 315
No_of_seqs 196 out of 1207
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 08:38:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021232.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021232hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 2.9E-64 6.3E-69 472.3 26.2 278 8-303 13-298 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 9.6E-62 2.1E-66 451.0 23.3 264 24-304 1-268 (315)
3 PRK15381 pathogenicity island 100.0 1.2E-50 2.6E-55 382.8 20.0 218 21-303 140-357 (408)
4 cd01847 Triacylglycerol_lipase 100.0 9.3E-50 2E-54 364.9 17.2 233 23-304 1-237 (281)
5 cd01846 fatty_acyltransferase_ 100.0 1.3E-44 2.9E-49 328.6 19.6 231 25-304 1-231 (270)
6 COG3240 Phospholipase/lecithin 100.0 5E-29 1.1E-33 227.6 13.0 253 19-303 25-287 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.8 5.3E-20 1.1E-24 161.8 11.0 209 26-297 1-219 (234)
8 cd01839 SGNH_arylesterase_like 98.6 5.7E-07 1.2E-11 78.3 11.5 155 66-283 20-180 (208)
9 cd01832 SGNH_hydrolase_like_1 98.6 1.1E-06 2.3E-11 74.8 12.1 155 25-283 1-156 (185)
10 cd01836 FeeA_FeeB_like SGNH_hy 98.4 3.1E-06 6.7E-11 72.5 11.6 93 160-283 69-162 (191)
11 cd01823 SEST_like SEST_like. A 98.3 1.4E-05 3E-10 71.9 13.7 169 70-284 31-217 (259)
12 cd04501 SGNH_hydrolase_like_4 98.2 4.6E-05 1E-09 64.7 14.2 92 160-286 61-152 (183)
13 cd01844 SGNH_hydrolase_like_6 98.2 7.2E-05 1.6E-09 63.4 14.1 89 160-282 59-148 (177)
14 cd01830 XynE_like SGNH_hydrola 98.1 0.0001 2.3E-09 63.9 13.4 56 160-220 76-131 (204)
15 cd01838 Isoamyl_acetate_hydrol 98.0 8E-05 1.7E-09 63.6 12.0 103 158-284 63-168 (199)
16 cd01821 Rhamnogalacturan_acety 98.0 0.00011 2.5E-09 63.2 12.8 96 159-287 66-161 (198)
17 cd01827 sialate_O-acetylestera 98.0 0.00018 3.9E-09 61.2 13.4 89 160-282 69-158 (188)
18 cd04506 SGNH_hydrolase_YpmR_li 98.0 9.1E-05 2E-09 64.0 10.9 102 159-284 69-175 (204)
19 cd01822 Lysophospholipase_L1_l 97.9 0.00033 7.2E-09 58.8 12.6 44 160-216 66-109 (177)
20 cd01834 SGNH_hydrolase_like_2 97.9 0.00019 4.2E-09 60.8 11.1 100 160-288 63-163 (191)
21 PF13472 Lipase_GDSL_2: GDSL-l 97.8 0.0001 2.2E-09 61.1 8.5 93 160-284 63-155 (179)
22 cd01825 SGNH_hydrolase_peri1 S 97.8 0.00043 9.3E-09 58.7 11.8 91 160-284 58-149 (189)
23 PRK10528 multifunctional acyl- 97.7 0.00055 1.2E-08 58.9 12.0 42 160-213 73-114 (191)
24 cd01824 Phospholipase_B_like P 97.7 0.0026 5.7E-08 58.4 17.0 227 20-287 7-248 (288)
25 cd01835 SGNH_hydrolase_like_3 97.6 0.0023 5E-08 54.7 13.5 91 160-284 71-161 (193)
26 PF14606 Lipase_GDSL_3: GDSL-l 97.1 0.0024 5.1E-08 54.3 8.3 160 24-296 2-168 (178)
27 cd01831 Endoglucanase_E_like E 96.8 0.027 5.8E-07 47.1 11.9 46 160-215 57-103 (169)
28 cd01833 XynB_like SGNH_hydrola 96.7 0.014 3E-07 48.0 9.2 89 160-284 42-131 (157)
29 cd01841 NnaC_like NnaC (CMP-Ne 96.4 0.021 4.7E-07 47.7 8.9 89 160-284 53-142 (174)
30 cd01828 sialate_O-acetylestera 96.4 0.036 7.9E-07 46.1 10.1 84 160-283 50-135 (169)
31 KOG3035 Isoamyl acetate-hydrol 96.3 0.11 2.4E-06 45.2 12.1 112 159-292 69-185 (245)
32 cd04502 SGNH_hydrolase_like_7 96.2 0.12 2.5E-06 43.1 12.4 87 160-285 52-139 (171)
33 cd00229 SGNH_hydrolase SGNH_hy 96.1 0.056 1.2E-06 44.0 9.7 95 158-285 65-160 (187)
34 cd01829 SGNH_hydrolase_peri2 S 95.8 0.076 1.6E-06 45.4 9.5 94 160-284 61-155 (200)
35 cd01820 PAF_acetylesterase_lik 95.5 0.14 3E-06 44.6 10.2 86 160-283 91-177 (214)
36 KOG3670 Phospholipase [Lipid t 95.0 0.27 5.8E-06 46.5 10.6 75 130-214 160-236 (397)
37 COG2755 TesA Lysophospholipase 94.5 0.47 1E-05 41.0 10.6 14 159-173 78-91 (216)
38 cd01826 acyloxyacyl_hydrolase_ 93.0 1 2.3E-05 41.5 10.2 55 160-219 124-180 (305)
39 cd01840 SGNH_hydrolase_yrhL_li 90.0 1.4 3E-05 36.0 7.1 27 251-283 95-121 (150)
40 PF08194 DIM: DIM protein; In 84.5 1.6 3.4E-05 26.8 3.1 31 1-31 1-31 (36)
41 cd04824 eu_ALAD_PBGS_cysteine_ 81.9 4.8 0.0001 37.2 6.7 65 192-278 49-114 (320)
42 COG3240 Phospholipase/lecithin 80.6 2.3 5E-05 40.1 4.3 112 157-275 97-212 (370)
43 PF02633 Creatininase: Creatin 79.5 13 0.00029 32.8 8.8 85 163-286 61-145 (237)
44 PLN02757 sirohydrochlorine fer 76.1 8.3 0.00018 32.0 5.9 63 196-287 60-125 (154)
45 cd00384 ALAD_PBGS Porphobilino 75.6 11 0.00023 34.9 6.9 63 192-278 49-111 (314)
46 PRK13384 delta-aminolevulinic 74.5 11 0.00024 34.8 6.7 63 192-278 59-121 (322)
47 cd04823 ALAD_PBGS_aspartate_ri 72.8 12 0.00027 34.6 6.6 64 192-278 52-116 (320)
48 PRK09283 delta-aminolevulinic 72.7 13 0.00028 34.6 6.7 63 192-278 57-119 (323)
49 PF00490 ALAD: Delta-aminolevu 70.8 14 0.0003 34.4 6.5 64 193-278 56-119 (324)
50 cd03416 CbiX_SirB_N Sirohydroc 65.3 13 0.00029 27.9 4.6 53 196-277 46-98 (101)
51 PF01903 CbiX: CbiX; InterPro 55.9 6.7 0.00015 29.7 1.4 52 198-278 41-92 (105)
52 COG0113 HemB Delta-aminolevuli 53.3 51 0.0011 30.5 6.7 66 191-278 58-123 (330)
53 cd03414 CbiX_SirB_C Sirohydroc 50.1 54 0.0012 25.2 5.8 51 196-277 47-97 (117)
54 KOG2794 Delta-aminolevulinic a 46.6 33 0.00071 31.1 4.4 93 158-278 39-131 (340)
55 COG2845 Uncharacterized protei 45.7 1.1E+02 0.0025 28.5 7.8 81 160-266 179-262 (354)
56 PF13956 Ibs_toxin: Toxin Ibs, 43.4 15 0.00032 18.9 1.0 15 1-15 2-16 (19)
57 COG0646 MetH Methionine syntha 43.2 1.2E+02 0.0026 28.1 7.5 113 102-224 60-173 (311)
58 COG3581 Uncharacterized protei 43.1 39 0.00086 32.3 4.5 47 202-279 327-373 (420)
59 PF08029 HisG_C: HisG, C-termi 42.4 19 0.0004 26.0 1.8 21 196-216 52-72 (75)
60 TIGR03455 HisG_C-term ATP phos 41.1 33 0.00072 26.2 3.2 23 194-216 74-96 (100)
61 PF06908 DUF1273: Protein of u 39.1 1E+02 0.0022 26.1 6.2 27 189-215 24-50 (177)
62 PF08885 GSCFA: GSCFA family; 37.9 95 0.0021 27.9 6.1 86 189-292 147-232 (251)
63 KOG4079 Putative mitochondrial 35.2 17 0.00036 29.4 0.7 16 205-220 42-57 (169)
64 TIGR01091 upp uracil phosphori 34.4 1.1E+02 0.0024 26.5 5.8 51 194-282 136-186 (207)
65 PRK13660 hypothetical protein; 33.5 2.7E+02 0.0059 23.7 7.8 27 189-215 24-50 (182)
66 PF08331 DUF1730: Domain of un 33.5 1.1E+02 0.0023 22.0 4.7 66 206-278 9-78 (78)
67 PRK13717 conjugal transfer pro 31.9 77 0.0017 25.3 3.9 26 243-268 70-95 (128)
68 KOG0907 Thioredoxin [Posttrans 30.6 70 0.0015 24.6 3.5 31 256-287 38-68 (106)
69 PRK09121 5-methyltetrahydropte 28.9 1.4E+02 0.003 28.1 5.9 30 185-214 147-176 (339)
70 PRK00129 upp uracil phosphorib 28.6 1.6E+02 0.0034 25.5 5.8 49 194-280 138-186 (209)
71 PRK15305 putative fimbrial pro 28.4 54 0.0012 31.0 2.9 40 1-40 1-42 (353)
72 COG1209 RfbA dTDP-glucose pyro 25.5 2.2E+02 0.0047 26.1 6.1 35 256-298 114-148 (286)
73 cd03411 Ferrochelatase_N Ferro 25.4 74 0.0016 26.2 3.0 24 196-219 101-124 (159)
74 cd03412 CbiK_N Anaerobic cobal 24.6 66 0.0014 25.5 2.5 52 194-277 56-107 (127)
75 TIGR02089 TTC tartrate dehydro 24.5 92 0.002 29.5 3.8 36 258-293 201-236 (352)
76 TIGR02744 TrbI_Ftype type-F co 23.3 1.4E+02 0.003 23.4 3.9 27 243-269 57-83 (112)
77 TIGR00175 mito_nad_idh isocitr 22.8 1.1E+02 0.0025 28.7 4.1 37 257-293 182-218 (333)
78 cd03413 CbiK_C Anaerobic cobal 22.1 94 0.002 23.7 2.8 19 196-214 44-62 (103)
79 PF08282 Hydrolase_3: haloacid 22.1 42 0.0009 28.8 0.9 18 22-39 201-218 (254)
80 PRK06520 5-methyltetrahydropte 21.9 1.2E+02 0.0027 28.8 4.1 30 185-214 161-190 (368)
81 PRK00772 3-isopropylmalate deh 21.7 1.1E+02 0.0025 29.0 3.8 39 255-293 199-237 (358)
82 COG2908 Uncharacterized protei 21.5 2.7E+02 0.0059 24.8 5.9 66 133-218 13-78 (237)
83 cd03409 Chelatase_Class_II Cla 21.5 1.2E+02 0.0026 22.3 3.3 23 196-218 47-69 (101)
84 cd04236 AAK_NAGS-Urea AAK_NAGS 21.3 3.8E+02 0.0083 24.3 7.0 63 133-218 16-78 (271)
85 PRK08194 tartrate dehydrogenas 21.2 1.1E+02 0.0024 29.0 3.7 36 258-293 198-233 (352)
86 PRK06233 hypothetical protein; 20.9 1.3E+02 0.0029 28.6 4.2 31 185-215 162-192 (372)
87 PLN00123 isocitrate dehydrogen 20.8 1.5E+02 0.0032 28.2 4.4 36 258-293 206-241 (360)
88 PRK03437 3-isopropylmalate deh 20.6 1.2E+02 0.0026 28.7 3.7 36 258-293 198-233 (344)
89 cd03415 CbiX_CbiC Archaeal sir 20.4 1.1E+02 0.0023 24.4 2.9 19 196-214 46-64 (125)
90 PRK07807 inosine 5-monophospha 20.3 1.6E+02 0.0035 29.2 4.7 60 194-287 226-287 (479)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=2.9e-64 Score=472.29 Aligned_cols=278 Identities=25% Similarity=0.405 Sum_probs=228.4
Q ss_pred HHHHHHHhhcCCCCcccEEEEcCCcccccCCCCCcCCCcCCCCCCCCCCCCCCC-CCccccCCCchhHHHhHhhcCC-CC
Q 021232 8 FALCLLRSVSTSHLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFR-HATGRCSDGRLVIDFMAEAFRL-PY 85 (315)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~p~~~~~PyG~~~~~-~~~GRfSnG~~~~d~la~~lgl-~~ 85 (315)
++.|+...++... ++++|||||||++|+||++++.+. ..++.||||++|++ +|+||||||++|+||||+.||+ |.
T Consensus 13 ~~~~~~~~~~~~~-~~~aifvFGDSl~D~GN~~~l~~~--~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~ 89 (351)
T PLN03156 13 LAQLLVLVAETCA-KVPAIIVFGDSSVDAGNNNQISTV--AKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPA 89 (351)
T ss_pred HHHHHHHHhcccC-CCCEEEEecCcCccCCCccccccc--cccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCC
Confidence 3334444443433 799999999999999999876542 12478999999986 6999999999999999999999 78
Q ss_pred CCcccccc-cCCCCCCCcceeeeeccccccccccccccccccccCCCHHHHHHHHHHHHHHhhc--chhhhHhhhccCeE
Q 021232 86 LPPYLALK-EGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICS--TRKDCETYFKKSLF 162 (315)
Q Consensus 86 ~p~yl~~~-~~~~~~~G~NfA~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~--g~~~~~~~~~~sL~ 162 (315)
+|||+++. .+.++.+|+|||+||+++.+.+.. ....+++..||++|+++++++.. +...+++..+++||
T Consensus 90 ~ppyl~~~~~~~~~~~GvNFA~agag~~~~~~~--------~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL~ 161 (351)
T PLN03156 90 IPAYLDPSYNISDFATGVCFASAGTGYDNATSD--------VLSVIPLWKELEYYKEYQTKLRAYLGEEKANEIISEALY 161 (351)
T ss_pred CCCCcCcccCchhhcccceeecCCccccCCCcc--------ccCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCeE
Confidence 89999764 346789999999999998765320 11246799999999988776553 33344566799999
Q ss_pred EEeeecccccccccc--cC-cchhhhhhhHHHHHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCC
Q 021232 163 FVGEIGGNDYNYRAF--VG-ESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDR 239 (315)
Q Consensus 163 ~i~~iG~ND~~~~~~--~~-~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~ 239 (315)
+| |||+|||...+. .. ....++.++++.+++.+.+.|++||++|||||+|+|+||+||+|..+.... .+.
T Consensus 162 ~i-~iG~NDy~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~------~~~ 234 (351)
T PLN03156 162 LI-SIGTNDFLENYYTFPGRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNL------MGG 234 (351)
T ss_pred EE-EecchhHHHHhhccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcC------CCC
Confidence 99 999999985332 11 112246678999999999999999999999999999999999998765311 124
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHHHHhCcCCCCCccCCcCchh
Q 021232 240 NGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGQLIATLNSTS 303 (315)
Q Consensus 240 ~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~i~~nP~~yGf~~~t~~~~~ 303 (315)
.+|.+.+|++++.||++|++++++|++++||++|+++|+|++++++++||++|||++++.+||+
T Consensus 235 ~~C~~~~n~~~~~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg 298 (351)
T PLN03156 235 SECVEEYNDVALEFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCA 298 (351)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccC
Confidence 6899999999999999999999999999999999999999999999999999999999999996
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=9.6e-62 Score=450.96 Aligned_cols=264 Identities=41% Similarity=0.622 Sum_probs=223.9
Q ss_pred cEEEEcCCcccccCCCCCcCCCcCCCCCCCCCCCCCCCCCccccCCCchhHHHhHhhcCCCC-CCcccccccCCCCCCCc
Q 021232 24 HAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPY-LPPYLALKEGQNFKHGV 102 (315)
Q Consensus 24 ~~l~vFGDSlsD~Gn~~~~~~~~~p~~~~~PyG~~~~~~~~GRfSnG~~~~d~la~~lgl~~-~p~yl~~~~~~~~~~G~ 102 (315)
++|||||||++|+||+.++.+.. + ++.||||++|+++|+||||||++|+||||+.+|++. +|||+....+.++.+|+
T Consensus 1 ~al~vFGDS~sD~Gn~~~~~~~~-~-~~~~PyG~~~~~~p~GRfSnG~~~~d~la~~lgl~~~~p~~~~~~~~~~~~~G~ 78 (315)
T cd01837 1 PALFVFGDSLVDTGNNNYLPTLA-K-ANFPPYGIDFPGRPTGRFSNGRLIIDFIAEALGLPLLPPPYLSPNGSSDFLTGV 78 (315)
T ss_pred CcEEEecCccccCCCcccccccc-c-cCCCCCcCcCCCCCCccccCCchhhhhhhhhccCCCCCCCccCccccchhhccc
Confidence 47999999999999998765421 1 478999999998999999999999999999999997 67777643335678899
Q ss_pred ceeeeeccccccccccccccccccccCCCHHHHHHHHHHHHHHhhc--chhhhHhhhccCeEEEeeecccccccccccCc
Q 021232 103 NFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICS--TRKDCETYFKKSLFFVGEIGGNDYNYRAFVGE 180 (315)
Q Consensus 103 NfA~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~--g~~~~~~~~~~sL~~i~~iG~ND~~~~~~~~~ 180 (315)
|||+|||++.+.+.. ...+++|..||++|++.++++.. |...+.+..+++||+| |||+|||+..+..+.
T Consensus 79 NfA~gGA~~~~~~~~--------~~~~~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~sL~~i-~iG~ND~~~~~~~~~ 149 (315)
T cd01837 79 NFASGGAGILDSTGF--------LGSVISLSVQLEYFKEYKERLRALVGEEAAADILSKSLFLI-SIGSNDYLNNYFANP 149 (315)
T ss_pred eecccCCccccCCcc--------eeeeecHHHHHHHHHHHHHHHHHhhCHHHHHHHHhCCEEEE-EecccccHHHHhcCc
Confidence 999999999876421 12357999999999988766543 4444557789999999 999999987553322
Q ss_pred c-hhhhhhhHHHHHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHH
Q 021232 181 S-INQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKA 259 (315)
Q Consensus 181 ~-~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~ 259 (315)
. ..+..++++.+++++.++|++||++|||||+|+|+||+||+|.++.... .+..+|.+.+|++++.||++|++
T Consensus 150 ~~~~~~~~~~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~~------~~~~~c~~~~n~~~~~~N~~L~~ 223 (315)
T cd01837 150 TRQYEVEAYVPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFG------GDGGGCLEELNELARLFNAKLKK 223 (315)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhcC------CCCCCcCHHHHHHHHHHHHHHHH
Confidence 2 2345678999999999999999999999999999999999999886532 12468999999999999999999
Q ss_pred HHHHHHhhCCCcEEEEEeccHHHHHHHhCcCCCCCccCCcCchhh
Q 021232 260 ELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGQLIATLNSTSL 304 (315)
Q Consensus 260 ~l~~L~~~~~g~~i~~~D~~~~~~~i~~nP~~yGf~~~t~~~~~~ 304 (315)
+|++|++++|+++|+++|+|.+++++++||++|||++++++||+.
T Consensus 224 ~l~~l~~~~~~~~i~~~D~y~~~~~i~~np~~yGf~~~~~aCc~~ 268 (315)
T cd01837 224 LLAELRRELPGAKFVYADIYNALLDLIQNPAKYGFENTLKACCGT 268 (315)
T ss_pred HHHHHHhcCCCcEEEEEehhHHHHHHHhChhhcCCcCCCcCccCC
Confidence 999999999999999999999999999999999999999999964
No 3
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=1.2e-50 Score=382.81 Aligned_cols=218 Identities=23% Similarity=0.275 Sum_probs=181.5
Q ss_pred CcccEEEEcCCcccccCCCCCcCCCcCCCCCCCCCCCCCCCCCccccCCCchhHHHhHhhcCCCCCCcccccccCCCCCC
Q 021232 21 LKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKH 100 (315)
Q Consensus 21 ~~~~~l~vFGDSlsD~Gn~~~~~~~~~p~~~~~PyG~~~~~~~~GRfSnG~~~~d~la~~lgl~~~p~yl~~~~~~~~~~ 100 (315)
..|++||+||||+||+||+.+..+. ...||||++| +||||||++|+|||| .|||+. .+
T Consensus 140 ~~~~ai~vFGDSlsDtGnn~y~~t~----~~~PPyG~~f----tGRFSNG~v~~DfLA-------~~pyl~-------~~ 197 (408)
T PRK15381 140 GDITRLVFFGDSLSDSLGRMFEKTH----HILPSYGQYF----GGRFTNGFTWTEFLS-------SPHFLG-------KE 197 (408)
T ss_pred CCCCeEEEeCCccccCCCccccccc----cCCCCCCCCC----CcccCCCchhhheec-------cccccC-------CC
Confidence 4799999999999999887654331 3579999987 899999999999999 366765 16
Q ss_pred CcceeeeeccccccccccccccccccccCCCHHHHHHHHHHHHHHhhcchhhhHhhhccCeEEEeeecccccccccccCc
Q 021232 101 GVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGE 180 (315)
Q Consensus 101 G~NfA~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~g~~~~~~~~~~sL~~i~~iG~ND~~~~~~~~~ 180 (315)
|+|||+|||++.....+ ..+ ....+++..||++|+. .+++||+| |+|+|||+..
T Consensus 198 G~NFA~GGA~~~t~~~~--~~~---~~~~~~L~~Qv~~~~~---------------~~~aL~lV-~iG~NDy~~~----- 251 (408)
T PRK15381 198 MLNFAEGGSTSASYSCF--NCI---GDFVSNTDRQVASYTP---------------SHQDLAIF-LLGANDYMTL----- 251 (408)
T ss_pred CceEeeccccccccccc--ccc---cCccCCHHHHHHHHHh---------------cCCcEEEE-EeccchHHHh-----
Confidence 89999999999743211 001 0123689999998642 15799999 9999999832
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHH
Q 021232 181 SINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAE 260 (315)
Q Consensus 181 ~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~ 260 (315)
..++++.+++++.++|++||++|||||+|+|+||+||+|..+.. ...+.+|++++.||++|+++
T Consensus 252 ----~~~~v~~vV~~~~~~l~~Ly~lGARk~vV~nlpPlGC~P~~~~~------------~~~~~~N~~a~~fN~~L~~~ 315 (408)
T PRK15381 252 ----HKDNVIMVVEQQIDDIEKIISGGVNNVLVMGIPDLSLTPYGKHS------------DEKRKLKDESIAHNALLKTN 315 (408)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCcchhhcc------------CchHHHHHHHHHHHHHHHHH
Confidence 12357789999999999999999999999999999999987631 12478999999999999999
Q ss_pred HHHHHhhCCCcEEEEEeccHHHHHHHhCcCCCCCccCCcCchh
Q 021232 261 LHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGQLIATLNSTS 303 (315)
Q Consensus 261 l~~L~~~~~g~~i~~~D~~~~~~~i~~nP~~yGf~~~t~~~~~ 303 (315)
|++|++++||++|+++|+|.++++|++||++|||++++. ||+
T Consensus 316 L~~L~~~~pg~~ivy~D~y~~~~~ii~nP~~yGF~~~~~-cCg 357 (408)
T PRK15381 316 VEELKEKYPQHKICYYETADAFKVIMEAASNIGYDTENP-YTH 357 (408)
T ss_pred HHHHHHhCCCCEEEEEEhHHHHHHHHhCHHhcCCCcccc-ccC
Confidence 999999999999999999999999999999999999987 875
No 4
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=9.3e-50 Score=364.90 Aligned_cols=233 Identities=21% Similarity=0.181 Sum_probs=190.5
Q ss_pred ccEEEEcCCcccccCCCCCcCCCcCCCCCCCCCCCCCCCCCccccCCCchhHHHhHhhcCCCCCCcccccccCCCCCCCc
Q 021232 23 YHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGV 102 (315)
Q Consensus 23 ~~~l~vFGDSlsD~Gn~~~~~~~~~p~~~~~PyG~~~~~~~~GRfSnG~~~~d~la~~lgl~~~p~yl~~~~~~~~~~G~ 102 (315)
|++|||||||++|+||++++. + +++|+||||||++++|++++.+|++.+ +.. ...+..+|+
T Consensus 1 ~~~i~vFGDSl~D~Gn~~~~~----------~-----~~~~~gRFsnG~~~~d~~~~~~~~~~~---~~~-~~~~~~~G~ 61 (281)
T cd01847 1 FSRVVVFGDSLSDVGTYNRAG----------V-----GAAGGGRFTVNDGSIWSLGVAEGYGLT---TGT-ATPTTPGGT 61 (281)
T ss_pred CCceEEecCcccccCCCCccc----------c-----CCCCCcceecCCcchHHHHHHHHcCCC---cCc-CcccCCCCc
Confidence 578999999999999998652 1 124699999999999999999998753 121 234678899
Q ss_pred ceeeeeccccccccccccccccccccCCCHHHHHHHHHHHHHHhhcchhhhHhhhccCeEEEeeecccccccccccCcc-
Q 021232 103 NFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGES- 181 (315)
Q Consensus 103 NfA~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~g~~~~~~~~~~sL~~i~~iG~ND~~~~~~~~~~- 181 (315)
|||+|||++.+.+.+.. . ....+++.+||++|++.+. ...+++||+| |||+|||...+....+
T Consensus 62 NfA~gGa~~~~~~~~~~--~---~~~~~~l~~Qv~~f~~~~~----------~~~~~sL~~i-~iG~ND~~~~~~~~~~~ 125 (281)
T cd01847 62 NYAQGGARVGDTNNGNG--A---GAVLPSVTTQIANYLAAGG----------GFDPNALYTV-WIGGNDLIAALAALTTA 125 (281)
T ss_pred eeeccCccccCCCCccc--c---ccCCCCHHHHHHHHHHhcC----------CCCCCeEEEE-ecChhHHHHHHhhcccc
Confidence 99999999987542100 0 0134689999999987542 2368999999 9999999865422111
Q ss_pred ---hhhhhhhHHHHHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHH
Q 021232 182 ---INQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLK 258 (315)
Q Consensus 182 ---~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~ 258 (315)
..++.++++.+++++..++++||++|||+|+|+++||+||+|.++... ..|.+.+|++++.||++|+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~----------~~~~~~~n~~~~~~N~~L~ 195 (281)
T cd01847 126 TTTQAAAVAAAATAAADLASQVKNLLDAGARYILVPNLPDVSYTPEAAGTP----------AAAAALASALSQTYNQTLQ 195 (281)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCcccCcchhhcc----------chhHHHHHHHHHHHHHHHH
Confidence 234667899999999999999999999999999999999999987531 3588999999999999999
Q ss_pred HHHHHHHhhCCCcEEEEEeccHHHHHHHhCcCCCCCccCCcCchhh
Q 021232 259 AELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGQLIATLNSTSL 304 (315)
Q Consensus 259 ~~l~~L~~~~~g~~i~~~D~~~~~~~i~~nP~~yGf~~~t~~~~~~ 304 (315)
++|++|+++ +|+++|+|.++++|++||++|||++++++||+.
T Consensus 196 ~~l~~l~~~----~i~~~D~~~~~~~i~~nP~~yGf~~~~~~CC~~ 237 (281)
T cd01847 196 SGLNQLGAN----NIIYVDTATLLKEVVANPAAYGFTNTTTPACTS 237 (281)
T ss_pred HHHHhccCC----eEEEEEHHHHHHHHHhChHhcCccCCCccccCC
Confidence 999999764 899999999999999999999999999999984
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=1.3e-44 Score=328.59 Aligned_cols=231 Identities=25% Similarity=0.247 Sum_probs=187.4
Q ss_pred EEEEcCCcccccCCCCCcCCCcCCCCCCCCCCCCCCCCCccccCCCchhHHHhHhhcCCCCCCcccccccCCCCCCCcce
Q 021232 25 AIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNF 104 (315)
Q Consensus 25 ~l~vFGDSlsD~Gn~~~~~~~~~p~~~~~PyG~~~~~~~~GRfSnG~~~~d~la~~lgl~~~p~yl~~~~~~~~~~G~Nf 104 (315)
+||+|||||||+||...+... ..+|.+. ..|+||||||++|+|+||+.+|++. ...|+||
T Consensus 1 ~l~vFGDS~sD~Gn~~~~~~~-----~~~~~~~---~~~~grfsnG~~w~d~la~~lg~~~------------~~~~~N~ 60 (270)
T cd01846 1 RLVVFGDSLSDTGNIFKLTGG-----SNPPPSP---PYFGGRFSNGPVWVEYLAATLGLSG------------LKQGYNY 60 (270)
T ss_pred CeEEeeCccccCCcchhhcCC-----CCCCCCC---CCCCCccCCchhHHHHHHHHhCCCc------------cCCccee
Confidence 489999999999998765431 1122222 2368999999999999999999753 1357999
Q ss_pred eeeeccccccccccccccccccccCCCHHHHHHHHHHHHHHhhcchhhhHhhhccCeEEEeeecccccccccccCcchhh
Q 021232 105 AVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQ 184 (315)
Q Consensus 105 A~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~g~~~~~~~~~~sL~~i~~iG~ND~~~~~~~~~~~~~ 184 (315)
|+|||++.+.... .. .....++..||++|++.... +..+++|++| |+|+||+...+.. ...
T Consensus 61 A~~Ga~~~~~~~~---~~---~~~~~~l~~Qv~~f~~~~~~---------~~~~~~l~~i-~~G~ND~~~~~~~---~~~ 121 (270)
T cd01846 61 AVGGATAGAYNVP---PY---PPTLPGLSDQVAAFLAAHKL---------RLPPDTLVAI-WIGANDLLNALDL---PQN 121 (270)
T ss_pred EecccccCCcccC---CC---CCCCCCHHHHHHHHHHhccC---------CCCCCcEEEE-Eeccchhhhhccc---ccc
Confidence 9999999865321 00 12346899999999876431 2357799999 9999999875422 123
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHHHH
Q 021232 185 LRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKL 264 (315)
Q Consensus 185 ~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L 264 (315)
....++.+++++.+.|++|+++|+|+|+|+++||++|+|.++.... ...+.++.+++.||++|++++++|
T Consensus 122 ~~~~~~~~~~~~~~~i~~l~~~g~~~i~v~~~p~~~~~P~~~~~~~----------~~~~~~~~~~~~~N~~L~~~l~~l 191 (270)
T cd01846 122 PDTLVTRAVDNLFQALQRLYAAGARNFLVLNLPDLGLTPAFQAQGD----------AVAARATALTAAYNAKLAEKLAEL 191 (270)
T ss_pred ccccHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccCCc----------ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 4467889999999999999999999999999999999999876421 012689999999999999999999
Q ss_pred HhhCCCcEEEEEeccHHHHHHHhCcCCCCCccCCcCchhh
Q 021232 265 RQKYPHANIIYADYYGAAMRFYHAPGHYGQLIATLNSTSL 304 (315)
Q Consensus 265 ~~~~~g~~i~~~D~~~~~~~i~~nP~~yGf~~~t~~~~~~ 304 (315)
++++|+++|+++|+|.++.++++||++|||++++++||+.
T Consensus 192 ~~~~~~~~i~~~D~~~~~~~~~~~p~~yGf~~~~~~C~~~ 231 (270)
T cd01846 192 KAQHPGVNILLFDTNALFNDILDNPAAYGFTNVTDPCLDY 231 (270)
T ss_pred HHhCCCCeEEEEEhHHHHHHHHhCHHhcCCCcCcchhcCC
Confidence 9999999999999999999999999999999999999974
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=99.96 E-value=5e-29 Score=227.62 Aligned_cols=253 Identities=20% Similarity=0.192 Sum_probs=175.2
Q ss_pred CCCcccEEEEcCCcccccCCCCCcCCCcCCCCCCC-CCCCCCCCCCccccCC--CchhHHHhHhhcCC-CCCCcccccc-
Q 021232 19 SHLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKL-PYGETFFRHATGRCSD--GRLVIDFMAEAFRL-PYLPPYLALK- 93 (315)
Q Consensus 19 ~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~p~~~~~-PyG~~~~~~~~GRfSn--G~~~~d~la~~lgl-~~~p~yl~~~- 93 (315)
+.++|+.++||||||||+|+....... ...+ -|| ..+..++++ |..|+++.++.+|. ...+.++...
T Consensus 25 ~~~~~~~l~vfGDSlSDsg~~~~~a~~----~~~~~~~~----~~~gp~~~~G~~~~~~~~~p~~lg~l~~~~~~~~~~~ 96 (370)
T COG3240 25 SLAPFQRLVVFGDSLSDSGNYYRPAGH----HGDPGSYG----TIPGPSYQNGNGYTYVTVVPETLGQLGVNHDFTYAAA 96 (370)
T ss_pred cccccceEEEeccchhhcccccCcccc----cCCccccc----cccCCcccCCCceeeeccchhhhcccccccccccccc
Confidence 456899999999999999998865431 1122 122 123334444 67788888888881 1111111110
Q ss_pred --cCCCC--CCCcceeeeeccccccccccccccccccccCCCHHHHHHHHHHHHHHhhcc-hhhhHhhhccCeEEEeeec
Q 021232 94 --EGQNF--KHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICST-RKDCETYFKKSLFFVGEIG 168 (315)
Q Consensus 94 --~~~~~--~~G~NfA~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~g-~~~~~~~~~~sL~~i~~iG 168 (315)
.+..+ ..|.|||+|||++....... .+ .....++.+|+.+|+.......-. ..+.-......|+.+ |.|
T Consensus 97 ~~~~~~~~~a~gnd~A~gga~~~~~~~~~--~i---~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~~~-~gg 170 (370)
T COG3240 97 DPNGLYIHWAGGNDLAVGGARSTEPNTGN--SI---GASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALYFL-WGG 170 (370)
T ss_pred CcccccCcccccccHhhhccccccccccc--cc---cccccchHHHHHHHHHhcCCccccccccccccCHHHHHHH-hhc
Confidence 12222 57999999999987654110 01 234578999999998775431100 001112245678889 999
Q ss_pred ccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhH
Q 021232 169 GNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNA 248 (315)
Q Consensus 169 ~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~ 248 (315)
+||++..-..+ ....+.+.....+.+...|++|.++|||+++|+++|+++.+|...... .-.+.+.+
T Consensus 171 and~~~~~~~~--a~~~q~~~~~~~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~~-----------~~~~~a~~ 237 (370)
T COG3240 171 ANDYLALPMLK--AAAYQQLEGSTKADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAYG-----------TEAIQASQ 237 (370)
T ss_pred chhhhcccccc--hhhhHHHhcchhhHHHHHHHHHHHhhccEEEEeecccccccccccccc-----------chHHHHHH
Confidence 99998752111 111222344446789999999999999999999999999999887521 12237889
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHHHHhCcCCCCCccCCcCchh
Q 021232 249 FARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGQLIATLNSTS 303 (315)
Q Consensus 249 ~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~i~~nP~~yGf~~~t~~~~~ 303 (315)
.+..||+.|...|++++ .+|+.+|++.++++|+.||++|||+|++..||.
T Consensus 238 ~t~~~Na~L~~~L~~~g-----~nIi~iD~~~llk~im~nPa~fGlant~~~~c~ 287 (370)
T COG3240 238 ATIAFNASLTSQLEQLG-----GNIIRIDTYTLLKEIMTNPAEFGLANTTAPACD 287 (370)
T ss_pred HHHHHHHHHHHHHHHhc-----CcEEEeEhHHHHHHHHhCHHhcCcccCCCcccC
Confidence 99999999999999875 799999999999999999999999999988864
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.82 E-value=5.3e-20 Score=161.79 Aligned_cols=209 Identities=27% Similarity=0.340 Sum_probs=141.4
Q ss_pred EEEcCCcccccCCCCCcCCCcCCCCCCCCCCCCCCCCCccccCCCchhHHHhHhhcCCCCCCcccccccCCCCCCCccee
Q 021232 26 IFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFA 105 (315)
Q Consensus 26 l~vFGDSlsD~Gn~~~~~~~~~p~~~~~PyG~~~~~~~~GRfSnG~~~~d~la~~lgl~~~p~yl~~~~~~~~~~G~NfA 105 (315)
|++||||+||. +|+++|.+|.+.++..+.-... + . ....-..+.|+|
T Consensus 1 i~~fGDS~td~----------------------------~~~~~~~~~~~~~~~~l~~~~~--~-~--~~~~~~~~~n~a 47 (234)
T PF00657_consen 1 IVVFGDSLTDG----------------------------GGDSNGGGWPEGLANNLSSCLG--A-N--QRNSGVDVSNYA 47 (234)
T ss_dssp EEEEESHHHHT----------------------------TTSSTTCTHHHHHHHHCHHCCH--H-H--HHCTTEEEEEEE
T ss_pred CEEEeehhccc----------------------------CCCCCCcchhhhHHHHHhhccc--c-c--cCCCCCCeeccc
Confidence 68999999999 1246788999999887721110 0 0 001113457999
Q ss_pred eeeccccccccccccccccccccCCCHHHHHHHHHHHHHHhhcchhhhHhhhccCeEEEeeecccccccccccCcchhhh
Q 021232 106 VAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQL 185 (315)
Q Consensus 106 ~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~g~~~~~~~~~~sL~~i~~iG~ND~~~~~~~~~~~~~~ 185 (315)
++|+++..... ... .....+..|+...... ....+.+|++| |+|+||++.... ....
T Consensus 48 ~~G~~~~~~~~----~~~---~~~~~~~~~~~~~~~~-----------~~~~~~~lv~i-~~G~ND~~~~~~----~~~~ 104 (234)
T PF00657_consen 48 ISGATSDGDLY----NLW---AQVQNISQQISRLLDS-----------KSFYDPDLVVI-WIGTNDYFNNRD----SSDN 104 (234)
T ss_dssp -TT--CC-HGG----CCC---CTCHHHHHHHHHHHHH-----------HHHHTTSEEEE-E-SHHHHSSCCS----CSTT
T ss_pred cCCCccccccc----hhh---HHHHHHHHHhhccccc-----------cccCCcceEEE-ecccCcchhhcc----cchh
Confidence 99999764321 000 0001122333222111 12356789999 999999875211 1122
Q ss_pred hhhHHHHHHHHHHHHHHHHHhCCc-----EEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHH
Q 021232 186 RASVPLVVKAITNATRLLIEEGAV-----ELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAE 260 (315)
Q Consensus 186 ~~~v~~~v~~i~~~i~~L~~~GAR-----~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~ 260 (315)
...++.+++.+.+.|++|++.|+| +++++++||++|.|....... +...|.+.+++.++.||++|++.
T Consensus 105 ~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~n~~l~~~ 177 (234)
T PF00657_consen 105 NTSVEEFVENLRNAIKRLRSNGARLIIVANIVVINLPPIGCLPAWSSNNK-------DSASCIERLNAIVAAFNSALREV 177 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEHHC-GGGSTTHHHTHT-------TTCTTHHHHHHHHHHHHHHHHHH
T ss_pred hhhHhhHhhhhhhhhhHHhccCCccccccccccccccccccccccccccc-------cccccchhhHHHHHHHHHHHHHH
Confidence 345778899999999999999999 999999999999988765432 24679999999999999999999
Q ss_pred HHHHHhhCC-CcEEEEEeccHHHHHH--HhCcC--CCCCccC
Q 021232 261 LHKLRQKYP-HANIIYADYYGAAMRF--YHAPG--HYGQLIA 297 (315)
Q Consensus 261 l~~L~~~~~-g~~i~~~D~~~~~~~i--~~nP~--~yGf~~~ 297 (315)
+++|++.++ +.++.++|++..+.++ ..+|. +|-|-+.
T Consensus 178 ~~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~D~ 219 (234)
T PF00657_consen 178 AAQLRKDYPKGANVPYFDIYSIFSDMYGIQNPENDKYMFWDG 219 (234)
T ss_dssp HHHHHHCHHHHCTEEEEEHHHHHHHHHHHHHGGHHHCBBSSS
T ss_pred hhhcccccccCCceEEEEHHHHHHHhhhccCcccceeccCCC
Confidence 999988776 8899999999999999 78886 4444433
No 8
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.59 E-value=5.7e-07 Score=78.32 Aligned_cols=155 Identities=12% Similarity=0.082 Sum_probs=84.7
Q ss_pred ccCCCchhHHHhHhhcCCCCCCcccccccCCCCCCCcceeeeeccccccccccccccccccccCCCHHHHHHHHHHHHHH
Q 021232 66 RCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSS 145 (315)
Q Consensus 66 RfSnG~~~~d~la~~lgl~~~p~yl~~~~~~~~~~G~NfA~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~ 145 (315)
|++.+..|+..|++.|+-.. +++ .-+|.+++|.++...... . ....-++.+.+....
T Consensus 20 ~~~~~~~w~~~L~~~l~~~~-~~~----------~viN~Gv~G~tt~~~~~~---------~---~~~~~l~~l~~~l~~ 76 (208)
T cd01839 20 RYPFEDRWPGVLEKALGANG-ENV----------RVIEDGLPGRTTVLDDPF---------F---PGRNGLTYLPQALES 76 (208)
T ss_pred cCCcCCCCHHHHHHHHccCC-CCe----------EEEecCcCCcceeccCcc---------c---cCcchHHHHHHHHHh
Confidence 45567789999999986442 111 126999999887422100 0 001111222221110
Q ss_pred hhcchhhhHhhhccCeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHh------CCcEEEEcCCCCc
Q 021232 146 ICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEE------GAVELVVPGNFPI 219 (315)
Q Consensus 146 ~~~g~~~~~~~~~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~------GAR~fvv~~lppl 219 (315)
...-++++| ++|.||+.... +.+. ....+++.+.++++.+. +..++++++.||+
T Consensus 77 ----------~~~pd~vii-~lGtND~~~~~--~~~~-------~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~ 136 (208)
T cd01839 77 ----------HSPLDLVII-MLGTNDLKSYF--NLSA-------AEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPI 136 (208)
T ss_pred ----------CCCCCEEEE-ecccccccccc--CCCH-------HHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCcc
Confidence 023367888 99999987432 1121 23344444445555443 4677888888887
Q ss_pred ccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHH
Q 021232 220 GCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAM 283 (315)
Q Consensus 220 gc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~ 283 (315)
...+... ..+....++..+.||+.+++..++. ++.++|.+.++.
T Consensus 137 ~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~~ 180 (208)
T cd01839 137 RTPKGSL-------------AGKFAGAEEKSKGLADAYRALAEEL-------GCHFFDAGSVGS 180 (208)
T ss_pred Cccccch-------------hhhhccHHHHHHHHHHHHHHHHHHh-------CCCEEcHHHHhc
Confidence 2221100 1233345677788888887766543 366889877653
No 9
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=98.56 E-value=1.1e-06 Score=74.84 Aligned_cols=155 Identities=21% Similarity=0.138 Sum_probs=90.5
Q ss_pred EEEEcCCcccccCCCCCcCCCcCCCCCCCCCCCCCCCCCccccCCCchhHHHhHhhcCCCCCCcccccccCCCCCCCcce
Q 021232 25 AIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNF 104 (315)
Q Consensus 25 ~l~vFGDSlsD~Gn~~~~~~~~~p~~~~~PyG~~~~~~~~GRfSnG~~~~d~la~~lgl~~~p~yl~~~~~~~~~~G~Nf 104 (315)
+|++||||+++ |..... ....+..|++.+++.+.-+. +. ..-.|.
T Consensus 1 ~i~~~GDSit~-G~~~~~-----------------------~~~~~~~~~~~l~~~l~~~~-~~----------~~~~N~ 45 (185)
T cd01832 1 RYVALGDSITE-GVGDPV-----------------------PDGGYRGWADRLAAALAAAD-PG----------IEYANL 45 (185)
T ss_pred CeeEecchhhc-ccCCCC-----------------------CCCccccHHHHHHHHhcccC-CC----------ceEeec
Confidence 37899999998 332210 01235679999999885421 11 112699
Q ss_pred eeeeccccccccccccccccccccCCCHHHHHHHHHHHHHHhhcchhhhHhhhccCeEEEeeecccccccccccCcchhh
Q 021232 105 AVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQ 184 (315)
Q Consensus 105 A~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~g~~~~~~~~~~sL~~i~~iG~ND~~~~~~~~~~~~~ 184 (315)
+++|+++... +..|+..-. . ..-.+++| ++|.||.... ..+
T Consensus 46 g~~G~~~~~~-----------------~~~~~~~~~--------------~-~~~d~vii-~~G~ND~~~~---~~~--- 86 (185)
T cd01832 46 AVRGRRTAQI-----------------LAEQLPAAL--------------A-LRPDLVTL-LAGGNDILRP---GTD--- 86 (185)
T ss_pred cCCcchHHHH-----------------HHHHHHHHH--------------h-cCCCEEEE-eccccccccC---CCC---
Confidence 9999875310 122322110 0 12257788 8999998641 111
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhCCcEEEEcCCCCc-ccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHHH
Q 021232 185 LRASVPLVVKAITNATRLLIEEGAVELVVPGNFPI-GCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHK 263 (315)
Q Consensus 185 ~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~lppl-gc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~ 263 (315)
..+..+++...|+++...+++ ++++++||. +..|.. ...++..+.+|+.|++..++
T Consensus 87 ----~~~~~~~~~~~i~~i~~~~~~-vil~~~~~~~~~~~~~------------------~~~~~~~~~~n~~l~~~a~~ 143 (185)
T cd01832 87 ----PDTYRADLEEAVRRLRAAGAR-VVVFTIPDPAVLEPFR------------------RRVRARLAAYNAVIRAVAAR 143 (185)
T ss_pred ----HHHHHHHHHHHHHHHHhCCCE-EEEecCCCccccchhH------------------HHHHHHHHHHHHHHHHHHHH
Confidence 234455666666666666775 777888887 322211 12344577788888776553
Q ss_pred HHhhCCCcEEEEEeccHHHH
Q 021232 264 LRQKYPHANIIYADYYGAAM 283 (315)
Q Consensus 264 L~~~~~g~~i~~~D~~~~~~ 283 (315)
. ++.++|++..+.
T Consensus 144 ~-------~v~~vd~~~~~~ 156 (185)
T cd01832 144 Y-------GAVHVDLWEHPE 156 (185)
T ss_pred c-------CCEEEecccCcc
Confidence 2 467889887653
No 10
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.43 E-value=3.1e-06 Score=72.48 Aligned_cols=93 Identities=18% Similarity=0.117 Sum_probs=58.1
Q ss_pred CeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHH-hCCcEEEEcCCCCcccccchhhhhccCCcCCCC
Q 021232 160 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIE-EGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYD 238 (315)
Q Consensus 160 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~-~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d 238 (315)
.+++| .+|+||+.... + ..+..+++.+.++++.+ ....++++.++||+++.|....
T Consensus 69 d~Vii-~~G~ND~~~~~----~-------~~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~~~~~~~~----------- 125 (191)
T cd01836 69 DVAVI-SIGVNDVTHLT----S-------IARWRKQLAELVDALRAKFPGARVVVTAVPPLGRFPALPQ----------- 125 (191)
T ss_pred CEEEE-EecccCcCCCC----C-------HHHHHHHHHHHHHHHHhhCCCCEEEEECCCCcccCCCCcH-----------
Confidence 57777 89999986421 1 23455566666666665 3567899999999887653211
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHH
Q 021232 239 RNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAM 283 (315)
Q Consensus 239 ~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~ 283 (315)
......++..+.+|+.+++..++ ++ .+.++|++..+.
T Consensus 126 --~~~~~~~~~~~~~n~~~~~~a~~----~~--~~~~id~~~~~~ 162 (191)
T cd01836 126 --PLRWLLGRRARLLNRALERLASE----AP--RVTLLPATGPLF 162 (191)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHhc----CC--CeEEEecCCccc
Confidence 01123455566777776655543 33 456789988763
No 11
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=98.32 E-value=1.4e-05 Score=71.90 Aligned_cols=169 Identities=14% Similarity=0.049 Sum_probs=87.3
Q ss_pred CchhHHHhHhhcCCCCCCcccccccCCCCCCCcceeeeeccccccccccccccccccccCCCHHHHHHHHHHHHHHhhcc
Q 021232 70 GRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICST 149 (315)
Q Consensus 70 G~~~~d~la~~lgl~~~p~yl~~~~~~~~~~G~NfA~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~g 149 (315)
...|++++++.|+... ..-.|+|.+|+++.+... ........|.. .+.
T Consensus 31 ~~~y~~~la~~l~~~~-------------~~~~n~a~sGa~~~~~~~----------~~~~~~~~~~~-------~l~-- 78 (259)
T cd01823 31 SNSYPTLLARALGDET-------------LSFTDVACSGATTTDGIE----------PQQGGIAPQAG-------ALD-- 78 (259)
T ss_pred CccHHHHHHHHcCCCC-------------ceeeeeeecCcccccccc----------cccCCCchhhc-------ccC--
Confidence 4679999999998530 112699999999865321 00011111211 110
Q ss_pred hhhhHhhhccCeEEEeeeccccccccccc-----Cc-----------chhhhhhhHHHHHHHHHHHHHHHHHh-CCcEEE
Q 021232 150 RKDCETYFKKSLFFVGEIGGNDYNYRAFV-----GE-----------SINQLRASVPLVVKAITNATRLLIEE-GAVELV 212 (315)
Q Consensus 150 ~~~~~~~~~~sL~~i~~iG~ND~~~~~~~-----~~-----------~~~~~~~~v~~~v~~i~~~i~~L~~~-GAR~fv 212 (315)
..-.+++| .+|+||+...... .. .........+...+++.+.|++|.+. .--+|+
T Consensus 79 -------~~~dlV~i-~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~ 150 (259)
T cd01823 79 -------PDTDLVTI-TIGGNDLGFADVVKACILTGGGSSLAQEKGAADGARDAALDEVGARLKAVLDRIRERAPNARVV 150 (259)
T ss_pred -------CCCCEEEE-EECccccchHHHHHHHhhccCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEE
Confidence 12468888 8999998643110 00 00011222445556666666666653 345688
Q ss_pred EcCCCCcccccchhhhhc-cCCcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHH
Q 021232 213 VPGNFPIGCSAVYLTLFQ-SLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMR 284 (315)
Q Consensus 213 v~~lpplgc~P~~~~~~~-~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~ 284 (315)
+++.|++--. -..... .......-.....+..++..+.+|+.+++..++ +...++.++|++..+..
T Consensus 151 ~~gyp~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~i~~~a~~----~~~~~v~fvD~~~~f~~ 217 (259)
T cd01823 151 VVGYPRLFPP--DGGDCDKSCSPGTPLTPADRPELNQLVDKLNALIRRAAAD----AGDYKVRFVDTDAPFAG 217 (259)
T ss_pred EecccccccC--CCCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHH----hCCceEEEEECCCCcCC
Confidence 8888775210 000000 000000000012235566677777776665544 33367889999987753
No 12
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.22 E-value=4.6e-05 Score=64.66 Aligned_cols=92 Identities=15% Similarity=0.227 Sum_probs=56.8
Q ss_pred CeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCC
Q 021232 160 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDR 239 (315)
Q Consensus 160 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~ 239 (315)
.++++ .+|.||..... + ..+..+.+.+.++.+.+.|++ ++++..+|....+...
T Consensus 61 d~v~i-~~G~ND~~~~~----~-------~~~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~~------------- 114 (183)
T cd04501 61 AVVII-MGGTNDIIVNT----S-------LEMIKDNIRSMVELAEANGIK-VILASPLPVDDYPWKP------------- 114 (183)
T ss_pred CEEEE-EeccCccccCC----C-------HHHHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccch-------------
Confidence 57778 89999986421 1 223455666666777777876 5555666654332210
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHHHH
Q 021232 240 NGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFY 286 (315)
Q Consensus 240 ~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~i~ 286 (315)
+....++....||+.+++..++ ..+.++|.+..+.+.-
T Consensus 115 --~~~~~~~~~~~~n~~~~~~a~~-------~~v~~vd~~~~~~~~~ 152 (183)
T cd04501 115 --QWLRPANKLKSLNRWLKDYARE-------NGLLFLDFYSPLLDER 152 (183)
T ss_pred --hhcchHHHHHHHHHHHHHHHHH-------cCCCEEechhhhhccc
Confidence 1123355667788877766543 1478999999877643
No 13
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.17 E-value=7.2e-05 Score=63.39 Aligned_cols=89 Identities=18% Similarity=0.125 Sum_probs=50.4
Q ss_pred CeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCC-cEEEEcCCCCcccccchhhhhccCCcCCCC
Q 021232 160 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGA-VELVVPGNFPIGCSAVYLTLFQSLNEMDYD 238 (315)
Q Consensus 160 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GA-R~fvv~~lpplgc~P~~~~~~~~~~~~~~d 238 (315)
.+++| .+|+||.... .+..+++.+.+++|.+..- .++++++.+|. |.....
T Consensus 59 d~vii-~~G~ND~~~~--------------~~~~~~~~~~i~~i~~~~p~~~iil~~~~~~---~~~~~~---------- 110 (177)
T cd01844 59 DLYII-DCGPNIVGAE--------------AMVRERLGPLVKGLRETHPDTPILLVSPRYC---PDAELT---------- 110 (177)
T ss_pred CEEEE-EeccCCCccH--------------HHHHHHHHHHHHHHHHHCcCCCEEEEecCCC---CccccC----------
Confidence 57778 8999996421 0456677777888877653 45777776664 221110
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHH
Q 021232 239 RNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAA 282 (315)
Q Consensus 239 ~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~ 282 (315)
.......++....+ .+.+++++++ .+-++.++|.+.++
T Consensus 111 -~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~v~~id~~~~~ 148 (177)
T cd01844 111 -PGRGKLTLAVRRAL----REAFEKLRAD-GVPNLYYLDGEELL 148 (177)
T ss_pred -cchhHHHHHHHHHH----HHHHHHHHhc-CCCCEEEecchhhc
Confidence 01122333434444 4444444433 23478899987665
No 14
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.06 E-value=0.0001 Score=63.89 Aligned_cols=56 Identities=11% Similarity=0.036 Sum_probs=35.8
Q ss_pred CeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCCcEEEEcCCCCcc
Q 021232 160 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIG 220 (315)
Q Consensus 160 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~lpplg 220 (315)
.+++| .+|.||+........ .....++...+++.+-++++.+.|+ ++++.+++|..
T Consensus 76 ~~vii-~~G~ND~~~~~~~~~---~~~~~~~~~~~~l~~ii~~~~~~~~-~vil~t~~P~~ 131 (204)
T cd01830 76 RTVII-LEGVNDIGASGTDFA---AAPVTAEELIAGYRQLIRRAHARGI-KVIGATITPFE 131 (204)
T ss_pred CEEEE-ecccccccccccccc---cCCCCHHHHHHHHHHHHHHHHHCCC-eEEEecCCCCC
Confidence 46777 899999865321100 0111244567778888888888887 47777888753
No 15
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=98.04 E-value=8e-05 Score=63.63 Aligned_cols=103 Identities=12% Similarity=0.068 Sum_probs=57.7
Q ss_pred ccCeEEEeeeccccccccccc-CcchhhhhhhHHHHHHHHHHHHHHHHH--hCCcEEEEcCCCCcccccchhhhhccCCc
Q 021232 158 KKSLFFVGEIGGNDYNYRAFV-GESINQLRASVPLVVKAITNATRLLIE--EGAVELVVPGNFPIGCSAVYLTLFQSLNE 234 (315)
Q Consensus 158 ~~sL~~i~~iG~ND~~~~~~~-~~~~~~~~~~v~~~v~~i~~~i~~L~~--~GAR~fvv~~lpplgc~P~~~~~~~~~~~ 234 (315)
.-.+++| ++|.||....... ..+ .....+++.+.|+++-+ .|+ ++++++.||.+........ .
T Consensus 63 ~pd~vii-~~G~ND~~~~~~~~~~~-------~~~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~-~---- 128 (199)
T cd01838 63 QPDLVTI-FFGANDAALPGQPQHVP-------LDEYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSL-E---- 128 (199)
T ss_pred CceEEEE-EecCccccCCCCCCccc-------HHHHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhh-c----
Confidence 3467888 8999998753210 011 23344455555555555 455 5777788776532211100 0
Q ss_pred CCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHH
Q 021232 235 MDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMR 284 (315)
Q Consensus 235 ~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~ 284 (315)
.........++..+.||+.+++..++ + .+.++|+++.+..
T Consensus 129 ---~~~~~~~~~~~~~~~~~~~~~~~a~~----~---~~~~iD~~~~~~~ 168 (199)
T cd01838 129 ---DGGSQPGRTNELLKQYAEACVEVAEE----L---GVPVIDLWTAMQE 168 (199)
T ss_pred ---cccCCccccHHHHHHHHHHHHHHHHH----h---CCcEEEHHHHHHh
Confidence 00112345567778888877665543 2 3678899988765
No 16
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=98.03 E-value=0.00011 Score=63.21 Aligned_cols=96 Identities=9% Similarity=0.035 Sum_probs=56.6
Q ss_pred cCeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCC
Q 021232 159 KSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYD 238 (315)
Q Consensus 159 ~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d 238 (315)
-++++| .+|.||....... ...-++...+++.+.|+++-+.|++ +++++.+|... +.
T Consensus 66 pdlVii-~~G~ND~~~~~~~------~~~~~~~~~~nl~~ii~~~~~~~~~-~il~tp~~~~~-------~~-------- 122 (198)
T cd01821 66 GDYVLI-QFGHNDQKPKDPE------YTEPYTTYKEYLRRYIAEARAKGAT-PILVTPVTRRT-------FD-------- 122 (198)
T ss_pred CCEEEE-ECCCCCCCCCCCC------CCCcHHHHHHHHHHHHHHHHHCCCe-EEEECCccccc-------cC--------
Confidence 378888 8999998653210 0011345566777777777788886 44555444211 00
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHHHHh
Q 021232 239 RNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYH 287 (315)
Q Consensus 239 ~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~i~~ 287 (315)
.+. ..+.....||+.+++..++. .+.++|.+..+.+..+
T Consensus 123 --~~~-~~~~~~~~~~~~~~~~a~~~-------~~~~vD~~~~~~~~~~ 161 (198)
T cd01821 123 --EGG-KVEDTLGDYPAAMRELAAEE-------GVPLIDLNAASRALYE 161 (198)
T ss_pred --CCC-cccccchhHHHHHHHHHHHh-------CCCEEecHHHHHHHHH
Confidence 000 12233466777777665543 3668999999877654
No 17
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.99 E-value=0.00018 Score=61.22 Aligned_cols=89 Identities=12% Similarity=0.084 Sum_probs=49.1
Q ss_pred CeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCC-cEEEEcCCCCcccccchhhhhccCCcCCCC
Q 021232 160 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGA-VELVVPGNFPIGCSAVYLTLFQSLNEMDYD 238 (315)
Q Consensus 160 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GA-R~fvv~~lpplgc~P~~~~~~~~~~~~~~d 238 (315)
++++| .+|.||..... ... .....+++.+.|+++.+.+. .++++.+.+|.....
T Consensus 69 d~Vii-~~G~ND~~~~~--~~~-------~~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~~~~--------------- 123 (188)
T cd01827 69 NIVII-KLGTNDAKPQN--WKY-------KDDFKKDYETMIDSFQALPSKPKIYICYPIPAYYGD--------------- 123 (188)
T ss_pred CEEEE-EcccCCCCCCC--Ccc-------HHHHHHHHHHHHHHHHHHCCCCeEEEEeCCcccccC---------------
Confidence 67888 89999986421 111 12334566666666666553 467777776643211
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHH
Q 021232 239 RNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAA 282 (315)
Q Consensus 239 ~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~ 282 (315)
..+ ...+...+.+|+.+++..+ ++ .+.++|.+..+
T Consensus 124 -~~~-~~~~~~~~~~~~~~~~~a~----~~---~~~~vD~~~~~ 158 (188)
T cd01827 124 -GGF-INDNIIKKEIQPMIDKIAK----KL---NLKLIDLHTPL 158 (188)
T ss_pred -CCc-cchHHHHHHHHHHHHHHHH----Hc---CCcEEEccccc
Confidence 011 1123344556666555443 32 35678988765
No 18
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=97.96 E-value=9.1e-05 Score=64.04 Aligned_cols=102 Identities=11% Similarity=0.161 Sum_probs=58.9
Q ss_pred cCeEEEeeeccccccccccc---CcchhhhhhhHHHHHHHHHHHHHHHHHhCC-cEEEEcCCC-CcccccchhhhhccCC
Q 021232 159 KSLFFVGEIGGNDYNYRAFV---GESINQLRASVPLVVKAITNATRLLIEEGA-VELVVPGNF-PIGCSAVYLTLFQSLN 233 (315)
Q Consensus 159 ~sL~~i~~iG~ND~~~~~~~---~~~~~~~~~~v~~~v~~i~~~i~~L~~~GA-R~fvv~~lp-plgc~P~~~~~~~~~~ 233 (315)
-.+++| .+|+||+...... +....+...-.....+++.+.|+++.+.+. .++++++++ |.. ...
T Consensus 69 ~d~V~i-~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~p~~-----~~~----- 137 (204)
T cd04506 69 ADVITI-TIGGNDLMQVLEKNFLSLDVEDFKKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLYNPFY-----VYF----- 137 (204)
T ss_pred CCEEEE-EecchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCCccc-----ccc-----
Confidence 357788 8999999754311 101112222244566677777777777653 356666653 221 100
Q ss_pred cCCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHH
Q 021232 234 EMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMR 284 (315)
Q Consensus 234 ~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~ 284 (315)
. -....++.++.||+.+++..++ + -++.++|++..+..
T Consensus 138 ------~-~~~~~~~~~~~~n~~~~~~a~~----~--~~v~~vd~~~~~~~ 175 (204)
T cd04506 138 ------P-NITEINDIVNDWNEASQKLASQ----Y--KNAYFVPIFDLFSD 175 (204)
T ss_pred ------c-hHHHHHHHHHHHHHHHHHHHHh----C--CCeEEEehHHhhcC
Confidence 0 0124577888899887766542 2 24789999987764
No 19
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=97.87 E-value=0.00033 Score=58.80 Aligned_cols=44 Identities=20% Similarity=0.245 Sum_probs=28.5
Q ss_pred CeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCCcEEEEcCC
Q 021232 160 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGN 216 (315)
Q Consensus 160 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~l 216 (315)
.+++| .+|+||..... + .....+++.+.++++.+.|+| ++++++
T Consensus 66 d~v~i-~~G~ND~~~~~----~-------~~~~~~~l~~li~~~~~~~~~-vil~~~ 109 (177)
T cd01822 66 DLVIL-ELGGNDGLRGI----P-------PDQTRANLRQMIETAQARGAP-VLLVGM 109 (177)
T ss_pred CEEEE-eccCcccccCC----C-------HHHHHHHHHHHHHHHHHCCCe-EEEEec
Confidence 57788 89999975321 1 223556677777777777876 455454
No 20
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.86 E-value=0.00019 Score=60.81 Aligned_cols=100 Identities=10% Similarity=-0.013 Sum_probs=62.2
Q ss_pred CeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHH-HhCCcEEEEcCCCCcccccchhhhhccCCcCCCC
Q 021232 160 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLI-EEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYD 238 (315)
Q Consensus 160 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~-~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d 238 (315)
.+++| ++|.||+........ ...+..+++.+.|+.+. .....++++++.+|....+..
T Consensus 63 d~v~l-~~G~ND~~~~~~~~~-------~~~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~------------- 121 (191)
T cd01834 63 DVVSI-MFGINDSFRGFDDPV-------GLEKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDP------------- 121 (191)
T ss_pred CEEEE-EeecchHhhcccccc-------cHHHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCC-------------
Confidence 68888 999999975421011 13345566777777774 334456777776554322110
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHHHHhC
Q 021232 239 RNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHA 288 (315)
Q Consensus 239 ~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~i~~n 288 (315)
..-....++....||+.+++..++ + ++.++|++..+.+....
T Consensus 122 -~~~~~~~~~~~~~~n~~l~~~a~~----~---~~~~iD~~~~~~~~~~~ 163 (191)
T cd01834 122 -LPDGAEYNANLAAYADAVRELAAE----N---GVAFVDLFTPMKEAFQK 163 (191)
T ss_pred -CCChHHHHHHHHHHHHHHHHHHHH----c---CCeEEecHHHHHHHHHh
Confidence 001245667778888888776543 1 37899999999887665
No 21
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=97.82 E-value=0.0001 Score=61.10 Aligned_cols=93 Identities=16% Similarity=0.123 Sum_probs=58.4
Q ss_pred CeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCC
Q 021232 160 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDR 239 (315)
Q Consensus 160 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~ 239 (315)
.+++| .+|+||.... . ......+...+.+.+.++++...+ +++++.+||..-.+..
T Consensus 63 d~vvi-~~G~ND~~~~-~------~~~~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~-------------- 118 (179)
T PF13472_consen 63 DLVVI-SFGTNDVLNG-D------ENDTSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRD-------------- 118 (179)
T ss_dssp SEEEE-E--HHHHCTC-T------TCHHHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTT--------------
T ss_pred CEEEE-Eccccccccc-c------cccccHHHHHHHHHHHHHhhcccC--cEEEecCCCccccccc--------------
Confidence 57888 8999998863 1 111224556777788888887777 8888888775533211
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHH
Q 021232 240 NGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMR 284 (315)
Q Consensus 240 ~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~ 284 (315)
.+..........+|+.+++..++ + .+.++|++..+.+
T Consensus 119 -~~~~~~~~~~~~~~~~~~~~a~~----~---~~~~id~~~~~~~ 155 (179)
T PF13472_consen 119 -PKQDYLNRRIDRYNQAIRELAKK----Y---GVPFIDLFDAFDD 155 (179)
T ss_dssp -THTTCHHHHHHHHHHHHHHHHHH----C---TEEEEEHHHHHBT
T ss_pred -ccchhhhhhHHHHHHHHHHHHHH----c---CCEEEECHHHHcc
Confidence 11334556677788877765443 2 5779999998664
No 22
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.77 E-value=0.00043 Score=58.74 Aligned_cols=91 Identities=10% Similarity=-0.039 Sum_probs=52.2
Q ss_pred CeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHh-CCcEEEEcCCCCcccccchhhhhccCCcCCCC
Q 021232 160 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEE-GAVELVVPGNFPIGCSAVYLTLFQSLNEMDYD 238 (315)
Q Consensus 160 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~-GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d 238 (315)
.+++| .+|.||..... .+ .....+++...++++.+. ...++++++.||....+..
T Consensus 58 d~Vii-~~G~ND~~~~~---~~-------~~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~~------------- 113 (189)
T cd01825 58 DLVIL-SYGTNEAFNKQ---LN-------ASEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTGA------------- 113 (189)
T ss_pred CEEEE-ECCCcccccCC---CC-------HHHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCCC-------------
Confidence 57778 89999975421 11 234556666666777663 4566777777664322210
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHH
Q 021232 239 RNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMR 284 (315)
Q Consensus 239 ~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~ 284 (315)
+....+...+.+|+.+++..+ ++ + +.++|.+..+.+
T Consensus 114 ---~~~~~~~~~~~~~~~~~~~a~----~~-~--v~~vd~~~~~~~ 149 (189)
T cd01825 114 ---GRWRTPPGLDAVIAAQRRVAK----EE-G--IAFWDLYAAMGG 149 (189)
T ss_pred ---CCcccCCcHHHHHHHHHHHHH----Hc-C--CeEEeHHHHhCC
Confidence 111122334666766655543 32 3 678999988754
No 23
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=97.74 E-value=0.00055 Score=58.89 Aligned_cols=42 Identities=19% Similarity=0.187 Sum_probs=29.3
Q ss_pred CeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCCcEEEE
Q 021232 160 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVV 213 (315)
Q Consensus 160 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fvv 213 (315)
.+++| .+|.||.... .+ ..+..+++.+-++++.+.|++.+++
T Consensus 73 d~Vii-~~GtND~~~~----~~-------~~~~~~~l~~li~~~~~~~~~~ill 114 (191)
T PRK10528 73 RWVLV-ELGGNDGLRG----FP-------PQQTEQTLRQIIQDVKAANAQPLLM 114 (191)
T ss_pred CEEEE-EeccCcCccC----CC-------HHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 57777 8999997532 12 2345667777777777888887766
No 24
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=97.73 E-value=0.0026 Score=58.43 Aligned_cols=227 Identities=16% Similarity=0.093 Sum_probs=112.1
Q ss_pred CCcccEEEEcCCcccccCCCCCcCC-CcCCCCCCCCC-CCCCCCCCccccCCCchhHHHhHhhcCCCCCCcccccc-cCC
Q 021232 20 HLKYHAIFNFGDSLSDTGNFLVSGA-LAFPVIGKLPY-GETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALK-EGQ 96 (315)
Q Consensus 20 ~~~~~~l~vFGDSlsD~Gn~~~~~~-~~~p~~~~~Py-G~~~~~~~~GRfSnG~~~~d~la~~lgl~~~p~yl~~~-~~~ 96 (315)
+..|+-|-.+|||++ .|+...... +.. ...| |..|...-.+.+.+=.+.+.+|-+ ++-.+ .-|.... ...
T Consensus 7 p~DI~viaA~GDSlt-ag~ga~~~~~~~~----~~e~rG~s~~~Gg~~~~~~~~Tlpnil~~-fnp~l-~G~s~~~~~~~ 79 (288)
T cd01824 7 PGDIKVIAALGDSLT-AGNGAGSANNLDL----LTEYRGLSWSIGGDSTLRGLTTLPNILRE-FNPSL-YGYSVGTGDET 79 (288)
T ss_pred cccCeEEeecccccc-ccCCCCCCCcccc----ccccCCceEecCCcccccccccHHHHHHH-hCCCc-ccccCCCCCCC
Confidence 347889999999998 344332111 000 0011 333321112223333555665543 22111 1111100 001
Q ss_pred CCCCCcceeeeeccccccccccccccccccccCCCHHHHHHHHHHHHHHhhcchhhhHhhhcc-CeEEEeeecccccccc
Q 021232 97 NFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKK-SLFFVGEIGGNDYNYR 175 (315)
Q Consensus 97 ~~~~G~NfA~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~g~~~~~~~~~~-sL~~i~~iG~ND~~~~ 175 (315)
.-..+.|.|+.|+++. +|..|++...+..++-. .-+..++ .|++| +||+||+...
T Consensus 80 ~~~~~~N~av~Ga~s~------------------dL~~qa~~lv~r~~~~~-----~i~~~~dwklVtI-~IG~ND~c~~ 135 (288)
T cd01824 80 LPDSGFNVAEPGAKSE------------------DLPQQARLLVRRMKKDP-----RVDFKNDWKLITI-FIGGNDLCSL 135 (288)
T ss_pred CcccceeecccCcchh------------------hHHHHHHHHHHHHhhcc-----ccccccCCcEEEE-EecchhHhhh
Confidence 1224679999998863 46777776544322110 0011112 46888 8999999752
Q ss_pred cccCcchhhhhhhHHHHHHHHHHHHHHHHHhCCcE-EEEcCCCCcccccchhhhhccCCcCCCCCCCc--c--------c
Q 021232 176 AFVGESINQLRASVPLVVKAITNATRLLIEEGAVE-LVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGC--L--------K 244 (315)
Q Consensus 176 ~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~-fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c--~--------~ 244 (315)
.. .... .......+++.+.++.|.+..-|- ++++++|++..++.... .+.. -.......| . +
T Consensus 136 ~~-~~~~----~~~~~~~~nL~~~L~~Lr~~~P~~~V~lv~~~~~~~l~~~~~-~p~~-c~~~~~~~C~c~~~~~~~~~~ 208 (288)
T cd01824 136 CE-DANP----GSPQTFVKNLRKALDILRDEVPRAFVNLVGLLNVASLRSLTK-KPLQ-CETLLAPECPCLLGPTENSYQ 208 (288)
T ss_pred cc-cccC----cCHHHHHHHHHHHHHHHHHhCCCcEEEEEcCCCcHHHHHhcc-CCcc-ccccCCCcCCCcCCCCcchHH
Confidence 21 1100 224556678888888888877553 66667777654443321 0000 000011223 2 3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHHHHh
Q 021232 245 APNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYH 287 (315)
Q Consensus 245 ~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~i~~ 287 (315)
.+.++.+.|++.+++..++-+-+..+..+++ ..++.+.+.
T Consensus 209 ~~~~~~~~y~~~~~eia~~~~~~~~~f~vv~---qPf~~~~~~ 248 (288)
T cd01824 209 DLKKFYKEYQNEVEEIVESGEFDREDFAVVV---QPFFEDTSL 248 (288)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccCccEEe---eCchhcccc
Confidence 5667788888888777665332334555555 445555543
No 25
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.57 E-value=0.0023 Score=54.69 Aligned_cols=91 Identities=10% Similarity=0.087 Sum_probs=47.1
Q ss_pred CeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCC
Q 021232 160 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDR 239 (315)
Q Consensus 160 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~ 239 (315)
.+++| .+|.||....... ..... ..+..+.+...++++ +.++ ++++++++|.....
T Consensus 71 d~V~i-~~G~ND~~~~~~~-~~~~~----~~~~~~~~~~ii~~~-~~~~-~vi~~~~~p~~~~~---------------- 126 (193)
T cd01835 71 NRLVL-SVGLNDTARGGRK-RPQLS----ARAFLFGLNQLLEEA-KRLV-PVLVVGPTPVDEAK---------------- 126 (193)
T ss_pred CEEEE-EecCcccccccCc-ccccC----HHHHHHHHHHHHHHH-hcCC-cEEEEeCCCccccc----------------
Confidence 67788 8999999754210 00111 112222222222222 2344 47777776653210
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHH
Q 021232 240 NGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMR 284 (315)
Q Consensus 240 ~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~ 284 (315)
....++..+.+|+.+++..++ + .+.++|++..+.+
T Consensus 127 ---~~~~~~~~~~~n~~~~~~a~~----~---~~~~vd~~~~~~~ 161 (193)
T cd01835 127 ---MPYSNRRIARLETAFAEVCLR----R---DVPFLDTFTPLLN 161 (193)
T ss_pred ---cchhhHHHHHHHHHHHHHHHH----c---CCCeEeCccchhc
Confidence 012244566777777665543 2 3578899887654
No 26
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=97.14 E-value=0.0024 Score=54.25 Aligned_cols=160 Identities=14% Similarity=0.186 Sum_probs=79.2
Q ss_pred cEEEEcCCcccccCCCCCcCCCcCCCCCCCCCCCCCCCCCccccCCCchhHHHhHhhcCCCCCCcccccccCCCCCCCcc
Q 021232 24 HAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVN 103 (315)
Q Consensus 24 ~~l~vFGDSlsD~Gn~~~~~~~~~p~~~~~PyG~~~~~~~~GRfSnG~~~~d~la~~lgl~~~p~yl~~~~~~~~~~G~N 103 (315)
+.+++.|+|.+-.+... +-|..|+-.+++.+|+++ +|
T Consensus 2 k~~v~YGsSItqG~~As---------------------------rpg~~~~~~~aR~l~~~~----------------iN 38 (178)
T PF14606_consen 2 KRWVAYGSSITQGACAS---------------------------RPGMAYPAILARRLGLDV----------------IN 38 (178)
T ss_dssp -EEEEEE-TT-TTTT-S---------------------------SGGGSHHHHHHHHHT-EE----------------EE
T ss_pred CeEEEECChhhcCCCCC---------------------------CCcccHHHHHHHHcCCCe----------------Ee
Confidence 35778888887655432 126789999999999876 69
Q ss_pred eeeeeccccccccccccccccccccCCCHHHHHHHHHHHHHHhhcchhhhHhhhccCeEEEeeecccccccccccCcchh
Q 021232 104 FAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESIN 183 (315)
Q Consensus 104 fA~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~g~~~~~~~~~~sL~~i~~iG~ND~~~~~~~~~~~~ 183 (315)
.+++|.+-. +..+..+.. . .+.++|++ ..|.| + +..
T Consensus 39 LGfsG~~~l--------------------e~~~a~~ia---~-----------~~a~~~~l-d~~~N-----~----~~~ 74 (178)
T PF14606_consen 39 LGFSGNGKL--------------------EPEVADLIA---E-----------IDADLIVL-DCGPN-----M----SPE 74 (178)
T ss_dssp EE-TCCCS----------------------HHHHHHHH---H-----------S--SEEEE-EESHH-----C----CTT
T ss_pred eeecCcccc--------------------CHHHHHHHh---c-----------CCCCEEEE-EeecC-----C----CHH
Confidence 999997743 223333321 1 24489999 99999 1 112
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhC-CcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHH
Q 021232 184 QLRASVPLVVKAITNATRLLIEEG-AVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELH 262 (315)
Q Consensus 184 ~~~~~v~~~v~~i~~~i~~L~~~G-AR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~ 262 (315)
. +.+.+...|++|-+.= -.-|+++...+ +.. ...........+.+|+.+++.++
T Consensus 75 ~-------~~~~~~~fv~~iR~~hP~tPIllv~~~~--~~~----------------~~~~~~~~~~~~~~~~~~r~~v~ 129 (178)
T PF14606_consen 75 E-------FRERLDGFVKTIREAHPDTPILLVSPIP--YPA----------------GYFDNSRGETVEEFREALREAVE 129 (178)
T ss_dssp T-------HHHHHHHHHHHHHTT-SSS-EEEEE------TT----------------TTS--TTS--HHHHHHHHHHHHH
T ss_pred H-------HHHHHHHHHHHHHHhCCCCCEEEEecCC--ccc----------------cccCchHHHHHHHHHHHHHHHHH
Confidence 2 2233444444544332 34455544221 110 11222334467889999999999
Q ss_pred HHHhhCCCcEEEEEeccHHHHHH------HhCcCCCCCcc
Q 021232 263 KLRQKYPHANIIYADYYGAAMRF------YHAPGHYGQLI 296 (315)
Q Consensus 263 ~L~~~~~g~~i~~~D~~~~~~~i------~~nP~~yGf~~ 296 (315)
+|+++ .+-+++|+|-..++-+- .-||..+||.-
T Consensus 130 ~l~~~-g~~nl~~l~g~~llg~d~e~tvDgvHP~DlG~~~ 168 (178)
T PF14606_consen 130 QLRKE-GDKNLYYLDGEELLGDDHEATVDGVHPNDLGMMR 168 (178)
T ss_dssp HHHHT-T-TTEEEE-HHHCS--------------------
T ss_pred HHHHc-CCCcEEEeCchhhcCccccccccccccccccccc
Confidence 99764 56788888887755222 23577777653
No 27
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=96.81 E-value=0.027 Score=47.12 Aligned_cols=46 Identities=15% Similarity=0.142 Sum_probs=27.7
Q ss_pred CeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCC-cEEEEcC
Q 021232 160 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGA-VELVVPG 215 (315)
Q Consensus 160 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GA-R~fvv~~ 215 (315)
.+++| .+|+||+.... ..+ ......++.+.|+++.+..- .++++..
T Consensus 57 d~vii-~~G~ND~~~~~--~~~-------~~~~~~~~~~li~~i~~~~p~~~i~~~~ 103 (169)
T cd01831 57 DLVVI-NLGTNDFSTGN--NPP-------GEDFTNAYVEFIEELRKRYPDAPIVLML 103 (169)
T ss_pred CEEEE-ECCcCCCCCCC--CCC-------HHHHHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 35777 89999986421 001 33456677777777776653 3455544
No 28
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.69 E-value=0.014 Score=48.03 Aligned_cols=89 Identities=13% Similarity=0.170 Sum_probs=59.5
Q ss_pred CeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCC-cEEEEcCCCCcccccchhhhhccCCcCCCC
Q 021232 160 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGA-VELVVPGNFPIGCSAVYLTLFQSLNEMDYD 238 (315)
Q Consensus 160 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GA-R~fvv~~lpplgc~P~~~~~~~~~~~~~~d 238 (315)
.+++| .+|+||..... + +....+++.+.|+++.+..- -++++.+++|..-.
T Consensus 42 d~vvi-~~G~ND~~~~~----~-------~~~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~---------------- 93 (157)
T cd01833 42 DVVLL-HLGTNDLVLNR----D-------PDTAPDRLRALIDQMRAANPDVKIIVATLIPTTDA---------------- 93 (157)
T ss_pred CEEEE-eccCcccccCC----C-------HHHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCc----------------
Confidence 67777 89999986531 1 23455666677777766532 23555555553211
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHH
Q 021232 239 RNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMR 284 (315)
Q Consensus 239 ~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~ 284 (315)
..+.....||+.+++.+++.+.. +..+.++|++..+.+
T Consensus 94 ------~~~~~~~~~n~~l~~~~~~~~~~--~~~v~~vd~~~~~~~ 131 (157)
T cd01833 94 ------SGNARIAEYNAAIPGVVADLRTA--GSPVVLVDMSTGYTT 131 (157)
T ss_pred ------chhHHHHHHHHHHHHHHHHHhcC--CCCEEEEecCCCCCC
Confidence 11566789999999999887653 667899999988753
No 29
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=96.43 E-value=0.021 Score=47.71 Aligned_cols=89 Identities=17% Similarity=0.169 Sum_probs=57.7
Q ss_pred CeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHh-CCcEEEEcCCCCcccccchhhhhccCCcCCCC
Q 021232 160 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEE-GAVELVVPGNFPIGCSAVYLTLFQSLNEMDYD 238 (315)
Q Consensus 160 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~-GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d 238 (315)
.+++| ++|+||..... + ..+..+++.+.++++.+. ...+++++++||..-.+.
T Consensus 53 d~v~i-~~G~ND~~~~~----~-------~~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~-------------- 106 (174)
T cd01841 53 SKVFL-FLGTNDIGKEV----S-------SNQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDE-------------- 106 (174)
T ss_pred CEEEE-EeccccCCCCC----C-------HHHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCcccc--------------
Confidence 56677 89999986421 2 234556666667777665 456788888887643221
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHH
Q 021232 239 RNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMR 284 (315)
Q Consensus 239 ~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~ 284 (315)
+....++..+.||+.+++..++. .+.++|++..+.+
T Consensus 107 ---~~~~~~~~~~~~n~~l~~~a~~~-------~~~~id~~~~~~~ 142 (174)
T cd01841 107 ---IKTRSNTRIQRLNDAIKELAPEL-------GVTFIDLNDVLVD 142 (174)
T ss_pred ---cccCCHHHHHHHHHHHHHHHHHC-------CCEEEEcHHHHcC
Confidence 11234556788998888765442 2779999998754
No 30
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.40 E-value=0.036 Score=46.11 Aligned_cols=84 Identities=20% Similarity=0.280 Sum_probs=53.3
Q ss_pred CeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHH--hCCcEEEEcCCCCcccccchhhhhccCCcCCC
Q 021232 160 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIE--EGAVELVVPGNFPIGCSAVYLTLFQSLNEMDY 237 (315)
Q Consensus 160 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~--~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~ 237 (315)
.++++ .+|.||..... + .....+++.+.|+++.+ .+ .++++.++||.+ +.
T Consensus 50 d~vvl-~~G~ND~~~~~----~-------~~~~~~~l~~li~~~~~~~~~-~~vi~~~~~p~~--~~------------- 101 (169)
T cd01828 50 KAIFI-MIGINDLAQGT----S-------DEDIVANYRTILEKLRKHFPN-IKIVVQSILPVG--EL------------- 101 (169)
T ss_pred CEEEE-EeeccCCCCCC----C-------HHHHHHHHHHHHHHHHHHCCC-CeEEEEecCCcC--cc-------------
Confidence 67778 89999986321 1 23445566666666666 44 458888888765 10
Q ss_pred CCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHH
Q 021232 238 DRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAM 283 (315)
Q Consensus 238 d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~ 283 (315)
....++.++.+|+.+++..++ . ++.++|++..+.
T Consensus 102 -----~~~~~~~~~~~n~~l~~~a~~-----~--~~~~id~~~~~~ 135 (169)
T cd01828 102 -----KSIPNEQIEELNRQLAQLAQQ-----E--GVTFLDLWAVFT 135 (169)
T ss_pred -----CcCCHHHHHHHHHHHHHHHHH-----C--CCEEEechhhhc
Confidence 112345568899988876552 2 456789987764
No 31
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=96.27 E-value=0.11 Score=45.20 Aligned_cols=112 Identities=9% Similarity=-0.031 Sum_probs=67.2
Q ss_pred cCeEEEeeecccccccccccC-cchhhhhhhHHHHHHHHHHHHHHHHHh-CCcEEEEcCCCCcccccchhhhhccCCcCC
Q 021232 159 KSLFFVGEIGGNDYNYRAFVG-ESINQLRASVPLVVKAITNATRLLIEE-GAVELVVPGNFPIGCSAVYLTLFQSLNEMD 236 (315)
Q Consensus 159 ~sL~~i~~iG~ND~~~~~~~~-~~~~~~~~~v~~~v~~i~~~i~~L~~~-GAR~fvv~~lpplgc~P~~~~~~~~~~~~~ 236 (315)
-++.+| .+|+||-...-... ..... +++-++++.+-++-|-.. --.++++++-||+...-..+..
T Consensus 69 p~lvtV-ffGaNDs~l~~~~~~~~hvP----l~Ey~dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~~-------- 135 (245)
T KOG3035|consen 69 PVLVTV-FFGANDSCLPEPSSLGQHVP----LEEYKDNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQE-------- 135 (245)
T ss_pred ceEEEE-EecCccccCCCCCCCCCccC----HHHHHHHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHHh--------
Confidence 368888 89999976432111 10112 233344444444444443 3456888888888766444332
Q ss_pred CCCCCccc---hhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHHHHhCcCCC
Q 021232 237 YDRNGCLK---APNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHY 292 (315)
Q Consensus 237 ~d~~~c~~---~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~i~~nP~~y 292 (315)
...|.. ..|+.+..|++.+.+..+++ ++..+|.++.+++.-+=++.+
T Consensus 136 --~e~~~~~~~RtNe~~~~Ya~ac~~la~e~-------~l~~vdlws~~Q~~~dw~~~~ 185 (245)
T KOG3035|consen 136 --QEPYVLGPERTNETVGTYAKACANLAQEI-------GLYVVDLWSKMQESDDWQTSC 185 (245)
T ss_pred --ccchhccchhhhhHHHHHHHHHHHHHHHh-------CCeeeeHHhhhhhcccHHHHH
Confidence 123433 48999999999998887765 356788877777654434333
No 32
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=96.24 E-value=0.12 Score=43.13 Aligned_cols=87 Identities=16% Similarity=0.151 Sum_probs=51.7
Q ss_pred CeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCC-cEEEEcCCCCcccccchhhhhccCCcCCCC
Q 021232 160 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGA-VELVVPGNFPIGCSAVYLTLFQSLNEMDYD 238 (315)
Q Consensus 160 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GA-R~fvv~~lpplgc~P~~~~~~~~~~~~~~d 238 (315)
.+++| .+|+||+... .+ .....+++.+.++++.+.+. .+++++.+||. |. .
T Consensus 52 ~~vvi-~~G~ND~~~~----~~-------~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p~---~~--~----------- 103 (171)
T cd04502 52 RRVVL-YAGDNDLASG----RT-------PEEVLRDFRELVNRIRAKLPDTPIAIISIKPS---PA--R----------- 103 (171)
T ss_pred CEEEE-EEecCcccCC----CC-------HHHHHHHHHHHHHHHHHHCCCCcEEEEEecCC---Cc--c-----------
Confidence 57788 8999997532 12 33456677777777777653 34666665542 10 0
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHHH
Q 021232 239 RNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRF 285 (315)
Q Consensus 239 ~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~i 285 (315)
...+...+.+|+.+++..+ +.. .+.++|++..+.+.
T Consensus 104 -----~~~~~~~~~~n~~~~~~a~----~~~--~v~~vD~~~~~~~~ 139 (171)
T cd04502 104 -----WALRPKIRRFNALLKELAE----TRP--NLTYIDVASPMLDA 139 (171)
T ss_pred -----hhhHHHHHHHHHHHHHHHh----cCC--CeEEEECcHHHhCC
Confidence 1122345667777766543 222 46789999877643
No 33
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=96.12 E-value=0.056 Score=44.04 Aligned_cols=95 Identities=15% Similarity=0.055 Sum_probs=60.1
Q ss_pred ccCeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHH-hCCcEEEEcCCCCcccccchhhhhccCCcCC
Q 021232 158 KKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIE-EGAVELVVPGNFPIGCSAVYLTLFQSLNEMD 236 (315)
Q Consensus 158 ~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~-~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~ 236 (315)
+-.++++ .+|+||+.... ..+ .....+.+.+.++++.+ ....++++++.||..+.|.
T Consensus 65 ~~d~vil-~~G~ND~~~~~--~~~-------~~~~~~~~~~~i~~~~~~~~~~~vv~~~~~~~~~~~~------------ 122 (187)
T cd00229 65 KPDLVII-ELGTNDLGRGG--DTS-------IDEFKANLEELLDALRERAPGAKVILITPPPPPPREG------------ 122 (187)
T ss_pred CCCEEEE-Eeccccccccc--ccC-------HHHHHHHHHHHHHHHHHHCCCCcEEEEeCCCCCCCch------------
Confidence 4578888 89999997532 011 22334445555555554 5667788888888776654
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHHH
Q 021232 237 YDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRF 285 (315)
Q Consensus 237 ~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~i 285 (315)
..+.....+|..+++..++.... ..+.++|++..+...
T Consensus 123 --------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~ 160 (187)
T cd00229 123 --------LLGRALPRYNEAIKAVAAENPAP---SGVDLVDLAALLGDE 160 (187)
T ss_pred --------hhHHHHHHHHHHHHHHHHHcCCC---cceEEEEhhhhhCCC
Confidence 12234566787777766655432 457899999887654
No 34
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=95.83 E-value=0.076 Score=45.37 Aligned_cols=94 Identities=14% Similarity=0.042 Sum_probs=54.3
Q ss_pred CeEEEeeecccccccccccCc-chhhhhhhHHHHHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCC
Q 021232 160 SLFFVGEIGGNDYNYRAFVGE-SINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYD 238 (315)
Q Consensus 160 sL~~i~~iG~ND~~~~~~~~~-~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d 238 (315)
++++| .+|+||+......+. ......++.....+++...++++-+.|++ +++++.||+.-
T Consensus 61 d~vii-~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~----------------- 121 (200)
T cd01829 61 DVVVV-FLGANDRQDIRDGDGYLKFGSPEWEEEYRQRIDELLNVARAKGVP-VIWVGLPAMRS----------------- 121 (200)
T ss_pred CEEEE-EecCCCCccccCCCceeecCChhHHHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCC-----------------
Confidence 56677 799999875331111 11111233445556666666666666766 77777777531
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHH
Q 021232 239 RNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMR 284 (315)
Q Consensus 239 ~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~ 284 (315)
...++....+|..+++..++ + + +.++|++..+.+
T Consensus 122 -----~~~~~~~~~~~~~~~~~a~~----~-~--~~~id~~~~~~~ 155 (200)
T cd01829 122 -----PKLSADMVYLNSLYREEVAK----A-G--GEFVDVWDGFVD 155 (200)
T ss_pred -----hhHhHHHHHHHHHHHHHHHH----c-C--CEEEEhhHhhcC
Confidence 01234456677776655443 2 2 679999877643
No 35
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=95.55 E-value=0.14 Score=44.61 Aligned_cols=86 Identities=14% Similarity=0.190 Sum_probs=52.7
Q ss_pred CeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhC-CcEEEEcCCCCcccccchhhhhccCCcCCCC
Q 021232 160 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEG-AVELVVPGNFPIGCSAVYLTLFQSLNEMDYD 238 (315)
Q Consensus 160 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~G-AR~fvv~~lpplgc~P~~~~~~~~~~~~~~d 238 (315)
.+++| ++|+||+.... + .+++.+++.+.|+++.+.. ..++++++++|.+..|
T Consensus 91 d~VvI-~~G~ND~~~~~----~-------~~~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~~~~--------------- 143 (214)
T cd01820 91 KVVVL-LIGTNNIGHTT----T-------AEEIAEGILAIVEEIREKLPNAKILLLGLLPRGQNP--------------- 143 (214)
T ss_pred CEEEE-EecccccCCCC----C-------HHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCCCc---------------
Confidence 56777 89999985421 2 2345566667777776653 3468888887754321
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHH
Q 021232 239 RNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAM 283 (315)
Q Consensus 239 ~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~ 283 (315)
..+.+....+|+.+++.+. + ...+.++|++..+.
T Consensus 144 -----~~~~~~~~~~n~~l~~~~~----~--~~~v~~vd~~~~~~ 177 (214)
T cd01820 144 -----NPLRERNAQVNRLLAVRYD----G--LPNVTFLDIDKGFV 177 (214)
T ss_pred -----hhHHHHHHHHHHHHHHHhc----C--CCCEEEEeCchhhc
Confidence 1223445667777665432 2 22578999998874
No 36
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=94.99 E-value=0.27 Score=46.53 Aligned_cols=75 Identities=19% Similarity=0.102 Sum_probs=46.0
Q ss_pred CCHHHHHHHHHHHHHHhhcchhhhHhhhcc--CeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhC
Q 021232 130 DSLSVQIDWFKKLKSSICSTRKDCETYFKK--SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEG 207 (315)
Q Consensus 130 ~~l~~Qv~~f~~~~~~~~~g~~~~~~~~~~--sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~G 207 (315)
.+|..|-+...+..++... -..++ -|+.| |||+||+-..-. +. ++....++.--++|.++++.|.+.=
T Consensus 160 ~Dlp~QAr~Lv~rik~~~~------i~~~~dWKLi~I-fIG~ND~c~~c~-~~--~~~~~~~~~~~~~i~~Al~~L~~nv 229 (397)
T KOG3670|consen 160 EDLPDQARDLVSRIKKDKE------INMKNDWKLITI-FIGTNDLCAYCE-GP--ETPPSPVDQHKRNIRKALEILRDNV 229 (397)
T ss_pred hhhHHHHHHHHHHHHhccC------cccccceEEEEE-Eeccchhhhhcc-CC--CCCCCchhHHHHHHHHHHHHHHhcC
Confidence 3677787766555443221 00122 48899 999999986432 11 1122334455567899999999887
Q ss_pred CcEEEEc
Q 021232 208 AVELVVP 214 (315)
Q Consensus 208 AR~fvv~ 214 (315)
=|.+|++
T Consensus 230 PR~iV~l 236 (397)
T KOG3670|consen 230 PRTIVSL 236 (397)
T ss_pred CceEEEE
Confidence 7887655
No 37
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=94.50 E-value=0.47 Score=41.03 Aligned_cols=14 Identities=36% Similarity=0.722 Sum_probs=11.6
Q ss_pred cCeEEEeeecccccc
Q 021232 159 KSLFFVGEIGGNDYN 173 (315)
Q Consensus 159 ~sL~~i~~iG~ND~~ 173 (315)
.++++| .+|+||..
T Consensus 78 ~d~v~i-~lG~ND~~ 91 (216)
T COG2755 78 PDLVII-MLGGNDIG 91 (216)
T ss_pred CCEEEE-Eeeccccc
Confidence 467777 89999996
No 38
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=93.01 E-value=1 Score=41.46 Aligned_cols=55 Identities=13% Similarity=0.079 Sum_probs=37.2
Q ss_pred CeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCCc--EEEEcCCCCc
Q 021232 160 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAV--ELVVPGNFPI 219 (315)
Q Consensus 160 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR--~fvv~~lppl 219 (315)
.+++| ++|+||.....- ... . ...+.+--+++.+.++.|.+..-+ +++++++|++
T Consensus 124 ~lVtI-~lGgND~C~g~~-d~~--~-~tp~eefr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~ 180 (305)
T cd01826 124 ALVIY-SMIGNDVCNGPN-DTI--N-HTTPEEFYENVMEALKYLDTKLPNGSHVILVGLVDG 180 (305)
T ss_pred eEEEE-EeccchhhcCCC-ccc--c-CcCHHHHHHHHHHHHHHHHhcCCCCCEEEEEeccch
Confidence 67888 899999976421 100 0 122445566788888888888755 8899999884
No 39
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=90.02 E-value=1.4 Score=36.02 Aligned_cols=27 Identities=30% Similarity=0.400 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHH
Q 021232 251 RYHNTMLKAELHKLRQKYPHANIIYADYYGAAM 283 (315)
Q Consensus 251 ~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~ 283 (315)
+.+|+.+ +++.+++++ +.++|++..+.
T Consensus 95 ~~~n~~~----~~~a~~~~~--v~~id~~~~~~ 121 (150)
T cd01840 95 PDVNAYL----LDAAKKYKN--VTIIDWYKAAK 121 (150)
T ss_pred HHHHHHH----HHHHHHCCC--cEEecHHHHhc
Confidence 3456555 555666665 56788876654
No 40
>PF08194 DIM: DIM protein; InterPro: IPR013172 Drosophila immune-induced molecules (DIMs) are short proteins induced during the immune response of Drosophila []. This entry includes DIMs 1 to 4 and DIM23.
Probab=84.49 E-value=1.6 Score=26.77 Aligned_cols=31 Identities=29% Similarity=0.312 Sum_probs=20.5
Q ss_pred CchhHHHHHHHHHHhhcCCCCcccEEEEcCC
Q 021232 1 MKFFHLVFALCLLRSVSTSHLKYHAIFNFGD 31 (315)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~l~vFGD 31 (315)
||.+.+.|++.++....+.+....++++=||
T Consensus 1 Mk~l~~a~~l~lLal~~a~~~~pG~ViING~ 31 (36)
T PF08194_consen 1 MKCLSLAFALLLLALAAAVPATPGNVIINGK 31 (36)
T ss_pred CceeHHHHHHHHHHHHhcccCCCCeEEECce
Confidence 8999886665555554454445667777775
No 41
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=81.95 E-value=4.8 Score=37.17 Aligned_cols=65 Identities=15% Similarity=0.166 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEcCCCCcc-cccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCC
Q 021232 192 VVKAITNATRLLIEEGAVELVVPGNFPIG-CSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPH 270 (315)
Q Consensus 192 ~v~~i~~~i~~L~~~GAR~fvv~~lpplg-c~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g 270 (315)
-++.+.+.++++.++|.|.|+++++|+-. .-+. ...+..+. |..+++.++.+++++|+
T Consensus 49 s~d~l~~~~~~~~~~Gi~~v~LFgv~~~~~Kd~~----------------~gs~a~~~-----~g~v~~air~iK~~~pd 107 (320)
T cd04824 49 GVNRLEEFLRPLVAKGLRSVILFGVPLKPGKDDR----------------SGSAADDE-----DGPVIQAIKLIREEFPE 107 (320)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCccccCCcC----------------ccccccCC-----CChHHHHHHHHHHhCCC
Confidence 36678888999999999999999996421 2221 01111111 55677888889999998
Q ss_pred cEEEEEec
Q 021232 271 ANIIYADY 278 (315)
Q Consensus 271 ~~i~~~D~ 278 (315)
.- ++.|+
T Consensus 108 l~-vi~Dv 114 (320)
T cd04824 108 LL-IACDV 114 (320)
T ss_pred cE-EEEee
Confidence 64 45565
No 42
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=80.60 E-value=2.3 Score=40.10 Aligned_cols=112 Identities=15% Similarity=0.086 Sum_probs=66.9
Q ss_pred hccCeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCC
Q 021232 157 FKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMD 236 (315)
Q Consensus 157 ~~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~ 236 (315)
..+.+++. |+|+||+...-...... .....+......+.+++..++.++..+||..+.|.++..|..+.-.... ..+
T Consensus 97 ~~~~~~~~-~a~gnd~A~gga~~~~~-~~~~~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~~~~gg-and 173 (370)
T COG3240 97 DPNGLYIH-WAGGNDLAVGGARSTEP-NTGNSIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALYFLWGG-AND 173 (370)
T ss_pred CcccccCc-ccccccHhhhccccccc-cccccccccccchHHHHHHHHHhcCCccccccccccccCHHHHHHHhhc-chh
Confidence 45678988 99999998643211111 1112233455677888899999999999999999999999987532111 111
Q ss_pred CCCCCccchhhHHHHHHHH----HHHHHHHHHHhhCCCcEEEE
Q 021232 237 YDRNGCLKAPNAFARYHNT----MLKAELHKLRQKYPHANIIY 275 (315)
Q Consensus 237 ~d~~~c~~~~n~~~~~fN~----~L~~~l~~L~~~~~g~~i~~ 275 (315)
+-... ..--...+.++. .+...|+.|.+ .|++.++
T Consensus 174 ~~~~~--~~~a~~~q~~~~~~~~~~~~~Vq~L~~--AGA~~i~ 212 (370)
T COG3240 174 YLALP--MLKAAAYQQLEGSTKADQSSAVQRLIA--AGARNIL 212 (370)
T ss_pred hhccc--ccchhhhHHHhcchhhHHHHHHHHHHH--hhccEEE
Confidence 10111 111122333444 46666777765 4666553
No 43
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=79.53 E-value=13 Score=32.81 Aligned_cols=85 Identities=18% Similarity=0.222 Sum_probs=50.8
Q ss_pred EEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCc
Q 021232 163 FVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGC 242 (315)
Q Consensus 163 ~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c 242 (315)
.+ +.|.+.....+....+. . .+.+.+-+.+.++.|...|.|+|+|+|=- ++
T Consensus 61 ~i-~yG~s~~h~~fpGTisl-~----~~t~~~~l~di~~sl~~~Gf~~ivivngH----------------------gG- 111 (237)
T PF02633_consen 61 PI-PYGCSPHHMGFPGTISL-S----PETLIALLRDILRSLARHGFRRIVIVNGH----------------------GG- 111 (237)
T ss_dssp -B---BB-GCCTTSTT-BBB------HHHHHHHHHHHHHHHHHHT--EEEEEESS----------------------TT-
T ss_pred CC-ccccCcccCCCCCeEEe-C----HHHHHHHHHHHHHHHHHcCCCEEEEEECC----------------------Hh-
Confidence 46 78888876654322221 1 12344456667788999999999998721 01
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHHHH
Q 021232 243 LKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFY 286 (315)
Q Consensus 243 ~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~i~ 286 (315)
....|...+++|+.++++..+..+|.+.+..+..
T Consensus 112 ----------N~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~~~ 145 (237)
T PF02633_consen 112 ----------NIAALEAAARELRQEYPGVKVFVINWWQLAEDEG 145 (237)
T ss_dssp ----------HHHHHHHHHHHHHHHGCC-EEEEEEGGGCSHCHH
T ss_pred ----------HHHHHHHHHHHHHhhCCCcEEEEeechhccchhh
Confidence 1225677778888888999999999998866543
No 44
>PLN02757 sirohydrochlorine ferrochelatase
Probab=76.12 E-value=8.3 Score=31.95 Aligned_cols=63 Identities=17% Similarity=0.195 Sum_probs=42.8
Q ss_pred HHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 021232 196 ITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIY 275 (315)
Q Consensus 196 i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~ 275 (315)
+.+.|++|.+.|+|+|+| +|.++... .....-+.+.++++++++|+.+|.+
T Consensus 60 l~eal~~l~~~g~~~vvV--------vP~FL~~G---------------------~H~~~DIp~~v~~~~~~~p~~~i~~ 110 (154)
T PLN02757 60 IKDAFGRCVEQGASRVIV--------SPFFLSPG---------------------RHWQEDIPALTAEAAKEHPGVKYLV 110 (154)
T ss_pred HHHHHHHHHHCCCCEEEE--------EEhhhcCC---------------------cchHhHHHHHHHHHHHHCCCcEEEE
Confidence 455667888899999999 47776421 1113446778888999999999987
Q ss_pred Ee---ccHHHHHHHh
Q 021232 276 AD---YYGAAMRFYH 287 (315)
Q Consensus 276 ~D---~~~~~~~i~~ 287 (315)
.. .+..+-+++.
T Consensus 111 ~~pLG~~p~l~~ll~ 125 (154)
T PLN02757 111 TAPIGLHELMVDVVN 125 (154)
T ss_pred CCCCCCCHHHHHHHH
Confidence 64 3345555443
No 45
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=75.56 E-value=11 Score=34.88 Aligned_cols=63 Identities=11% Similarity=0.208 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCc
Q 021232 192 VVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHA 271 (315)
Q Consensus 192 ~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~ 271 (315)
-++.+.+.++++.++|.+.|+++++|.. .-+. ..+..+. |..+++.+..+++++|+.
T Consensus 49 s~d~l~~~~~~~~~~Gi~~v~LFgv~~~-Kd~~-----------------gs~A~~~-----~g~v~~air~iK~~~p~l 105 (314)
T cd00384 49 SVDSLVEEAEELADLGIRAVILFGIPEH-KDEI-----------------GSEAYDP-----DGIVQRAIRAIKEAVPEL 105 (314)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCC-CCCC-----------------cccccCC-----CChHHHHHHHHHHhCCCc
Confidence 4677888899999999999999999642 1111 1111222 456778888999999987
Q ss_pred EEEEEec
Q 021232 272 NIIYADY 278 (315)
Q Consensus 272 ~i~~~D~ 278 (315)
- +..|+
T Consensus 106 ~-vi~Dv 111 (314)
T cd00384 106 V-VITDV 111 (314)
T ss_pred E-EEEee
Confidence 4 45565
No 46
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=74.48 E-value=11 Score=34.83 Aligned_cols=63 Identities=14% Similarity=0.087 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCc
Q 021232 192 VVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHA 271 (315)
Q Consensus 192 ~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~ 271 (315)
-++.+.+.++++.++|.+.|+++++|+. .-+. ..+..+. |..+++.+..+++++|+.
T Consensus 59 sid~l~~~~~~~~~~Gi~~v~lFgv~~~-Kd~~-----------------gs~A~~~-----~g~v~~air~iK~~~pdl 115 (322)
T PRK13384 59 PESALADEIERLYALGIRYVMPFGISHH-KDAK-----------------GSDTWDD-----NGLLARMVRTIKAAVPEM 115 (322)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCC-CCCC-----------------cccccCC-----CChHHHHHHHHHHHCCCe
Confidence 3667888899999999999999999642 2111 1112222 566788889999999997
Q ss_pred EEEEEec
Q 021232 272 NIIYADY 278 (315)
Q Consensus 272 ~i~~~D~ 278 (315)
- ++.|+
T Consensus 116 ~-vi~DV 121 (322)
T PRK13384 116 M-VIPDI 121 (322)
T ss_pred E-EEeee
Confidence 5 45565
No 47
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=72.79 E-value=12 Score=34.57 Aligned_cols=64 Identities=13% Similarity=0.178 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEcCCCC-cccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCC
Q 021232 192 VVKAITNATRLLIEEGAVELVVPGNFP-IGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPH 270 (315)
Q Consensus 192 ~v~~i~~~i~~L~~~GAR~fvv~~lpp-lgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g 270 (315)
-++.+.+.++++.++|.+.|++++++| -..-+. ..+..+. |.-+++.+..+++++|+
T Consensus 52 s~d~l~~~v~~~~~~Gi~~v~lFgv~~~~~KD~~-----------------gs~A~~~-----~g~v~~air~iK~~~p~ 109 (320)
T cd04823 52 SIDELLKEAEEAVDLGIPAVALFPVTPPELKSED-----------------GSEAYNP-----DNLVCRAIRAIKEAFPE 109 (320)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCcccCCcc-----------------cccccCC-----CChHHHHHHHHHHhCCC
Confidence 467888889999999999999999843 112111 1111222 55677888899999998
Q ss_pred cEEEEEec
Q 021232 271 ANIIYADY 278 (315)
Q Consensus 271 ~~i~~~D~ 278 (315)
.- ++.|+
T Consensus 110 l~-vi~DV 116 (320)
T cd04823 110 LG-IITDV 116 (320)
T ss_pred cE-EEEee
Confidence 74 45565
No 48
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=72.73 E-value=13 Score=34.55 Aligned_cols=63 Identities=11% Similarity=0.230 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCc
Q 021232 192 VVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHA 271 (315)
Q Consensus 192 ~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~ 271 (315)
-++.+.+.++++.++|.+.|+++++|.. .-+. ..+..+. |..+.+.++.+++++|+.
T Consensus 57 s~d~l~~~v~~~~~~Gi~av~LFgv~~~-Kd~~-----------------gs~A~~~-----~g~v~rair~iK~~~p~l 113 (323)
T PRK09283 57 SIDLLVKEAEEAVELGIPAVALFGVPEL-KDED-----------------GSEAYNP-----DGLVQRAIRAIKKAFPEL 113 (323)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCcCCC-CCcc-----------------cccccCC-----CCHHHHHHHHHHHhCCCc
Confidence 4667888899999999999999998422 1111 1122222 556788889999999987
Q ss_pred EEEEEec
Q 021232 272 NIIYADY 278 (315)
Q Consensus 272 ~i~~~D~ 278 (315)
- +..|+
T Consensus 114 ~-vi~DV 119 (323)
T PRK09283 114 G-VITDV 119 (323)
T ss_pred E-EEEee
Confidence 4 45565
No 49
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=70.85 E-value=14 Score=34.37 Aligned_cols=64 Identities=9% Similarity=0.255 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcE
Q 021232 193 VKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHAN 272 (315)
Q Consensus 193 v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~ 272 (315)
++.+.+.++++.++|.+.|+++++.+ |..+.. ...+..+. |.-+.+.+..+++.+|+.
T Consensus 56 id~l~~~v~~~~~~GI~~v~lFgvi~----~~~Kd~------------~gs~a~~~-----~g~v~~air~iK~~~pdl- 113 (324)
T PF00490_consen 56 IDSLVKEVEEAVDLGIRAVILFGVID----PSKKDE------------EGSEAYNP-----DGLVQRAIRAIKKAFPDL- 113 (324)
T ss_dssp HHHHHHHHHHHHHTT--EEEEEEE-S----CSC-BS------------S-GGGGST-----TSHHHHHHHHHHHHSTTS-
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeeCC----cccCCc------------chhcccCC-----CChHHHHHHHHHHhCCCc-
Confidence 56788889999999999999998732 211111 11122222 566788889999999996
Q ss_pred EEEEec
Q 021232 273 IIYADY 278 (315)
Q Consensus 273 i~~~D~ 278 (315)
++..|+
T Consensus 114 ~vi~Dv 119 (324)
T PF00490_consen 114 LVITDV 119 (324)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 456676
No 50
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=65.31 E-value=13 Score=27.85 Aligned_cols=53 Identities=26% Similarity=0.311 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 021232 196 ITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIY 275 (315)
Q Consensus 196 i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~ 275 (315)
+.+.+++|.+.|+++++|+ |.++... ......+...+++++.++|+.++.+
T Consensus 46 ~~~~l~~l~~~g~~~v~vv--------Plfl~~G---------------------~h~~~dip~~~~~~~~~~~~~~i~~ 96 (101)
T cd03416 46 LAEALDELAAQGATRIVVV--------PLFLLAG---------------------GHVKEDIPAALAAARARHPGVRIRY 96 (101)
T ss_pred HHHHHHHHHHcCCCEEEEE--------eeEeCCC---------------------ccccccHHHHHHHHHHHCCCeEEEe
Confidence 3445778888999999884 6665421 1112345666777777889998887
Q ss_pred Ee
Q 021232 276 AD 277 (315)
Q Consensus 276 ~D 277 (315)
.+
T Consensus 97 ~~ 98 (101)
T cd03416 97 AP 98 (101)
T ss_pred cC
Confidence 64
No 51
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=55.93 E-value=6.7 Score=29.71 Aligned_cols=52 Identities=21% Similarity=0.202 Sum_probs=34.9
Q ss_pred HHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEe
Q 021232 198 NATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYAD 277 (315)
Q Consensus 198 ~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D 277 (315)
+.+++|.+.|+++|+|+ |.++... ..-..-+.+.+++++.++|+.++.+..
T Consensus 41 ~~l~~l~~~g~~~ivvv--------P~fL~~G---------------------~h~~~DIp~~l~~~~~~~~~~~v~~~~ 91 (105)
T PF01903_consen 41 EALERLVAQGARRIVVV--------PYFLFPG---------------------YHVKRDIPEALAEARERHPGIEVRVAP 91 (105)
T ss_dssp HCCHHHHCCTCSEEEEE--------EESSSSS---------------------HHHHCHHHHHHCHHHHCSTTEEEEE--
T ss_pred HHHHHHHHcCCCeEEEE--------eeeecCc---------------------cchHhHHHHHHHHHHhhCCceEEEECC
Confidence 34578888999999885 6665321 111223677888999999999998865
Q ss_pred c
Q 021232 278 Y 278 (315)
Q Consensus 278 ~ 278 (315)
.
T Consensus 92 p 92 (105)
T PF01903_consen 92 P 92 (105)
T ss_dssp -
T ss_pred C
Confidence 4
No 52
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=53.34 E-value=51 Score=30.47 Aligned_cols=66 Identities=11% Similarity=0.248 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCC
Q 021232 191 LVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPH 270 (315)
Q Consensus 191 ~~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g 270 (315)
-.++.+.+.++++.++|.|-|+++++|+-. .+...+ ...++ -|..+++.+..+++.+|+
T Consensus 58 ~s~d~l~~~~~~~~~lGi~av~LFgvp~~~----~Kd~~g---s~A~~--------------~~givqravr~ik~~~p~ 116 (330)
T COG0113 58 YSLDRLVEEAEELVDLGIPAVILFGVPDDS----KKDETG---SEAYD--------------PDGIVQRAVRAIKEAFPE 116 (330)
T ss_pred ccHHHHHHHHHHHHhcCCCEEEEeCCCccc----ccCccc---ccccC--------------CCChHHHHHHHHHHhCCC
Confidence 347788888999999999999999998631 111111 01111 145677888899999996
Q ss_pred cEEEEEec
Q 021232 271 ANIIYADY 278 (315)
Q Consensus 271 ~~i~~~D~ 278 (315)
. ++..|+
T Consensus 117 l-~iitDv 123 (330)
T COG0113 117 L-VVITDV 123 (330)
T ss_pred e-EEEeee
Confidence 5 455665
No 53
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=50.08 E-value=54 Score=25.18 Aligned_cols=51 Identities=20% Similarity=0.176 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 021232 196 ITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIY 275 (315)
Q Consensus 196 i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~ 275 (315)
+.+.+++|.+.|+++++|+ |.++... . |-+.+...+++++.+ |+.++.+
T Consensus 47 ~~~~l~~l~~~g~~~i~vv--------P~fL~~G---------------------~-h~~~i~~~~~~~~~~-~~~~i~~ 95 (117)
T cd03414 47 LPEALERLRALGARRVVVL--------PYLLFTG---------------------V-LMDRIEEQVAELAAE-PGIEFVL 95 (117)
T ss_pred HHHHHHHHHHcCCCEEEEE--------echhcCC---------------------c-hHHHHHHHHHHHHhC-CCceEEE
Confidence 4566778888999999885 6555320 1 112356677778777 8888876
Q ss_pred Ee
Q 021232 276 AD 277 (315)
Q Consensus 276 ~D 277 (315)
..
T Consensus 96 ~~ 97 (117)
T cd03414 96 AP 97 (117)
T ss_pred CC
Confidence 54
No 54
>KOG2794 consensus Delta-aminolevulinic acid dehydratase [Coenzyme transport and metabolism]
Probab=46.60 E-value=33 Score=31.12 Aligned_cols=93 Identities=17% Similarity=0.255 Sum_probs=54.6
Q ss_pred ccCeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCC
Q 021232 158 KKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDY 237 (315)
Q Consensus 158 ~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~ 237 (315)
++=+|=+ +|--||--..- +.+......--++.+++.+..|.+.|.|.+++++++| |......++
T Consensus 39 ~nliyPl-FI~e~~dd~~p-----I~SmPg~~r~G~~rL~e~l~plv~~Gl~sViLfgvv~----~~~Kd~~gs------ 102 (340)
T KOG2794|consen 39 ANLIYPL-FIHEGEDDFTP-----IDSMPGIYRLGVNRLKEELAPLVAKGLRSVILFGVVP----EALKDPTGS------ 102 (340)
T ss_pred hheeeeE-EEecCcccccc-----cccCCchhHHHHHHHHHHHHHHHHhccceEEEecCCC----ccccCcccc------
Confidence 4456666 66666543211 1111112223467788999999999999999999874 211111000
Q ss_pred CCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEec
Q 021232 238 DRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADY 278 (315)
Q Consensus 238 d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~ 278 (315)
+. ..=|.-.-..+..|+..+|+.- ++.|+
T Consensus 103 ------~A-----ds~~gpvi~ai~~lr~~fPdL~-i~cDV 131 (340)
T KOG2794|consen 103 ------EA-----DSDNGPVIRAIRLLRDRFPDLV-IACDV 131 (340)
T ss_pred ------cc-----cCCCCcHHHHHHHHHHhCcceE-EEeee
Confidence 00 1114455677888999999984 46665
No 55
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=45.70 E-value=1.1e+02 Score=28.55 Aligned_cols=81 Identities=20% Similarity=0.173 Sum_probs=48.0
Q ss_pred CeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCC---cEEEEcCCCCcccccchhhhhccCCcCC
Q 021232 160 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGA---VELVVPGNFPIGCSAVYLTLFQSLNEMD 236 (315)
Q Consensus 160 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GA---R~fvv~~lpplgc~P~~~~~~~~~~~~~ 236 (315)
+..+| .+|.||.-.....+ ...... .+.=.+.+++-+.++.+.-. -+++.+++|+.-
T Consensus 179 a~vVV-~lGaND~q~~~~gd-~~~kf~--S~~W~~eY~kRvd~~l~ia~~~~~~V~WvGmP~~r---------------- 238 (354)
T COG2845 179 AAVVV-MLGANDRQDFKVGD-VYEKFR--SDEWTKEYEKRVDAILKIAHTHKVPVLWVGMPPFR---------------- 238 (354)
T ss_pred cEEEE-EecCCCHHhcccCC-eeeecC--chHHHHHHHHHHHHHHHHhcccCCcEEEeeCCCcc----------------
Confidence 34455 69999987654221 111100 11234455555666655433 347888887642
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHHHHHHh
Q 021232 237 YDRNGCLKAPNAFARYHNTMLKAELHKLRQ 266 (315)
Q Consensus 237 ~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~ 266 (315)
.+.+|+-...+|....+.++++.-
T Consensus 239 ------~~~l~~dm~~ln~iy~~~vE~~~g 262 (354)
T COG2845 239 ------KKKLNADMVYLNKIYSKAVEKLGG 262 (354)
T ss_pred ------ccccchHHHHHHHHHHHHHHHhCC
Confidence 235667778999999999888743
No 56
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=43.36 E-value=15 Score=18.86 Aligned_cols=15 Identities=27% Similarity=0.412 Sum_probs=10.1
Q ss_pred CchhHHHHHHHHHHh
Q 021232 1 MKFFHLVFALCLLRS 15 (315)
Q Consensus 1 ~~~~~~~~~~~~~~~ 15 (315)
||+..+|+.|++++.
T Consensus 2 Mk~vIIlvvLLliSf 16 (19)
T PF13956_consen 2 MKLVIILVVLLLISF 16 (19)
T ss_pred ceehHHHHHHHhccc
Confidence 777777766666544
No 57
>COG0646 MetH Methionine synthase I (cobalamin-dependent), methyltransferase domain [Amino acid transport and metabolism]
Probab=43.15 E-value=1.2e+02 Score=28.07 Aligned_cols=113 Identities=17% Similarity=0.188 Sum_probs=67.1
Q ss_pred cceeeeeccccccccccccccccccccCCCHHHHHHHHHHHHHHhhcchhhhHhh-hccCeEEEeeecccccccccccCc
Q 021232 102 VNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETY-FKKSLFFVGEIGGNDYNYRAFVGE 180 (315)
Q Consensus 102 ~NfA~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~g~~~~~~~-~~~sL~~i~~iG~ND~~~~~~~~~ 180 (315)
.+|--+||-+...+.|..+.+ ......+++++.....-..++.. +.+... ..+-.|+.|.+|.--=......
T Consensus 60 ~aY~eAGADiIeTNTFgat~i---~lady~led~v~~in~~aa~iAR--~aA~~~~~~k~rfVaGsiGPt~k~~~~~~-- 132 (311)
T COG0646 60 RAYIEAGADIIETNTFGATTI---KLADYGLEDKVYEINQKAARIAR--RAADEAGDPKPRFVAGSIGPTNKTLSISP-- 132 (311)
T ss_pred HHHHhccCcEEEecCCCcchh---hHhhhChHHHHHHHHHHHHHHHH--HHHhhcCCCCceEEEEeccCcCCcCCcCC--
Confidence 478888998876665543322 22345777777665433223321 111111 1146677777765332111111
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHhCCcEEEEcCCCCcccccc
Q 021232 181 SINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAV 224 (315)
Q Consensus 181 ~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~ 224 (315)
. .....+++++.+..+++-|++-|+.=|+|=++-++-++-+
T Consensus 133 --~-~~v~fd~l~~ay~eq~~~Li~gG~D~iLiET~~D~l~~Ka 173 (311)
T COG0646 133 --D-FAVTFDELVEAYREQVEGLIDGGADLILIETIFDTLNAKA 173 (311)
T ss_pred --c-ccccHHHHHHHHHHHHHHHHhCCCcEEEEehhccHHHHHH
Confidence 0 0122678999999999999999999999999888766433
No 58
>COG3581 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=43.12 E-value=39 Score=32.32 Aligned_cols=47 Identities=32% Similarity=0.502 Sum_probs=31.1
Q ss_pred HHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecc
Q 021232 202 LLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYY 279 (315)
Q Consensus 202 ~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~ 279 (315)
.+.+.|+.+++- +-|.||.|.-... +-++.+|++++|++++.-+|.-
T Consensus 327 e~i~~g~~nvIc--lqPFGCmPnhI~~-----------------------------kgm~k~lk~~~p~ani~aVd~d 373 (420)
T COG3581 327 ELIESGVDNVIC--LQPFGCMPNHIVS-----------------------------KGMIKGLKRDKPKANIAAVDYD 373 (420)
T ss_pred HHHHcCCCceEE--ecCccCCcHHHHH-----------------------------HHHHHHHHhcCCCCceEEeecC
Confidence 355667777765 6699999943221 4456667777777777777654
No 59
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=42.43 E-value=19 Score=26.05 Aligned_cols=21 Identities=19% Similarity=0.185 Sum_probs=15.6
Q ss_pred HHHHHHHHHHhCCcEEEEcCC
Q 021232 196 ITNATRLLIEEGAVELVVPGN 216 (315)
Q Consensus 196 i~~~i~~L~~~GAR~fvv~~l 216 (315)
+.+.+.+|.++||+.|+|..+
T Consensus 52 ~~~~~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 52 VWDLMDKLKAAGASDILVLPI 72 (75)
T ss_dssp HHHHHHHHHCTT-EEEEEEE-
T ss_pred HHHHHHHHHHcCCCEEEEEec
Confidence 455678899999999999754
No 60
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=41.06 E-value=33 Score=26.18 Aligned_cols=23 Identities=22% Similarity=0.241 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHhCCcEEEEcCC
Q 021232 194 KAITNATRLLIEEGAVELVVPGN 216 (315)
Q Consensus 194 ~~i~~~i~~L~~~GAR~fvv~~l 216 (315)
+.+.+.+.+|.++||+.|+|..+
T Consensus 74 ~~v~~~~~~Lk~~GA~~Ilv~~i 96 (100)
T TIGR03455 74 KVVNELIDKLKAAGARDILVLPI 96 (100)
T ss_pred HHHHHHHHHHHHcCCCeEEEech
Confidence 45777889999999999999754
No 61
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=39.13 E-value=1e+02 Score=26.11 Aligned_cols=27 Identities=30% Similarity=0.435 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEcC
Q 021232 189 VPLVVKAITNATRLLIEEGAVELVVPG 215 (315)
Q Consensus 189 v~~~v~~i~~~i~~L~~~GAR~fvv~~ 215 (315)
+..+-..+.+.|.+|++.|.+.|+.-+
T Consensus 24 ~~~ik~~L~~~i~~lie~G~~~fi~Gg 50 (177)
T PF06908_consen 24 IQVIKKALKKQIIELIEEGVRWFITGG 50 (177)
T ss_dssp HHHHHHHHHHHHHHHHTTT--EEEE--
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 556778899999999999999998854
No 62
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=37.94 E-value=95 Score=27.93 Aligned_cols=86 Identities=17% Similarity=0.235 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhC
Q 021232 189 VPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKY 268 (315)
Q Consensus 189 v~~~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~ 268 (315)
++++++.+.+.++.|....-+-=+|+++.|+ |..++-.. .| .-..|..++ +.|+..+.+|..++
T Consensus 147 ~~ei~~~l~~~~~~l~~~nP~~kiilTVSPV---rl~~T~~~------~d----~~~an~~SK---s~Lr~a~~~l~~~~ 210 (251)
T PF08885_consen 147 VEEILEDLEAIIDLLRSINPDIKIILTVSPV---RLIATFRD------RD----GLVANQYSK---STLRAAAHELVRAF 210 (251)
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEEEEeccc---hhhccccc------cc----chhhhhhhH---HHHHHHHHHHHhcC
Confidence 6778888888888888776655567788885 44443110 01 122334333 35777788888765
Q ss_pred CCcEEEEEeccHHHHHHHhCcCCC
Q 021232 269 PHANIIYADYYGAAMRFYHAPGHY 292 (315)
Q Consensus 269 ~g~~i~~~D~~~~~~~i~~nP~~y 292 (315)
+ ++.||-.|.++++-+.++.-|
T Consensus 211 ~--~v~YFPSYEiv~d~lrdyrfy 232 (251)
T PF08885_consen 211 D--DVDYFPSYEIVMDELRDYRFY 232 (251)
T ss_pred C--CceEcchHhhccCcccccccc
Confidence 4 568999999999887776555
No 63
>KOG4079 consensus Putative mitochondrial ribosomal protein mRpS25 [Translation, ribosomal structure and biogenesis]
Probab=35.18 E-value=17 Score=29.42 Aligned_cols=16 Identities=25% Similarity=0.183 Sum_probs=13.6
Q ss_pred HhCCcEEEEcCCCCcc
Q 021232 205 EEGAVELVVPGNFPIG 220 (315)
Q Consensus 205 ~~GAR~fvv~~lpplg 220 (315)
..|||+||++|+|.+-
T Consensus 42 ~~GARdFVfwNipQiQ 57 (169)
T KOG4079|consen 42 QSGARDFVFWNIPQIQ 57 (169)
T ss_pred ccCccceEEecchhhc
Confidence 4699999999998764
No 64
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=34.38 E-value=1.1e+02 Score=26.47 Aligned_cols=51 Identities=18% Similarity=0.208 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEE
Q 021232 194 KAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANI 273 (315)
Q Consensus 194 ~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i 273 (315)
.++...++.|.+.|++++.+..+ +. . ...++++.+++|+++|
T Consensus 136 ~Tl~~ai~~L~~~G~~~I~v~~l--l~---------~---------------------------~~gl~~l~~~~p~v~i 177 (207)
T TIGR01091 136 GTMIAALDLLKKRGAKKIKVLSI--VA---------A---------------------------PEGIEAVEKAHPDVDI 177 (207)
T ss_pred HHHHHHHHHHHHcCCCEEEEEEE--ec---------C---------------------------HHHHHHHHHHCCCCEE
Confidence 36778889999999999888765 10 0 3445667778999999
Q ss_pred EEEeccHHH
Q 021232 274 IYADYYGAA 282 (315)
Q Consensus 274 ~~~D~~~~~ 282 (315)
+..-+..-+
T Consensus 178 ~~~~id~~l 186 (207)
T TIGR01091 178 YTAAIDEKL 186 (207)
T ss_pred EEEEECCCc
Confidence 887554433
No 65
>PRK13660 hypothetical protein; Provisional
Probab=33.51 E-value=2.7e+02 Score=23.73 Aligned_cols=27 Identities=30% Similarity=0.455 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEcC
Q 021232 189 VPLVVKAITNATRLLIEEGAVELVVPG 215 (315)
Q Consensus 189 v~~~v~~i~~~i~~L~~~GAR~fvv~~ 215 (315)
+..+-..+.+.|.++++.|.+.|++-+
T Consensus 24 ~~~IK~aL~~~l~~~~e~G~~wfi~gg 50 (182)
T PRK13660 24 IKYIKKAIKRKLIALLEEGLEWVIISG 50 (182)
T ss_pred hHHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 445667888999999999999998865
No 66
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=33.50 E-value=1.1e+02 Score=22.01 Aligned_cols=66 Identities=17% Similarity=0.045 Sum_probs=34.8
Q ss_pred hCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHH---HHHHHHHHHHHHhhCCCcEE-EEEec
Q 021232 206 EGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYH---NTMLKAELHKLRQKYPHANI-IYADY 278 (315)
Q Consensus 206 ~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~f---N~~L~~~l~~L~~~~~g~~i-~~~D~ 278 (315)
-|||.+|++.++=..-.|..... .....+.......--.+| -++|++..+.|+++.|+.+. +++|+
T Consensus 9 p~arSvIv~a~~Y~~~~~~~~~~-------~~~~~g~iarYA~G~DYH~vlk~~L~~l~~~i~~~~~~~~~r~~VDT 78 (78)
T PF08331_consen 9 PGARSVIVLAFPYYPEPPPPPPP-------PGPGRGRIARYAWGRDYHKVLKKKLEQLAEWIRELGPDFEYRIFVDT 78 (78)
T ss_pred CCCcEEEEEEccCCCcccccccc-------CCCCCeeEeehhccCChHHHHHHHHHHHHHHHHHHCCCCCeEEeecC
Confidence 48999999987643311110000 001223344333333333 36777777888888888633 35563
No 67
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=31.93 E-value=77 Score=25.32 Aligned_cols=26 Identities=31% Similarity=0.303 Sum_probs=22.9
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhC
Q 021232 243 LKAPNAFARYHNTMLKAELHKLRQKY 268 (315)
Q Consensus 243 ~~~~n~~~~~fN~~L~~~l~~L~~~~ 268 (315)
.++.+++++.||+.|.+.|++.++++
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H 95 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKH 95 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 35778899999999999999999876
No 68
>KOG0907 consensus Thioredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=30.58 E-value=70 Score=24.58 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhhCCCcEEEEEeccHHHHHHHh
Q 021232 256 MLKAELHKLRQKYPHANIIYADYYGAAMRFYH 287 (315)
Q Consensus 256 ~L~~~l~~L~~~~~g~~i~~~D~~~~~~~i~~ 287 (315)
.+.-.+.+|..+||++.++.+|+.. ..++.+
T Consensus 38 ~i~P~~~~La~~y~~v~Flkvdvde-~~~~~~ 68 (106)
T KOG0907|consen 38 AIAPKFEKLAEKYPDVVFLKVDVDE-LEEVAK 68 (106)
T ss_pred hhhhHHHHHHHHCCCCEEEEEeccc-CHhHHH
Confidence 3456889999999999999999998 555443
No 69
>PRK09121 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=28.93 E-value=1.4e+02 Score=28.08 Aligned_cols=30 Identities=10% Similarity=-0.017 Sum_probs=26.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhCCcEEEEc
Q 021232 185 LRASVPLVVKAITNATRLLIEEGAVELVVP 214 (315)
Q Consensus 185 ~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~ 214 (315)
..+++.+++..+.+.++.|+++|+|.|-|=
T Consensus 147 ~~el~~dlA~al~~Ei~~L~~aG~~~IQiD 176 (339)
T PRK09121 147 REKLAWEFAKILNQEAKELEAAGVDIIQFD 176 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEec
Confidence 456788899999999999999999998663
No 70
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=28.62 E-value=1.6e+02 Score=25.50 Aligned_cols=49 Identities=20% Similarity=0.207 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEE
Q 021232 194 KAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANI 273 (315)
Q Consensus 194 ~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i 273 (315)
.++...++.|.+.|++++.+..+ +.+ ...++++.+++|+++|
T Consensus 138 ~Tl~~ai~~L~~~G~~~I~~~~l--l~~------------------------------------~~gl~~l~~~~p~v~i 179 (209)
T PRK00129 138 GSAIAAIDLLKKRGAKNIKVLCL--VAA------------------------------------PEGIKALEEAHPDVEI 179 (209)
T ss_pred HHHHHHHHHHHHcCCCEEEEEEE--ecC------------------------------------HHHHHHHHHHCCCcEE
Confidence 36778889999999999988765 110 3445667788899999
Q ss_pred EEEeccH
Q 021232 274 IYADYYG 280 (315)
Q Consensus 274 ~~~D~~~ 280 (315)
+..-+-.
T Consensus 180 ~~~~iD~ 186 (209)
T PRK00129 180 YTAAIDE 186 (209)
T ss_pred EEEeecC
Confidence 8765443
No 71
>PRK15305 putative fimbrial protein StkG; Provisional
Probab=28.35 E-value=54 Score=31.02 Aligned_cols=40 Identities=28% Similarity=0.306 Sum_probs=29.3
Q ss_pred CchhHHHHHHHHHHhhcCCCCcccEEEEcCC--cccccCCCC
Q 021232 1 MKFFHLVFALCLLRSVSTSHLKYHAIFNFGD--SLSDTGNFL 40 (315)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~l~vFGD--SlsD~Gn~~ 40 (315)
|||++.|++++++....-.+....-=|-||| +..|.|-..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 (353)
T PRK15305 1 MKLFPYLAALLLLSASGVAYGALECKFYNGDTRQIMSPGVQP 42 (353)
T ss_pred CcchHHHHHHHHHhcccccccceeeEEecCCceEecCCCCcc
Confidence 9999999999988765444445666778999 566766544
No 72
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=25.47 E-value=2.2e+02 Score=26.11 Aligned_cols=35 Identities=20% Similarity=0.253 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhhCCCcEEEEEeccHHHHHHHhCcCCCCCccCC
Q 021232 256 MLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGQLIAT 298 (315)
Q Consensus 256 ~L~~~l~~L~~~~~g~~i~~~D~~~~~~~i~~nP~~yGf~~~t 298 (315)
.|.+.++.+.++-+|+.|...-+. ||++||-.+..
T Consensus 114 ~l~~~~~~~~~~~~ga~i~~~~V~--------dP~rfGV~e~d 148 (286)
T COG1209 114 GLSELLEHFAEEGSGATILLYEVD--------DPSRYGVVEFD 148 (286)
T ss_pred ChHHHHHHHhccCCCcEEEEEEcC--------CcccceEEEEc
Confidence 577777777777778888776553 99999976665
No 73
>cd03411 Ferrochelatase_N Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=25.41 E-value=74 Score=26.21 Aligned_cols=24 Identities=29% Similarity=0.360 Sum_probs=19.6
Q ss_pred HHHHHHHHHHhCCcEEEEcCCCCc
Q 021232 196 ITNATRLLIEEGAVELVVPGNFPI 219 (315)
Q Consensus 196 i~~~i~~L~~~GAR~fvv~~lppl 219 (315)
+.+.|++|.+.|+++++|+.+-|.
T Consensus 101 i~~~l~~l~~~g~~~iivlPl~P~ 124 (159)
T cd03411 101 IEEALEELKADGVDRIVVLPLYPQ 124 (159)
T ss_pred HHHHHHHHHHcCCCEEEEEECCcc
Confidence 456678999999999999877653
No 74
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=24.61 E-value=66 Score=25.50 Aligned_cols=52 Identities=19% Similarity=0.230 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEE
Q 021232 194 KAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANI 273 (315)
Q Consensus 194 ~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i 273 (315)
..+.+.+++|.+.|.|+|+|.. ..... | ..| ..|.+.+++++ +|..+|
T Consensus 56 p~~~eaL~~l~~~G~~~V~V~P--------l~l~~------------G---------~e~-~di~~~v~~~~--~~~~~i 103 (127)
T cd03412 56 DTPEEALAKLAADGYTEVIVQS--------LHIIP------------G---------EEY-EKLKREVDAFK--KGFKKI 103 (127)
T ss_pred CCHHHHHHHHHHCCCCEEEEEe--------CeeEC------------c---------HHH-HHHHHHHHHHh--CCCceE
Confidence 3567888999999999999963 33221 0 123 56777777777 577777
Q ss_pred EEEe
Q 021232 274 IYAD 277 (315)
Q Consensus 274 ~~~D 277 (315)
.+..
T Consensus 104 ~~g~ 107 (127)
T cd03412 104 KLGR 107 (127)
T ss_pred EEcc
Confidence 7654
No 75
>TIGR02089 TTC tartrate dehydrogenase. Tartrate dehydrogenase catalyzes the oxidation of both meso- and (+)-tartrate as well as a D-malate. These enzymes are closely related to the 3-isopropylmalate and isohomocitrate dehydrogenases found in TIGR00169 and TIGR02088, respectively.
Probab=24.54 E-value=92 Score=29.54 Aligned_cols=36 Identities=17% Similarity=0.263 Sum_probs=29.4
Q ss_pred HHHHHHHHhhCCCcEEEEEeccHHHHHHHhCcCCCC
Q 021232 258 KAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYG 293 (315)
Q Consensus 258 ~~~l~~L~~~~~g~~i~~~D~~~~~~~i~~nP~~yG 293 (315)
++.+++..++||++.+-..=+-+..+.++.+|.+|.
T Consensus 201 ~~~~~eva~~yp~v~~~~~~vD~~~~~lv~~P~~fD 236 (352)
T TIGR02089 201 DEVFAEVAAEYPDVEWDSYHIDALAARFVLKPETFD 236 (352)
T ss_pred HHHHHHHHhhCCCceEeeehHHHHHHHHhcChhhCc
Confidence 344556677899998888777788999999999996
No 76
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=23.28 E-value=1.4e+02 Score=23.42 Aligned_cols=27 Identities=22% Similarity=0.242 Sum_probs=23.4
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhCC
Q 021232 243 LKAPNAFARYHNTMLKAELHKLRQKYP 269 (315)
Q Consensus 243 ~~~~n~~~~~fN~~L~~~l~~L~~~~~ 269 (315)
.++.+++...||+.|.+.|++.++++.
T Consensus 57 e~q~~~~~~rF~~~L~~~L~~yq~~H~ 83 (112)
T TIGR02744 57 EAQQKALLGRFNALLEAELQAWQAQHH 83 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 457788999999999999999998763
No 77
>TIGR00175 mito_nad_idh isocitrate dehydrogenase, NAD-dependent, mitochondrial type. The NADP-dependent IDH of Thermus aquaticus thermophilus strain HB8 resembles these NAD-dependent IDH, except for the residues involved in cofactor specificity, much more closely than it resembles other prokaryotic NADP-dependent IDH, including that of Thermus aquaticus strain YT1.
Probab=22.84 E-value=1.1e+02 Score=28.65 Aligned_cols=37 Identities=11% Similarity=0.247 Sum_probs=29.8
Q ss_pred HHHHHHHHHhhCCCcEEEEEeccHHHHHHHhCcCCCC
Q 021232 257 LKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYG 293 (315)
Q Consensus 257 L~~~l~~L~~~~~g~~i~~~D~~~~~~~i~~nP~~yG 293 (315)
.++.+++..++||++.+-..=+-+....++.+|..|.
T Consensus 182 f~~~~~eva~~yp~v~~~~~~vDa~~~~lv~~P~~fd 218 (333)
T TIGR00175 182 FLNVCREVAKEYPDITFESMIVDNTCMQLVSRPSQFD 218 (333)
T ss_pred HHHHHHHHHHHCCCCeeeeeeHHHHHHHHhcCccccc
Confidence 3445566667899998888888889999999999985
No 78
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=22.08 E-value=94 Score=23.71 Aligned_cols=19 Identities=11% Similarity=0.190 Sum_probs=15.0
Q ss_pred HHHHHHHHHHhCCcEEEEc
Q 021232 196 ITNATRLLIEEGAVELVVP 214 (315)
Q Consensus 196 i~~~i~~L~~~GAR~fvv~ 214 (315)
+.+.+++|.+.|+|+|+++
T Consensus 44 i~~~l~~l~~~G~~~i~lv 62 (103)
T cd03413 44 LDDVLAKLKKAGIKKVTLM 62 (103)
T ss_pred HHHHHHHHHHcCCCEEEEE
Confidence 3455678899999999884
No 79
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=22.06 E-value=42 Score=28.83 Aligned_cols=18 Identities=33% Similarity=0.436 Sum_probs=14.5
Q ss_pred cccEEEEcCCcccccCCC
Q 021232 22 KYHAIFNFGDSLSDTGNF 39 (315)
Q Consensus 22 ~~~~l~vFGDSlsD~Gn~ 39 (315)
....+++||||.+|.--.
T Consensus 201 ~~~~~~~~GD~~ND~~Ml 218 (254)
T PF08282_consen 201 SPEDIIAFGDSENDIEML 218 (254)
T ss_dssp SGGGEEEEESSGGGHHHH
T ss_pred ccceeEEeecccccHhHH
Confidence 457899999999997543
No 80
>PRK06520 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=21.88 E-value=1.2e+02 Score=28.79 Aligned_cols=30 Identities=17% Similarity=0.181 Sum_probs=26.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhCCcEEEEc
Q 021232 185 LRASVPLVVKAITNATRLLIEEGAVELVVP 214 (315)
Q Consensus 185 ~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~ 214 (315)
..+++.+++..+.+.++.|+++|+|.|-+=
T Consensus 161 ~~~~~~dlA~al~~Ei~~L~~aG~~~IQiD 190 (368)
T PRK06520 161 LDDYFDDLAKTWRDAIKAFYDAGCRYLQLD 190 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEec
Confidence 457788999999999999999999997663
No 81
>PRK00772 3-isopropylmalate dehydrogenase; Provisional
Probab=21.68 E-value=1.1e+02 Score=28.99 Aligned_cols=39 Identities=15% Similarity=0.365 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEeccHHHHHHHhCcCCCC
Q 021232 255 TMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYG 293 (315)
Q Consensus 255 ~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~i~~nP~~yG 293 (315)
....+..+++.++||++.+-..=+-...+.++.+|.+|.
T Consensus 199 glf~~~~~eva~eyp~i~~~~~~vDa~~~~lv~~P~~fD 237 (358)
T PRK00772 199 RLWREVVTEVAKEYPDVELSHMYVDNAAMQLVRNPKQFD 237 (358)
T ss_pred hHHHHHHHHHHhHCCCceEEEEeHHHHHHHHhhCcccCe
Confidence 334455567777899998888888889999999999985
No 82
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.50 E-value=2.7e+02 Score=24.83 Aligned_cols=66 Identities=14% Similarity=0.190 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHhhcchhhhHhhhccCeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCCcEEE
Q 021232 133 SVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELV 212 (315)
Q Consensus 133 ~~Qv~~f~~~~~~~~~g~~~~~~~~~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fv 212 (315)
..+...|++..+... .-.++||++| |+...+.... ..++..+++...|.++++.|.|-+.
T Consensus 13 p~~t~~fl~Fl~~~a--------~~ad~lyilG-----Difd~w~g~~-------~~~~~~~~V~~~l~~~a~~G~~v~~ 72 (237)
T COG2908 13 PALTAFFLDFLREEA--------AQADALYILG-----DIFDGWIGDD-------EPPQLHRQVAQKLLRLARKGTRVYY 72 (237)
T ss_pred cHHHHHHHHHHHhcc--------ccCcEEEEec-----hhhhhhhcCC-------cccHHHHHHHHHHHHHHhcCCeEEE
Confidence 355666666654321 1357899986 7776553111 2345677788888999999999888
Q ss_pred EcCCCC
Q 021232 213 VPGNFP 218 (315)
Q Consensus 213 v~~lpp 218 (315)
+.+--+
T Consensus 73 i~GN~D 78 (237)
T COG2908 73 IHGNHD 78 (237)
T ss_pred ecCchH
Confidence 877665
No 83
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=21.49 E-value=1.2e+02 Score=22.29 Aligned_cols=23 Identities=35% Similarity=0.361 Sum_probs=17.6
Q ss_pred HHHHHHHHHHhCCcEEEEcCCCC
Q 021232 196 ITNATRLLIEEGAVELVVPGNFP 218 (315)
Q Consensus 196 i~~~i~~L~~~GAR~fvv~~lpp 218 (315)
+.+.+++|.+.|.++++|+-+-+
T Consensus 47 i~~~l~~l~~~g~~~vvvvPl~~ 69 (101)
T cd03409 47 TEEAIRELAEEGYQRVVIVPLAP 69 (101)
T ss_pred HHHHHHHHHHcCCCeEEEEeCcc
Confidence 44567889999999999975544
No 84
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=21.31 E-value=3.8e+02 Score=24.34 Aligned_cols=63 Identities=11% Similarity=0.031 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHhhcchhhhHhhhccCeEEEeeecccccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCCcEEE
Q 021232 133 SVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELV 212 (315)
Q Consensus 133 ~~Qv~~f~~~~~~~~~g~~~~~~~~~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fv 212 (315)
..++++|++..+... ...+...++| -+|+|=+.. ++.++++.+.|..|+..|.|-++
T Consensus 16 ~~e~~~~l~~f~~~~-------~~~~~~f~VI-K~GG~~~~~---------------~~~~~~l~~dla~L~~lGl~~Vl 72 (271)
T cd04236 16 PREARYWLTQFQIAM-------PNDWPAFAVL-EVDHSVFRS---------------LEMVQSLSFGLAFLQRMDMKLLV 72 (271)
T ss_pred HHHHHHHHHHhhccC-------CCCCCCEEEE-EEChhhhcC---------------chhHHHHHHHHHHHHHCCCeEEE
Confidence 456667765543221 0124567788 788875421 12455677888999999999999
Q ss_pred EcCCCC
Q 021232 213 VPGNFP 218 (315)
Q Consensus 213 v~~lpp 218 (315)
|.+-.|
T Consensus 73 VHGggp 78 (271)
T cd04236 73 VMGLSA 78 (271)
T ss_pred EeCCCh
Confidence 999877
No 85
>PRK08194 tartrate dehydrogenase; Provisional
Probab=21.22 E-value=1.1e+02 Score=28.97 Aligned_cols=36 Identities=14% Similarity=0.254 Sum_probs=29.3
Q ss_pred HHHHHHHHhhCCCcEEEEEeccHHHHHHHhCcCCCC
Q 021232 258 KAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYG 293 (315)
Q Consensus 258 ~~~l~~L~~~~~g~~i~~~D~~~~~~~i~~nP~~yG 293 (315)
++.+.+..++||++.+-..-+-...+.++.||.+|.
T Consensus 198 ~~~~~eva~~yp~V~~~~~~vDa~~~~Lv~~P~~fD 233 (352)
T PRK08194 198 DEVFQEVGKDYPEIETDSQHIDALAAFFVTRPEEFD 233 (352)
T ss_pred HHHHHHHHhhCCCceeeehhHHHHHHHHhhChhhCc
Confidence 344556677899998888777888999999999996
No 86
>PRK06233 hypothetical protein; Provisional
Probab=20.89 E-value=1.3e+02 Score=28.59 Aligned_cols=31 Identities=10% Similarity=0.094 Sum_probs=26.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhCCcEEEEcC
Q 021232 185 LRASVPLVVKAITNATRLLIEEGAVELVVPG 215 (315)
Q Consensus 185 ~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~ 215 (315)
..+++.+++..+.+.++.|+++|+|.+-|=.
T Consensus 162 ~eel~~dlA~a~~~Ei~~L~~aG~~~IQiDe 192 (372)
T PRK06233 162 WDDYLDDLAQAYHDTIQHFYDLGARYIQLDD 192 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEEcC
Confidence 4567889999999999999999999987643
No 87
>PLN00123 isocitrate dehydrogenase (NAD+)
Probab=20.83 E-value=1.5e+02 Score=28.24 Aligned_cols=36 Identities=14% Similarity=0.227 Sum_probs=30.1
Q ss_pred HHHHHHHHhhCCCcEEEEEeccHHHHHHHhCcCCCC
Q 021232 258 KAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYG 293 (315)
Q Consensus 258 ~~~l~~L~~~~~g~~i~~~D~~~~~~~i~~nP~~yG 293 (315)
++.+++..++||++.+-..=+-+..+.++.+|.+|.
T Consensus 206 ~~~~~eva~eyPdV~~~~~~VDa~~~~Lv~~P~~fD 241 (360)
T PLN00123 206 LESCREVAKKYPGIKYNEIIVDNCCMQLVSKPEQFD 241 (360)
T ss_pred HHHHHHHHhhCCCceEeeeeHHHHHHHHhhCcccCc
Confidence 444566677899999888888889999999999996
No 88
>PRK03437 3-isopropylmalate dehydrogenase; Provisional
Probab=20.62 E-value=1.2e+02 Score=28.70 Aligned_cols=36 Identities=14% Similarity=0.397 Sum_probs=29.5
Q ss_pred HHHHHHHHhhCCCcEEEEEeccHHHHHHHhCcCCCC
Q 021232 258 KAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYG 293 (315)
Q Consensus 258 ~~~l~~L~~~~~g~~i~~~D~~~~~~~i~~nP~~yG 293 (315)
++.+.+..++||++++-..=+-+..+.++.+|.+|.
T Consensus 198 ~~~~~eva~~ypdV~~~~~~vDa~~~~Lv~~P~~fD 233 (344)
T PRK03437 198 QRTVDEVAAEYPDVTVDYQHVDAATIFMVTDPSRFD 233 (344)
T ss_pred HHHHHHHHhhCCCceEeehhHHHHHHHHhcCcccCc
Confidence 445566778899998888777788899999999996
No 89
>cd03415 CbiX_CbiC Archaeal sirohydrochlorin cobalt chelatase (CbiX) single domain. Proteins in this subgroup contain a single CbiX domain N-terminal to a precorrin-8X methylmutase (CbiC) domain. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, while CbiC catalyzes the conversion of cobalt-precorrin 8 to cobyrinic acid by methyl rearrangement. Both CbiX and CbiC are involved in vitamin B12 biosynthesis.
Probab=20.39 E-value=1.1e+02 Score=24.40 Aligned_cols=19 Identities=16% Similarity=0.293 Sum_probs=16.3
Q ss_pred HHHHHHHHHHhCCcEEEEc
Q 021232 196 ITNATRLLIEEGAVELVVP 214 (315)
Q Consensus 196 i~~~i~~L~~~GAR~fvv~ 214 (315)
+.+.+++|.+.|+++|+|+
T Consensus 46 l~~~l~~l~~~G~~~ivVv 64 (125)
T cd03415 46 WRDLLNELLSEGYGHIIIA 64 (125)
T ss_pred HHHHHHHHHHCCCCEEEEe
Confidence 5567789999999999996
No 90
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated
Probab=20.26 E-value=1.6e+02 Score=29.16 Aligned_cols=60 Identities=22% Similarity=0.279 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEE
Q 021232 194 KAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANI 273 (315)
Q Consensus 194 ~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i 273 (315)
.++.+.++.|.+.|++-++| .. +..|+..+.++++++++++|+..+
T Consensus 226 ~~~~~~a~~Lv~aGvd~i~~-D~---------------------------------a~~~~~~~~~~i~~ik~~~p~~~v 271 (479)
T PRK07807 226 GDVAAKARALLEAGVDVLVV-DT---------------------------------AHGHQEKMLEALRAVRALDPGVPI 271 (479)
T ss_pred hhHHHHHHHHHHhCCCEEEE-ec---------------------------------cCCccHHHHHHHHHHHHHCCCCeE
Confidence 46778888999999988665 11 122477788999999999999988
Q ss_pred EEEeccH--HHHHHHh
Q 021232 274 IYADYYG--AAMRFYH 287 (315)
Q Consensus 274 ~~~D~~~--~~~~i~~ 287 (315)
+-.|+-+ -..++++
T Consensus 272 ~agnv~t~~~a~~l~~ 287 (479)
T PRK07807 272 VAGNVVTAEGTRDLVE 287 (479)
T ss_pred EeeccCCHHHHHHHHH
Confidence 8866543 4444444
Done!