Query 021235
Match_columns 315
No_of_seqs 209 out of 1534
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 14:43:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021235.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021235hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1j0a_A 1-aminocyclopropane-1-c 100.0 3.2E-48 1.1E-52 366.6 20.7 256 24-299 1-272 (325)
2 4d9b_A D-cysteine desulfhydras 100.0 1.3E-46 4.4E-51 358.3 20.6 263 26-299 14-291 (342)
3 1f2d_A 1-aminocyclopropane-1-c 100.0 8E-44 2.7E-48 338.6 21.0 260 32-299 3-285 (341)
4 4aec_A Cysteine synthase, mito 100.0 2.6E-43 8.9E-48 344.0 18.3 261 11-299 72-368 (430)
5 1tzj_A ACC deaminase, 1-aminoc 100.0 1E-42 3.5E-47 330.2 20.8 259 32-299 3-284 (338)
6 2egu_A Cysteine synthase; O-ac 100.0 2.5E-40 8.7E-45 310.3 20.1 234 39-299 7-257 (308)
7 3tbh_A O-acetyl serine sulfhyd 100.0 3E-40 1E-44 313.6 20.0 235 39-299 14-265 (334)
8 4h27_A L-serine dehydratase/L- 100.0 1.5E-40 5.2E-45 319.1 17.6 243 28-299 30-296 (364)
9 3l6b_A Serine racemase; pyrido 100.0 2.9E-41 9.8E-46 322.0 11.5 244 26-300 7-277 (346)
10 1y7l_A O-acetylserine sulfhydr 100.0 6.8E-40 2.3E-44 308.4 20.5 234 39-299 6-263 (316)
11 2q3b_A Cysteine synthase A; py 100.0 5.7E-40 2E-44 308.5 19.4 236 39-300 9-261 (313)
12 2v03_A Cysteine synthase B; py 100.0 1.8E-39 6.2E-44 304.0 22.3 228 39-299 3-246 (303)
13 3dwg_A Cysteine synthase B; su 100.0 1E-39 3.5E-44 308.7 19.2 232 39-299 8-258 (325)
14 1ve1_A O-acetylserine sulfhydr 100.0 7.4E-40 2.5E-44 306.6 17.7 232 41-299 4-254 (304)
15 1p5j_A L-serine dehydratase; l 100.0 1.2E-39 4.1E-44 313.7 18.8 242 30-300 32-297 (372)
16 1z7w_A Cysteine synthase; tran 100.0 1.3E-39 4.5E-44 307.3 17.7 235 39-299 8-260 (322)
17 3vc3_A Beta-cyanoalnine syntha 100.0 3E-39 1E-43 307.9 19.7 240 34-299 24-280 (344)
18 2pqm_A Cysteine synthase; OASS 100.0 1.6E-39 5.5E-44 309.5 17.5 235 39-299 16-271 (343)
19 3aey_A Threonine synthase; PLP 100.0 1.2E-39 4.2E-44 311.0 16.1 232 39-299 21-280 (351)
20 2d1f_A Threonine synthase; ami 100.0 1.5E-39 5.2E-44 311.5 16.0 233 39-299 31-289 (360)
21 2zsj_A Threonine synthase; PLP 100.0 2.8E-39 9.7E-44 308.6 15.9 232 39-299 23-282 (352)
22 2rkb_A Serine dehydratase-like 100.0 5.7E-39 2E-43 302.3 17.6 229 43-299 4-256 (318)
23 2gn0_A Threonine dehydratase c 100.0 3.6E-40 1.2E-44 313.9 9.5 242 27-299 23-288 (342)
24 1v71_A Serine racemase, hypoth 100.0 3.3E-39 1.1E-43 304.7 13.0 232 39-299 19-274 (323)
25 1ve5_A Threonine deaminase; ri 100.0 1.5E-39 5.2E-44 305.2 10.6 234 39-299 13-270 (311)
26 3pc3_A CG1753, isoform A; CBS, 100.0 4E-38 1.4E-42 315.5 21.0 238 39-299 53-314 (527)
27 1o58_A O-acetylserine sulfhydr 100.0 1.3E-38 4.6E-43 298.1 13.1 230 41-299 15-258 (303)
28 1tdj_A Biosynthetic threonine 100.0 3.4E-39 1.2E-43 320.8 8.9 241 31-300 16-280 (514)
29 1jbq_A B, cystathionine beta-s 100.0 2.1E-37 7.3E-42 303.2 16.9 238 39-299 101-362 (435)
30 4d9i_A Diaminopropionate ammon 100.0 4.1E-37 1.4E-41 298.4 18.2 232 44-299 42-326 (398)
31 3ss7_X D-serine dehydratase; t 100.0 6.3E-37 2.2E-41 300.8 16.9 241 38-299 70-377 (442)
32 3iau_A Threonine deaminase; py 100.0 4.7E-38 1.6E-42 301.9 8.3 238 33-299 47-308 (366)
33 1wkv_A Cysteine synthase; homo 100.0 1.1E-34 3.8E-39 280.5 19.5 227 45-299 95-332 (389)
34 1x1q_A Tryptophan synthase bet 100.0 6.1E-35 2.1E-39 284.9 16.0 239 45-299 76-365 (418)
35 1v8z_A Tryptophan synthase bet 100.0 6E-35 2E-39 281.8 15.5 238 45-299 49-336 (388)
36 1qop_B Tryptophan synthase bet 100.0 1.6E-34 5.6E-39 279.8 14.4 237 45-299 54-340 (396)
37 2o2e_A Tryptophan synthase bet 100.0 5.9E-33 2E-37 271.1 16.6 238 45-299 80-367 (422)
38 1e5x_A Threonine synthase; thr 100.0 1.2E-32 4E-37 273.4 15.2 231 40-299 124-395 (486)
39 1vb3_A Threonine synthase; PLP 99.9 3.4E-27 1.2E-31 230.8 12.2 223 45-297 82-343 (428)
40 4f4f_A Threonine synthase; str 99.9 2.3E-22 7.7E-27 198.1 16.4 178 47-259 94-289 (468)
41 1kl7_A Threonine synthase; thr 99.9 1.6E-21 5.5E-26 194.2 17.9 193 44-259 94-307 (514)
42 3v7n_A Threonine synthase; ssg 99.9 1.2E-20 4.1E-25 186.3 18.3 186 47-258 103-303 (487)
43 3d02_A Putative LACI-type tran 89.9 9.2 0.00032 33.3 16.3 159 86-255 53-224 (303)
44 3gbv_A Putative LACI-family tr 88.4 11 0.00037 32.7 13.9 201 84-308 59-275 (304)
45 3fwz_A Inner membrane protein 87.9 5.9 0.0002 31.1 10.7 30 96-127 8-37 (140)
46 8abp_A L-arabinose-binding pro 87.6 9.7 0.00033 33.2 13.1 161 84-256 47-234 (306)
47 3r2j_A Alpha/beta-hydrolase-li 85.0 6.9 0.00024 34.1 10.4 93 60-158 120-218 (227)
48 3m9w_A D-xylose-binding peripl 84.8 7.2 0.00025 34.4 10.8 160 85-255 49-223 (313)
49 3pi7_A NADH oxidoreductase; gr 84.7 7.5 0.00026 35.5 11.1 63 83-157 153-215 (349)
50 1tjy_A Sugar transport protein 83.5 23 0.0008 31.3 14.9 160 85-255 51-223 (316)
51 3hut_A Putative branched-chain 82.7 15 0.00051 32.8 12.2 152 87-259 64-232 (358)
52 3gbc_A Pyrazinamidase/nicotina 81.0 2.2 7.6E-05 35.9 5.4 88 60-155 90-183 (186)
53 2fvy_A D-galactose-binding per 80.5 28 0.00094 30.1 12.8 35 220-256 203-238 (309)
54 3v8e_A Nicotinamidase; hydrola 80.4 3.3 0.00011 35.7 6.5 64 91-155 150-214 (216)
55 3k4h_A Putative transcriptiona 78.6 31 0.0011 29.6 20.5 35 219-255 191-229 (292)
56 3gv0_A Transcriptional regulat 78.3 32 0.0011 29.6 19.1 37 219-257 187-227 (288)
57 1vp8_A Hypothetical protein AF 77.9 13 0.00044 31.9 9.0 81 76-159 25-106 (201)
58 1im5_A 180AA long hypothetical 76.8 3.6 0.00012 34.1 5.4 90 60-155 88-178 (180)
59 2wt9_A Nicotinamidase; hydrola 76.6 4.9 0.00017 35.0 6.4 63 91-156 163-227 (235)
60 3two_A Mannitol dehydrogenase; 76.2 6 0.0002 36.1 7.2 48 96-156 178-225 (348)
61 3gyb_A Transcriptional regulat 76.0 36 0.0012 29.0 13.8 188 87-308 53-252 (280)
62 3pgx_A Carveol dehydrogenase; 75.2 24 0.00083 30.7 10.8 31 96-128 17-47 (280)
63 3ksm_A ABC-type sugar transpor 74.2 39 0.0013 28.5 13.4 160 85-256 49-223 (276)
64 4fn4_A Short chain dehydrogena 73.9 19 0.00066 31.7 9.7 57 94-159 7-63 (254)
65 3iup_A Putative NADPH:quinone 73.7 17 0.00057 33.6 9.7 63 83-157 160-222 (379)
66 3sg0_A Extracellular ligand-bi 72.6 41 0.0014 29.9 12.0 152 87-259 81-252 (386)
67 3snr_A Extracellular ligand-bi 72.5 50 0.0017 29.0 15.1 150 87-259 61-228 (362)
68 3hu5_A Isochorismatase family 72.5 4.1 0.00014 34.7 4.7 85 60-156 100-185 (204)
69 3lop_A Substrate binding perip 71.9 54 0.0018 29.1 14.2 151 87-258 65-233 (364)
70 3huu_A Transcription regulator 71.8 49 0.0017 28.7 19.2 36 219-256 201-240 (305)
71 4g81_D Putative hexonate dehyd 71.1 20 0.00068 31.6 9.1 75 94-181 9-83 (255)
72 3qk7_A Transcriptional regulat 70.8 51 0.0017 28.4 18.0 37 219-257 186-226 (294)
73 3o94_A Nicotinamidase; hydrola 70.8 5.9 0.0002 34.1 5.4 63 91-156 139-203 (211)
74 4evq_A Putative ABC transporte 70.6 23 0.0008 31.6 9.8 147 87-254 74-239 (375)
75 4ggo_A Trans-2-enoyl-COA reduc 70.5 33 0.0011 32.6 10.8 100 96-231 51-151 (401)
76 3uve_A Carveol dehydrogenase ( 70.4 44 0.0015 29.1 11.3 32 96-129 13-44 (286)
77 3hcw_A Maltose operon transcri 69.4 55 0.0019 28.2 18.3 156 86-255 60-229 (295)
78 3eef_A N-carbamoylsarcosine am 69.2 11 0.00037 31.3 6.6 63 91-158 106-169 (182)
79 4a2c_A Galactitol-1-phosphate 68.9 12 0.00039 33.9 7.3 52 96-159 162-213 (346)
80 2dri_A D-ribose-binding protei 68.8 53 0.0018 27.9 12.8 157 86-256 49-217 (271)
81 3k9c_A Transcriptional regulat 68.8 56 0.0019 28.1 19.4 37 219-257 184-224 (289)
82 3u5t_A 3-oxoacyl-[acyl-carrier 68.4 52 0.0018 28.5 11.3 58 93-158 26-83 (267)
83 4dmm_A 3-oxoacyl-[acyl-carrier 67.6 61 0.0021 28.0 12.2 55 97-158 30-84 (269)
84 3l9w_A Glutathione-regulated p 67.3 31 0.0011 32.6 10.1 48 96-156 5-52 (413)
85 3g85_A Transcriptional regulat 67.2 59 0.002 27.7 12.4 34 219-254 187-224 (289)
86 1jx6_A LUXP protein; protein-l 67.2 66 0.0023 28.3 13.8 155 86-255 96-268 (342)
87 1kol_A Formaldehyde dehydrogen 67.1 13 0.00043 34.6 7.3 48 96-155 187-234 (398)
88 3td9_A Branched chain amino ac 67.0 68 0.0023 28.4 14.7 152 87-259 73-242 (366)
89 4iin_A 3-ketoacyl-acyl carrier 66.8 62 0.0021 27.8 12.2 56 97-159 31-86 (271)
90 1nf9_A Phenazine biosynthesis 66.3 6.5 0.00022 33.3 4.7 62 91-155 138-200 (207)
91 3t7c_A Carveol dehydrogenase; 66.2 69 0.0023 28.1 13.3 32 96-129 30-61 (299)
92 3v2g_A 3-oxoacyl-[acyl-carrier 66.2 66 0.0022 27.9 12.0 56 96-159 33-88 (271)
93 3tg2_A Vibriobactin-specific i 65.6 6.1 0.00021 34.3 4.4 63 91-156 134-197 (223)
94 3is3_A 17BETA-hydroxysteroid d 65.2 61 0.0021 27.9 11.1 55 97-159 21-75 (270)
95 3brs_A Periplasmic binding pro 65.1 64 0.0022 27.4 12.1 160 85-257 56-227 (289)
96 4e3z_A Putative oxidoreductase 65.0 67 0.0023 27.6 11.7 56 97-159 28-83 (272)
97 1p9o_A Phosphopantothenoylcyst 64.4 19 0.00064 33.0 7.6 39 92-130 34-89 (313)
98 3r1i_A Short-chain type dehydr 64.4 72 0.0025 27.7 11.7 54 96-158 34-87 (276)
99 3goh_A Alcohol dehydrogenase, 64.2 6.8 0.00023 35.1 4.7 47 96-156 144-190 (315)
100 4eye_A Probable oxidoreductase 64.0 10 0.00036 34.4 5.9 49 96-156 161-209 (342)
101 3nx4_A Putative oxidoreductase 63.9 16 0.00054 32.7 7.1 47 98-156 150-196 (324)
102 2h3h_A Sugar ABC transporter, 63.9 73 0.0025 27.6 13.9 158 86-256 49-218 (313)
103 3osu_A 3-oxoacyl-[acyl-carrier 63.8 67 0.0023 27.2 12.2 55 97-158 6-60 (246)
104 1piw_A Hypothetical zinc-type 63.7 13 0.00043 34.1 6.5 48 96-156 181-228 (360)
105 3s2e_A Zinc-containing alcohol 63.5 8.1 0.00028 35.0 5.1 49 96-157 168-216 (340)
106 3kke_A LACI family transcripti 63.4 74 0.0025 27.5 20.8 35 219-255 196-234 (303)
107 3gqv_A Enoyl reductase; medium 63.4 15 0.00051 33.8 7.0 49 96-157 166-214 (371)
108 2gk4_A Conserved hypothetical 63.3 8.2 0.00028 33.9 4.8 37 94-130 3-53 (232)
109 2h0a_A TTHA0807, transcription 63.1 68 0.0023 27.0 12.4 36 219-256 179-218 (276)
110 3edm_A Short chain dehydrogena 63.0 72 0.0025 27.3 11.4 55 96-158 10-64 (259)
111 3hb7_A Isochorismatase hydrola 63.0 6.1 0.00021 33.6 3.9 61 91-155 116-177 (204)
112 1yac_A Ycacgp, YCAC gene produ 62.6 5.6 0.00019 34.0 3.6 64 90-156 100-164 (208)
113 4e21_A 6-phosphogluconate dehy 62.2 96 0.0033 28.5 12.3 29 97-127 24-52 (358)
114 3ot4_A Putative isochorismatas 62.2 9.2 0.00032 33.4 5.0 85 60-156 133-218 (236)
115 1e3j_A NADP(H)-dependent ketos 61.5 19 0.00064 32.7 7.2 48 96-156 170-217 (352)
116 3oid_A Enoyl-[acyl-carrier-pro 61.3 78 0.0027 27.1 11.5 58 94-159 4-61 (258)
117 3dbi_A Sugar-binding transcrip 61.2 86 0.0029 27.6 21.5 36 219-256 241-280 (338)
118 3ipc_A ABC transporter, substr 61.0 87 0.003 27.5 17.0 152 87-259 62-231 (356)
119 3qwb_A Probable quinone oxidor 60.9 13 0.00043 33.6 5.9 51 96-158 150-200 (334)
120 3tqh_A Quinone oxidoreductase; 60.7 9.7 0.00033 34.2 5.0 48 96-156 154-201 (321)
121 3oec_A Carveol dehydrogenase ( 60.5 91 0.0031 27.6 13.1 32 97-129 48-79 (317)
122 4ej6_A Putative zinc-binding d 60.3 16 0.00056 33.6 6.6 49 96-156 184-232 (370)
123 3jy6_A Transcriptional regulat 59.9 79 0.0027 26.8 17.5 37 219-257 180-220 (276)
124 2ioy_A Periplasmic sugar-bindi 59.9 81 0.0028 26.9 14.2 157 86-256 49-218 (283)
125 1j2r_A Hypothetical isochorism 59.7 6.5 0.00022 33.1 3.4 63 60-132 106-169 (199)
126 1xa0_A Putative NADPH dependen 59.5 17 0.00057 32.6 6.4 48 97-156 152-199 (328)
127 1pl8_A Human sorbitol dehydrog 59.4 19 0.00065 32.8 6.8 49 96-156 173-221 (356)
128 2fq1_A Isochorismatase; ENTB, 59.3 9.7 0.00033 34.0 4.7 64 91-157 141-205 (287)
129 3fbg_A Putative arginate lyase 59.2 9.9 0.00034 34.6 4.9 49 96-156 152-200 (346)
130 1h2b_A Alcohol dehydrogenase; 59.1 15 0.00053 33.5 6.2 48 96-156 188-236 (359)
131 3h5o_A Transcriptional regulat 59.0 95 0.0032 27.3 18.0 35 219-255 238-276 (339)
132 4b4k_A N5-carboxyaminoimidazol 58.6 23 0.00077 29.9 6.4 58 206-271 67-124 (181)
133 1iz0_A Quinone oxidoreductase; 58.5 17 0.00057 32.2 6.2 49 96-156 127-175 (302)
134 4iiu_A 3-oxoacyl-[acyl-carrier 58.5 87 0.003 26.7 12.2 55 97-158 28-82 (267)
135 3krt_A Crotonyl COA reductase; 58.3 11 0.00039 35.8 5.3 50 96-157 230-279 (456)
136 4da9_A Short-chain dehydrogena 58.2 93 0.0032 27.0 12.3 54 97-158 32-85 (280)
137 2dph_A Formaldehyde dismutase; 58.1 18 0.0006 33.6 6.5 48 96-155 187-234 (398)
138 3kjx_A Transcriptional regulat 58.1 99 0.0034 27.3 16.6 157 86-256 116-285 (344)
139 1uuf_A YAHK, zinc-type alcohol 57.8 18 0.00063 33.2 6.5 48 96-156 196-243 (369)
140 2g1u_A Hypothetical protein TM 57.8 16 0.00053 29.0 5.3 31 96-128 20-50 (155)
141 3ek2_A Enoyl-(acyl-carrier-pro 57.3 57 0.002 27.7 9.4 33 97-129 16-49 (271)
142 3ucx_A Short chain dehydrogena 57.2 62 0.0021 27.8 9.6 31 96-128 13-43 (264)
143 1rjw_A ADH-HT, alcohol dehydro 57.2 17 0.00059 32.8 6.1 48 96-156 166-213 (339)
144 3nrc_A Enoyl-[acyl-carrier-pro 57.0 96 0.0033 26.8 11.3 33 97-130 28-62 (280)
145 4a0s_A Octenoyl-COA reductase/ 57.0 13 0.00044 35.2 5.4 49 96-156 222-270 (447)
146 3o74_A Fructose transport syst 56.9 86 0.003 26.2 20.2 72 220-307 180-254 (272)
147 4b7c_A Probable oxidoreductase 56.6 15 0.00053 33.0 5.7 49 96-156 151-200 (336)
148 4gkb_A 3-oxoacyl-[acyl-carrier 56.6 1E+02 0.0034 26.9 12.2 55 94-158 7-61 (258)
149 2b5w_A Glucose dehydrogenase; 56.3 36 0.0012 30.9 8.2 50 96-155 174-226 (357)
150 3ijr_A Oxidoreductase, short c 56.0 1E+02 0.0035 26.9 11.7 56 96-159 49-104 (291)
151 3jyn_A Quinone oxidoreductase; 56.0 12 0.00042 33.6 4.9 50 96-157 142-191 (325)
152 3okf_A 3-dehydroquinate syntha 56.0 58 0.002 30.6 9.7 92 150-256 61-158 (390)
153 4ibo_A Gluconate dehydrogenase 56.0 65 0.0022 27.9 9.6 54 97-158 28-81 (271)
154 4grd_A N5-CAIR mutase, phospho 55.9 25 0.00085 29.4 6.2 57 206-270 57-113 (173)
155 1x9g_A Putative MAR1; structur 55.9 6.7 0.00023 33.4 2.9 59 94-155 106-167 (200)
156 2hcy_A Alcohol dehydrogenase 1 55.8 27 0.00093 31.6 7.2 49 96-156 171-219 (347)
157 3qiv_A Short-chain dehydrogena 55.5 65 0.0022 27.2 9.4 53 97-158 12-64 (253)
158 3uog_A Alcohol dehydrogenase; 55.4 14 0.00048 33.9 5.2 49 96-157 191-239 (363)
159 3gms_A Putative NADPH:quinone 55.3 18 0.00062 32.6 5.9 50 96-157 146-195 (340)
160 2uvd_A 3-oxoacyl-(acyl-carrier 55.1 95 0.0032 26.1 12.2 31 97-128 6-36 (246)
161 4dup_A Quinone oxidoreductase; 54.9 14 0.00049 33.7 5.2 50 96-157 169-218 (353)
162 1zsy_A Mitochondrial 2-enoyl t 54.8 22 0.00077 32.3 6.5 53 96-156 169-221 (357)
163 1nba_A N-carbamoylsarcosine am 54.7 16 0.00056 32.4 5.4 84 60-155 138-222 (264)
164 3s55_A Putative short-chain de 54.7 1E+02 0.0035 26.5 13.3 32 96-129 12-43 (281)
165 3pxx_A Carveol dehydrogenase; 54.5 1E+02 0.0035 26.4 13.3 32 96-129 12-43 (287)
166 3u9l_A 3-oxoacyl-[acyl-carrier 54.3 1.2E+02 0.0041 27.1 12.8 32 97-129 7-38 (324)
167 3fpc_A NADP-dependent alcohol 54.1 14 0.00049 33.5 5.0 49 96-156 168-216 (352)
168 1tt7_A YHFP; alcohol dehydroge 54.0 17 0.00059 32.6 5.5 48 97-156 153-200 (330)
169 3gaf_A 7-alpha-hydroxysteroid 53.9 66 0.0023 27.5 9.2 53 97-158 15-67 (256)
170 3tfo_A Putative 3-oxoacyl-(acy 53.9 69 0.0024 27.7 9.4 53 98-158 7-59 (264)
171 3efb_A Probable SOR-operon reg 53.6 87 0.003 27.4 10.0 85 184-275 28-120 (266)
172 3gk3_A Acetoacetyl-COA reducta 53.3 1.1E+02 0.0037 26.2 11.7 31 97-128 27-57 (269)
173 3llv_A Exopolyphosphatase-rela 53.3 25 0.00086 27.0 5.8 30 96-127 7-36 (141)
174 3e61_A Putative transcriptiona 53.2 1E+02 0.0035 25.9 16.3 35 220-256 177-215 (277)
175 3l49_A ABC sugar (ribose) tran 53.1 1E+02 0.0036 26.0 18.8 163 85-256 52-226 (291)
176 2rjo_A Twin-arginine transloca 52.8 1.2E+02 0.004 26.6 12.7 35 220-256 197-233 (332)
177 3e03_A Short chain dehydrogena 52.7 45 0.0015 28.9 8.0 32 97-130 9-40 (274)
178 3jv7_A ADH-A; dehydrogenase, n 52.6 21 0.0007 32.3 5.8 49 96-157 173-222 (345)
179 3v8b_A Putative dehydrogenase, 52.5 66 0.0022 28.1 9.1 34 94-129 28-61 (283)
180 3rkr_A Short chain oxidoreduct 52.5 75 0.0026 27.1 9.3 54 97-158 31-84 (262)
181 3uko_A Alcohol dehydrogenase c 52.3 22 0.00076 32.6 6.1 49 96-156 195-243 (378)
182 3sju_A Keto reductase; short-c 52.3 82 0.0028 27.3 9.6 56 94-158 24-79 (279)
183 1u7z_A Coenzyme A biosynthesis 52.1 17 0.00057 31.7 4.9 25 105-129 33-57 (226)
184 2cdc_A Glucose dehydrogenase g 52.1 23 0.00079 32.4 6.1 50 96-155 182-231 (366)
185 3qlj_A Short chain dehydrogena 52.1 1.3E+02 0.0043 26.7 11.1 31 97-128 29-59 (322)
186 3txy_A Isochorismatase family 51.9 10 0.00036 32.0 3.4 63 60-132 100-163 (199)
187 3gdg_A Probable NADP-dependent 51.8 94 0.0032 26.4 9.8 35 96-130 21-56 (267)
188 1g0o_A Trihydroxynaphthalene r 51.7 1.2E+02 0.004 26.2 12.2 55 97-158 31-85 (283)
189 3tb6_A Arabinose metabolism tr 51.6 1.1E+02 0.0038 25.9 18.8 33 221-255 202-238 (298)
190 3ftp_A 3-oxoacyl-[acyl-carrier 51.4 1E+02 0.0034 26.6 10.1 31 97-128 30-60 (270)
191 4fs3_A Enoyl-[acyl-carrier-pro 51.2 68 0.0023 27.6 8.8 35 94-129 6-41 (256)
192 1gu7_A Enoyl-[acyl-carrier-pro 51.2 24 0.00081 32.1 6.0 53 96-156 169-221 (364)
193 1t57_A Conserved protein MTH16 51.1 37 0.0013 29.1 6.6 79 76-159 33-113 (206)
194 2gnp_A Transcriptional regulat 51.0 1.2E+02 0.0042 26.4 10.6 93 174-275 12-115 (266)
195 1p0f_A NADP-dependent alcohol 50.9 29 0.00099 31.7 6.6 49 96-156 193-241 (373)
196 1e3i_A Alcohol dehydrogenase, 50.7 27 0.00091 32.0 6.3 49 96-156 197-245 (376)
197 1o4v_A Phosphoribosylaminoimid 50.3 36 0.0012 28.7 6.4 58 206-271 58-115 (183)
198 3miz_A Putative transcriptiona 50.2 1.2E+02 0.0041 25.9 14.7 35 219-255 196-234 (301)
199 1pqw_A Polyketide synthase; ro 50.2 25 0.00085 28.8 5.5 48 96-155 40-87 (198)
200 3tjr_A Short chain dehydrogena 49.9 97 0.0033 27.2 9.9 54 96-158 33-86 (301)
201 4egf_A L-xylulose reductase; s 49.7 1.1E+02 0.0036 26.3 9.9 31 97-128 22-52 (266)
202 3sc4_A Short chain dehydrogena 49.7 51 0.0017 28.8 7.9 32 97-130 12-43 (285)
203 3ksu_A 3-oxoacyl-acyl carrier 49.6 58 0.002 28.0 8.1 57 97-159 14-70 (262)
204 3kkj_A Amine oxidase, flavin-c 49.4 16 0.00054 29.7 4.2 28 96-126 4-31 (336)
205 2jah_A Clavulanic acid dehydro 49.3 1.1E+02 0.0038 25.8 9.8 30 97-128 10-39 (247)
206 1xmp_A PURE, phosphoribosylami 49.3 31 0.0011 28.8 5.7 58 206-271 56-113 (170)
207 3imf_A Short chain dehydrogena 49.3 68 0.0023 27.4 8.5 54 97-158 8-61 (257)
208 2vn8_A Reticulon-4-interacting 49.2 32 0.0011 31.5 6.6 48 96-156 185-232 (375)
209 1l7d_A Nicotinamide nucleotide 49.2 29 0.00099 32.2 6.4 47 96-155 173-219 (384)
210 3lyl_A 3-oxoacyl-(acyl-carrier 49.2 96 0.0033 26.0 9.4 54 97-158 7-60 (247)
211 1u11_A PURE (N5-carboxyaminoim 49.1 37 0.0012 28.6 6.2 58 206-271 66-123 (182)
212 2cf5_A Atccad5, CAD, cinnamyl 49.0 33 0.0011 31.2 6.7 48 96-156 182-230 (357)
213 3ip1_A Alcohol dehydrogenase, 48.9 23 0.00078 33.0 5.6 49 96-156 215-263 (404)
214 3tox_A Short chain dehydrogena 48.8 78 0.0027 27.6 8.9 30 97-127 10-39 (280)
215 1rrm_A Lactaldehyde reductase; 48.7 60 0.002 30.0 8.5 99 146-257 25-142 (386)
216 2c0c_A Zinc binding alcohol de 48.4 20 0.00067 32.9 5.0 49 96-156 165-213 (362)
217 1usg_A Leucine-specific bindin 48.3 1.4E+02 0.0046 26.0 17.7 152 88-260 63-232 (346)
218 3bfj_A 1,3-propanediol oxidore 48.3 58 0.002 30.2 8.3 99 146-257 27-144 (387)
219 3kuu_A Phosphoribosylaminoimid 47.6 39 0.0013 28.3 6.1 58 206-271 57-114 (174)
220 1cdo_A Alcohol dehydrogenase; 47.5 41 0.0014 30.7 7.0 49 96-156 194-242 (374)
221 3pk0_A Short-chain dehydrogena 47.4 1E+02 0.0035 26.3 9.4 32 97-129 12-43 (262)
222 3oow_A Phosphoribosylaminoimid 47.2 50 0.0017 27.4 6.7 58 206-271 50-107 (166)
223 3ors_A N5-carboxyaminoimidazol 47.2 45 0.0015 27.6 6.4 58 206-271 48-105 (163)
224 3l6u_A ABC-type sugar transpor 47.2 1.3E+02 0.0045 25.4 18.8 36 219-256 194-230 (293)
225 3trh_A Phosphoribosylaminoimid 47.0 35 0.0012 28.4 5.8 48 220-271 61-108 (169)
226 3i4f_A 3-oxoacyl-[acyl-carrier 46.9 1.2E+02 0.004 25.7 9.6 34 96-130 8-41 (264)
227 1yb5_A Quinone oxidoreductase; 46.8 28 0.00097 31.7 5.8 49 96-156 172-220 (351)
228 2b34_A F35G2.2, MAR1 ribonucle 46.5 15 0.00052 31.0 3.6 59 95-156 101-160 (199)
229 2jhf_A Alcohol dehydrogenase E 46.3 41 0.0014 30.7 6.9 49 96-156 193-241 (374)
230 4eyg_A Twin-arginine transloca 46.2 1.5E+02 0.0052 25.9 15.8 147 87-254 64-230 (368)
231 2fqx_A Membrane lipoprotein TM 46.1 1.6E+02 0.0053 26.0 16.5 154 86-257 54-226 (318)
232 2h6e_A ADH-4, D-arabinose 1-de 46.1 28 0.00095 31.5 5.6 48 96-156 172-221 (344)
233 1jvb_A NAD(H)-dependent alcoho 46.0 27 0.00092 31.6 5.5 49 96-156 172-221 (347)
234 3kv1_A Transcriptional repress 45.8 91 0.0031 27.4 8.8 51 224-275 57-113 (267)
235 1yqd_A Sinapyl alcohol dehydro 45.8 47 0.0016 30.3 7.2 48 96-156 189-237 (366)
236 2j8z_A Quinone oxidoreductase; 45.8 25 0.00084 32.0 5.2 49 96-156 164-212 (354)
237 3gaz_A Alcohol dehydrogenase s 45.8 23 0.00079 32.1 5.0 46 96-154 152-197 (343)
238 2j3h_A NADP-dependent oxidored 45.6 31 0.001 31.0 5.8 49 96-156 157-206 (345)
239 4dry_A 3-oxoacyl-[acyl-carrier 45.5 1E+02 0.0035 26.8 9.2 31 96-128 35-65 (281)
240 1zem_A Xylitol dehydrogenase; 45.4 1.2E+02 0.0041 25.8 9.5 30 97-128 10-39 (262)
241 4fgs_A Probable dehydrogenase 45.4 83 0.0028 27.8 8.5 32 94-127 29-60 (273)
242 3a28_C L-2.3-butanediol dehydr 45.4 1.4E+02 0.0048 25.2 11.2 29 98-128 6-34 (258)
243 3a11_A Translation initiation 45.4 41 0.0014 31.0 6.7 56 96-159 143-200 (338)
244 1vlj_A NADH-dependent butanol 45.3 1.4E+02 0.0048 27.8 10.5 99 146-257 37-153 (407)
245 3sx2_A Putative 3-ketoacyl-(ac 45.1 1.5E+02 0.005 25.4 13.4 32 96-129 15-46 (278)
246 1geg_A Acetoin reductase; SDR 45.0 1.3E+02 0.0045 25.4 9.7 29 98-128 6-34 (256)
247 1ja9_A 4HNR, 1,3,6,8-tetrahydr 45.0 1.4E+02 0.0048 25.2 10.7 56 97-159 23-78 (274)
248 3awd_A GOX2181, putative polyo 45.0 1.4E+02 0.0047 25.0 9.9 32 97-129 15-46 (260)
249 3ged_A Short-chain dehydrogena 45.0 1.1E+02 0.0037 26.6 9.1 50 97-158 4-53 (247)
250 3h75_A Periplasmic sugar-bindi 44.9 1.6E+02 0.0055 25.9 17.5 156 86-256 52-243 (350)
251 3rot_A ABC sugar transporter, 44.8 1.5E+02 0.005 25.4 19.2 200 84-308 51-268 (297)
252 3c85_A Putative glutathione-re 44.7 30 0.001 27.9 5.1 29 97-127 41-70 (183)
253 4ekn_B Aspartate carbamoyltran 44.3 40 0.0014 30.7 6.2 57 97-159 153-211 (306)
254 2rhc_B Actinorhodin polyketide 44.0 1.3E+02 0.0046 25.8 9.7 30 97-128 25-54 (277)
255 4ffl_A PYLC; amino acid, biosy 43.9 23 0.00077 32.3 4.6 31 96-128 2-32 (363)
256 3kvo_A Hydroxysteroid dehydrog 43.7 70 0.0024 29.1 8.0 77 144-229 62-138 (346)
257 1o98_A 2,3-bisphosphoglycerate 43.7 52 0.0018 32.2 7.4 51 81-131 95-154 (511)
258 3lp6_A Phosphoribosylaminoimid 43.7 44 0.0015 27.9 5.9 48 220-271 62-109 (174)
259 3rg8_A Phosphoribosylaminoimid 43.5 43 0.0015 27.6 5.7 47 220-271 58-104 (159)
260 1vj0_A Alcohol dehydrogenase, 43.5 33 0.0011 31.5 5.8 48 96-156 197-245 (380)
261 1v3u_A Leukotriene B4 12- hydr 43.5 35 0.0012 30.5 5.8 49 96-156 147-195 (333)
262 2hq1_A Glucose/ribitol dehydro 43.5 1.4E+02 0.0048 24.7 11.8 55 97-158 7-61 (247)
263 3ve9_A Orotidine-5'-phosphate 43.3 76 0.0026 27.1 7.7 86 83-180 117-202 (215)
264 3e3m_A Transcriptional regulat 43.3 1.7E+02 0.006 25.8 18.8 35 219-255 249-287 (355)
265 1yzv_A Hypothetical protein; s 43.2 10 0.00034 32.4 1.9 62 91-155 106-171 (204)
266 3cxt_A Dehydrogenase with diff 43.2 1.5E+02 0.0051 25.9 9.9 30 97-128 37-66 (291)
267 1x13_A NAD(P) transhydrogenase 43.1 37 0.0013 31.9 6.1 47 96-155 173-219 (401)
268 3egc_A Putative ribose operon 43.0 1.5E+02 0.0052 25.0 19.4 36 219-256 185-224 (291)
269 2fzw_A Alcohol dehydrogenase c 42.6 31 0.0011 31.5 5.4 49 96-156 192-240 (373)
270 3k31_A Enoyl-(acyl-carrier-pro 42.6 1.7E+02 0.0058 25.5 10.7 33 96-129 32-65 (296)
271 4ei7_A Plasmid replication pro 42.6 38 0.0013 31.9 6.0 69 220-290 111-188 (389)
272 3e03_A Short chain dehydrogena 42.5 1.1E+02 0.0037 26.4 8.8 11 246-256 185-195 (274)
273 1f8f_A Benzyl alcohol dehydrog 42.3 31 0.0011 31.5 5.3 50 96-157 192-241 (371)
274 3h7a_A Short chain dehydrogena 42.2 1.6E+02 0.0054 25.0 10.0 72 97-181 10-81 (252)
275 3ox4_A Alcohol dehydrogenase 2 42.1 47 0.0016 30.9 6.6 97 148-257 27-140 (383)
276 3tsc_A Putative oxidoreductase 41.9 1.7E+02 0.0056 25.1 13.4 30 97-128 14-43 (277)
277 4fn4_A Short chain dehydrogena 41.8 54 0.0019 28.7 6.6 35 91-127 28-62 (254)
278 3o38_A Short chain dehydrogena 41.8 1.5E+02 0.0051 25.1 9.5 33 97-129 24-56 (266)
279 1fmc_A 7 alpha-hydroxysteroid 41.6 1.5E+02 0.0052 24.6 9.8 31 97-128 13-43 (255)
280 4gqb_A Protein arginine N-meth 41.3 19 0.00065 36.3 3.9 36 223-258 361-396 (637)
281 1qor_A Quinone oxidoreductase; 41.2 29 0.001 31.0 4.9 49 96-156 142-190 (327)
282 1iy8_A Levodione reductase; ox 41.0 1.7E+02 0.0057 24.9 9.8 30 97-128 16-45 (267)
283 1yb1_A 17-beta-hydroxysteroid 40.8 1.6E+02 0.0055 25.1 9.7 32 97-129 33-64 (272)
284 2eih_A Alcohol dehydrogenase; 40.5 25 0.00085 31.8 4.3 49 96-156 168-216 (343)
285 1c1d_A L-phenylalanine dehydro 40.2 82 0.0028 29.2 7.9 47 80-129 154-206 (355)
286 3e8x_A Putative NAD-dependent 40.2 73 0.0025 26.5 7.1 32 97-129 23-54 (236)
287 2q5c_A NTRC family transcripti 40.0 41 0.0014 28.2 5.3 38 84-129 132-169 (196)
288 3irv_A Cysteine hydrolase; str 39.9 44 0.0015 28.8 5.7 62 60-131 113-175 (233)
289 2p91_A Enoyl-[acyl-carrier-pro 39.9 1.8E+02 0.0062 25.0 10.8 33 97-129 23-56 (285)
290 1wly_A CAAR, 2-haloacrylate re 39.9 26 0.00088 31.5 4.3 49 96-156 147-195 (333)
291 2d8a_A PH0655, probable L-thre 39.8 26 0.0009 31.7 4.4 48 96-156 169-217 (348)
292 2qq5_A DHRS1, dehydrogenase/re 39.8 1.5E+02 0.0051 25.1 9.2 31 97-128 7-37 (260)
293 2zb4_A Prostaglandin reductase 39.8 44 0.0015 30.2 5.9 49 96-156 162-212 (357)
294 3svt_A Short-chain type dehydr 39.7 1.4E+02 0.0047 25.7 9.1 31 96-128 13-43 (281)
295 3ai3_A NADPH-sorbose reductase 39.5 1.7E+02 0.0059 24.6 9.9 30 97-128 10-39 (263)
296 3f4w_A Putative hexulose 6 pho 39.2 73 0.0025 26.3 6.8 67 85-159 68-135 (211)
297 4dvj_A Putative zinc-dependent 39.1 34 0.0011 31.3 5.0 48 97-156 174-222 (363)
298 3nav_A Tryptophan synthase alp 39.1 2E+02 0.007 25.3 12.1 70 78-155 79-154 (271)
299 3h7a_A Short chain dehydrogena 38.8 79 0.0027 26.9 7.2 71 144-231 24-94 (252)
300 1ae1_A Tropinone reductase-I; 38.6 1.7E+02 0.0059 25.0 9.5 30 97-128 24-53 (273)
301 2cul_A Glucose-inhibited divis 38.4 29 0.00098 29.4 4.2 30 98-129 6-35 (232)
302 2x7x_A Sensor protein; transfe 38.3 2E+02 0.0068 25.0 14.8 160 86-257 54-225 (325)
303 3i6i_A Putative leucoanthocyan 37.9 2.1E+02 0.0072 25.2 11.1 32 98-130 13-44 (346)
304 1xkq_A Short-chain reductase f 37.8 1.6E+02 0.0056 25.2 9.2 31 97-128 8-38 (280)
305 2okg_A Central glycolytic gene 37.2 1.8E+02 0.0061 25.2 9.3 95 174-275 12-114 (255)
306 2zat_A Dehydrogenase/reductase 37.1 1.9E+02 0.0064 24.4 9.9 31 97-128 16-46 (260)
307 2h4a_A YRAM (HI1655); perplasm 37.1 2.3E+02 0.0078 25.3 12.9 38 219-257 174-211 (325)
308 3i09_A Periplasmic branched-ch 37.0 2.2E+02 0.0075 25.1 14.5 146 87-253 63-229 (375)
309 1xhl_A Short-chain dehydrogena 36.8 1.9E+02 0.0064 25.3 9.5 31 97-128 28-58 (297)
310 2fep_A Catabolite control prot 36.8 2E+02 0.0067 24.5 20.9 36 219-256 194-233 (289)
311 3ic5_A Putative saccharopine d 36.7 66 0.0023 23.2 5.6 30 97-128 7-37 (118)
312 2ywl_A Thioredoxin reductase r 36.7 44 0.0015 26.6 4.9 31 98-130 4-34 (180)
313 1edo_A Beta-keto acyl carrier 36.6 1.8E+02 0.0061 24.0 11.2 29 98-127 4-32 (244)
314 2bm8_A Cephalosporin hydroxyla 36.6 44 0.0015 28.5 5.1 38 222-259 84-121 (236)
315 4gwg_A 6-phosphogluconate dehy 36.6 1.3E+02 0.0046 28.9 9.0 29 98-128 7-35 (484)
316 3lqy_A Putative isochorismatas 36.5 50 0.0017 27.3 5.3 41 91-131 109-149 (190)
317 1gee_A Glucose 1-dehydrogenase 36.5 1.9E+02 0.0064 24.2 11.7 55 97-158 9-63 (261)
318 4imr_A 3-oxoacyl-(acyl-carrier 36.4 2.1E+02 0.007 24.6 10.0 56 96-159 34-89 (275)
319 3l77_A Short-chain alcohol deh 36.3 1.3E+02 0.0046 24.8 8.1 31 97-129 5-35 (235)
320 3o26_A Salutaridine reductase; 36.3 1.8E+02 0.0062 24.8 9.3 39 184-231 63-102 (311)
321 3clk_A Transcription regulator 36.2 2E+02 0.0068 24.3 18.4 36 219-256 184-223 (290)
322 3oqp_A Putative isochorismatas 36.1 51 0.0017 28.0 5.3 40 91-131 105-145 (211)
323 3brq_A HTH-type transcriptiona 36.1 1.9E+02 0.0066 24.2 20.7 37 219-257 199-239 (296)
324 3r3s_A Oxidoreductase; structu 36.0 2.2E+02 0.0074 24.7 10.6 31 96-128 51-81 (294)
325 3f1l_A Uncharacterized oxidore 35.9 1.7E+02 0.0057 24.7 8.8 31 96-128 14-44 (252)
326 4eqs_A Coenzyme A disulfide re 35.7 1.6E+02 0.0053 27.5 9.3 60 95-156 147-207 (437)
327 2ph3_A 3-oxoacyl-[acyl carrier 35.6 1.8E+02 0.0063 23.9 12.0 30 97-127 3-32 (245)
328 3lyl_A 3-oxoacyl-(acyl-carrier 35.6 1.4E+02 0.0047 24.9 8.2 39 87-127 22-60 (247)
329 3d4o_A Dipicolinate synthase s 35.6 62 0.0021 28.6 6.1 64 78-154 133-201 (293)
330 4eez_A Alcohol dehydrogenase 1 35.5 96 0.0033 27.6 7.5 50 96-158 165-215 (348)
331 1wma_A Carbonyl reductase [NAD 35.5 1.9E+02 0.0064 24.1 9.1 32 97-129 6-38 (276)
332 3i1j_A Oxidoreductase, short c 35.3 1.9E+02 0.0066 23.9 10.0 31 97-128 16-46 (247)
333 3csu_A Protein (aspartate carb 35.1 57 0.002 29.7 5.8 56 97-158 156-213 (310)
334 3mcw_A Putative hydrolase; iso 35.0 56 0.0019 27.2 5.4 62 60-131 87-149 (198)
335 3rih_A Short chain dehydrogena 35.0 1.7E+02 0.0059 25.6 9.0 32 97-129 43-74 (293)
336 3v2h_A D-beta-hydroxybutyrate 34.7 2.2E+02 0.0076 24.5 10.2 30 97-128 28-57 (281)
337 4dbe_A Orotidine 5'-phosphate 34.6 89 0.003 26.8 6.7 10 150-159 179-188 (222)
338 3sc4_A Short chain dehydrogena 34.5 1.6E+02 0.0054 25.5 8.6 11 246-256 187-197 (285)
339 4fe7_A Xylose operon regulator 34.2 97 0.0033 28.4 7.4 37 219-257 202-242 (412)
340 1x1t_A D(-)-3-hydroxybutyrate 34.1 2.1E+02 0.0072 24.1 10.5 31 97-128 6-36 (260)
341 3ecs_A Translation initiation 34.0 66 0.0023 29.4 6.0 57 96-160 123-181 (315)
342 2rgy_A Transcriptional regulat 34.0 2.2E+02 0.0074 24.1 19.2 156 86-257 59-228 (290)
343 4fc7_A Peroxisomal 2,4-dienoyl 33.8 2.2E+02 0.0077 24.3 9.7 32 96-129 29-60 (277)
344 4a5l_A Thioredoxin reductase; 33.7 31 0.0011 30.0 3.7 27 98-126 7-33 (314)
345 3p2y_A Alanine dehydrogenase/p 33.6 60 0.0021 30.5 5.8 48 96-156 185-232 (381)
346 3afn_B Carbonyl reductase; alp 33.4 1.8E+02 0.0062 24.1 8.6 55 97-158 9-63 (258)
347 3icc_A Putative 3-oxoacyl-(acy 33.4 1.7E+02 0.0059 24.3 8.5 56 97-159 9-64 (255)
348 3ntd_A FAD-dependent pyridine 33.4 1.5E+02 0.0051 28.3 8.9 60 95-156 151-211 (565)
349 2q2v_A Beta-D-hydroxybutyrate 33.1 1.7E+02 0.0058 24.6 8.4 53 97-159 6-58 (255)
350 4h17_A Hydrolase, isochorismat 33.1 62 0.0021 27.0 5.3 40 91-131 119-159 (197)
351 3nyw_A Putative oxidoreductase 33.1 1.8E+02 0.006 24.6 8.5 31 96-128 9-39 (250)
352 2r5f_A Transcriptional regulat 33.1 1.6E+02 0.0054 25.7 8.3 27 225-251 60-90 (264)
353 1vl8_A Gluconate 5-dehydrogena 33.0 2.3E+02 0.0078 24.1 9.9 30 98-129 25-54 (267)
354 1vp8_A Hypothetical protein AF 33.0 1.3E+02 0.0045 25.6 7.2 57 185-255 18-74 (201)
355 3rss_A Putative uncharacterize 33.0 70 0.0024 31.1 6.4 54 97-155 55-110 (502)
356 3awd_A GOX2181, putative polyo 32.9 1E+02 0.0034 25.9 6.8 12 246-257 186-197 (260)
357 2hqb_A Transcriptional activat 32.9 58 0.002 28.5 5.4 33 220-256 181-213 (296)
358 3orq_A N5-carboxyaminoimidazol 32.8 50 0.0017 30.3 5.1 32 96-129 13-44 (377)
359 4gcm_A TRXR, thioredoxin reduc 32.7 38 0.0013 29.6 4.2 28 96-126 8-35 (312)
360 1mxh_A Pteridine reductase 2; 32.6 2.3E+02 0.0078 24.0 9.7 31 97-128 13-43 (276)
361 2pd4_A Enoyl-[acyl-carrier-pro 32.5 2.3E+02 0.0079 24.1 9.9 32 97-129 9-41 (275)
362 3oj0_A Glutr, glutamyl-tRNA re 32.4 56 0.0019 25.2 4.7 30 95-127 21-50 (144)
363 3dme_A Conserved exported prot 32.3 42 0.0014 29.7 4.4 30 98-129 7-36 (369)
364 1ml4_A Aspartate transcarbamoy 32.2 45 0.0015 30.4 4.6 56 97-158 157-213 (308)
365 3h5t_A Transcriptional regulat 32.2 2.6E+02 0.009 24.6 16.3 36 219-256 267-306 (366)
366 2oln_A NIKD protein; flavoprot 32.2 38 0.0013 30.8 4.2 29 98-128 7-35 (397)
367 2rir_A Dipicolinate synthase, 32.1 76 0.0026 28.1 6.1 31 96-128 158-188 (300)
368 3zen_D Fatty acid synthase; tr 32.1 7.5E+02 0.026 29.8 15.5 34 96-129 2137-2170(3089)
369 3m6i_A L-arabinitol 4-dehydrog 31.9 55 0.0019 29.6 5.2 48 96-155 181-228 (363)
370 3g1w_A Sugar ABC transporter; 31.8 2.4E+02 0.0081 23.9 20.5 198 85-307 52-263 (305)
371 3tfo_A Putative 3-oxoacyl-(acy 31.7 2.5E+02 0.0084 24.1 15.5 39 87-127 21-59 (264)
372 2a0u_A Initiation factor 2B; S 31.5 99 0.0034 29.0 6.9 59 96-160 179-246 (383)
373 1t5o_A EIF2BD, translation ini 31.4 1.1E+02 0.0039 28.2 7.3 45 109-159 167-214 (351)
374 3gxh_A Putative phosphatase (D 31.3 1.9E+02 0.0065 22.7 9.5 45 178-230 63-107 (157)
375 3gaf_A 7-alpha-hydroxysteroid 31.3 85 0.0029 26.8 6.1 38 88-127 30-67 (256)
376 3tfx_A Orotidine 5'-phosphate 31.2 1.1E+02 0.0038 27.0 6.9 87 85-178 148-236 (259)
377 1pvv_A Otcase, ornithine carba 31.1 1.1E+02 0.0038 27.8 7.0 34 97-131 157-190 (315)
378 3afn_B Carbonyl reductase; alp 31.0 2.2E+02 0.0076 23.5 8.8 11 247-257 186-196 (258)
379 3ru6_A Orotidine 5'-phosphate 31.0 1.7E+02 0.0058 26.5 8.2 85 87-178 164-250 (303)
380 4hb9_A Similarities with proba 31.0 46 0.0016 29.9 4.5 28 97-126 3-30 (412)
381 3ce6_A Adenosylhomocysteinase; 30.9 1.2E+02 0.0039 29.5 7.5 46 96-154 275-320 (494)
382 3oz2_A Digeranylgeranylglycero 30.9 42 0.0014 29.9 4.2 28 96-126 6-33 (397)
383 3qiv_A Short-chain dehydrogena 30.9 1.2E+02 0.0042 25.4 7.1 39 87-127 26-64 (253)
384 3hs3_A Ribose operon repressor 30.9 1.4E+02 0.0049 25.2 7.6 36 219-256 177-216 (277)
385 3d8u_A PURR transcriptional re 30.9 2.3E+02 0.0079 23.5 17.7 156 85-255 50-218 (275)
386 3grk_A Enoyl-(acyl-carrier-pro 30.9 2.3E+02 0.0078 24.6 9.1 33 94-128 31-65 (293)
387 1t9k_A Probable methylthioribo 30.9 1.1E+02 0.0037 28.3 7.0 59 96-160 150-217 (347)
388 2pju_A Propionate catabolism o 30.8 60 0.0021 28.0 5.0 37 83-127 143-179 (225)
389 4dio_A NAD(P) transhydrogenase 30.8 87 0.003 29.6 6.4 48 96-156 191-238 (405)
390 3d3j_A Enhancer of mRNA-decapp 30.8 1.3E+02 0.0044 27.2 7.4 53 98-154 136-190 (306)
391 3imf_A Short chain dehydrogena 30.7 86 0.0029 26.7 6.0 10 247-256 179-188 (257)
392 4fk1_A Putative thioredoxin re 30.6 44 0.0015 29.2 4.2 28 96-126 8-35 (304)
393 2o23_A HADH2 protein; HSD17B10 30.5 1.4E+02 0.0049 25.0 7.5 32 97-129 14-45 (265)
394 3q2o_A Phosphoribosylaminoimid 30.2 56 0.0019 30.0 5.0 31 97-129 16-46 (389)
395 3n0w_A ABC branched chain amin 30.1 2.9E+02 0.0098 24.4 17.1 142 87-249 65-225 (379)
396 3sju_A Keto reductase; short-c 29.9 1.1E+02 0.0039 26.4 6.8 39 87-127 41-79 (279)
397 1duv_G Octase-1, ornithine tra 29.8 1.1E+02 0.0038 28.1 6.8 56 97-158 157-216 (333)
398 3v3t_A Cell division GTPase FT 29.8 1.7E+02 0.0057 27.3 8.0 38 220-257 88-130 (360)
399 3vnd_A TSA, tryptophan synthas 29.8 2.9E+02 0.0098 24.3 10.9 70 78-155 77-152 (267)
400 1vb5_A Translation initiation 29.7 1.1E+02 0.0037 27.1 6.7 57 96-160 111-169 (276)
401 3kl2_A Putative isochorismatas 29.6 75 0.0026 27.1 5.4 52 76-131 135-187 (226)
402 3o1i_D Periplasmic protein TOR 29.6 2.5E+02 0.0087 23.6 20.6 32 219-253 193-226 (304)
403 4e1o_A HDC, histidine decarbox 29.4 1.9E+02 0.0064 27.2 8.7 55 97-159 148-217 (481)
404 3lf2_A Short chain oxidoreduct 29.4 2.6E+02 0.0089 23.6 9.8 30 97-128 11-40 (265)
405 4dgk_A Phytoene dehydrogenase; 29.4 47 0.0016 31.2 4.4 28 97-126 3-30 (501)
406 1pg5_A Aspartate carbamoyltran 29.4 58 0.002 29.5 4.8 53 97-158 151-205 (299)
407 1xah_A Sadhqs, 3-dehydroquinat 29.3 82 0.0028 28.8 5.9 48 204-257 75-126 (354)
408 1jye_A Lactose operon represso 29.3 1.4E+02 0.0047 26.4 7.4 37 219-257 237-277 (349)
409 3alj_A 2-methyl-3-hydroxypyrid 29.1 51 0.0018 29.8 4.5 30 97-128 13-42 (379)
410 1ryi_A Glycine oxidase; flavop 28.9 51 0.0017 29.6 4.4 29 98-128 20-48 (382)
411 3tpc_A Short chain alcohol deh 28.8 1.2E+02 0.0042 25.5 6.7 32 97-130 10-41 (257)
412 1fmc_A 7 alpha-hydroxysteroid 28.8 2.5E+02 0.0085 23.2 12.2 12 246-257 180-191 (255)
413 1jzt_A Hypothetical 27.5 kDa p 28.7 1E+02 0.0036 26.8 6.2 55 97-155 61-117 (246)
414 2hmt_A YUAA protein; RCK, KTN, 28.7 53 0.0018 24.7 3.9 29 97-127 8-36 (144)
415 2a67_A Isochorismatase family 28.6 65 0.0022 26.0 4.6 40 91-131 97-137 (167)
416 2wyu_A Enoyl-[acyl carrier pro 28.6 2.6E+02 0.009 23.5 10.4 32 97-129 11-43 (261)
417 1w6u_A 2,4-dienoyl-COA reducta 28.6 2.8E+02 0.0095 23.7 9.6 30 97-128 29-58 (302)
418 2c07_A 3-oxoacyl-(acyl-carrier 28.5 2.4E+02 0.0082 24.1 8.7 30 97-127 46-75 (285)
419 3rih_A Short chain dehydrogena 28.5 1.6E+02 0.0056 25.7 7.7 12 246-257 213-224 (293)
420 2b4q_A Rhamnolipids biosynthes 28.5 2.3E+02 0.008 24.2 8.6 29 97-127 32-60 (276)
421 3rp8_A Flavoprotein monooxygen 28.5 53 0.0018 30.0 4.5 29 98-128 26-54 (407)
422 3ioy_A Short-chain dehydrogena 28.4 2.2E+02 0.0074 25.2 8.5 31 97-129 11-41 (319)
423 3ged_A Short-chain dehydrogena 28.4 1.5E+02 0.0052 25.6 7.2 14 244-257 164-177 (247)
424 3jvd_A Transcriptional regulat 28.2 2.6E+02 0.009 24.4 9.1 34 221-256 232-269 (333)
425 1xq1_A Putative tropinone redu 28.2 2.6E+02 0.009 23.3 10.0 31 97-128 16-46 (266)
426 4dyv_A Short-chain dehydrogena 28.0 2.8E+02 0.0097 23.7 9.5 30 96-126 29-58 (272)
427 4g81_D Putative hexonate dehyd 28.0 1.2E+02 0.0039 26.5 6.4 36 90-127 29-64 (255)
428 2x3n_A Probable FAD-dependent 28.0 53 0.0018 29.8 4.4 29 98-128 9-37 (399)
429 1yvv_A Amine oxidase, flavin-c 28.0 51 0.0017 28.9 4.2 28 98-127 5-32 (336)
430 2ew8_A (S)-1-phenylethanol deh 27.9 1.8E+02 0.0061 24.4 7.6 51 97-158 10-60 (249)
431 3ka7_A Oxidoreductase; structu 27.9 58 0.002 29.7 4.6 28 98-127 3-30 (425)
432 4at0_A 3-ketosteroid-delta4-5a 27.8 48 0.0016 31.8 4.2 27 98-126 44-70 (510)
433 1e7w_A Pteridine reductase; di 27.7 2.9E+02 0.01 23.7 9.4 30 97-127 11-40 (291)
434 3tjr_A Short chain dehydrogena 27.7 1.2E+02 0.0041 26.5 6.6 40 86-127 47-86 (301)
435 4e6p_A Probable sorbitol dehyd 27.7 2.7E+02 0.0093 23.4 9.0 29 97-127 11-39 (259)
436 3cgv_A Geranylgeranyl reductas 27.5 51 0.0018 29.6 4.2 30 98-129 7-36 (397)
437 2i6u_A Otcase, ornithine carba 27.5 1.3E+02 0.0043 27.3 6.7 35 97-131 150-184 (307)
438 1vlv_A Otcase, ornithine carba 27.4 1.1E+02 0.0037 28.0 6.3 35 97-131 169-203 (325)
439 2uzz_A N-methyl-L-tryptophan o 27.4 59 0.002 29.0 4.5 29 98-128 5-33 (372)
440 3fbs_A Oxidoreductase; structu 27.3 59 0.002 27.7 4.4 29 98-128 5-33 (297)
441 3q9t_A Choline dehydrogenase a 27.3 34 0.0012 33.8 3.0 36 219-258 5-41 (577)
442 3nix_A Flavoprotein/dehydrogen 26.8 51 0.0018 30.0 4.1 30 98-129 8-37 (421)
443 1ebd_A E3BD, dihydrolipoamide 26.8 1.2E+02 0.0043 28.1 6.9 34 96-131 171-204 (455)
444 1dxh_A Ornithine carbamoyltran 26.8 1.1E+02 0.0038 28.1 6.3 35 97-131 157-191 (335)
445 2qhx_A Pteridine reductase 1; 26.6 3.3E+02 0.011 24.1 9.5 30 97-127 48-77 (328)
446 4e4t_A Phosphoribosylaminoimid 26.6 62 0.0021 30.4 4.6 31 96-128 36-66 (419)
447 4fgs_A Probable dehydrogenase 26.6 82 0.0028 27.9 5.2 33 90-127 49-81 (273)
448 1ofu_A FTSZ, cell division pro 26.6 1.5E+02 0.0052 26.9 7.1 70 220-291 95-170 (320)
449 1w5f_A Cell division protein F 26.4 1.2E+02 0.0039 28.2 6.3 68 220-289 105-178 (353)
450 2vdc_G Glutamate synthase [NAD 26.4 1.3E+02 0.0045 28.4 7.0 56 96-156 265-321 (456)
451 3uhj_A Probable glycerol dehyd 26.3 2.1E+02 0.0073 26.4 8.3 91 145-255 46-138 (387)
452 2wm3_A NMRA-like family domain 26.3 1.6E+02 0.0056 25.2 7.2 33 97-130 7-40 (299)
453 3ezl_A Acetoacetyl-COA reducta 26.3 2.4E+02 0.0082 23.5 8.1 71 144-229 30-100 (256)
454 2gf3_A MSOX, monomeric sarcosi 26.2 61 0.0021 29.1 4.4 29 98-128 6-34 (389)
455 3k40_A Aromatic-L-amino-acid d 26.1 1.8E+02 0.0061 27.4 7.9 55 97-159 142-211 (475)
456 1sny_A Sniffer CG10964-PA; alp 26.1 2.5E+02 0.0087 23.4 8.3 33 97-130 23-58 (267)
457 1y56_B Sarcosine oxidase; dehy 26.1 57 0.0019 29.3 4.2 30 96-128 7-36 (382)
458 3ucx_A Short chain dehydrogena 26.1 2.1E+02 0.0072 24.2 7.8 13 246-258 181-193 (264)
459 3rku_A Oxidoreductase YMR226C; 25.9 2.4E+02 0.0083 24.4 8.3 33 93-127 32-67 (287)
460 2rhc_B Actinorhodin polyketide 25.9 1.2E+02 0.0043 26.0 6.3 12 246-257 194-205 (277)
461 3d3k_A Enhancer of mRNA-decapp 25.9 1.3E+02 0.0043 26.5 6.3 53 98-154 89-143 (259)
462 2yvk_A Methylthioribose-1-phos 25.9 1.1E+02 0.0038 28.5 6.2 45 109-159 194-241 (374)
463 3lzw_A Ferredoxin--NADP reduct 25.8 64 0.0022 28.0 4.4 30 98-129 10-39 (332)
464 3eod_A Protein HNR; response r 25.8 1.9E+02 0.0064 20.8 6.6 42 219-260 50-92 (130)
465 3ihm_A Styrene monooxygenase A 25.7 70 0.0024 29.7 4.9 32 97-130 24-55 (430)
466 3k7y_A Aspartate aminotransfer 25.7 2.5E+02 0.0086 25.8 8.7 49 98-159 101-151 (405)
467 3tha_A Tryptophan synthase alp 25.6 3.4E+02 0.012 23.7 11.2 17 112-128 108-124 (252)
468 3bbl_A Regulatory protein of L 25.6 3E+02 0.01 23.1 18.4 36 220-257 188-227 (287)
469 3k5i_A Phosphoribosyl-aminoimi 25.6 61 0.0021 30.1 4.4 30 96-127 25-54 (403)
470 3i45_A Twin-arginine transloca 25.6 3.5E+02 0.012 23.9 13.4 142 93-255 72-235 (387)
471 1c0p_A D-amino acid oxidase; a 25.5 66 0.0022 28.8 4.5 28 98-127 9-36 (363)
472 3dje_A Fructosyl amine: oxygen 25.5 57 0.002 30.0 4.2 30 96-128 8-38 (438)
473 1zem_A Xylitol dehydrogenase; 25.5 1.5E+02 0.0052 25.1 6.7 12 246-257 178-189 (262)
474 2jah_A Clavulanic acid dehydro 25.4 1.5E+02 0.0052 24.9 6.7 12 246-257 176-187 (247)
475 3oig_A Enoyl-[acyl-carrier-pro 25.4 3E+02 0.01 23.1 9.3 31 97-129 10-42 (266)
476 1k0i_A P-hydroxybenzoate hydro 25.4 54 0.0018 29.7 3.9 29 98-128 5-33 (394)
477 2we8_A Xanthine dehydrogenase; 25.4 59 0.002 30.5 4.2 32 96-129 205-236 (386)
478 2vou_A 2,6-dihydroxypyridine h 25.3 65 0.0022 29.3 4.5 30 97-128 7-36 (397)
479 3o26_A Salutaridine reductase; 25.3 3.1E+02 0.011 23.2 15.9 33 97-130 14-46 (311)
480 4e7p_A Response regulator; DNA 25.2 2.1E+02 0.0073 21.3 7.2 43 219-261 65-108 (150)
481 2cfc_A 2-(R)-hydroxypropyl-COM 25.2 2.6E+02 0.0087 23.1 8.1 29 98-128 6-34 (250)
482 3itj_A Thioredoxin reductase 1 25.1 58 0.002 28.4 3.9 30 97-128 24-53 (338)
483 1e0t_A Pyruvate kinase, PK; ph 25.1 3.7E+02 0.013 25.8 9.8 130 111-256 262-402 (470)
484 3ado_A Lambda-crystallin; L-gu 25.1 70 0.0024 29.1 4.5 67 206-275 103-181 (319)
485 3qvp_A Glucose oxidase; oxidor 25.1 41 0.0014 33.3 3.2 35 219-257 18-53 (583)
486 2rgh_A Alpha-glycerophosphate 25.1 1E+02 0.0035 30.0 6.1 32 93-127 31-62 (571)
487 3f8d_A Thioredoxin reductase ( 25.0 68 0.0023 27.6 4.4 30 97-128 17-46 (323)
488 3pk0_A Short-chain dehydrogena 25.0 1.5E+02 0.0053 25.1 6.7 12 246-257 182-193 (262)
489 4egf_A L-xylulose reductase; s 25.0 1.5E+02 0.0052 25.2 6.7 12 246-257 192-203 (266)
490 4e12_A Diketoreductase; oxidor 24.9 75 0.0026 27.8 4.6 30 96-127 5-34 (283)
491 2i0z_A NAD(FAD)-utilizing dehy 24.9 59 0.002 30.5 4.2 30 95-127 27-56 (447)
492 2xdo_A TETX2 protein; tetracyc 24.9 60 0.0021 29.6 4.2 31 97-129 28-58 (398)
493 3rwb_A TPLDH, pyridoxal 4-dehy 24.9 3E+02 0.01 22.9 9.6 28 97-126 9-36 (247)
494 1v59_A Dihydrolipoamide dehydr 24.9 1.2E+02 0.0041 28.4 6.4 34 96-131 184-217 (478)
495 4a9w_A Monooxygenase; baeyer-v 24.9 68 0.0023 28.0 4.4 30 98-129 6-35 (357)
496 3v8b_A Putative dehydrogenase, 24.8 1.3E+02 0.0045 26.0 6.3 12 246-257 201-212 (283)
497 2i2c_A Probable inorganic poly 24.7 75 0.0026 27.9 4.6 40 221-262 36-75 (272)
498 1geg_A Acetoin reductase; SDR 24.6 2.8E+02 0.0095 23.2 8.2 12 246-257 173-184 (256)
499 3nrn_A Uncharacterized protein 24.5 73 0.0025 29.2 4.6 27 98-126 3-29 (421)
500 1vb5_A Translation initiation 24.4 2.2E+02 0.0075 25.1 7.6 14 176-189 154-167 (276)
No 1
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=100.00 E-value=3.2e-48 Score=366.64 Aligned_cols=256 Identities=37% Similarity=0.596 Sum_probs=215.6
Q ss_pred CCCChhhhcCCCCcCcccCCCCCCCccccCCCCCCC--CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEec
Q 021235 24 APPSWASHLAPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITI 101 (315)
Q Consensus 24 ~~p~~~~~l~~~p~~r~~~~~~~TPL~~~~~~~L~~--g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~ 101 (315)
+||+|++.|..++ ++.+.+++|||++ +++|++ |++||+||||+||+.+||||+|++.+++.+|+++|.++||++
T Consensus 1 ~~~~~~~~l~~~~--~i~~~~~~TPL~~--~~~l~~~~g~~i~~K~E~~~p~~~gs~K~R~~~~~i~~a~~~G~~~vv~~ 76 (325)
T 1j0a_A 1 MHPKIFALLAKFP--RVELIPWETPIQY--LPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGADVVITV 76 (325)
T ss_dssp CCHHHHHHHTTCC--CCCCCCSCCCEEE--CHHHHHHHTSEEEEEEGGGSCSTTCSTHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCchhhhhhccCC--CcccccCCCCceE--hhhhhhhhCCEEEEEecccCCCCCCchHHHHHHHHHHHHHHcCCCEEEEc
Confidence 5899999999999 7889999999999 777765 899999999999955699999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHcCCeEEEEecCCC-cccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHH
Q 021235 102 GGIQSNHCRAAAVAAKYLNLDCYLILRTSK-VLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLK 180 (315)
Q Consensus 102 g~s~GNhg~alA~aa~~lGl~~~ivvp~~~-~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~ 180 (315)
|+|+||||+|+|++|+++|++|++|||+.. + ..|+.+++.|||+|++++.. ++.. ..+...+.++++.+
T Consensus 77 G~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~--------~~k~~~~~~~GA~v~~~~~~-~~~~-~~~~~~~~a~~l~~ 146 (325)
T 1j0a_A 77 GAVHSNHAFVTGLAAKKLGLDAILVLRGKEEL--------KGNYLLDKIMGIETRVYDAK-DSFE-LMKYAEEIAEELKR 146 (325)
T ss_dssp CCTTCHHHHHHHHHHHHTTCEEEEEEESCCCS--------CHHHHHHHHTTCEEEEESCC-STTT-HHHHHHHHHHHHTT
T ss_pred CCcchHHHHHHHHHHHHhCCcEEEEECCCCCC--------CchHHHHHHCCCEEEEeCcc-hhhh-hhHHHHHHHHHHHH
Confidence 889999999999999999999999999977 4 35899999999999999874 3321 00112334556666
Q ss_pred hCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCch
Q 021235 181 EGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPD 260 (315)
Q Consensus 181 ~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~ 260 (315)
+.+..|++|+++.|+.+.+||.+++.||++|+. .++|+||+|+|||||++|++.++|+.++++||+||++.+++.
T Consensus 147 ~~~~~~~~p~~~~n~~~~~g~~t~~~Ei~~q~~-----~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~~~~~~ 221 (325)
T 1j0a_A 147 EGRKPYVIPPGGASPIGTLGYVRAVGEIATQSE-----VKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGE 221 (325)
T ss_dssp SSCCEEEECGGGCSHHHHTHHHHHHHHHHHHCC-----CCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEECSSCSS
T ss_pred cCCceEEEcCCCCCHHHHHHHHHHHHHHHHhhC-----CCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEecCchH
Confidence 555568999999999999999999999999984 469999999999999999999999999999999999999988
Q ss_pred hhHHHHHHHHhh----hcC---------CCCCCCeEEecCCcccchHHHHHH
Q 021235 261 YFYDYTQGLLDG----LNA---------GVDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 261 ~~~~~i~~l~~g----~~~---------~~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
+....+..++++ ++. ....|+ +.|+|.+...++..+..
T Consensus 222 ~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~-~~v~d~e~~~a~~~l~~ 272 (325)
T 1j0a_A 222 VMTSKLDNLIKEAAELLGVKVEVRPELYDYSFGE-YGKITGEVAQIIRKVGT 272 (325)
T ss_dssp SHHHHHHHHHHHHHHHTTCCCCSCCEEEECSTTS-TTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcEEecCcccC-CCCCCHHHHHHHHHHHH
Confidence 776665555443 331 124577 88888888888777764
No 2
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=100.00 E-value=1.3e-46 Score=358.30 Aligned_cols=263 Identities=33% Similarity=0.446 Sum_probs=217.1
Q ss_pred CChhhhcCCCCcCcccCCCCCCCccccCCCCCCC--CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEecCC
Q 021235 26 PSWASHLAPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGG 103 (315)
Q Consensus 26 p~~~~~l~~~p~~r~~~~~~~TPL~~~~~~~L~~--g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~ 103 (315)
|+....+...+ |+.+.+++|||++ +++|++ |++||+||||+||+.+||||+|++.+++.+|+++|.++||++||
T Consensus 14 ~~~~~~~~a~~--ri~~~~~~TPL~~--~~~l~~~~g~~v~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~G~~~vv~~s~ 89 (342)
T 4d9b_A 14 SMPLHHLTRFP--RLEFIGAPTPLEY--LPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGADTLITAGA 89 (342)
T ss_dssp -CTTGGGGGSC--CCCSSCSCCCEEE--CHHHHHHHTSCEEEEEGGGCSSTTCCTHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCCcchhccCC--cccccCCCCceeE--hhhhHHhhCCEEEEEeCCCCCCCCcchHHHhHHHHHHHHHHcCCCEEEEcCC
Confidence 44555677778 8899999999999 788866 89999999999996679999999999999999999999999887
Q ss_pred chhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCC
Q 021235 104 IQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGR 183 (315)
Q Consensus 104 s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~ 183 (315)
++||||+|+|++|+++|++|++|||...+..+..+...+|+.+++.|||+|++++.. ++ ..+.++++++++.++++
T Consensus 90 tsGN~g~alA~aa~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~-~~---~~~~~~~~a~~l~~~~~ 165 (342)
T 4d9b_A 90 IQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDAL-TD---PDAQLQTLATRIEAQGF 165 (342)
T ss_dssp TTCHHHHHHHHHHHHHTCEEEEEEECTTCCCCHHHHHSHHHHHHHHTTCEEEECSCC-SS---HHHHHHHHHHHHHHTTC
T ss_pred cccHHHHHHHHHHHHhCCcEEEEEeCCCCCccccccccchHHHHHHCCCEEEEECch-hh---HHHHHHHHHHHHHhcCC
Confidence 899999999999999999999999998753210000135899999999999999874 21 22344456667777666
Q ss_pred CcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhH
Q 021235 184 RPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFY 263 (315)
Q Consensus 184 ~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~ 263 (315)
..|++|++++|+.+.+||.+++.||++|+... ..+|+||+|+|||||++|++.++|+.+|++|||||++.+++.+..
T Consensus 166 ~~~~~p~~~~n~~~~~G~~t~~~EI~~q~~~~---~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~~~~~~~~~ 242 (342)
T 4d9b_A 166 RPYVIPVGGSSALGAMGYVESALEIAQQCEEV---VGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTVSRSVAEQK 242 (342)
T ss_dssp CEEECCGGGCSHHHHHHHHHHHHHHHHHHTTT---CCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEESSSCHHHHH
T ss_pred ceEEeCCCCCChHHHHHHHHHHHHHHHHHhcc---CCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEecCcHHHHH
Confidence 67999999999999999999999999999621 369999999999999999999999999999999999999987765
Q ss_pred HHH----HHHHhhhcC---------CCCCCCeEEecCCcccchHHHHHH
Q 021235 264 DYT----QGLLDGLNA---------GVDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 264 ~~i----~~l~~g~~~---------~~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
..+ +.++++++. ....|+++.|+|.+...++..|..
T Consensus 243 ~~~~~~~~t~a~gl~~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 291 (342)
T 4d9b_A 243 PKVIALQQAIAGQLALTATADIHLWDDYFAPGYGVPNDAGMEAVKLLAS 291 (342)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCCEEECTTSTTCTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCccceEEEecCCCceEecCCHHHHHHHHHHHH
Confidence 444 345567664 135688999999998888887765
No 3
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=100.00 E-value=8e-44 Score=338.64 Aligned_cols=260 Identities=26% Similarity=0.362 Sum_probs=208.2
Q ss_pred cCCCCcCcccCCCCCCCccccCCCCCCC---C-CeEEEEeCCCC-CCCCchhHHHHHHHHHHHHHHcCCCEEEecCCchh
Q 021235 32 LAPIPSHVFSLGHFPTPIHKWNLPNLPH---N-TEVWLKRDDLS-GMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQS 106 (315)
Q Consensus 32 l~~~p~~r~~~~~~~TPL~~~~~~~L~~---g-~~v~vKrEdl~-~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~G 106 (315)
|..+| |+.+.+++|||++ +++|++ | .+||+||||+| |+.+||||+|++.+++.+|+++|.++||++|+|+|
T Consensus 3 l~~~~--~i~~~~~~TPL~~--~~~l~~~~~g~~~i~~K~E~~n~p~~~Gs~K~R~a~~~l~~a~~~g~~~vv~~G~ssG 78 (341)
T 1f2d_A 3 VAKFA--KYPLTFGPSPISN--LNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDYTHLVSIGGRQS 78 (341)
T ss_dssp TTSSC--CCCCSSSSCCEEE--CHHHHHHTTTCSEEEEEEGGGSCSSTTCCHHHHHHTTTHHHHHHSCCSEEEEEEETTC
T ss_pred cccCC--CcccCCCCCccee--HHhHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCCCEEEEcCCcch
Confidence 45566 7889999999999 677754 5 89999999998 86679999999999999999999999999888999
Q ss_pred HHHHHHHHHHHHcCCeEEEEecCCCc-cc--CCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCC
Q 021235 107 NHCRAAAVAAKYLNLDCYLILRTSKV-LV--DQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGR 183 (315)
Q Consensus 107 Nhg~alA~aa~~lGl~~~ivvp~~~~-~~--~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~ 183 (315)
|||+|+|++|+++|++|++|||+..+ .. .+.+...+|+.+++.|||+|++++...+.. .. +...+.++++.++++
T Consensus 79 N~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~~~-~~-~~~~~~a~~l~~~~~ 156 (341)
T 1f2d_A 79 NQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDIG-MR-KSFANALQELEDAGH 156 (341)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCSS-CC-HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCceEEEeccCCCccccccccccccccHHHHHhCCCEEEEeCCccchh-HH-HHHHHHHHHHHhcCC
Confidence 99999999999999999999999875 10 010112468999999999999998743311 00 122345566776655
Q ss_pred CcEEeCCC-CCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhh
Q 021235 184 RPYVIPVG-GSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYF 262 (315)
Q Consensus 184 ~~y~ip~g-~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~ 262 (315)
..|++|.+ ++|+.+..||.+++.||++|+.+. +..+|+||+|+|||||++|++.++++.++++||+||++.+++.+.
T Consensus 157 ~~~~i~~~~~~np~~~~G~~t~~~Ei~~q~~~~--~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigVe~~~~~~~~ 234 (341)
T 1f2d_A 157 KPYPIPAGCSEHKYGGLGFVGFADEVINQEVEL--GIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDASFTSEKT 234 (341)
T ss_dssp CEEEECGGGTTSTTTTTHHHHHHHHHHHHHHHH--TCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEEECSSCHHHH
T ss_pred cEEEeCCCcCCCCccHHHHHHHHHHHHHHHHhc--CCCCCEEEEecCchHhHHHHHHHHHhcCCCceEEEEEecCchHHH
Confidence 56889988 999999999999999999999631 246999999999999999999999999999999999999998776
Q ss_pred HHHHHH----HHhhhcCC----------CCCCCeEEecCCcccchHHHHHH
Q 021235 263 YDYTQG----LLDGLNAG----------VDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 263 ~~~i~~----l~~g~~~~----------~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
...+.+ ++++++.. ...++++.|+|.+...++..|..
T Consensus 235 ~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~ 285 (341)
T 1f2d_A 235 KEQTLRIANNTAKLIGVEHEFKDFTLDTRFAYPCYGVPNEGTIEAIRTCAE 285 (341)
T ss_dssp HHHHHHHHHHHHHHHTCCCCCSCCCEECTTSTTBTTBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCcCeEEEecCcccceEecCCHHHHHHHHHHHH
Confidence 554433 34455521 24577888888888877777654
No 4
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=100.00 E-value=2.6e-43 Score=344.00 Aligned_cols=261 Identities=18% Similarity=0.143 Sum_probs=192.9
Q ss_pred cccchhhccccCCC---------CCChhhhcCCCCc---------CcccCCCCCCCccccCCCCCCC--CCeEEEEeCCC
Q 021235 11 DAFGFKFLTKTSYA---------PPSWASHLAPIPS---------HVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDL 70 (315)
Q Consensus 11 ~~~~~~~~~~~~~~---------~p~~~~~l~~~p~---------~r~~~~~~~TPL~~~~~~~L~~--g~~v~vKrEdl 70 (315)
++|.+++..+-+|+ +|.|+..+. |. .++.+.+++|||++ +++|++ |++||+|+|++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~ig~TPLv~--l~~Ls~~~g~~I~lK~E~l 147 (430)
T 4aec_A 72 SASDFSLAMKRQSRSFADGSERDPSVVCEAVK--RETGPDGLNIADNVSQLIGKTPMVY--LNSIAKGCVANIAAKLEIM 147 (430)
T ss_dssp ------------------------------CC--CCCTTSSCSCBSSGGGGSSCCCEEE--CCGGGTTCSSEEEEEEGGG
T ss_pred cccchhhcccCccceeecCCCCCChhHhhhcC--ccccccccchhhhhhccCCCCCeEE--ChhhhhhcCCeEEEEECCC
Confidence 34778888888999 999999887 43 47888999999999 788876 78999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHHcCC-----CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHH
Q 021235 71 SGMQLSGNKVRKLEFLMADAVAQGA-----DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLL 145 (315)
Q Consensus 71 ~~~~~gg~K~R~l~~ll~~a~~~G~-----~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~ 145 (315)
|| +||||+|++.+++.+|+++|. ++||++ |+||||+|+|++|+++|++|+||||+..+ ..|+.
T Consensus 148 np--tGSfKdRgA~~~i~~A~~~G~l~~g~~~VV~a--SsGNhG~AlA~aAa~~Gl~~~IvmP~~~s--------~~k~~ 215 (430)
T 4aec_A 148 EP--CCSVKDRIGYSMVTDAEQKGFISPGKSVLVEP--TSGNTGIGLAFIAASRGYRLILTMPASMS--------MERRV 215 (430)
T ss_dssp ST--TSBTTHHHHHHHHHHHHHTTSCCTTTCEEEEE--CSSHHHHHHHHHHHHHTCEEEEEEETTSC--------HHHHH
T ss_pred CC--CCCHHHHHHHHHHHHHHHcCCCCCCCcEEEEE--CCCHHHHHHHHHHHHhCCEEEEEEcCCCC--------HHHHH
Confidence 99 699999999999999999987 678876 45999999999999999999999999874 35899
Q ss_pred HHHhCCCEEEEEcCC-cccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhh-HHHHHHHHHHHHHHHhcCCCCCCCCe
Q 021235 146 VERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIG-TWGYIEAIKEIEQQLQTGTGGVKFDD 223 (315)
Q Consensus 146 ~~r~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~-~~G~~t~a~EI~~Q~~~~~~~~~~D~ 223 (315)
.++.|||+|++++.. .|++ .++ .++++.++.+..|+++ ++.|+.+ ..||.+++.||++|+. .++|+
T Consensus 216 ~~r~~GAeVv~v~~~~~~~~-----a~~-~a~el~~~~~~~~~i~-~~~np~~~~aG~~T~a~EI~eQl~-----~~~D~ 283 (430)
T 4aec_A 216 LLKAFGAELVLTDPAKGMTG-----AVQ-KAEEILKNTPDAYMLQ-QFDNPANPKIHYETTGPEIWDDTK-----GKVDI 283 (430)
T ss_dssp HHHHTTCEEEEECGGGHHHH-----HHH-HHHHHHHHSTTEEECC-TTTCTHHHHHHHHTHHHHHHHHTT-----SCEEE
T ss_pred HHHHCCCEEEEECCCCChHH-----HHH-HHHHHHHhcCCcEEec-CCCCccHHHHHHHHHHHHHHHHcC-----CCCCE
Confidence 999999999999753 3432 223 3445555444556654 4567876 5899999999999985 36999
Q ss_pred EEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhH-HHHHHHHhhhcCC--------CCCCCeEEecCCcccchH
Q 021235 224 IVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFY-DYTQGLLDGLNAG--------VDSRDIVNIQNVSVYMTF 294 (315)
Q Consensus 224 ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~-~~i~~l~~g~~~~--------~~~~dvv~v~e~~~~~~~ 294 (315)
||+|+|||||++|++.++|+.+|+++||||++.+++.+.. ......+++++.+ ...|+++.|+|.+...++
T Consensus 284 vVvpvG~GGtlaGi~~~lk~~~p~~kVigVep~~s~~l~~g~~~~~~i~Gl~~~~~p~~l~~~~vd~~v~Vsd~ea~~a~ 363 (430)
T 4aec_A 284 FVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGIGAGFIPKNLDQKIMDEVIAISSEEAIETA 363 (430)
T ss_dssp EEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCTTTCSEEEEECHHHHHHHH
T ss_pred EEEeCCccHHHHHHHHHHHHhCCCCEEEEEEeCCCcHhhCCCccceeehhccCCCCcHHHHHHhCCeEEEECHHHHHHHH
Confidence 9999999999999999999999999999999998765431 1112345566542 246889999998888777
Q ss_pred HHHHH
Q 021235 295 KNILM 299 (315)
Q Consensus 295 ~~~~~ 299 (315)
..+..
T Consensus 364 r~La~ 368 (430)
T 4aec_A 364 KQLAL 368 (430)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
No 5
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=100.00 E-value=1e-42 Score=330.23 Aligned_cols=259 Identities=27% Similarity=0.434 Sum_probs=202.7
Q ss_pred cCCCCcCcccCCCCCCCccccCCCCCCC---C-CeEEEEeCCCC-CCCCchhHHHHHHHHHHHHHHcCCCEEEecCCchh
Q 021235 32 LAPIPSHVFSLGHFPTPIHKWNLPNLPH---N-TEVWLKRDDLS-GMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQS 106 (315)
Q Consensus 32 l~~~p~~r~~~~~~~TPL~~~~~~~L~~---g-~~v~vKrEdl~-~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~G 106 (315)
|..+| |+.+..++|||++ +++|++ | .+||+|+|++| |+.+||||+|++.+++.+++++|.++||++|+|+|
T Consensus 3 ~~~~~--~i~~~~~~TPL~~--~~~l~~~~~g~~~i~~K~E~~n~p~~~gs~K~R~a~~~l~~a~~~g~~~vv~~GassG 78 (338)
T 1tzj_A 3 LQRFP--RYPLTFGPTPIQP--LARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGCDTLVSIGGIQS 78 (338)
T ss_dssp GGGSC--CCCCSSSSCCEEE--CHHHHHHTTSSSEEEEEEGGGSCSSTTCCHHHHHHHTTHHHHHHTTCCEEEEEEETTC
T ss_pred cccCC--ccccCCCCCccEE--HHHHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCCCEEEEcCCchh
Confidence 45566 7889999999999 676654 5 79999999996 85569999999999999999999999999888999
Q ss_pred HHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCCCcE
Q 021235 107 NHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPY 186 (315)
Q Consensus 107 Nhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y 186 (315)
|||+|+|++|+++|++|++|||...+.....+...+|+.+++.|||+|+.++.. +++... +.+.++++++.++.+..|
T Consensus 79 N~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~-~~~~~~-~~~~~~a~~l~~~~~~~~ 156 (338)
T 1tzj_A 79 NQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVPDG-FDIGFR-RSWEDALESVRAAGGKPY 156 (338)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEEECCC---------CHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHhCCceEEEecCCCCccccccccCccHHHHHhCCCEEEEeCCc-chhhHH-HHHHHHHHHHHhcCCceE
Confidence 999999999999999999999998753211111246899999999999999864 432100 112344556666655568
Q ss_pred EeCCC-CCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcC-CCCCeEEEEeccCCchhhHH
Q 021235 187 VIPVG-GSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLG-TLKAKVHAFSVCDDPDYFYD 264 (315)
Q Consensus 187 ~ip~g-~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~-~~~~rVigV~~~g~~~~~~~ 264 (315)
++|.+ ++|+.+.+||.+++.||++|+.+. +.++|+||+|+|||||++|++.++|+. +++ ||+||++.++..+...
T Consensus 157 ~~p~~~~~n~~~~~g~~t~~~Ei~~q~~~~--~~~~d~vv~~vG~GGt~~Gi~~~~k~~g~~~-~vigve~~~~~~~~~~ 233 (338)
T 1tzj_A 157 AIPAGCSDHPLGGLGFVGFAEEVRAQEAEL--GFKFDYVVVCSVTGSTQAGMVVGFAADGRAD-RVIGVDASAKPAQTRE 233 (338)
T ss_dssp ECCGGGTSSTTTTTHHHHHHHHHHHHHHHH--TSCCSEEEEEESSSHHHHHHHHHHHTTTCGG-GEEEEECSSCHHHHHH
T ss_pred EeCCCcCCCcccHHHHHHHHHHHHHHHHhc--CCCCCEEEEecCCcHHHHHHHHHHHhhCCCC-eEEEEEccCchHHHHH
Confidence 89988 899999999999999999999631 136999999999999999999999988 788 9999999999877655
Q ss_pred HHH----HHHhhhcC------------CCCCCCeEEecCCcccchHHHHHH
Q 021235 265 YTQ----GLLDGLNA------------GVDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 265 ~i~----~l~~g~~~------------~~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
.+. .++++++. +...++++.|+|.+...++..+..
T Consensus 234 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~ 284 (338)
T 1tzj_A 234 QITRIARQTAEKVGLERDIMRADVVLDERFAGPEYGLPNEGTLEAIRLCAR 284 (338)
T ss_dssp HHHHHHHHHHHHHTCSSCCCGGGCEEECTTSCSBTTBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCcccEEEecCcccceeecCCHHHHHHHHHHHH
Confidence 543 34444442 123566788888887777777654
No 6
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=100.00 E-value=2.5e-40 Score=310.26 Aligned_cols=234 Identities=19% Similarity=0.175 Sum_probs=171.8
Q ss_pred cccCCCCCCCccccCCCCCCC--CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCC----CEEEecCCchhHHHHHH
Q 021235 39 VFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGA----DCIITIGGIQSNHCRAA 112 (315)
Q Consensus 39 r~~~~~~~TPL~~~~~~~L~~--g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~----~~vVt~g~s~GNhg~al 112 (315)
++...+++|||++ +++|++ |.+||+|+|++|| +||||+|++.+++.++.++|. ++||+ +|+||||+|+
T Consensus 7 ~i~~~~~~TPL~~--l~~l~~~~g~~i~~K~E~~~p--tgSfK~R~a~~~l~~a~~~g~~~~g~~vv~--assGN~g~a~ 80 (308)
T 2egu_A 7 SITELIGDTPAVK--LNRIVDEDSADVYLKLEFMNP--GSSVKDRIALAMIEAAEKAGKLKPGDTIVE--PTSGNTGIGL 80 (308)
T ss_dssp CGGGGSSCCCEEE--CCSSSCTTSCEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTCCCTTCEEEE--ECCHHHHHHH
T ss_pred HHHHhcCCCCeEE--CCcccccCCCEEEEEecccCC--CCChHHHHHHHHHHHHHHcCCCCCCCEEEE--eCCCHHHHHH
Confidence 6777889999999 788876 8899999999999 699999999999999999887 67886 4779999999
Q ss_pred HHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCC-cccccChHHHHHHHHHHHHHhCCCcEEeCCC
Q 021235 113 AVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVG 191 (315)
Q Consensus 113 A~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g 191 (315)
|++|+++|++|++|||+..+ ..|+.+++.+||+|+.++.. .|++ ..+ .++++.++.+. +++.+
T Consensus 81 A~~a~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~v~~~~~~~~~~~-----~~~-~a~~l~~~~~~--~~~~~ 144 (308)
T 2egu_A 81 AMVAAAKGYKAVLVMPDTMS--------LERRNLLRAYGAELVLTPGAQGMRG-----AIA-KAEELVREHGY--FMPQQ 144 (308)
T ss_dssp HHHHHHHTCEEEEEEESCSC--------HHHHHHHHHTTCEEEEECGGGHHHH-----HHH-HHHHHHHHHCC--BCC--
T ss_pred HHHHHHcCCCEEEEECCCCC--------HHHHHHHHHcCCEEEEECCCCCHHH-----HHH-HHHHHHHHCcC--CcCCc
Confidence 99999999999999999864 35899999999999999863 2432 222 34455444322 45666
Q ss_pred CCchhhH-HHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhH-HHHHHH
Q 021235 192 GSNSIGT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFY-DYTQGL 269 (315)
Q Consensus 192 ~~n~~~~-~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~-~~i~~l 269 (315)
+.|+.+. .||.+++.||++|+. .++|+||+|+|||||++|++.++|+.+|++||+||++.+++.+.. +.....
T Consensus 145 ~~n~~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~~~~~~~ 219 (308)
T 2egu_A 145 FKNEANPEIHRLTTGKEIVEQMG-----DQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADSPVLSGGKPGPHK 219 (308)
T ss_dssp ------------CHHHHHHHHHT-----TCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEECC-------------
T ss_pred CCChhHHHHHHHHHHHHHHHHcC-----CCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEEEeCCCccccCCCCCCcc
Confidence 7788865 689999999999996 359999999999999999999999999999999999999854321 112234
Q ss_pred HhhhcC--------CCCCCCeEEecCCcccchHHHHHH
Q 021235 270 LDGLNA--------GVDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 270 ~~g~~~--------~~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
+++++. ....|+++.|+|.+...++..+..
T Consensus 220 ~~g~~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~ 257 (308)
T 2egu_A 220 IQGIGAGFVPDILDTSIYDGVITVTTEEAFAAARRAAR 257 (308)
T ss_dssp ----------CCCCCCSCSEEEEECHHHHHHHHHHHHH
T ss_pred cCccCCCCCCHhHHHHhcCeEEEECHHHHHHHHHHHHH
Confidence 455443 124688999999999888887765
No 7
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=100.00 E-value=3e-40 Score=313.62 Aligned_cols=235 Identities=15% Similarity=0.102 Sum_probs=186.1
Q ss_pred cccCCCCCCCccccCCCCCCC-CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCC----CEE-EecCCchhHHHHHH
Q 021235 39 VFSLGHFPTPIHKWNLPNLPH-NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGA----DCI-ITIGGIQSNHCRAA 112 (315)
Q Consensus 39 r~~~~~~~TPL~~~~~~~L~~-g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~----~~v-Vt~g~s~GNhg~al 112 (315)
++...+++|||++ +++|.. |.+||+|+|++|| +||||+|++.+++.+|.++|. ++| |++ |+||||+|+
T Consensus 14 ~i~~~ig~TPL~~--l~~l~~~g~~i~~K~E~~~p--tGSfK~R~a~~~i~~a~~~g~l~~g~~vvv~a--SsGN~g~al 87 (334)
T 3tbh_A 14 SIDQLIGQTPALY--LNKLNNTKAKVVLKMECENP--MASVKDRLGFAIYDKAEKEGKLIPGKSIVVES--SSGNTGVSL 87 (334)
T ss_dssp SGGGGSSCCCEEE--CCTTCCSSSEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEE--CSSHHHHHH
T ss_pred HHHHhcCCCCeEE--CCcccCCCCEEEEEeCCCCC--ccCcHHHHHHHHHHHHHHcCCCCCCCeEEEEe--CCCHHHHHH
Confidence 7888899999999 777722 8899999999999 699999999999999999987 674 765 459999999
Q ss_pred HHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCC-cccccChHHHHHHHHHHHHHhCCCcEEeCCC
Q 021235 113 AVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVG 191 (315)
Q Consensus 113 A~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g 191 (315)
|++|+++|++|+||||+..+ ..|+++++.+||+|+.++.. .|++ .++. ++++.++.+..|+++ +
T Consensus 88 A~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~~~~~~-----~~~~-a~~~~~~~~~~~~i~-~ 152 (334)
T 3tbh_A 88 AHLGAIRGYKVIITMPESMS--------LERRCLLRIFGAEVILTPAALGMKG-----AVAM-AKKIVAANPNAVLAD-Q 152 (334)
T ss_dssp HHHHHHHTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGGHHHH-----HHHH-HHHHHHHCTTEEECC-T
T ss_pred HHHHHHhCCCEEEEECCCCC--------HHHHHHHHHCCCEEEEECCCCCchH-----HHHH-HHHHHHhCCCEEECC-c
Confidence 99999999999999999864 35899999999999999863 2432 3233 344544443455554 3
Q ss_pred CCchhh-HHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhH-HHHHHH
Q 021235 192 GSNSIG-TWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFY-DYTQGL 269 (315)
Q Consensus 192 ~~n~~~-~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~-~~i~~l 269 (315)
+.|+.+ ..||.+++.||++|+. ..+|+||+|+|||||++|++.++|+.+|++||+||++.+++.+.. ......
T Consensus 153 ~~np~n~~~g~~t~~~Ei~~q~~-----~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~~~g~~~~~~ 227 (334)
T 3tbh_A 153 FATKYNALIHEETTGPEIWEQTN-----HNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTESPVLSGGKPGPHK 227 (334)
T ss_dssp TTCHHHHHHHHHTHHHHHHHHTT-----SCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEEEETTSCTTTTCCCCCCS
T ss_pred cCChhHHHHHHHHHHHHHHHHhC-----CCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEEeeCCchHhhCCCcCCee
Confidence 567774 4578899999999985 369999999999999999999999999999999999999865431 111123
Q ss_pred HhhhcCC--------CCCCCeEEecCCcccchHHHHHH
Q 021235 270 LDGLNAG--------VDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 270 ~~g~~~~--------~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
+++++.+ ...|+++.|+|.+...++..+..
T Consensus 228 ~~gi~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 265 (334)
T 3tbh_A 228 IQGIGPGFVPDVLDRSLIDEVLCVAGDDAIETALKLTR 265 (334)
T ss_dssp CTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHH
T ss_pred cCCCCCCcCCHHHHHHhCCEEEEECHHHHHHHHHHHHH
Confidence 3455432 24688999999998888777654
No 8
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=100.00 E-value=1.5e-40 Score=319.07 Aligned_cols=243 Identities=18% Similarity=0.141 Sum_probs=187.3
Q ss_pred hhhhcCCCCcCcccCCCCCCCccccCCCCCCC--CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEecCCch
Q 021235 28 WASHLAPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQ 105 (315)
Q Consensus 28 ~~~~l~~~p~~r~~~~~~~TPL~~~~~~~L~~--g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~ 105 (315)
.+...+.+| +......+|||++ +++|++ |++||+|+|++|| +||||+|++.+++.++.++|.++||+++ +
T Consensus 30 l~r~~~~~~--~~~~~~~~TPL~~--~~~l~~~~g~~v~~K~E~~~p--tGSfK~Rga~~~i~~a~~~g~~~vv~aS--s 101 (364)
T 4h27_A 30 MGRGSEFMM--SGEPLHVKTPIRD--SMALSKMAGTSVYLKMDSAQP--SGSFKIRGIGHFCKRWAKQGCAHFVCSS--S 101 (364)
T ss_dssp -------------CCSSCCCCEEE--EHHHHHHHTSEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTCCEEEECC--S
T ss_pred cchhHHhhh--hcCCCCCcCCeEE--ChhhHHHhCCEEEEEeCCCCC--CCCHHHHHHHHHHHHHHhcCCCEEEEeC--C
Confidence 333455566 4556678999999 788876 8999999999999 6999999999999999999999999874 4
Q ss_pred hHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCCCc
Q 021235 106 SNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRP 185 (315)
Q Consensus 106 GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 185 (315)
||||+|+|++|+++|++|+||||+..+ ..|+++++.+||+|+.++. .|++ . .+.++++.++.++.
T Consensus 102 GN~g~alA~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~Vv~v~~-~~~~-----a-~~~a~~l~~~~~~~ 166 (364)
T 4h27_A 102 GNAGMAAAYAARQLGVPATIVVPGTTP--------ALTIERLKNEGATVKVVGE-LLDE-----A-FELAKALAKNNPGW 166 (364)
T ss_dssp SHHHHHHHHHHHHHTCCEEEEEETTSC--------HHHHHHHHTTTCEEEEECS-STTH-----H-HHHHHHHHHHSTTE
T ss_pred ChHHHHHHHHHHHhCCceEEEECCCCC--------HHHHHHHHHcCCEEEEECC-CHHH-----H-HHHHHHHHHhCCCe
Confidence 999999999999999999999999874 3589999999999999986 4654 2 23344565554344
Q ss_pred EEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCC-CCCeEEEEeccCCchhhHH
Q 021235 186 YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT-LKAKVHAFSVCDDPDYFYD 264 (315)
Q Consensus 186 y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~-~~~rVigV~~~g~~~~~~~ 264 (315)
++++. +.|+.+..||.+++.||++|+. ..+|+||+|+|||||++|++.++|+.+ |+++|+||++.+++.+...
T Consensus 167 ~~~~~-~~np~~~~G~~t~~~Ei~~q~~-----~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe~~~~~~~~~~ 240 (364)
T 4h27_A 167 VYIPP-FDDPLIWEGHASIVKELKETLW-----EKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAMETFGAHSFHAA 240 (364)
T ss_dssp EEECS-SCSHHHHHHHTHHHHHHHHHCS-----SCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHHHH
T ss_pred EEeCC-CCCHHHHHHHHHHHHHHHHHhC-----CCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEecCCChHHHHH
Confidence 54543 3689999999999999999985 369999999999999999999999887 7899999999998765321
Q ss_pred ----------HHHHHHhhhcCCC-----------CCCCeEEecCCcccchHHHHHH
Q 021235 265 ----------YTQGLLDGLNAGV-----------DSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 265 ----------~i~~l~~g~~~~~-----------~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
.+..++++++... ..++.+.|+|.+...++..+..
T Consensus 241 ~~~g~~~~~~~~~tia~gl~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~ 296 (364)
T 4h27_A 241 TTAGKLVSLPKITSVAKALGVKTVGAQALKLFQEHPIFSEVISDQEAVAAIEKFVD 296 (364)
T ss_dssp HHHTSCCCCSCCCCSCGGGCCSSCCHHHHHHHTTSCEEEEEECHHHHHHHHHHHHH
T ss_pred HHCCCcccCCCCCcHHHHhCCCCCcHHHHHHHHhcCCEEEEECHHHHHHHHHHHHH
Confidence 1233455555421 2344567889888888877764
No 9
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=100.00 E-value=2.9e-41 Score=322.02 Aligned_cols=244 Identities=18% Similarity=0.166 Sum_probs=190.5
Q ss_pred CChhhhcCCCCcCcccCCCCCCCccccCCCCCCC--CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHc----CCCEEE
Q 021235 26 PSWASHLAPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQ----GADCII 99 (315)
Q Consensus 26 p~~~~~l~~~p~~r~~~~~~~TPL~~~~~~~L~~--g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~----G~~~vV 99 (315)
++..+...... ++...+++|||++ +++|++ |++||+|+|++|| +||||+|++.+++.++.++ +.++||
T Consensus 7 ~~~~~i~~a~~--~i~~~i~~TPL~~--~~~l~~~~g~~i~~K~E~~~p--tGSfK~Rga~~~i~~a~~~g~~~~~~~vv 80 (346)
T 3l6b_A 7 ISFADVEKAHI--NIRDSIHLTPVLT--SSILNQLTGRNLFFKCELFQK--TGSFKIRGALNAVRSLVPDALERKPKAVV 80 (346)
T ss_dssp SCHHHHHHHHH--HHGGGSCCCCEEC--CHHHHHHHTSEEEEEEGGGSG--GGBTHHHHHHHHHHTTC-----CCCSCEE
T ss_pred CCHHHHHHHHH--HHhcccCCCCeEE--chhhHHHhCCeEEEEeCCCCC--CCCcHHHHHHHHHHHHHHhccccCCCEEE
Confidence 44444333333 5666779999999 788876 8999999999999 7999999999999988774 667899
Q ss_pred ecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHH
Q 021235 100 TIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLL 179 (315)
Q Consensus 100 t~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~ 179 (315)
++ |+||||+|+|++|+++|++|+||||+..+ ..|+++++.|||+|+.++.. |++ . .+.++++.
T Consensus 81 ~~--SsGNhg~a~A~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~v~~~-~~~-----~-~~~a~~l~ 143 (346)
T 3l6b_A 81 TH--SSGNHGQALTYAAKLEGIPAYIVVPQTAP--------DCKKLAIQAYGASIVYCEPS-DES-----R-ENVAKRVT 143 (346)
T ss_dssp EE--CSSHHHHHHHHHHHHTTCCEEEEEETTSC--------HHHHHHHHHTTCEEEEECSS-HHH-----H-HHHHHHHH
T ss_pred Ee--CCCHHHHHHHHHHHHhCCCEEEEECCCCC--------HHHHHHHHHCCCEEEEECCC-HHH-----H-HHHHHHHH
Confidence 76 45999999999999999999999999875 35899999999999999873 543 2 22344454
Q ss_pred HhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCc
Q 021235 180 KEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 259 (315)
Q Consensus 180 ~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~ 259 (315)
++.+..|+.|++ |+....||.+++.||++|++ .+|+||+|+|||||++|++.++|+.+|++||+||++.+++
T Consensus 144 ~~~~~~~i~~~~--np~~~~g~~t~~~Ei~~q~~------~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~ 215 (346)
T 3l6b_A 144 EETEGIMVHPNQ--EPAVIAGQGTIALEVLNQVP------LVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSNAD 215 (346)
T ss_dssp HHHTCEECCSSS--CHHHHHHHHHHHHHHHHHST------TCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGC
T ss_pred HhcCCEEECCCC--ChHHHHHHHHHHHHHHHhCC------CCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCCH
Confidence 443344444443 88889999999999999984 5999999999999999999999999999999999999976
Q ss_pred hhhHHH-----------HHHHHhhhcCC----------CCCCCeEEecCCcccchHHHHHHH
Q 021235 260 DYFYDY-----------TQGLLDGLNAG----------VDSRDIVNIQNVSVYMTFKNILMN 300 (315)
Q Consensus 260 ~~~~~~-----------i~~l~~g~~~~----------~~~~dvv~v~e~~~~~~~~~~~~~ 300 (315)
.+.... +..+++++... ...|+++.|+|.+...++..+...
T Consensus 216 ~~~~s~~~g~~~~~~~~~~tia~gl~~~~g~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~ 277 (346)
T 3l6b_A 216 DCYQSKLKGKLMPNLYPPETIADGVKSSIGLNTWPIIRDLVDDIFTVTEDEIKCATQLVWER 277 (346)
T ss_dssp HHHHHHHHTSCCCCSSCCCCSCGGGCSCCCTTHHHHHHHHCCEEEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCccccCCCCCchhhhccCCCcHHHHHHHHHcCCeEEEECHHHHHHHHHHHHHH
Confidence 543221 22344454421 146889999999998888877643
No 10
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=100.00 E-value=6.8e-40 Score=308.38 Aligned_cols=234 Identities=17% Similarity=0.118 Sum_probs=188.2
Q ss_pred cccCCCCCCCccccCCCCCCC-CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCC----CEEEecCCchhHHHHHHH
Q 021235 39 VFSLGHFPTPIHKWNLPNLPH-NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGA----DCIITIGGIQSNHCRAAA 113 (315)
Q Consensus 39 r~~~~~~~TPL~~~~~~~L~~-g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~----~~vVt~g~s~GNhg~alA 113 (315)
++.+.+++|||++ +++| + |.+||+|+|++|| +||||+|++.+++.+|.++|. ++||++ |+||||+|+|
T Consensus 6 ~i~~~~~~TPL~~--l~~l-~~g~~i~~K~E~~~p--tGSfK~R~a~~~i~~a~~~g~~~~~~~vv~~--ssGN~g~a~A 78 (316)
T 1y7l_A 6 DNSYSIGNTPLVR--LKHF-GHNGNVVVKIEGRNP--SYSVKCRIGANMVWQAEKDGTLTKGKEIVDA--TSGNTGIALA 78 (316)
T ss_dssp SGGGGCCCCCEEE--CSSS-SSTTCEEEEETTSSG--GGBTHHHHHHHHHHHHHHTTSSCTTCEEEES--CCSHHHHHHH
T ss_pred hhHHhcCCCCcEE--CccC-CCCCEEEEEeccCCC--CCChHHHHHHHHHHHHHHcCCCCCCCEEEEe--CCcHHHHHHH
Confidence 6778889999999 6777 5 7899999999999 699999999999999999887 688876 5699999999
Q ss_pred HHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCC-cccccChHHHHHHHHHHHHHhCCCc-EEeCCC
Q 021235 114 VAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRP-YVIPVG 191 (315)
Q Consensus 114 ~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~~~~~-y~ip~g 191 (315)
++|+++|++|+||||+..+ ..|+.+++.+||+|+.++.. .|++ . .+.++++.++.+.. |+++ +
T Consensus 79 ~~a~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~v~~~~~~~~~~~-----~-~~~a~~~~~~~~~~~~~~~-~ 143 (316)
T 1y7l_A 79 YVAAARGYKITLTMPETMS--------LERKRLLCGLGVNLVLTEGAKGMKG-----A-IAKAEEIVASDPSRYVMLK-Q 143 (316)
T ss_dssp HHHHHHTCCEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGGHHHH-----H-HHHHHHHHHHCTTTEECCC-T
T ss_pred HHHHHcCCcEEEEECCCCC--------HHHHHHHHHcCCEEEEeCCCCCHHH-----H-HHHHHHHHHhCCCCEEECC-C
Confidence 9999999999999999864 35899999999999999863 2442 2 22344555554456 5444 5
Q ss_pred CCchhhHH-HHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCC-CCCeEEEEeccCCchhhHHH----
Q 021235 192 GSNSIGTW-GYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT-LKAKVHAFSVCDDPDYFYDY---- 265 (315)
Q Consensus 192 ~~n~~~~~-G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~-~~~rVigV~~~g~~~~~~~~---- 265 (315)
+.|+.+.. ||.+++.||++|+. .++|+||+|+|||||++|++.++|+.+ |.+|||||++.+++.+..-+
T Consensus 144 ~~n~~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~~~~~~~~~g~~ 218 (316)
T 1y7l_A 144 FENPANPQIHRETTGPEIWKDTD-----GKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVESPVISQTLAGEE 218 (316)
T ss_dssp TTCTHHHHHHHHTHHHHHHHHTT-----TCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEETTSCHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHcC-----CCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEEecCCCccccccccCCc
Confidence 67888765 58999999999985 359999999999999999999999998 99999999999986543211
Q ss_pred ---HHHHHhhhcCC--------CCCCCeEEecCCcccchHHHHHH
Q 021235 266 ---TQGLLDGLNAG--------VDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 266 ---i~~l~~g~~~~--------~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
....+++++.. ...|+++.|+|.+...++..+..
T Consensus 219 ~~~~~~~~~gi~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 263 (316)
T 1y7l_A 219 VKPGPHKIQGIGAGFIPKNLDLSIIDRVETVDSDTALATARRLMA 263 (316)
T ss_dssp CCCCCCSCTTSCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHH
T ss_pred cCCCCcccCcCCCCCCCchhhHhhCCEEEEECHHHHHHHHHHHHH
Confidence 01234555532 13588999999998888877765
No 11
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=100.00 E-value=5.7e-40 Score=308.50 Aligned_cols=236 Identities=19% Similarity=0.174 Sum_probs=190.4
Q ss_pred cccCCCCCCCccccCCCCCCC--CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCC----CEEEecCCchhHHHHHH
Q 021235 39 VFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGA----DCIITIGGIQSNHCRAA 112 (315)
Q Consensus 39 r~~~~~~~TPL~~~~~~~L~~--g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~----~~vVt~g~s~GNhg~al 112 (315)
++...+++|||++ +++|++ |.+||+|+|++|| +||||+|++.+++.++.++|. ++||+ +|+||||+|+
T Consensus 9 ~i~~~~~~TPL~~--~~~l~~~~g~~i~~K~E~~~p--tgSfK~R~a~~~l~~a~~~g~~~~g~~vv~--assGN~g~al 82 (313)
T 2q3b_A 9 DITQLIGRTPLVR--LRRVTDGAVADIVAKLEFFNP--ANSVKDRIGVAMLQAAEQAGLIKPDTIILE--PTSGNTGIAL 82 (313)
T ss_dssp SGGGGSCCCCEEE--CSSSCTTCCSEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTCCCTTCEEEE--ECSSHHHHHH
T ss_pred hHHHhcCCCceEE--CcccccccCcEEEEEehhcCC--CCcHHHHHHHHHHHHHHHcCCCCCCCEEEE--eCCCHHHHHH
Confidence 6777889999999 788876 7899999999998 799999999999999999887 67886 4779999999
Q ss_pred HHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCC-cccccChHHHHHHHHHHHHHhCCCcEEeCCC
Q 021235 113 AVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVG 191 (315)
Q Consensus 113 A~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g 191 (315)
|++|+++|++|++|||...+ ..|+.+++.+||+|+.++.. .|++ . .+.++++.++.+. .+++.+
T Consensus 83 A~~a~~~G~~~~iv~p~~~~--------~~k~~~~~~~Ga~v~~~~~~~~~~~-----~-~~~a~~l~~~~~~-~~~~~~ 147 (313)
T 2q3b_A 83 AMVCAARGYRCVLTMPETMS--------LERRMLLRAYGAELILTPGADGMSG-----A-IAKAEELAKTDQR-YFVPQQ 147 (313)
T ss_dssp HHHHHHHTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGGHHHH-----H-HHHHHHHHHHCTT-EECCCT
T ss_pred HHHHHHcCCcEEEEECCCCC--------HHHHHHHHHCCCEEEEeCCCCCHHH-----H-HHHHHHHHHhCCC-EEeCCC
Confidence 99999999999999999864 35899999999999999863 2432 2 2234455555433 356667
Q ss_pred CCchhhHHH-HHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhH-HHHHHH
Q 021235 192 GSNSIGTWG-YIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFY-DYTQGL 269 (315)
Q Consensus 192 ~~n~~~~~G-~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~-~~i~~l 269 (315)
+.|+.+..| |.+++.||++|+. .++|+||+|+|||||++|++.++|+.+|++|||||++.+++.+.. +.....
T Consensus 148 ~~n~~~~~~~~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~~~~~~~~~g~~~ 222 (313)
T 2q3b_A 148 FENPANPAIHRVTTAEEVWRDTD-----GKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGGQKGPHP 222 (313)
T ss_dssp TTCTHHHHHHHHTHHHHHHHHTT-----TCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTSCTTTTCCCCCCC
T ss_pred CCChhhHHHHHHHHHHHHHHHcC-----CCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEEeeCCCccccCCCCCCcc
Confidence 789988866 8999999999985 369999999999999999999999999999999999999865421 111223
Q ss_pred HhhhcCC--------CCCCCeEEecCCcccchHHHHHHH
Q 021235 270 LDGLNAG--------VDSRDIVNIQNVSVYMTFKNILMN 300 (315)
Q Consensus 270 ~~g~~~~--------~~~~dvv~v~e~~~~~~~~~~~~~ 300 (315)
+++++.. ...|+++.|+|.+...++..+...
T Consensus 223 ~~g~~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~ 261 (313)
T 2q3b_A 223 IQGIGAGFVPPVLDQDLVDEIITVGNEDALNVARRLARE 261 (313)
T ss_dssp CTTSCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHHH
T ss_pred cCCcCCCCCChhhhHhhccEEEEECHHHHHHHHHHHHHH
Confidence 4555432 135789999999998888877653
No 12
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=100.00 E-value=1.8e-39 Score=304.02 Aligned_cols=228 Identities=19% Similarity=0.187 Sum_probs=185.0
Q ss_pred cccCCCCCCCccccCCCCCCC--CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCC----CEEEecCCchhHHHHHH
Q 021235 39 VFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGA----DCIITIGGIQSNHCRAA 112 (315)
Q Consensus 39 r~~~~~~~TPL~~~~~~~L~~--g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~----~~vVt~g~s~GNhg~al 112 (315)
|+...+++|||++ +++|++ |.+||+|+|++|| +||||+|++.+++.+++++|. ++||++ |+||||+|+
T Consensus 3 ~i~~~~~~TPL~~--~~~l~~~~g~~v~~K~E~~~p--tGSfK~R~a~~~i~~a~~~g~~~~g~~vv~~--ssGN~g~a~ 76 (303)
T 2v03_A 3 TLEQTIGNTPLVK--LQRMGPDNGSEVWLKLEGNNP--AGSVKDRAALSMIVEAEKRGEIKPGDVLIEA--TSGNTGIAL 76 (303)
T ss_dssp SGGGGSSCCCEEE--CSSSSCSSSCEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTCCCTTCEEEEE--CSSHHHHHH
T ss_pred chHhhcCCCCcEE--CcccccccCCEEEEEeccCCC--CCCcHHHHHHHHHHHHHHcCCCCCCCEEEEE--CCcHHHHHH
Confidence 5677789999999 788876 7899999999998 699999999999999999887 789976 459999999
Q ss_pred HHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCC-cccccChHHHHHHHHHHHHHhCCCcEEeCCC
Q 021235 113 AVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVG 191 (315)
Q Consensus 113 A~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g 191 (315)
|++|+++|++|++|||+..+ ..|+++++.+||+|+.++.. .|++ . .+.++++.++.+..| + .+
T Consensus 77 A~~a~~~G~~~~iv~p~~~~--------~~k~~~~~~~Ga~v~~~~~~~~~~~-----~-~~~a~~~~~~~~~~~-~-~~ 140 (303)
T 2v03_A 77 AMIAALKGYRMKLLMPDNMS--------QERRAAMRAYGAELILVTKEQGMEG-----A-RDLALEMANRGEGKL-L-DQ 140 (303)
T ss_dssp HHHHHHHTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEECTTTHHHH-----H-HHHHHHHHHTTSCEE-C-CT
T ss_pred HHHHHHcCCcEEEEECCCCC--------HHHHHHHHHcCCEEEEECCCCCHHH-----H-HHHHHHHHHhCCCcc-c-CC
Confidence 99999999999999999864 35899999999999999863 3543 2 233445555422333 3 23
Q ss_pred CCchhhHH-HHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHHHHHHHH
Q 021235 192 GSNSIGTW-GYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLL 270 (315)
Q Consensus 192 ~~n~~~~~-G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~~i~~l~ 270 (315)
+.|+.+.. ||.+++.||++|+. .++|+||+|+|||||++|++.++|+.+|.+||+||++.+++.+.. +
T Consensus 141 ~~n~~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~------~ 209 (303)
T 2v03_A 141 FNNPDNPYAHYTTTGPEIWQQTG-----GRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPG------I 209 (303)
T ss_dssp TTCTHHHHHHHHTHHHHHHHHTT-----TCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEECTTCCCTT------C
T ss_pred cCChhhHHHhcCCcHHHHHHHhC-----CCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEEcCCCCccccc------C
Confidence 46787765 78999999999985 359999999999999999999999999999999999999875432 2
Q ss_pred hhhcC--------CCCCCCeEEecCCcccchHHHHHH
Q 021235 271 DGLNA--------GVDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 271 ~g~~~--------~~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
++++. ....|+++.|+|.+...++..+..
T Consensus 210 ~gl~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 246 (303)
T 2v03_A 210 RRWPTEYLPGIFNASLVDEVLDIHQRDAENTMRELAV 246 (303)
T ss_dssp CCCCGGGCCTTCCGGGCSEEEEECHHHHHHHHHHHHH
T ss_pred CcCCCCCCCcccchHHCCEEEEECHHHHHHHHHHHHH
Confidence 33332 124688999999998888877765
No 13
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=100.00 E-value=1e-39 Score=308.74 Aligned_cols=232 Identities=16% Similarity=0.119 Sum_probs=185.9
Q ss_pred cccCCCCCCCccccCCCCCCC---------CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCC----CEEEecCCch
Q 021235 39 VFSLGHFPTPIHKWNLPNLPH---------NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGA----DCIITIGGIQ 105 (315)
Q Consensus 39 r~~~~~~~TPL~~~~~~~L~~---------g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~----~~vVt~g~s~ 105 (315)
++...+++|||++ +++|++ |.+||+|+|++|| +||||+|++.+++.+|+++|. ++||++ |+
T Consensus 8 ~i~~~ig~TPL~~--~~~l~~~~~~~~~~~g~~v~~K~E~~~p--tGSfK~R~a~~~l~~a~~~g~l~~~~~vv~a--Ss 81 (325)
T 3dwg_A 8 SLLQALGNTPLVG--LQRLSPRWDDGRDGPHVRLWAKLEDRNP--TGSIKDRPAVRMIEQAEADGLLRPGATILEP--TS 81 (325)
T ss_dssp STGGGCSCCCEEE--CTTTSSBSSCBTTBCCEEEEEEETTSST--TSBTTHHHHHHHHHHHHHTTCCCTTCEEEEE--CS
T ss_pred CHHHhcCCCCcEE--ccccchhhcccccCCCcEEEEEECCCCC--CCChHHHHHHHHHHHHHHcCCCCCCCEEEEe--CC
Confidence 4566779999999 777753 4699999999999 699999999999999999997 788875 56
Q ss_pred hHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCC-cccccChHHHHHHHHHHHHHhCCC
Q 021235 106 SNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRR 184 (315)
Q Consensus 106 GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~~~~ 184 (315)
||||+|+|++|+++|++|+||||+..+ ..|+.+++.+||+|+.++.. .|++ ..+ .++++.++.++
T Consensus 82 GN~g~alA~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~~~~~~-----~~~-~a~~l~~~~~~ 147 (325)
T 3dwg_A 82 GNTGISLAMAARLKGYRLICVMPENTS--------VERRQLLELYGAQIIFSAAEGGSNT-----AVA-TAKELAATNPS 147 (325)
T ss_dssp SHHHHHHHHHHHHHTCEEEEEEESSSC--------HHHHHHHHHHTCEEEEECSTTTHHH-----HHH-HHHHHHHHCTT
T ss_pred cHHHHHHHHHHHHcCCcEEEEECCCCC--------HHHHHHHHHCCCEEEEECCCCCHHH-----HHH-HHHHHHHhCCC
Confidence 999999999999999999999999864 35899999999999999863 2432 223 34455555443
Q ss_pred cEEeCCCCCchhhH-HHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhH
Q 021235 185 PYVIPVGGSNSIGT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFY 263 (315)
Q Consensus 185 ~y~ip~g~~n~~~~-~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~ 263 (315)
.|++ .++.||.+. .||.+++.||++|+. .+|+||+|+|||||++|++.++|..+|++||+||++.+++.+
T Consensus 148 ~~~~-~~~~np~~~~~g~~t~~~Ei~~q~~------~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~-- 218 (325)
T 3dwg_A 148 WVML-YQYGNPANTDSHYCGTGPELLADLP------EITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYGEGV-- 218 (325)
T ss_dssp SBCC-CTTTCHHHHHHHHHTHHHHHHHHCT------TCCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEEEEECCGGG--
T ss_pred eEeC-CCCCCHHHHHHHHHHHHHHHHHhcC------CCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEeeCCCcch--
Confidence 4444 446788887 589999999999985 399999999999999999999999999999999999998765
Q ss_pred HHHHHHHhhhcC----CCCCCCeEEecCCcccchHHHHHH
Q 021235 264 DYTQGLLDGLNA----GVDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 264 ~~i~~l~~g~~~----~~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
..+..+.+++.. ....|+++.|+|.+...++..+..
T Consensus 219 ~~~~~i~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 258 (325)
T 3dwg_A 219 YALRNMDEGFVPELYDPEILTARYSVGAVDAVRRTRELVH 258 (325)
T ss_dssp GCCSSGGGCCCCTTCCGGGCSEEEEEEHHHHHHHHHHHHH
T ss_pred hccCcccCCcCcccccHhhCCeEEEECHHHHHHHHHHHHH
Confidence 122222222211 124688999999998888877765
No 14
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=100.00 E-value=7.4e-40 Score=306.55 Aligned_cols=232 Identities=19% Similarity=0.185 Sum_probs=185.9
Q ss_pred cCCCCCCCccccCCCCCCC--CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCC----C--EEEecCCchhHHHHHH
Q 021235 41 SLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGA----D--CIITIGGIQSNHCRAA 112 (315)
Q Consensus 41 ~~~~~~TPL~~~~~~~L~~--g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~----~--~vVt~g~s~GNhg~al 112 (315)
...+++|||++ +++|++ |.+||+|+|++|| +||||+|++.+++.+++++|. + +||+. |+||||+|+
T Consensus 4 ~~~~~~TPL~~--~~~l~~~~g~~v~~K~E~~~p--tGSfK~R~a~~~l~~a~~~g~~~~g~~~~vv~a--ssGN~g~a~ 77 (304)
T 1ve1_A 4 EGAIGKTPVVR--LAKVVEPDMAEVWVKLEGLNP--GGSIKDRPAWYMIKDAEERGILRPGSGQVIVEP--TSGNTGIGL 77 (304)
T ss_dssp GGGCCCCCEEE--CCSSSCTTSCEEEEEEGGGST--TSBTTHHHHHHHHHHHHHTTSCCTTSCCEEEES--CCSHHHHHH
T ss_pred HHhcCCCCcEE--CcccccccCCEEEEEecccCC--CCcHHHHHHHHHHHHHHHcCCCCCCCccEEEEe--CCcHHHHHH
Confidence 34568999999 788876 7899999999998 699999999999999999886 6 88864 779999999
Q ss_pred HHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCCc-ccccChHHHHHHHHHHHHHhCCCcEEeCCC
Q 021235 113 AVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEE-YSKIGSVTLTNILKEKLLKEGRRPYVIPVG 191 (315)
Q Consensus 113 A~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~-~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g 191 (315)
|++|+++|++|++|||...+ ..|+.+++.+||+|+.++... |++ ..+ .++++.++ +..| ++.+
T Consensus 78 A~~a~~~G~~~~i~~p~~~~--------~~k~~~~~~~Ga~V~~~~~~~~~~~-----~~~-~a~~l~~~-~~~~-~~~~ 141 (304)
T 1ve1_A 78 AMIAASRGYRLILTMPAQMS--------EERKRVLKAFGAELVLTDPERRMLA-----ARE-EALRLKEE-LGAF-MPDQ 141 (304)
T ss_dssp HHHHHHHTCEEEEEEETTCC--------HHHHHHHHHTTCEEEEECTTTHHHH-----HHH-HHHHHHHH-HTCB-CCCT
T ss_pred HHHHHHcCCcEEEEeCCCCC--------HHHHHHHHHcCCEEEEECCCCCHHH-----HHH-HHHHHHhc-CCCE-eCCC
Confidence 99999999999999998864 358999999999999998642 543 222 33445443 2334 4556
Q ss_pred CCchhhHHH-HHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHH-HHHHH
Q 021235 192 GSNSIGTWG-YIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYD-YTQGL 269 (315)
Q Consensus 192 ~~n~~~~~G-~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~-~i~~l 269 (315)
+.|+.+..| |.+++.||++|+. .++|+||+|+|+|||++|++.++|+.+|.+||+||++.+++.+... .....
T Consensus 142 ~~n~~~~~g~~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~~~~~~g~~~~~~ 216 (304)
T 1ve1_A 142 FKNPANVRAHYETTGPELYEALE-----GRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARSNVLSGGKMGQHG 216 (304)
T ss_dssp TTCHHHHHHHHHTHHHHHHHHTT-----TCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEEGGGCTTTTCCCCCCS
T ss_pred CCChhHHHHHHHHHHHHHHHHcC-----CCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEEecCCCccccCCCCCCcc
Confidence 789999999 5999999999985 3599999999999999999999999999999999999987643210 01123
Q ss_pred HhhhcCC--------CCCCCeEEecCCcccchHHHHHH
Q 021235 270 LDGLNAG--------VDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 270 ~~g~~~~--------~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
+++++.. ...|+++.|+|.+...++..+..
T Consensus 217 ~~gl~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 254 (304)
T 1ve1_A 217 FQGMGPGFIPENLDLSLLDGVIQVWEEDAFPLARRLAR 254 (304)
T ss_dssp CTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHH
T ss_pred cCCCCCCCCChhhhhhhCCEEEEECHHHHHHHHHHHHH
Confidence 3555431 24678999999999888887765
No 15
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=100.00 E-value=1.2e-39 Score=313.72 Aligned_cols=242 Identities=18% Similarity=0.139 Sum_probs=188.5
Q ss_pred hhcCCCCcCcccCCCCCCCccccCCCCCCC--CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEecCCchhH
Q 021235 30 SHLAPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSN 107 (315)
Q Consensus 30 ~~l~~~p~~r~~~~~~~TPL~~~~~~~L~~--g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GN 107 (315)
.....+| ++....++|||++ +++|++ |++||+|+|++|| +||||+|++.+++.++.++|.++||+++ +||
T Consensus 32 ry~~~~p--~~~~~~~~TPL~~--l~~l~~~~g~~i~~K~E~~~p--tGSfKdRga~~~l~~a~~~g~~~vv~aS--sGN 103 (372)
T 1p5j_A 32 RGSEFMM--SGEPLHVKTPIRD--SMALSKMAGTSVYLKMDSAQP--SGSFKIRGIGHFCKRWAKQGCAHFVCSS--AGN 103 (372)
T ss_dssp ----------CCCSSCCCCEEE--EHHHHHHHTSCEEEECGGGSG--GGBTTHHHHHHHHHHHHHTTCCEEEECC--SSH
T ss_pred cHHHhcc--cccCCCCCCCceE--cHhhHHHhCCEEEEEEcCCCC--CCChHHHHHHHHHHHHHHcCCCEEEEeC--CCH
Confidence 3445566 5666789999999 677765 8899999999998 7999999999999999999999999874 499
Q ss_pred HHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCCCcEE
Q 021235 108 HCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYV 187 (315)
Q Consensus 108 hg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ 187 (315)
||+|+|++|+++|++|+||||...+ ..|+.+++.+||+|+.++. .|++. .+.++++.++.+..++
T Consensus 104 ~g~alA~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~-~~~~a------~~~a~~l~~~~~~~~~ 168 (372)
T 1p5j_A 104 AGMAAAYAARQLGVPATIVVPGTTP--------ALTIERLKNEGATCKVVGE-LLDEA------FELAKALAKNNPGWVY 168 (372)
T ss_dssp HHHHHHHHHHHHTCCEEEEECTTCC--------HHHHHHHHHTTCEEEECCS-CHHHH------HHHHHHHHHHSTTEEE
T ss_pred HHHHHHHHHHHcCCcEEEEECCCCC--------HHHHHHHHhcCCEEEEECC-CHHHH------HHHHHHHHHhcCCcEE
Confidence 9999999999999999999999874 3589999999999999886 46542 2334455554234555
Q ss_pred eCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCC-CCCeEEEEeccCCchhhHHH-
Q 021235 188 IPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT-LKAKVHAFSVCDDPDYFYDY- 265 (315)
Q Consensus 188 ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~-~~~rVigV~~~g~~~~~~~~- 265 (315)
+++ +.|+.+.+||.+++.||++|+. ..+|+||+|+|||||++|++.++|+.+ |++||+||++.+++.+....
T Consensus 169 v~~-~~n~~~~~G~~t~~~Ei~~ql~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~~~~~~~~~~~~ 242 (372)
T 1p5j_A 169 IPP-FDDPLIWEGHASIVKELKETLW-----EKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFGAHSFHAATT 242 (372)
T ss_dssp CCS-SCCHHHHHHHTHHHHHHHHHCS-----SCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHHHHHH
T ss_pred eCC-CCCHHHHhhHHHHHHHHHHHcC-----CCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEEecCCChHHHHHHH
Confidence 533 2489999999999999999985 359999999999999999999999986 88999999999986543211
Q ss_pred ---------HHHHHhhhcCC-----------CCCCCeEEecCCcccchHHHHHHH
Q 021235 266 ---------TQGLLDGLNAG-----------VDSRDIVNIQNVSVYMTFKNILMN 300 (315)
Q Consensus 266 ---------i~~l~~g~~~~-----------~~~~dvv~v~e~~~~~~~~~~~~~ 300 (315)
+..++++++.. ...++++.|+|.+...++..+...
T Consensus 243 ~g~~~~~~~~~tia~gl~~~~~~~~~~~~~~~~~~~~~~Vsd~e~~~a~~~l~~~ 297 (372)
T 1p5j_A 243 AGKLVSLPKITSVAKALGVKTVGSQALKLFQEHPIFSEVISDQEAVAAIEKFVDD 297 (372)
T ss_dssp HTSCCCCSCCCCSCGGGCCSSCCHHHHHHHHHSCEEEEEECHHHHHHHHHHHHHH
T ss_pred cCCceecCCCceeecccCCCCCCHHHHHHHhhcCCEEEEECHHHHHHHHHHHHHH
Confidence 12244555542 134668999999988888777653
No 16
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=100.00 E-value=1.3e-39 Score=307.30 Aligned_cols=235 Identities=17% Similarity=0.103 Sum_probs=187.2
Q ss_pred cccCCCCCCCccccCCCCCCC--CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCC-----CEEEecCCchhHHHHH
Q 021235 39 VFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGA-----DCIITIGGIQSNHCRA 111 (315)
Q Consensus 39 r~~~~~~~TPL~~~~~~~L~~--g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~-----~~vVt~g~s~GNhg~a 111 (315)
++.+..++|||++ +++|++ |.+||+|+|++|| +||||+|++.+++.+++++|. ++||+. |+||||+|
T Consensus 8 ~i~~~~~~TPL~~--~~~l~~~~g~~v~~K~E~~~p--tGSfK~R~a~~~l~~a~~~G~~~~~~~~vv~a--ssGN~g~a 81 (322)
T 1z7w_A 8 DVTELIGNTPLVY--LNNVAEGCVGRVAAKLEMMEP--CSSVKDRIGFSMISDAEKKGLIKPGESVLIEP--TSGNTGVG 81 (322)
T ss_dssp SGGGGSSCCCEEE--CCGGGTTCSSEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEE--CSSHHHHH
T ss_pred HHHHhcCCCCeEE--CccccccCCceEEEEecccCC--CCchHHHHHHHHHHHHHHcCCCCCCCCEEEEe--CCCHHHHH
Confidence 7788889999999 788876 6899999999998 799999999999999999997 688874 67999999
Q ss_pred HHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCC-cccccChHHHHHHHHHHHHHhCCCcEEeCC
Q 021235 112 AAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPV 190 (315)
Q Consensus 112 lA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~ 190 (315)
+|++|+++|++|++|||...+ ..|+.+++.+||+|+.++.. .|++ . .+.++++.++.++.|+++
T Consensus 82 lA~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~~~~~~-----~-~~~a~~~~~~~~~~~~i~- 146 (322)
T 1z7w_A 82 LAFTAAAKGYKLIITMPASMS--------TERRIILLAFGVELVLTDPAKGMKG-----A-IAKAEEILAKTPNGYMLQ- 146 (322)
T ss_dssp HHHHHHHHTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGGHHHH-----H-HHHHHHHHHHCTTEEECC-
T ss_pred HHHHHHHcCCCEEEEeCCCCC--------HHHHHHHHHcCCEEEEeCCCCCHHH-----H-HHHHHHHHHhCCCeEeCC-
Confidence 999999999999999999864 35899999999999999863 2432 2 233445555544556654
Q ss_pred CCCchhhH-HHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHH-HHHH
Q 021235 191 GGSNSIGT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYD-YTQG 268 (315)
Q Consensus 191 g~~n~~~~-~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~-~i~~ 268 (315)
++.|+.+. .||.+++.||++|+. .++|+||+|+|||||++|++.++|+.+|++||+||++.+++.+... ....
T Consensus 147 ~~~n~~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~~~~~~~ 221 (322)
T 1z7w_A 147 QFENPANPKIHYETTGPEIWKGTG-----GKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPH 221 (322)
T ss_dssp TTTCTHHHHHHHHTHHHHHHHHTT-----TCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTCCCCCC
T ss_pred CCCChhHHHHHHHHHHHHHHHHhc-----CCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEEecCCCccccCCCCCCc
Confidence 34566654 488999999999985 3699999999999999999999999999999999999987654210 0111
Q ss_pred HHhhhcCC--------CCCCCeEEecCCcccchHHHHHH
Q 021235 269 LLDGLNAG--------VDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 269 l~~g~~~~--------~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
.+++++.+ ...|+++.|+|.+...++..+..
T Consensus 222 ~~~gl~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~ 260 (322)
T 1z7w_A 222 KIQGIGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLAL 260 (322)
T ss_dssp SCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHH
T ss_pred ccCcCcCCCCChhhhHHhCCEEEEECHHHHHHHHHHHHH
Confidence 23455432 13578999999988888777764
No 17
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=100.00 E-value=3e-39 Score=307.86 Aligned_cols=240 Identities=15% Similarity=0.079 Sum_probs=183.3
Q ss_pred CCCcCcccCCCCCCCccccCCCCCCC--CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCC-----CEEEecCCchh
Q 021235 34 PIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGA-----DCIITIGGIQS 106 (315)
Q Consensus 34 ~~p~~r~~~~~~~TPL~~~~~~~L~~--g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~-----~~vVt~g~s~G 106 (315)
.+.+ .+...+++|||++ +++|++ |++||+|+|++|| +||||+|++.+++.+|.++|. ++||+. |+|
T Consensus 24 ~i~~-~i~~lIG~TPLv~--~~~Ls~~~G~~IylK~E~lnp--tGSfK~RgA~~~i~~a~~~g~l~~g~~~Vv~a--SsG 96 (344)
T 3vc3_A 24 NIKK-HVSQLIGRTPLVY--LNKVTEGCGAYVAVKQEMMQP--TASIADRPAYAMITDAEEKNLITPGKTTLIEP--TSG 96 (344)
T ss_dssp SCBS-SGGGGSCCCCEEE--CCSTTTTCCSEEEEEEGGGST--TSBTTHHHHHHHHHHHHHTTCCCTTTCEEEEE--CSS
T ss_pred hhhc-cHhhhcCCCceEE--CcccchhhCCEEEEEecCCCC--CCCcHHHHHHHHHHHHHHcCCCCCCCCEEEEe--CCc
Confidence 4444 4556679999999 899988 8999999999999 699999999999999998874 578864 569
Q ss_pred HHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCCCcE
Q 021235 107 NHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPY 186 (315)
Q Consensus 107 Nhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y 186 (315)
|||+|+|++|+++|++|+||||+.++ ..|+..++.|||+|+.++... +. ........+...+ .+..+
T Consensus 97 N~g~alA~~aa~~G~~~~IvmP~~~~--------~~k~~~~~~~GA~Vv~v~~~~-~~---~~~~~~~~~~~~~-~~~~~ 163 (344)
T 3vc3_A 97 NMGISMAFMAAMKGYKMVLTMPSYTS--------LERRVTMRAFGAELILTDPAK-GM---GGTVKKAYELLEN-TPNAH 163 (344)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGG-HH---HHHHHHHHHHHHH-STTEE
T ss_pred HHHHHHHHHHHHcCCcEEEEECCCCh--------HHHHHHHHHcCCEEEEECCCC-cc---hHHHHHHHHHHhh-ccCce
Confidence 99999999999999999999999875 358999999999999997532 11 1122222222333 33444
Q ss_pred EeCCCCCchhhH-HHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhH-H
Q 021235 187 VIPVGGSNSIGT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFY-D 264 (315)
Q Consensus 187 ~ip~g~~n~~~~-~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~-~ 264 (315)
.+.++.||... .||.+++.||++|+. ..+|+||+|+|+||+++|++.++|+.+|+++|++||+.+++.+.. .
T Consensus 164 -~~~~~~np~~~~a~~~t~g~EI~eq~~-----~~~d~vv~~vGgGG~~~Gi~~~~k~~~p~v~vigVep~~s~~l~~~~ 237 (344)
T 3vc3_A 164 -MLQQFSNPANTQVHFETTGPEIWEDTN-----GQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGK 237 (344)
T ss_dssp -CCCTTTCHHHHHHHHHTHHHHHHHHTT-----TCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTCC
T ss_pred -eccccccchhHHHHHHHHHHHHHHHhC-----CCceEEEEecCCccchHHHhhhhHhhCCCceEEEEcCCCChhhcCCC
Confidence 44455677654 457899999999985 479999999999999999999999999999999999998765421 1
Q ss_pred HHHHHHhhhcCC--------CCCCCeEEecCCcccchHHHHHH
Q 021235 265 YTQGLLDGLNAG--------VDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 265 ~i~~l~~g~~~~--------~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
.....+.+.+.. ...|+++.|+|.+....+..++.
T Consensus 238 ~~~~~i~g~g~~~~~~~~~~~~~d~~v~v~d~eai~a~~~L~~ 280 (344)
T 3vc3_A 238 PGPHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLAL 280 (344)
T ss_dssp CCCCSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHH
T ss_pred CCCeeEecccccccCcccchhhceEEEEECHHHHHHHHHHHHH
Confidence 112234455542 24688999998776666555543
No 18
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=100.00 E-value=1.6e-39 Score=309.54 Aligned_cols=235 Identities=17% Similarity=0.131 Sum_probs=189.0
Q ss_pred cccCCCCCCCccccCCCCCC-----C-CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCC----CEEEecCCchhHH
Q 021235 39 VFSLGHFPTPIHKWNLPNLP-----H-NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGA----DCIITIGGIQSNH 108 (315)
Q Consensus 39 r~~~~~~~TPL~~~~~~~L~-----~-g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~----~~vVt~g~s~GNh 108 (315)
++.+..++|||++ +++|+ . |++||+|+|++|| +||||+|++.+++.++.++|. ++||++ |+|||
T Consensus 16 ~i~~~~g~TPL~~--~~~l~~~~~~~~g~~v~~K~E~~~p--tGSfKdR~a~~~l~~a~~~g~~~~g~~vv~a--SsGN~ 89 (343)
T 2pqm_A 16 NILETIGGTPLVE--LHGVTEHPRIKKGTRILVKLEYFNP--MSSVKDRVGFNIVYQAIKDGRLKPGMEIIES--TSGNT 89 (343)
T ss_dssp SGGGGSSCCCEEE--CCGGGCSTTSCTTCEEEEEEGGGST--TSBTHHHHHHHHHHHHHHHTSSCTTCEEEEE--CSSHH
T ss_pred HHHhhcCCCCeEE--CCccccccccccCcEEEEEeccCCC--CCChHHHHHHHHHHHHHHcCCCCCCCEEEEE--CCcHH
Confidence 6778889999999 77775 3 7899999999999 799999999999999998887 688876 45999
Q ss_pred HHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCC-cccccChHHHHHHHHHHHHHhCCCcEE
Q 021235 109 CRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYV 187 (315)
Q Consensus 109 g~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~~~~~y~ 187 (315)
|+|+|++|+++|++|+||||+..+ ..|+++++.+||+|+.++.. .|++ . .+.++++.++.+..|+
T Consensus 90 g~alA~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~~~~~~-----~-~~~a~~~~~~~~~~y~ 155 (343)
T 2pqm_A 90 GIALCQAGAVFGYRVNIAMPSTMS--------VERQMIMKAFGAELILTEGKKGMPG-----A-IEEVNKMIKENPGKYF 155 (343)
T ss_dssp HHHHHHHHHHHTCCEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGGHHHH-----H-HHHHHHHHHHSTTTEE
T ss_pred HHHHHHHHHHcCCCEEEEECCCCC--------HHHHHHHHHCCCEEEEECCCCCHHH-----H-HHHHHHHHHhCCCcEE
Confidence 999999999999999999999864 35899999999999999863 2432 2 2234455555445656
Q ss_pred eCCCCCchhhH-HHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhH-HH
Q 021235 188 IPVGGSNSIGT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFY-DY 265 (315)
Q Consensus 188 ip~g~~n~~~~-~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~-~~ 265 (315)
++.++.|+.+. .||.+++ ||++|+. .++|+||+|+|||||++|++.++|+.+|++||+||++.+++.+.. +.
T Consensus 156 ~~~~~~n~~n~~~g~~t~~-Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~~~~ 229 (343)
T 2pqm_A 156 VANQFGNPDNTAAHHYTAN-EIWEDTD-----GEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEGKAK 229 (343)
T ss_dssp ECCTTTCHHHHHHHHHHHH-HHHHHTT-----TCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCTTTTCCC
T ss_pred ECCCCCChhHHHHHHHHHH-HHHHHcC-----CCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEEecCCCcccccCCC
Confidence 76677788865 6799999 9999985 369999999999999999999999999999999999998854321 11
Q ss_pred HHHHHhhhcCC--------CCCCCeEEecCCcccchHHHHHH
Q 021235 266 TQGLLDGLNAG--------VDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 266 i~~l~~g~~~~--------~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
....+++++.+ ...|+++.|+|.+...++..+..
T Consensus 230 ~~~~~~gl~~~~~~~~~~~~~~d~~~~Vsd~e~~~a~~~l~~ 271 (343)
T 2pqm_A 230 GPHGIQGIGAGFIPDIYKKEFVDEIIPIKTQDAWKMARAVVK 271 (343)
T ss_dssp CCCCCTTCCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHH
T ss_pred CCeecCccCCCCCCHHHHHHhCCeEEEECHHHHHHHHHHHHH
Confidence 11234555431 23578999999998888887765
No 19
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=100.00 E-value=1.2e-39 Score=311.05 Aligned_cols=232 Identities=17% Similarity=0.193 Sum_probs=188.5
Q ss_pred cccCCCCCCCccccCC--CCCCC--CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEecCCchhHHHHHHHH
Q 021235 39 VFSLGHFPTPIHKWNL--PNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAV 114 (315)
Q Consensus 39 r~~~~~~~TPL~~~~~--~~L~~--g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg~alA~ 114 (315)
++.+.+++|||++ + ++|++ |++||+|+|++|| +||||+|++.+++.++.++|.++||++ |+||||+|+|+
T Consensus 21 ~v~~~~g~TPL~~--~~~~~l~~~~g~~v~~K~E~~~p--tgS~KdR~a~~~l~~a~~~g~~~vv~~--SsGN~g~alA~ 94 (351)
T 3aey_A 21 VISLLEGSTPLIP--LKGPEEARKKGIRLYAKYEGLNP--TGSFKDRGMTLAVSKAVEGGAQAVACA--STGNTAASAAA 94 (351)
T ss_dssp CCCSCCCCCCEEE--CCCCHHHHTTTCEEEEEEGGGST--TSBTTHHHHHHHHHHHHHTTCSEEEES--CSSHHHHHHHH
T ss_pred ceecCCCCCCeee--cCchhhHHHhCCeEEEEecCCCC--cccHHHHHHHHHHHHHHhcCCCEEEEe--CCCHHHHHHHH
Confidence 7889999999999 6 77754 8899999999998 799999999999999999999999976 67999999999
Q ss_pred HHHHcCCeEEEEecCC-CcccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCC
Q 021235 115 AAKYLNLDCYLILRTS-KVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS 193 (315)
Q Consensus 115 aa~~lGl~~~ivvp~~-~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~ 193 (315)
+|+++|++|++|||+. .+ ..|+.+++.+||+|+.++.. |++. .+.++++.++.+ .|+++ + .
T Consensus 95 ~a~~~G~~~~iv~p~~~~~--------~~k~~~~~~~GA~V~~v~~~-~~~~------~~~a~~l~~~~~-~~~~~-~-~ 156 (351)
T 3aey_A 95 YAARAGILAIVVLPAGYVA--------LGKVAQSLVHGARIVQVEGN-FDDA------LRLTQKLTEAFP-VALVN-S-V 156 (351)
T ss_dssp HHHHHTSEEEEEEETTCSC--------HHHHHHHHHTTCEEEEEESC-HHHH------HHHHHHHHHHSS-EEECS-T-T
T ss_pred HHHHcCCCEEEEECCCCCC--------HHHHHHHHHcCCEEEEECCC-HHHH------HHHHHHHHHhcC-cEecC-C-C
Confidence 9999999999999987 53 35899999999999999874 6542 233445555443 56664 3 7
Q ss_pred chhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCC------CCeEEEEeccCCchhhHHHH-
Q 021235 194 NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTL------KAKVHAFSVCDDPDYFYDYT- 266 (315)
Q Consensus 194 n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~------~~rVigV~~~g~~~~~~~~i- 266 (315)
|+.+..||.+++.||++|+. ..+|+||+|+|||||++|++.++|+.++ .+||+||++.++..+...+.
T Consensus 157 n~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~g~~~ 231 (351)
T 3aey_A 157 NPHRLEGQKTLAFEVVDELG-----DAPHYHALPVGNAGNITAHWMGYKAYHALGKAKRLPRMLGFQAAGAAPLVLGRPV 231 (351)
T ss_dssp CHHHHHHHHHHHHHHHHHHS-----SCCSEEEEECSSSHHHHHHHHHHHHHHHHTSCSSCCEEEEEEEGGGCHHHHTSCC
T ss_pred CccceeeeeeHHHHHHHHcC-----CCCCEEEEecCchHHHHHHHHHHHHHHhccccCCCCeEEEEecCCCChhhcCccc
Confidence 89999999999999999995 3589999999999999999999997643 68999999999765432211
Q ss_pred ---HHHHhhhcCCC-------------CCCCeEEecCCcccchHHHHHH
Q 021235 267 ---QGLLDGLNAGV-------------DSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 267 ---~~l~~g~~~~~-------------~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
..++++++... ..++++.|+|.+...++..+..
T Consensus 232 ~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~ 280 (351)
T 3aey_A 232 ERPETLATAIRIGNPASWQGAVRAKEESGGVIEAVTDEEILFAYRYLAR 280 (351)
T ss_dssp SSCCCSCGGGCCSSCTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHH
T ss_pred CCccchhHhhcCCCCCCHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHH
Confidence 23456655421 1357899999888888777654
No 20
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.5e-39 Score=311.52 Aligned_cols=233 Identities=17% Similarity=0.189 Sum_probs=189.9
Q ss_pred cccCCCCCCCccccCCCCCCC--CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEecCCchhHHHHHHHHHH
Q 021235 39 VFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAA 116 (315)
Q Consensus 39 r~~~~~~~TPL~~~~~~~L~~--g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa 116 (315)
++.+.+++|||++ +++|++ |++||+|+|++|| +||||+|++.+++.++.++|.++||++ |+||||+|+|++|
T Consensus 31 ~v~~~~g~TPL~~--~~~l~~~~g~~i~~K~E~~~p--tgSfKdR~a~~~l~~a~~~g~~~vv~a--SsGN~g~alA~~a 104 (360)
T 2d1f_A 31 PVTLLEGGTPLIA--ATNLSKQTGCTIHLKVEGLNP--TGSFKDRGMTMAVTDALAHGQRAVLCA--STGNTSASAAAYA 104 (360)
T ss_dssp CCCCCCCCCCEEE--CHHHHHHHSSEEEEEEGGGST--TSBTTHHHHHHHHHHHHHTTCSEEEEC--CSSHHHHHHHHHH
T ss_pred ccccccCCCCCee--chhhHHHhCCeEEEEECCCCC--CcCHHHHHHHHHHHHHHHCCCCEEEEe--CCcHHHHHHHHHH
Confidence 6788999999999 788866 8999999999998 799999999999999999999999976 6799999999999
Q ss_pred HHcCCeEEEEecCC-CcccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCCch
Q 021235 117 KYLNLDCYLILRTS-KVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNS 195 (315)
Q Consensus 117 ~~lGl~~~ivvp~~-~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~ 195 (315)
+++|++|++|||+. .+ ..|+.+++.+||+|+.++.. |++. .+.++++.++.++.|+++. .|+
T Consensus 105 ~~~G~~~~i~~p~~~~~--------~~k~~~~~~~GA~v~~v~~~-~~~~------~~~a~~l~~~~~~~~~i~~--~n~ 167 (360)
T 2d1f_A 105 ARAGITCAVLIPQGKIA--------MGKLAQAVMHGAKIIQIDGN-FDDC------LELARKMAADFPTISLVNS--VNP 167 (360)
T ss_dssp HHHTCEEEEEECSSCCC--------HHHHHHHHHTTCEEEEBSSC-HHHH------HHHHHHHHHHCTTEEECST--TCH
T ss_pred HHcCCcEEEEEcCCCCC--------HHHHHHHHHcCCEEEEECCC-HHHH------HHHHHHHHHhcCCeEEcCC--CCh
Confidence 99999999999987 53 35899999999999999873 6542 2334556555544677653 789
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCC------CCCeEEEEeccCCchhhHHHH---
Q 021235 196 IGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT------LKAKVHAFSVCDDPDYFYDYT--- 266 (315)
Q Consensus 196 ~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~------~~~rVigV~~~g~~~~~~~~i--- 266 (315)
...+||.+++.||++|+. ..+|+||+|+|||||++|++.++++.. +.+||+||++.++..+...+.
T Consensus 168 ~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~g~~~~~ 242 (360)
T 2d1f_A 168 VRIEGQKTAAFEIVDVLG-----TAPDVHALPVGNAGNITAYWKGYTEYHQLGLIDKLPRMLGTQAAGAAPLVLGEPVSH 242 (360)
T ss_dssp HHHHHHTHHHHHHHHHHS-----SCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEEGGGCHHHHSSCCSS
T ss_pred hhhhhHHHHHHHHHHHcC-----CCCCEEEEeCCchHHHHHHHHHHHHHHhccccccCceEEEEecCCCCHHhcCCccCC
Confidence 999999999999999995 358999999999999999999998764 368999999999765432211
Q ss_pred -HHHHhhhcCCC-------------CCCCeEEecCCcccchHHHHHH
Q 021235 267 -QGLLDGLNAGV-------------DSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 267 -~~l~~g~~~~~-------------~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
..++++++... ..++++.|+|.+...++..+..
T Consensus 243 ~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~ 289 (360)
T 2d1f_A 243 PETIATAIRIGSPASWTSAVEAQQQSKGRFLAASDEEILAAYHLVAR 289 (360)
T ss_dssp CCCSCGGGCCSSCTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHH
T ss_pred ccchHHHhCCCCCCcHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHH
Confidence 23456665421 1247899999988888777654
No 21
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=100.00 E-value=2.8e-39 Score=308.62 Aligned_cols=232 Identities=19% Similarity=0.224 Sum_probs=188.5
Q ss_pred cccCCCCCCCccccCCCCCCC--CCe--EEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEecCCchhHHHHHHHH
Q 021235 39 VFSLGHFPTPIHKWNLPNLPH--NTE--VWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAV 114 (315)
Q Consensus 39 r~~~~~~~TPL~~~~~~~L~~--g~~--v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg~alA~ 114 (315)
++.+.+++|||++ +++|++ |++ ||+|+|++|| +||||+|++.+++.+|.++|.++||++ |+||||+|+|+
T Consensus 23 ~v~~~~g~TPL~~--~~~l~~~~g~~~~i~~K~E~~~p--tGS~KdR~a~~~l~~a~~~g~~~vv~~--SsGN~g~alA~ 96 (352)
T 2zsj_A 23 IVTLYEGNTPLIE--ADNLARAIGFKGKIYLKYEGLNP--TGSFKDRGMTLAISKAVEAGKRAVICA--STGNTSASAAA 96 (352)
T ss_dssp CCCCCCCCCCEEE--CHHHHHHHTCCSEEEEEEGGGST--TSBTTHHHHHHHHHHHHHTTCCEEEEC--CSSHHHHHHHH
T ss_pred ceecccCCCCCee--hHHHHHHhCCCceEEEEECCCCC--CccHHHHHHHHHHHHHHhcCCCEEEEe--CCchHHHHHHH
Confidence 7889999999999 777765 888 9999999998 799999999999999999999999976 67999999999
Q ss_pred HHHHcCCeEEEEecCC-CcccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCC
Q 021235 115 AAKYLNLDCYLILRTS-KVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS 193 (315)
Q Consensus 115 aa~~lGl~~~ivvp~~-~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~ 193 (315)
+|+++|++|++|||+. .+ ..|+.+++.+||+|+.++. .|++. .+.++++.++.+ .|+++ + .
T Consensus 97 ~a~~~G~~~~i~~p~~~~~--------~~k~~~~~~~GA~v~~v~~-~~~~~------~~~a~~l~~~~~-~~~~~-~-~ 158 (352)
T 2zsj_A 97 YAARAGLRAYVLLPKGAVA--------IGKLSQAMIYGAKVLAIQG-TFDDA------LNIVRKIGENFP-VEIVN-S-V 158 (352)
T ss_dssp HHHHHTCEEEEEEEGGGCC--------HHHHHHHHHTTCEEEEESS-CHHHH------HHHHHHHHHHSS-EEECS-T-T
T ss_pred HHHhcCCcEEEEECCCCCC--------HHHHHHHHHcCCEEEEECC-CHHHH------HHHHHHHHHHcC-cEECC-C-C
Confidence 9999999999999987 53 3589999999999999987 46542 233445555443 56665 3 7
Q ss_pred chhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCC------CCeEEEEeccCCchhhHHHH-
Q 021235 194 NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTL------KAKVHAFSVCDDPDYFYDYT- 266 (315)
Q Consensus 194 n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~------~~rVigV~~~g~~~~~~~~i- 266 (315)
|+.+..||.+++.||++|+. ..+|+||+|+|||||++|++.++|+..+ .+||+||++.++..+.....
T Consensus 159 n~~~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~g~~~ 233 (352)
T 2zsj_A 159 NPYRIEGQKTAAFEICDTLG-----EAPDYHFIPVGNAGNITAYWKGFKIYYEEGKITKLPRMMGWQAEGAAPIVKGYPI 233 (352)
T ss_dssp CTHHHHHHTHHHHHHHHHHS-----SCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEETTBCHHHHTSCC
T ss_pred CcchhhhHhHHHHHHHHHcC-----CCCCEEEEeCCCcHHHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCcHHhcCCcc
Confidence 89999999999999999995 3589999999999999999999997643 68999999999765432211
Q ss_pred ---HHHHhhhcCCC-------------CCCCeEEecCCcccchHHHHHH
Q 021235 267 ---QGLLDGLNAGV-------------DSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 267 ---~~l~~g~~~~~-------------~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
..++++++... ..++++.|+|.+...++..+..
T Consensus 234 ~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~ 282 (352)
T 2zsj_A 234 KNPQTIATAIKIGNPYSWKSALKAAQESGGKIDAVSDSEILYAYKLIAS 282 (352)
T ss_dssp SSCCCSCGGGCCSSCTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHH
T ss_pred CCCcchhHHhcCCCCCcHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHH
Confidence 23456665421 1247899999888888777654
No 22
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.7e-39 Score=302.32 Aligned_cols=229 Identities=19% Similarity=0.213 Sum_probs=183.8
Q ss_pred CCCCCCccccCCCCCCC--CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcC
Q 021235 43 GHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLN 120 (315)
Q Consensus 43 ~~~~TPL~~~~~~~L~~--g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lG 120 (315)
...+|||++ +++|++ |++||+|+|++|| +||||+|++.+++.++.++|.++||+++ +||||+|+|++|+++|
T Consensus 4 ~~~~TPL~~--~~~l~~~~g~~v~~K~E~~~p--tgS~K~R~a~~~l~~a~~~g~~~vv~~s--sGN~g~alA~~a~~~G 77 (318)
T 2rkb_A 4 FHVVTPLLE--SWALSQVAGMPVFLKCENVQP--SGSFKIRGIGHFCQEMAKKGCRHLVCSS--GGNAGIAAAYAARKLG 77 (318)
T ss_dssp SSCCCCEEE--EHHHHHHHTSCEEEEEGGGST--TSBTTHHHHHHHHHHHHHTTCCEEEECC--CSHHHHHHHHHHHHHT
T ss_pred CCccCCcee--hHhhHHHhCCeEEEEecCCCC--CCCHHHHHHHHHHHHHHHcCCCEEEEEC--CchHHHHHHHHHHHcC
Confidence 347899999 677765 8899999999998 6999999999999999999999999874 4999999999999999
Q ss_pred CeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhhHHH
Q 021235 121 LDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWG 200 (315)
Q Consensus 121 l~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~~~G 200 (315)
++|++|||+..+ ..|+.+++.+||+|+.++. .|++. .+.++++.++. ..++++. +.|+.+..|
T Consensus 78 ~~~~i~~p~~~~--------~~k~~~~~~~Ga~V~~~~~-~~~~~------~~~a~~~~~~~-~~~~~~~-~~n~~~~~g 140 (318)
T 2rkb_A 78 IPATIVLPESTS--------LQVVQRLQGEGAEVQLTGK-VWDEA------NLRAQELAKRD-GWENVPP-FDHPLIWKG 140 (318)
T ss_dssp CCEEEEECTTCC--------HHHHHHHHHTTCEEEECCS-SHHHH------HHHHHHHHHST-TEEECCS-SCSHHHHHH
T ss_pred CCEEEEECCCCc--------HHHHHHHHhcCCEEEEECC-CHHHH------HHHHHHHHHhc-CCEEeCC-CCChhhccc
Confidence 999999999874 3579999999999999886 46542 23344555543 3444433 368999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCC-CCCeEEEEeccCCchhhHHH----------HHHH
Q 021235 201 YIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT-LKAKVHAFSVCDDPDYFYDY----------TQGL 269 (315)
Q Consensus 201 ~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~-~~~rVigV~~~g~~~~~~~~----------i~~l 269 (315)
|.+++.||++|+. ..+|+||+|+|||||++|++.++|+.+ |++||+||++.+++.+.... +..+
T Consensus 141 ~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~~~~~~~~~~g~~~~~~~~~t~ 215 (318)
T 2rkb_A 141 HASLVQELKAVLR-----TPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMETHGAHCFNAAITAGKLVTLPDITSV 215 (318)
T ss_dssp HHHHHHHHHHHSS-----SCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEETTBCHHHHHHHHTSCCBCSCCCSS
T ss_pred hhHHHHHHHHhcC-----CCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEecCCChHHHHHHHcCCcccCCCCCce
Confidence 9999999999985 359999999999999999999999876 78999999999976543211 1234
Q ss_pred HhhhcCC-----------CCCCCeEEecCCcccchHHHHHH
Q 021235 270 LDGLNAG-----------VDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 270 ~~g~~~~-----------~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
+++++.. ...++++.|+|.+...++..+..
T Consensus 216 a~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~ 256 (318)
T 2rkb_A 216 AKSLGAKTVAARALECMQVCKIHSEVVEDTEAVSAVQQLLD 256 (318)
T ss_dssp CGGGCCSBCCHHHHHHHHHSCEEEEEECHHHHHHHHHHHHH
T ss_pred ecccCCCCCCHHHHHHHHHcCCEEEEECHHHHHHHHHHHHH
Confidence 4455542 13456899999998888877764
No 23
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=100.00 E-value=3.6e-40 Score=313.87 Aligned_cols=242 Identities=16% Similarity=0.182 Sum_probs=191.1
Q ss_pred ChhhhcCCCCcCcccCCCCCCCccccCCCCCCC--CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHH-HcCCCEEEecCC
Q 021235 27 SWASHLAPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAV-AQGADCIITIGG 103 (315)
Q Consensus 27 ~~~~~l~~~p~~r~~~~~~~TPL~~~~~~~L~~--g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~-~~G~~~vVt~g~ 103 (315)
+..+.....+ ++...+++|||++ +++|++ |++||+|+|++|| +||||+|++.+++.++. +.+.++||++
T Consensus 23 ~~~~i~~a~~--~i~~~i~~TPL~~--l~~l~~~~g~~i~~K~E~~~p--tGSfKdR~a~~~i~~a~~~~~~~~vv~~-- 94 (342)
T 2gn0_A 23 AIEDILEAKK--RLAGKIYKTGMPR--SNYFSERCKGEIFLKFENMQR--TGSFKIRGAFNKLSSLTEAEKRKGVVAC-- 94 (342)
T ss_dssp CHHHHHHHHH--HHTTTSCCCCCCB--CHHHHHHHTSEEEEEEGGGSG--GGBTHHHHHHHHHHHSCHHHHHTCEEEE--
T ss_pred CHHHHHHHHH--HHhhhcCCCCceE--chhhHHHhCCEEEEEEccCCC--cCChHHHHHHHHHHHHHHhcCCCEEEEE--
Confidence 4444444434 6777789999999 777766 8899999999998 69999999999999875 3556789976
Q ss_pred chhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCC
Q 021235 104 IQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGR 183 (315)
Q Consensus 104 s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~ 183 (315)
|+||||+|+|++|+++|++|++|||+..+ ..|+.+++.+||+|++++.. |++ ..+ .++++.++.+
T Consensus 95 ssGN~g~alA~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~-~~~-----~~~-~a~~l~~~~~ 159 (342)
T 2gn0_A 95 SAGNHAQGVSLSCAMLGIDGKVVMPKGAP--------KSKVAATCDYSAEVVLHGDN-FND-----TIA-KVSEIVETEG 159 (342)
T ss_dssp CSSHHHHHHHHHHHHHTCCEEEEECTTSC--------HHHHHHHHHHSCEEEECCSS-HHH-----HHH-HHHHHHHHHC
T ss_pred CCChHHHHHHHHHHHcCCCEEEEECCCCC--------HHHHHHHHHcCCEEEEECCC-HHH-----HHH-HHHHHHHhcC
Confidence 57999999999999999999999998864 35899999999999999874 653 222 3344444332
Q ss_pred CcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhH
Q 021235 184 RPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFY 263 (315)
Q Consensus 184 ~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~ 263 (315)
.++++. +.|+....||.+++.||++|+. .+|+||+|+|||||++|++.++|+.+|.+||+||++.+++.+..
T Consensus 160 -~~~~~~-~~n~~~~~g~~t~~~Ei~~q~~------~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~ 231 (342)
T 2gn0_A 160 -RIFIPP-YDDPKVIAGQGTIGLEIMEDLY------DVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQAENVHGMAA 231 (342)
T ss_dssp -CEECCS-SSSHHHHHHHHHHHHHHHHHCT------TCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTBCHHHH
T ss_pred -CEEeCC-CCCHHHHHHHHHHHHHHHHHcC------CCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEEEeCCChhHHH
Confidence 344432 3378899999999999999984 49999999999999999999999999999999999999865432
Q ss_pred HH----------HHHHHhhhcCC-----------CCCCCeEEecCCcccchHHHHHH
Q 021235 264 DY----------TQGLLDGLNAG-----------VDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 264 ~~----------i~~l~~g~~~~-----------~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
.. ...++++++.. ...|+++.|+|.+...++..+..
T Consensus 232 s~~~g~~~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 288 (342)
T 2gn0_A 232 SYYTGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQ 288 (342)
T ss_dssp HHHHTSCCCCCSSCCSCGGGCCSSCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHH
T ss_pred HHHcCCccccCCCCccccccCCCCccHHHHHHHHHcCCEEEEECHHHHHHHHHHHHH
Confidence 10 23456666642 13588999999998888887764
No 24
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=100.00 E-value=3.3e-39 Score=304.70 Aligned_cols=232 Identities=17% Similarity=0.195 Sum_probs=184.4
Q ss_pred cccCCCCCCCccccCCCCCCC--CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHH-HcCCCEEEecCCchhHHHHHHHHH
Q 021235 39 VFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAV-AQGADCIITIGGIQSNHCRAAAVA 115 (315)
Q Consensus 39 r~~~~~~~TPL~~~~~~~L~~--g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~-~~G~~~vVt~g~s~GNhg~alA~a 115 (315)
++...+++|||++ +++|++ |++||+|+|++|| +||||+|++.+++.++. +++.++||++ |+||||+|+|++
T Consensus 19 ~i~~~i~~TPL~~--~~~l~~~~g~~i~~K~E~~~p--tGS~KdRga~~~i~~~~~~~~~~~vv~~--ssGN~g~alA~~ 92 (323)
T 1v71_A 19 RIKKFANKTPVLT--SSTVNKEFVAEVFFKCENFQK--MGAFKFRGALNALSQLNEAQRKAGVLTF--SSGNHAQAIALS 92 (323)
T ss_dssp HHTTTSCCCCEEC--CHHHHHHHTSEEEEEEGGGSG--GGBTHHHHHHHHHTTCCHHHHHHCEEEC--CSSHHHHHHHHH
T ss_pred HHhccCCCCCceE--hHhhHHHhCCeEEEEecCCCC--cCCHHHHHHHHHHHHHHHhcCCCeEEEe--CCCcHHHHHHHH
Confidence 5666779999999 777766 8899999999999 69999999999987654 2455678976 569999999999
Q ss_pred HHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCCch
Q 021235 116 AKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNS 195 (315)
Q Consensus 116 a~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~ 195 (315)
|+++|++|++|||+..+ ..|+.+++.|||+|++++.. |++. .+.++++.++.+ .++++. +.|+
T Consensus 93 a~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~-~~~~------~~~a~~l~~~~~-~~~i~~-~~n~ 155 (323)
T 1v71_A 93 AKILGIPAKIIMPLDAP--------EAKVAATKGYGGQVIMYDRY-KDDR------EKMAKEISEREG-LTIIPP-YDHP 155 (323)
T ss_dssp HHHTTCCEEEEEETTCC--------HHHHHHHHHTTCEEEEECTT-TTCH------HHHHHHHHHHHT-CBCCCS-SSSH
T ss_pred HHHcCCCEEEECCCCCc--------HHHHHHHHHcCCEEEEECCC-HHHH------HHHHHHHHHhcC-CEecCC-CCCc
Confidence 99999999999999874 35899999999999999874 5432 123344544433 344544 4789
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHHHH---------
Q 021235 196 IGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYT--------- 266 (315)
Q Consensus 196 ~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~~i--------- 266 (315)
....||.+++.||++|+. .+|+||+|+|||||++|++.++|+.+|++||+||++.+++.+.....
T Consensus 156 ~~~~g~~t~~~Ei~~q~~------~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~~~~g~~~~~~~ 229 (323)
T 1v71_A 156 HVLAGQGTAAKELFEEVG------PLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEAGNDGQQSFRKGSIVHIDT 229 (323)
T ss_dssp HHHHHHTHHHHHHHHHHC------CCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCHHHHHHHHTSCCCCCC
T ss_pred chhhhHhHHHHHHHHhcC------CCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEeCCCchHHHHHHcCCceecCC
Confidence 999999999999999984 48999999999999999999999999999999999999875532211
Q ss_pred -HHHHhhhcCC-----------CCCCCeEEecCCcccchHHHHHH
Q 021235 267 -QGLLDGLNAG-----------VDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 267 -~~l~~g~~~~-----------~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
..++++++.. ...++++.|+|.+...++..+..
T Consensus 230 ~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~ 274 (323)
T 1v71_A 230 PKTIADGAQTQHLGNYTFSIIKEKVDDILTVSDEELIDCLKFYAA 274 (323)
T ss_dssp CCCSCTTSCCSSCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHH
T ss_pred CCcccccccCCCCcHHHHHHHHHhCCEEEEECHHHHHHHHHHHHH
Confidence 2345555542 13688999999988888877764
No 25
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=100.00 E-value=1.5e-39 Score=305.23 Aligned_cols=234 Identities=16% Similarity=0.094 Sum_probs=184.9
Q ss_pred cccCCCCCCCccccCCCCCCC--CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEecCCchhHHHHHHHHHH
Q 021235 39 VFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAA 116 (315)
Q Consensus 39 r~~~~~~~TPL~~~~~~~L~~--g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa 116 (315)
|+....++|||++ +++|++ |++||+|+|++|| +||||+|.+.+++.++. +.++||++ |+||||+|+|++|
T Consensus 13 ~i~~~~~~TPL~~--~~~l~~~~g~~i~~K~E~~~p--tgSfKdR~a~~~i~~l~--~~~~vv~~--ssGN~g~alA~~a 84 (311)
T 1ve5_A 13 RIAPYTHRTPLLT--SRLLDGLLGKRLLLKAEHLQK--TGSFKARGALSKALALE--NPKGLLAV--SSGNHAQGVAYAA 84 (311)
T ss_dssp HHGGGSCCCCEEE--CHHHHHHTTSEEEEEEGGGSG--GGBTHHHHHHHHHHHSS--SCCCEEEE--CSSHHHHHHHHHH
T ss_pred HHhccCCCCCcee--chhhHHhhCCeEEEEecCCCC--cCCcHHHHHHHHHHHhc--CCCeEEEE--CCCcHHHHHHHHH
Confidence 6667789999999 677765 7899999999998 79999999999998876 66789976 4699999999999
Q ss_pred HHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchh
Q 021235 117 KYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSI 196 (315)
Q Consensus 117 ~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~ 196 (315)
+++|++|++|||+..+ ..|+++++.+||+|+.++.. |++. .+ .++++.++.+ .++++. +.|+.
T Consensus 85 ~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~-~~~~-----~~-~a~~~~~~~~-~~~~~~-~~n~~ 147 (311)
T 1ve5_A 85 QVLGVKALVVMPEDAS--------PYKKACARAYGAEVVDRGVT-AKNR-----EE-VARALQEETG-YALIHP-FDDPL 147 (311)
T ss_dssp HHHTCCEEEECCCC----------CCHHHHHHHTTCEEECTTCC-TTTH-----HH-HHHHHHHHHC-CEECCS-SSSHH
T ss_pred HHcCCCEEEEECCCCC--------HHHHHHHHHcCCEEEEECCC-HHHH-----HH-HHHHHHHhcC-cEecCC-CCCcc
Confidence 9999999999999864 24899999999999998864 6542 12 2334444332 344432 33899
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHH-----------H
Q 021235 197 GTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYD-----------Y 265 (315)
Q Consensus 197 ~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~-----------~ 265 (315)
..+||.+++.||++|+.+. +.++|+||+|+|||||++|++.++|+.+|++||+||++.+++.+... .
T Consensus 148 ~~~g~~t~~~Ei~~q~~~~--~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~~~~g~~~~~~~~ 225 (311)
T 1ve5_A 148 VIAGQGTAGLELLAQAGRM--GVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEAADDAKRSLEAGRILRLEAP 225 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHH--TCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCHHHHHHHHTSCCCCSSC
T ss_pred hhhhccHHHHHHHHHHHhc--CCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEeCCChHHHHHHHcCCccccCCC
Confidence 9999999999999999531 13699999999999999999999999999999999999987654321 1
Q ss_pred HHHHHhhhcCC-----------CCCCCeEEecCCcccchHHHHHH
Q 021235 266 TQGLLDGLNAG-----------VDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 266 i~~l~~g~~~~-----------~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
+..++++++.. ...++++.|+|.+...++..+..
T Consensus 226 ~~~i~~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~ 270 (311)
T 1ve5_A 226 PRTRADGVRTLSLGERTFPILRERVDGILTVSEEALLEAERLLFT 270 (311)
T ss_dssp CCCSCGGGCCSSCCTTTHHHHHHHCCEEEEECHHHHHHHHHHHHH
T ss_pred CCeeeCcCCCCCccHHHHHHHHhcCCEEEEECHHHHHHHHHHHHH
Confidence 34466666642 13588999999988888887764
No 26
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=100.00 E-value=4e-38 Score=315.52 Aligned_cols=238 Identities=21% Similarity=0.126 Sum_probs=188.6
Q ss_pred cccCCCCCCCccccCCCCCCC--C--CeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCC----CEEEecCCchhHHHH
Q 021235 39 VFSLGHFPTPIHKWNLPNLPH--N--TEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGA----DCIITIGGIQSNHCR 110 (315)
Q Consensus 39 r~~~~~~~TPL~~~~~~~L~~--g--~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~----~~vVt~g~s~GNhg~ 110 (315)
.+...+++|||++ +++|++ | ++||+|+|++|| +||||+|++.+++.+|+++|. ++||+. |+||||+
T Consensus 53 ~i~~~ig~TPl~~--l~~l~~~~g~~~~i~~K~E~~~p--tGS~K~R~a~~~i~~a~~~g~~~~g~~vv~~--ssGN~g~ 126 (527)
T 3pc3_A 53 NILEVIGCTPLVK--LNNIPASDGIECEMYAKCEFLNP--GGSVKDRIGYRMVQDAEEQGLLKPGYTIIEP--TSGNTGI 126 (527)
T ss_dssp SGGGGSSCCCEEE--CCSHHHHTTCCSEEEEEEGGGST--TSBTTHHHHHHHHHHHHHHTCCCTTCEEEEE--CSSHHHH
T ss_pred hHHhhcCCCCcEE--cchhhhhcCCCcEEEEEeccCCC--CCCHHHHHHHHHHHHHHHcCCCCCCCEEEEe--CCCHHHH
Confidence 4556789999999 788765 5 799999999999 699999999999999999997 788874 6799999
Q ss_pred HHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCC-cccccChHHHHHHHHHHHHHhCCCcEEeC
Q 021235 111 AAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIP 189 (315)
Q Consensus 111 alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~~~~~y~ip 189 (315)
|+|++|+.+|++|+||||+..+ ..|+.+++.|||+|+.++.. .|++.. .. .+.++++.++.+..|+ +
T Consensus 127 a~A~~a~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~v~~~~~~~~~~~~~--~~-~~~a~~~~~~~~~~~~-~ 194 (527)
T 3pc3_A 127 GLAMACAVKGYKCIIVMPEKMS--------NEKVSALRTLGAKIIRTPTEAAYDSPE--GL-IYVAQQLQRETPNSIV-L 194 (527)
T ss_dssp HHHHHHHHHTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEECTTSCTTSTT--SH-HHHHHHHHHHSSSEEC-C
T ss_pred HHHHHHHHhCCeEEEEEcCCCC--------HHHHHHHHHCCCEEEEeCCCCCcccHH--HH-HHHHHHHHHhCCCcEe-c
Confidence 9999999999999999999764 35899999999999999863 465421 12 2234456655444454 4
Q ss_pred CCCCchh-hHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHHHH--
Q 021235 190 VGGSNSI-GTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYT-- 266 (315)
Q Consensus 190 ~g~~n~~-~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~~i-- 266 (315)
.++.|+. ...||.+++.||++|+. ..+|+||+|+|||||++|++.++|+..|+++|+||++.+++.+.....
T Consensus 195 ~~~~n~~n~~~g~~t~~~Ei~~q~~-----~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~~~~~~~~~~~~~~ 269 (527)
T 3pc3_A 195 DQYRNAGNPLAHYDGTAAEILWQLD-----NKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGSILARPAELNK 269 (527)
T ss_dssp CTTTCTHHHHHHHHTHHHHHHHHTT-----TCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTCCCSSSGGGGC
T ss_pred CCCCCcchHHHHHHHHHHHHHHhcC-----CCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCcccccchhhcC
Confidence 4455664 45689999999999985 369999999999999999999999999999999999999875432111
Q ss_pred ----HHHHhhhcCC--------CCCCCeEEecCCcccchHHHHHH
Q 021235 267 ----QGLLDGLNAG--------VDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 267 ----~~l~~g~~~~--------~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
...+++++.+ ...|+++.|+|.+...++..+..
T Consensus 270 ~~~~~~~~~gi~~~~~p~~~~~~~~d~~~~V~d~e~~~a~r~l~~ 314 (527)
T 3pc3_A 270 TDVQFYEVEGIGYDFPPTVFDDTVVDVWTKIGDSDCFPMSRRLNA 314 (527)
T ss_dssp CSCCCCSCCSCCCSSCCTTCCGGGCCEEEEECGGGTHHHHHHHHH
T ss_pred CCCCceeccccCCCCCCcccchhhCcEEEEECHHHHHHHHHHHHH
Confidence 1124455542 14688999999999988887764
No 27
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=100.00 E-value=1.3e-38 Score=298.12 Aligned_cols=230 Identities=18% Similarity=0.183 Sum_probs=182.8
Q ss_pred cCCCCCCCccccCCCCCCCCCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCC--CEEEecCCchhHHHHHHHHHHHH
Q 021235 41 SLGHFPTPIHKWNLPNLPHNTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGA--DCIITIGGIQSNHCRAAAVAAKY 118 (315)
Q Consensus 41 ~~~~~~TPL~~~~~~~L~~g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~--~~vVt~g~s~GNhg~alA~aa~~ 118 (315)
.+..++|||++ +++|+ .+||+|+|++|| +||||+|++.+++.+++++|. ++||++ |+||||+|+|++|++
T Consensus 15 ~~~~~~TPL~~--l~~l~--~~v~~K~E~~~p--tGSfK~R~a~~~l~~a~~~g~~~~~vv~a--SsGN~g~a~A~aa~~ 86 (303)
T 1o58_A 15 ERLIGSTPIVR--LDSID--SRIFLKLEKNNP--GGSVKDRPALFMILDAEKRGLLKNGIVEP--TSGNMGIAIAMIGAK 86 (303)
T ss_dssp HHHSCCCCEEE--CTTTC--TTEEEEEGGGST--TSBTTHHHHHHHHHHHHHTTCCTTCEEEE--CSSHHHHHHHHHHHH
T ss_pred hhccCCCCeEE--CccCC--ceEEEEecCCCC--CCChHHHHHHHHHHHHHHcCCCCCCEEEE--CchHHHHHHHHHHHH
Confidence 45678999999 78886 799999999998 799999999999999998887 678854 679999999999999
Q ss_pred cCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCC-cccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhh
Q 021235 119 LNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIG 197 (315)
Q Consensus 119 lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~ 197 (315)
+|++|++|||...+ ..|+++++.+||+|++++.. .|++ ..+ .++++.++. +.|+ +.++.|+.+
T Consensus 87 ~G~~~~iv~p~~~~--------~~k~~~~~~~GA~V~~~~~~~~~~~-----~~~-~a~~~~~~~-~~~~-~~~~~n~~~ 150 (303)
T 1o58_A 87 RGHRVILTMPETMS--------VERRKVLKMLGAELVLTPGELGMKG-----AVE-KALEISRET-GAHM-LNQFENPYN 150 (303)
T ss_dssp HTCCEEEEEETTSC--------HHHHHHHHHTTCEEEEECGGGHHHH-----HHH-HHHHHHHHH-CCBC-CCTTTCHHH
T ss_pred cCCcEEEEECCCCC--------HHHHHHHHHcCCEEEEECCCCCHHH-----HHH-HHHHHHHhc-CeEe-CCCCCCHHH
Confidence 99999999998864 35899999999999999863 2543 222 344444433 3444 456678887
Q ss_pred HH-HHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCC-CeEEEEeccCCchhhHH-HHHHHHhhhc
Q 021235 198 TW-GYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLK-AKVHAFSVCDDPDYFYD-YTQGLLDGLN 274 (315)
Q Consensus 198 ~~-G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~-~rVigV~~~g~~~~~~~-~i~~l~~g~~ 274 (315)
.. ||.+++.||++|+. .++|+||+|+|+|||++|++.++|+.+|+ +||+||++.+++.+... .....+++++
T Consensus 151 ~~~g~~t~~~Ei~~q~~-----~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~~~~~~~~~g~~~~~~~~gi~ 225 (303)
T 1o58_A 151 VYSHQFTTGPEILKQMD-----YQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQPGKHAIQGIG 225 (303)
T ss_dssp HHHHHHTHHHHHHHHTT-----TCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEETTSCTTTTCCCCCCCCTTSC
T ss_pred HHHHHHHHHHHHHHHcC-----CCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEEecCCCccccCCCCCCeecCcCC
Confidence 65 68999999999985 25999999999999999999999998899 99999999998654311 1112344544
Q ss_pred CC--------CCCCCeEEecCCcccchHHHHHH
Q 021235 275 AG--------VDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 275 ~~--------~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
.. ...|+++.|+|.+...++..+..
T Consensus 226 ~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 258 (303)
T 1o58_A 226 AGFVPKILDRSVIDEVITVEDEEAYEMARYLAK 258 (303)
T ss_dssp CSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHhCCeEEEECHHHHHHHHHHHHH
Confidence 31 14678999999998888887765
No 28
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=100.00 E-value=3.4e-39 Score=320.80 Aligned_cols=241 Identities=19% Similarity=0.211 Sum_probs=190.8
Q ss_pred hcCCCCcCcccCCCCCCCccccCCCCCCC--CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHH-cCCCEEEecCCchhH
Q 021235 31 HLAPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVA-QGADCIITIGGIQSN 107 (315)
Q Consensus 31 ~l~~~p~~r~~~~~~~TPL~~~~~~~L~~--g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~-~G~~~vVt~g~s~GN 107 (315)
.+..+-..++...+++|||++ +++|++ |++||+|+|++|| +||||+|++.+++.++.+ .+..+||++ |+||
T Consensus 16 ~~~~i~~a~i~~~i~~TPL~~--l~~Ls~~~g~~V~lK~E~lqP--tgSfKdRgA~n~i~~l~~~~~~~gVV~a--SsGN 89 (514)
T 1tdj_A 16 YLRAVLRAPVYEAAQVTPLQK--MEKLSSRLDNVILVKREDRQP--VHSFKLRGAYAMMAGLTEEQKAHGVITA--SAGN 89 (514)
T ss_dssp HHHHHHHCCGGGTCCCCCEEE--CHHHHHHTTSEEEEECGGGST--TSSSTHHHHHHHHHTTTTSSCSSSCEEE--ECSS
T ss_pred hHHHHHHHhHhcccCCCCcEE--chhhHHhhCCeEEEEECCCCC--cccHHHHHHHHHHHHHHHhcCCCEEEEE--CCcH
Confidence 444444447777889999999 777765 8999999999998 699999999999987753 345678876 4599
Q ss_pred HHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCCCcEE
Q 021235 108 HCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYV 187 (315)
Q Consensus 108 hg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ 187 (315)
||+|+|++|+++|++|+||||..+| ..|+++++.+||+|++++. .|+++ .+ .++++.++.+..|+
T Consensus 90 hg~avA~aa~~lGi~~~IvmP~~~p--------~~Kv~~~r~~GAeVvlv~~-~~dda-----~~-~a~ela~e~g~~~v 154 (514)
T 1tdj_A 90 HAQGVAFSSARLGVKALIVMPTATA--------DIKVDAVRGFGGEVLLHGA-NFDEA-----KA-KAIELSQQQGFTWV 154 (514)
T ss_dssp SHHHHHHHHHHTTCCEEEECCSSCC--------HHHHHHHHHHSCEEECCCS-SHHHH-----HH-HHHHHHHHHCCEEC
T ss_pred HHHHHHHHHHHcCCcEEEEECCCCC--------HHHHHHHHHCCCEEEEECC-CHHHH-----HH-HHHHHHHhcCCEee
Confidence 9999999999999999999999875 3589999999999999886 47642 22 33445444333343
Q ss_pred eCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHH---
Q 021235 188 IPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYD--- 264 (315)
Q Consensus 188 ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~--- 264 (315)
.|+ .|+..+.|+.+++.||++|++ .+|+||+|+|||||++|++.++|+.+|++|||||++.+++.+...
T Consensus 155 ~pf--dnp~~iaGqgTig~EI~eQl~------~~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgVep~~a~~l~~sl~~ 226 (514)
T 1tdj_A 155 PPF--DHPMVIAGQGTLALELLQQDA------HLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSACLKAALDA 226 (514)
T ss_dssp CSS--CCHHHHHHHHHHHHHHHHHCT------TCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTTCHHHHHHHH
T ss_pred CCC--CCHHHHHHHHHHHHHHHHHCC------CCCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEEeccCChhHHHHHhc
Confidence 343 378888899999999999985 399999999999999999999999999999999999998765422
Q ss_pred -------HHHHHHhhhcC-----------CCCCCCeEEecCCcccchHHHHHHH
Q 021235 265 -------YTQGLLDGLNA-----------GVDSRDIVNIQNVSVYMTFKNILMN 300 (315)
Q Consensus 265 -------~i~~l~~g~~~-----------~~~~~dvv~v~e~~~~~~~~~~~~~ 300 (315)
.+..+++|+++ ....|+++.|+|.+++.+++.++.+
T Consensus 227 G~~~~l~~v~tiadGiav~~~g~~~~~l~~~~vd~~v~Vsd~ei~~ai~~L~~~ 280 (514)
T 1tdj_A 227 GHPVDLPRVGLFAEGVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKDLFED 280 (514)
T ss_dssp TSCCCCSCCCSSSSTTCCSSCCCHHHHHHTTSCCEEEEECHHHHHHHHHHHHHH
T ss_pred CCeeecCCccccccchhcCCCChHHHHHHHHhCCeEEEECHHHHHHHHHHHHHH
Confidence 12334555554 1357899999999999999988653
No 29
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=100.00 E-value=2.1e-37 Score=303.18 Aligned_cols=238 Identities=17% Similarity=0.122 Sum_probs=182.0
Q ss_pred cccCCCCCCCccccCCCCCCC--C--CeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCC----CEEEecCCchhHHHH
Q 021235 39 VFSLGHFPTPIHKWNLPNLPH--N--TEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGA----DCIITIGGIQSNHCR 110 (315)
Q Consensus 39 r~~~~~~~TPL~~~~~~~L~~--g--~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~----~~vVt~g~s~GNhg~ 110 (315)
++...+++|||++ +++|++ | ++||+|+|++|| +||||+|++.+++.+|+++|. ++||++ |+||||+
T Consensus 101 ~i~~~ig~TPLv~--l~~Ls~~~G~~~~v~lK~E~~np--tGSfKdR~a~~~i~~a~~~G~l~~g~tVV~a--SsGN~G~ 174 (435)
T 1jbq_A 101 DILKKIGDTPMVR--INKIGKKFGLKCELLAKCEFFNA--GGSVKDRISLRMIEDAERDGTLKPGDTIIEP--TSGNTGI 174 (435)
T ss_dssp SGGGGSSCCCEEE--CCSHHHHTTCCSEEEEEEGGGST--TSBTHHHHHHHHHHHHHHHTCSCTTCEEEEE--CSSHHHH
T ss_pred HHHhhCCCCCeEE--CcchhhHhCCCceEEEEECCCCC--cCCHHHHHHHHHHHHHHHcCCCCCCCEEEEe--CCCHHHH
Confidence 4556789999999 788765 5 699999999998 699999999999999999885 678865 5699999
Q ss_pred HHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCC-cccccChHHHHHHHHHHHHHhCCCcEEeC
Q 021235 111 AAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIP 189 (315)
Q Consensus 111 alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~-~~~~~~~~~~~~~~~~~l~~~~~~~y~ip 189 (315)
|+|++|+++|++|+||||+..+ ..|+.+++.|||+|++++.. .|++.. .. .+.++++.++.++.|+++
T Consensus 175 AlA~aaa~~Gi~~~IvmP~~~s--------~~k~~~l~~~GAeVv~v~~~~~~d~~~--~~-~~~a~~la~~~~~~~~i~ 243 (435)
T 1jbq_A 175 GLALAAAVRGYRCIIVMPEKMS--------SEKVDVLRALGAEIVRTPTNARFDSPE--SH-VGVAWRLKNEIPNSHILD 243 (435)
T ss_dssp HHHHHHHHHTCEEEEEECSCCC--------HHHHHHHHHTTCEEEECCC-------C--CH-HHHHHHHHHHSTTEECCC
T ss_pred HHHHHHHHcCCeEEEEeCCCCC--------HHHHHHHHhCCCEEEEecCCCCcchHH--HH-HHHHHHHHHhcCCeEEeC
Confidence 9999999999999999999874 35899999999999999753 355421 12 223445666555566665
Q ss_pred CCCCchhh-HHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHHHH--
Q 021235 190 VGGSNSIG-TWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYT-- 266 (315)
Q Consensus 190 ~g~~n~~~-~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~~i-- 266 (315)
++.|+.+ ..||.+++.||++|+. .++|+||+|+|||||++|++.++|+..|++|||||++.++..+.....
T Consensus 244 -q~~n~~n~~ag~~t~a~EI~eQl~-----~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep~gs~~~~~~~l~~ 317 (435)
T 1jbq_A 244 -QYRNASNPLAHYDTTADEILQQCD-----GKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQ 317 (435)
T ss_dssp -TTTCTHHHHHHHHTHHHHHHHHHT-----TCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTCSCSSSGGGGC
T ss_pred -ccCCcccHHHHHHHHHHHHHHHcC-----CCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEecCCchhhchhhhhc
Confidence 2334432 3578899999999995 368999999999999999999999999999999999999864321110
Q ss_pred ----HHHHhhhcCC--------CCCCCeEEecCCcccchHHHHHH
Q 021235 267 ----QGLLDGLNAG--------VDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 267 ----~~l~~g~~~~--------~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
...+++++.+ ...|+++.|+|.+...++..+..
T Consensus 318 ~~~~~~~~~gig~~~~~~~l~~~~vd~~~~Vsd~ea~~a~r~La~ 362 (435)
T 1jbq_A 318 TEQTTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIA 362 (435)
T ss_dssp CSCCCCSCCSCCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHH
T ss_pred CCCcceeecccccCccchhhhhhhccceEEeCHHHHHHHHHHHHH
Confidence 1124444432 13578999999888888777664
No 30
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=100.00 E-value=4.1e-37 Score=298.42 Aligned_cols=232 Identities=16% Similarity=0.167 Sum_probs=180.8
Q ss_pred CCCCCccccCCCCCCC--C-CeEEEEeCCCC-CCCCchhHHHHHHHHHHHHHH------------------cCCC-EEEe
Q 021235 44 HFPTPIHKWNLPNLPH--N-TEVWLKRDDLS-GMQLSGNKVRKLEFLMADAVA------------------QGAD-CIIT 100 (315)
Q Consensus 44 ~~~TPL~~~~~~~L~~--g-~~v~vKrEdl~-~~~~gg~K~R~l~~ll~~a~~------------------~G~~-~vVt 100 (315)
.++|||++ +++|++ | .+||+|+|++| | +||||+|++.+++.++++ ++.+ +||+
T Consensus 42 ~~~TPL~~--~~~l~~~~g~~~i~~K~E~~~~p--tgSfK~Rga~~~i~~~~~~~~G~~~~~l~~e~l~~~~~~~~~vv~ 117 (398)
T 4d9i_A 42 YRPTPLCA--LDDLANLFGVKKILVKDESKRFG--LNAFXMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFAT 117 (398)
T ss_dssp CCCCCEEE--CHHHHHHHTSSEEEEEEGGGSTT--TTBSTHHHHHHHHHHHHHHHHTCCGGGCCHHHHHHCCSCCCEEEE
T ss_pred CCCCCcee--hHHHHHHhCCCcEEEEECCCCCC--CCcchhhhhHHHHHHHHHHhhcccccccchhhhhhhccCCCEEEE
Confidence 37999999 788876 7 59999999999 7 799999999999988842 3456 8887
Q ss_pred cCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHH
Q 021235 101 IGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLK 180 (315)
Q Consensus 101 ~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~ 180 (315)
+|+||||+|+|++|+++|++|+||||+..+ ..|+.+++.+||+|+.++. .|++ .++ .++++.+
T Consensus 118 --aSsGNhg~a~A~aa~~~G~~~~iv~p~~~~--------~~k~~~~~~~GA~Vv~v~~-~~~~-----a~~-~a~~~~~ 180 (398)
T 4d9i_A 118 --TTDGNHGRGVAWAAQQLGQNAVIYMPKGSA--------QERVDAILNLGAECIVTDM-NYDD-----TVR-LTMQHAQ 180 (398)
T ss_dssp --ECSSHHHHHHHHHHHHHTCEEEEEECTTCC--------HHHHHHHHTTTCEEEECSS-CHHH-----HHH-HHHHHHH
T ss_pred --ECCCHHHHHHHHHHHHcCCCEEEEEeCCCC--------HHHHHHHHHcCCEEEEECC-CHHH-----HHH-HHHHHHH
Confidence 467999999999999999999999998864 3589999999999999987 4654 223 2334444
Q ss_pred hCCCcEEeCC----CCC--chhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcC--CCCCeEEE
Q 021235 181 EGRRPYVIPV----GGS--NSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLG--TLKAKVHA 252 (315)
Q Consensus 181 ~~~~~y~ip~----g~~--n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~--~~~~rVig 252 (315)
+. ..|+++. ++. ++....||.+++.||++|+... +..+|+||+|+|+|||++|++.++++. .++++|+|
T Consensus 181 ~~-g~~~v~~~~~~g~~~~~~~~~~G~~t~~~Ei~~q~~~~--g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vig 257 (398)
T 4d9i_A 181 QH-GWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREM--GVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSII 257 (398)
T ss_dssp HH-TCEECCSSCBTTBCHHHHHHHHHHHHHHHHHHHHHHHT--TCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEE
T ss_pred Hc-CCEEecCcccCCcCCCCchhhhhHHHHHHHHHHHhhhc--CCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEE
Confidence 33 3577764 343 3678899999999999999742 235999999999999999999999765 47899999
Q ss_pred EeccCCchhhHH-----------HHHHHHhhhcCC-----------CCCCCeEEecCCcccchHHHHHH
Q 021235 253 FSVCDDPDYFYD-----------YTQGLLDGLNAG-----------VDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 253 V~~~g~~~~~~~-----------~i~~l~~g~~~~-----------~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
|++.+++.+... .+..+.++++.. ...++++.|+|.+...++..+..
T Consensus 258 Vep~~~~~~~~s~~~g~~~~~~~~~~tia~gl~~~~p~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~ 326 (398)
T 4d9i_A 258 VEPDKADCIYRSGVKGDIVNVGGDMATIMAGLACGEPNPLGWEILRNCATQFISCQDSVAALGMRVLGN 326 (398)
T ss_dssp EEETTSCHHHHHHHHTSCCCC------CCTTCCCSSCCHHHHHHHHHHCCEEEEECTHHHHHHHHHHHS
T ss_pred EEeCCCchHHHHHHcCCceecCCCCCceeccccCCCCCHHHHHHHHHcCCeEEEECHHHHHHHHHHHHH
Confidence 999998765321 345667777542 14688999999988888776653
No 31
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=100.00 E-value=6.3e-37 Score=300.82 Aligned_cols=241 Identities=14% Similarity=0.136 Sum_probs=184.9
Q ss_pred CcccCCCCCCCccccCCCCCC----C------CCeEEEEeCCCCCCCCchhHHHHHHHHHHH-----HHHcCC-------
Q 021235 38 HVFSLGHFPTPIHKWNLPNLP----H------NTEVWLKRDDLSGMQLSGNKVRKLEFLMAD-----AVAQGA------- 95 (315)
Q Consensus 38 ~r~~~~~~~TPL~~~~~~~L~----~------g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~-----a~~~G~------- 95 (315)
.+..+++++|||++ +++|+ + |.+||+|+|++||. +||||+|++.+++.+ |+++|.
T Consensus 70 ~~~~~g~~~TPL~~--~~~l~~~l~~~~g~~~~~~v~lK~E~~~p~-tGSfK~Rga~~~i~~l~~~~a~~~G~l~~g~~~ 146 (442)
T 3ss7_X 70 TAATGGIIESELVA--IPAMQKRLEKEYQQPISGQLLLKKDSHLPI-SGSIKARGGIYEVLAHAEKLALEAGLLTLDDDY 146 (442)
T ss_dssp GGGGTTCCCCCEEE--CHHHHHHHHHHHTCCCCSEEEEEEGGGCTT-TSBTHHHHHHHHHHHHHHHHHHHTTSCCTTSCG
T ss_pred hhccCCCCCCCcEE--hHhhhhHHHHhhCCCcCCeEEEeecCCCCC-CCCcHHHHHHHHHHHHhHHHHHHcCCCCCCcch
Confidence 34456778999999 67665 3 37999999999973 599999999998875 778885
Q ss_pred --------------CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCCc
Q 021235 96 --------------DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEE 161 (315)
Q Consensus 96 --------------~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~ 161 (315)
.+||+. |+||||+|+|++|+++|++|+||||..++ ..|+..++.|||+|+.++. .
T Consensus 147 ~~l~~~~~r~~~~~~~vv~a--SsGNhg~avA~~aa~~G~~~~Ivmp~~~~--------~~k~~~~r~~GA~Vv~v~~-~ 215 (442)
T 3ss7_X 147 SKLLSPEFKQFFSQYSIAVG--STGNLGLSIGIMSARIGFKVTVHMSADAR--------AWKKAKLRSHGVTVVEYEQ-D 215 (442)
T ss_dssp GGGGSHHHHHHHHTSEEEEE--CSSHHHHHHHHHHHHHTCEEEEEEETTSC--------HHHHHHHHHTTCEEEEESS-C
T ss_pred hhhhhhhhhhhccCcEEEEE--CCCHHHHHHHHHHHHhCCcEEEEECCCCC--------HHHHHHHHHCCCEEEEECC-C
Confidence 367754 67999999999999999999999999875 3589999999999999987 4
Q ss_pred ccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCC---CCCCCCeEEEeCCchhhHHHHH
Q 021235 162 YSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGT---GGVKFDDIVVACGSGGTIAGLS 238 (315)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~---~~~~~D~ivv~vGtGGt~aGl~ 238 (315)
|++ .++ .++++.++.+..|+++. ..++....||.+++.||++|+.+.+ ++..||+||+|+|+||+++|++
T Consensus 216 ~~~-----a~~-~a~~~a~~~~~~~~i~~-~n~~~~~~G~~t~g~Ei~eQl~~~g~~vD~~~Pd~VvvpvG~GG~~aGi~ 288 (442)
T 3ss7_X 216 YGV-----AVE-EGRKAAQSDPNCFFIDD-ENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVA 288 (442)
T ss_dssp HHH-----HHH-HHHHHHHTCTTEEECCT-TTCHHHHHHHHHHHHHHHHHHHHHTCCCBTTBCEEEEEECSSSHHHHHHH
T ss_pred HHH-----HHH-HHHHHHHhCCCceeCCC-CChHHHHHHHHHHHHHHHHHHHhhcCcccccCCCEEEEEeCCchHHHHHH
Confidence 654 223 34455555445677765 2234567999999999999996421 0124669999999999999999
Q ss_pred HHHhcC-CCCCeEEEEeccCCchhhHHHH----------------HHHHhhhcCC-----------CCCCCeEEecCCcc
Q 021235 239 LGSWLG-TLKAKVHAFSVCDDPDYFYDYT----------------QGLLDGLNAG-----------VDSRDIVNIQNVSV 290 (315)
Q Consensus 239 ~~~k~~-~~~~rVigV~~~g~~~~~~~~i----------------~~l~~g~~~~-----------~~~~dvv~v~e~~~ 290 (315)
.++|+. +++++|+||++.+++.+..... ..++++++.. ...++++.|+|.++
T Consensus 289 ~~lk~~~~~~v~vigVep~~~~~~~~~~~~G~~~~~~v~~~g~~~~TiAdgl~v~~~~~~~~~~~~~~~d~~~~Vsd~e~ 368 (442)
T 3ss7_X 289 FGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGFYTLSDQTM 368 (442)
T ss_dssp HHHHHHHGGGEEEEEEEETTCCHHHHHHHHSCGGGCBGGGGTCCCCCSCGGGCCSBCCSSHHHHHGGGCCEEEEECHHHH
T ss_pred HHHHHhcCCCCEEEEEEeCCchHHHHHHhcCCCceeeeccCCCchhhHHhhcCCCCCchhHHHHHHhhCCeEEEECHHHH
Confidence 999986 8999999999999876432211 1233344431 24688999999999
Q ss_pred cchHHHHHH
Q 021235 291 YMTFKNILM 299 (315)
Q Consensus 291 ~~~~~~~~~ 299 (315)
+.++..+..
T Consensus 369 ~~a~~~L~~ 377 (442)
T 3ss7_X 369 YDMLGWLAQ 377 (442)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998887765
No 32
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=100.00 E-value=4.7e-38 Score=301.90 Aligned_cols=238 Identities=18% Similarity=0.190 Sum_probs=186.0
Q ss_pred CCCCcCcccCCCCCCCccccCCCCCCC--CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHH-HcCCCEEEecCCchhHHH
Q 021235 33 APIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAV-AQGADCIITIGGIQSNHC 109 (315)
Q Consensus 33 ~~~p~~r~~~~~~~TPL~~~~~~~L~~--g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~-~~G~~~vVt~g~s~GNhg 109 (315)
..++..++...+++|||++ +++|++ |++||+|+|++|| +||||+|.+.+++.++. +.+.++||+++ +||||
T Consensus 47 ~~i~~~~i~~~i~~TPL~~--l~~l~~~~g~~i~~K~E~~~p--tgSfKdRga~~~i~~l~~~~~~~~vv~as--sGN~g 120 (366)
T 3iau_A 47 VDILASPVYDVAIESPLEL--AEKLSDRLGVNFYIKREDKQR--VFSFKLRGAYNMMSNLSREELDKGVITAS--AGNHA 120 (366)
T ss_dssp HHHHHCCGGGTCCCCCEEE--CHHHHHHHTSEEEEEEGGGST--TSBTTHHHHHHHHHTSCHHHHHHCEEEEC--SSHHH
T ss_pred HHHHHHHHhhhcCCCCcEE--hhhhhHhhCCEEEEEecCCCC--CcchHHHHHHHHHHHHHHhCCCCEEEEeC--CCHHH
Confidence 4455567778889999999 788876 8899999999998 69999999999887653 23346788764 49999
Q ss_pred HHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCCCcEEeC
Q 021235 110 RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIP 189 (315)
Q Consensus 110 ~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip 189 (315)
+|+|++|+++|++|++|||+..+ ..|+..++.+||+|+.++. .|+++ .+ .++++.++.+ .++++
T Consensus 121 ~a~A~aa~~~G~~~~iv~P~~~~--------~~k~~~~~~~GA~V~~v~~-~~~~~-----~~-~a~~~~~~~~-~~~i~ 184 (366)
T 3iau_A 121 QGVALAGQRLNCVAKIVMPTTTP--------QIKIDAVRALGGDVVLYGK-TFDEA-----QT-HALELSEKDG-LKYIP 184 (366)
T ss_dssp HHHHHHHHHTTCCEEEEECTTCC--------HHHHHHHHHTTCEEEECCS-SHHHH-----HH-HHHHHHHHHT-CEECC
T ss_pred HHHHHHHHHhCCceEEEeCCCCC--------HHHHHHHHHCCCeEEEECc-CHHHH-----HH-HHHHHHHhcC-CEecC
Confidence 99999999999999999999764 3579999999999999985 46542 22 2334443332 34443
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHH-----
Q 021235 190 VGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYD----- 264 (315)
Q Consensus 190 ~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~----- 264 (315)
. +.|+....||.+++.||++|+. .+|+||+|+|+|||++|++.++|..+++++|+||++.+++.+...
T Consensus 185 ~-~~n~~~i~g~~t~~~Ei~~q~~------~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigVe~~~~~~l~~~~~~g~ 257 (366)
T 3iau_A 185 P-FDDPGVIKGQGTIGTEINRQLK------DIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGVEPYGAASMTLSLHEGH 257 (366)
T ss_dssp S-SSSHHHHHHHHHHHHHHHHHCC------SEEEEEEECSSSHHHHHHHHHHHHHSTTSEEEEEEEGGGCHHHHHHHHTS
T ss_pred C-CCChHHHHHHHHHHHHHHHhcC------CCCEEEEccCchHHHHHHHHHHHHhCCCCeEEEEeecCChHHHHHHHcCC
Confidence 2 3478888999999999999983 599999999999999999999999999999999999998654321
Q ss_pred -----HHHHHHhhhcCC-----------CCCCCeEEecCCcccchHHHHHH
Q 021235 265 -----YTQGLLDGLNAG-----------VDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 265 -----~i~~l~~g~~~~-----------~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
.+..++++++.. ...++++.|+|.+...++..+..
T Consensus 258 ~~~~~~~~tia~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~ 308 (366)
T 3iau_A 258 RVKLSNVDTFADGVAVALVGEYTFAKCQELIDGMVLVANDGISAAIKDVYD 308 (366)
T ss_dssp CCEESCCCCSSGGGCCSSCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHH
T ss_pred CCcCCCccchhhhhcCCCCcHHHHHHHHhcCCCceeECHHHHHHHHHHHHH
Confidence 112344555531 13578999999998888877764
No 33
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=100.00 E-value=1.1e-34 Score=280.46 Aligned_cols=227 Identities=14% Similarity=0.092 Sum_probs=170.2
Q ss_pred CCCCccccCCCCCCC-CCeEEEEeCCCCCCCCchhHHHHHHHHHHH---HHHcCCCEEEecCCchhHHHHHHHHHHHHcC
Q 021235 45 FPTPIHKWNLPNLPH-NTEVWLKRDDLSGMQLSGNKVRKLEFLMAD---AVAQGADCIITIGGIQSNHCRAAAVAAKYLN 120 (315)
Q Consensus 45 ~~TPL~~~~~~~L~~-g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~---a~~~G~~~vVt~g~s~GNhg~alA~aa~~lG 120 (315)
.+|||++ +++|++ |.+||+|||++||. +||||+|++.+++.. +++.| ++||. +|+||||+|+|++|+++|
T Consensus 95 ~~TPL~~--l~~Ls~~g~~IylK~E~lnp~-tGS~K~R~a~~~i~~l~~a~~~g-~~Iv~--assGNhG~AlA~aaa~~G 168 (389)
T 1wkv_A 95 KPTPLVR--SRLQLPNGVRVWLKLEWYNPF-SLSVKDRPAVEIISRLSRRVEKG-SLVAD--ATSSNFGVALSAVARLYG 168 (389)
T ss_dssp CSCCEEE--CCCCCSTTEEEEEEEGGGSTT-TSBTTHHHHHHHHHHHTTTSCTT-CEEEE--ECCHHHHHHHHHHHHHTT
T ss_pred CCCCeEE--ccccccCCCeEEEEEcCCCCC-cCChHHHHHHHHHHHHHHHHhcC-CEEEE--ECCcHHHHHHHHHHHHcC
Confidence 6899999 788877 88999999999983 489999999999988 65667 67774 467999999999999999
Q ss_pred CeEEEEecCCCcccCCCCCccchHHHHHhCCCEEE-EEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhh-H
Q 021235 121 LDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE-LISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIG-T 198 (315)
Q Consensus 121 l~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~-~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~-~ 198 (315)
++|+||||+..+ ..|+.+++.+||+|+ .++.+.|+++ ++.+.+..++.+ .++++ ++.|+.. .
T Consensus 169 l~~~ivmp~~~~--------~~k~~~~~~~GAeVv~~v~~~~~~da-----~~~a~~~~~~~g--~~~~~-p~~N~~~~~ 232 (389)
T 1wkv_A 169 YRARVYLPGAAE--------EFGKLLPRLLGAQVIVDPEAPSTVHL-----LPRVMKDSKNEG--FVHVN-QFYNDANFE 232 (389)
T ss_dssp CEEEEEEETTSC--------HHHHHHHHHTTCEEEEETTCSSSGGG-----HHHHHHHHHHHC--CEECC-TTTCHHHHH
T ss_pred CeEEEEECCCCC--------HHHHHHHHHcCCEEEEEcCCCCHHHH-----HHHHHHHHHccC--cEecC-cCCChHHHH
Confidence 999999998764 247889999999999 7774456542 222222222333 34332 2334543 4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhH-HHH---HHHHhhhc
Q 021235 199 WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFY-DYT---QGLLDGLN 274 (315)
Q Consensus 199 ~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~-~~i---~~l~~g~~ 274 (315)
.||.+++.||++|+.+. +..||+||+|+|||||++|++.++++.+|++|||||++.+...... ..+ ..+..
T Consensus 233 ~~~~t~g~Ei~~Q~~~~--g~~~D~vv~~vG~GG~~~Gi~~~~k~~~p~vrvigVe~~~~~~l~Gi~~i~~~~~~~~--- 307 (389)
T 1wkv_A 233 AHMRGTAREIFVQSRRG--GLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPGIRRVETGMLWIN--- 307 (389)
T ss_dssp HHHHTHHHHHHHHHHHT--TCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEEEEEECTTCCCTTCCCGGGCCSHHH---
T ss_pred HHHHHHHHHHHHHHHhc--CCCCCEEEEeCCchHhHHHHHHHHHHhCCCCeEEEEecCCCCccccccccCCcchhhh---
Confidence 56778999999999642 3469999999999999999999999988999999999997642210 000 00110
Q ss_pred CCCCCC-CeEEecCCcccchHHHHHH
Q 021235 275 AGVDSR-DIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 275 ~~~~~~-dvv~v~e~~~~~~~~~~~~ 299 (315)
....| +++.|+|.+...++..+..
T Consensus 308 -~~~~dg~~~~Vsd~ea~~a~~~l~~ 332 (389)
T 1wkv_A 308 -MLDISYTLAEVTLEEAMEAVVEVAR 332 (389)
T ss_dssp -HSCCCCEEEEECHHHHHHHHHHHHH
T ss_pred -hheeccEEEEECHHHHHHHHHHHHH
Confidence 12356 8999999988888877754
No 34
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=6.1e-35 Score=284.87 Aligned_cols=239 Identities=18% Similarity=0.146 Sum_probs=173.6
Q ss_pred CCCCccccCCCCCCC---CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCC
Q 021235 45 FPTPIHKWNLPNLPH---NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNL 121 (315)
Q Consensus 45 ~~TPL~~~~~~~L~~---g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl 121 (315)
.+|||++ +++|++ |.+||+||||+|| +||||+|++.+++..+.++|.+.+|+. +|+||||+|+|++|+++|+
T Consensus 76 ~~TPL~~--~~~Ls~~~gg~~i~lK~E~l~p--tGSfK~R~a~~~i~~a~~~g~~~vI~~-~ssGNhg~avA~aaa~~Gi 150 (418)
T 1x1q_A 76 RPTPLYH--AKRLSEYWGGAQVFLKREDLLH--TGAHKINNTLGQALLARRMGKRRVIAE-TGAGQHGVSVATVAALFGL 150 (418)
T ss_dssp CSCCEEE--CHHHHHHHTSSEEEEEEGGGSG--GGBTTHHHHHHHHHHHHHHTCCEEEEE-CSSSHHHHHHHHHHHHHTC
T ss_pred CCCCcEE--hHHhHhhcCCceEEEEEccCCc--CccHHHHHHHHHHHHHHHcCCCEEEEe-cCchHHHHHHHHHHHHcCC
Confidence 5799999 777766 5899999999999 799999999999888888888877764 3459999999999999999
Q ss_pred eEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcC--CcccccChHHHHHHHHHHHHHhCCCcEEeCCCCC--chh-
Q 021235 122 DCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK--EEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS--NSI- 196 (315)
Q Consensus 122 ~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~--~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~--n~~- 196 (315)
+|+||||...+. ....|+.+++.+||+|+.++. ..|++ ..+.+.+.+.++.++.+++..++. +|.
T Consensus 151 ~~~I~mp~~~~~-----~~~~kv~~~~~~GA~Vv~v~~~~~~~~~-----a~~~a~~~~~~~~~~~~~i~~~~~n~~p~~ 220 (418)
T 1x1q_A 151 ECVVYMGEEDVR-----RQALNVFRMKLLGAEVRPVAAGSRTLKD-----ATNEAIRDWITNVRTTFYILGSVVGPHPYP 220 (418)
T ss_dssp EEEEEEEHHHHH-----TCHHHHHHHHHTTCEEEEECSTTSSHHH-----HHHHHHHHHHHTTTTEEECCCCSSSSTTHH
T ss_pred CEEEEECCCcch-----hhhHHHHHHHHCCCEEEEECCCCCCHHH-----HHHHHHHHHHHhCCCcEEEeCCccCCCCcH
Confidence 999999975321 013578999999999999985 23543 223333444554334455543432 332
Q ss_pred -hH-HHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcC-CCCCeEEEEeccCCchhh-------H---
Q 021235 197 -GT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLG-TLKAKVHAFSVCDDPDYF-------Y--- 263 (315)
Q Consensus 197 -~~-~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~-~~~~rVigV~~~g~~~~~-------~--- 263 (315)
.+ .||.+++.||++|+.+.. +..+|+||+|+|+||+++|++.++|+. +|++|||||++.++..+. .
T Consensus 221 ~~v~~gq~t~~~Ei~~Ql~~~~-~~~~D~vvvpvGgGG~~~Gi~~~~k~l~~p~~~vigVe~~g~~~~~~~~~~~l~~G~ 299 (418)
T 1x1q_A 221 MMVRDFQSVIGEEVKRQSLELF-GRLPDALIAAVGGGSNAIGLFAPFAYLPEGRPKLIGVEAAGEGLSTGRHAASIGAGK 299 (418)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHH-SSCCSEEEEECSSSSHHHHHHHHHHTSCTTCCEEEEEEECCTTSSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhhc-CCCCCEEEEecCCcHhHHHHHHHHHHhCCCCCeEEEEecCCcccccHHHHHHHHcCC
Confidence 23 488899999999985310 135899999999999999999999876 899999999999973211 0
Q ss_pred -------------------HHHHHHHhhhcCC-----------CCCCCeEEecCCcccchHHHHHH
Q 021235 264 -------------------DYTQGLLDGLNAG-----------VDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 264 -------------------~~i~~l~~g~~~~-----------~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
.....+++++... ...++++.|+|.+.+.++..+..
T Consensus 300 ~~~~~g~~~~~~~~~~g~~~~~~tia~gl~~~~~g~~~~~l~~~~~~~~~~Vsd~e~~~a~~~l~~ 365 (418)
T 1x1q_A 300 RGVLHGSYMYLLYDHDGQITPAHSVSAGLDYPGVGPEHSYYADAGVAEYASVTDEEALEGFKLLAR 365 (418)
T ss_dssp EEEETTEEEEBCCC----------------CSBCCHHHHHHHHHTSEEEEEECHHHHHHHHHHHHH
T ss_pred eeeeccccccccccccccccCCceeeeccCCCCCCHHHHHHHhccCeEEEEECHHHHHHHHHHHHH
Confidence 1123444444431 13478999999999999888765
No 35
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=100.00 E-value=6e-35 Score=281.80 Aligned_cols=238 Identities=17% Similarity=0.119 Sum_probs=175.5
Q ss_pred CCCCccccCCCCCCC--C-CeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCC
Q 021235 45 FPTPIHKWNLPNLPH--N-TEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNL 121 (315)
Q Consensus 45 ~~TPL~~~~~~~L~~--g-~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl 121 (315)
.+|||++ +++|++ | .+||+|+|++|| +||||+|++.+++..+.++|.+++|+. +|+||||+|+|++|+++|+
T Consensus 49 ~~TPL~~--~~~l~~~~g~~~i~~K~E~~~p--tGSfK~R~a~~~i~~a~~~g~~~vv~~-~ssGN~g~a~A~aa~~~G~ 123 (388)
T 1v8z_A 49 RPTPLYY--AKRLTEKIGGAKIYLKREDLVH--GGAHKTNNAIGQALLAKFMGKTRLIAE-TGAGQHGVATAMAGALLGM 123 (388)
T ss_dssp CSCCEEE--CHHHHHHHTSSEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTCCEEEEE-ESSSHHHHHHHHHHHHTTC
T ss_pred CCCCcee--hHhhHhhcCCceEEEEeccCCC--CCCHHHHHHHHHHHHHHHcCCCEEEEe-cCchHHHHHHHHHHHHcCC
Confidence 4699999 777766 5 899999999998 699999999999988888998888863 3459999999999999999
Q ss_pred eEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCC--cccccChHHHHHHHHHHHHHhCCCcEEeCCCCCch--h-
Q 021235 122 DCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE--EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNS--I- 196 (315)
Q Consensus 122 ~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~--~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~--~- 196 (315)
+|+||||.... +....|+.+++.+||+|+.++.. .|++ ..+.+.+.+.++.++.++++.++.|+ .
T Consensus 124 ~~~iv~p~~~~-----~~~~~~~~~~~~~GA~V~~~~~~~~~~~~-----a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~ 193 (388)
T 1v8z_A 124 KVDIYMGAEDV-----ERQKMNVFRMKLLGANVIPVNSGSRTLKD-----AINEALRDWVATFEYTHYLIGSVVGPHPYP 193 (388)
T ss_dssp EEEEEEEHHHH-----TTCHHHHHHHHHTTCEEEEECSTTSSHHH-----HHHHHHHHHHHHTTTEEECCCSSCSSTTHH
T ss_pred cEEEEEcCCch-----hhhhhHHHHHHHCCCEEEEECCCCCCHHH-----HHHHHHHHHHHhCCCceEecCCccCCCCch
Confidence 99999997521 11135789999999999999752 3432 22333333444433456676665443 2
Q ss_pred -hH-HHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhh-------HH---
Q 021235 197 -GT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYF-------YD--- 264 (315)
Q Consensus 197 -~~-~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~-------~~--- 264 (315)
.+ .||.+++.||++|+.++. +..+|+||+|+|||||++|++.+++ .+|.+|||||++.++..+. ..
T Consensus 194 ~~~~~~~~t~~~Ei~~q~~~~~-~~~~d~vvvpvG~GG~~aGi~~~~~-~~~~~~vigve~~~~~~~~~~~~~~l~~g~~ 271 (388)
T 1v8z_A 194 TIVRDFQSVIGREAKAQILEAE-GQLPDVIVACVGGGSNAMGIFYPFV-NDKKVKLVGVEAGGKGLESGKHSASLNAGQV 271 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-SSCCSEEEEECSSSHHHHHHHGGGT-TCTTSEEEEEEEEETBGGGTBSCCHHHHCEE
T ss_pred hHHHHHhHHHHHHHHHHHHHhc-CCCCCEEEEecCccHhHHHHHHHHh-hCCCceEEEEccCccccchhhhhHHHhcCCc
Confidence 22 378899999999995210 1358999999999999999999998 4899999999999875321 00
Q ss_pred -------------------HHHHHHhhhcC-----------CCCCCCeEEecCCcccchHHHHHH
Q 021235 265 -------------------YTQGLLDGLNA-----------GVDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 265 -------------------~i~~l~~g~~~-----------~~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
....+++++.. +...++++.|+|.+...++..+..
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~tia~gl~~~~~g~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~ 336 (388)
T 1v8z_A 272 GVFHGMLSYFLQDEEGQIKPTHSIAPGLDYPGVGPEHAYLKKIQRAEYVTVTDEEALKAFHELSR 336 (388)
T ss_dssp EEETTEEEEECBCTTSCBCCCCCSSTTSCCSBCCHHHHHHHHTTSEEEEEEEHHHHHHHHHHHHH
T ss_pred eeccccccccccccccccCCCceeeeccccCCCChhHHHHHhcCCcEEEEECHHHHHHHHHHHHH
Confidence 01122333322 123478999999998888887765
No 36
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=100.00 E-value=1.6e-34 Score=279.83 Aligned_cols=237 Identities=18% Similarity=0.144 Sum_probs=175.3
Q ss_pred CCCCccccCCCCCCC--CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCe
Q 021235 45 FPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLD 122 (315)
Q Consensus 45 ~~TPL~~~~~~~L~~--g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~ 122 (315)
.+|||++ +++|++ |.+||+|||++|| +||||+|.+.+++..+.++|.++||+. +|+||||+|+|++|+++|++
T Consensus 54 ~~TPL~~--~~~l~~~~g~~i~lK~E~l~p--tGSfK~R~a~~~~~~a~~~g~~~vi~e-~ssGNhg~a~A~aa~~~G~~ 128 (396)
T 1qop_B 54 RPTALTK--CQNITAGTRTTLYLKREDLLH--GGAHKTNQVLGQALLAKRMGKSEIIAE-TGAGQHGVASALASALLGLK 128 (396)
T ss_dssp CSCCEEE--CHHHHTTSSEEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTCCEEEEE-ESSSHHHHHHHHHHHHHTCE
T ss_pred CCCCcEE--hhhhhhccCCeEEEEeccCCC--CCcHHHHHHHHHHHHHHHcCcCEEEEe-cCchHHHHHHHHHHHHCCCc
Confidence 4699999 677765 7899999999999 799999999999988999999888873 24599999999999999999
Q ss_pred EEEEecCC-CcccCCCCCccchHHHHHhCCCEEEEEcCC--cccccChHHHHHHHHHHHHHhCCCcEEeCCCCC--chh-
Q 021235 123 CYLILRTS-KVLVDQDPGLIGNLLVERLVGAHIELISKE--EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS--NSI- 196 (315)
Q Consensus 123 ~~ivvp~~-~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~--~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~--n~~- 196 (315)
|+||||.. .+. ...|+.+++.+||+|+.++.+ .|++ ....+.+.+.++..+.++++.++. +|.
T Consensus 129 ~~i~mp~~~~~~------~~~~~~~~~~~GA~V~~v~~~~~~~~~-----a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~ 197 (396)
T 1qop_B 129 CRIYMGAKDVER------QSPNVFRMRLMGAEVIPVHSGSATLKD-----ACNEALRDWSGSYETAHYMLGTAAGPHPYP 197 (396)
T ss_dssp EEEEEEHHHHHH------CHHHHHHHHHTTCEEEEECSTTSSHHH-----HHHHHHHHHHHHTTTEEECCCSSCSSTTHH
T ss_pred EEEEEcCCchhh------hhhHHHHHHHCCCEEEEECCCCCCHHH-----HHHHHHHHHHhccCCcEEEeCCcCCCCCch
Confidence 99999985 321 134689999999999999752 3432 223333333444334566665433 332
Q ss_pred -hHH-HHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchh-------hHH---
Q 021235 197 -GTW-GYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDY-------FYD--- 264 (315)
Q Consensus 197 -~~~-G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~-------~~~--- 264 (315)
... ||.+++.||.+|+.+.. +..+|+||+|+|+||+++|++.+++ .+|.+|||||++.++..+ +..
T Consensus 198 ~~v~~g~~t~~~Ei~~Ql~~~~-~~~~d~vvvpvG~GG~~~Gi~~~~~-~~~~~~vigVe~~~~~~~~~~~~~~l~~g~~ 275 (396)
T 1qop_B 198 TIVREFQRMIGEETKAQILDKE-GRLPDAVIACVGGGSNAIGMFADFI-NDTSVGLIGVEPGGHGIETGEHGAPLKHGRV 275 (396)
T ss_dssp HHHHHTTTHHHHHHHHHHHHHH-SSCCSEEEEECSSSHHHHHHHGGGT-TCTTSEEEEEEEEETBGGGTBSCCHHHHSEE
T ss_pred HHHHHHHhHHHHHHHHHHHHhc-CCCCCEEEEcCCchHHHHHHHHHHh-cCCCCEEEEEeCCCccccchhhHHHHHcCCe
Confidence 233 67899999999994210 1468999999999999999999999 489999999999986421 111
Q ss_pred -------------------HHHHHHhhhcC-----------CCCCCCeEEecCCcccchHHHHHH
Q 021235 265 -------------------YTQGLLDGLNA-----------GVDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 265 -------------------~i~~l~~g~~~-----------~~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
....+++++.. +...++++.|+|.+...++..+..
T Consensus 276 ~~~~g~~~~~~~~~~g~~~~~~tia~gl~~~~~g~~~~~l~~~~~~~~~~V~d~e~~~a~~~l~~ 340 (396)
T 1qop_B 276 GIYFGMKAPMMQTADGQIEESYSISAGLDFPSVGPQHAYLNSIGRADYVSITDDEALEAFKTLCR 340 (396)
T ss_dssp EEETEEEEEECBCTTSCBCCCCCSSGGGCCSSCCHHHHHHHHTTSSEEEEEEHHHHHHHHHHHHH
T ss_pred eeeccchhhhcccccCCcCCCceeeccCCCCCCCHHHHHHHhcCCeEEEEECHHHHHHHHHHHHH
Confidence 01223333332 123588999999998888887764
No 37
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=100.00 E-value=5.9e-33 Score=271.15 Aligned_cols=238 Identities=18% Similarity=0.178 Sum_probs=166.9
Q ss_pred CCCCccccCCCCCCC---CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCC
Q 021235 45 FPTPIHKWNLPNLPH---NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNL 121 (315)
Q Consensus 45 ~~TPL~~~~~~~L~~---g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl 121 (315)
.+|||++ +++|++ +.+||+||||+|| +||||+|.+.+++..|.+.|.+.+|+. +++||||+|+|++|+++|+
T Consensus 80 ~~TPL~~--~~~Ls~~~gg~~i~lK~E~lnp--tGSfK~R~a~~~~~~a~~~g~~~vI~~-~ssGNhG~A~A~aaa~~G~ 154 (422)
T 2o2e_A 80 RPSPLYE--ATRLSQHAGSARIFLKREDLNH--TGSHKINNVLGQALLARRMGKTRVIAE-TGAGQHGVATATACALLGL 154 (422)
T ss_dssp CSCCEEE--CGGGGGGTTTCEEEEECGGGCC--SSTTHHHHHHHHHHHHHHTTCCEEEEE-ESSSHHHHHHHHHHHHHTC
T ss_pred CCCCeEE--ChhhHhhcCCCeEEEEEcCCCC--CCcHHHHHHHHHHHHHHHcCCCeEEEe-cCccHHHHHHHHHHHHcCC
Confidence 5699999 788876 5799999999999 799999999999888888898877753 3459999999999999999
Q ss_pred eEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCC--cccccChHHHHHHHHHHHHHhCCCcEEeCCCC--Cchh-
Q 021235 122 DCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKE--EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGG--SNSI- 196 (315)
Q Consensus 122 ~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~--~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~--~n~~- 196 (315)
+|+||||..... ....|+.+++.+||+|+.++.+ .|++ ....+.+.+.++..+.+++..++ ++|.
T Consensus 155 ~~~I~mp~~~~~-----~q~~kv~~~~~~GA~Vv~v~~~~~~~~d-----a~~~a~~~~~~~~~~~~yi~~s~~g~~p~~ 224 (422)
T 2o2e_A 155 DCVIYMGGIDTA-----RQALNVARMRLLGAEVVAVQTGSKTLKD-----AINEAFRDWVANADNTYYCFGTAAGPHPFP 224 (422)
T ss_dssp EEEEEEEHHHHH-----HSHHHHHHHHHTTCEEEEECSTTSCHHH-----HHHHHHHHHHHHTTTEEECCCCSSSCCCCH
T ss_pred cEEEEeCCCcch-----hhHHHHHHHHHCCCEEEEECCCCCCHHH-----HHHHHHHHHHhcCCCcEEEeCCccCCCCcH
Confidence 999999975321 0135789999999999999752 3432 22333333444433444443332 2332
Q ss_pred -hH-HHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCch-------hhH--H-
Q 021235 197 -GT-WGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPD-------YFY--D- 264 (315)
Q Consensus 197 -~~-~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~-------~~~--~- 264 (315)
.. .|+.+++.||.+|+.+.. +..||+||+|+|+||+++|++.+++. .|.+|||||++.++.. .+. .
T Consensus 225 ~~v~~~q~t~g~Ei~~Ql~~~~-~~~pD~vvvpvG~GG~~~Gi~~~~~~-~p~v~vigVe~~g~~~~~~~~~~~l~~g~~ 302 (422)
T 2o2e_A 225 TMVRDFQRIIGMEARVQIQGQA-GRLPDAVVACVGGGSNAIGIFHAFLD-DPGVRLVGFEAAGDGVETGRHAATFTAGSP 302 (422)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHS-SSCCSEEEEEGGGHHHHHTTSGGGTT-CTTCEEEEEEECC-----------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-CCCCCEEEEccCCchhHHHHHHHHhc-CCCCeEEEEecCCCcccchhHHHHHHcCCc
Confidence 23 367889999999985311 24589999999999999999888864 7899999999998621 111 0
Q ss_pred -------------------HHHHHHhhhcC-----------CCCCCCeEEecCCcccchHHHHHH
Q 021235 265 -------------------YTQGLLDGLNA-----------GVDSRDIVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 265 -------------------~i~~l~~g~~~-----------~~~~~dvv~v~e~~~~~~~~~~~~ 299 (315)
....+.+++.. +...++++.|+|.+.+.++..+..
T Consensus 303 ~~~~g~~~~~~~~~~g~~~~~~tia~gl~~~~~g~~~~~l~~~~~~~~~~Vsd~e~~~a~~~l~~ 367 (422)
T 2o2e_A 303 GAFHGSFSYLLQDEDGQTIESHSISAGLDYPGVGPEHAWLKEAGRVDYRPITDSEAMDAFGLLCR 367 (422)
T ss_dssp --------------------------------------------CCEEEEECHHHHHHHHHHHHH
T ss_pred eeccccchhhcccccccccCCceeecccCCCCCCHHHHHHHHhCCeeEEEECHHHHHHHHHHHHH
Confidence 11223333322 123477899999999888887754
No 38
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=100.00 E-value=1.2e-32 Score=273.38 Aligned_cols=231 Identities=13% Similarity=0.086 Sum_probs=172.1
Q ss_pred ccCCCCCCCccccCCCCCCC---C-CeEEEEeCCCCCCCCchhHHHHHHHHHHHHHH---c--CCCEEEecCCchhHHHH
Q 021235 40 FSLGHFPTPIHKWNLPNLPH---N-TEVWLKRDDLSGMQLSGNKVRKLEFLMADAVA---Q--GADCIITIGGIQSNHCR 110 (315)
Q Consensus 40 ~~~~~~~TPL~~~~~~~L~~---g-~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~---~--G~~~vVt~g~s~GNhg~ 110 (315)
+.+..++|||++ +++|++ | .+||+|+|++|| +||||+|++.+++..+.+ + |.++||+ +|+||||+
T Consensus 124 v~l~~g~TPLv~--l~~L~~~~lg~~~l~~K~E~~nP--TGSFKDRga~~~~~~l~~~~~~~~g~~~Vv~--aSsGNtG~ 197 (486)
T 1e5x_A 124 VSAFEGNSNLFW--AERFGKQFLGMNDLWVKHCGISH--TGSFKDLGMTVLVSQVNRLRKMKRPVVGVGC--ASTGDTSA 197 (486)
T ss_dssp CCCCCCCCCEEE--CHHHHHHHHCCSSEEEEETTSST--TSBTTHHHHHHHHHHHHHHHHTTCCCCEEEE--CCCSHHHH
T ss_pred ccccCCCCCcEE--CcccchhhcCCCcEEEeeccCCC--ccCHHHHHHHHHHHHHHHHHHcCCCCeEEEE--cCCCHHHH
Confidence 567788999999 666543 3 489999999999 699999998888766544 2 5678886 46799999
Q ss_pred HHHHHHHHcCCeEEEEecCC-CcccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCCCcEEeC
Q 021235 111 AAAVAAKYLNLDCYLILRTS-KVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIP 189 (315)
Q Consensus 111 alA~aa~~lGl~~~ivvp~~-~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip 189 (315)
|+|++|+++|++|+||||.. .+ ..|+.+++.+||+|+.++. .|+++ .++++++.++. ..|+++
T Consensus 198 AlA~~a~~~Gi~~~I~~P~~~~s--------~~k~~~~~~~GA~vi~v~g-~~dd~------~~~a~~l~~~~-~~~~vn 261 (486)
T 1e5x_A 198 ALSAYCASAGIPSIVFLPANKIS--------MAQLVQPIANGAFVLSIDT-DFDGC------MKLIREITAEL-PIYLAN 261 (486)
T ss_dssp HHHHHHHHHTCCEEEEEEGGGCC--------HHHHHHHHHTTCEEEEEES-CHHHH------HHHHHHHHHHS-CEEEGG
T ss_pred HHHHHHHHcCCeEEEEECCCCCC--------HHHHHHHHhCCCEEEEECC-CHHHH------HHHHHHHHhcC-CEEEeC
Confidence 99999999999999999985 54 3578999999999999987 47642 23344555443 367775
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCC------CCCeEEEEeccCCchhhH
Q 021235 190 VGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGT------LKAKVHAFSVCDDPDYFY 263 (315)
Q Consensus 190 ~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~------~~~rVigV~~~g~~~~~~ 263 (315)
. .|+...+||.+++.||++|+. +..+|+||+|+|+||+++|++.++++.. +.+||++|++.+......
T Consensus 262 s--~N~~~i~gq~t~~~Ei~~ql~----~~~~D~vvvpvG~GG~i~Gi~~a~k~~~~~Gli~p~~rvi~Ve~~~~~~l~~ 335 (486)
T 1e5x_A 262 S--LNSLRLEGQKTAAIEILQQFD----WQVPDWVIVPGGNLGNIYAFYKGFKXCQELGLVDRIPRMVCAQAANANPLYL 335 (486)
T ss_dssp G--SHHHHHHHHTHHHHHHHHHTT----SCCCSEEEEECSSTHHHHHHHHHHHHHHHTTSSSCCCEEEEEEETTSSTHHH
T ss_pred C--CCHHHHHHHHHHHHHHHHHcC----CCCCCEEEEeCCcHHHHHHHHHHHHHhhhhccCCCCCEEEEEecCCCchHHH
Confidence 4 389999999999999999985 2358999999999999999999998653 788999999997654221
Q ss_pred ------------HHHHHHHhhhcCCC---------CCCC----eEEecCCcccchHHHHHH
Q 021235 264 ------------DYTQGLLDGLNAGV---------DSRD----IVNIQNVSVYMTFKNILM 299 (315)
Q Consensus 264 ------------~~i~~l~~g~~~~~---------~~~d----vv~v~e~~~~~~~~~~~~ 299 (315)
.....++++++... ..++ ++.|+|.++..++. ++.
T Consensus 336 ~~~~G~~~~~~~~~~~t~a~gi~i~~p~~~~~~~~~~~~~~g~~~~Vsd~e~~~ai~-l~~ 395 (486)
T 1e5x_A 336 HYKSGWKDFKPMTASTTFASAIQIGDPVSIDRAVYALKKCNGIVEEATEEELMDAMA-QAD 395 (486)
T ss_dssp HHHTTTTTCCC----------------CCCHHHHHHHHHTTCEEEEECHHHHHHHHH-HHH
T ss_pred HHHcCCCccccCCCCCeeCccccCCCCccHHHHHHHHhccCCeEEEECHHHHHHHHH-HHH
Confidence 11345666665421 2345 88899988888887 543
No 39
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=99.94 E-value=3.4e-27 Score=230.79 Aligned_cols=223 Identities=14% Similarity=0.095 Sum_probs=157.6
Q ss_pred CCCCccccCCCCCCCCCeEEEEeCCCC-CCCCchhHHHHHHHH---HHHHHHcCCCEEEecCCchhHHHHHHH-HHHHHc
Q 021235 45 FPTPIHKWNLPNLPHNTEVWLKRDDLS-GMQLSGNKVRKLEFL---MADAVAQGADCIITIGGIQSNHCRAAA-VAAKYL 119 (315)
Q Consensus 45 ~~TPL~~~~~~~L~~g~~v~vKrEdl~-~~~~gg~K~R~l~~l---l~~a~~~G~~~vVt~g~s~GNhg~alA-~aa~~l 119 (315)
++|||++ +++ +||+ +|+++ | +||||+|++.++ +.++.+.+..+||+ +|+||||+|+| ++|+++
T Consensus 82 ~~TPL~~--l~~-----~i~~-~E~~~~p--TgSfKdr~a~~l~~~l~~a~~~~~~~Iv~--atsGNtG~A~A~~~a~~~ 149 (428)
T 1vb3_A 82 FPAPVAN--VES-----DVGC-LELFHGP--TLAFKDFGGRFMAQMLTHIAGDKPVTILT--ATSGDTGAAVAHAFYGLP 149 (428)
T ss_dssp SCCCEEE--EET-----TEEE-EECCCST--TSBTHHHHHHHHHHHHHHHTTTCCEEEEE--ECSSSHHHHHHHHTTTCT
T ss_pred CCCCeEE--ecC-----CeEE-eeccCCC--cccHHHHHHHHHHHHHHHHHhcCCCEEEe--cCCchHHHHHHHHHhhhc
Confidence 7899999 432 8999 88885 7 799999999887 45553333456775 46799999999 599999
Q ss_pred CCeEEEEecCC-CcccCCCCCccchHHHHHhCCCEE--EEEcCCcccccChHHHHHHHHHH--HHHhCCCcEEeCCCCCc
Q 021235 120 NLDCYLILRTS-KVLVDQDPGLIGNLLVERLVGAHI--ELISKEEYSKIGSVTLTNILKEK--LLKEGRRPYVIPVGGSN 194 (315)
Q Consensus 120 Gl~~~ivvp~~-~~~~~~~p~~~~n~~~~r~~GAeV--~~v~~~~~~~~~~~~~~~~~~~~--l~~~~~~~y~ip~g~~n 194 (315)
|++|+||||+. .+ ..|..+|+.+||+| +.++. .|+++ .+.++++.++ ++++. . + ...+..|
T Consensus 150 G~~~~I~~P~~~~s--------~~k~~~m~~~GA~V~~v~v~g-~~d~~--~~~~~~~~~d~~~~~~~-~-~-~~~n~~n 215 (428)
T 1vb3_A 150 NVKVVILYPRGKIS--------PLQEKLFCTLGGNIETVAIDG-DFDAC--QALVKQAFDDEELKVAL-G-L-NSANSIN 215 (428)
T ss_dssp TEEEEEEEETTCSC--------HHHHHHHHSCCTTEEEEEEES-CHHHH--HHHHHHGGGCHHHHHHH-T-E-ECCSTTS
T ss_pred CCeEEEEECCCCCC--------HHHHHHHHhcCCeEEEEEeCC-CHHHH--HHHHHHHHhchhhhhhc-C-e-eeCCCCC
Confidence 99999999994 64 34788999999999 66665 46542 1122222111 11111 2 2 2334468
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHHH---------
Q 021235 195 SIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDY--------- 265 (315)
Q Consensus 195 ~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~~--------- 265 (315)
+....||.+++.||++|+... +..+|+||+|+|+||+++|++.+++...|..|||+|+..++. +.+.
T Consensus 216 ~~~~~gq~t~~~Ei~~ql~~~--g~~~d~vvvpvG~GG~i~G~~~a~~~g~p~~kii~a~~~~~~--l~~~~~~G~~~~~ 291 (428)
T 1vb3_A 216 ISRLLAQICYYFEAVAQLPQE--TRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDT--VPRFLHDGQWSPK 291 (428)
T ss_dssp HHHHHHTTHHHHHHHTTSCTT--TTTSEEEEEECSSCHHHHHHHHHHHTTCCCSEEEEEECSCCH--HHHHHHHSCCCCC
T ss_pred HHHHHHHHHHHHHHHHHcccc--cCCCCEEEEeCCchHHHHHHHHHHHcCCCCCeEEeecCCChH--HHHHHHcCCcccC
Confidence 888999999999999998631 236999999999999999999999876677799999877642 1111
Q ss_pred --HHHHHhhhcCCC-------------C-----CCCeEEecCCcccchHHHH
Q 021235 266 --TQGLLDGLNAGV-------------D-----SRDIVNIQNVSVYMTFKNI 297 (315)
Q Consensus 266 --i~~l~~g~~~~~-------------~-----~~dvv~v~e~~~~~~~~~~ 297 (315)
+..+.+++.... . .++++.|+|.+...++..+
T Consensus 292 ~~~~tis~g~~i~~p~~~~~~~~l~~~~~~~~~~~~~~~Vsd~e~~~a~~~l 343 (428)
T 1vb3_A 292 ATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMREL 343 (428)
T ss_dssp CCCCCSSGGGCCSSCTTHHHHHHHHHHTTCCGGGSEEEECCHHHHHHHHHHH
T ss_pred CCCCcccchhcCCCCccHHHHHHHHhcchhhhhCcEEEEECHHHHHHHHHHH
Confidence 122334443210 1 3578888888888887776
No 40
>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}
Probab=99.88 E-value=2.3e-22 Score=198.13 Aligned_cols=178 Identities=12% Similarity=0.066 Sum_probs=131.8
Q ss_pred CCccccCCCCCCCCCeEEEEeCCCCCCCCchhHHHHHHHH---HHHHH-HcCCC-EEEecCCchhHHHHHH-HHHHHHcC
Q 021235 47 TPIHKWNLPNLPHNTEVWLKRDDLSGMQLSGNKVRKLEFL---MADAV-AQGAD-CIITIGGIQSNHCRAA-AVAAKYLN 120 (315)
Q Consensus 47 TPL~~~~~~~L~~g~~v~vKrEdl~~~~~gg~K~R~l~~l---l~~a~-~~G~~-~vVt~g~s~GNhg~al-A~aa~~lG 120 (315)
|||.+ + +-++|+|.|++|| +||||+|++.++ +..+. ++|.. +||++ |+||||++. |++|+++|
T Consensus 94 ~pl~~--l-----~~~~~~kee~~~P--TgSFKDRga~~~~~~l~~a~~~~g~~~~Vv~A--SSGNtG~aa~aa~a~~~G 162 (468)
T 4f4f_A 94 CPLVQ--T-----DANEFVLELFHGP--TLAFKDVAMQLLARMMDYVLAQRGERATIVGA--TSGDTGGAAIEAFGGRDN 162 (468)
T ss_dssp SCEEE--E-----ETTEEEEECCCST--TSBTHHHHHHHHHHHHHHHHHHTTCCEEEEEE--CSSHHHHHHHHHHTTCSS
T ss_pred CceEE--e-----cCCeehHHhccCC--cccHHHHHHHHHHHHHHHHHHhcCCCcEEEEE--CCchHHHHHHHHHHhccC
Confidence 77777 2 2379999999999 799999999988 77764 56664 67754 679999554 66799999
Q ss_pred CeEEEEecCC-CcccCCCCCccchHHHHHhCC-CEE--EEEcCCcccccChHHHHHHHHHHHHHh-C----CCcEEeCCC
Q 021235 121 LDCYLILRTS-KVLVDQDPGLIGNLLVERLVG-AHI--ELISKEEYSKIGSVTLTNILKEKLLKE-G----RRPYVIPVG 191 (315)
Q Consensus 121 l~~~ivvp~~-~~~~~~~p~~~~n~~~~r~~G-AeV--~~v~~~~~~~~~~~~~~~~~~~~l~~~-~----~~~y~ip~g 191 (315)
++|+||||+. .+ ..+...++.+| ++| +.++. .||++ .+.++++.++ + ...+.++.
T Consensus 163 i~~~I~~P~~~~s--------~~k~~~~~~~gganV~vv~v~g-~fdda------~~~~k~~~~d~~~~~~~~~~~vns- 226 (468)
T 4f4f_A 163 TDIFILFPNGRVS--------PVQQRQMTSSGFSNVHALSIEG-NFDDC------QNLVKGMFNDLEFCDALSLSGVNS- 226 (468)
T ss_dssp EEEEEEEETTCSC--------HHHHHHHHCSCCTTEEEEEEES-CHHHH------HHHHHHHHHCHHHHHHHTEEECCT-
T ss_pred CcEEEEeCCCCCC--------HHHHHHHHhcCCCeEEEeecCC-CHHHH------HHHHHHHHhccccccccceEeCCC-
Confidence 9999999998 64 24678899997 455 66665 57653 2223333221 0 12344443
Q ss_pred CCchhhHHHHHHHHHHHHHHHhcCCCCCCCCe---EEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCc
Q 021235 192 GSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD---IVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 259 (315)
Q Consensus 192 ~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~---ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~ 259 (315)
.|+..+.|+.+++.||++|+. .+|. ||||+|+||+++|++.+.+.-.|..|||++ +.+..
T Consensus 227 -in~~ri~GQ~T~~~Ei~~ql~------~~d~~v~vvVPvG~GG~i~g~~~Ak~mGlPi~kli~a-~n~~~ 289 (468)
T 4f4f_A 227 -INWARIMPQVVYYFTAALSLG------APDRAVSFTVPTGNFGDIFAGYVAKRMGLPIEQLIIA-TNDND 289 (468)
T ss_dssp -TSHHHHGGGHHHHHHHHHHTT------TTSSCEEEEEECSSSHHHHHHHHHHHHTCCEEEEEEE-ECSCC
T ss_pred -CCHHHHHhHHHHHHHHHHhcc------cCCCCeEEEEEeCCcHHHHHHHHHHHhCCCCCEEEEE-eCCch
Confidence 488889999999999999985 4788 999999999999999885433356699999 65544
No 41
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=99.87 E-value=1.6e-21 Score=194.17 Aligned_cols=193 Identities=12% Similarity=0.028 Sum_probs=132.8
Q ss_pred CCCCCccccCCCCCCCCCeEEEEeCCCCCCCCchhHHHHHHHH---HHHHH-HcC---------CCEEEecCCchhHHHH
Q 021235 44 HFPTPIHKWNLPNLPHNTEVWLKRDDLSGMQLSGNKVRKLEFL---MADAV-AQG---------ADCIITIGGIQSNHCR 110 (315)
Q Consensus 44 ~~~TPL~~~~~~~L~~g~~v~vKrEdl~~~~~gg~K~R~l~~l---l~~a~-~~G---------~~~vVt~g~s~GNhg~ 110 (315)
.+.|||+++.++++ .+||+|.|++|| +||||||.+.++ +.+++ ++| ..+||+ +|+||||.
T Consensus 94 ~g~TPLv~~~l~~l---~~l~~K~e~~nP--TgSFKDrga~~~~~~~~~a~~~~g~~~~~~~~~~~~Iv~--ATSGNtG~ 166 (514)
T 1kl7_A 94 DEVTPLVQNVTGDK---ENLHILELFHGP--TYAFKDVALQFVGNLFEYFLQRTNANLPEGEKKQITVVG--ATSGDTGS 166 (514)
T ss_dssp TTSSCEECCTTCSS---SCEEEEECCCST--TSBTHHHHHHHHHHHHHHHHHHHHTTSCSSSCCCEEEEE--ECSSSHHH
T ss_pred CCCCceeehhcccc---cchhhhhhccCC--CCcHHHHHHHHHHHHHHHHHHhcCCccccccCCCCEEEE--CCCCcHHH
Confidence 56799998211233 489999999999 799999999888 44443 345 346665 47799999
Q ss_pred HHHHHH--HHcCCeEEEEecCC-CcccCCCCCccchHHHHH--hCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCC--
Q 021235 111 AAAVAA--KYLNLDCYLILRTS-KVLVDQDPGLIGNLLVER--LVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGR-- 183 (315)
Q Consensus 111 alA~aa--~~lGl~~~ivvp~~-~~~~~~~p~~~~n~~~~r--~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~-- 183 (315)
| |++| ++.|++|+||||+. .+. ..+.++++ .+|++++.++. .||++ .+.++++.+..+
T Consensus 167 A-A~~a~a~~~Gi~~~I~~P~~~~S~-------~q~~qm~~~~g~~~~vv~v~g-~fdda------~~~vk~l~~~~~~~ 231 (514)
T 1kl7_A 167 A-AIYGLRGKKDVSVFILYPTGRISP-------IQEEQMTTVPDENVQTLSVTG-TFDNC------QDIVKAIFGDKEFN 231 (514)
T ss_dssp H-HHHHHTTCTTEEEEEEEETTSSCH-------HHHHHHHHCCCTTEEEEEESS-CHHHH------HHHHHHHHHCSSCC
T ss_pred H-HHHHHHhhcCCeEEEEEcCCCCCH-------HHHHHHhhhcCCCEEEEEcCC-CHHHH------HHHHHHHHhccccc
Confidence 9 6666 89999999999997 542 12344443 34556777665 47642 333445544321
Q ss_pred CcE-EeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCc
Q 021235 184 RPY-VIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 259 (315)
Q Consensus 184 ~~y-~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~ 259 (315)
..+ +...+..|+....|+.+.+.|+++|+... ....+|+||+|+|+||++.|.+.+.+.-.|..|+|+|++++++
T Consensus 232 ~~~~~~~~Ns~N~~ri~gQ~tyy~e~~~ql~~~-~~~~~d~~vvP~GngG~i~a~~~ak~~G~p~~rli~v~~~n~~ 307 (514)
T 1kl7_A 232 SKHNVGAVNSINWARILAQMTYYFYSFFQATNG-KDSKKVKFVVPSGNFGDILAGYFAKKMGLPIEKLAIATNENDI 307 (514)
T ss_dssp --CCBCCCCSCCHHHHHHHHHHHHHHHHHHHSS-SSCCCEEEEEECSSSHHHHHHHHHHHHTCCCCCEEEEECSCCH
T ss_pred ccceeEeeCCCCHhHHhhHHHHHHHHHHHHhhh-cCCCCcEEEEECCchHHHHHHHHHHHcCCCCCEEEEEeCCcch
Confidence 001 11123347878899999999999998310 0136899999999999999998755544567799999998754
No 42
>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}
Probab=99.85 E-value=1.2e-20 Score=186.27 Aligned_cols=186 Identities=10% Similarity=0.026 Sum_probs=136.2
Q ss_pred CCccccCCCCCCCCCeEEEEeCCCCCCCCchhHHHHHHHH---HHHHH-HcCCCE-EEecCCchhHHHHHHHHHHH-HcC
Q 021235 47 TPIHKWNLPNLPHNTEVWLKRDDLSGMQLSGNKVRKLEFL---MADAV-AQGADC-IITIGGIQSNHCRAAAVAAK-YLN 120 (315)
Q Consensus 47 TPL~~~~~~~L~~g~~v~vKrEdl~~~~~gg~K~R~l~~l---l~~a~-~~G~~~-vVt~g~s~GNhg~alA~aa~-~lG 120 (315)
|||.+ +..- ++.++|+|.|.+|| +||||||++..+ +..+. ++|... ||+. |+||||.|+|++++ +.|
T Consensus 103 ~Pl~~--l~~~-~~~~l~vkee~~~P--TgSFKDRga~~~~~ll~~a~~~~g~~~~Vv~A--SSGNtG~Aaa~a~~~~~G 175 (487)
T 3v7n_A 103 TPLTT--LGTE-NGAPVSLLELSNGP--TLAFKDMAMQLLGNLFEYTLAKHGETLNILGA--TSGDTGSAAEYAMRGKEG 175 (487)
T ss_dssp SCEEE--EEEE-TTEEEEEEECCCST--TSBTHHHHHHHHHHHHHHHHHTTTCCEEEEEE--CSSHHHHHHHHHHTTCTT
T ss_pred ceeEE--ecCC-CCcceeHHhhccCC--cCcHHHHHHHHHHHHHHHHHHhcCCCcEEEEe--CChHHHHHHHHHHHhccC
Confidence 68877 2110 01239999999999 799999999888 77775 466654 6654 67999999888877 899
Q ss_pred CeEEEEecCC-CcccCCCCCccchHHHHHhCCC---EEEEEcCCcccccChHHHHHHHHHHHHHh-----CCCcEEeCCC
Q 021235 121 LDCYLILRTS-KVLVDQDPGLIGNLLVERLVGA---HIELISKEEYSKIGSVTLTNILKEKLLKE-----GRRPYVIPVG 191 (315)
Q Consensus 121 l~~~ivvp~~-~~~~~~~p~~~~n~~~~r~~GA---eV~~v~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~y~ip~g 191 (315)
++|+||||+. .+ ..+..+++.+|| +++.|+. .||++ +++++++.++ ....++++.
T Consensus 176 i~~~I~~P~~~~s--------~~k~~qm~~~Ga~nv~vv~v~G-~fDda------~~~vk~~~~d~~~~~~~~l~~vns- 239 (487)
T 3v7n_A 176 VRVFMLSPHKKMS--------AFQTAQMYSLQDPNIFNLAVNG-VFDDC------QDIVKAVSNDHAFKAQQKIGTVNS- 239 (487)
T ss_dssp EEEEEEEETTCSC--------HHHHHHHHTCCCTTEEEEEEES-CHHHH------HHHHHHHHTCHHHHHHTTEECCST-
T ss_pred CeEEEEECCCCCC--------HHHHHHHHhcCCCcEEEEEECC-CHHHH------HHHHHHhhhchHHHhhcCeeeeCC-
Confidence 9999999997 64 347889999998 6777776 47653 2223333221 112344432
Q ss_pred CCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCC
Q 021235 192 GSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDD 258 (315)
Q Consensus 192 ~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~ 258 (315)
.|+..+.|+.+.+.|+..|+.+ .+..+|.|+||+|+||+++|++.+.+.-.|-.|||+++.+++
T Consensus 240 -~Np~ri~gQ~tyy~~~~~el~~--~~~~~d~vvVP~GngG~i~g~~~A~~mGlp~~rli~a~~~n~ 303 (487)
T 3v7n_A 240 -INWARVVAQVVYYFKGYFAATR--SNDERVSFTVPSGNFGNVCAGHIARMMGLPIEKLVVATNEND 303 (487)
T ss_dssp -TCHHHHHHHHHHHHHHHHHTCS--STTCCEEEEEGGGCHHHHHHHHHHHHTTCCEEEEEEECTTCH
T ss_pred -CCHHHHHhHHHHHHHHHHHHHh--cCCCCcEEEEecCchHHHHHHHHHHHcCCCCceEEEEeCCCc
Confidence 4788889998888888888842 235699999999999999999987654335569999999973
No 43
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=89.93 E-value=9.2 Score=33.27 Aligned_cols=159 Identities=8% Similarity=-0.019 Sum_probs=78.8
Q ss_pred HHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcc-----cCCCCCccch--HH-HHHhCCC--EEE
Q 021235 86 LMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-----VDQDPGLIGN--LL-VERLVGA--HIE 155 (315)
Q Consensus 86 ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~-----~~~~p~~~~n--~~-~~r~~GA--eV~ 155 (315)
.+.....++++.||..+. ..+........++..|++++.+-....+. ...+....+. .. +.+.+|. ++.
T Consensus 53 ~~~~l~~~~vdgiii~~~-~~~~~~~~~~~~~~~~ipvV~~~~~~~~~~~~~~v~~d~~~~g~~a~~~l~~~~g~~~~i~ 131 (303)
T 3d02_A 53 IIEDLIARKVDAITIVPN-DANVLEPVFKKARDAGIVVLTNESPGQPSANWDVEIIDNEKFAAEYVEHMAKRMGGKGGYV 131 (303)
T ss_dssp HHHHHHHTTCSEEEECCS-CHHHHHHHHHHHHHTTCEEEEESCTTCTTCSEEEESSCHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHcCCCEEEEecC-ChHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEecCHHHHHHHHHHHHHHHhCcCceEE
Confidence 355666788999886543 33333344455667899988774320110 0000000111 11 2233676 676
Q ss_pred EEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCC-CCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhH
Q 021235 156 LISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVG-GSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTI 234 (315)
Q Consensus 156 ~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g-~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~ 234 (315)
.+....... ...++.+-..+.+++.++..-++... ..+.....++ ....++.++- .++|+||+. +...+
T Consensus 132 ~i~g~~~~~-~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~------~~~~ai~~~--~d~~a 201 (303)
T 3d02_A 132 IYVGSLTVP-QHNLWADLLVKYQKEHYPDMHEVTRRMPVAESVDDSR-RTTLDLMKTY------PDLKAVVSF--GSNGP 201 (303)
T ss_dssp EECSCSSCH-HHHHHHHHHHHHHHHHCTTEEESSSCBSCTTCHHHHH-HHHHHHHHHC------TTEEEEEES--STTHH
T ss_pred EEecCCCCc-cHHHHHHHHHHHHHhhCCCCEEEEeecCCCCCHHHHH-HHHHHHHHhC------CCCCEEEEe--CCcch
Confidence 665321110 11223333444555444332233221 1111112233 2334444331 358888875 44578
Q ss_pred HHHHHHHhcCCC--CCeEEEEec
Q 021235 235 AGLSLGSWLGTL--KAKVHAFSV 255 (315)
Q Consensus 235 aGl~~~~k~~~~--~~rVigV~~ 255 (315)
.|+..++++.+. ++.|+|++-
T Consensus 202 ~g~~~al~~~g~~~dv~vig~d~ 224 (303)
T 3d02_A 202 IGAGRAVKEKRAKNKVAVYGMMI 224 (303)
T ss_dssp HHHHHHHHHTTCTTTCEEEECCC
T ss_pred hHHHHHHHhcCCCCCeEEEEeCC
Confidence 899999998775 688888753
No 44
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=88.41 E-value=11 Score=32.74 Aligned_cols=201 Identities=8% Similarity=-0.033 Sum_probs=99.1
Q ss_pred HHHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcc-----cCCCCCccch--HHHHHhCC---CE
Q 021235 84 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-----VDQDPGLIGN--LLVERLVG---AH 153 (315)
Q Consensus 84 ~~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~-----~~~~p~~~~n--~~~~r~~G---Ae 153 (315)
..++..+.+++++.||..+. ..+........+...|++++++-...... ...+....+. ...+...| .+
T Consensus 59 ~~~i~~l~~~~vdgiii~~~-~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~g~~~~~ 137 (304)
T 3gbv_A 59 VATSQAVIEEQPDGVMFAPT-VPQYTKGFTDALNELGIPYIYIDSQIKDAPPLAFFGQNSHQSGYFAARMLMLLAVNDRE 137 (304)
T ss_dssp HHHHHHHHTTCCSEEEECCS-SGGGTHHHHHHHHHHTCCEEEESSCCTTSCCSEEEECCHHHHHHHHHHHHHHHSTTCSE
T ss_pred HHHHHHHHhcCCCEEEECCC-ChHHHHHHHHHHHHCCCeEEEEeCCCCCCCceEEEecChHHHHHHHHHHHHHHhCCCCe
Confidence 34466677788999987643 23333444555667799988775432110 0000000111 11222233 47
Q ss_pred EEEEcCC---cccccChHHHHHHHHHHHHHhCCCcE--EeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeC
Q 021235 154 IELISKE---EYSKIGSVTLTNILKEKLLKEGRRPY--VIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVAC 228 (315)
Q Consensus 154 V~~v~~~---~~~~~~~~~~~~~~~~~l~~~~~~~y--~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~v 228 (315)
|.++... ........++.+-..+.+++.+...- .+..+..+.. .++ ....++.++- .++|+||+..
T Consensus 138 i~~i~~~~~g~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~--~~~-~~~~~~l~~~------~~~~ai~~~~ 208 (304)
T 3gbv_A 138 IVIFRKIHEGVIGSNQQESREIGFRQYMQEHHPACNILELNLHADLNI--EDS-RMLDDFFREH------PDVKHGITFN 208 (304)
T ss_dssp EEEEEEEBTTBCCCHHHHHHHHHHHHHHHHHCTTSEEEEEEEESSCSS--CHH-HHHHHHHHHC------TTCCEEEESS
T ss_pred EEEEEecccCCccchhHHHHHHHHHHHHHhhCCCcEEEEeeecCCCHH--HHH-HHHHHHHHhC------CCeEEEEEcC
Confidence 7776511 00000112333444555666554321 1211212221 233 3445555442 4689999877
Q ss_pred CchhhHHHHHHHHhcCCC-CCeEEEEeccCCchhhHHHHHHHHhhhcCCCCCCCeEEecCCcccchHHHHHHHHHhcCCC
Q 021235 229 GSGGTIAGLSLGSWLGTL-KAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVDSRDIVNIQNVSVYMTFKNILMNILMNGKQ 307 (315)
Q Consensus 229 GtGGt~aGl~~~~k~~~~-~~rVigV~~~g~~~~~~~~i~~l~~g~~~~~~~~dvv~v~e~~~~~~~~~~~~~~~~~~~~ 307 (315)
.. +.|+..++++.+. ++.|+|++-... . ...+.+++- .-.|..+-.+......++|.+.+-+|+.
T Consensus 209 d~---a~g~~~al~~~g~~di~vig~d~~~~---~---~~~~~~~~~-----~~tv~~~~~~~g~~av~~l~~~i~~~~~ 274 (304)
T 3gbv_A 209 SK---VYIIGEYLQQRRKSDFSLIGYDLLER---N---VTCLKEGTV-----SFLIAQQPELQGFNSIKTLCDHLIFRKE 274 (304)
T ss_dssp SC---THHHHHHHHHTTCCSCEEEEESCCHH---H---HHHHHHTSE-----EEEEECCHHHHHHHHHHHHHHHHTSCCC
T ss_pred cc---hHHHHHHHHHcCCCCcEEEEeCCCHH---H---HHHHHcCce-----EEEEEeCHHHHHHHHHHHHHHHHhcCCC
Confidence 54 5689999999884 888999875421 0 111112211 0023333335555666777777666665
Q ss_pred C
Q 021235 308 P 308 (315)
Q Consensus 308 ~ 308 (315)
+
T Consensus 275 ~ 275 (304)
T 3gbv_A 275 V 275 (304)
T ss_dssp C
T ss_pred C
Confidence 4
No 45
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=87.87 E-value=5.9 Score=31.11 Aligned_cols=30 Identities=7% Similarity=-0.034 Sum_probs=24.0
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
++|+.+|. |..|..+|...+..|++++++-
T Consensus 8 ~~viIiG~--G~~G~~la~~L~~~g~~v~vid 37 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLLASDIPLVVIE 37 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEECc--CHHHHHHHHHHHHCCCCEEEEE
Confidence 45666675 8999999999999998877774
No 46
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=87.57 E-value=9.7 Score=33.18 Aligned_cols=161 Identities=10% Similarity=0.034 Sum_probs=81.3
Q ss_pred HHHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCccc-C---CCCC-ccchH--------HHHHhC
Q 021235 84 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLV-D---QDPG-LIGNL--------LVERLV 150 (315)
Q Consensus 84 ~~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~-~---~~p~-~~~n~--------~~~r~~ 150 (315)
...+..+.+++++.||.... ..+........++..|++++++-....... . ..+. ...+. .+.+.+
T Consensus 47 ~~~i~~l~~~~vdgiii~~~-~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~~ 125 (306)
T 8abp_A 47 LNAIDSLAASGAKGFVICTP-DPKLGSAIVAKARGYDMKVIAVDDQFVNAKGKPMDTVPLVMLAATKIGERQGQELYKEM 125 (306)
T ss_dssp HHHHHHHHHTTCCEEEEECS-CGGGHHHHHHHHHHTTCEEEEESSCCBCTTSCBCTTSCEEEECHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCC-CchhhHHHHHHHHHCCCcEEEeCCCCCCccccccccccEEecChhHHHHHHHHHHHHHH
Confidence 34466677888999887643 233444444567778999887752211100 0 0000 00112 222233
Q ss_pred CC------EEEEE--cCCcccccChHHHHHHHHHHHHHhCC-C--cEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCC
Q 021235 151 GA------HIELI--SKEEYSKIGSVTLTNILKEKLLKEGR-R--PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGV 219 (315)
Q Consensus 151 GA------eV~~v--~~~~~~~~~~~~~~~~~~~~l~~~~~-~--~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~ 219 (315)
|. ++-++ +..... ...++.+-..+.+++.+. . ......+..+. ..|+ ..+.++.++ ..
T Consensus 126 g~~~~~~~~i~~~~~~~~~~~--~~~~R~~Gf~~~l~~~g~~~~~~~~~~~~~~~~--~~~~-~~~~~~l~~------~~ 194 (306)
T 8abp_A 126 QKRGWDVKESAVMAITANELD--TARRRTTGSMDALKAAGFPEKQIYQVPTKSNDI--PGAF-DAANSMLVQ------HP 194 (306)
T ss_dssp HHHTCCGGGEEEEEEECTTSH--HHHHHHHHHHHHHHHHTCCGGGEEEEECSSSSH--HHHH-HHHHHHHTT------CT
T ss_pred HhcCCCccceEEEEecCCCCh--HHHHHHHHHHHHHHhcCCCCcEEEeeccCCCCh--HHHH-HHHHHHHHh------CC
Confidence 43 33233 221111 112333444555655431 1 12222222222 2333 233344332 24
Q ss_pred CCCeEEEeCCchhhHHHHHHHHhcCCC---CCeEEEEecc
Q 021235 220 KFDDIVVACGSGGTIAGLSLGSWLGTL---KAKVHAFSVC 256 (315)
Q Consensus 220 ~~D~ivv~vGtGGt~aGl~~~~k~~~~---~~rVigV~~~ 256 (315)
++|.+++-+.+...+.|+..++++.+. ++.|+|++-.
T Consensus 195 ~~~a~~i~~~nD~~A~g~~~al~~~g~~v~di~vvG~D~~ 234 (306)
T 8abp_A 195 EVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGINGV 234 (306)
T ss_dssp TCSEEEEECSSHHHHHHHHHHHHHTTCCGGGEEEEEESSG
T ss_pred CCceEEEEeCCcHHHHHHHHHHHHcCCCCCceEEEEeCcH
Confidence 688866667788899999999999875 6788888754
No 47
>3r2j_A Alpha/beta-hydrolase-like protein; nicotinamidase, cytoplasmic; 2.68A {Leishmania infantum}
Probab=84.96 E-value=6.9 Score=34.07 Aligned_cols=93 Identities=16% Similarity=0.065 Sum_probs=56.5
Q ss_pred CCeEEEEeCCCCCCCCchh-----HHHHHHHHHHHHHHcCCCEEEecCCchhHHHH-HHHHHHHHcCCeEEEEecCCCcc
Q 021235 60 NTEVWLKRDDLSGMQLSGN-----KVRKLEFLMADAVAQGADCIITIGGIQSNHCR-AAAVAAKYLNLDCYLILRTSKVL 133 (315)
Q Consensus 60 g~~v~vKrEdl~~~~~gg~-----K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg~-alA~aa~~lGl~~~ivvp~~~~~ 133 (315)
+-.++-|..+..--..++| .--.+..+| +++|+++|+.+|- ..+.|. ++|.-|..+|++++++.+.....
T Consensus 120 ~d~vi~K~~~~~~~~~SaF~~~~~~~t~L~~~L---~~~gi~~lvv~G~-~T~~CV~~Ta~dA~~~Gy~V~Vv~Da~as~ 195 (227)
T 3r2j_A 120 INAVIRKGVTQQADSYSAFVEDNGVSTGLAGLL---HSIGARRVFVCGV-AYDFCVFFTAMDARKNGFSVVLLEDLTAAV 195 (227)
T ss_dssp CCEEEEESCSTTCCCSSSSBCTTSCBCSHHHHH---HHHTCCEEEEEES-CTTTHHHHHHHHHHHTTCEEEEEEEEECCS
T ss_pred CCEEEECCCcccccccchhccCCCCCCcHHHHH---HHcCCCEEEEEEe-ccchHHHHHHHHHHHCCCEEEEEhHhhCCC
Confidence 4578889843211012333 222343333 3468999998864 456554 78889999999999987755432
Q ss_pred cCCCCCccchHHHHHhCCCEEEEEc
Q 021235 134 VDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 134 ~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
..+ .....+..|+..|++|+...
T Consensus 196 ~~~--~h~~aL~~m~~~g~~v~~s~ 218 (227)
T 3r2j_A 196 DDA--AWSARTAELKDAGVVLLKSS 218 (227)
T ss_dssp CGG--GHHHHHHHHHTTTCEEECGG
T ss_pred CHH--HHHHHHHHHHHcCCEEEEHH
Confidence 111 12234778888899886543
No 48
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=84.79 E-value=7.2 Score=34.37 Aligned_cols=160 Identities=13% Similarity=0.046 Sum_probs=79.4
Q ss_pred HHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCC----C--ccch--H-HHHHhCCCE-E
Q 021235 85 FLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDP----G--LIGN--L-LVERLVGAH-I 154 (315)
Q Consensus 85 ~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p----~--~~~n--~-~~~r~~GAe-V 154 (315)
..+..+.+++++.||..+. ..+........++..|++++++-..... ...++ + ..+. . .+.+..|.. |
T Consensus 49 ~~i~~l~~~~vdgiIi~~~-~~~~~~~~~~~~~~~~iPvV~~~~~~~~-~~~~~~V~~D~~~~g~~a~~~L~~~~G~~~i 126 (313)
T 3m9w_A 49 SQIENMINRGVDVLVIIPY-NGQVLSNVVKEAKQEGIKVLAYDRMIND-ADIDFYISFDNEKVGELQAKALVDIVPQGNY 126 (313)
T ss_dssp HHHHHHHHTTCSEEEEECS-STTSCHHHHHHHHTTTCEEEEESSCCTT-SCCSEEEEECHHHHHHHHHHHHHHHCSSEEE
T ss_pred HHHHHHHHcCCCEEEEeCC-ChhhhHHHHHHHHHCCCeEEEECCcCCC-CCceEEEecCHHHHHHHHHHHHHHhCCCCcE
Confidence 3466677789999887643 2233234555667789998777533211 00000 0 0111 1 122245654 5
Q ss_pred EEEcCCcccccChHHHHHHHHHHHHHhC--CCcEEeCCC-CCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCch
Q 021235 155 ELISKEEYSKIGSVTLTNILKEKLLKEG--RRPYVIPVG-GSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSG 231 (315)
Q Consensus 155 ~~v~~~~~~~~~~~~~~~~~~~~l~~~~--~~~y~ip~g-~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtG 231 (315)
.++.... ......++.+-..+.+++.+ +..-++... ..+.....++ ....+++++-+ .++|+||+. +.
T Consensus 127 ~~i~g~~-~~~~~~~R~~Gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~-----~~~~ai~~~--~d 197 (313)
T 3m9w_A 127 FLMGGSP-VDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENAL-KIMENALTANN-----NKIDAVVAS--ND 197 (313)
T ss_dssp EEEESCT-TCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEECGGGCHHHHH-HHHHHHHHHTT-----TCCCEEEES--SH
T ss_pred EEEECCC-CCccHHHHHHHHHHHHHhhccCCCEEEEeeccCCCcCHHHHH-HHHHHHHHhCC-----CCeeEEEEC--CC
Confidence 5554321 11011123333334444431 122222211 1111222333 34455555431 368999986 56
Q ss_pred hhHHHHHHHHhcCCC--CCeEEEEec
Q 021235 232 GTIAGLSLGSWLGTL--KAKVHAFSV 255 (315)
Q Consensus 232 Gt~aGl~~~~k~~~~--~~rVigV~~ 255 (315)
..+.|+..++++.+. ++.|+|++-
T Consensus 198 ~~a~g~~~al~~~G~~~di~vig~d~ 223 (313)
T 3m9w_A 198 ATAGGAIQALSAQGLSGKVAISGQDA 223 (313)
T ss_dssp HHHHHHHHHHHTTTCTTTSEECCCSC
T ss_pred chHHHHHHHHHHcCCCCCcEEEecCC
Confidence 778899999998775 577877764
No 49
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=84.70 E-value=7.5 Score=35.46 Aligned_cols=63 Identities=16% Similarity=0.178 Sum_probs=43.4
Q ss_pred HHHHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEE
Q 021235 83 LEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 157 (315)
Q Consensus 83 l~~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v 157 (315)
+..++..+...|-+.|+..|| +|.-|++++..|+.+|.+.+++.+.. .+.+.++.+||+.++.
T Consensus 153 a~~~~~~~~~~g~~~vli~gg-~g~vG~~a~qla~~~Ga~Vi~~~~~~-----------~~~~~~~~~Ga~~~~~ 215 (349)
T 3pi7_A 153 AIAMFDIVKQEGEKAFVMTAG-ASQLCKLIIGLAKEEGFRPIVTVRRD-----------EQIALLKDIGAAHVLN 215 (349)
T ss_dssp HHHHHHHHHHHCCSEEEESST-TSHHHHHHHHHHHHHTCEEEEEESCG-----------GGHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhhCCCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHcCCCEEEE
Confidence 344555555556566665544 37899999999999999766665332 2577888999986553
No 50
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=83.47 E-value=23 Score=31.26 Aligned_cols=160 Identities=13% Similarity=0.108 Sum_probs=77.8
Q ss_pred HHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCc-c----c-CCCCCccchH---HHHHh--CCC-
Q 021235 85 FLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKV-L----V-DQDPGLIGNL---LVERL--VGA- 152 (315)
Q Consensus 85 ~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~-~----~-~~~p~~~~n~---~~~r~--~GA- 152 (315)
..+..++.++++.||... ..++........++..|++++.+-..... . . ..+....+.. .+.+. .|.
T Consensus 51 ~~i~~li~~~vdgiii~~-~~~~~~~~~~~~a~~~gipvV~~d~~~~~~~~~~~v~~~D~~~~g~~~~~~L~~~~~~g~~ 129 (316)
T 1tjy_A 51 QLVNNFVNQGYDAIIVSA-VSPDGLCPALKRAMQRGVKILTWDSDTKPECRSYYINQGTPKQLGSMLVEMAAHQVDKEKA 129 (316)
T ss_dssp HHHHHHHHTTCSEEEECC-SSSSTTHHHHHHHHHTTCEEEEESSCCCGGGCSEEEESCCHHHHHHHHHHHHHHHHCSSSE
T ss_pred HHHHHHHHcCCCEEEEeC-CCHHHHHHHHHHHHHCcCEEEEecCCCCCCCceEEEecCCHHHHHHHHHHHHHHHcCCCCC
Confidence 346666778999988653 33333234445567789998887432111 0 0 0010001111 12232 233
Q ss_pred EEEEEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchh
Q 021235 153 HIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGG 232 (315)
Q Consensus 153 eV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGG 232 (315)
++.++.... .......+.+-..+.+++.++..-++.....+.....++ ....+++++- .++|.||++ +..
T Consensus 130 ~i~~i~g~~-~~~~~~~r~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ll~~~------~~~~aI~~~--nD~ 199 (316)
T 1tjy_A 130 KVAFFYSSP-TVTDQNQWVKEAKAKISQEHPGWEIVTTQFGYNDATKSL-QTAEGIIKAY------PDLDAIIAP--DAN 199 (316)
T ss_dssp EEEEEESCS-SCHHHHHHHHHHHHHHHHHCTTEEEEEEEECTTCHHHHH-HHHHHHHHHC------SSCCEEEEC--STT
T ss_pred EEEEEEcCC-CChhHHHHHHHHHHHHHhhCCCcEEEEeccCCCCHHHHH-HHHHHHHHhC------CCCCEEEEC--CCc
Confidence 566654321 110112233334445544433322222111111222233 2344444432 368999986 456
Q ss_pred hHHHHHHHHhcCC-CCCeEEEEec
Q 021235 233 TIAGLSLGSWLGT-LKAKVHAFSV 255 (315)
Q Consensus 233 t~aGl~~~~k~~~-~~~rVigV~~ 255 (315)
++.|+..++++.+ .++.|+|++.
T Consensus 200 ~A~g~~~al~~~G~~dv~VvG~D~ 223 (316)
T 1tjy_A 200 ALPAAAQAAENLKRNNLAIVGFST 223 (316)
T ss_dssp HHHHHHHHHHHTTCCSCEEEEBCC
T ss_pred cHHHHHHHHHHcCCCCEEEEEeCC
Confidence 7899999999887 4578888754
No 51
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=82.72 E-value=15 Score=32.75 Aligned_cols=152 Identities=14% Similarity=0.065 Sum_probs=80.2
Q ss_pred HHHHH-HcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCC-------CCC--ccc--hHHHHHhCCCE-
Q 021235 87 MADAV-AQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQ-------DPG--LIG--NLLVERLVGAH- 153 (315)
Q Consensus 87 l~~a~-~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~-------~p~--~~~--n~~~~r~~GAe- 153 (315)
+.+.. +.+++.|| |...+....+++-.+...+++++.+.......... .+. ..+ -...+...|.+
T Consensus 64 ~~~l~~~~~v~~ii--g~~~s~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 141 (358)
T 3hut_A 64 ARAFVDDPRVVGVL--GDFSSTVSMAAGSIYGKEGMPQLSPTAAHPDYIKISPWQFRAITTPAFEGPNNAAWMIGDGFTS 141 (358)
T ss_dssp HHHHHHCTTEEEEE--ECSSHHHHHHHHHHHHHHTCCEEESSCCCGGGTTSCTTEEESSCCGGGHHHHHHHHHHHTTCCE
T ss_pred HHHHhccCCcEEEE--cCCCcHHHHHHHHHHHHCCCcEEecCCCCcccccCCCeEEEecCChHHHHHHHHHHHHHcCCCE
Confidence 34444 56677777 33445677788888999999987753221110000 011 011 12333445754
Q ss_pred EEEEc-CCcccccChHHHHHHHHHHHHHhCCCc---EEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCC
Q 021235 154 IELIS-KEEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACG 229 (315)
Q Consensus 154 V~~v~-~~~~~~~~~~~~~~~~~~~l~~~~~~~---y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vG 229 (315)
|.++. +..|. ....+...+.+++.+... ..++.+..+ +.....+|.+ .++|.||++ +
T Consensus 142 ia~i~~~~~~~----~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~------~~~~~~~l~~--------~~~d~i~~~-~ 202 (358)
T 3hut_A 142 VAVIGVTTDWG----LSSAQAFRKAFELRGGAVVVNEEVPPGNRR------FDDVIDEIED--------EAPQAIYLA-M 202 (358)
T ss_dssp EEEEEESSHHH----HHHHHHHHHHHHHTTCEEEEEEEECTTCCC------CHHHHHHHHH--------HCCSEEEEE-S
T ss_pred EEEEecCcHHH----HHHHHHHHHHHHHcCCEEEEEEecCCCCcc------HHHHHHHHHh--------cCCCEEEEc-c
Confidence 54443 22221 123344455566554321 122332221 1122333332 248888876 5
Q ss_pred chhhHHHHHHHHhcCCCCCeEEEEeccCCc
Q 021235 230 SGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 259 (315)
Q Consensus 230 tGGt~aGl~~~~k~~~~~~rVigV~~~g~~ 259 (315)
.+..+.++...+++.+.++++++.+.....
T Consensus 203 ~~~~a~~~~~~~~~~g~~~p~~~~~~~~~~ 232 (358)
T 3hut_A 203 AYEDAAPFLRALRARGSALPVYGSSALYSP 232 (358)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEECGGGCSH
T ss_pred CchHHHHHHHHHHHcCCCCcEEecCcccCH
Confidence 666889999999999988899887655443
No 52
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=81.01 E-value=2.2 Score=35.91 Aligned_cols=88 Identities=18% Similarity=0.189 Sum_probs=54.7
Q ss_pred CCeEEEEeCCCCCCCCchhH-----HHHHHHHHHHHHHcCCCEEEecCCchhHHH-HHHHHHHHHcCCeEEEEecCCCcc
Q 021235 60 NTEVWLKRDDLSGMQLSGNK-----VRKLEFLMADAVAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVL 133 (315)
Q Consensus 60 g~~v~vKrEdl~~~~~gg~K-----~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg-~alA~aa~~lGl~~~ivvp~~~~~ 133 (315)
+-.++-|.-+-.. .++|. --.+..+| +++|+++|+.+|- ..|.| .++|.-|..+|++++++-+.....
T Consensus 90 ~d~vi~K~~~~~~--ysaF~~~~~~~t~L~~~L---~~~gi~~lvv~G~-~t~~CV~~Ta~da~~~G~~v~v~~Da~~~~ 163 (186)
T 3gbc_A 90 IEAVFYKGAYTGA--YSGFEGVDENGTPLLNWL---RQRGVDEVDVVGI-ATDHCVRQTAEDAVRNGLATRVLVDLTAGV 163 (186)
T ss_dssp CCEEEEECSSSCC--CCGGGCBCSSSCBHHHHH---HHTTCCEEEEEEE-CTTTHHHHHHHHHHHTTCEEEEEEEEEECS
T ss_pred CcEEEECCCCCcc--ccccccCCCCCCcHHHHH---HhcCCCEEEEEEe-cccHHHHHHHHHHHHCCCeEEEEhhhcCCC
Confidence 4467788754111 24443 22343333 4579999998764 45555 578889999999999988765432
Q ss_pred cCCCCCccchHHHHHhCCCEEE
Q 021235 134 VDQDPGLIGNLLVERLVGAHIE 155 (315)
Q Consensus 134 ~~~~p~~~~n~~~~r~~GAeV~ 155 (315)
.++ .....+..|+..|++++
T Consensus 164 ~~~--~~~~al~~m~~~G~~i~ 183 (186)
T 3gbc_A 164 SAD--TTVAALEEMRTASVELV 183 (186)
T ss_dssp CHH--HHHHHHHHHHHTTCEEE
T ss_pred CHH--HHHHHHHHHHHcCCEEe
Confidence 110 11234778888898875
No 53
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=80.52 E-value=28 Score=30.15 Aligned_cols=35 Identities=9% Similarity=0.042 Sum_probs=28.6
Q ss_pred CCCeEEEeCCchhhHHHHHHHHhcCCC-CCeEEEEecc
Q 021235 220 KFDDIVVACGSGGTIAGLSLGSWLGTL-KAKVHAFSVC 256 (315)
Q Consensus 220 ~~D~ivv~vGtGGt~aGl~~~~k~~~~-~~rVigV~~~ 256 (315)
++|+||+ .+..++.|+..++++.+. ++.|+|++-.
T Consensus 203 ~~~ai~~--~~d~~a~g~~~al~~~g~~di~vig~d~~ 238 (309)
T 2fvy_A 203 KIEVVIA--NNDAMAMGAVEALKAHNKSSIPVFGVDAL 238 (309)
T ss_dssp GCCEEEE--SSHHHHHHHHHHHHHTTCTTSCEECSBCC
T ss_pred CccEEEE--CCchhHHHHHHHHHHcCCCCceEEecCCC
Confidence 5899997 466788999999999887 8888887643
No 54
>3v8e_A Nicotinamidase; hydrolase; HET: JJJ; 2.71A {Saccharomyces cerevisiae} PDB: 2h0r_A
Probab=80.41 E-value=3.3 Score=35.73 Aligned_cols=64 Identities=14% Similarity=0.142 Sum_probs=43.3
Q ss_pred HHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCC-CccchHHHHHhCCCEEE
Q 021235 91 VAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDP-GLIGNLLVERLVGAHIE 155 (315)
Q Consensus 91 ~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p-~~~~n~~~~r~~GAeV~ 155 (315)
+++|+++|+.+|-....=-.++|.-|..+|++++++.+.......+ + .....+..|+..|++++
T Consensus 150 ~~~gi~~l~i~G~~t~~CV~~Ta~~a~~~g~~v~v~~Da~~~~~~~-~~~~~~al~~m~~~Gv~i~ 214 (216)
T 3v8e_A 150 EKHHTDEVYIVGVALEYXVKATAISAAELGYKTTVLLDYTRPISDD-PEVINKVKEELKAHNINVV 214 (216)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSCC-HHHHHHHHHHHHHTTCEEE
T ss_pred HhCCCCEEEEEEeccccHHHHHHHHHHHCCCEEEEeccccCCCCcc-cHHHHHHHHHHHHcCCEEe
Confidence 4579999998865444444578888999999999987755432111 0 11235778888898775
No 55
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=78.59 E-value=31 Score=29.57 Aligned_cols=35 Identities=9% Similarity=-0.078 Sum_probs=27.9
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCC----CCCeEEEEec
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGT----LKAKVHAFSV 255 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~----~~~rVigV~~ 255 (315)
.++|+||+. +...+.|+..++++.+ .++.|+|++-
T Consensus 191 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d~ 229 (292)
T 3k4h_A 191 QPPTAIMAT--DDLIGLGVLSALSKKGFVVPKDVSIVSFNN 229 (292)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEESC
T ss_pred CCCcEEEEc--ChHHHHHHHHHHHHhCCCCCCeEEEEEecC
Confidence 468999965 6678889999999876 3677999874
No 56
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=78.34 E-value=32 Score=29.63 Aligned_cols=37 Identities=19% Similarity=0.140 Sum_probs=29.2
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCC----CCCeEEEEeccC
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGT----LKAKVHAFSVCD 257 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~----~~~rVigV~~~g 257 (315)
.++|+|||. +..++.|+..++++.+ .++.|+|++-..
T Consensus 187 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~d~~~ 227 (288)
T 3gv0_A 187 DRPDGIVSI--SGSSTIALVAGFEAAGVKIGEDVDIVSKQSAE 227 (288)
T ss_dssp SCCSEEEES--CHHHHHHHHHHHHTTTCCTTTSCEEEEEESST
T ss_pred CCCcEEEEc--CcHHHHHHHHHHHHcCCCCCCceEEEEecChH
Confidence 468999964 5678889999999876 368899998543
No 57
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=77.88 E-value=13 Score=31.87 Aligned_cols=81 Identities=16% Similarity=0.058 Sum_probs=55.5
Q ss_pred chhHHHHHHHHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCC-cccCCCCCccchHHHHHhCCCEE
Q 021235 76 SGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK-VLVDQDPGLIGNLLVERLVGAHI 154 (315)
Q Consensus 76 gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~-~~~~~~p~~~~n~~~~r~~GAeV 154 (315)
.-|-...+...+++|.+.|++.||.+ |++|-.+..++-.. -|++.++|....- ....++.-.....+.++..|.+|
T Consensus 25 ~eNT~~tl~la~era~e~~Ik~iVVA-S~sG~TA~k~~e~~--~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V 101 (201)
T 1vp8_A 25 RENTEETLRLAVERAKELGIKHLVVA-SSYGDTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEELRKRGAKI 101 (201)
T ss_dssp GGGHHHHHHHHHHHHHHHTCCEEEEE-CSSSHHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHHHTTCEE
T ss_pred cccHHHHHHHHHHHHHHcCCCEEEEE-eCCChHHHHHHHHh--cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEE
Confidence 34778888888999999999999876 46677776655533 6888888873211 00000011145788999999999
Q ss_pred EEEcC
Q 021235 155 ELISK 159 (315)
Q Consensus 155 ~~v~~ 159 (315)
+.-..
T Consensus 102 ~t~tH 106 (201)
T 1vp8_A 102 VRQSH 106 (201)
T ss_dssp EECCC
T ss_pred EEEec
Confidence 88665
No 58
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=76.80 E-value=3.6 Score=34.14 Aligned_cols=90 Identities=19% Similarity=0.204 Sum_probs=53.5
Q ss_pred CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEecCCchhHHH-HHHHHHHHHcCCeEEEEecCCCcccCCCC
Q 021235 60 NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDP 138 (315)
Q Consensus 60 g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg-~alA~aa~~lGl~~~ivvp~~~~~~~~~p 138 (315)
+-.++-|.-+......++|..-.+..+| ++.|.++||.+|- ..|.| .++|.-|..+|++++++.+......++
T Consensus 88 ~~~vi~K~~~~~~~~~saF~~t~L~~~L---~~~gi~~lvi~G~-~t~~CV~~Ta~da~~~Gy~v~vv~Da~~~~~~~-- 161 (180)
T 1im5_A 88 DAVIISKATEPDKEAYSGFEGTDLAKIL---RGNGVKRVYICGV-ATEYCVRATALDALKHGFEVYLLRDAVKGIKPE-- 161 (180)
T ss_dssp TCEEEEECCSTTCCCCSTTTTSSHHHHH---HHTTCCEEEEEEE-CTTTHHHHHHHHHHHTTCEEEEEEEEEECSCHH--
T ss_pred CcEEEECCCCCCCccccCccCCCHHHHH---HhCCCCEEEEEEe-ecCHHHHHHHHHHHHCCCEEEEehhhccCCCHH--
Confidence 3457778753211112344322333333 4579999998764 45555 578888889999999988765432110
Q ss_pred CccchHHHHHhCCCEEE
Q 021235 139 GLIGNLLVERLVGAHIE 155 (315)
Q Consensus 139 ~~~~n~~~~r~~GAeV~ 155 (315)
.+...+..++..|++|+
T Consensus 162 ~h~~al~~m~~~g~~v~ 178 (180)
T 1im5_A 162 DEERALEEMKSRGIKIV 178 (180)
T ss_dssp HHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHcCCEEE
Confidence 01234667777788775
No 59
>2wt9_A Nicotinamidase; hydrolase, pyrazinamidase; HET: GOL; 1.65A {Acinetobacter baumannii} PDB: 2wta_A*
Probab=76.60 E-value=4.9 Score=35.02 Aligned_cols=63 Identities=17% Similarity=0.152 Sum_probs=43.6
Q ss_pred HHcCCCEEEecCCchhHHH-HHHHHHHHHcCCeEEEEecCCCcccCCCCC-ccchHHHHHhCCCEEEE
Q 021235 91 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPG-LIGNLLVERLVGAHIEL 156 (315)
Q Consensus 91 ~~~G~~~vVt~g~s~GNhg-~alA~aa~~lGl~~~ivvp~~~~~~~~~p~-~~~n~~~~r~~GAeV~~ 156 (315)
+++|+++||.+|-. .|.| .++|.-|..+|++++++-+....... +. ....+..++..|++|+.
T Consensus 163 ~~~gi~~lvv~G~~-T~~CV~~Ta~dA~~~Gy~V~Vv~Da~as~~~--~~~~~~aL~~m~~~g~~v~t 227 (235)
T 2wt9_A 163 KERGIDTVYVVGIA-TDFCVAWTALDAVKQGFKTLVIEDACKGIDL--NGSLEQAWQTMQQQGVVRIQ 227 (235)
T ss_dssp HHTTCCEEEEEEEC-TTTHHHHHHHHHHHTTCEEEEEEEEEECCCS--TTHHHHHHHHHHHTTCEEEC
T ss_pred HHCCCCEEEEEEeC-ccHHHHHHHHHHHhCCCEEEEechhccCCCh--hHHHHHHHHHHHHcCCEEEE
Confidence 45799999988644 5555 57888999999999998776543210 11 12347777888988763
No 60
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=76.19 E-value=6 Score=36.11 Aligned_cols=48 Identities=10% Similarity=-0.020 Sum_probs=35.5
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..| + |.-|++++..|+.+|.+.+++.... .+...++.+||+.+.
T Consensus 178 ~~VlV~G-a-G~vG~~a~qla~~~Ga~Vi~~~~~~-----------~~~~~~~~lGa~~v~ 225 (348)
T 3two_A 178 TKVGVAG-F-GGLGSMAVKYAVAMGAEVSVFARNE-----------HKKQDALSMGVKHFY 225 (348)
T ss_dssp CEEEEES-C-SHHHHHHHHHHHHTTCEEEEECSSS-----------TTHHHHHHTTCSEEE
T ss_pred CEEEEEC-C-cHHHHHHHHHHHHCCCeEEEEeCCH-----------HHHHHHHhcCCCeec
Confidence 5565565 3 7899999999999999755553322 257788999998766
No 61
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=75.98 E-value=36 Score=28.98 Aligned_cols=188 Identities=10% Similarity=-0.005 Sum_probs=90.3
Q ss_pred HHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCC---C--ccch--HHHHHhCCC-EEEEEc
Q 021235 87 MADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDP---G--LIGN--LLVERLVGA-HIELIS 158 (315)
Q Consensus 87 l~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p---~--~~~n--~~~~r~~GA-eV~~v~ 158 (315)
+....+++++.|| .+... + ...+ .. .|++++++-........... + ..+. ...+...|. +|.++.
T Consensus 53 ~~~l~~~~vdgiI-~~~~~-~-~~~~---~~-~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~i~~i~ 125 (280)
T 3gyb_A 53 ITSALSMRPDGII-IAQDI-P-DFTV---PD-SLPPFVIAGTRITQASTHDSVANDDFRGAEIATKHLIDLGHTHIAHLR 125 (280)
T ss_dssp HHHHHTTCCSEEE-EESCC--------------CCCEEEESCCCSSSCSTTEEEECHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHhCCCCEEE-ecCCC-C-hhhH---hh-cCCCEEEECCCCCCCCCCCEEEechHHHHHHHHHHHHHCCCCeEEEEe
Confidence 4445678899999 64332 2 1222 22 89998877543301100000 0 0111 122333464 466665
Q ss_pred CCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHH
Q 021235 159 KEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLS 238 (315)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~ 238 (315)
..... ..++.+...+.+++.+...... ....+.....|+ ....+++++- .++|+||+. +..++.|+.
T Consensus 126 ~~~~~---~~~R~~gf~~~l~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~l~~~------~~~~ai~~~--~d~~a~g~~ 192 (280)
T 3gyb_A 126 VGSGA---GLRRFESFEATMRAHGLEPLSN-DYLGPAVEHAGY-TETLALLKEH------PEVTAIFSS--NDITAIGAL 192 (280)
T ss_dssp CSSHH---HHHHHHHHHHHHHHTTCCCEEC-CCCSCCCHHHHH-HHHHHHHHHC------TTCCEEEES--SHHHHHHHH
T ss_pred CCCch---HHHHHHHHHHHHHHcCcCCCcc-cccCCCCHHHHH-HHHHHHHhCC------CCCCEEEEC--ChHHHHHHH
Confidence 43211 2233344455566554322211 111122222344 3444554432 468999975 567888999
Q ss_pred HHHhcCC----CCCeEEEEeccCCchhhHHHHHHHHhhhcCCCCCCCeEEecCCcccchHHHHHHHHHhcCCCC
Q 021235 239 LGSWLGT----LKAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVDSRDIVNIQNVSVYMTFKNILMNILMNGKQP 308 (315)
Q Consensus 239 ~~~k~~~----~~~rVigV~~~g~~~~~~~~i~~l~~g~~~~~~~~dvv~v~e~~~~~~~~~~~~~~~~~~~~~ 308 (315)
.++++.+ .++.|+|++-.. ...+. ...+ -.|..+-.++.....++|.+.+-+|+.+
T Consensus 193 ~al~~~g~~vP~di~vvg~d~~~--------~~~~~---~p~l---ttv~~~~~~~g~~av~~l~~~i~~g~~~ 252 (280)
T 3gyb_A 193 GAARELGLRVPEDLSIIGYDNTP--------LAQTR---LINL---TTIDDNSIGVGYNAALLLLSMLDPEAPH 252 (280)
T ss_dssp HHHHHHTCCTTTTCEEEEESCCH--------HHHST---TTCC---CEEECCHHHHHHHHHHHHHHHHCTTSCC
T ss_pred HHHHHcCCCCCCeeEEEEECCch--------Hhhcc---CCCc---eEEecCHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999876 368899987432 11111 1111 1334443456666777777776535554
No 62
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=75.22 E-value=24 Score=30.71 Aligned_cols=31 Identities=23% Similarity=0.093 Sum_probs=23.2
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
..||| |+ +|--|.++|..-.+.|.+++++-+
T Consensus 17 ~~lVT-Ga-s~gIG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 17 VAFIT-GA-ARGQGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp EEEEE-ST-TSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEE-CC-CcHHHHHHHHHHHHCCCEEEEEec
Confidence 34554 54 367899999999999999887754
No 63
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=74.19 E-value=39 Score=28.51 Aligned_cols=160 Identities=10% Similarity=0.058 Sum_probs=79.0
Q ss_pred HHHHHHHHcC-CCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcc-----cCCCCCccch--H-HHHHhC---CC
Q 021235 85 FLMADAVAQG-ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-----VDQDPGLIGN--L-LVERLV---GA 152 (315)
Q Consensus 85 ~ll~~a~~~G-~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~-----~~~~p~~~~n--~-~~~r~~---GA 152 (315)
..+....+++ ++.||..+. ...........++..|++++++-...... ...+....+. . .+.+.+ |.
T Consensus 49 ~~i~~l~~~~~vdgii~~~~-~~~~~~~~~~~~~~~~ipvV~~~~~~~~~~~~~~V~~d~~~~g~~~~~~l~~~~~~~G~ 127 (276)
T 3ksm_A 49 QILSYHLSQAPPDALILAPN-SAEDLTPSVAQYRARNIPVLVVDSDLAGDAHQGLVATDNYAAGQLAARALLATLDLSKE 127 (276)
T ss_dssp HHHHHHHHHSCCSEEEECCS-STTTTHHHHHHHHHTTCCEEEESSCCSSSCSSEEEECCHHHHHHHHHHHHHHHSCTTSC
T ss_pred HHHHHHHHhCCCCEEEEeCC-CHHHHHHHHHHHHHCCCcEEEEecCCCCCCcceEEccCHHHHHHHHHHHHHHhcCcCCC
Confidence 3466667788 999987642 22233444556777899988874332110 0000000111 1 223333 44
Q ss_pred -EEEEEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCch
Q 021235 153 -HIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSG 231 (315)
Q Consensus 153 -eV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtG 231 (315)
+|.++.... .......+.+...+.+++. +..-+......+.....++ ....++.++- .++|+||+. +.
T Consensus 128 ~~i~~i~~~~-~~~~~~~R~~gf~~~l~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~------~~~~ai~~~--~d 196 (276)
T 3ksm_A 128 RNIALLRLRA-GNASTDQREQGFLDVLRKH-DKIRIIAAPYAGDDRGAAR-SEMLRLLKET------PTIDGLFTP--NE 196 (276)
T ss_dssp EEEEECBCCT-TCHHHHHHHHHHHHHHTTC-TTEEEEECCBCCSSHHHHH-HHHHHHHHHC------SCCCEEECC--SH
T ss_pred ceEEEEEcCC-CchhHHHHHHHHHHHHHhC-CCcEEEEEecCCCcHHHHH-HHHHHHHHhC------CCceEEEEC--Cc
Confidence 455554321 1101112333334444332 1221111111122222333 2344554432 468998865 66
Q ss_pred hhHHHHHHHHhcCC--CCCeEEEEecc
Q 021235 232 GTIAGLSLGSWLGT--LKAKVHAFSVC 256 (315)
Q Consensus 232 Gt~aGl~~~~k~~~--~~~rVigV~~~ 256 (315)
.++.|+..++++.+ .++.|+|++-.
T Consensus 197 ~~a~g~~~al~~~g~p~di~vig~d~~ 223 (276)
T 3ksm_A 197 STTIGALVAIRQSGMSKQFGFIGFDQT 223 (276)
T ss_dssp HHHHHHHHHHHHTTCTTSSEEEEESCC
T ss_pred hhhhHHHHHHHHcCCCCCeEEEEeCCC
Confidence 78899999999887 37889888654
No 64
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=73.92 E-value=19 Score=31.70 Aligned_cols=57 Identities=18% Similarity=-0.008 Sum_probs=35.4
Q ss_pred CCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcC
Q 021235 94 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 159 (315)
Q Consensus 94 G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~ 159 (315)
|...||| ||+ +--|+++|..-++.|.+++++-..... ...-...++..|.+++.+.-
T Consensus 7 gKvalVT-Gas-~GIG~aiA~~la~~Ga~Vv~~~~~~~~-------~~~~~~~i~~~g~~~~~~~~ 63 (254)
T 4fn4_A 7 NKVVIVT-GAG-SGIGRAIAKKFALNDSIVVAVELLEDR-------LNQIVQELRGMGKEVLGVKA 63 (254)
T ss_dssp TCEEEEE-TTT-SHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEe-CCC-CHHHHHHHHHHHHcCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEEc
Confidence 4444565 544 568999999999999987665432211 11234556777888766553
No 65
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=73.70 E-value=17 Score=33.65 Aligned_cols=63 Identities=11% Similarity=-0.037 Sum_probs=42.8
Q ss_pred HHHHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEE
Q 021235 83 LEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 157 (315)
Q Consensus 83 l~~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v 157 (315)
+..++..+.+.|.+.+| .|+..|.-|++.+..|+.+|.+++++... ..+...++.+||+.++.
T Consensus 160 a~~~~~~~~~~g~~vlV-~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~-----------~~~~~~~~~lGa~~~~~ 222 (379)
T 3iup_A 160 ALGMVETMRLEGHSALV-HTAAASNLGQMLNQICLKDGIKLVNIVRK-----------QEQADLLKAQGAVHVCN 222 (379)
T ss_dssp HHHHHHHHHHTTCSCEE-ESSTTSHHHHHHHHHHHHHTCCEEEEESS-----------HHHHHHHHHTTCSCEEE
T ss_pred HHHHHHHhccCCCEEEE-ECCCCCHHHHHHHHHHHHCCCEEEEEECC-----------HHHHHHHHhCCCcEEEe
Confidence 34455555556655555 43234788999999999999986666432 13688889999986553
No 66
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=72.62 E-value=41 Score=29.95 Aligned_cols=152 Identities=13% Similarity=0.064 Sum_probs=79.5
Q ss_pred HHHHHHc-CCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCccc---CCC-------CCc----cchHHHHHhCC
Q 021235 87 MADAVAQ-GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLV---DQD-------PGL----IGNLLVERLVG 151 (315)
Q Consensus 87 l~~a~~~-G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~---~~~-------p~~----~~n~~~~r~~G 151 (315)
+.+..++ +++.|| |...+....+++-.+.+.+++.+.+........ ... +.. ..-...+..+|
T Consensus 81 ~~~l~~~~~v~~ii--g~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 158 (386)
T 3sg0_A 81 ARKLLSEEKVDVLI--GSSLTPVSLPLIDIAAEAKTPLMTMAAAAILVAPMDERRKWVYKVVPNDDIMAEAIGKYIAKTG 158 (386)
T ss_dssp HHHHHHTSCCSEEE--CCSSHHHHHHHHHHHHHTTCCEEECCCCGGGTCSCCTTGGGEEECSCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHhhcCceEEE--CCCCchhHHHHHHHHHhcCCeEEEecCCCccccccCCCCCcEEecCCCcHHHHHHHHHHHHhcC
Confidence 4444555 788888 444466777888899999999887643211000 000 100 01123344567
Q ss_pred CE-EEEEc-CCcccccChHHHHHHHHHHHHHhCCC---cEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEE
Q 021235 152 AH-IELIS-KEEYSKIGSVTLTNILKEKLLKEGRR---PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVV 226 (315)
Q Consensus 152 Ae-V~~v~-~~~~~~~~~~~~~~~~~~~l~~~~~~---~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv 226 (315)
.+ |.++. +..|. ....+...+.+++.+.. ...++.+..+. .....+|.+ .++|.||+
T Consensus 159 ~~~ia~i~~~~~~~----~~~~~~~~~~l~~~g~~v~~~~~~~~~~~d~------~~~~~~~~~--------~~~dav~~ 220 (386)
T 3sg0_A 159 AKKVGYIGFSDAYG----EGYYKVLAAAAPKLGFELTTHEVYARSDASV------TGQVLKIIA--------TKPDAVFI 220 (386)
T ss_dssp CCEEEEEEESSHHH----HHHHHHHHHHHHHHTCEECCCEEECTTCSCC------HHHHHHHHH--------TCCSEEEE
T ss_pred CCEEEEEecCchHH----HHHHHHHHHHHHHcCCEEEEEEeeCCCCCcH------HHHHHHHHh--------cCCCEEEE
Confidence 54 54443 22221 12334444455554421 11233322221 112223322 25898887
Q ss_pred eCCchhhHHHHHHHHhcCCCCCeEEEEeccCCc
Q 021235 227 ACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 259 (315)
Q Consensus 227 ~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~ 259 (315)
+ +.+..+.++...+++.+.+.+++++....+.
T Consensus 221 ~-~~~~~a~~~~~~~~~~g~~~~~~~~~~~~~~ 252 (386)
T 3sg0_A 221 A-SAGTPAVLPQKALRERGFKGAIYQTHGVATE 252 (386)
T ss_dssp E-CCSGGGHHHHHHHHHTTCCSEEECCGGGCSH
T ss_pred e-cCcchHHHHHHHHHHcCCCCcEEeccccCCH
Confidence 5 4566788999999998888888776554443
No 67
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=72.47 E-value=50 Score=29.00 Aligned_cols=150 Identities=12% Similarity=-0.005 Sum_probs=80.3
Q ss_pred HHHHHHc-CCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcc-cCCCC-------Cc----cchHHHHHhCCCE
Q 021235 87 MADAVAQ-GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-VDQDP-------GL----IGNLLVERLVGAH 153 (315)
Q Consensus 87 l~~a~~~-G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~-~~~~p-------~~----~~n~~~~r~~GAe 153 (315)
+.+..++ +++.||- ...+....+++-.+.+.+++++.+... +. ....+ .. ..-...+..+|.+
T Consensus 61 ~~~l~~~~~v~~iig--~~~s~~~~~~~~~~~~~~ip~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 136 (362)
T 3snr_A 61 ARRFVTESKADVIMG--SSVTPPSVAISNVANEAQIPHIALAPL--PITPERAKWSVVMPQPIPIMGKVLYEHMKKNNVK 136 (362)
T ss_dssp HHHHHHTSCCSEEEE--CSSHHHHHHHHHHHHHHTCCEEESSCC--CCCTTTTTTEEECSCCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhccCceEEEc--CCCcHHHHHHHHHHHHcCccEEEecCC--ccccCCCCcEEecCCChHHHHHHHHHHHHhcCCC
Confidence 4444555 7888883 334566777888889999998775422 10 00001 00 1113344456754
Q ss_pred -EEEEcC-CcccccChHHHHHHHHHHHHHhCCCc---EEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeC
Q 021235 154 -IELISK-EEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVAC 228 (315)
Q Consensus 154 -V~~v~~-~~~~~~~~~~~~~~~~~~l~~~~~~~---y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~v 228 (315)
|.++.. ..|. ....+...+.+++.+... ..++.+..+. .....+|.+ .++|.||++
T Consensus 137 ~ia~i~~~~~~~----~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~------~~~~~~l~~--------~~~dav~~~- 197 (362)
T 3snr_A 137 TVGYIGYSDSYG----DLWFNDLKKQGEAMGLKIVGEERFARPDTSV------AGQALKLVA--------ANPDAILVG- 197 (362)
T ss_dssp EEEEEEESSHHH----HHHHHHHHHHHHHTTCEEEEEEEECTTCSCC------HHHHHHHHH--------HCCSEEEEE-
T ss_pred EEEEEecCchHH----HHHHHHHHHHHHHcCCEEEEEeecCCCCCCH------HHHHHHHHh--------cCCCEEEEe-
Confidence 544432 1221 123344455566654321 1223322221 122233322 248988875
Q ss_pred CchhhHHHHHHHHhcCCCCCeEEEEeccCCc
Q 021235 229 GSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 259 (315)
Q Consensus 229 GtGGt~aGl~~~~k~~~~~~rVigV~~~g~~ 259 (315)
+.+..+.++...+++.+.+++++++....+.
T Consensus 198 ~~~~~a~~~~~~~~~~g~~~p~i~~~g~~~~ 228 (362)
T 3snr_A 198 ASGTAAALPQTTLRERGYNGLIYQTHGAASM 228 (362)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEEECGGGCSH
T ss_pred cCcchHHHHHHHHHHcCCCccEEeccCcCcH
Confidence 4677899999999999888888766554443
No 68
>3hu5_A Isochorismatase family protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.50A {Desulfovibrio vulgaris}
Probab=72.46 E-value=4.1 Score=34.71 Aligned_cols=85 Identities=21% Similarity=0.245 Sum_probs=52.8
Q ss_pred CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEecCCchhHHH-HHHHHHHHHcCCeEEEEecCCCcccCCCC
Q 021235 60 NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDP 138 (315)
Q Consensus 60 g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg-~alA~aa~~lGl~~~ivvp~~~~~~~~~p 138 (315)
+-.++.|.- . ++|..-.+..+| ++.|+++||.+|- ..|.| .++|.-|..+|++++++-+......++
T Consensus 100 ~~~vi~K~~-~-----saF~~t~L~~~L---~~~gi~~lvi~G~-~T~~CV~~Ta~da~~~Gy~V~vv~Da~as~~~~-- 167 (204)
T 3hu5_A 100 GETVLVKTR-F-----SAFMGTECDMLL---RRRGVDTLLVSGT-QYPNCIRGTAVDAFALDYDVVVVTDACSARTPG-- 167 (204)
T ss_dssp TCEEEECSS-S-----STTTTSSHHHHH---HHTTCCEEEEEEE-CTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--
T ss_pred CCEEEECCc-c-----CCCCCcCHHHHH---HhCCCCeEEEeee-ccchHHHHHHHHHHHCCCEEEEehhhhCCCCHH--
Confidence 446677762 2 333222333333 4579999998864 45555 578888999999999998765432110
Q ss_pred CccchHHHHHhCCCEEEE
Q 021235 139 GLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 139 ~~~~n~~~~r~~GAeV~~ 156 (315)
.....+..++..|++|+-
T Consensus 168 ~h~~al~~m~~~g~~v~t 185 (204)
T 3hu5_A 168 VAESNINDMRAMGITCVP 185 (204)
T ss_dssp HHHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHHHHHhCCEEEE
Confidence 012346777888988764
No 69
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=71.90 E-value=54 Score=29.14 Aligned_cols=151 Identities=10% Similarity=0.043 Sum_probs=78.8
Q ss_pred HHHHHH-cCCCEEEecCCchhHHHHHHHH--HHHHcCCeEEEEecCCCcccC-C-----CCCc----cchHHHHHhCCCE
Q 021235 87 MADAVA-QGADCIITIGGIQSNHCRAAAV--AAKYLNLDCYLILRTSKVLVD-Q-----DPGL----IGNLLVERLVGAH 153 (315)
Q Consensus 87 l~~a~~-~G~~~vVt~g~s~GNhg~alA~--aa~~lGl~~~ivvp~~~~~~~-~-----~p~~----~~n~~~~r~~GAe 153 (315)
+.+..+ .+++.|| |..++....+++- .+.+.+++++..........+ + .+.. ..-...+..+|.+
T Consensus 65 ~~~l~~~~~v~~ii--g~~~s~~~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~~ 142 (364)
T 3lop_A 65 VRDMARVDNPVALL--TVVGTANVEALMREGVLAEARLPLVGPATGASSMTTDPLVFPIKASYQQEIDKMITALVTIGVT 142 (364)
T ss_dssp HHHHHHHSCEEEEE--CCCCHHHHHHHHHTTHHHHHTCCEESCSCCCGGGGSCTTEECCSCCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhhcCcEEEE--ecCCCHHHHhhCchhhHHhcCCcEEEcccCcHhhccCCcEEEeCCChHHHHHHHHHHHHHcCCc
Confidence 333444 3666666 4344667778888 899999997765432210000 0 0110 1113344456754
Q ss_pred -EEEEc-CCcccccChHHHHHHHHHHHHHhCCCc---EEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeC
Q 021235 154 -IELIS-KEEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVAC 228 (315)
Q Consensus 154 -V~~v~-~~~~~~~~~~~~~~~~~~~l~~~~~~~---y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~v 228 (315)
|.++. +..|. ....+...+.+++.+... ..++.+..+. .... +++.. ..+|.||++
T Consensus 143 ~iaii~~~~~~g----~~~~~~~~~~~~~~G~~v~~~~~~~~~~~d~------~~~~----~~l~~----~~~d~v~~~- 203 (364)
T 3lop_A 143 RIGVLYQEDALG----KEAITGVERTLKAHALAITAMASYPRNTANV------GPAV----DKLLA----ADVQAIFLG- 203 (364)
T ss_dssp CEEEEEETTHHH----HHHHHHHHHHHHTTTCCCSEEEEECTTSCCC------HHHH----HHHHH----SCCSEEEEE-
T ss_pred eEEEEEeCchhh----HHHHHHHHHHHHHcCCcEEEEEEecCCCccH------HHHH----HHHHh----CCCCEEEEe-
Confidence 54443 22221 123344444555544321 1233322221 1222 23322 358988885
Q ss_pred CchhhHHHHHHHHhcCCCCCeEEEEeccCC
Q 021235 229 GSGGTIAGLSLGSWLGTLKAKVHAFSVCDD 258 (315)
Q Consensus 229 GtGGt~aGl~~~~k~~~~~~rVigV~~~g~ 258 (315)
+.+..+.++...+++.+.++++++.+....
T Consensus 204 ~~~~~a~~~~~~~~~~g~~~~~i~~~~~~~ 233 (364)
T 3lop_A 204 ATAEPAAQFVRQYRARGGEAQLLGLSSIDP 233 (364)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECTTSCH
T ss_pred cCcHHHHHHHHHHHHcCCCCeEEEeccCCh
Confidence 467788999999999988888887665443
No 70
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=71.82 E-value=49 Score=28.66 Aligned_cols=36 Identities=11% Similarity=-0.094 Sum_probs=28.6
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEecc
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVC 256 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~~ 256 (315)
.++|+||| .+..++.|+..++++.+. ++.|+|++-.
T Consensus 201 ~~~~ai~~--~nd~~A~g~~~al~~~g~~vP~di~vig~D~~ 240 (305)
T 3huu_A 201 HMPSVIIT--SDVMLNMQLLNVLYEYQLRIPEDIQTATFNTS 240 (305)
T ss_dssp CCCSEEEE--SSHHHHHHHHHHHHHTTCCTTTTCEEEEESCS
T ss_pred CCCCEEEE--CChHHHHHHHHHHHHcCCCCCcceEEEEECCc
Confidence 46899997 567788899999998763 6789998743
No 71
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=71.07 E-value=20 Score=31.62 Aligned_cols=75 Identities=15% Similarity=-0.006 Sum_probs=41.4
Q ss_pred CCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHH
Q 021235 94 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNI 173 (315)
Q Consensus 94 G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~ 173 (315)
|...||| |++ +--|+++|...++.|.++++.-..... .......++..|.+++.+.-+-- ..+.+++
T Consensus 9 gKvalVT-Gas-~GIG~aia~~la~~Ga~Vvi~~~~~~~-------~~~~~~~l~~~g~~~~~~~~Dv~----~~~~v~~ 75 (255)
T 4g81_D 9 GKTALVT-GSA-RGLGFAYAEGLAAAGARVILNDIRATL-------LAESVDTLTRKGYDAHGVAFDVT----DELAIEA 75 (255)
T ss_dssp TCEEEET-TCS-SHHHHHHHHHHHHTTCEEEECCSCHHH-------HHHHHHHHHHTTCCEEECCCCTT----CHHHHHH
T ss_pred CCEEEEe-CCC-cHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEEeeCC----CHHHHHH
Confidence 4334554 544 678999999999999886665322110 11234556667777766653211 1233445
Q ss_pred HHHHHHHh
Q 021235 174 LKEKLLKE 181 (315)
Q Consensus 174 ~~~~l~~~ 181 (315)
+.++..++
T Consensus 76 ~~~~~~~~ 83 (255)
T 4g81_D 76 AFSKLDAE 83 (255)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 55555544
No 72
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=70.85 E-value=51 Score=28.44 Aligned_cols=37 Identities=14% Similarity=-0.010 Sum_probs=29.4
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEeccC
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVCD 257 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~~g 257 (315)
.++|+|||. +..++.|+..++++.+. ++.|+|++-..
T Consensus 186 ~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~D~~~ 226 (294)
T 3qk7_A 186 VPPTAIITD--CNMLGDGVASALDKAGLLGGEGISLIAYDGLP 226 (294)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCSSTTSCEEEEETCSC
T ss_pred CCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEeecCcc
Confidence 468999974 67888999999998873 67899998553
No 73
>3o94_A Nicotinamidase; hydrolase; 1.60A {Streptococcus pneumoniae} PDB: 3o90_A 3o91_A* 3o92_A* 3o93_A* 3s2s_A
Probab=70.84 E-value=5.9 Score=34.12 Aligned_cols=63 Identities=14% Similarity=0.052 Sum_probs=42.8
Q ss_pred HHcCCCEEEecCCchhHHHH-HHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHh-CCCEEEE
Q 021235 91 VAQGADCIITIGGIQSNHCR-AAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERL-VGAHIEL 156 (315)
Q Consensus 91 ~~~G~~~vVt~g~s~GNhg~-alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~-~GAeV~~ 156 (315)
++.|+++|+.+|- ..|.|. ++|.-|..+|++++++.+.......+ .....+..|+. +|+.|+-
T Consensus 139 ~~~gi~~lvi~G~-~T~~CV~~Ta~~a~~~Gy~v~vv~Da~~~~~~~--~h~~aL~~m~~~~G~~i~t 203 (211)
T 3o94_A 139 RERRVSTVILTGV-LTDISVLHTAIDAYNLGYDIEIVKPAVASIWPE--NHQFALGHFKNTLGAKLVD 203 (211)
T ss_dssp HHTTCCEEEEEEE-CTTTHHHHHHHHHHHTTCEEEEEEEEEECSCHH--HHHHHHHHHHHTSCCEEEC
T ss_pred HhCCCCeEEEEee-ccChHHHHHHHHHHHCCCEEEEechhhcCCCHH--HHHHHHHHHHHHCCcEEec
Confidence 4578999998764 455554 78888999999999987755432110 11234677787 8988754
No 74
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=70.58 E-value=23 Score=31.61 Aligned_cols=147 Identities=13% Similarity=0.036 Sum_probs=77.7
Q ss_pred HHHHHHc-CCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCC--CC-------Cc----cchHHHHHhCCC
Q 021235 87 MADAVAQ-GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQ--DP-------GL----IGNLLVERLVGA 152 (315)
Q Consensus 87 l~~a~~~-G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~--~p-------~~----~~n~~~~r~~GA 152 (315)
+.+..++ +++.||- ...+....+++-.+...+++++.+.......... .+ .. ..-...+..+|.
T Consensus 74 ~~~l~~~~~v~~iig--~~~s~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 151 (375)
T 4evq_A 74 TTKLIQSEKADVLIG--TVHSGVAMAMVKIAREDGIPTIVPNAGADIITRAMCAPNVFRTSFANGQIGRATGDAMIKAGL 151 (375)
T ss_dssp HHCCCCCSCCSEEEE--CSSHHHHHHHHHHHHHHCCCEEESSCCCGGGGTTTCCTTEEESSCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCCceEEEc--CCccHHHHHHHHHHHHcCceEEecCCCChhhcccCCCCCEEEeeCChHhHHHHHHHHHHHcCC
Confidence 3334443 7777773 3345677788888999999987654221110000 01 00 011234445575
Q ss_pred E-EEEEcC-CcccccChHHHHHHHHHHHHHhCCCc---EEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEe
Q 021235 153 H-IELISK-EEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVA 227 (315)
Q Consensus 153 e-V~~v~~-~~~~~~~~~~~~~~~~~~l~~~~~~~---y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~ 227 (315)
+ |.++.. ..|. ..+.+...+.+++.+... ..++.+..+. .....+|.+ .++|.||+.
T Consensus 152 ~~ia~i~~~~~~~----~~~~~~~~~~l~~~G~~v~~~~~~~~~~~d~------~~~~~~l~~--------~~~dai~~~ 213 (375)
T 4evq_A 152 KKAVTVTWKYAAG----EEMVSGFKKSFTAGKGEVVKDITIAFPDVEF------QSALAEIAS--------LKPDCVYAF 213 (375)
T ss_dssp CEEEEEEESSHHH----HHHHHHHHHHHHHTTCEEEEEEEECTTCCCC------HHHHHHHHH--------HCCSEEEEE
T ss_pred cEEEEEecCchHH----HHHHHHHHHHHHHcCCeEEEEEecCCCCccH------HHHHHHHHh--------cCCCEEEEe
Confidence 4 544432 1121 123344455566654321 1233332221 122223322 248998885
Q ss_pred CCchhhHHHHHHHHhcCCCCCeEEEEe
Q 021235 228 CGSGGTIAGLSLGSWLGTLKAKVHAFS 254 (315)
Q Consensus 228 vGtGGt~aGl~~~~k~~~~~~rVigV~ 254 (315)
+++..+.++...+++.+.++.+++..
T Consensus 214 -~~~~~a~~~~~~~~~~g~~vp~~~~~ 239 (375)
T 4evq_A 214 -FSGGGALKFIKDYAAANLGIPLWGPG 239 (375)
T ss_dssp -CCTHHHHHHHHHHHHTTCCCCEEEEG
T ss_pred -cCcchHHHHHHHHHHcCCCceEEecC
Confidence 55688999999999999889998875
No 75
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=70.49 E-value=33 Score=32.58 Aligned_cols=100 Identities=15% Similarity=0.065 Sum_probs=60.1
Q ss_pred CEEEecCCchhHHHHHHHHHHH-HcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHH
Q 021235 96 DCIITIGGIQSNHCRAAAVAAK-YLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNIL 174 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~-~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~ 174 (315)
++++..|+| +..|+|.|.+.+ ..|-..+++..+..+..+ +. ....|. .....
T Consensus 51 K~vLVtGaS-sGiGlA~AialAf~~GA~vi~v~~~~~~~~~-------~~-------------atag~~------~~~a~ 103 (401)
T 4ggo_A 51 KNVLVLGCS-NGYGLASRITAAFGYGAATIGVSFEKAGSET-------KY-------------GTPGWY------NNLAF 103 (401)
T ss_dssp CEEEEESCS-SHHHHHHHHHHHHHHCCEEEEEECCCCCCSS-------SC-------------CCHHHH------HHHHH
T ss_pred CEEEEECCC-CcHHHHHHHHHHhhCCCCEEEEecCCccccc-------cc-------------ccccch------hHHHH
Confidence 444444554 578888887766 678888877765543210 00 000121 11334
Q ss_pred HHHHHHhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCch
Q 021235 175 KEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSG 231 (315)
Q Consensus 175 ~~~l~~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtG 231 (315)
.+.+++.|.....++.+-.++...+ .+..+|.+++ +.+|.+|-+++.+
T Consensus 104 ~~~i~~~G~~a~~i~~Dv~d~e~i~---~vi~~i~~~~------G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 104 DEAAKREGLYSVTIDGDAFSDEIKA---QVIEEAKKKG------IKFDLIVYSLASP 151 (401)
T ss_dssp HHHHHHHTCCEEEEESCTTSHHHHH---HHHHHHHHTT------CCEEEEEECCCCS
T ss_pred HHHHHHcCCCceeEeCCCCCHHHHH---HHHHHHHHhc------CCCCEEEEecccc
Confidence 4556667877778877666665443 3556666654 5799999999987
No 76
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=70.42 E-value=44 Score=29.07 Aligned_cols=32 Identities=19% Similarity=0.118 Sum_probs=23.8
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
..||| |++ +--|.++|..-.+.|.+++++-..
T Consensus 13 ~~lVT-Gas-~gIG~aia~~la~~G~~V~~~~~~ 44 (286)
T 3uve_A 13 VAFVT-GAA-RGQGRSHAVRLAQEGADIIAVDIC 44 (286)
T ss_dssp EEEEE-STT-SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred EEEEe-CCC-chHHHHHHHHHHHCCCeEEEEecc
Confidence 34554 544 678999999999999998777543
No 77
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=69.45 E-value=55 Score=28.24 Aligned_cols=156 Identities=7% Similarity=-0.042 Sum_probs=76.3
Q ss_pred HHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCccc-CCCC---Cc--cch--HHHHHhCCC-EEEE
Q 021235 86 LMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLV-DQDP---GL--IGN--LLVERLVGA-HIEL 156 (315)
Q Consensus 86 ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~-~~~p---~~--~~n--~~~~r~~GA-eV~~ 156 (315)
++....+++++.||..+... +. .....++..|++++++-....... .... +. .+. ...+...|. +|.+
T Consensus 60 ~~~~l~~~~vdGiI~~~~~~-~~--~~~~~l~~~~iPvV~i~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~ 136 (295)
T 3hcw_A 60 VYKMIKQRMVDAFILLYSKE-ND--PIKQMLIDESMPFIVIGKPTSDIDHQFTHIDNDNILASENLTRHVIEQGVDELIF 136 (295)
T ss_dssp HHHHHHTTCCSEEEESCCCT-TC--HHHHHHHHTTCCEEEESCCCSSGGGGSCEEEECHHHHHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHhCCcCEEEEcCccc-Ch--HHHHHHHhCCCCEEEECCCCccccCCceEEecCcHHHHHHHHHHHHHcCCccEEE
Confidence 35556667888888664322 21 333445677888877643321100 0000 00 011 112223354 4555
Q ss_pred EcCC-cccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHH
Q 021235 157 ISKE-EYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIA 235 (315)
Q Consensus 157 v~~~-~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~a 235 (315)
+... .+. ...++.+-..+.+++.+....++. +..+. ..|+ ....++.++.+. ..++|+||+ .+..++.
T Consensus 137 i~~~~~~~--~~~~R~~Gf~~al~~~g~~~~~~~-~~~~~--~~~~-~~~~~~l~~~~~---~~~~~ai~~--~~d~~A~ 205 (295)
T 3hcw_A 137 ITEKGNFE--VSKDRIQGFETVASQFNLDYQIIE-TSNER--EVIL-NYMQNLHTRLKD---PNIKQAIIS--LDAMLHL 205 (295)
T ss_dssp EEESSCCH--HHHHHHHHHHHHHHHTTCEEEEEE-ECSCH--HHHH-HHHHHHHHHHTC---TTSCEEEEE--SSHHHHH
T ss_pred EcCCccch--hHHHHHHHHHHHHHHcCCCeeEEe-ccCCH--HHHH-HHHHHHHhhccc---CCCCcEEEE--CChHHHH
Confidence 5421 111 112233444445555442222221 11122 2233 345566555421 136899886 5678899
Q ss_pred HHHHHHhcCCC----CCeEEEEec
Q 021235 236 GLSLGSWLGTL----KAKVHAFSV 255 (315)
Q Consensus 236 Gl~~~~k~~~~----~~rVigV~~ 255 (315)
|+..++++.+. ++.|+|++-
T Consensus 206 g~~~al~~~g~~vP~di~vig~D~ 229 (295)
T 3hcw_A 206 AILSVLYELNIEIPKDVMTATFND 229 (295)
T ss_dssp HHHHHHHHTTCCTTTTEEEEEECC
T ss_pred HHHHHHHHcCCCCCCceEEEEeCC
Confidence 99999998873 577888874
No 78
>3eef_A N-carbamoylsarcosine amidase related protein; structural genomics, protein structure initiative, midwest center for structural genomics; 2.35A {Thermoplasma acidophilum}
Probab=69.16 E-value=11 Score=31.26 Aligned_cols=63 Identities=22% Similarity=0.167 Sum_probs=43.4
Q ss_pred HHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHh-CCCEEEEEc
Q 021235 91 VAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERL-VGAHIELIS 158 (315)
Q Consensus 91 ~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~-~GAeV~~v~ 158 (315)
++.|.++||.+|-....=-.++|.-|..+|++++++-+.... ++.. ... ..|+. +|++|+-..
T Consensus 106 ~~~gi~~lii~G~~T~~CV~~Ta~da~~~Gy~V~vv~Da~as--~~~~--~~a-~~m~~~~ga~v~~~~ 169 (182)
T 3eef_A 106 RANGIDTVVLIGLDADICVRHTAADALYRNYRIIVVEDAVAA--RIDP--NWK-DYFTRVYGATVKRSD 169 (182)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEEC--SSCT--THH-HHHHHHHCCEEECTT
T ss_pred HhcCCCeEEEEEeccCHHHHHHHHHHHHCCCEEEEehhhcCC--HHHH--HHH-HHHHHhcCcEEeEHH
Confidence 457999999876444334457888899999999998876544 1221 223 67777 799887544
No 79
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=68.85 E-value=12 Score=33.91 Aligned_cols=52 Identities=21% Similarity=0.169 Sum_probs=39.4
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcC
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 159 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~ 159 (315)
++|+..|+ |--|...+..|+.+|.+.++++.... .|..+++.+||+.++...
T Consensus 162 ~~VlV~Ga--G~vG~~aiq~ak~~G~~~vi~~~~~~----------~k~~~a~~lGa~~~i~~~ 213 (346)
T 4a2c_A 162 KNVIIIGA--GTIGLLAIQCAVALGAKSVTAIDISS----------EKLALAKSFGAMQTFNSS 213 (346)
T ss_dssp SEEEEECC--SHHHHHHHHHHHHTTCSEEEEEESCH----------HHHHHHHHTTCSEEEETT
T ss_pred CEEEEECC--CCcchHHHHHHHHcCCcEEEEEechH----------HHHHHHHHcCCeEEEeCC
Confidence 55655554 56888999999999999888876542 368899999998766443
No 80
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=68.83 E-value=53 Score=27.86 Aligned_cols=157 Identities=8% Similarity=-0.011 Sum_probs=75.5
Q ss_pred HHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCC-ccchH-------HHHHhC--C-CEE
Q 021235 86 LMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPG-LIGNL-------LVERLV--G-AHI 154 (315)
Q Consensus 86 ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~-~~~n~-------~~~r~~--G-AeV 154 (315)
.+.....++++.||..+. ..+........++..|++++++-..... ....+. ...|. ..+... | .+|
T Consensus 49 ~i~~l~~~~vdgiIi~~~-~~~~~~~~~~~~~~~~iPvV~i~~~~~~-~~~~~~V~~D~~~~g~~a~~~L~~~g~g~~~I 126 (271)
T 2dri_A 49 NVQDLTVRGTKILLINPT-DSDAVGNAVKMANQANIPVITLDRQATK-GEVVSHIASDNVLGGKIAGDYIAKKAGEGAKV 126 (271)
T ss_dssp HHHHHTTTTEEEEEECCS-STTTTHHHHHHHHHTTCCEEEESSCCSS-SCCSEEEEECHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHHHHcCCCEEEEeCC-ChHHHHHHHHHHHHCCCcEEEecCCCCC-CceeEEEecChHHHHHHHHHHHHHHcCCCCeE
Confidence 345555677888886532 2222122334456689998877432111 000000 00111 111222 3 477
Q ss_pred EEEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhH
Q 021235 155 ELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTI 234 (315)
Q Consensus 155 ~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~ 234 (315)
.++....... ...++.+-..+.+++.+-....+..+..+. ..|| ....++.++- .+||+|||. +..++
T Consensus 127 ~~i~g~~~~~-~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~--~~~~-~~~~~ll~~~------~~~~ai~~~--nD~~A 194 (271)
T 2dri_A 127 IELQGIAGTS-AARERGEGFQQAVAAHKFNVLASQPADFDR--IKGL-NVMQNLLTAH------PDVQAVFAQ--NDEMA 194 (271)
T ss_dssp EEEECCTTCH-HHHHHHHHHHHHHHHHTCEEEEEEECTTCH--HHHH-HHHHHHHHHC------TTCCEEEES--SHHHH
T ss_pred EEEECCCCCc-cHhHHHHHHHHHHhcCCCEEEEecCCCCCH--HHHH-HHHHHHHHhC------CCccEEEEC--CCcHH
Confidence 7765321110 112233334445555442111111121122 2344 2344554431 368999876 56778
Q ss_pred HHHHHHHhcCCC-CCeEEEEecc
Q 021235 235 AGLSLGSWLGTL-KAKVHAFSVC 256 (315)
Q Consensus 235 aGl~~~~k~~~~-~~rVigV~~~ 256 (315)
.|+..++++.+. ++.|+|++-.
T Consensus 195 ~g~~~al~~~g~~dv~vvGfD~~ 217 (271)
T 2dri_A 195 LGALRALQTAGKSDVMVVGFDGT 217 (271)
T ss_dssp HHHHHHHHHHTCCSCEEEEEECC
T ss_pred HHHHHHHHHcCCCCcEEEEecCC
Confidence 899999988764 7889998753
No 81
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=68.82 E-value=56 Score=28.09 Aligned_cols=37 Identities=8% Similarity=-0.076 Sum_probs=29.4
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEeccC
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVCD 257 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~~g 257 (315)
.++|+|||. +..++.|+..++++.+. ++.|+|++-..
T Consensus 184 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~D~~~ 224 (289)
T 3k9c_A 184 TPPTAVVAF--NDRCATGVLDLLVRSGRDVPADISVVGYDDSR 224 (289)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEECCT
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEEECCHH
Confidence 468999875 56788899999998763 67899998653
No 82
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=68.42 E-value=52 Score=28.49 Aligned_cols=58 Identities=10% Similarity=-0.055 Sum_probs=35.3
Q ss_pred cCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 93 QGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 93 ~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
.|...||| |+ +|--|+++|..-.+.|.++++......... ..-...++..|.++..+.
T Consensus 26 ~~k~~lVT-Ga-s~GIG~aia~~la~~G~~Vv~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 83 (267)
T 3u5t_A 26 TNKVAIVT-GA-SRGIGAAIAARLASDGFTVVINYAGKAAAA------EEVAGKIEAAGGKALTAQ 83 (267)
T ss_dssp -CCEEEEE-SC-SSHHHHHHHHHHHHHTCEEEEEESSCSHHH------HHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEe-CC-CCHHHHHHHHHHHHCCCEEEEEcCCCHHHH------HHHHHHHHhcCCeEEEEE
Confidence 34444555 54 367899999999999999887654432110 112334556677776654
No 83
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=67.58 E-value=61 Score=28.04 Aligned_cols=55 Identities=11% Similarity=-0.020 Sum_probs=33.9
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
+++..|++ |--|.++|..-.+.|.++++......... ..-...++..|.++..+.
T Consensus 30 ~vlVTGas-~gIG~aia~~la~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 84 (269)
T 4dmm_A 30 IALVTGAS-RGIGRAIALELAAAGAKVAVNYASSAGAA------DEVVAAIAAAGGEAFAVK 84 (269)
T ss_dssp EEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCChHHH------HHHHHHHHhcCCcEEEEE
Confidence 34434544 67899999999999999887665332110 112344556677776654
No 84
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=67.29 E-value=31 Score=32.62 Aligned_cols=48 Identities=8% Similarity=-0.011 Sum_probs=36.2
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
.+||.+|. |..|+.+|..-...|++++++=.. ..++..++.+|.+++.
T Consensus 5 ~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d-----------~~~v~~~~~~g~~vi~ 52 (413)
T 3l9w_A 5 MRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHD-----------PDHIETLRKFGMKVFY 52 (413)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTCCEEEEECC-----------HHHHHHHHHTTCCCEE
T ss_pred CeEEEECC--CHHHHHHHHHHHHCCCCEEEEECC-----------HHHHHHHHhCCCeEEE
Confidence 45666775 899999999999999998887332 1257777888877665
No 85
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=67.25 E-value=59 Score=27.74 Aligned_cols=34 Identities=9% Similarity=-0.083 Sum_probs=27.9
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCC----CCCeEEEEe
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGT----LKAKVHAFS 254 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~----~~~rVigV~ 254 (315)
.++|+||+. +...+.|+..++++.+ .++.|+|++
T Consensus 187 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d 224 (289)
T 3g85_A 187 NTPKALFCN--SDSIALGVISVLNKRQISIPDDIEIVAIG 224 (289)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEE
T ss_pred CCCcEEEEc--CCHHHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 468999974 6778889999999876 367899998
No 86
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=67.16 E-value=66 Score=28.30 Aligned_cols=155 Identities=9% Similarity=-0.064 Sum_probs=76.3
Q ss_pred HHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCc-----ccCCCC----Cc--cch---HHHHHhCC
Q 021235 86 LMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKV-----LVDQDP----GL--IGN---LLVERLVG 151 (315)
Q Consensus 86 ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~-----~~~~~p----~~--~~n---~~~~r~~G 151 (315)
.+.....++++.||..+ . .+........+...|++++++.....+ .....+ +. .+. ..+.+.+|
T Consensus 96 ~i~~l~~~~vdgiIi~~-~-~~~~~~~~~~~~~~~ip~V~~~~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~~G 173 (342)
T 1jx6_A 96 SLMEALKSKSDYLIFTL-D-TTRHRKFVEHVLDSTNTKLILQNITTPVREWDKHQPFLYVGFDHAEGSRELATEFGKFFP 173 (342)
T ss_dssp HHHHHHHTTCSEEEECC-S-SSTTHHHHHHHHHHCSCEEEEETCCSCBGGGTTSCCSEEEECCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHhcCCCEEEEeC-C-hHhHHHHHHHHHHcCCCEEEEecCCCcccccccCCCceEEecCcHHHHHHHHHHHHHHcC
Confidence 45666678899988742 2 221122233345679998888554221 000000 00 011 11233356
Q ss_pred --CEEEEEcCCcccccChHHHHHHHHHHHHHhCC-CcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeC
Q 021235 152 --AHIELISKEEYSKIGSVTLTNILKEKLLKEGR-RPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVAC 228 (315)
Q Consensus 152 --AeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~-~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~v 228 (315)
.+|.++..... . ...++.+-..+.+++.+. ....+-.+..+. ..|+ ....+++++- .++|+|||.
T Consensus 174 g~~~I~~i~~~~~-~-~~~~R~~Gf~~~l~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~l~~~------~~~~ai~~~- 241 (342)
T 1jx6_A 174 KHTYYSVLYFSEG-Y-ISDVRGDTFIHQVNRDNNFELQSAYYTKATK--QSGY-DAAKASLAKH------PDVDFIYAC- 241 (342)
T ss_dssp TTCEEEEECCSTT-H-HHHHHHHHHHHHHHHHHCCEEEEEECCCSSH--HHHH-HHHHHHHHHC------CCCSEEEES-
T ss_pred CCceEEEEEcCCc-c-hhhHHHHHHHHHHHhCCCcEEEEEecCCCCH--HHHH-HHHHHHHHhC------CCccEEEEC-
Confidence 56777754211 1 112233334444554432 111121222222 2333 2344554431 468999974
Q ss_pred CchhhHHHHHHHHhcCC-CCCeEEEEec
Q 021235 229 GSGGTIAGLSLGSWLGT-LKAKVHAFSV 255 (315)
Q Consensus 229 GtGGt~aGl~~~~k~~~-~~~rVigV~~ 255 (315)
+..++.|+..++++.+ .++.|+|++-
T Consensus 242 -nd~~A~g~~~al~~~g~~di~vvg~D~ 268 (342)
T 1jx6_A 242 -STDVALGAVDALAELGREDIMINGWGG 268 (342)
T ss_dssp -SHHHHHHHHHHHHHHTCTTSEEBCSBC
T ss_pred -CChhHHHHHHHHHHcCCCCcEEEEeCC
Confidence 5678899999998876 4677777754
No 87
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=67.09 E-value=13 Score=34.58 Aligned_cols=48 Identities=19% Similarity=0.186 Sum_probs=35.1
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 155 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~ 155 (315)
++|+..| + |--|+..+..|+.+|.+.++.+.... .++++++.+||+++
T Consensus 187 ~~VlV~G-a-G~vG~~aiqlAk~~Ga~~Vi~~~~~~----------~~~~~a~~lGa~~i 234 (398)
T 1kol_A 187 STVYVAG-A-GPVGLAAAASARLLGAAVVIVGDLNP----------ARLAHAKAQGFEIA 234 (398)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHTTCSEEEEEESCH----------HHHHHHHHTTCEEE
T ss_pred CEEEEEC-C-cHHHHHHHHHHHHCCCCeEEEEcCCH----------HHHHHHHHcCCcEE
Confidence 4565565 3 78999999999999996555554332 36888899999843
No 88
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=67.03 E-value=68 Score=28.41 Aligned_cols=152 Identities=20% Similarity=0.172 Sum_probs=81.6
Q ss_pred HHHHHHc-CCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCC-------CCc--cch--HHHH-HhCCC-
Q 021235 87 MADAVAQ-GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQD-------PGL--IGN--LLVE-RLVGA- 152 (315)
Q Consensus 87 l~~a~~~-G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~-------p~~--~~n--~~~~-r~~GA- 152 (315)
+.+...+ +++.|| |..++....+++-.+...+++.+............. +.. .+. ...+ +.+|.
T Consensus 73 ~~~l~~~~~v~~ii--G~~~s~~~~~~~~~~~~~~iP~i~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~~g~~ 150 (366)
T 3td9_A 73 AARAIDKEKVLAII--GEVASAHSLAIAPIAEENKVPMVTPASTNPLVTQGRKFVSRVCFIDPFQGAAMAVFAYKNLGAK 150 (366)
T ss_dssp HHHHHHTSCCSEEE--ECSSHHHHHHHHHHHHHTTCCEEESSCCCGGGTTTCSSEEESSCCHHHHHHHHHHHHHHTSCCC
T ss_pred HHHHhccCCeEEEE--ccCCchhHHHHHHHHHhCCCeEEecCCCCccccCCCCCEEEEeCCcHHHHHHHHHHHHHhcCCc
Confidence 4444455 478887 334467788888999999999876643221110001 110 011 1223 44675
Q ss_pred EEEEE-c-CCcccccChHHHHHHHHHHHHHhCCCcE--EeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeC
Q 021235 153 HIELI-S-KEEYSKIGSVTLTNILKEKLLKEGRRPY--VIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVAC 228 (315)
Q Consensus 153 eV~~v-~-~~~~~~~~~~~~~~~~~~~l~~~~~~~y--~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~v 228 (315)
+|.++ . ...|.. ...+...+.+++.+.... .++.+..+. .....+|.+ .++|.||++
T Consensus 151 ~iaii~~~~~~~~~----~~~~~~~~~~~~~G~~v~~~~~~~~~~d~------~~~~~~l~~--------~~~d~v~~~- 211 (366)
T 3td9_A 151 RVVVFTDVEQDYSV----GLSNFFINKFTELGGQVKRVFFRSGDQDF------SAQLSVAMS--------FNPDAIYIT- 211 (366)
T ss_dssp EEEEEEETTCHHHH----HHHHHHHHHHHHTTCEEEEEEECTTCCCC------HHHHHHHHH--------TCCSEEEEC-
T ss_pred EEEEEEeCCCcHHH----HHHHHHHHHHHHCCCEEEEEEeCCCCccH------HHHHHHHHh--------cCCCEEEEc-
Confidence 45555 2 223321 223444455555443211 133322221 122233322 358988874
Q ss_pred CchhhHHHHHHHHhcCCCCCeEEEEeccCCc
Q 021235 229 GSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 259 (315)
Q Consensus 229 GtGGt~aGl~~~~k~~~~~~rVigV~~~g~~ 259 (315)
+.+..+.++...+++.+.++++++.+.....
T Consensus 212 ~~~~~a~~~~~~~~~~g~~~~~~~~~~~~~~ 242 (366)
T 3td9_A 212 GYYPEIALISRQARQLGFTGYILAGDGADAP 242 (366)
T ss_dssp SCHHHHHHHHHHHHHTTCCSEEEECGGGCST
T ss_pred cchhHHHHHHHHHHHcCCCceEEeeCCcCCH
Confidence 6778899999999999988898887655443
No 89
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=66.82 E-value=62 Score=27.85 Aligned_cols=56 Identities=11% Similarity=0.038 Sum_probs=34.4
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 159 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~ 159 (315)
+++..|++ |.-|.++|....+.|.+++++.+...... ......++..|.++..+.-
T Consensus 31 ~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~~~~~ 86 (271)
T 4iin_A 31 NVLITGAS-KGIGAEIAKTLASMGLKVWINYRSNAEVA------DALKNELEEKGYKAAVIKF 86 (271)
T ss_dssp EEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHHHTTCCEEEEEC
T ss_pred EEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHH------HHHHHHHHhcCCceEEEEC
Confidence 44444544 67999999999999999887766432110 1123345566766665543
No 90
>1nf9_A Phenazine biosynthesis protein PHZD; isochorismatase, enzyme, phenazine pathway, hydrolase; HET: BOG; 1.50A {Pseudomonas aeruginosa} SCOP: c.33.1.3 PDB: 1nf8_A* 3r77_A*
Probab=66.32 E-value=6.5 Score=33.34 Aligned_cols=62 Identities=15% Similarity=0.079 Sum_probs=40.1
Q ss_pred HHcCCCEEEecCCchhHHH-HHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEE
Q 021235 91 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 155 (315)
Q Consensus 91 ~~~G~~~vVt~g~s~GNhg-~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~ 155 (315)
+++|.++||.+| ...|.| .++|.-|..+|++++++-+.......+ .+...+..++..|++|+
T Consensus 138 ~~~gi~~lvi~G-~~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~--~h~~al~~~~~~~~~v~ 200 (207)
T 1nf9_A 138 RAAGRDQLVLCG-VYAHVGVLISTVDAYSNDIQPFLVADAIADFSEA--HHRMALEYAASRCAMVV 200 (207)
T ss_dssp HHTTCCEEEEEE-ECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--HHHHHHHHHHHHTCEEE
T ss_pred HHcCCCEEEEEe-eecChHHHHHHHHHHHCCCEEEEeCcccCCCCHH--HHHHHHHHHHHhCcEEc
Confidence 357999999876 455655 578888999999999987765432110 01223555556677654
No 91
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=66.22 E-value=69 Score=28.14 Aligned_cols=32 Identities=22% Similarity=0.149 Sum_probs=23.8
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
..||| |++ +--|.++|..-.+.|.+++++-..
T Consensus 30 ~~lVT-Gas-~GIG~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 30 VAFIT-GAA-RGQGRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp EEEEE-STT-SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred EEEEE-CCC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence 34554 554 678999999999999998877543
No 92
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=66.17 E-value=66 Score=27.90 Aligned_cols=56 Identities=14% Similarity=0.027 Sum_probs=34.1
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcC
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 159 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~ 159 (315)
..||| |++ |--|.++|....+.|.+++++........ ..-...++..|.++..+..
T Consensus 33 ~~lVT-Gas-~GIG~aia~~la~~G~~V~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~ 88 (271)
T 3v2g_A 33 TAFVT-GGS-RGIGAAIAKRLALEGAAVALTYVNAAERA------QAVVSEIEQAGGRAVAIRA 88 (271)
T ss_dssp EEEEE-TTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHHHTTCCEEEEEC
T ss_pred EEEEe-CCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHH------HHHHHHHHhcCCcEEEEEC
Confidence 34454 543 67899999999999998777654332110 1123445566777666543
No 93
>3tg2_A Vibriobactin-specific isochorismatase; hydrolase; HET: ISC PGE; 1.10A {Vibrio cholerae} PDB: 3tb4_A*
Probab=65.61 E-value=6.1 Score=34.27 Aligned_cols=63 Identities=13% Similarity=0.008 Sum_probs=42.3
Q ss_pred HHcCCCEEEecCCchhHHH-HHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 91 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 91 ~~~G~~~vVt~g~s~GNhg-~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++.|.++||.+|-. .|.| .++|.-|..+|++++++.+.......+ .....+..++..|+.|+-
T Consensus 134 ~~~gi~~lii~G~~-t~~CV~~Ta~da~~~Gy~v~vv~Da~as~~~~--~h~~aL~~~~~~~a~v~t 197 (223)
T 3tg2_A 134 RETGRDQLIITGVY-AHIGILSTALDAFMFDIQPFVIGDGVADFSLS--DHEFSLRYISGRTGAVKS 197 (223)
T ss_dssp HHHTCCEEEEEEEC-TTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--HHHHHHHHHHHHTCEEEC
T ss_pred HhcCcCceEEeecc-cChHHHHHHHHHHHCCCEEEEeCcccCCCCHH--HHHHHHHHHHHcCCEEec
Confidence 45799999988644 5555 488899999999999998765432111 112346666667777653
No 94
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=65.25 E-value=61 Score=27.91 Aligned_cols=55 Identities=16% Similarity=0.071 Sum_probs=34.7
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 159 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~ 159 (315)
.||| |+ +|--|.++|..-.+.|.++++......... ..-...++..|.++..+.-
T Consensus 21 ~lVT-Ga-s~gIG~aia~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 75 (270)
T 3is3_A 21 ALVT-GS-GRGIGAAVAVHLGRLGAKVVVNYANSTKDA------EKVVSEIKALGSDAIAIKA 75 (270)
T ss_dssp EEES-CT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHHHTTCCEEEEEC
T ss_pred EEEE-CC-CchHHHHHHHHHHHCCCEEEEEcCCCHHHH------HHHHHHHHhcCCcEEEEEc
Confidence 3444 54 468899999999999999887655432110 1123455667877766653
No 95
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=65.07 E-value=64 Score=27.42 Aligned_cols=160 Identities=18% Similarity=0.079 Sum_probs=76.2
Q ss_pred HHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcc-----cCCCCCccch---HHHHHhCC--CEE
Q 021235 85 FLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-----VDQDPGLIGN---LLVERLVG--AHI 154 (315)
Q Consensus 85 ~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~-----~~~~p~~~~n---~~~~r~~G--AeV 154 (315)
..+.....++++.||..+.. .+........++..|++++++-...... ...+....+. ..+.+.+| -+|
T Consensus 56 ~~~~~l~~~~vdgii~~~~~-~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~~~~~L~~~~G~~~~i 134 (289)
T 3brs_A 56 ELIEEAIKRKPDVILLAAAD-YEKTYDAAKEIKDAGIKLIVIDSGMKQDIADITVATDNIQAGIRIGAVTKNLVRKSGKI 134 (289)
T ss_dssp HHHHHHHHTCCSEEEECCSC-TTTTHHHHTTTGGGTCEEEEESSCCSSCCCSEEEECCHHHHHHHHHHHHHHHTSSSCEE
T ss_pred HHHHHHHHhCCCEEEEeCCC-hHHhHHHHHHHHHCCCcEEEECCCCCCCcceEEEeeChHHHHHHHHHHHHHHcCCCceE
Confidence 34556667889998876432 2221122333456799987764321110 0000000111 11233346 467
Q ss_pred EEEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhH
Q 021235 155 ELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTI 234 (315)
Q Consensus 155 ~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~ 234 (315)
.++.... ......++.+-..+.+++.+. .+ .+....+.....++ ....++.++- .++|+||+. +...+
T Consensus 135 ~~i~~~~-~~~~~~~R~~gf~~~l~~~g~-~~-~~~~~~~~~~~~~~-~~~~~~l~~~------~~~~ai~~~--~d~~a 202 (289)
T 3brs_A 135 GVISFVK-NSKTAMDREEGLKIGLSDDSN-KI-EAIYYCDSNYDKAY-DGTVELLTKY------PDISVMVGL--NQYSA 202 (289)
T ss_dssp EEEESCT-TSHHHHHHHHHHHHHHGGGGG-GE-EEEEECTTCHHHHH-HHHHHHHHHC------TTEEEEEES--SHHHH
T ss_pred EEEECCC-CCccHHHHHHHHHHHHHhCCC-cE-EeeecCCCCHHHHH-HHHHHHHHhC------CCceEEEEC--CCcch
Confidence 6665321 110111233333444444332 21 11100111112233 2344444331 358888874 56788
Q ss_pred HHHHHHHhcCCC--CCeEEEEeccC
Q 021235 235 AGLSLGSWLGTL--KAKVHAFSVCD 257 (315)
Q Consensus 235 aGl~~~~k~~~~--~~rVigV~~~g 257 (315)
.|+..++++.+. ++.|+|++-..
T Consensus 203 ~g~~~al~~~G~~~di~vvg~d~~~ 227 (289)
T 3brs_A 203 TGAARAIKDMSLEAKVKLVCIDSSM 227 (289)
T ss_dssp HHHHHHHHHTTCTTTSEEEEEESCS
T ss_pred HHHHHHHHhcCCCCCEEEEEECCCH
Confidence 899999998764 58899998654
No 96
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=65.04 E-value=67 Score=27.59 Aligned_cols=56 Identities=11% Similarity=0.020 Sum_probs=34.5
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 159 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~ 159 (315)
+++..|+ +|.-|.++|....+.|.++++......... ..-...++..|.++..+.-
T Consensus 28 ~vlITGa-s~gIG~a~a~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 83 (272)
T 4e3z_A 28 VVLVTGG-SRGIGAAVCRLAARQGWRVGVNYAANREAA------DAVVAAITESGGEAVAIPG 83 (272)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHHHTTCEEEEEEC
T ss_pred EEEEECC-CchHHHHHHHHHHHCCCEEEEEcCCChhHH------HHHHHHHHhcCCcEEEEEc
Confidence 3444454 478999999999999999877644332110 1123345556777766653
No 97
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=64.39 E-value=19 Score=33.05 Aligned_cols=39 Identities=23% Similarity=0.310 Sum_probs=32.8
Q ss_pred HcCCC-EEEecCCc----------------hhHHHHHHHHHHHHcCCeEEEEecCC
Q 021235 92 AQGAD-CIITIGGI----------------QSNHCRAAAVAAKYLNLDCYLILRTS 130 (315)
Q Consensus 92 ~~G~~-~vVt~g~s----------------~GNhg~alA~aa~~lGl~~~ivvp~~ 130 (315)
..|.+ .+||.|++ +|..|.++|-++.+.|..++++....
T Consensus 34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 46777 77888776 48999999999999999999887654
No 98
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=64.36 E-value=72 Score=27.72 Aligned_cols=54 Identities=20% Similarity=0.081 Sum_probs=33.0
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
..||| |+ +|--|.++|....+.|.+++++-+..... ......++..|.++..+.
T Consensus 34 ~~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~ 87 (276)
T 3r1i_A 34 RALIT-GA-STGIGKKVALAYAEAGAQVAVAARHSDAL-------QVVADEIAGVGGKALPIR 87 (276)
T ss_dssp EEEEE-ST-TSHHHHHHHHHHHHTTCEEEEEESSGGGG-------HHHHHHHHHTTCCCEEEE
T ss_pred EEEEe-CC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhcCCeEEEEE
Confidence 34454 54 36889999999999999977776532210 112334455666655554
No 99
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=64.24 E-value=6.8 Score=35.11 Aligned_cols=47 Identities=6% Similarity=-0.071 Sum_probs=35.9
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ |.-|++++..|+.+|.+.+.+. . . .+...++.+||+.+.
T Consensus 144 ~~VlV~Ga--G~vG~~a~qlak~~Ga~Vi~~~-~-~----------~~~~~~~~lGa~~v~ 190 (315)
T 3goh_A 144 REVLIVGF--GAVNNLLTQMLNNAGYVVDLVS-A-S----------LSQALAAKRGVRHLY 190 (315)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHTCEEEEEC-S-S----------CCHHHHHHHTEEEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCEEEEEE-C-h----------hhHHHHHHcCCCEEE
Confidence 56666665 8899999999999999766664 2 1 257788999998665
No 100
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=63.98 E-value=10 Score=34.44 Aligned_cols=49 Identities=20% Similarity=0.263 Sum_probs=36.5
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ +|.-|++++..|+.+|.+++++.+.. .+...++.+|++.+.
T Consensus 161 ~~VlV~Ga-sg~iG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~ga~~v~ 209 (342)
T 4eye_A 161 ETVLVLGA-AGGIGTAAIQIAKGMGAKVIAVVNRT-----------AATEFVKSVGADIVL 209 (342)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHTTCEEEEEESSG-----------GGHHHHHHHTCSEEE
T ss_pred CEEEEECC-CCHHHHHHHHHHHHcCCEEEEEeCCH-----------HHHHHHHhcCCcEEe
Confidence 56665654 47899999999999999876665432 257788889998665
No 101
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=63.94 E-value=16 Score=32.67 Aligned_cols=47 Identities=13% Similarity=0.094 Sum_probs=35.7
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
|+..|+ +|.-|++.+..|+.+|.+++.+.+.. .+.+.++.+||+.++
T Consensus 150 VlV~Ga-~G~vG~~aiqla~~~Ga~Vi~~~~~~-----------~~~~~~~~lGa~~vi 196 (324)
T 3nx4_A 150 VVVTGA-SGGVGSTAVALLHKLGYQVAAVSGRE-----------STHGYLKSLGANRIL 196 (324)
T ss_dssp EEESST-TSHHHHHHHHHHHHTTCCEEEEESCG-----------GGHHHHHHHTCSEEE
T ss_pred EEEECC-CcHHHHHHHHHHHHcCCEEEEEeCCH-----------HHHHHHHhcCCCEEE
Confidence 555554 47899999999999999877665432 257888999998665
No 102
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=63.93 E-value=73 Score=27.65 Aligned_cols=158 Identities=11% Similarity=0.082 Sum_probs=74.7
Q ss_pred HHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCc-----ccCCCCCccchH--H-HHHhC-C-CEEE
Q 021235 86 LMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKV-----LVDQDPGLIGNL--L-VERLV-G-AHIE 155 (315)
Q Consensus 86 ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~-----~~~~~p~~~~n~--~-~~r~~-G-AeV~ 155 (315)
.+.....++++.||..+.. .+........++..|++++++-..... ....+....+.. . +.+.+ | .+|.
T Consensus 49 ~i~~l~~~~vdgiIi~~~~-~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~d~~~~g~~a~~~L~~~~~G~~~I~ 127 (313)
T 2h3h_A 49 MLESFIAEGVNGIAIAPSD-PTAVIPTIKKALEMGIPVVTLDTDSPDSGRYVYIGTDNYQAGYTAGLIMKELLGGKGKVV 127 (313)
T ss_dssp HHHHHHHTTCSEEEECCSS-TTTTHHHHHHHHHTTCCEEEESSCCTTSCCSCEEECCHHHHHHHHHHHHHHHHTSCSEEE
T ss_pred HHHHHHHcCCCEEEEeCCC-hHHHHHHHHHHHHCCCeEEEeCCCCCCcceeEEECcCHHHHHHHHHHHHHHHcCCCCEEE
Confidence 3555667889998865432 222223344556789998876432111 000000001111 1 22221 4 3566
Q ss_pred EEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHH
Q 021235 156 LISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIA 235 (315)
Q Consensus 156 ~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~a 235 (315)
++.... ......++.+-..+.+++.+ .-+......+.....++ ....++.++- .++|+||+.. ...+.
T Consensus 128 ~i~~~~-~~~~~~~R~~gf~~~l~~~g--~~~~~~~~~~~~~~~~~-~~~~~~l~~~------~~~~ai~~~~--d~~a~ 195 (313)
T 2h3h_A 128 IGTGSL-TAMNSLQRIQGFKDAIKDSE--IEIVDILNDEEDGARAV-SLAEAALNAH------PDLDAFFGVY--AYNGP 195 (313)
T ss_dssp EEESCS-SCHHHHHHHHHHHHHHTTSS--CEEEEEEECSSCHHHHH-HHHHHHHHHC------TTCCEEEECS--TTHHH
T ss_pred EEECCC-CCccHHHHHHHHHHHhcCCC--CEEEEeecCCCCHHHHH-HHHHHHHHHC------cCceEEEEcC--CCccH
Confidence 665321 10011123233334444422 21111110111112233 2344554432 3689999864 45678
Q ss_pred HHHHHHhcCCC--CCeEEEEecc
Q 021235 236 GLSLGSWLGTL--KAKVHAFSVC 256 (315)
Q Consensus 236 Gl~~~~k~~~~--~~rVigV~~~ 256 (315)
|+..++++.+. ++.|+|++-.
T Consensus 196 g~~~al~~~G~p~dv~vvg~d~~ 218 (313)
T 2h3h_A 196 AQALVVKNAGKVGKVKIVCFDTT 218 (313)
T ss_dssp HHHHHHHHTTCTTTSEEEEECCC
T ss_pred HHHHHHHHcCCCCCeEEEEeCCC
Confidence 99999998763 6889998754
No 103
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=63.75 E-value=67 Score=27.16 Aligned_cols=55 Identities=13% Similarity=0.003 Sum_probs=33.5
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
+++..|+ +|--|.++|....+.|.++++......... ..-...++..|.++..+.
T Consensus 6 ~~lVTGa-s~gIG~~ia~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 60 (246)
T 3osu_A 6 SALVTGA-SRGIGRSIALQLAEEGYNVAVNYAGSKEKA------EAVVEEIKAKGVDSFAIQ 60 (246)
T ss_dssp EEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHHHTTSCEEEEE
T ss_pred EEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCCHHHH------HHHHHHHHhcCCcEEEEE
Confidence 3433454 467899999999999999887655432110 112334555677766554
No 104
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=63.72 E-value=13 Score=34.07 Aligned_cols=48 Identities=17% Similarity=0.155 Sum_probs=34.6
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ |.-|+.++..|+.+|.+.+.+.+.. .+...++.+||+.++
T Consensus 181 ~~VlV~Ga--G~vG~~~~qlak~~Ga~Vi~~~~~~-----------~~~~~~~~lGa~~v~ 228 (360)
T 1piw_A 181 KKVGIVGL--GGIGSMGTLISKAMGAETYVISRSS-----------RKREDAMKMGADHYI 228 (360)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHTCEEEEEESSS-----------TTHHHHHHHTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEEcCCH-----------HHHHHHHHcCCCEEE
Confidence 56666665 7899999999999999854443322 247778889997654
No 105
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=63.46 E-value=8.1 Score=35.01 Aligned_cols=49 Identities=16% Similarity=0.177 Sum_probs=35.6
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 157 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v 157 (315)
++|+..|+ |.-|.+++..|+.+|.+.+.+.... .+.+.++.+||+.++-
T Consensus 168 ~~VlV~Ga--G~vG~~a~qla~~~Ga~Vi~~~~~~-----------~~~~~~~~lGa~~~i~ 216 (340)
T 3s2e_A 168 QWVVISGI--GGLGHVAVQYARAMGLRVAAVDIDD-----------AKLNLARRLGAEVAVN 216 (340)
T ss_dssp SEEEEECC--STTHHHHHHHHHHTTCEEEEEESCH-----------HHHHHHHHTTCSEEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCeEEEEeCCH-----------HHHHHHHHcCCCEEEe
Confidence 45555553 6689999999999999765553321 3688899999987653
No 106
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=63.41 E-value=74 Score=27.52 Aligned_cols=35 Identities=17% Similarity=0.032 Sum_probs=28.0
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEec
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSV 255 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~ 255 (315)
.++|+|||. +..++.|+..++++.+. ++.|+|++-
T Consensus 196 ~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~D~ 234 (303)
T 3kke_A 196 DGPTAVVVA--SVNAAVGALSTALRLGLRVPEDLSIVGINT 234 (303)
T ss_dssp TSCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEESC
T ss_pred CCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEEEcC
Confidence 569999975 56788899999998773 678999864
No 107
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=63.40 E-value=15 Score=33.84 Aligned_cols=49 Identities=10% Similarity=0.055 Sum_probs=36.1
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 157 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v 157 (315)
++|+..|+ +|.-|++.+..|+.+|.+.+.+. . . .+..+++.+||+.++-
T Consensus 166 ~~VlV~Ga-~G~vG~~a~qla~~~Ga~Vi~~~-~-~----------~~~~~~~~lGa~~vi~ 214 (371)
T 3gqv_A 166 VYVLVYGG-STATATVTMQMLRLSGYIPIATC-S-P----------HNFDLAKSRGAEEVFD 214 (371)
T ss_dssp CEEEEEST-TSHHHHHHHHHHHHTTCEEEEEE-C-G----------GGHHHHHHTTCSEEEE
T ss_pred cEEEEECC-CcHHHHHHHHHHHHCCCEEEEEe-C-H----------HHHHHHHHcCCcEEEE
Confidence 45655554 47899999999999999876654 2 1 2578899999986553
No 108
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=63.29 E-value=8.2 Score=33.91 Aligned_cols=37 Identities=14% Similarity=0.163 Sum_probs=29.8
Q ss_pred CCCEEEecCC--------------chhHHHHHHHHHHHHcCCeEEEEecCC
Q 021235 94 GADCIITIGG--------------IQSNHCRAAAVAAKYLNLDCYLILRTS 130 (315)
Q Consensus 94 G~~~vVt~g~--------------s~GNhg~alA~aa~~lGl~~~ivvp~~ 130 (315)
|...+||.|+ |+|-.|.++|.++++.|.+++++....
T Consensus 3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 5455777654 278999999999999999999887654
No 109
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=63.13 E-value=68 Score=27.03 Aligned_cols=36 Identities=14% Similarity=0.067 Sum_probs=27.7
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEecc
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVC 256 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~~ 256 (315)
.++|+|| +.+...+.|+..++++.+. ++.|+|++-.
T Consensus 179 ~~~~ai~--~~~d~~a~g~~~al~~~g~~vP~di~vvg~d~~ 218 (276)
T 2h0a_A 179 SPPLNVF--AGADQVALGVLEEAVRLGLTPGRDVRVLGFDGH 218 (276)
T ss_dssp CSSEEEE--CSSHHHHHHHHHHHHTTSCTTTTSEEEEEESCC
T ss_pred CCCCEEE--ECCcHHHHHHHHHHHHcCCCCCCCeEEEEeCCC
Confidence 4689888 4677889999999998764 4568887654
No 110
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=63.00 E-value=72 Score=27.28 Aligned_cols=55 Identities=13% Similarity=0.042 Sum_probs=33.4
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
..||| |++ |--|.++|..-.+.|.+++++....... .......++..|.++..+.
T Consensus 10 ~vlVT-Gas-~GIG~aia~~la~~G~~V~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 64 (259)
T 3edm_A 10 TIVVA-GAG-RDIGRACAIRFAQEGANVVLTYNGAAEG------AATAVAEIEKLGRSALAIK 64 (259)
T ss_dssp EEEEE-TTT-SHHHHHHHHHHHHTTCEEEEEECSSCHH------HHHHHHHHHTTTSCCEEEE
T ss_pred EEEEE-CCC-chHHHHHHHHHHHCCCEEEEEcCCCHHH------HHHHHHHHHhcCCceEEEE
Confidence 34554 544 6789999999999999987775543311 0112344555676655554
No 111
>3hb7_A Isochorismatase hydrolase; PS structural genomics, midwest center for structural genomics structure initiative; 2.30A {Alkaliphilus metalliredigens}
Probab=62.99 E-value=6.1 Score=33.60 Aligned_cols=61 Identities=15% Similarity=0.099 Sum_probs=41.3
Q ss_pred HHcCCCEEEecCCchhHHH-HHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEE
Q 021235 91 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 155 (315)
Q Consensus 91 ~~~G~~~vVt~g~s~GNhg-~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~ 155 (315)
++.|.++||.+|-. .|.| .++|.-|..+|++++++-+.......+ .+...+..++ .|++|+
T Consensus 116 ~~~gi~~lvi~G~~-T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~--~h~~al~~l~-~~a~v~ 177 (204)
T 3hb7_A 116 KEEGIDTVVLTGVW-TNVCVRSTATDALANAYKVITLSDGTASKTEE--MHEYGLNDLS-IFTKVM 177 (204)
T ss_dssp HHTTCCEEEEEEEC-TTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--HHHHHHHHHH-HHSEEE
T ss_pred HHCCCCEEEEEeec-ccHHHHHHHHHHHHCCCEEEEechhccCCCHH--HHHHHHHHHH-hCCEEe
Confidence 45799999988644 4555 578888999999999998765432110 0123466677 788775
No 112
>1yac_A Ycacgp, YCAC gene product; unknown bacterial hydrolase, three layer alpha-beta-alpha SA topology, ENTB homolog, cshase homolog; 1.80A {Escherichia coli} SCOP: c.33.1.3
Probab=62.64 E-value=5.6 Score=33.96 Aligned_cols=64 Identities=17% Similarity=0.176 Sum_probs=43.7
Q ss_pred HHHcCCCEEEecCCchhHHH-HHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 90 AVAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 90 a~~~G~~~vVt~g~s~GNhg-~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
.++.|.++||.+|- ..|.| .++|.-|..+|++++++-+......++ .+...+..++..|++|+.
T Consensus 100 L~~~gi~~lvi~Gv-~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~--~h~~al~~m~~~g~~v~~ 164 (208)
T 1yac_A 100 VKATGKKQLIIAGV-VTEVCVAFPALSAIEEGFDVFVVTDASGTFNEI--TRHSAWDRMSQAGAQLMT 164 (208)
T ss_dssp HHHTTCSEEEEEEB-SCCCCCHHHHHHHHHTTCEEEEETTSCBCSSHH--HHHHHHHHHHHHTCEEEC
T ss_pred HHhcCCCEEEEEEe-ccchhHHHHHHHHHHCCCEEEEECcccCCCCHH--HHHHHHHHHHHcCCEEee
Confidence 34579999988764 44555 578888999999999887765542110 112346777788988764
No 113
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=62.22 E-value=96 Score=28.50 Aligned_cols=29 Identities=14% Similarity=-0.001 Sum_probs=23.4
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
+|...|. |+.|.++|....+.|++++++-
T Consensus 24 kIgiIGl--G~mG~~~A~~L~~~G~~V~v~d 52 (358)
T 4e21_A 24 QIGMIGL--GRMGADMVRRLRKGGHECVVYD 52 (358)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEECc--hHHHHHHHHHHHhCCCEEEEEe
Confidence 4544564 8999999999999999888773
No 114
>3ot4_A Putative isochorismatase; NICF, maleamate hydrolase, hydrol; 2.40A {Bordetella bronchiseptica} PDB: 3uao_A
Probab=62.20 E-value=9.2 Score=33.44 Aligned_cols=85 Identities=16% Similarity=0.063 Sum_probs=52.2
Q ss_pred CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEecCCchhHHHH-HHHHHHHHcCCeEEEEecCCCcccCCCC
Q 021235 60 NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCR-AAAVAAKYLNLDCYLILRTSKVLVDQDP 138 (315)
Q Consensus 60 g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg~-alA~aa~~lGl~~~ivvp~~~~~~~~~p 138 (315)
+-.++-|.- . ++|..-.+..+| +++|+++||.+|- ..|.|. ++|.-|..+|++++++.+......++
T Consensus 133 ~d~vi~K~~-~-----saF~~t~L~~~L---~~~gi~~lvi~G~-~T~~CV~~Ta~da~~~Gy~V~vv~Da~as~~~~-- 200 (236)
T 3ot4_A 133 GEYVVRKST-P-----SAFYGTMLAAWL---AQRGVQTLLVAGA-TTSGCVRASVVDAMSAGFRPLVLSDCVGDRALG-- 200 (236)
T ss_dssp TCEEEEESS-S-----STTTTSSHHHHH---HHTTCCEEEEEES-CTTTHHHHHHHHHHHHTCEEEEEEEEECCSCHH--
T ss_pred CceEEECCc-c-----CcccCchHHHHH---HHCCCCEEEEeCc-cCcHHHHHHHHHHHHCCCEEEEechhcCCCCHH--
Confidence 446677763 2 333222333333 4579999998864 456665 88999999999999988765432110
Q ss_pred CccchHHHHHhCCCEEEE
Q 021235 139 GLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 139 ~~~~n~~~~r~~GAeV~~ 156 (315)
.....+..++..|++|+.
T Consensus 201 ~h~~aL~~m~~~~a~v~t 218 (236)
T 3ot4_A 201 PHEANLFDMRQKYAAVMT 218 (236)
T ss_dssp HHHHHHHHHHHHTSEEEC
T ss_pred HHHHHHHHHHhcCCEEee
Confidence 012345666667887654
No 115
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=61.51 E-value=19 Score=32.74 Aligned_cols=48 Identities=23% Similarity=0.226 Sum_probs=34.4
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ |.-|++++..|+.+|.+ ++.+..+. .+...++.+||+.++
T Consensus 170 ~~VlV~Ga--G~vG~~a~qla~~~Ga~-Vi~~~~~~----------~~~~~~~~lGa~~~~ 217 (352)
T 1e3j_A 170 TTVLVIGA--GPIGLVSVLAAKAYGAF-VVCTARSP----------RRLEVAKNCGADVTL 217 (352)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCE-EEEEESCH----------HHHHHHHHTTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCE-EEEEcCCH----------HHHHHHHHhCCCEEE
Confidence 45555553 78999999999999999 44443321 357788999997544
No 116
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=61.32 E-value=78 Score=27.09 Aligned_cols=58 Identities=14% Similarity=0.121 Sum_probs=34.7
Q ss_pred CCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcC
Q 021235 94 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 159 (315)
Q Consensus 94 G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~ 159 (315)
|...||| |++ |--|.++|..-.+.|.++++......... ..-...++..|.++..+..
T Consensus 4 ~k~vlVT-Gas-~gIG~aia~~l~~~G~~vv~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~ 61 (258)
T 3oid_A 4 NKCALVT-GSS-RGVGKAAAIRLAENGYNIVINYARSKKAA------LETAEEIEKLGVKVLVVKA 61 (258)
T ss_dssp CCEEEES-SCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHHTTTCCEEEEEC
T ss_pred CCEEEEe-cCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHH------HHHHHHHHhcCCcEEEEEc
Confidence 3334454 544 67899999999999999887643332110 1123445566777766643
No 117
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=61.17 E-value=86 Score=27.56 Aligned_cols=36 Identities=17% Similarity=0.182 Sum_probs=28.8
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEecc
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVC 256 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~~ 256 (315)
.++|+||| .+..++.|+..++++.+. ++.|+|++-.
T Consensus 241 ~~~~ai~~--~nd~~A~g~~~al~~~G~~vP~di~vvg~D~~ 280 (338)
T 3dbi_A 241 AKFSALVA--SNDDMAIGAMKALHERGVAVPEQVSVIGFDDI 280 (338)
T ss_dssp CCCSEEEE--SSHHHHHHHHHHHHHTTCCTTTTCEEEEESCC
T ss_pred CCCeEEEE--CChHHHHHHHHHHHHcCCCCCCCeEEEEECCh
Confidence 46999997 456788899999998873 6789999844
No 118
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=60.98 E-value=87 Score=27.52 Aligned_cols=152 Identities=14% Similarity=0.055 Sum_probs=79.3
Q ss_pred HHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCC--------CCC--ccch--HH-HHHhCCCE
Q 021235 87 MADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQ--------DPG--LIGN--LL-VERLVGAH 153 (315)
Q Consensus 87 l~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~--------~p~--~~~n--~~-~~r~~GAe 153 (315)
+.+..+++++.||- ..++....+++-.+...+++++............ .+. ..+. .. +.+.+|.+
T Consensus 62 ~~~l~~~~v~~iig--~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 139 (356)
T 3ipc_A 62 ANKFVADGVKFVVG--HANSGVSIPASEVYAENGILEITPAATNPVFTERGLWNTFRTCGRDDQQGGIAGKYLADHFKDA 139 (356)
T ss_dssp HHHHHHTTCCEEEE--CSSHHHHHHHHHHHHTTTCEEEESSCCCGGGGSSCCTTEEESSCCHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHCCCcEEEc--CCCcHHHHHHHHHHHhCCCeEEecCCCCcHhhcCCCCcEEEecCChHHHHHHHHHHHHHhcCCC
Confidence 34444578888873 3445677788888999999977643221110000 010 0011 12 33445764
Q ss_pred -EEEEcC-CcccccChHHHHHHHHHHHHHhCCCc---EEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeC
Q 021235 154 -IELISK-EEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVAC 228 (315)
Q Consensus 154 -V~~v~~-~~~~~~~~~~~~~~~~~~l~~~~~~~---y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~v 228 (315)
|.++.. ..|. ....+...+.+++.+... ..++.+..+ +.....+|.+ .++|.||++
T Consensus 140 ~iaii~~~~~~~----~~~~~~~~~~l~~~g~~v~~~~~~~~~~~d------~~~~~~~l~~--------~~~d~v~~~- 200 (356)
T 3ipc_A 140 KVAIIHDKTPYG----QGLADETKKAANAAGVTEVMYEGVNVGDKD------FSALISKMKE--------AGVSIIYWG- 200 (356)
T ss_dssp CEEEEECSSHHH----HHHHHHHHHHHHHTTCCCSEEEECCTTCCC------CHHHHHHHHH--------TTCCEEEEE-
T ss_pred EEEEEeCCChHH----HHHHHHHHHHHHHcCCEEEEEEeeCCCCCC------HHHHHHHHHh--------cCCCEEEEc-
Confidence 544433 2221 123344445555554322 122322211 1122223322 358888865
Q ss_pred CchhhHHHHHHHHhcCCCCCeEEEEeccCCc
Q 021235 229 GSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 259 (315)
Q Consensus 229 GtGGt~aGl~~~~k~~~~~~rVigV~~~g~~ 259 (315)
+.+..+.++...+++.+.++++++.....++
T Consensus 201 ~~~~~a~~~~~~~~~~g~~~~~~~~~~~~~~ 231 (356)
T 3ipc_A 201 GLHTEAGLIIRQAADQGLKAKLVSGDGIVSN 231 (356)
T ss_dssp SCHHHHHHHHHHHHHHTCCCEEEECGGGCSH
T ss_pred cCchHHHHHHHHHHHCCCCCcEEEeccccCH
Confidence 5667788999999998888888876654443
No 119
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=60.91 E-value=13 Score=33.61 Aligned_cols=51 Identities=12% Similarity=0.085 Sum_probs=37.2
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
++|+..|+ +|.-|++++..|+.+|.+.+++.+.. .++..++.+|++.+...
T Consensus 150 ~~vlV~Ga-~g~iG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~ga~~~~~~ 200 (334)
T 3qwb_A 150 DYVLLFAA-AGGVGLILNQLLKMKGAHTIAVASTD-----------EKLKIAKEYGAEYLINA 200 (334)
T ss_dssp CEEEESST-TBHHHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHTTCSEEEET
T ss_pred CEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHcCCcEEEeC
Confidence 45665654 47899999999999999866654421 35778899999866543
No 120
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=60.68 E-value=9.7 Score=34.21 Aligned_cols=48 Identities=19% Similarity=0.124 Sum_probs=35.3
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ .|.-|++++..|+.+|.+.+.+.. . .+...++.+||+.++
T Consensus 154 ~~vlV~Ga-~G~vG~~a~q~a~~~Ga~vi~~~~--~----------~~~~~~~~lGa~~~i 201 (321)
T 3tqh_A 154 DVVLIHAG-AGGVGHLAIQLAKQKGTTVITTAS--K----------RNHAFLKALGAEQCI 201 (321)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHTTCEEEEEEC--H----------HHHHHHHHHTCSEEE
T ss_pred CEEEEEcC-CcHHHHHHHHHHHHcCCEEEEEec--c----------chHHHHHHcCCCEEE
Confidence 56666654 378999999999999998665542 1 247788899998654
No 121
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=60.52 E-value=91 Score=27.65 Aligned_cols=32 Identities=19% Similarity=0.060 Sum_probs=23.5
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
+++..|+ +|--|.++|..-.+.|.+++++-..
T Consensus 48 ~~lVTGa-s~GIG~aia~~la~~G~~Vv~~~~~ 79 (317)
T 3oec_A 48 VAFITGA-ARGQGRTHAVRLAQDGADIVAIDLC 79 (317)
T ss_dssp EEEESSC-SSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred EEEEeCC-CcHHHHHHHHHHHHCCCeEEEEecc
Confidence 3433454 4678999999999999998887543
No 122
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=60.26 E-value=16 Score=33.58 Aligned_cols=49 Identities=12% Similarity=0.127 Sum_probs=36.0
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ |.-|++.+..|+.+|.+-++.+.... .+..+++.+||+.+.
T Consensus 184 ~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~~----------~~~~~a~~lGa~~vi 232 (370)
T 4ej6_A 184 STVAILGG--GVIGLLTVQLARLAGATTVILSTRQA----------TKRRLAEEVGATATV 232 (370)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCSEEEEECSCH----------HHHHHHHHHTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCCH----------HHHHHHHHcCCCEEE
Confidence 55655664 78999999999999996555554332 368888999998655
No 123
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=59.93 E-value=79 Score=26.76 Aligned_cols=37 Identities=8% Similarity=-0.065 Sum_probs=28.8
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEeccC
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVCD 257 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~~g 257 (315)
.++|+||| .+..++.|+..++++.+. ++.|+|++-..
T Consensus 180 ~~~~ai~~--~~d~~a~g~~~al~~~g~~vP~di~vig~d~~~ 220 (276)
T 3jy6_A 180 DQKTVAFA--LKERWLLEFFPNLIISGLIDNQTVTATGFADTD 220 (276)
T ss_dssp SSCEEEEE--SSHHHHHHHSHHHHHSSSCCSSSEEEEEBCCCS
T ss_pred CCCcEEEE--eCcHHHHHHHHHHHHcCCCCCCcEEEEEECChH
Confidence 57899987 567888899999998873 56788887543
No 124
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=59.88 E-value=81 Score=26.86 Aligned_cols=157 Identities=13% Similarity=0.047 Sum_probs=75.4
Q ss_pred HHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCC---CCc--cch---HHHHHhCC--CEEE
Q 021235 86 LMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQD---PGL--IGN---LLVERLVG--AHIE 155 (315)
Q Consensus 86 ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~---p~~--~~n---~~~~r~~G--AeV~ 155 (315)
.+.....++++.||.... ..+........++..|++++++-.......... .+. .+. ..+.+.+| .+|.
T Consensus 49 ~i~~l~~~~vdgiIi~~~-~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~~gg~~~I~ 127 (283)
T 2ioy_A 49 NVEDLIQQKVDVLLINPV-DSDAVVTAIKEANSKNIPVITIDRSANGGDVVCHIASDNVKGGEMAAEFIAKALKGKGNVV 127 (283)
T ss_dssp HHHHHHHTTCSEEEECCS-STTTTHHHHHHHHHTTCCEEEESSCCSSSCCSEEEEECHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHcCCCEEEEeCC-chhhhHHHHHHHHHCCCeEEEecCCCCCcceeEEEecChHHHHHHHHHHHHHHcCCCceEE
Confidence 355566788999886542 222222233446678999877643211000000 000 011 12334435 3566
Q ss_pred EEcCCcccccChHHHHHHHHHHHHHhCCCcEEeC--CCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhh
Q 021235 156 LISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIP--VGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGT 233 (315)
Q Consensus 156 ~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip--~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt 233 (315)
++....... ...++.+-..+.+++. +..-+.. .+..+. ..|+ ....++.++- .++|+|||. +..+
T Consensus 128 ~i~g~~~~~-~~~~R~~Gf~~al~~~-~~~~~~~~~~~~~~~--~~~~-~~~~~ll~~~------~~~~ai~~~--nD~~ 194 (283)
T 2ioy_A 128 ELEGIPGAS-AARDRGKGFDEAIAKY-PDIKIVAKQAADFDR--SKGL-SVMENILQAQ------PKIDAVFAQ--NDEM 194 (283)
T ss_dssp EEECCTTCH-HHHHHHHHHHHHHTTC-TTEEEEEEEECTTCH--HHHH-HHHHHHHHHC------SCCCEEEES--SHHH
T ss_pred EEECCCCCc-cHHHHHHHHHHHHHhC-CCCEEEeeccCCCCH--HHHH-HHHHHHHHhC------CCccEEEEC--CchH
Confidence 665321100 1112333334444432 1211111 111112 2233 2344554431 368998875 4567
Q ss_pred HHHHHHHHhcCCC-CCeEEEEecc
Q 021235 234 IAGLSLGSWLGTL-KAKVHAFSVC 256 (315)
Q Consensus 234 ~aGl~~~~k~~~~-~~rVigV~~~ 256 (315)
+.|+..++++.+. ++.|+|++-.
T Consensus 195 A~g~~~al~~~G~~di~viG~D~~ 218 (283)
T 2ioy_A 195 ALGAIKAIEAANRQGIIVVGFDGT 218 (283)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEECC
T ss_pred HHHHHHHHHHCCCCCcEEEEeCCC
Confidence 8899999998775 8899999853
No 125
>1j2r_A Hypothetical isochorismatase family protein YECD; parallel beta-sheet 3-2-1-4-5-6, alpha-beta-alpha motif, TET structural genomics; 1.30A {Escherichia coli} SCOP: c.33.1.3
Probab=59.73 E-value=6.5 Score=33.06 Aligned_cols=63 Identities=19% Similarity=0.161 Sum_probs=40.8
Q ss_pred CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEecCCchhHHH-HHHHHHHHHcCCeEEEEecCCCc
Q 021235 60 NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKV 132 (315)
Q Consensus 60 g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg-~alA~aa~~lGl~~~ivvp~~~~ 132 (315)
+-.++-|.- . ++|..-.+..+| +++|+++||.+|- ..|.| .++|.-|..+|++++++-+....
T Consensus 106 ~~~vi~K~~-~-----saF~~t~L~~~L---~~~gi~~lvi~G~-~T~~CV~~Ta~da~~~Gy~v~vv~Da~as 169 (199)
T 1j2r_A 106 SDIEIIKRQ-W-----GAFYGTDLELQL---RRRGIDTIVLCGI-STNIGVESTARNAWELGFNLVIAEDACSA 169 (199)
T ss_dssp TSEEEEESS-S-----SSSTTSSHHHHH---HHTTCCEEEEEEE-CTTTHHHHHHHHHHHTTCEEEEEEEEEEB
T ss_pred CCEEEeCCC-c-----CCcCCCCHHHHH---HHCCCCEEEEEee-eccHHHHHHHHHHHHCCCEEEEehhhcCC
Confidence 335677763 2 333222333333 4579999998764 45555 47888899999999998876543
No 126
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=59.52 E-value=17 Score=32.64 Aligned_cols=48 Identities=13% Similarity=0.017 Sum_probs=34.7
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
+|+..|+ +|.-|++++..|+.+|.+.+++.+.. .+...++.+||+.+.
T Consensus 152 ~VlV~Ga-~G~vG~~~~q~a~~~Ga~vi~~~~~~-----------~~~~~~~~lGa~~~i 199 (328)
T 1xa0_A 152 PVLVTGA-TGGVGSLAVSMLAKRGYTVEASTGKA-----------AEHDYLRVLGAKEVL 199 (328)
T ss_dssp CEEESST-TSHHHHHHHHHHHHTTCCEEEEESCT-----------TCHHHHHHTTCSEEE
T ss_pred eEEEecC-CCHHHHHHHHHHHHCCCEEEEEECCH-----------HHHHHHHHcCCcEEE
Confidence 4655554 47899999999999999866555432 146778889997654
No 127
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=59.44 E-value=19 Score=32.83 Aligned_cols=49 Identities=16% Similarity=0.183 Sum_probs=34.2
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ |.-|++++..|+.+|.+-++.+.... .+..+++.+||+.++
T Consensus 173 ~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~~----------~~~~~a~~lGa~~vi 221 (356)
T 1pl8_A 173 HKVLVCGA--GPIGMVTLLVAKAMGAAQVVVTDLSA----------TRLSKAKEIGADLVL 221 (356)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCSEEEEEESCH----------HHHHHHHHTTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCCH----------HHHHHHHHhCCCEEE
Confidence 45655663 78999999999999994444443321 357888999997544
No 128
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=59.35 E-value=9.7 Score=34.04 Aligned_cols=64 Identities=11% Similarity=0.129 Sum_probs=43.0
Q ss_pred HHcCCCEEEecCCchhHH-HHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEE
Q 021235 91 VAQGADCIITIGGIQSNH-CRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 157 (315)
Q Consensus 91 ~~~G~~~vVt~g~s~GNh-g~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v 157 (315)
++.|.++||.+|- ..|. ..++|.-|..+|++++++.+.......+ .+...+..++..|++|+-.
T Consensus 141 ~~~gi~~lvi~Gv-~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~--~h~~al~~m~~~~~~v~~t 205 (287)
T 2fq1_A 141 KESGRNQLIITGV-YAHIGCMTTATDAFMRDIKPFMVADALADFSRD--EHLMSLKYVAGRSGRVVMT 205 (287)
T ss_dssp HHTTCCEEEEEEE-CTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--HHHHHHHHHHHHTCEEECH
T ss_pred HHCCCCEEEEEEe-CcchHHHHHHHHHHHCCCEEEEechhccCCCHH--HHHHHHHHHHHhCcEEeeH
Confidence 4579999998764 4554 4578888999999999998765432110 1123356667778887644
No 129
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=59.21 E-value=9.9 Score=34.60 Aligned_cols=49 Identities=20% Similarity=0.185 Sum_probs=35.2
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..||+ |.-|++++..|+.+|.+.+++.+. ..+.+.++.+||+.+.
T Consensus 152 ~~VlV~gg~-G~vG~~a~qla~~~Ga~Vi~~~~~-----------~~~~~~~~~lGa~~vi 200 (346)
T 3fbg_A 152 KTLLIINGA-GGVGSIATQIAKAYGLRVITTASR-----------NETIEWTKKMGADIVL 200 (346)
T ss_dssp CEEEEESTT-SHHHHHHHHHHHHTTCEEEEECCS-----------HHHHHHHHHHTCSEEE
T ss_pred CEEEEEcCC-CHHHHHHHHHHHHcCCEEEEEeCC-----------HHHHHHHHhcCCcEEE
Confidence 455555443 789999999999999975555332 1368888899998665
No 130
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=59.07 E-value=15 Score=33.52 Aligned_cols=48 Identities=13% Similarity=0.088 Sum_probs=34.6
Q ss_pred CEEEecCCchhHHHHHHHHHHHHc-CCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYL-NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~l-Gl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ |--|+.++..|+.+ |.+.+++.+. . .+...++.+||+.++
T Consensus 188 ~~VlV~Ga--G~vG~~avqlak~~~Ga~Vi~~~~~-~----------~~~~~~~~lGa~~vi 236 (359)
T 1h2b_A 188 AYVAIVGV--GGLGHIAVQLLKVMTPATVIALDVK-E----------EKLKLAERLGADHVV 236 (359)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHCCCEEEEEESS-H----------HHHHHHHHTTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCeEEEEeCC-H----------HHHHHHHHhCCCEEE
Confidence 56666665 67999999999999 9975444322 1 367888999997654
No 131
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=58.97 E-value=95 Score=27.34 Aligned_cols=35 Identities=11% Similarity=0.065 Sum_probs=26.9
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEec
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSV 255 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~ 255 (315)
.+||+||| .+...+.|+..++++.+. ++.|+|++-
T Consensus 238 ~~~~ai~~--~nD~~A~g~~~al~~~G~~vP~disvvgfD~ 276 (339)
T 3h5o_A 238 PDCDALFC--CNDDLAIGALARSQQLGIAVPERLAIAGFND 276 (339)
T ss_dssp TTCCEEEE--SSHHHHHHHHHHHHHTTCCTTTTCEEECSBC
T ss_pred CCCcEEEE--CChHHHHHHHHHHHHcCCCCCCCEEEEEECC
Confidence 36899987 456788899999998763 577888764
No 132
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=58.61 E-value=23 Score=29.88 Aligned_cols=58 Identities=12% Similarity=0.130 Sum_probs=41.7
Q ss_pred HHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHHHHHHHHh
Q 021235 206 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLD 271 (315)
Q Consensus 206 ~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~~i~~l~~ 271 (315)
.|+.++..+ ..++.|++.+|..+.+.|+..++ ....||||.+..........+..+++
T Consensus 67 ~~~~~~a~~----~g~~ViIa~AG~aahLpGvvAa~----T~~PVIGVPv~s~~l~G~DsLlSivQ 124 (181)
T 4b4k_A 67 FEYAETARE----RGLKVIIAGAGGAAHLPGMVAAK----TNLPVIGVPVQSKALNGLDSLLSIVQ 124 (181)
T ss_dssp HHHHHHTTT----TTCCEEEEEECSSCCHHHHHHTT----CCSCEEEEECCCTTTTTHHHHHHHHT
T ss_pred HHHHHHHHh----cCceEEEEeccccccchhhHHhc----CCCCEEEEecCCCCccchhhHHHHHh
Confidence 455555432 35899999999999999999885 35799999997765445554555543
No 133
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=58.54 E-value=17 Score=32.24 Aligned_cols=49 Identities=14% Similarity=0.130 Sum_probs=34.5
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ +|.-|++++..|+.+|.+.+++.+.. .+...++.+|++.+.
T Consensus 127 ~~vlV~Ga-~G~vG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~ga~~~~ 175 (302)
T 1iz0_A 127 EKVLVQAA-AGALGTAAVQVARAMGLRVLAAASRP-----------EKLALPLALGAEEAA 175 (302)
T ss_dssp CEEEESST-TBHHHHHHHHHHHHTTCEEEEEESSG-----------GGSHHHHHTTCSEEE
T ss_pred CEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHhcCCCEEE
Confidence 45665554 47899999999999999766654422 245667889997543
No 134
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=58.45 E-value=87 Score=26.74 Aligned_cols=55 Identities=15% Similarity=0.038 Sum_probs=34.0
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
+++..|+ +|--|.++|....+.|.++++........ .......++..|.++..+.
T Consensus 28 ~vlVTGa-s~gIG~~la~~l~~~G~~v~i~~~r~~~~------~~~~~~~l~~~~~~~~~~~ 82 (267)
T 4iiu_A 28 SVLVTGA-SKGIGRAIARQLAADGFNIGVHYHRDAAG------AQETLNAIVANGGNGRLLS 82 (267)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHH------HHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCchHH------HHHHHHHHHhcCCceEEEE
Confidence 3444454 46789999999999999987766443211 0122444555666666554
No 135
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=58.30 E-value=11 Score=35.76 Aligned_cols=50 Identities=14% Similarity=0.047 Sum_probs=38.0
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 157 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v 157 (315)
++|+..|+ +|--|.+.+..|+.+|.+.+++... ..++..++.+||+.++-
T Consensus 230 ~~VlV~Ga-sG~vG~~avqlak~~Ga~vi~~~~~-----------~~~~~~~~~lGa~~vi~ 279 (456)
T 3krt_A 230 DNVLIWGA-SGGLGSYATQFALAGGANPICVVSS-----------PQKAEICRAMGAEAIID 279 (456)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESS-----------HHHHHHHHHHTCCEEEE
T ss_pred CEEEEECC-CCHHHHHHHHHHHHcCCeEEEEECC-----------HHHHHHHHhhCCcEEEe
Confidence 56666654 4789999999999999988777642 13688889999986654
No 136
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=58.23 E-value=93 Score=27.00 Aligned_cols=54 Identities=17% Similarity=0.059 Sum_probs=32.1
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
.||| |++ |--|.++|..-.+.|.+++++....... .......++..|.++..+.
T Consensus 32 ~lVT-Gas-~GIG~aia~~la~~G~~V~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 85 (280)
T 4da9_A 32 AIVT-GGR-RGIGLGIARALAASGFDIAITGIGDAEG------VAPVIAELSGLGARVIFLR 85 (280)
T ss_dssp EEEE-TTT-SHHHHHHHHHHHHTTCEEEEEESCCHHH------HHHHHHHHHHTTCCEEEEE
T ss_pred EEEe-cCC-CHHHHHHHHHHHHCCCeEEEEeCCCHHH------HHHHHHHHHhcCCcEEEEE
Confidence 3454 543 6788999998889999887775432210 0112334455666665554
No 137
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=58.13 E-value=18 Score=33.65 Aligned_cols=48 Identities=19% Similarity=0.208 Sum_probs=33.3
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 155 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~ 155 (315)
++|+..| + |--|...+..|+.+|..-++.+..+. .++.+++.+||+++
T Consensus 187 ~~VlV~G-a-G~vG~~aiqlak~~Ga~~Vi~~~~~~----------~~~~~a~~lGa~~i 234 (398)
T 2dph_A 187 SHVYIAG-A-GPVGRCAAAGARLLGAACVIVGDQNP----------ERLKLLSDAGFETI 234 (398)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHHTCSEEEEEESCH----------HHHHHHHTTTCEEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHcCCCEEEEEcCCH----------HHHHHHHHcCCcEE
Confidence 4566566 3 78899999999999994344433221 35788899999743
No 138
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=58.13 E-value=99 Score=27.28 Aligned_cols=157 Identities=15% Similarity=0.068 Sum_probs=76.0
Q ss_pred HHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcc----cCCCCCccch--HHHHHhCCC-EEEEEc
Q 021235 86 LMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL----VDQDPGLIGN--LLVERLVGA-HIELIS 158 (315)
Q Consensus 86 ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~----~~~~p~~~~n--~~~~r~~GA-eV~~v~ 158 (315)
++.....++++.||..+... +. .....++..|++++++-+..... ...+....+. ...+...|. ++.++.
T Consensus 116 ~i~~l~~~~vdGiIi~~~~~-~~--~~~~~l~~~~iPvV~i~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~ 192 (344)
T 3kjx_A 116 VLYEMLSWRPSGVIIAGLEH-SE--AARAMLDAAGIPVVEIMDSDGKPVDAMVGISHRRAGREMAQAILKAGYRRIGFMG 192 (344)
T ss_dssp HHHHHHTTCCSEEEEECSCC-CH--HHHHHHHHCSSCEEEEEECSSCCSSEEEEECHHHHHHHHHHHHHHHTCCSCCEEE
T ss_pred HHHHHHhCCCCEEEEECCCC-CH--HHHHHHHhCCCCEEEEeCCCCCCCCCEEEECcHHHHHHHHHHHHHCCCCeEEEEe
Confidence 35556677888888764322 22 33445667899988874322110 0000000011 112223354 344443
Q ss_pred CCcccccChHHHHHHHHHHHHHhCCC--cEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHH
Q 021235 159 KEEYSKIGSVTLTNILKEKLLKEGRR--PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAG 236 (315)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~l~~~~~~--~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aG 236 (315)
..........++++-..+.+++.+.. ...+..+..+. ..|| ....+++++- .++|+|||. +..++.|
T Consensus 193 ~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~--~~~~-~~~~~ll~~~------~~~~ai~~~--nd~~A~g 261 (344)
T 3kjx_A 193 TKMPLDYRARKRFEGFTEVLGKNGVEIEDREFYSGGSAL--AKGR-EMTQAMLERS------PDLDFLYYS--NDMIAAG 261 (344)
T ss_dssp SSTTTCHHHHHHHHHHHHHHHHTTCCCSCEEECSSCCCH--HHHH-HHHHHHHHHS------TTCCEEEES--SHHHHHH
T ss_pred cCcccCccHHHHHHHHHHHHHHcCCCCChheEEeCCCCH--HHHH-HHHHHHHhcC------CCCCEEEEC--CHHHHHH
Confidence 32100001122334444455554421 12222222222 2333 2444554432 368999954 5678899
Q ss_pred HHHHHhcCCC----CCeEEEEecc
Q 021235 237 LSLGSWLGTL----KAKVHAFSVC 256 (315)
Q Consensus 237 l~~~~k~~~~----~~rVigV~~~ 256 (315)
+..++++.+. ++.|+|++-.
T Consensus 262 ~~~al~~~g~~vP~disvvg~D~~ 285 (344)
T 3kjx_A 262 GLLYLLEQGIDIPGQIGLAGFNNV 285 (344)
T ss_dssp HHHHHHHTTCCTTTTCEEECSBCC
T ss_pred HHHHHHHcCCCCCCceEEEEECCh
Confidence 9999998763 5678887643
No 139
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=57.81 E-value=18 Score=33.25 Aligned_cols=48 Identities=8% Similarity=0.027 Sum_probs=33.8
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ |.-|++++..|+.+|.+.+++.... .+...++.+||+.++
T Consensus 196 ~~VlV~Ga--G~vG~~aiqlak~~Ga~Vi~~~~~~-----------~~~~~a~~lGa~~vi 243 (369)
T 1uuf_A 196 KKVGVVGI--GGLGHMGIKLAHAMGAHVVAFTTSE-----------AKREAAKALGADEVV 243 (369)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESSG-----------GGHHHHHHHTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHcCCcEEe
Confidence 45655664 5699999999999999844443321 257778889997654
No 140
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=57.80 E-value=16 Score=28.99 Aligned_cols=31 Identities=13% Similarity=0.064 Sum_probs=25.1
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
++|+.+|+ |..|..+|...+..|.+++++-+
T Consensus 20 ~~v~IiG~--G~iG~~la~~L~~~g~~V~vid~ 50 (155)
T 2g1u_A 20 KYIVIFGC--GRLGSLIANLASSSGHSVVVVDK 50 (155)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEECC--CHHHHHHHHHHHhCCCeEEEEEC
Confidence 56666675 89999999999999998777644
No 141
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=57.33 E-value=57 Score=27.73 Aligned_cols=33 Identities=15% Similarity=0.043 Sum_probs=24.0
Q ss_pred EEEecCCc-hhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 97 CIITIGGI-QSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 97 ~vVt~g~s-~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
+++..|++ ++.-|.++|....+.|.+++++.+.
T Consensus 16 ~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~ 49 (271)
T 3ek2_A 16 RILLTGLLSNRSIAYGIAKACKREGAELAFTYVG 49 (271)
T ss_dssp EEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecc
Confidence 44444553 3678999999999999988777654
No 142
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=57.25 E-value=62 Score=27.77 Aligned_cols=31 Identities=19% Similarity=0.040 Sum_probs=22.5
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
..||| |++ +--|.++|..-.+.|.+++++-+
T Consensus 13 ~vlVT-Gas-~gIG~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 13 VVVIS-GVG-PALGTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp EEEEE-SCC-TTHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CCC-cHHHHHHHHHHHHCcCEEEEEeC
Confidence 34554 544 67899999999999998776644
No 143
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=57.22 E-value=17 Score=32.84 Aligned_cols=48 Identities=17% Similarity=0.143 Sum_probs=33.7
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ |.-|++++..|+.+|.+.+++.+. ..+.+.++.+|++.+.
T Consensus 166 ~~VlV~Ga--G~vG~~~~~~a~~~Ga~Vi~~~~~-----------~~~~~~~~~lGa~~~~ 213 (339)
T 1rjw_A 166 EWVAIYGI--GGLGHVAVQYAKAMGLNVVAVDIG-----------DEKLELAKELGADLVV 213 (339)
T ss_dssp CEEEEECC--STTHHHHHHHHHHTTCEEEEECSC-----------HHHHHHHHHTTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCEEEEEeCC-----------HHHHHHHHHCCCCEEe
Confidence 45655665 449999999999999965554332 1357778889997543
No 144
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=57.04 E-value=96 Score=26.78 Aligned_cols=33 Identities=18% Similarity=0.054 Sum_probs=23.0
Q ss_pred EEEecCCchhH--HHHHHHHHHHHcCCeEEEEecCC
Q 021235 97 CIITIGGIQSN--HCRAAAVAAKYLNLDCYLILRTS 130 (315)
Q Consensus 97 ~vVt~g~s~GN--hg~alA~aa~~lGl~~~ivvp~~ 130 (315)
+++..|++ |+ -|.++|..-.+.|.+++++.+..
T Consensus 28 ~vlVTGas-g~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 28 KILITGLL-SNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp EEEECCCC-STTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred EEEEECCC-CCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 34334543 45 89999999999999877765543
No 145
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=57.03 E-value=13 Score=35.15 Aligned_cols=49 Identities=12% Similarity=0.049 Sum_probs=37.1
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ +|.-|++++..|+.+|.+.+++... ..++..++.+||+.+.
T Consensus 222 ~~VlV~Ga-sG~iG~~a~qla~~~Ga~vi~~~~~-----------~~~~~~~~~lGa~~~i 270 (447)
T 4a0s_A 222 DIVLIWGA-SGGLGSYAIQFVKNGGGIPVAVVSS-----------AQKEAAVRALGCDLVI 270 (447)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESS-----------HHHHHHHHHTTCCCEE
T ss_pred CEEEEECC-CCHHHHHHHHHHHHcCCEEEEEeCC-----------HHHHHHHHhcCCCEEE
Confidence 56665654 4789999999999999988777642 1367888999998654
No 146
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=56.91 E-value=86 Score=26.23 Aligned_cols=72 Identities=11% Similarity=0.023 Sum_probs=44.5
Q ss_pred CCCeEEEeCCchhhHHHHHHHHhcCC---CCCeEEEEeccCCchhhHHHHHHHHhhhcCCCCCCCeEEecCCcccchHHH
Q 021235 220 KFDDIVVACGSGGTIAGLSLGSWLGT---LKAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVDSRDIVNIQNVSVYMTFKN 296 (315)
Q Consensus 220 ~~D~ivv~vGtGGt~aGl~~~~k~~~---~~~rVigV~~~g~~~~~~~~i~~l~~g~~~~~~~~dvv~v~e~~~~~~~~~ 296 (315)
++|+||+. +...+.|+..++++.+ .++.|+|++-.....+. .+.+ --|..+-.+......+
T Consensus 180 ~~~ai~~~--~d~~a~g~~~al~~~g~vp~di~vvg~d~~~~~~~~-------~p~l-------ttv~~~~~~~g~~a~~ 243 (272)
T 3o74_A 180 LPDALVTT--SYVLLQGVFDTLQARPVDSRQLQLGTFGDNQLLDFL-------PLPV-------NAMAQQHGQIAATALE 243 (272)
T ss_dssp CCSEEEES--SHHHHHHHHHHHHTSCGGGCCCEEEEESCCGGGGTS-------SSCE-------EEEECCHHHHHHHHHH
T ss_pred CCcEEEEe--CchHHHHHHHHHHHcCCCccceEEEEeCChHHHHhc-------CCCc-------eEEEeCHHHHHHHHHH
Confidence 58999884 6678899999999987 47889998754311111 0000 0233333355556667
Q ss_pred HHHHHHhcCCC
Q 021235 297 ILMNILMNGKQ 307 (315)
Q Consensus 297 ~~~~~~~~~~~ 307 (315)
+|.+.+-+|+.
T Consensus 244 ~l~~~i~~~~~ 254 (272)
T 3o74_A 244 LALAAIEEKRY 254 (272)
T ss_dssp HHHHHHHHCCC
T ss_pred HHHHHHhCCCC
Confidence 77777666654
No 147
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=56.63 E-value=15 Score=32.98 Aligned_cols=49 Identities=10% Similarity=0.026 Sum_probs=35.3
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHH-HhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVE-RLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~-r~~GAeV~~ 156 (315)
++|+..|+ +|.-|++++..|+.+|.+.+++.+.. .+...+ +.+|++.+.
T Consensus 151 ~~vlI~Ga-~g~iG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~~g~~~~~ 200 (336)
T 4b7c_A 151 ETVVISGA-AGAVGSVAGQIARLKGCRVVGIAGGA-----------EKCRFLVEELGFDGAI 200 (336)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHTTCCSEEE
T ss_pred CEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHHcCCCEEE
Confidence 55655554 47899999999999999776664332 256677 899997654
No 148
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=56.57 E-value=1e+02 Score=26.90 Aligned_cols=55 Identities=15% Similarity=-0.023 Sum_probs=34.2
Q ss_pred CCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 94 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 94 G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
|...||| ||+ +--|+++|..-++.|.+++++-+.... ......++..|.++..+.
T Consensus 7 gKvalVT-Gas-~GIG~aia~~la~~Ga~Vv~~~r~~~~--------~~~~~~~~~~~~~~~~~~ 61 (258)
T 4gkb_A 7 DKVVIVT-GGA-SGIGGAISMRLAEERAIPVVFARHAPD--------GAFLDALAQRQPRATYLP 61 (258)
T ss_dssp TCEEEEE-TTT-SHHHHHHHHHHHHTTCEEEEEESSCCC--------HHHHHHHHHHCTTCEEEE
T ss_pred CCEEEEe-CCC-CHHHHHHHHHHHHcCCEEEEEECCccc--------HHHHHHHHhcCCCEEEEE
Confidence 3334555 544 578999999999999988877654321 123444555666655554
No 149
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=56.34 E-value=36 Score=30.86 Aligned_cols=50 Identities=10% Similarity=0.060 Sum_probs=34.2
Q ss_pred CEEEecCCchhHHHHHH-HHHH-HHcCCe-EEEEecCCCcccCCCCCccchHHHHHhCCCEEE
Q 021235 96 DCIITIGGIQSNHCRAA-AVAA-KYLNLD-CYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 155 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~al-A~aa-~~lGl~-~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~ 155 (315)
++|+..|+ |--|... +..| +.+|.+ .+.+.+.... ..+...++.+||+.+
T Consensus 174 ~~VlV~Ga--G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~--------~~~~~~~~~lGa~~v 226 (357)
T 2b5w_A 174 SSAFVLGN--GSLGLLTLAMLKVDDKGYENLYCLGRRDRP--------DPTIDIIEELDATYV 226 (357)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHCTTCCCEEEEEECCCSS--------CHHHHHHHHTTCEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHHHcCCcEEEEEeCCccc--------HHHHHHHHHcCCccc
Confidence 55665665 6789888 9999 999998 5554432210 015778899999866
No 150
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=56.01 E-value=1e+02 Score=26.86 Aligned_cols=56 Identities=18% Similarity=0.089 Sum_probs=35.0
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcC
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 159 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~ 159 (315)
..||| |++ |--|.++|..-.+.|.+++++.+...... .......+..|.+++.+..
T Consensus 49 ~vlVT-Gas-~GIG~aia~~la~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~~~~~ 104 (291)
T 3ijr_A 49 NVLIT-GGD-SGIGRAVSIAFAKEGANIAIAYLDEEGDA------NETKQYVEKEGVKCVLLPG 104 (291)
T ss_dssp EEEEE-TTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHHTTTCCEEEEES
T ss_pred EEEEe-CCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHH------HHHHHHHHhcCCcEEEEEC
Confidence 34555 543 67899999999999999877765432110 1123345667777766653
No 151
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=55.99 E-value=12 Score=33.57 Aligned_cols=50 Identities=14% Similarity=0.034 Sum_probs=36.3
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 157 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v 157 (315)
++|+..|+ +|.-|++++..|+.+|.+.+++.+.. .+.+.++.+|++.+..
T Consensus 142 ~~VlV~Ga-~g~iG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~Ga~~~~~ 191 (325)
T 3jyn_A 142 EIILFHAA-AGGVGSLACQWAKALGAKLIGTVSSP-----------EKAAHAKALGAWETID 191 (325)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHHTCEEEEEESSH-----------HHHHHHHHHTCSEEEE
T ss_pred CEEEEEcC-CcHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHcCCCEEEe
Confidence 45665553 47899999999999999866665321 3577888899976553
No 152
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=55.97 E-value=58 Score=30.61 Aligned_cols=92 Identities=12% Similarity=0.165 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCcccccChHHHHHHHHHHHHHhCCCc--EEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCC--eEE
Q 021235 150 VGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRP--YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFD--DIV 225 (315)
Q Consensus 150 ~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~--y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D--~iv 225 (315)
.|-++.+|.+.... ..+.+++.+.+.+.+-.. +.+|.+-.|+.- ....++++++.+ ..+| .++
T Consensus 61 ~~~rvlIVtd~~v~----~~~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~-----~~v~~~~~~l~~----~~~~R~d~I 127 (390)
T 3okf_A 61 AKQKVVIVTNHTVA----PLYAPAIISLLDHIGCQHALLELPDGEQYKTL-----ETFNTVMSFLLE----HNYSRDVVV 127 (390)
T ss_dssp TTCEEEEEEETTTH----HHHHHHHHHHHHHHTCEEEEEEECSSGGGCBH-----HHHHHHHHHHHH----TTCCTTCEE
T ss_pred CCCEEEEEECCcHH----HHHHHHHHHHHHHcCCeEEEEEECCCcCCchH-----HHHHHHHHHHHh----cCCCcCcEE
Confidence 35566666543221 124455666676655333 345665444431 234566666543 2343 789
Q ss_pred EeCCchhhH--HHHHHHHhcCCCCCeEEEEecc
Q 021235 226 VACGSGGTI--AGLSLGSWLGTLKAKVHAFSVC 256 (315)
Q Consensus 226 v~vGtGGt~--aGl~~~~k~~~~~~rVigV~~~ 256 (315)
+++|+|... +|.+.+.. ...++++.|.+.
T Consensus 128 IAvGGGsv~D~ak~~Aa~~--~rgip~I~IPTT 158 (390)
T 3okf_A 128 IALGGGVIGDLVGFAAACY--QRGVDFIQIPTT 158 (390)
T ss_dssp EEEESHHHHHHHHHHHHHB--TTCCEEEEEECS
T ss_pred EEECCcHHhhHHHHHHHHh--cCCCCEEEeCCC
Confidence 999998765 55554433 356788888775
No 153
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=55.96 E-value=65 Score=27.92 Aligned_cols=54 Identities=15% Similarity=0.074 Sum_probs=30.6
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
+++..|+ +|--|.++|..-.+.|.+++++-+.... .......++..|.++..+.
T Consensus 28 ~~lVTGa-s~gIG~aia~~la~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~ 81 (271)
T 4ibo_A 28 TALVTGS-SRGLGRAMAEGLAVAGARILINGTDPSR-------VAQTVQEFRNVGHDAEAVA 81 (271)
T ss_dssp EEEETTC-SSHHHHHHHHHHHHTTCEEEECCSCHHH-------HHHHHHHHHHTTCCEEECC
T ss_pred EEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCceEEEE
Confidence 3443454 4678899998888899876654322110 0112334455666666554
No 154
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=55.94 E-value=25 Score=29.42 Aligned_cols=57 Identities=11% Similarity=0.130 Sum_probs=40.9
Q ss_pred HHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHHHHHHHH
Q 021235 206 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLL 270 (315)
Q Consensus 206 ~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~~i~~l~ 270 (315)
.|+.++..+ ..++.|++..|.-+.+.|+..++- ...||||.+.............++
T Consensus 57 ~~~~~~a~~----~g~~ViIa~AG~aahLpgvvA~~t----~~PVIgVPv~~~~l~G~dsLlSiv 113 (173)
T 4grd_A 57 FDYAEKARE----RGLRAIIAGAGGAAHLPGMLAAKT----TVPVLGVPVASKYLKGVDSLHSIV 113 (173)
T ss_dssp HHHHHHHTT----TTCSEEEEEEESSCCHHHHHHHHC----CSCEEEEEECCTTTTTHHHHHHHH
T ss_pred HHHHHHHHh----cCCeEEEEeccccccchhhheecC----CCCEEEEEcCCCCCCchhHHHHHH
Confidence 355555542 358899999999999999999874 579999998766544444444444
No 155
>1x9g_A Putative MAR1; structural genomics, protein structure initiative, SGPP, PSI structural genomics of pathogenic protozoa consortium; 2.41A {Leishmania donovani} SCOP: c.33.1.3 PDB: 1xn4_A
Probab=55.93 E-value=6.7 Score=33.39 Aligned_cols=59 Identities=10% Similarity=0.058 Sum_probs=40.0
Q ss_pred CCCEEEecCCchhHHH-HHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHH--hCCCEEE
Q 021235 94 GADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVER--LVGAHIE 155 (315)
Q Consensus 94 G~~~vVt~g~s~GNhg-~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r--~~GAeV~ 155 (315)
|.++||.+|-. .|.| .++|.-|..+|++++++-+.......+ .....+..++ ..|++|+
T Consensus 106 gi~~lvi~Gv~-T~~CV~~Ta~dA~~~Gy~V~Vv~Da~as~~~~--~h~~aL~~m~~~~~g~~v~ 167 (200)
T 1x9g_A 106 DVDNAVVFGIE-GHACILQTVADLLDMNKRVFLPKDGLGSQKKT--DFKAAIKLMSSWGPNCEIT 167 (200)
T ss_dssp TCCEEEEEEEC-TTTHHHHHHHHHHHTTCEEEEEGGGEECSSHH--HHHHHHHHHHTSCSSEEEE
T ss_pred CCCEEEEEEEe-cCcHHHHHHHHHHhCCCEEEEeCCCcCCCCHH--HHHHHHHHHHhhCCCeEEe
Confidence 99999987644 5555 578889999999999887765432110 1123356777 7788765
No 156
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=55.75 E-value=27 Score=31.55 Aligned_cols=49 Identities=16% Similarity=0.107 Sum_probs=34.3
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ +|.-|++++..++.+|.+.+++.+.. .+...++.+|++.+.
T Consensus 171 ~~vlV~Ga-~ggiG~~~~~~a~~~Ga~V~~~~~~~-----------~~~~~~~~~g~~~~~ 219 (347)
T 2hcy_A 171 HWVAISGA-AGGLGSLAVQYAKAMGYRVLGIDGGE-----------GKEELFRSIGGEVFI 219 (347)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEECST-----------THHHHHHHTTCCEEE
T ss_pred CEEEEECC-CchHHHHHHHHHHHCCCcEEEEcCCH-----------HHHHHHHHcCCceEE
Confidence 45555554 47899999999999999766654332 146677889987543
No 157
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=55.46 E-value=65 Score=27.17 Aligned_cols=53 Identities=13% Similarity=-0.059 Sum_probs=32.1
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
.+|| |+ +|.-|.++|..-.+.|.+++++-+.... ...-...++..|.++..+.
T Consensus 12 vlIT-Ga-s~giG~~~a~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~ 64 (253)
T 3qiv_A 12 GIVT-GS-GGGIGQAYAEALAREGAAVVVADINAEA-------AEAVAKQIVADGGTAISVA 64 (253)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCEEEEEE
T ss_pred EEEE-CC-CChHHHHHHHHHHHCCCEEEEEcCCHHH-------HHHHHHHHHhcCCcEEEEE
Confidence 3454 54 4788999999999999987766443211 0112334455576766654
No 158
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=55.37 E-value=14 Score=33.89 Aligned_cols=49 Identities=14% Similarity=0.074 Sum_probs=36.1
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 157 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v 157 (315)
++|+..| .|.-|.+++..|+.+|.+.+++.+.. .+...++.+||+.++.
T Consensus 191 ~~VlV~G--~G~vG~~a~qla~~~Ga~Vi~~~~~~-----------~~~~~~~~lGa~~vi~ 239 (363)
T 3uog_A 191 DRVVVQG--TGGVALFGLQIAKATGAEVIVTSSSR-----------EKLDRAFALGADHGIN 239 (363)
T ss_dssp CEEEEES--SBHHHHHHHHHHHHTTCEEEEEESCH-----------HHHHHHHHHTCSEEEE
T ss_pred CEEEEEC--CCHHHHHHHHHHHHcCCEEEEEecCc-----------hhHHHHHHcCCCEEEc
Confidence 4566565 37899999999999999866654321 3677889999986554
No 159
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=55.30 E-value=18 Score=32.65 Aligned_cols=50 Identities=16% Similarity=0.060 Sum_probs=36.1
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 157 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v 157 (315)
++|+..|+ +|.-|++++..|+.+|.+.+++.+.. .+...++.+|++.++-
T Consensus 146 ~~VlV~Ga-~g~iG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~lga~~~~~ 195 (340)
T 3gms_A 146 DVLLVNAC-GSAIGHLFAQLSQILNFRLIAVTRNN-----------KHTEELLRLGAAYVID 195 (340)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHHTCEEEEEESSS-----------TTHHHHHHHTCSEEEE
T ss_pred CEEEEeCC-ccHHHHHHHHHHHHcCCEEEEEeCCH-----------HHHHHHHhCCCcEEEe
Confidence 45665554 46889999999999999866665432 2477888899986653
No 160
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=55.09 E-value=95 Score=26.13 Aligned_cols=31 Identities=13% Similarity=0.105 Sum_probs=23.1
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
+++..|+ +|--|+++|..-.+.|.+++++.+
T Consensus 6 ~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r 36 (246)
T 2uvd_A 6 VALVTGA-SRGIGRAIAIDLAKQGANVVVNYA 36 (246)
T ss_dssp EEEETTC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3443454 478999999999999998877765
No 161
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=54.92 E-value=14 Score=33.68 Aligned_cols=50 Identities=18% Similarity=0.248 Sum_probs=36.2
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 157 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v 157 (315)
++|+..|| +|.-|++++..|+.+|.+++++.+.. .+...++.+|++.+..
T Consensus 169 ~~VlV~Gg-~g~iG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~lGa~~~~~ 218 (353)
T 4dup_A 169 ESVLIHGG-TSGIGTTAIQLARAFGAEVYATAGST-----------GKCEACERLGAKRGIN 218 (353)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHHTCSEEEE
T ss_pred CEEEEEcC-CCHHHHHHHHHHHHcCCEEEEEeCCH-----------HHHHHHHhcCCCEEEe
Confidence 45665554 47899999999999999866554321 3577888899986653
No 162
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=54.75 E-value=22 Score=32.33 Aligned_cols=53 Identities=19% Similarity=0.104 Sum_probs=37.8
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ +|--|++++..|+.+|.+.++++...... ..+...++.+||+.++
T Consensus 169 ~~VlV~Ga-~G~vG~~aiqlak~~Ga~vi~~~~~~~~~-------~~~~~~~~~lGa~~vi 221 (357)
T 1zsy_A 169 DSVIQNAS-NSGVGQAVIQIAAALGLRTINVVRDRPDI-------QKLSDRLKSLGAEHVI 221 (357)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHHTCEEEEEECCCSCH-------HHHHHHHHHTTCSEEE
T ss_pred CEEEEeCC-cCHHHHHHHHHHHHcCCEEEEEecCccch-------HHHHHHHHhcCCcEEE
Confidence 56666654 47899999999999999988777543210 1246778899998654
No 163
>1nba_A N-carbamoylsarcosine amidohydrolase; hydrolase(IN linear amides); 2.00A {Arthrobacter SP} SCOP: c.33.1.3
Probab=54.73 E-value=16 Score=32.38 Aligned_cols=84 Identities=18% Similarity=0.057 Sum_probs=51.3
Q ss_pred CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEecCCchhHHHH-HHHHHHHHcCCeEEEEecCCCcccCCCC
Q 021235 60 NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCR-AAAVAAKYLNLDCYLILRTSKVLVDQDP 138 (315)
Q Consensus 60 g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg~-alA~aa~~lGl~~~ivvp~~~~~~~~~p 138 (315)
+-.++-|.- . ++|..-.+..+| +++|+++||.+| ...|.|. ++|.-|..+|++++++-+......++
T Consensus 138 ~d~vi~K~~-~-----SaF~~T~L~~~L---r~~gi~~lvI~G-v~T~~CV~~Ta~dA~~~Gy~V~Vv~DA~as~~~~-- 205 (264)
T 1nba_A 138 GEVVIEKNR-A-----SAFPGTNLELFL---TSNRIDTLIVTG-ATAAGCVRHTVEDAIAKGFRPIIPRETIGDRVPG-- 205 (264)
T ss_dssp TCEEEEESS-S-----SSSTTSSHHHHH---HHTTCCEEEEEE-ECTTTHHHHHHHHHHHHTCEEEEEGGGEECSSSS--
T ss_pred CCEEEeCCc-C-----CCcccchHHHHH---HhCCCCEEEEEe-cCcCCHHHHHHHHHHHCCCEEEEeccccCCCCHH--
Confidence 446777753 2 333222343333 457999999875 5567777 88999999999999887765432111
Q ss_pred CccchHHHHHhCCCEEE
Q 021235 139 GLIGNLLVERLVGAHIE 155 (315)
Q Consensus 139 ~~~~n~~~~r~~GAeV~ 155 (315)
.+...+..++..+++|+
T Consensus 206 ~h~~aL~~m~~~~~~vi 222 (264)
T 1nba_A 206 VVQWNLYDIDNKFGDVE 222 (264)
T ss_dssp HHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHhcCcEEe
Confidence 11233555666566655
No 164
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=54.69 E-value=1e+02 Score=26.47 Aligned_cols=32 Identities=31% Similarity=0.307 Sum_probs=23.7
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
..||| |++ |--|.++|....+.|.+++++-+.
T Consensus 12 ~~lVT-Gas-~gIG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 12 TALIT-GGA-RGMGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp EEEEE-TTT-SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred EEEEe-CCC-chHHHHHHHHHHHCCCeEEEEeCC
Confidence 34554 544 678999999999999997776554
No 165
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=54.53 E-value=1e+02 Score=26.39 Aligned_cols=32 Identities=25% Similarity=0.219 Sum_probs=23.7
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
..||| |++ |--|.++|..-.+.|.+++++-..
T Consensus 12 ~vlVT-Gas-~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 12 VVLVT-GGA-RGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp EEEEE-TTT-SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred EEEEe-CCC-ChHHHHHHHHHHHCCCeEEEEccc
Confidence 34554 543 678999999999999998777544
No 166
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=54.27 E-value=1.2e+02 Score=27.08 Aligned_cols=32 Identities=25% Similarity=0.241 Sum_probs=24.4
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
+++..|+ +|--|.++|....+.|.++++.++.
T Consensus 7 ~vlVTGa-s~GIG~aia~~L~~~G~~V~~~~r~ 38 (324)
T 3u9l_A 7 IILITGA-SSGFGRLTAEALAGAGHRVYASMRD 38 (324)
T ss_dssp EEEESSC-SSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECC-CcHHHHHHHHHHHHCCCEEEEecCc
Confidence 3443454 4789999999999999998887765
No 167
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=54.07 E-value=14 Score=33.52 Aligned_cols=49 Identities=16% Similarity=0.056 Sum_probs=34.7
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ |.-|.+.+..|+.+|.+-++.+.... .+..+++.+||+.++
T Consensus 168 ~~VlV~Ga--G~vG~~a~qla~~~Ga~~Vi~~~~~~----------~~~~~~~~lGa~~vi 216 (352)
T 3fpc_A 168 DTVCVIGI--GPVGLMSVAGANHLGAGRIFAVGSRK----------HCCDIALEYGATDII 216 (352)
T ss_dssp CCEEEECC--SHHHHHHHHHHHTTTCSSEEEECCCH----------HHHHHHHHHTCCEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCcEEEEECCCH----------HHHHHHHHhCCceEE
Confidence 44554553 78999999999999995444444322 368889999998655
No 168
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=54.01 E-value=17 Score=32.57 Aligned_cols=48 Identities=10% Similarity=0.019 Sum_probs=34.3
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
+|+..|+ +|.-|++++..|+.+|.+.+++.+.. .+...++.+||+.+.
T Consensus 153 ~VlV~Ga-~G~vG~~~~q~a~~~Ga~vi~~~~~~-----------~~~~~~~~lGa~~v~ 200 (330)
T 1tt7_A 153 SVLVTGA-TGGVGGIAVSMLNKRGYDVVASTGNR-----------EAADYLKQLGASEVI 200 (330)
T ss_dssp CEEEEST-TSHHHHHHHHHHHHHTCCEEEEESSS-----------STHHHHHHHTCSEEE
T ss_pred eEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHcCCcEEE
Confidence 4555554 47899999999999999866555432 146777889997554
No 169
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=53.94 E-value=66 Score=27.47 Aligned_cols=53 Identities=17% Similarity=0.025 Sum_probs=32.4
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
.||| |+ +|--|.++|..-.+.|.+++++-+.... .......++..|.++..+.
T Consensus 15 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~ 67 (256)
T 3gaf_A 15 AIVT-GA-AAGIGRAIAGTFAKAGASVVVTDLKSEG-------AEAVAAAIRQAGGKAIGLE 67 (256)
T ss_dssp EEEC-SC-SSHHHHHHHHHHHHHTCEEEEEESSHHH-------HHHHHHHHHHTTCCEEEEE
T ss_pred EEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCcEEEEE
Confidence 3454 54 4678999999989999997766443211 0112344556677766654
No 170
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=53.93 E-value=69 Score=27.75 Aligned_cols=53 Identities=13% Similarity=-0.027 Sum_probs=32.2
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
++..|+ +|--|+++|..-.+.|.+++++-+.... ...-...++..|.++..+.
T Consensus 7 ~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~ 59 (264)
T 3tfo_A 7 ILITGA-SGGIGEGIARELGVAGAKILLGARRQAR-------IEAIATEIRDAGGTALAQV 59 (264)
T ss_dssp EEESST-TSHHHHHHHHHHHHTTCEEEEEESSHHH-------HHHHHHHHHHTTCEEEEEE
T ss_pred EEEeCC-ccHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEE
Confidence 333454 4678999999999999987776543221 0112344555677776654
No 171
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=53.58 E-value=87 Score=27.44 Aligned_cols=85 Identities=9% Similarity=-0.015 Sum_probs=45.6
Q ss_pred CcEEeCCCCCchh-hHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCC-c--
Q 021235 184 RPYVIPVGGSNSI-GTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDD-P-- 259 (315)
Q Consensus 184 ~~y~ip~g~~n~~-~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~-~-- 259 (315)
..+++|....+.. ....-...+.+..+++- +.+ -++++|+|.|+..++..+......-.+.-|+..|. .
T Consensus 28 ~v~Vvp~~~~~~~~~~~~lg~~aA~~L~~~l------~~~-~vIGv~wG~Tl~~v~~~l~~~~~~~~~~~V~l~Gg~~~~ 100 (266)
T 3efb_A 28 DVVVVSGNDEDEETQLAMMGLHGAQLLDRLL------EPG-DIVGFSWGRAVSALVENLPQAGQSRQLICVPIIGGPSGK 100 (266)
T ss_dssp EEEEECCCSCCHHHHHHHHHHHHHHHHHHHC------CTT-CEEEECCSHHHHHHHHTCCCCSSCCCCEEEESBCBCTTS
T ss_pred EEEEEcCCCCChHHHHHHHHHHHHHHHHHhC------CCC-CEEEEcccHHHHHHHHhcCccCCCCCeEEEEcCCCCCCC
Confidence 5678886433322 22222233444444442 233 36899999999999988764322123455666655 1
Q ss_pred ---hhhH-HHHHHHHhhhcC
Q 021235 260 ---DYFY-DYTQGLLDGLNA 275 (315)
Q Consensus 260 ---~~~~-~~i~~l~~g~~~ 275 (315)
.+.. .-+.++++.++.
T Consensus 101 ~~~~~~~n~i~~~lA~~~~~ 120 (266)
T 3efb_A 101 LESRYHVNTLTYSAAAKLKG 120 (266)
T ss_dssp SCGGGCHHHHHHHHHHHTTC
T ss_pred CccccCHHHHHHHHHHHhCC
Confidence 2222 224556776765
No 172
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=53.29 E-value=1.1e+02 Score=26.22 Aligned_cols=31 Identities=10% Similarity=0.026 Sum_probs=22.4
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
+++..|+ +|--|.++|..-.+.|.+++++..
T Consensus 27 ~vlITGa-s~gIG~~~a~~l~~~G~~v~~~~~ 57 (269)
T 3gk3_A 27 VAFVTGG-MGGLGAAISRRLHDAGMAVAVSHS 57 (269)
T ss_dssp EEEETTT-TSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred EEEEECC-CchHHHHHHHHHHHCCCEEEEEcC
Confidence 3443454 478899999999999998777653
No 173
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=53.29 E-value=25 Score=27.01 Aligned_cols=30 Identities=10% Similarity=-0.073 Sum_probs=23.7
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
++++.+|+ |..|.++|......|++++++-
T Consensus 7 ~~v~I~G~--G~iG~~la~~L~~~g~~V~~id 36 (141)
T 3llv_A 7 YEYIVIGS--EAAGVGLVRELTAAGKKVLAVD 36 (141)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCeEEEEE
Confidence 34555665 8899999999999999887764
No 174
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=53.18 E-value=1e+02 Score=25.94 Aligned_cols=35 Identities=6% Similarity=-0.028 Sum_probs=27.4
Q ss_pred CCCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEecc
Q 021235 220 KFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVC 256 (315)
Q Consensus 220 ~~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~~ 256 (315)
++|+||+. +...+.|+..++++.+. ++.|+|++-.
T Consensus 177 ~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d~~ 215 (277)
T 3e61_A 177 SIDSIICS--NDLLAINVLGIVQRYHFKVPAEIQIIGYDNI 215 (277)
T ss_dssp TCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEECSBCC
T ss_pred CCCEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEeeCCc
Confidence 58999986 56788899999998763 5778887643
No 175
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=53.06 E-value=1e+02 Score=26.04 Aligned_cols=163 Identities=10% Similarity=-0.022 Sum_probs=81.3
Q ss_pred HHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCccc---CCCCCccch--HHHHHh--CCC-EEEE
Q 021235 85 FLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLV---DQDPGLIGN--LLVERL--VGA-HIEL 156 (315)
Q Consensus 85 ~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~---~~~p~~~~n--~~~~r~--~GA-eV~~ 156 (315)
..+..+..++++.||.... ...........++..|++++++-....... ..+....+. ...+.. .|. +|.+
T Consensus 52 ~~~~~l~~~~vdgiIi~~~-~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~V~~D~~~~g~~~~~~l~~~~~g~~~i~~ 130 (291)
T 3l49_A 52 SQIQTLIAQKPDAIIEQLG-NLDVLNPWLQKINDAGIPLFTVDTATPHAINNTTSNNYSIGAELALQMVADLGGKGNVLV 130 (291)
T ss_dssp HHHHHHHHHCCSEEEEESS-CHHHHHHHHHHHHHTTCCEEEESCCCTTCSEEEEECHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHcCCCEEEEeCC-ChhhhHHHHHHHHHCCCcEEEecCCCCCcCceEecChHHHHHHHHHHHHHHcCCCceEEE
Confidence 3466677789999986543 334455566677788999877643221100 000000011 112222 565 4666
Q ss_pred EcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCC---CCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhh
Q 021235 157 ISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVG---GSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGT 233 (315)
Q Consensus 157 v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g---~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt 233 (315)
+.... +.....++.+-..+.+++.+ ..-++... ..+.....++ ....++.++-++ ..++|+||+. +...
T Consensus 131 i~~~~-~~~~~~~R~~gf~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~---~~~~~ai~~~--~d~~ 202 (291)
T 3l49_A 131 FNGFY-SVPVCKIRYDQMKYVLEAFP-DVKIIEPELRDVIPNTIQSAY-SNVTDMLTKYPN---EGDVGAIWAC--WDVP 202 (291)
T ss_dssp ECSCT-TSHHHHHHHHHHHHHHHTCT-TEEECSSCBCCCSSSHHHHHH-HHHHHHHHHCCS---TTSCCEEEES--SHHH
T ss_pred EeCCC-CCchHHHHHHHHHHHHHHCC-CCEEEeeeccCCCCCCHHHHH-HHHHHHHHhCCC---cCCcCEEEEC--CCch
Confidence 65321 11011223333444444431 11112211 1111122233 344455443210 0168999864 6778
Q ss_pred HHHHHHHHhcCCC-CCeEEEEecc
Q 021235 234 IAGLSLGSWLGTL-KAKVHAFSVC 256 (315)
Q Consensus 234 ~aGl~~~~k~~~~-~~rVigV~~~ 256 (315)
+.|+..++++.+. ++.|+|++-.
T Consensus 203 a~g~~~al~~~g~~di~vvg~d~~ 226 (291)
T 3l49_A 203 MIGATQALQAAGRTDIRTYGVDGS 226 (291)
T ss_dssp HHHHHHHHHHTTCCSCEEEEEECC
T ss_pred HHHHHHHHHHcCCCCeEEEEecCC
Confidence 8999999999876 8888888754
No 176
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=52.82 E-value=1.2e+02 Score=26.56 Aligned_cols=35 Identities=11% Similarity=0.049 Sum_probs=27.4
Q ss_pred CCCeEEEeCCchhhHHHHHHHHhcCCC--CCeEEEEecc
Q 021235 220 KFDDIVVACGSGGTIAGLSLGSWLGTL--KAKVHAFSVC 256 (315)
Q Consensus 220 ~~D~ivv~vGtGGt~aGl~~~~k~~~~--~~rVigV~~~ 256 (315)
++|+||+ .+..++.|+..++++.+. ++.|+|++-.
T Consensus 197 ~~~aI~~--~nd~~A~g~~~al~~~G~~~di~vvg~D~~ 233 (332)
T 2rjo_A 197 KIKGVWA--ANDDMALGAIEALRAEGLAGQIPVTGMDGT 233 (332)
T ss_dssp GEEEEEE--SSHHHHHHHHHHHHHTTCBTTBCEECSBCC
T ss_pred CeeEEEE--CCCchHHHHHHHHHHcCCCCCCEEEeecCC
Confidence 5899887 456788999999998775 6788887643
No 177
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=52.66 E-value=45 Score=28.90 Aligned_cols=32 Identities=19% Similarity=0.146 Sum_probs=24.1
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 130 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~ 130 (315)
.||| |+ ++--|+++|..-.+.|.+++++-+..
T Consensus 9 ~lVT-Ga-s~GIG~aia~~la~~G~~V~~~~r~~ 40 (274)
T 3e03_A 9 LFIT-GA-SRGIGLAIALRAARDGANVAIAAKSA 40 (274)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred EEEE-CC-CChHHHHHHHHHHHCCCEEEEEeccc
Confidence 3454 54 46889999999999999887776554
No 178
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=52.57 E-value=21 Score=32.32 Aligned_cols=49 Identities=14% Similarity=0.095 Sum_probs=34.6
Q ss_pred CEEEecCCchhHHHHHHHHHHHHc-CCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYL-NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 157 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~l-Gl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v 157 (315)
++|+..|+ |.-|++.+..|+.+ |.+.+.+-.. ..+..+++.+||+.+..
T Consensus 173 ~~vlv~Ga--G~vG~~a~qla~~~g~~~Vi~~~~~-----------~~~~~~~~~lGa~~~i~ 222 (345)
T 3jv7_A 173 STAVVIGV--GGLGHVGIQILRAVSAARVIAVDLD-----------DDRLALAREVGADAAVK 222 (345)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHCCCEEEEEESC-----------HHHHHHHHHTTCSEEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCEEEEEcCC-----------HHHHHHHHHcCCCEEEc
Confidence 55665554 78999999999999 5555554332 23688899999986653
No 179
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=52.48 E-value=66 Score=28.10 Aligned_cols=34 Identities=29% Similarity=0.176 Sum_probs=23.7
Q ss_pred CCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 94 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 94 G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
+...||| |++ |--|.++|..-.+.|.+++++-+.
T Consensus 28 ~k~~lVT-Gas-~GIG~aia~~la~~G~~V~~~~r~ 61 (283)
T 3v8b_A 28 SPVALIT-GAG-SGIGRATALALAADGVTVGALGRT 61 (283)
T ss_dssp CCEEEEE-SCS-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEE-CCC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3334554 543 678999999888999987776543
No 180
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=52.47 E-value=75 Score=27.14 Aligned_cols=54 Identities=17% Similarity=0.023 Sum_probs=32.4
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
+++..|+ +|--|.++|....+.|.+++++-+.... .......++..|.++..+.
T Consensus 31 ~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~ 84 (262)
T 3rkr_A 31 VAVVTGA-SRGIGAAIARKLGSLGARVVLTARDVEK-------LRAVEREIVAAGGEAESHA 84 (262)
T ss_dssp EEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECC-CChHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHHhCCceeEEE
Confidence 3443454 4678999999988999987666443221 0112334455677766654
No 181
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=52.34 E-value=22 Score=32.64 Aligned_cols=49 Identities=12% Similarity=0.020 Sum_probs=34.8
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ |.-|++.+..|+.+|.+-++.+.... .++.+++.+||+.++
T Consensus 195 ~~VlV~Ga--G~vG~~a~q~a~~~Ga~~Vi~~~~~~----------~~~~~a~~lGa~~vi 243 (378)
T 3uko_A 195 SNVAIFGL--GTVGLAVAEGAKTAGASRIIGIDIDS----------KKYETAKKFGVNEFV 243 (378)
T ss_dssp CCEEEECC--SHHHHHHHHHHHHHTCSCEEEECSCT----------THHHHHHTTTCCEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCeEEEEcCCH----------HHHHHHHHcCCcEEE
Confidence 44554554 78999999999999995444443222 268889999998654
No 182
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=52.25 E-value=82 Score=27.31 Aligned_cols=56 Identities=20% Similarity=0.090 Sum_probs=33.5
Q ss_pred CCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 94 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 94 G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
|...||| |++ |--|.++|..-.+.|.+++++-+.... .......++..|.++..+.
T Consensus 24 ~k~~lVT-Gas-~GIG~aia~~la~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~ 79 (279)
T 3sju_A 24 PQTAFVT-GVS-SGIGLAVARTLAARGIAVYGCARDAKN-------VSAAVDGLRAAGHDVDGSS 79 (279)
T ss_dssp -CEEEEE-STT-SHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHTTTCCEEEEE
T ss_pred CCEEEEe-CCC-CHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCcEEEEE
Confidence 4334555 544 678999999888999987766543211 0122444556677776654
No 183
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=52.15 E-value=17 Score=31.71 Aligned_cols=25 Identities=20% Similarity=0.042 Sum_probs=22.1
Q ss_pred hhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 105 QSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 105 ~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
+|-.|.++|.+++..|.+++++...
T Consensus 33 Sg~iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 33 SGKMGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred ccHHHHHHHHHHHHCCCEEEEEECC
Confidence 6899999999999999999887543
No 184
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=52.09 E-value=23 Score=32.36 Aligned_cols=50 Identities=8% Similarity=0.021 Sum_probs=35.2
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 155 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~ 155 (315)
++|+..|+ |.-|.+++..|+.+|.+.+++.+.... ..+...++.+||+.+
T Consensus 182 ~~VlV~Ga--G~vG~~~~q~a~~~Ga~Vi~~~~~~~~--------~~~~~~~~~~ga~~v 231 (366)
T 2cdc_A 182 RKVLVVGT--GPIGVLFTLLFRTYGLEVWMANRREPT--------EVEQTVIEETKTNYY 231 (366)
T ss_dssp CEEEEESC--HHHHHHHHHHHHHHTCEEEEEESSCCC--------HHHHHHHHHHTCEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCEEEEEeCCccc--------hHHHHHHHHhCCcee
Confidence 45655665 789999999999999976665443200 125677888999866
No 185
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=52.06 E-value=1.3e+02 Score=26.68 Aligned_cols=31 Identities=19% Similarity=0.054 Sum_probs=23.0
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
+++..|+ +|--|.++|..-.+.|.+++++-.
T Consensus 29 ~vlVTGa-s~GIG~aia~~la~~G~~Vv~~~r 59 (322)
T 3qlj_A 29 VVIVTGA-GGGIGRAHALAFAAEGARVVVNDI 59 (322)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTCEEEEECC
T ss_pred EEEEECC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3443454 468899999999999998887754
No 186
>3txy_A Isochorismatase family protein family; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.70A {Burkholderia thailandensis} SCOP: c.33.1.0
Probab=51.86 E-value=10 Score=31.97 Aligned_cols=63 Identities=16% Similarity=0.084 Sum_probs=40.8
Q ss_pred CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEecCCchhHHH-HHHHHHHHHcCCeEEEEecCCCc
Q 021235 60 NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKV 132 (315)
Q Consensus 60 g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg-~alA~aa~~lGl~~~ivvp~~~~ 132 (315)
+-.++-|.- . ++|..-.+..+| ++.|.++||.+|- ..|.| .++|.-|..+|++++++.+....
T Consensus 100 ~~~vi~K~~-~-----saf~~t~L~~~L---~~~gi~~lvi~G~-~t~~CV~~Ta~~a~~~G~~v~v~~Da~~~ 163 (199)
T 3txy_A 100 LDVVVTKHQ-W-----GAFTGTDLDVQL---RRRGITDIVLTGI-ATNIGVESTAREAYENNYNVVVVSDAVST 163 (199)
T ss_dssp TSEEEEESS-S-----SSSTTSSHHHHH---HHTTCCEEEEEEE-CTTTHHHHHHHHHHHTTCEEEEEEEEEEB
T ss_pred CeEEEECCC-c-----CccccCcHHHHH---HhCCCCEEEEEee-ccCHHHHHHHHHHHHCCCEEEEecHhhcC
Confidence 446677763 2 233222343333 4579999998764 45555 47888899999999999876543
No 187
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=51.75 E-value=94 Score=26.38 Aligned_cols=35 Identities=9% Similarity=0.081 Sum_probs=25.0
Q ss_pred CEEEecCCch-hHHHHHHHHHHHHcCCeEEEEecCC
Q 021235 96 DCIITIGGIQ-SNHCRAAAVAAKYLNLDCYLILRTS 130 (315)
Q Consensus 96 ~~vVt~g~s~-GNhg~alA~aa~~lGl~~~ivvp~~ 130 (315)
++++..|+++ +--|.++|....+.|.+++++....
T Consensus 21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~ 56 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASR 56 (267)
T ss_dssp CEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSS
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCc
Confidence 3444446553 5789999999999999888776543
No 188
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=51.66 E-value=1.2e+02 Score=26.19 Aligned_cols=55 Identities=9% Similarity=0.008 Sum_probs=32.8
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
+++..|+ +|--|+++|....+.|.+++++.+...... ..-...++..|.++..+.
T Consensus 31 ~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~~~~ 85 (283)
T 1g0o_A 31 VALVTGA-GRGIGREMAMELGRRGCKVIVNYANSTESA------EEVVAAIKKNGSDAACVK 85 (283)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHHHTTCCEEEEE
T ss_pred EEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCchHHH------HHHHHHHHHhCCCeEEEE
Confidence 3443454 468999999999999998777655432100 011233455676666554
No 189
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=51.58 E-value=1.1e+02 Score=25.88 Aligned_cols=33 Identities=6% Similarity=-0.131 Sum_probs=25.9
Q ss_pred CCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEec
Q 021235 221 FDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSV 255 (315)
Q Consensus 221 ~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~ 255 (315)
+|+||+. +..++.|+..++++.+. ++.|+|++-
T Consensus 202 ~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d~ 238 (298)
T 3tb6_A 202 PTAILCY--NDEIALKVIDMLREMDLKVPEDMSIVGYDD 238 (298)
T ss_dssp CSEEECS--SHHHHHHHHHHHHHTTCCTTTTCEEECSBC
T ss_pred CeEEEEe--CcHHHHHHHHHHHHcCCCCCCceEEEecCC
Confidence 8999865 66788899999998763 567888764
No 190
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=51.45 E-value=1e+02 Score=26.64 Aligned_cols=31 Identities=16% Similarity=0.001 Sum_probs=22.0
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
+++..|+ +|--|.++|..-.+.|.+++++-+
T Consensus 30 ~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r 60 (270)
T 3ftp_A 30 VAIVTGA-SRGIGRAIALELARRGAMVIGTAT 60 (270)
T ss_dssp EEEETTC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECC-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 3443454 467899999888889998776654
No 191
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=51.21 E-value=68 Score=27.58 Aligned_cols=35 Identities=14% Similarity=0.098 Sum_probs=23.1
Q ss_pred CCCEEEecCCch-hHHHHHHHHHHHHcCCeEEEEecC
Q 021235 94 GADCIITIGGIQ-SNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 94 G~~~vVt~g~s~-GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
|...||| |+++ .--|+++|...++.|.++++.-+.
T Consensus 6 gK~alVT-Gaa~~~GIG~aiA~~la~~Ga~Vvi~~r~ 41 (256)
T 4fs3_A 6 NKTYVIM-GIANKRSIAFGVAKVLDQLGAKLVFTYRK 41 (256)
T ss_dssp TCEEEEE-CCCSTTCHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEE-CCCCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 4344565 5432 247888888888999987776543
No 192
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=51.19 E-value=24 Score=32.12 Aligned_cols=53 Identities=25% Similarity=0.270 Sum_probs=36.1
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ +|--|++++..|+.+|.+.+++....... ......++.+||+.++
T Consensus 169 ~~VlV~Ga-~G~vG~~aiqlak~~Ga~vi~~~~~~~~~-------~~~~~~~~~lGa~~vi 221 (364)
T 1gu7_A 169 DWFIQNGG-TSAVGKYASQIGKLLNFNSISVIRDRPNL-------DEVVASLKELGATQVI 221 (364)
T ss_dssp CEEEESCT-TSHHHHHHHHHHHHHTCEEEEEECCCTTH-------HHHHHHHHHHTCSEEE
T ss_pred cEEEECCC-CcHHHHHHHHHHHHCCCEEEEEecCcccc-------HHHHHHHHhcCCeEEE
Confidence 56665654 47899999999999999877776543210 0124566889998654
No 193
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=51.08 E-value=37 Score=29.11 Aligned_cols=79 Identities=10% Similarity=-0.050 Sum_probs=51.3
Q ss_pred chhHHHHHHHHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCC--CCCccchHHHHHhCCCE
Q 021235 76 SGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQ--DPGLIGNLLVERLVGAH 153 (315)
Q Consensus 76 gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~--~p~~~~n~~~~r~~GAe 153 (315)
.-|-...+...+++|.+.|+++||.+ |++|-.+..++-.. -| +.++|... .....+ +.-.....+.++..|.+
T Consensus 33 ~eNT~~tl~la~era~e~~Ik~iVVA-SssG~TA~k~~e~~--~~-~lVvVTh~-~GF~~pg~~e~~~e~~~~L~~~G~~ 107 (206)
T 1t57_A 33 KENTERVLELVGERADQLGIRNFVVA-SVSGETALRLSEMV--EG-NIVSVTHH-AGFREKGQLELEDEARDALLERGVN 107 (206)
T ss_dssp GGGHHHHHHHHHHHHHHHTCCEEEEE-CSSSHHHHHHHTTC--CS-EEEEECCC-TTSSSTTCCSSCHHHHHHHHHHTCE
T ss_pred cccHHHHHHHHHHHHHHcCCCEEEEE-eCCCHHHHHHHHHc--cC-CEEEEeCc-CCCCCCCCCcCCHHHHHHHHhCCCE
Confidence 34888888888999999999999876 45677775554422 45 66666522 111110 01114578889999999
Q ss_pred EEEEcC
Q 021235 154 IELISK 159 (315)
Q Consensus 154 V~~v~~ 159 (315)
|+.-..
T Consensus 108 V~t~tH 113 (206)
T 1t57_A 108 VYAGSH 113 (206)
T ss_dssp EECCSC
T ss_pred EEEeec
Confidence 987654
No 194
>2gnp_A Transcriptional regulator; structural genomics, MCSG, APC84799, streptococcus pneumonia PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae} SCOP: c.124.1.8
Probab=50.96 E-value=1.2e+02 Score=26.41 Aligned_cols=93 Identities=6% Similarity=-0.010 Sum_probs=47.6
Q ss_pred HHHHHHHh-C-CCcEEeCC-CCCchh-hHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcC-CCCC
Q 021235 174 LKEKLLKE-G-RRPYVIPV-GGSNSI-GTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLG-TLKA 248 (315)
Q Consensus 174 ~~~~l~~~-~-~~~y~ip~-g~~n~~-~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~-~~~~ 248 (315)
+.+++++. + ...+++|. ...... ....-...+.++..+.- +++ -++++++|.|..+++..+... .+++
T Consensus 12 Le~~L~~~fgL~~~~Vv~~~~~~~~~~~~~~l~~~aA~~l~~~l------~~~-~viGla~G~T~~~~~~~l~~~~~~~v 84 (266)
T 2gnp_A 12 LENYVKEKYSLESLEIIPNEFDDTPTILSERISQVAAGVLRNLI------DDN-MKIGFSWGKSLSNLVDLIHSKSVRNV 84 (266)
T ss_dssp HHHHHHHHHTCSEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC------CTT-CEEEECCSHHHHHHHHHCCCCCCSSC
T ss_pred HHHHHHHHhCCCeEEEeCCCCCCchhHHHHHHHHHHHHHHHHhC------CCC-CEEEECChHHHHHHHHhccccCCCCC
Confidence 44455544 2 34677875 222221 12222233344444331 233 358899999999999998653 3455
Q ss_pred eEEEEeccCC------chhhHHHHHHHHhhhcC
Q 021235 249 KVHAFSVCDD------PDYFYDYTQGLLDGLNA 275 (315)
Q Consensus 249 rVigV~~~g~------~~~~~~~i~~l~~g~~~ 275 (315)
+++-.. |. ..+...-..+|++.++.
T Consensus 85 ~~v~L~--ggl~~~~~~~~~~~~~~~la~~~~~ 115 (266)
T 2gnp_A 85 HFYPLA--GGPSHIHAKYHVNTLIYEMSRKFHG 115 (266)
T ss_dssp EEEESB--CCCTTSCGGGSHHHHHHHHHHHHTC
T ss_pred EEEECC--CCCCCCccccCHHHHHHHHHHHhCC
Confidence 554333 32 11222234556666665
No 195
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=50.93 E-value=29 Score=31.72 Aligned_cols=49 Identities=18% Similarity=0.041 Sum_probs=34.6
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ |.-|+.++..|+.+|.+-++.+.... .+..+++.+||+.++
T Consensus 193 ~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~~----------~~~~~a~~lGa~~vi 241 (373)
T 1p0f_A 193 STCAVFGL--GGVGFSAIVGCKAAGASRIIGVGTHK----------DKFPKAIELGATECL 241 (373)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHTCSEEEEECSCG----------GGHHHHHHTTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCeEEEECCCH----------HHHHHHHHcCCcEEE
Confidence 45655653 78999999999999995444443322 257788999997554
No 196
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=50.66 E-value=27 Score=32.01 Aligned_cols=49 Identities=12% Similarity=0.116 Sum_probs=34.4
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..| + |--|++++..|+.+|.+-++.+..+. .+...++.+||+.++
T Consensus 197 ~~VlV~G-a-G~vG~~aiqlak~~Ga~~Vi~~~~~~----------~~~~~a~~lGa~~vi 245 (376)
T 1e3i_A 197 STCAVFG-L-GCVGLSAIIGCKIAGASRIIAIDING----------EKFPKAKALGATDCL 245 (376)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHTTCSEEEEECSCG----------GGHHHHHHTTCSEEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHcCCCeEEEEcCCH----------HHHHHHHHhCCcEEE
Confidence 4565565 3 78999999999999995444443221 257788999997554
No 197
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=50.26 E-value=36 Score=28.69 Aligned_cols=58 Identities=12% Similarity=0.103 Sum_probs=41.8
Q ss_pred HHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHHHHHHHHh
Q 021235 206 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLD 271 (315)
Q Consensus 206 ~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~~i~~l~~ 271 (315)
.|+.++..+ ...+.|++..|.-+.+.|+..++- ...||||.+..+..........+++
T Consensus 58 ~~~~~~a~~----~g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~dsLlSivq 115 (183)
T 1o4v_A 58 FEYAKNAEE----RGIEVIIAGAGGAAHLPGMVASIT----HLPVIGVPVKTSTLNGLDSLFSIVQ 115 (183)
T ss_dssp HHHHHHTTT----TTCCEEEEEEESSCCHHHHHHHHC----SSCEEEEEECCTTTTTHHHHHHHHT
T ss_pred HHHHHHHHh----CCCcEEEEecCcccccHHHHHhcc----CCCEEEeeCCCCCCCcHHHHHHHhc
Confidence 466665542 347899999999999999999984 5799999998764444444444443
No 198
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=50.20 E-value=1.2e+02 Score=25.93 Aligned_cols=35 Identities=9% Similarity=0.062 Sum_probs=26.9
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEec
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSV 255 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~ 255 (315)
.++|+||+. +..++.|+..++++.+. ++.|+|++-
T Consensus 196 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~D~ 234 (301)
T 3miz_A 196 DRPTAIMSG--NDEMAIQIYIAAMALGLRIPQDVSIVGFDD 234 (301)
T ss_dssp TCCSEEEES--SHHHHHHHHHHHHTTTCCHHHHCEEECSBC
T ss_pred CCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCCeeEEEeCC
Confidence 468999875 56678899999998874 466887764
No 199
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=50.17 E-value=25 Score=28.79 Aligned_cols=48 Identities=13% Similarity=0.095 Sum_probs=32.9
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 155 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~ 155 (315)
++|+..|+ +|.-|++++..++..|.+++++.+.. .+....+.+|++.+
T Consensus 40 ~~vlV~Ga-~ggiG~~~~~~~~~~G~~V~~~~~~~-----------~~~~~~~~~g~~~~ 87 (198)
T 1pqw_A 40 ERVLIHSA-TGGVGMAAVSIAKMIGARIYTTAGSD-----------AKREMLSRLGVEYV 87 (198)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHHTCEEEEEESSH-----------HHHHHHHTTCCSEE
T ss_pred CEEEEeeC-CChHHHHHHHHHHHcCCEEEEEeCCH-----------HHHHHHHHcCCCEE
Confidence 45655554 47899999999999998766554321 24556677888654
No 200
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=49.93 E-value=97 Score=27.19 Aligned_cols=54 Identities=19% Similarity=0.014 Sum_probs=32.4
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
..||| |++ |--|.++|....+.|.+++++-+..... ..-...++..|.++..+.
T Consensus 33 ~vlVT-Gas-~gIG~~la~~l~~~G~~V~~~~r~~~~~-------~~~~~~l~~~~~~~~~~~ 86 (301)
T 3tjr_A 33 AAVVT-GGA-SGIGLATATEFARRGARLVLSDVDQPAL-------EQAVNGLRGQGFDAHGVV 86 (301)
T ss_dssp EEEEE-TTT-SHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHHHHHHHHTTCCEEEEE
T ss_pred EEEEe-CCC-CHHHHHHHHHHHHCCCEEEEEECCHHHH-------HHHHHHHHhcCCceEEEE
Confidence 34454 544 6789999999999999877765432210 112334455566665554
No 201
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=49.71 E-value=1.1e+02 Score=26.28 Aligned_cols=31 Identities=16% Similarity=-0.042 Sum_probs=22.4
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
+++..|+ +|--|.++|..-.+.|.+++++-+
T Consensus 22 ~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 22 RALITGA-TKGIGADIARAFAAAGARLVLSGR 52 (266)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3443454 467899999999999998766654
No 202
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=49.67 E-value=51 Score=28.78 Aligned_cols=32 Identities=19% Similarity=0.173 Sum_probs=24.0
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 130 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~ 130 (315)
.||| |++ +--|+++|..-.+.|.+++++-+..
T Consensus 12 vlVT-Gas-~GIG~aia~~l~~~G~~V~~~~r~~ 43 (285)
T 3sc4_A 12 MFIS-GGS-RGIGLAIAKRVAADGANVALVAKSA 43 (285)
T ss_dssp EEEE-SCS-SHHHHHHHHHHHTTTCEEEEEESCC
T ss_pred EEEE-CCC-CHHHHHHHHHHHHCCCEEEEEECCh
Confidence 3454 544 6789999999999999887776554
No 203
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=49.59 E-value=58 Score=27.99 Aligned_cols=57 Identities=19% Similarity=0.065 Sum_probs=33.5
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 159 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~ 159 (315)
.||| |++ +--|.++|....+.|.+++++.+...... ....-...++..|.++..+.-
T Consensus 14 vlVT-Gas-~GIG~aia~~la~~G~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 70 (262)
T 3ksu_A 14 IVIA-GGI-KNLGALTAKTFALESVNLVLHYHQAKDSD----TANKLKDELEDQGAKVALYQS 70 (262)
T ss_dssp EEEE-TCS-SHHHHHHHHHHTTSSCEEEEEESCGGGHH----HHHHHHHHHHTTTCEEEEEEC
T ss_pred EEEE-CCC-chHHHHHHHHHHHCCCEEEEEecCccCHH----HHHHHHHHHHhcCCcEEEEEC
Confidence 3454 554 56889999998899998877654322100 001123344556777766653
No 204
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=49.37 E-value=16 Score=29.73 Aligned_cols=28 Identities=25% Similarity=0.098 Sum_probs=22.5
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLI 126 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~iv 126 (315)
+.+| .|+ |=.|.++|+..++.|++++||
T Consensus 4 dV~I-IGa--GpaGL~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 4 PIAI-IGT--GIAGLSAAQALTAAGHQVHLF 31 (336)
T ss_dssp CEEE-ECC--SHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEE-ECc--CHHHHHHHHHHHHCCCCEEEE
Confidence 3344 455 677999999999999998888
No 205
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=49.30 E-value=1.1e+02 Score=25.80 Aligned_cols=30 Identities=27% Similarity=0.194 Sum_probs=22.5
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
.+|| |+ +|.-|+++|..-.+.|.+++++.+
T Consensus 10 ~lVT-Ga-s~gIG~aia~~l~~~G~~V~~~~r 39 (247)
T 2jah_A 10 ALIT-GA-SSGIGEATARALAAEGAAVAIAAR 39 (247)
T ss_dssp EEEE-SC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEE-CC-CCHHHHHHHHHHHHCCCEEEEEEC
Confidence 3454 54 478999999999999998777654
No 206
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=49.29 E-value=31 Score=28.78 Aligned_cols=58 Identities=12% Similarity=0.117 Sum_probs=42.2
Q ss_pred HHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHHHHHHHHh
Q 021235 206 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLD 271 (315)
Q Consensus 206 ~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~~i~~l~~ 271 (315)
.|+.++..+ ...+.|++..|.-+.+.|+..++- ...||||.+.............+++
T Consensus 56 ~~~~~~a~~----~g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~daLlSivq 113 (170)
T 1xmp_A 56 FEYAETARE----RGLKVIIAGAGGAAHLPGMVAAKT----NLPVIGVPVQSKALNGLDSLLSIVQ 113 (170)
T ss_dssp HHHHHHTTT----TTCCEEEEEEESSCCHHHHHHTTC----CSCEEEEEECCTTTTTHHHHHHHHC
T ss_pred HHHHHHHHh----CCCcEEEEECCchhhhHHHHHhcc----CCCEEEeeCCCCCCCcHHHHHHHhc
Confidence 466665542 347899999999999999998864 5799999998765445555555554
No 207
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=49.26 E-value=68 Score=27.37 Aligned_cols=54 Identities=19% Similarity=0.110 Sum_probs=32.2
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
+++..|+ +|--|.++|..-.+.|.+++++-+..... ..-...++..|.++..+.
T Consensus 8 ~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~ 61 (257)
T 3imf_A 8 VVIITGG-SSGMGKGMATRFAKEGARVVITGRTKEKL-------EEAKLEIEQFPGQILTVQ 61 (257)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHHHHHHCCSTTCEEEEE
T ss_pred EEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhcCCcEEEEE
Confidence 3443454 46789999999999999877664432210 112333445666766654
No 208
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=49.23 E-value=32 Score=31.50 Aligned_cols=48 Identities=13% Similarity=0.116 Sum_probs=34.4
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ +|.-|++++..|+.+|.+.+++. . . .+...++.+||+.+.
T Consensus 185 ~~VlV~Ga-~G~vG~~~~qla~~~Ga~Vi~~~-~-~----------~~~~~~~~lGa~~v~ 232 (375)
T 2vn8_A 185 KRVLILGA-SGGVGTFAIQVMKAWDAHVTAVC-S-Q----------DASELVRKLGADDVI 232 (375)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEE-C-G----------GGHHHHHHTTCSEEE
T ss_pred CEEEEECC-CCHHHHHHHHHHHhCCCEEEEEe-C-h----------HHHHHHHHcCCCEEE
Confidence 45655554 47899999999999998765543 2 1 246778999998655
No 209
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=49.20 E-value=29 Score=32.24 Aligned_cols=47 Identities=13% Similarity=0.035 Sum_probs=33.3
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 155 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~ 155 (315)
.+|+..|+ |+-|+++|..++.+|.+ +++.+... .+....+.+|++++
T Consensus 173 ~~V~ViGa--G~iG~~aa~~a~~~Ga~-V~~~d~~~----------~~~~~~~~~Ga~~~ 219 (384)
T 1l7d_A 173 ARVLVFGV--GVAGLQAIATAKRLGAV-VMATDVRA----------ATKEQVESLGGKFI 219 (384)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCE-EEEECSCS----------TTHHHHHHTTCEEC
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCE-EEEEeCCH----------HHHHHHHHcCCeEE
Confidence 45666665 89999999999999997 44443322 13556677999865
No 210
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=49.20 E-value=96 Score=25.97 Aligned_cols=54 Identities=7% Similarity=-0.157 Sum_probs=33.3
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
+++..|+ +|--|.++|....+.|.+++++.+..... ..-...++..|.++..+.
T Consensus 7 ~vlITGa-s~gIG~~~a~~l~~~G~~v~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~ 60 (247)
T 3lyl_A 7 VALVTGA-SRGIGFEVAHALASKGATVVGTATSQASA-------EKFENSMKEKGFKARGLV 60 (247)
T ss_dssp EEEESSC-SSHHHHHHHHHHHHTTCEEEEEESSHHHH-------HHHHHHHHHTTCCEEEEE
T ss_pred EEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhcCCceEEEE
Confidence 3443454 47889999999999999877775543211 112344555676666554
No 211
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=49.10 E-value=37 Score=28.64 Aligned_cols=58 Identities=10% Similarity=0.114 Sum_probs=42.4
Q ss_pred HHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHHHHHHHHh
Q 021235 206 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLD 271 (315)
Q Consensus 206 ~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~~i~~l~~ 271 (315)
.|+.++..+ ...+.||+..|.-+.+.|+..++- ...||||.+.............+++
T Consensus 66 ~~~~~~a~~----~g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~dsLlSivq 123 (182)
T 1u11_A 66 ADYARTAAE----RGLNVIIAGAGGAAHLPGMCAAWT----RLPVLGVPVESRALKGMDSLLSIVQ 123 (182)
T ss_dssp HHHHHHTTT----TTCCEEEEEEESSCCHHHHHHHHC----SSCEEEEEECCTTTTTHHHHHHHHC
T ss_pred HHHHHHHHh----CCCcEEEEecCchhhhHHHHHhcc----CCCEEEeeCCCCCCCcHHHHHHHhc
Confidence 466665542 347899999999999999999985 5799999998765445555555554
No 212
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=48.99 E-value=33 Score=31.18 Aligned_cols=48 Identities=13% Similarity=-0.043 Sum_probs=33.1
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHH-hCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVER-LVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r-~~GAeV~~ 156 (315)
++|+..| + |--|+.++..|+.+|.+.+++.+.. .+...++ .+||+.+.
T Consensus 182 ~~VlV~G-a-G~vG~~a~qlak~~Ga~Vi~~~~~~-----------~~~~~~~~~lGa~~vi 230 (357)
T 2cf5_A 182 LRGGILG-L-GGVGHMGVKIAKAMGHHVTVISSSN-----------KKREEALQDLGADDYV 230 (357)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHHTCEEEEEESST-----------THHHHHHTTSCCSCEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHCCCeEEEEeCCh-----------HHHHHHHHHcCCceee
Confidence 4555555 3 7799999999999999755554332 2466666 89997544
No 213
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=48.87 E-value=23 Score=32.96 Aligned_cols=49 Identities=18% Similarity=0.186 Sum_probs=35.8
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ |.-|.+.+..|+.+|.+-++.+.... .+..+++.+||+.++
T Consensus 215 ~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~~----------~~~~~~~~lGa~~vi 263 (404)
T 3ip1_A 215 DNVVILGG--GPIGLAAVAILKHAGASKVILSEPSE----------VRRNLAKELGADHVI 263 (404)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCSEEEEECSCH----------HHHHHHHHHTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCCH----------HHHHHHHHcCCCEEE
Confidence 45655664 78999999999999995555544322 368889999998665
No 214
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=48.81 E-value=78 Score=27.61 Aligned_cols=30 Identities=23% Similarity=0.124 Sum_probs=20.8
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
+++..|+ +|--|.++|..-.+.|.+++++-
T Consensus 10 ~vlVTGa-s~GIG~aia~~la~~G~~V~~~~ 39 (280)
T 3tox_A 10 IAIVTGA-SSGIGRAAALLFAREGAKVVVTA 39 (280)
T ss_dssp EEEESST-TSHHHHHHHHHHHHTTCEEEECC
T ss_pred EEEEECC-CcHHHHHHHHHHHHCCCEEEEEE
Confidence 3333454 46789999998888998865543
No 215
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=48.71 E-value=60 Score=30.00 Aligned_cols=99 Identities=12% Similarity=0.019 Sum_probs=49.6
Q ss_pred HHHhCC-CEEEEEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeE
Q 021235 146 VERLVG-AHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDI 224 (315)
Q Consensus 146 ~~r~~G-AeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~i 224 (315)
.++.+| -++.+|.+....+. ...+++.+.+++.+-....++....||.- ....++.+++.+ ..+| +
T Consensus 25 ~l~~~g~~~~livtd~~~~~~---g~~~~v~~~L~~~g~~~~~~~~~~~~p~~-----~~v~~~~~~~~~----~~~d-~ 91 (386)
T 1rrm_A 25 EVKRRGYQKALIVTDKTLVQC---GVVAKVTDKMDAAGLAWAIYDGVVPNPTI-----TVVKEGLGVFQN----SGAD-Y 91 (386)
T ss_dssp HHHHHTCCEEEEECBHHHHHT---THHHHHHHHHHHTTCEEEEECBCCSSCBH-----HHHHHHHHHHHH----HTCS-E
T ss_pred HHHHcCCCEEEEEECcchhhc---hHHHHHHHHHHHcCCeEEEECCccCCCCH-----HHHHHHHHHHHh----cCcC-E
Confidence 344456 45666654322111 13355566666654333344444445432 233455555432 2355 6
Q ss_pred EEeCCchhh--HHHHHHHHhcC----------------CCCCeEEEEeccC
Q 021235 225 VVACGSGGT--IAGLSLGSWLG----------------TLKAKVHAFSVCD 257 (315)
Q Consensus 225 vv~vGtGGt--~aGl~~~~k~~----------------~~~~rVigV~~~g 257 (315)
|+++|+|.. +++.+...... .+.++++.|...-
T Consensus 92 IIavGGGsv~D~aK~iA~~~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~ 142 (386)
T 1rrm_A 92 LIAIGGGSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTA 142 (386)
T ss_dssp EEEEESHHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSS
T ss_pred EEEeCChHHHHHHHHHHHHHhCCCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 778888765 34444443311 3467888888754
No 216
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=48.37 E-value=20 Score=32.88 Aligned_cols=49 Identities=6% Similarity=-0.000 Sum_probs=35.3
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ +|.-|++++..|+.+|.+.+++.+.. .+...++.+|++.+.
T Consensus 165 ~~VlV~Ga-~G~iG~~~~q~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~Ga~~~~ 213 (362)
T 2c0c_A 165 KKVLVTAA-AGGTGQFAMQLSKKAKCHVIGTCSSD-----------EKSAFLKSLGCDRPI 213 (362)
T ss_dssp CEEEETTT-TBTTHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHTTCSEEE
T ss_pred CEEEEeCC-CcHHHHHHHHHHHhCCCEEEEEECCH-----------HHHHHHHHcCCcEEE
Confidence 45665653 47789999999999999865554321 257778889998655
No 217
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=48.30 E-value=1.4e+02 Score=25.95 Aligned_cols=152 Identities=13% Similarity=0.056 Sum_probs=78.4
Q ss_pred HHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccC--------CCCC--ccch--HHHH-HhCCCE-
Q 021235 88 ADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVD--------QDPG--LIGN--LLVE-RLVGAH- 153 (315)
Q Consensus 88 ~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~--------~~p~--~~~n--~~~~-r~~GAe- 153 (315)
.+..+++++.||. ...+....+++-.+.+.+++.+.+......... ..+. ..+. ...+ +.+|.+
T Consensus 63 ~~l~~~~v~~iig--~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 140 (346)
T 1usg_A 63 NKIVNDGIKYVIG--HLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQR 140 (346)
T ss_dssp HHHHHTTCCEEEC--CSSHHHHHHHHHHHHHHTCEEEECCCCCGGGGSSCCSSEEECSCCGGGHHHHHHHHHHHTTCCSS
T ss_pred HHHHhCCCCEEEc--CCCcHHHHHHHHHHHHCCCeEEeeCCCChHHhcCCCCcEEeccCChHHHHHHHHHHHHHhcCCCe
Confidence 3344578888883 334556677788888999997665322110000 0011 0111 2223 345754
Q ss_pred EEEEcCC-cccccChHHHHHHHHHHHHHhCCCcE---EeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCC
Q 021235 154 IELISKE-EYSKIGSVTLTNILKEKLLKEGRRPY---VIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACG 229 (315)
Q Consensus 154 V~~v~~~-~~~~~~~~~~~~~~~~~l~~~~~~~y---~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vG 229 (315)
|.++... .|. ..+.+...+.+++.+.... .++.+..+. .....+|.+ .++|.||+..
T Consensus 141 i~~i~~~~~~~----~~~~~~~~~~l~~~g~~v~~~~~~~~~~~d~------~~~~~~l~~--------~~~d~i~~~~- 201 (346)
T 1usg_A 141 IAIIHDKQQYG----EGLARSVQDGLKAANANVVFFDGITAGEKDF------SALIARLKK--------ENIDFVYYGG- 201 (346)
T ss_dssp EEEEECSSHHH----HHHHHHHHHHHHHTTCCEEEEEECCTTCCCC------HHHHHHHHH--------TTCCEEEEES-
T ss_pred EEEEECCCchH----HHHHHHHHHHHHHcCCEEEEEeccCCCCcCH------HHHHHHHHh--------cCCCEEEEcC-
Confidence 5444332 221 1233444445555543321 222221111 122333322 2589988865
Q ss_pred chhhHHHHHHHHhcCCCCCeEEEEeccCCch
Q 021235 230 SGGTIAGLSLGSWLGTLKAKVHAFSVCDDPD 260 (315)
Q Consensus 230 tGGt~aGl~~~~k~~~~~~rVigV~~~g~~~ 260 (315)
.+..+.++.+.+++.+.+.++++.+...++.
T Consensus 202 ~~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ 232 (346)
T 1usg_A 202 YYPEMGQMLRQARSVGLKTQFMGPEGVGNAS 232 (346)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECGGGCCTT
T ss_pred cchHHHHHHHHHHHcCCCCeEEecCCCCcHH
Confidence 5667889999999988888888766554443
No 218
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=48.30 E-value=58 Score=30.16 Aligned_cols=99 Identities=14% Similarity=0.103 Sum_probs=50.3
Q ss_pred HHHhCC-CEEEEEcCCccccc--ChHHHHHHHHHHHHHhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCC
Q 021235 146 VERLVG-AHIELISKEEYSKI--GSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFD 222 (315)
Q Consensus 146 ~~r~~G-AeV~~v~~~~~~~~--~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D 222 (315)
.++.+| -++.+|.+....+. + ..+++.+.+.+.+-....++....||.- ....++.+++.+ ..+|
T Consensus 27 ~l~~~g~~~~livtd~~~~~~~~g---~~~~v~~~L~~~g~~~~~~~~~~~~p~~-----~~v~~~~~~~~~----~~~d 94 (387)
T 3bfj_A 27 RCQLLGGKKALLVTDKGLRAIKDG---AVDKTLHYLREAGIEVAIFDGVEPNPKD-----TNVRDGLAVFRR----EQCD 94 (387)
T ss_dssp HHHHTTCSEEEEECCTTTC--CCS---SHHHHHHHHHHTTCEEEEECCCCSSCBH-----HHHHHHHHHHHH----TTCC
T ss_pred HHHHcCCCEEEEEECcchhhccch---HHHHHHHHHHHcCCeEEEECCccCCCCH-----HHHHHHHHHHHh----cCCC
Confidence 345566 45666654322111 1 2345555666655333344544455532 234455555543 2465
Q ss_pred eEEEeCCchhh--HHHHHHHHh---------c-----CCCCCeEEEEeccC
Q 021235 223 DIVVACGSGGT--IAGLSLGSW---------L-----GTLKAKVHAFSVCD 257 (315)
Q Consensus 223 ~ivv~vGtGGt--~aGl~~~~k---------~-----~~~~~rVigV~~~g 257 (315)
+|+++|+|.. +++.+.... . ..+.++++.|...-
T Consensus 95 -~IIavGGGsv~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~ 144 (387)
T 3bfj_A 95 -IIVTVGGGSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTA 144 (387)
T ss_dssp -EEEEEESHHHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECST
T ss_pred -EEEEeCCcchhhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 6778888765 344444431 0 01467888888764
No 219
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=47.62 E-value=39 Score=28.28 Aligned_cols=58 Identities=12% Similarity=0.085 Sum_probs=41.4
Q ss_pred HHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHHHHHHHHh
Q 021235 206 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLD 271 (315)
Q Consensus 206 ~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~~i~~l~~ 271 (315)
.|+.++..+ ...+.|++..|.-+.+.|+..++- ...||||.+.............+++
T Consensus 57 ~~~~~~a~~----~g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~dsLlS~vq 114 (174)
T 3kuu_A 57 FSFAEQAEA----NGLHVIIAGNGGAAHLPGMLAAKT----LVPVLGVPVQSAALSGVDSLYSIVQ 114 (174)
T ss_dssp HHHHHHTTT----TTCSEEEEEEESSCCHHHHHHHTC----SSCEEEEEECCTTTTTHHHHHHHHT
T ss_pred HHHHHHHHh----CCCcEEEEECChhhhhHHHHHhcc----CCCEEEeeCCCCCCCCHHHHHHhhh
Confidence 455555432 347899999999999999999864 5799999998655444454555554
No 220
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=47.46 E-value=41 Score=30.71 Aligned_cols=49 Identities=10% Similarity=0.087 Sum_probs=34.3
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..| + |--|++++..|+.+|.+-++.+..+. .+..+++.+||+.++
T Consensus 194 ~~VlV~G-a-G~vG~~a~qla~~~Ga~~Vi~~~~~~----------~~~~~~~~lGa~~vi 242 (374)
T 1cdo_A 194 STCAVFG-L-GAVGLAAVMGCHSAGAKRIIAVDLNP----------DKFEKAKVFGATDFV 242 (374)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHTTCSEEEEECSCG----------GGHHHHHHTTCCEEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHcCCCEEEEEcCCH----------HHHHHHHHhCCceEE
Confidence 4565565 3 78999999999999995444443221 257788999997554
No 221
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=47.37 E-value=1e+02 Score=26.29 Aligned_cols=32 Identities=16% Similarity=0.187 Sum_probs=22.7
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
+++..|++ |--|.++|....+.|.+++++-+.
T Consensus 12 ~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~ 43 (262)
T 3pk0_A 12 SVVVTGGT-KGIGRGIATVFARAGANVAVAGRS 43 (262)
T ss_dssp EEEETTCS-SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34434544 678999999988999987776543
No 222
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=47.24 E-value=50 Score=27.38 Aligned_cols=58 Identities=10% Similarity=0.097 Sum_probs=39.9
Q ss_pred HHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHHHHHHHHh
Q 021235 206 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLD 271 (315)
Q Consensus 206 ~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~~i~~l~~ 271 (315)
.|+.++..+ ...+.|++..|.-+.+.|+..++- ...||||.+..+..........+++
T Consensus 50 ~~~~~~~~~----~g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~dsLlS~vq 107 (166)
T 3oow_A 50 FDYAETAKE----RGLKVIIAGAGGAAHLPGMVAAKT----TLPVLGVPVKSSTLNGQDSLLSIVQ 107 (166)
T ss_dssp HHHHHHTTT----TTCCEEEEEECSSCCHHHHHHHTC----SSCEEEEECCCTTTTTHHHHHHHHT
T ss_pred HHHHHHHHh----CCCcEEEEECCcchhhHHHHHhcc----CCCEEEeecCcCCCCCHHHHHHHhc
Confidence 345555432 347999999999999999999864 5799999987654333344444443
No 223
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=47.16 E-value=45 Score=27.59 Aligned_cols=58 Identities=9% Similarity=0.093 Sum_probs=41.1
Q ss_pred HHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHHHHHHHHh
Q 021235 206 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLD 271 (315)
Q Consensus 206 ~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~~i~~l~~ 271 (315)
.|+.++..+ ...+.|++..|.-+.+.|+..++- ...||||.+.............+++
T Consensus 48 ~~~~~~a~~----~g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~dsLlS~vq 105 (163)
T 3ors_A 48 VQFASEARE----RGINIIIAGAGGAAHLPGMVASLT----TLPVIGVPIETKSLKGIDSLLSIVQ 105 (163)
T ss_dssp HHHHHHTTT----TTCCEEEEEEESSCCHHHHHHHHC----SSCEEEEEECCTTTTTHHHHHHHHT
T ss_pred HHHHHHHHh----CCCcEEEEECCchhhhHHHHHhcc----CCCEEEeeCCCCCCCCHHHHHHHhh
Confidence 455555432 347899999999999999999874 5799999987654334444555554
No 224
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=47.16 E-value=1.3e+02 Score=25.43 Aligned_cols=36 Identities=11% Similarity=0.081 Sum_probs=29.0
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCCC-CCeEEEEecc
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGTL-KAKVHAFSVC 256 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~~-~~rVigV~~~ 256 (315)
.++|+||+. +..++.|+..++++.+. ++.|+|++-.
T Consensus 194 ~~~~ai~~~--~d~~a~g~~~al~~~g~~di~vig~d~~ 230 (293)
T 3l6u_A 194 IPFDAVYCH--NDDIAMGVLEALKKAKISGKIVVGIDGN 230 (293)
T ss_dssp CCCSEEEES--SHHHHHHHHHHHHHTTCCCCEEEEEECC
T ss_pred CCCCEEEEC--CchHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 468999875 66778899999998876 8888888754
No 225
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=47.05 E-value=35 Score=28.39 Aligned_cols=48 Identities=13% Similarity=0.013 Sum_probs=36.4
Q ss_pred CCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHHHHHHHHh
Q 021235 220 KFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLD 271 (315)
Q Consensus 220 ~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~~i~~l~~ 271 (315)
.++.|++..|.-+.+.|+..++- ...||||.+.++..........+++
T Consensus 61 g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~dsLlS~vq 108 (169)
T 3trh_A 61 GCAVFIAAAGLAAHLAGTIAAHT----LKPVIGVPMAGGSLGGLDALLSTVQ 108 (169)
T ss_dssp TEEEEEEEECSSCCHHHHHHHTC----SSCEEEEECCCSTTTTHHHHHHHHC
T ss_pred CCcEEEEECChhhhhHHHHHhcC----CCCEEEeecCCCCCCCHHHHHHhhc
Confidence 47899999999999999999864 5799999998655444444554553
No 226
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=46.91 E-value=1.2e+02 Score=25.71 Aligned_cols=34 Identities=3% Similarity=-0.007 Sum_probs=24.4
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCC
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 130 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~ 130 (315)
++++..|+ +|--|.++|..-.+.|.+++++....
T Consensus 8 k~vlVTGa-s~gIG~~~a~~l~~~G~~v~~~~~~~ 41 (264)
T 3i4f_A 8 RHALITAG-TKGLGKQVTEKLLAKGYSVTVTYHSD 41 (264)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCC-CchhHHHHHHHHHHCCCEEEEEcCCC
Confidence 34444454 46788999998889999988876543
No 227
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=46.78 E-value=28 Score=31.67 Aligned_cols=49 Identities=18% Similarity=0.119 Sum_probs=34.8
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ +|.-|++++..|+.+|.+++++.+.. .+...++.+|++.+.
T Consensus 172 ~~vlV~Ga-sggiG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~ga~~~~ 220 (351)
T 1yb5_A 172 ESVLVHGA-SGGVGLAACQIARAYGLKILGTAGTE-----------EGQKIVLQNGAHEVF 220 (351)
T ss_dssp CEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHTTCSEEE
T ss_pred CEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCh-----------hHHHHHHHcCCCEEE
Confidence 45555554 47899999999999999866554321 256678889997554
No 228
>2b34_A F35G2.2, MAR1 ribonuclease; isochorismatase family, structural genomics, PSI, protein structure initiative; 2.14A {Caenorhabditis elegans}
Probab=46.51 E-value=15 Score=30.97 Aligned_cols=59 Identities=10% Similarity=0.077 Sum_probs=39.8
Q ss_pred CCEEEecCCchhHHH-HHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 95 ADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 95 ~~~vVt~g~s~GNhg-~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
.++||.+|- ..|.| .++|.-|..+|++++++.+.......+ .+...+..++..|++|+.
T Consensus 101 i~~lvi~G~-~T~~CV~~Ta~da~~~Gy~V~vv~Da~as~~~~--~h~~al~~m~~~g~~v~~ 160 (199)
T 2b34_A 101 VQNVILVGI-EAHVCVLQTTYDLLERGLNVHVVVDAVSSRSHT--DRHFAFKQMEQAGAILTT 160 (199)
T ss_dssp CSEEEEEEE-CTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--HHHHHHHHHHHHTCEEEC
T ss_pred CCEEEEEEE-ecCHHHHHHHHHHHHCCCEEEEeCcccCCCCHH--HHHHHHHHHHHCCCEEec
Confidence 888888764 45555 578888999999999998765432111 112346667778888763
No 229
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=46.34 E-value=41 Score=30.67 Aligned_cols=49 Identities=12% Similarity=0.093 Sum_probs=34.2
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..| + |.-|++++..|+.+|.+-++.+.... .+...++.+||+.++
T Consensus 193 ~~VlV~G-a-G~vG~~a~qla~~~Ga~~Vi~~~~~~----------~~~~~~~~lGa~~vi 241 (374)
T 2jhf_A 193 STCAVFG-L-GGVGLSVIMGCKAAGAARIIGVDINK----------DKFAKAKEVGATECV 241 (374)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHTTCSEEEEECSCG----------GGHHHHHHTTCSEEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHcCCCeEEEEcCCH----------HHHHHHHHhCCceEe
Confidence 4565565 3 78999999999999995444443222 257788999997544
No 230
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=46.17 E-value=1.5e+02 Score=25.93 Aligned_cols=147 Identities=14% Similarity=0.094 Sum_probs=76.9
Q ss_pred HHHHHH-cCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCC-------CCc----cchHHHHHhCCCE-
Q 021235 87 MADAVA-QGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQD-------PGL----IGNLLVERLVGAH- 153 (315)
Q Consensus 87 l~~a~~-~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~-------p~~----~~n~~~~r~~GAe- 153 (315)
+.+..+ .+++.|| |..++....+++-.+...+++++.+........... +.. ..-...+..+|.+
T Consensus 64 ~~~li~~~~v~~ii--G~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 141 (368)
T 4eyg_A 64 AQELIVNDKVNVIA--GFGITPAALAAAPLATQAKVPEIVMAAGTSIITERSPYIVRTSFTLAQSSIIIGDWAAKNGIKK 141 (368)
T ss_dssp HHHHHHTSCCSEEE--ECSSHHHHHHHHHHHHHHTCCEEESSCCCGGGGGGCTTEEESSCCHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHhcCCcEEEE--CCCccHHHHHHHHHHHhCCceEEeccCCChhhccCCCCEEEecCChHHHHHHHHHHHHHcCCCE
Confidence 344444 6788888 334467788889999999999876542211100000 110 0113344456754
Q ss_pred EEEEcC-CcccccChHHHHHHHHHHHHHhCCCc---EEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCC
Q 021235 154 IELISK-EEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACG 229 (315)
Q Consensus 154 V~~v~~-~~~~~~~~~~~~~~~~~~l~~~~~~~---y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vG 229 (315)
|.++.. ..|. ....+...+.+++.+... ..++.+..+ +.....+|.+ ..+|.||+...
T Consensus 142 ia~i~~~~~~g----~~~~~~~~~~l~~~g~~v~~~~~~~~~~~d------~~~~~~~l~~--------~~~d~v~~~~~ 203 (368)
T 4eyg_A 142 VATLTSDYAPG----NDALAFFKERFTAGGGEIVEEIKVPLANPD------FAPFLQRMKD--------AKPDAMFVFVP 203 (368)
T ss_dssp EEEEEESSHHH----HHHHHHHHHHHHHTTCEEEEEEEECSSSCC------CHHHHHHHHH--------HCCSEEEEECC
T ss_pred EEEEecCchHh----HHHHHHHHHHHHHcCCEEEEEEeCCCCCCc------HHHHHHHHHh--------cCCCEEEEecc
Confidence 544432 1221 122344445555554321 122332222 1123333432 24899998544
Q ss_pred chhhHHHHHHHHhcCCCC---CeEEEEe
Q 021235 230 SGGTIAGLSLGSWLGTLK---AKVHAFS 254 (315)
Q Consensus 230 tGGt~aGl~~~~k~~~~~---~rVigV~ 254 (315)
+..+.++...+++.+.. +.+++..
T Consensus 204 -~~~a~~~~~~~~~~g~~~~~v~~~~~~ 230 (368)
T 4eyg_A 204 -AGQGGNFMKQFAERGLDKSGIKVIGPG 230 (368)
T ss_dssp -TTCHHHHHHHHHHTTGGGTTCEEEEET
T ss_pred -chHHHHHHHHHHHcCCCcCCceEEecC
Confidence 34888999999987754 6788765
No 231
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=46.11 E-value=1.6e+02 Score=26.00 Aligned_cols=154 Identities=12% Similarity=0.012 Sum_probs=76.8
Q ss_pred HHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHc-CCeEEEEecCCC--cccC-CCCC-ccc-hH-----HHHHhCCC--
Q 021235 86 LMADAVAQGADCIITIGGIQSNHCRAAAVAAKYL-NLDCYLILRTSK--VLVD-QDPG-LIG-NL-----LVERLVGA-- 152 (315)
Q Consensus 86 ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~l-Gl~~~ivvp~~~--~~~~-~~p~-~~~-n~-----~~~r~~GA-- 152 (315)
.+....+++++.||..+.... -++..+++.+ +++++++-.... +... -... ..+ .+ ..+-..|.
T Consensus 54 ~l~~l~~~~~dgIi~~~~~~~---~~~~~~a~~~p~~p~v~id~~~~~~~~~~~v~~d~~~~~~lag~~a~~l~~~Gh~r 130 (318)
T 2fqx_A 54 SLSAFADENMGLVVACGSFLV---EAVIETSARFPKQKFLVIDAVVQDRDNVVSAVFGQNEGSFLVGVAAALKAKEAGKS 130 (318)
T ss_dssp HHHHHHHTTCSEEEEESTTTH---HHHHHHHHHCTTSCEEEESSCCCSCTTEEEEEECHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCCEEEECChhHH---HHHHHHHHHCCCCEEEEEcCccCCCCCEEEEEechHHHHHHHHHHHHHHhccCCCc
Confidence 466667789999987643222 2344445553 888877643211 1000 0000 011 11 12334575
Q ss_pred EEEEEcCCcccccChHHHHHHHHHHHHHhCCCc--EEeCCCC-CchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCC
Q 021235 153 HIELISKEEYSKIGSVTLTNILKEKLLKEGRRP--YVIPVGG-SNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACG 229 (315)
Q Consensus 153 eV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~--y~ip~g~-~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vG 229 (315)
+|-++...... ...++..-..+.+++.++.. .++-.+. .++. .|+ ..+.++.++ .+|+||+..+
T Consensus 131 ~Ig~i~g~~~~--~~~~r~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~--~g~-~~a~~ll~~--------~~daI~~~~d 197 (318)
T 2fqx_A 131 AVGFIVGMELG--MMPLFEAGFEAGVKAVDPDIQVVVEVANTFSDPQ--KGQ-ALAAKLYDS--------GVNVIFQVAG 197 (318)
T ss_dssp EEEEEESCCST--TTHHHHHHHHHHHHHHCTTCEEEEEECSCSSCHH--HHH-HHHHHHHHT--------TCCEEEEECG
T ss_pred EEEEEeCcccH--HHHHHHHHHHHHHHHHCCCCEEEEEEccCccCHH--HHH-HHHHHHHHC--------CCcEEEECCC
Confidence 88777643221 11233343444455545432 2221221 2222 243 244444432 3899987654
Q ss_pred chhhHHHHHHHHhcCC---CCCeEEEEeccC
Q 021235 230 SGGTIAGLSLGSWLGT---LKAKVHAFSVCD 257 (315)
Q Consensus 230 tGGt~aGl~~~~k~~~---~~~rVigV~~~g 257 (315)
.+..|+..++++.+ .++.|+|++-..
T Consensus 198 --~~a~Gv~~a~~e~g~~P~dv~viG~D~~~ 226 (318)
T 2fqx_A 198 --GTGNGVIKEARDRRLNGQDVWVIGVDRDQ 226 (318)
T ss_dssp --GGHHHHHHHHHHHHHTTCCCEEEEEESCC
T ss_pred --CCchHHHHHHHhhhhccCCcEEEEEecch
Confidence 56778888887632 468999998754
No 232
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=46.09 E-value=28 Score=31.45 Aligned_cols=48 Identities=21% Similarity=0.033 Sum_probs=33.6
Q ss_pred CEEEecCCchhHHHHHHHHHHHHc--CCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYL--NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~l--Gl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ |.-|++++..|+.+ |.+.+++.+ + ..+...++.+||+.++
T Consensus 172 ~~VlV~Ga--G~vG~~aiqlak~~~~Ga~Vi~~~~-~----------~~~~~~~~~lGa~~vi 221 (344)
T 2h6e_A 172 PVVIVNGI--GGLAVYTIQILKALMKNITIVGISR-S----------KKHRDFALELGADYVS 221 (344)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHCTTCEEEEECS-C----------HHHHHHHHHHTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHhcCCCEEEEEeC-C----------HHHHHHHHHhCCCEEe
Confidence 45655665 68899999999999 998444322 2 1357788889997544
No 233
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=45.98 E-value=27 Score=31.58 Aligned_cols=49 Identities=12% Similarity=0.101 Sum_probs=33.7
Q ss_pred CEEEecCCchhHHHHHHHHHHHHc-CCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYL-NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~l-Gl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ +|.-|++++..++.+ |.+.+++.+.. .+...++.+|++.+.
T Consensus 172 ~~vlV~Ga-gg~iG~~~~~~a~~~~Ga~Vi~~~~~~-----------~~~~~~~~~g~~~~~ 221 (347)
T 1jvb_A 172 KTLLVVGA-GGGLGTMAVQIAKAVSGATIIGVDVRE-----------EAVEAAKRAGADYVI 221 (347)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHHTCCEEEEEESSH-----------HHHHHHHHHTCSEEE
T ss_pred CEEEEECC-CccHHHHHHHHHHHcCCCeEEEEcCCH-----------HHHHHHHHhCCCEEe
Confidence 45555554 468999999999999 99855543321 246677888987654
No 234
>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.70A {Vibrio fischeri} SCOP: c.124.1.0
Probab=45.83 E-value=91 Score=27.39 Aligned_cols=51 Identities=16% Similarity=0.120 Sum_probs=31.5
Q ss_pred EEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCc-----h-hhHHHHHHHHhhhcC
Q 021235 224 IVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP-----D-YFYDYTQGLLDGLNA 275 (315)
Q Consensus 224 ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~-----~-~~~~~i~~l~~g~~~ 275 (315)
-++++++|.|+..++..+.... ...+.-|+..|.. . +...-..++++.++.
T Consensus 57 ~vIGv~wG~Tl~~v~~~l~~~~-~~~~~~V~l~GG~~~~~~~~~~~~i~~~lA~~~~~ 113 (267)
T 3kv1_A 57 MAVAVGQGQNVAAVADHAGIVT-QRNARFVSAIGGTHRSGDIINADHICRRLAKKYGG 113 (267)
T ss_dssp CEEEECCSHHHHHHHHCCCCCC-CCCCEEEESBCBCC----CCCHHHHHHHHHHHHTC
T ss_pred CEEEECchHHHHHHHHhccccC-CCCCEEEeCCCCCCCCccccCHHHHHHHHHHHhCC
Confidence 4789999999999998875432 2234445665532 1 223334567777775
No 235
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=45.78 E-value=47 Score=30.29 Aligned_cols=48 Identities=19% Similarity=0.032 Sum_probs=32.8
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHH-hCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVER-LVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r-~~GAeV~~ 156 (315)
++|+..|+ |--|++++..|+.+|.+.+++.+.. .+...++ .+||+.+.
T Consensus 189 ~~VlV~Ga--G~vG~~~~q~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~lGa~~v~ 237 (366)
T 1yqd_A 189 KHIGIVGL--GGLGHVAVKFAKAFGSKVTVISTSP-----------SKKEEALKNFGADSFL 237 (366)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCG-----------GGHHHHHHTSCCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHhcCCceEE
Confidence 45555553 7899999999999999765554332 1355555 89997554
No 236
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=45.77 E-value=25 Score=32.05 Aligned_cols=49 Identities=16% Similarity=0.137 Sum_probs=34.7
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ +|.-|++++..|+..|.+++++.+.. .+...++.+|++.+.
T Consensus 164 ~~vlV~Ga-~ggiG~~~~~~a~~~Ga~Vi~~~~~~-----------~~~~~~~~~g~~~~~ 212 (354)
T 2j8z_A 164 DYVLIHAG-LSGVGTAAIQLTRMAGAIPLVTAGSQ-----------KKLQMAEKLGAAAGF 212 (354)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCH-----------HHHHHHHHHTCSEEE
T ss_pred CEEEEECC-ccHHHHHHHHHHHHcCCEEEEEeCCH-----------HHHHHHHHcCCcEEE
Confidence 45655554 47899999999999999866654321 246667888997554
No 237
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=45.76 E-value=23 Score=32.09 Aligned_cols=46 Identities=17% Similarity=0.146 Sum_probs=34.7
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHI 154 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV 154 (315)
++|+..|+ +|.-|++++..|+.+|.+++++ ... .++..++.+|++.
T Consensus 152 ~~VlV~Ga-~g~iG~~~~q~a~~~Ga~Vi~~-~~~-----------~~~~~~~~lGa~~ 197 (343)
T 3gaz_A 152 QTVLIQGG-GGGVGHVAIQIALARGARVFAT-ARG-----------SDLEYVRDLGATP 197 (343)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEE-ECH-----------HHHHHHHHHTSEE
T ss_pred CEEEEecC-CCHHHHHHHHHHHHCCCEEEEE-eCH-----------HHHHHHHHcCCCE
Confidence 45655553 3789999999999999986665 321 2577889999998
No 238
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=45.58 E-value=31 Score=31.04 Aligned_cols=49 Identities=6% Similarity=-0.031 Sum_probs=34.0
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHH-hCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVER-LVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r-~~GAeV~~ 156 (315)
++|+..|+ +|.-|++++..|+.+|.+.+++.+.. .+...++ .+|++.+.
T Consensus 157 ~~vlI~Ga-~g~iG~~~~~~a~~~G~~V~~~~~~~-----------~~~~~~~~~~g~~~~~ 206 (345)
T 2j3h_A 157 ETVYVSAA-SGAVGQLVGQLAKMMGCYVVGSAGSK-----------EKVDLLKTKFGFDDAF 206 (345)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHTSCCSEEE
T ss_pred CEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHHcCCceEE
Confidence 45655554 47899999999999999755554321 2566776 79997544
No 239
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=45.54 E-value=1e+02 Score=26.77 Aligned_cols=31 Identities=19% Similarity=0.137 Sum_probs=21.1
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
..|| .|++ |--|.++|..-.+.|.+++++-+
T Consensus 35 ~~lV-TGas-~GIG~aia~~la~~G~~V~~~~r 65 (281)
T 4dry_A 35 IALV-TGGG-TGVGRGIAQALSAEGYSVVITGR 65 (281)
T ss_dssp EEEE-TTTT-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEE-eCCC-CHHHHHHHHHHHHCCCEEEEEEC
Confidence 3345 4543 67888888888888888666543
No 240
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=45.42 E-value=1.2e+02 Score=25.77 Aligned_cols=30 Identities=23% Similarity=0.223 Sum_probs=22.4
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
.||| |+ +|.-|.++|..-.+.|.+++++.+
T Consensus 10 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 39 (262)
T 1zem_A 10 CLVT-GA-GGNIGLATALRLAEEGTAIALLDM 39 (262)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3454 54 468999999999999998777654
No 241
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=45.39 E-value=83 Score=27.84 Aligned_cols=32 Identities=22% Similarity=0.073 Sum_probs=23.4
Q ss_pred CCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 94 GADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 94 G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
|...||| |++ +--|+++|..-++.|.++++.-
T Consensus 29 gKvalVT-Gas-~GIG~aiA~~la~~Ga~V~i~~ 60 (273)
T 4fgs_A 29 AKIAVIT-GAT-SGIGLAAAKRFVAEGARVFITG 60 (273)
T ss_dssp TCEEEEE-SCS-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEe-CcC-CHHHHHHHHHHHHCCCEEEEEE
Confidence 4444565 544 5789999999999999876653
No 242
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=45.38 E-value=1.4e+02 Score=25.24 Aligned_cols=29 Identities=17% Similarity=0.134 Sum_probs=21.9
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
||| |+ +|--|+++|....+.|.+++++.+
T Consensus 6 lVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 34 (258)
T 3a28_C 6 MVT-GG-AQGIGRGISEKLAADGFDIAVADL 34 (258)
T ss_dssp EEE-TT-TSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred EEe-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 454 54 478899999998889998777644
No 243
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=45.38 E-value=41 Score=31.00 Aligned_cols=56 Identities=14% Similarity=0.041 Sum_probs=33.8
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccch--HHHHHhCCCEEEEEcC
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGN--LLVERLVGAHIELISK 159 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n--~~~~r~~GAeV~~v~~ 159 (315)
++|+|.+.| ....++-..|.+.|.++.+++.++.|. ..|. ...+...|-.+.++.+
T Consensus 143 ~~ILTh~~S--~tvl~~l~~A~~~gk~~~V~v~EtRP~------~qGrltA~eL~~~GI~vtlI~D 200 (338)
T 3a11_A 143 DVIMTHCHS--KAAISVMKTAWEQGKDIKVIVTETRPK------WQGKITAKELASYGIPVIYVVD 200 (338)
T ss_dssp CEEEECSCC--HHHHHHHHHHHHTTCCCEEEEECCTTT------THHHHHHHHHHHTTCCEEEECG
T ss_pred CEEEEeCCc--HHHHHHHHHHHHCCCeEEEEEeCCCCc------hhhHHHHHHHHhCCCCEEEEeh
Confidence 467776542 344455555667788888888777653 2342 2334456777777765
No 244
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=45.29 E-value=1.4e+02 Score=27.79 Aligned_cols=99 Identities=14% Similarity=0.105 Sum_probs=49.0
Q ss_pred HHHhCC-CEEEEEcC-CcccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCe
Q 021235 146 VERLVG-AHIELISK-EEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 223 (315)
Q Consensus 146 ~~r~~G-AeV~~v~~-~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ 223 (315)
.++.+| -++.+|.+ ..+...+ ..+++.+.+.+.+-....++..-.||.- ....++.+++.+ ..+|
T Consensus 37 ~l~~~g~~r~liVtd~~~~~~~g---~~~~v~~~L~~~g~~~~~f~~v~~~p~~-----~~v~~~~~~~~~----~~~D- 103 (407)
T 1vlj_A 37 EIKNAGIRKVLFLYGGGSIKKNG---VYDQVVDSLKKHGIEWVEVSGVKPNPVL-----SKVHEAVEVAKK----EKVE- 103 (407)
T ss_dssp HHHHTTCCEEEEEECSSHHHHSS---HHHHHHHHHHHTTCEEEEECCCCSSCBH-----HHHHHHHHHHHH----TTCS-
T ss_pred HHHHcCCCeEEEEECchHHhhcc---HHHHHHHHHHHcCCeEEEecCccCCCCH-----HHHHHHHHHHHh----cCCC-
Confidence 445567 45655543 2222111 2355555666554333334333345432 233455555543 2465
Q ss_pred EEEeCCchhh--HHHHHHHHhc--------------CCCCCeEEEEeccC
Q 021235 224 IVVACGSGGT--IAGLSLGSWL--------------GTLKAKVHAFSVCD 257 (315)
Q Consensus 224 ivv~vGtGGt--~aGl~~~~k~--------------~~~~~rVigV~~~g 257 (315)
+|+++|+|.. +++.+..... ..+.++++.|...-
T Consensus 104 ~IIavGGGsviD~AK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTa 153 (407)
T 1vlj_A 104 AVLGVGGGSVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTIS 153 (407)
T ss_dssp EEEEEESHHHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSC
T ss_pred EEEEeCChhHHHHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 6678888765 3444433310 02567888888763
No 245
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=45.06 E-value=1.5e+02 Score=25.38 Aligned_cols=32 Identities=25% Similarity=0.125 Sum_probs=23.6
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
..||| |++ |--|.++|..-.+.|.+++++-..
T Consensus 15 ~vlVT-Gas-~gIG~~ia~~l~~~G~~V~~~~r~ 46 (278)
T 3sx2_A 15 VAFIT-GAA-RGQGRAHAVRLAADGADIIAVDLC 46 (278)
T ss_dssp EEEEE-STT-SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred EEEEE-CCC-ChHHHHHHHHHHHCCCeEEEEecc
Confidence 34554 543 678999999999999998777543
No 246
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=45.05 E-value=1.3e+02 Score=25.35 Aligned_cols=29 Identities=14% Similarity=0.070 Sum_probs=21.8
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
+|| |+ +|.-|+++|..-.+.|.+++++.+
T Consensus 6 lVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 34 (256)
T 1geg_A 6 LVT-GA-GQGIGKAIALRLVKDGFAVAIADY 34 (256)
T ss_dssp EEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEE-CC-CChHHHHHHHHHHHCCCEEEEEeC
Confidence 454 54 467899999999999988776654
No 247
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=45.03 E-value=1.4e+02 Score=25.15 Aligned_cols=56 Identities=14% Similarity=0.032 Sum_probs=34.3
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 159 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~ 159 (315)
+++..|+ +|.-|.++|....+.|.+++++.+..... .......++..|.++..+..
T Consensus 23 ~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~------~~~~~~~l~~~~~~~~~~~~ 78 (274)
T 1ja9_A 23 VALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKA------AEEVVAELKKLGAQGVAIQA 78 (274)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHH------HHHHHHHHHHTTCCEEEEEC
T ss_pred EEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHH------HHHHHHHHHhcCCcEEEEEe
Confidence 4444454 47899999999999999987776532210 01112344556777766543
No 248
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=44.99 E-value=1.4e+02 Score=25.03 Aligned_cols=32 Identities=19% Similarity=0.076 Sum_probs=23.2
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
+++..|+ +|.-|.++|....+.|.+++++.+.
T Consensus 15 ~vlItGa-sggiG~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 15 VAIVTGG-AQNIGLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3443454 4789999999999999987776543
No 249
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=44.95 E-value=1.1e+02 Score=26.59 Aligned_cols=50 Identities=8% Similarity=-0.110 Sum_probs=31.5
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
+++..||+ +--|+++|..-++.|.++++.-. . ..+......-+.++..+.
T Consensus 4 ~vlVTGas-~GIG~aia~~la~~Ga~V~~~~~--~---------~~~~~~~~~~~~~~~~~~ 53 (247)
T 3ged_A 4 GVIVTGGG-HGIGKQICLDFLEAGDKVCFIDI--D---------EKRSADFAKERPNLFYFH 53 (247)
T ss_dssp EEEEESTT-SHHHHHHHHHHHHTTCEEEEEES--C---------HHHHHHHHTTCTTEEEEE
T ss_pred EEEEecCC-CHHHHHHHHHHHHCCCEEEEEeC--C---------HHHHHHHHHhcCCEEEEE
Confidence 34434544 67899999999999998776532 1 124455555566665554
No 250
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=44.93 E-value=1.6e+02 Score=25.86 Aligned_cols=156 Identities=8% Similarity=-0.024 Sum_probs=77.8
Q ss_pred HHHHHHH--cCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCccc------------------CCCCCccch--
Q 021235 86 LMADAVA--QGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLV------------------DQDPGLIGN-- 143 (315)
Q Consensus 86 ll~~a~~--~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~------------------~~~p~~~~n-- 143 (315)
.+..+++ ++++.||.... ......+...++..|++++++-....... ..+....+.
T Consensus 52 ~i~~~i~~~~~vDgiIi~~~--~~~~~~~~~~~~~~giPvV~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~D~~~~g~~a 129 (350)
T 3h75_A 52 QARELFQGRDKPDYLMLVNE--QYVAPQILRLSQGSGIKLFIVNSPLTLDQRELIGQSRQNYSDWIGSMVGDDEEAGYRM 129 (350)
T ss_dssp HHHHHHHSSSCCSEEEEECC--SSHHHHHHHHHTTSCCEEEEEESCCCTTTC------------CEEEEECCHHHHHHHH
T ss_pred HHHHHHhcCCCCCEEEEeCc--hhhHHHHHHHHHhCCCcEEEEcCCCChHHHhhhcCCchhccceeeeecCChHHHHHHH
Confidence 3555666 58999887642 23344555567778999888764322110 000000111
Q ss_pred HHHHHhCC--------CEEEEEcCCcccccChHHHHHHHHHHHHHhCCC-c-EEeCCCCCchhhHHHHHHHHHHHHHHHh
Q 021235 144 LLVERLVG--------AHIELISKEEYSKIGSVTLTNILKEKLLKEGRR-P-YVIPVGGSNSIGTWGYIEAIKEIEQQLQ 213 (315)
Q Consensus 144 ~~~~r~~G--------AeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~-~-y~ip~g~~n~~~~~G~~t~a~EI~~Q~~ 213 (315)
...+...| .+|.++.... ......++.+-..+.+++.+.. . ..+. +..+. ..++ ....+++++-
T Consensus 130 ~~~L~~~g~~~~~g~~~~i~~i~g~~-~~~~~~~R~~Gf~~~l~~~~~~~~~~~~~-~~~~~--~~~~-~~~~~~L~~~- 203 (350)
T 3h75_A 130 LKELLHKLGPVPAGHGIELLAFSGLK-VTPAAQLRERGLRRALAEHPQVHLRQLVY-GEWNR--ERAY-RQAQQLLKRY- 203 (350)
T ss_dssp HHHHHHHHCCCCSSCCEEEEEEESCT-TSHHHHHHHHHHHHHHHHCTTEEEEEEEE-CTTCH--HHHH-HHHHHHHHHC-
T ss_pred HHHHHHHhhhhcCCCCceEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCeEEEEEee-CCCcH--HHHH-HHHHHHHHhC-
Confidence 11122223 4676665321 1111122333344455554321 1 1121 11122 2333 2344444432
Q ss_pred cCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEecc
Q 021235 214 TGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVC 256 (315)
Q Consensus 214 ~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~~ 256 (315)
.++|+||+. +...+.|+..++++.+. ++.|+|++-.
T Consensus 204 -----~~~~aI~~~--~d~~a~g~~~al~~~G~~vP~di~vvg~d~~ 243 (350)
T 3h75_A 204 -----PKTQLVWSA--NDEMALGAMQAARELGRKPGTDLLFSGVNSS 243 (350)
T ss_dssp -----TTEEEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEEEESCC
T ss_pred -----CCcCEEEEC--ChHHHHHHHHHHHHcCCCCCCCeEEEecCCC
Confidence 357888764 56788899999998873 5888888743
No 251
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=44.76 E-value=1.5e+02 Score=25.35 Aligned_cols=200 Identities=13% Similarity=-0.001 Sum_probs=96.5
Q ss_pred HHHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCccc--CCCC----Cc--cch--H-HHHHhC--
Q 021235 84 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLV--DQDP----GL--IGN--L-LVERLV-- 150 (315)
Q Consensus 84 ~~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~--~~~p----~~--~~n--~-~~~r~~-- 150 (315)
...+..+++++++.||.... ..+........++..|++++.+-....... ...+ +. .+. . .+.+..
T Consensus 51 ~~~i~~l~~~~vdgiii~~~-~~~~~~~~~~~~~~~giPvV~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~g~~ 129 (297)
T 3rot_A 51 VQFIESALATYPSGIATTIP-SDTAFSKSLQRANKLNIPVIAVDTRPKDKTKNPYLVFLGSDNLLAGKKLGEKALELTPS 129 (297)
T ss_dssp HHHHHHHHHTCCSEEEECCC-CSSTTHHHHHHHHHHTCCEEEESCCCSCTTTSCCSCEEECCHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCCCEEEEeCC-CHHHHHHHHHHHHHCCCCEEEEcCCCccccccCcceEEccChHHHHHHHHHHHHHhcCC
Confidence 34466677888998886543 233334445566778999887753322100 0000 00 111 1 122333
Q ss_pred CCEEEEEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCc
Q 021235 151 GAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGS 230 (315)
Q Consensus 151 GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGt 230 (315)
.-++.++.... ......++.+-..+.+++.+-....+. ...+ ...++ ....++.++- .++|+||+. +
T Consensus 130 ~~~i~~i~g~~-~~~~~~~R~~Gf~~~l~~~g~~~~~~~-~~~~--~~~~~-~~~~~~l~~~------~~~~ai~~~--~ 196 (297)
T 3rot_A 130 AKRALVLNPQP-GHIGLEKRAYGIKTILQDKGIFFEELD-VGTD--PNQVQ-SRVKSYFKIH------PETNIIFCL--T 196 (297)
T ss_dssp CCEEEEEESCT-TCHHHHHHHHHHHHHHHHTTCEEEEEE-CCSC--HHHHH-HHHHHHHHHC------TTCCEEEES--S
T ss_pred CceEEEEeCCC-CcHHHHHHHHHHHHHHHhcCCeEEEee-cCCC--hHHHH-HHHHHHHHhC------CCCCEEEEc--C
Confidence 24566664321 110112233444455555432222222 1112 22233 3444544432 468999874 4
Q ss_pred hhhHHHHHHHHhcCC-----CCCeEEEEeccCCchhhHHHHHHHHhhhcCCCCCCCeEEecCCcccchHHHHHHHHHhcC
Q 021235 231 GGTIAGLSLGSWLGT-----LKAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVDSRDIVNIQNVSVYMTFKNILMNILMNG 305 (315)
Q Consensus 231 GGt~aGl~~~~k~~~-----~~~rVigV~~~g~~~~~~~~i~~l~~g~~~~~~~~dvv~v~e~~~~~~~~~~~~~~~~~~ 305 (315)
..++.|+..++++.+ .++.|+|++-... . ...+..+- ..-.|..+-........++|.+.+-++
T Consensus 197 d~~A~g~~~al~~~g~~vP~~dv~vig~D~~~~---~---~~~i~~~~-----~lttv~~~~~~~g~~av~~l~~~i~g~ 265 (297)
T 3rot_A 197 SQALDPLGQMLLHPDRYDFNYQPQVYSFDKTPN---T---VSLIHKKL-----VNYVMDQQPFLMGYLSITQLVLMNRYQ 265 (297)
T ss_dssp HHHHHHHHHHHHSHHHHTCCCCCEEEEECCCHH---H---HHHHHTTS-----CCEEECCCHHHHHHHHHHHHHHHHHHC
T ss_pred CcchHHHHHHHHhcCCccCCCceEEEEeCCCHH---H---HHHHHcCC-----ceEEEecChHHHHHHHHHHHHHHHhCC
Confidence 678889999999875 3789999865421 1 11112111 111222222344445566777776666
Q ss_pred CCC
Q 021235 306 KQP 308 (315)
Q Consensus 306 ~~~ 308 (315)
+.|
T Consensus 266 ~~~ 268 (297)
T 3rot_A 266 LNP 268 (297)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 252
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=44.69 E-value=30 Score=27.95 Aligned_cols=29 Identities=10% Similarity=-0.096 Sum_probs=23.2
Q ss_pred EEEecCCchhHHHHHHHHHHHHc-CCeEEEEe
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYL-NLDCYLIL 127 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~l-Gl~~~ivv 127 (315)
+|+.+|. |..|..+|...+.. |++++++-
T Consensus 41 ~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid 70 (183)
T 3c85_A 41 QVLILGM--GRIGTGAYDELRARYGKISLGIE 70 (183)
T ss_dssp SEEEECC--SHHHHHHHHHHHHHHCSCEEEEE
T ss_pred cEEEECC--CHHHHHHHHHHHhccCCeEEEEE
Confidence 4655664 89999999999888 99877763
No 253
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=44.26 E-value=40 Score=30.72 Aligned_cols=57 Identities=12% Similarity=0.094 Sum_probs=38.1
Q ss_pred EEEecCC-chhHHHHHHHHHHHHc-CCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcC
Q 021235 97 CIITIGG-IQSNHCRAAAVAAKYL-NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 159 (315)
Q Consensus 97 ~vVt~g~-s~GNhg~alA~aa~~l-Gl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~ 159 (315)
+|..+|- ..+|.+++++.+++++ |++++++.|+.-.. | ..-+..++..|+++....+
T Consensus 153 kva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~----~--~~~~~~~~~~g~~~~~~~d 211 (306)
T 4ekn_B 153 KIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRL----P--KDIIEDLKAKNIKFYEKES 211 (306)
T ss_dssp EEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCC----C--HHHHHHHHHTTCCEEEESC
T ss_pred EEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCccccc----C--HHHHHHHHHcCCEEEEEcC
Confidence 4544453 3479999999999999 99999998875311 1 1123445667887766543
No 254
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=43.97 E-value=1.3e+02 Score=25.78 Aligned_cols=30 Identities=20% Similarity=0.195 Sum_probs=22.5
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
.||| |+ +|.-|+++|....+.|.+++++.+
T Consensus 25 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 54 (277)
T 2rhc_B 25 ALVT-GA-TSGIGLEIARRLGKEGLRVFVCAR 54 (277)
T ss_dssp EEEE-TC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 3454 54 478899999999999998777654
No 255
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=43.88 E-value=23 Score=32.25 Aligned_cols=31 Identities=23% Similarity=0.248 Sum_probs=24.6
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
++|...|| |-.|+.+|.+|+++|++++++-+
T Consensus 2 K~I~ilGg--g~~g~~~~~~Ak~~G~~vv~vd~ 32 (363)
T 4ffl_A 2 KTICLVGG--KLQGFEAAYLSKKAGMKVVLVDK 32 (363)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEEeC
Confidence 35555666 56899999999999999998854
No 256
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=43.73 E-value=70 Score=29.12 Aligned_cols=77 Identities=14% Similarity=0.071 Sum_probs=0.0
Q ss_pred HHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCe
Q 021235 144 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 223 (315)
Q Consensus 144 ~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ 223 (315)
...+...|++|+.+.+..-........++.+++++.+.+.+..++..+-.++....- +..++.++. +.+|.
T Consensus 62 a~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~---~~~~~~~~~------g~iDi 132 (346)
T 3kvo_A 62 ALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISA---AVEKAIKKF------GGIDI 132 (346)
T ss_dssp HHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHH---HHHHHHHHH------SCCCE
T ss_pred HHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH---HHHHHHHHc------CCCCE
Q ss_pred EEEeCC
Q 021235 224 IVVACG 229 (315)
Q Consensus 224 ivv~vG 229 (315)
||..+|
T Consensus 133 lVnnAG 138 (346)
T 3kvo_A 133 LVNNAS 138 (346)
T ss_dssp EEECCC
T ss_pred EEECCC
No 257
>1o98_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; isomerase, alpha/beta-type structure; HET: 2PG; 1.4A {Bacillus stearothermophilus} SCOP: c.105.1.1 c.76.1.3 PDB: 1ejj_A* 1eqj_A* 1o99_A* 2ify_A
Probab=43.69 E-value=52 Score=32.19 Aligned_cols=51 Identities=18% Similarity=0.168 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHcCCC----EEEecCCchh--HHHHHHHHHHHHcCCe---EEEEecCCC
Q 021235 81 RKLEFLMADAVAQGAD----CIITIGGIQS--NHCRAAAVAAKYLNLD---CYLILRTSK 131 (315)
Q Consensus 81 R~l~~ll~~a~~~G~~----~vVt~g~s~G--Nhg~alA~aa~~lGl~---~~ivvp~~~ 131 (315)
-.+..++..+++.|.. .+++-||.+| +|..++.-.|++.|++ .|+|++.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~H~~gl~sdggvhsh~~hl~~l~~~a~~~g~~~v~~H~~~dGrD 154 (511)
T 1o98_A 95 ETFLAAMNHVKQHGTSLHLFGLLSDGGVHSHIHHLYALLRLAAKEGVKRVYIHGFLDGRD 154 (511)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECSSCCSSCCHHHHHHHHHHHHHTTCCCEEEEEEECSSS
T ss_pred HHHHHHHHHHHhcCCeEEEEEeccCCCCccHHHHHHHHHHHHHHCCCCeEEEEEEccCCC
Confidence 3456667777765532 4567777655 9999999999999995 678998754
No 258
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=43.66 E-value=44 Score=27.92 Aligned_cols=48 Identities=13% Similarity=0.100 Sum_probs=35.3
Q ss_pred CCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHHHHHHHHh
Q 021235 220 KFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLD 271 (315)
Q Consensus 220 ~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~~i~~l~~ 271 (315)
..+.|++..|.-+.+.|+..++- ...||||.+.............+++
T Consensus 62 g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~daLlS~vq 109 (174)
T 3lp6_A 62 GLEVIIAGAGGAAHLPGMVAAAT----PLPVIGVPVPLGRLDGLDSLLSIVQ 109 (174)
T ss_dssp TCCEEEEEEESSCCHHHHHHHHC----SSCEEEEEECCSSGGGHHHHHHHHC
T ss_pred CCCEEEEecCchhhhHHHHHhcc----CCCEEEeeCCCCCCCCHHHHHHHhh
Confidence 37799999999999999999874 5799999997654333444444443
No 259
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=43.54 E-value=43 Score=27.60 Aligned_cols=47 Identities=17% Similarity=0.060 Sum_probs=37.8
Q ss_pred CCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhhHHHHHHHHh
Q 021235 220 KFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLD 271 (315)
Q Consensus 220 ~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~~~~i~~l~~ 271 (315)
.++.|++..|.-+.+.|+..++- ...||||.+..+...... ...+++
T Consensus 58 ~~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~~l~G~d-LlS~vq 104 (159)
T 3rg8_A 58 RPKLYITIAGRSNALSGFVDGFV----KGATIACPPPSDSFAGAD-IYSSLR 104 (159)
T ss_dssp SCEEEEEECCSSCCHHHHHHHHS----SSCEEECCCCCCGGGGTH-HHHHHC
T ss_pred CCcEEEEECCchhhhHHHHHhcc----CCCEEEeeCCCCCCCCcc-HHHHHh
Confidence 48999999999999999999974 579999998876544455 666665
No 260
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=43.52 E-value=33 Score=31.51 Aligned_cols=48 Identities=19% Similarity=0.261 Sum_probs=34.8
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcC-CeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLN-LDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lG-l~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..| .|.-|++++..|+.+| .+.+++.+.. .+...++.+||+.++
T Consensus 197 ~~VlV~G--aG~vG~~aiqlak~~Ga~~Vi~~~~~~-----------~~~~~~~~lGa~~vi 245 (380)
T 1vj0_A 197 KTVVIQG--AGPLGLFGVVIARSLGAENVIVIAGSP-----------NRLKLAEEIGADLTL 245 (380)
T ss_dssp CEEEEEC--CSHHHHHHHHHHHHTTBSEEEEEESCH-----------HHHHHHHHTTCSEEE
T ss_pred CEEEEEC--cCHHHHHHHHHHHHcCCceEEEEcCCH-----------HHHHHHHHcCCcEEE
Confidence 4566565 3789999999999999 4766654332 357788899997554
No 261
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=43.51 E-value=35 Score=30.49 Aligned_cols=49 Identities=6% Similarity=0.041 Sum_probs=33.8
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ +|.-|++++..++..|.+.+++.+.. .+...++.+|++.+.
T Consensus 147 ~~vlV~Ga-~ggiG~~~~~~~~~~G~~V~~~~~~~-----------~~~~~~~~~g~~~~~ 195 (333)
T 1v3u_A 147 ETVLVSAA-AGAVGSVVGQIAKLKGCKVVGAAGSD-----------EKIAYLKQIGFDAAF 195 (333)
T ss_dssp CEEEEEST-TBHHHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHTTCSEEE
T ss_pred CEEEEecC-CCcHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHhcCCcEEE
Confidence 45554554 47899999999999999766654321 245666888987544
No 262
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=43.46 E-value=1.4e+02 Score=24.73 Aligned_cols=55 Identities=13% Similarity=0.037 Sum_probs=32.6
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
+++..|+ +|.-|.++|....+.|.+++++....... .......++..|.++..+.
T Consensus 7 ~vlItGa-sggiG~~~a~~l~~~G~~V~~~~~r~~~~------~~~~~~~~~~~~~~~~~~~ 61 (247)
T 2hq1_A 7 TAIVTGS-SRGLGKAIAWKLGNMGANIVLNGSPASTS------LDATAEEFKAAGINVVVAK 61 (247)
T ss_dssp EEEESSC-SSHHHHHHHHHHHHTTCEEEEEECTTCSH------HHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECC-CchHHHHHHHHHHHCCCEEEEEcCcCHHH------HHHHHHHHHhcCCcEEEEE
Confidence 3443454 47899999999999999877763322210 0111233445676766554
No 263
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=43.35 E-value=76 Score=27.13 Aligned_cols=86 Identities=9% Similarity=0.007 Sum_probs=47.2
Q ss_pred HHHHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCCcc
Q 021235 83 LEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEY 162 (315)
Q Consensus 83 l~~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~ 162 (315)
...+...+.+.|.+++|+ ++ ....-++..-+..|- +.++.|.-.+.- ++.......|++++.+++.-+
T Consensus 117 v~~~a~~a~~~G~~GvV~-sa---t~~~e~~~ir~~~~~-f~~v~pGI~~~g-------~~~~~a~~~Gad~iVvGr~I~ 184 (215)
T 3ve9_A 117 YPYLREVARRVNPKGFVA-PA---TRPSMISRVKGDFPD-KLVISPGVGTQG-------AKPGIALCHGADYEIVGRSVY 184 (215)
T ss_dssp HHHHHHHHHHHCCSEEEC-CT---TSHHHHHHHHHHCTT-SEEEECCTTSTT-------CCTTHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHHHHcCCCceee-CC---CCHHHHHHHHHhCCC-cEEEcCCCCcCc-------CCHHHHHHcCCCEEEeCHHHc
Confidence 344455667778888884 32 223344555555676 677777654321 123344567999988887534
Q ss_pred cccChHHHHHHHHHHHHH
Q 021235 163 SKIGSVTLTNILKEKLLK 180 (315)
Q Consensus 163 ~~~~~~~~~~~~~~~l~~ 180 (315)
...+..+.++++.+++.+
T Consensus 185 ~a~dp~~a~~~i~~~i~~ 202 (215)
T 3ve9_A 185 QSADPVRKLEEIVRSQEE 202 (215)
T ss_dssp TSSSHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 332333334444444443
No 264
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=43.25 E-value=1.7e+02 Score=25.77 Aligned_cols=35 Identities=20% Similarity=-0.023 Sum_probs=26.0
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEec
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSV 255 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~ 255 (315)
.+||+||| .+..++.|+..++++.+. ++.|+|++-
T Consensus 249 ~~~~ai~~--~nD~~A~g~~~al~~~G~~vP~disvigfD~ 287 (355)
T 3e3m_A 249 PDTDCIFC--VSDMPAFGLLSRLKSIGVAVPEQVSVVGFGN 287 (355)
T ss_dssp TTCCEEEE--SSHHHHHHHHHHHHHHTCCTTTTCEEECSSC
T ss_pred CCCcEEEE--CChHHHHHHHHHHHHcCCCCCCceEEEEECC
Confidence 46899887 456778899999988763 677877753
No 265
>1yzv_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.00A {Trypanosoma cruzi}
Probab=43.25 E-value=10 Score=32.38 Aligned_cols=62 Identities=10% Similarity=0.029 Sum_probs=40.9
Q ss_pred HHcCCCEEEecCCchhHHH-HHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHH---hCCCEEE
Q 021235 91 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVER---LVGAHIE 155 (315)
Q Consensus 91 ~~~G~~~vVt~g~s~GNhg-~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r---~~GAeV~ 155 (315)
.+.|.++||.+|-. .|.| .++|.-|..+|++++++.+.......+ .....+..++ .+|+.|.
T Consensus 106 ~~~gi~~lvi~Gv~-T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~--~h~~aL~~m~~~~~~g~~v~ 171 (204)
T 1yzv_A 106 DLPEVEQVVLWGFE-THVCILQTAAALLDMKKKVVIAVDGCGSQSQG--DHCTAIQLMQSWSGDGCYIS 171 (204)
T ss_dssp SSTTEEEEEEEEEC-TTTHHHHHHHHHHHTTCEEEEEEEEEECSSHH--HHHHHHHHHHTTGGGTEEEE
T ss_pred HhCCCCEEEEEEec-cCHHHHHHHHHHHHCCCEEEEECCccCCCCHH--HHHHHHHHHHHHhcCCeEEe
Confidence 35788889887644 4555 578889999999999988765432110 0123356677 7787653
No 266
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=43.16 E-value=1.5e+02 Score=25.88 Aligned_cols=30 Identities=17% Similarity=-0.035 Sum_probs=22.3
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
.||| |+ +|.-|.++|....+.|.+++++.+
T Consensus 37 vlVT-Ga-s~gIG~aia~~L~~~G~~V~~~~r 66 (291)
T 3cxt_A 37 ALVT-GA-SYGIGFAIASAYAKAGATIVFNDI 66 (291)
T ss_dssp EEEE-TC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3454 54 478899999998889998777654
No 267
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=43.11 E-value=37 Score=31.87 Aligned_cols=47 Identities=21% Similarity=0.054 Sum_probs=33.0
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 155 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~ 155 (315)
.+|+..|+ |+-|+++|..++.+|.+++++ +... .+...++.+|++.+
T Consensus 173 ~~V~ViGa--G~iG~~aa~~a~~~Ga~V~v~-D~~~----------~~~~~~~~lGa~~~ 219 (401)
T 1x13_A 173 AKVMVIGA--GVAGLAAIGAANSLGAIVRAF-DTRP----------EVKEQVQSMGAEFL 219 (401)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEE-CSCG----------GGHHHHHHTTCEEC
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEE-cCCH----------HHHHHHHHcCCEEE
Confidence 45666665 899999999999999864443 3221 13555678899865
No 268
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=43.00 E-value=1.5e+02 Score=25.05 Aligned_cols=36 Identities=8% Similarity=-0.013 Sum_probs=28.2
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCC----CCCeEEEEecc
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGT----LKAKVHAFSVC 256 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~----~~~rVigV~~~ 256 (315)
.++|+||+ .+..++.|+..++++.+ .++.|+|++-.
T Consensus 185 ~~~~ai~~--~~d~~a~g~~~al~~~g~~vP~di~vvg~d~~ 224 (291)
T 3egc_A 185 DRPTALLT--SSHRITEGAMQALNVLGLRYGPDVEIVSFDNL 224 (291)
T ss_dssp CCCSEEEE--SSHHHHHHHHHHHHHHTCCBTTTBEEEEESCC
T ss_pred CCCcEEEE--CCcHHHHHHHHHHHHcCCCCCCceEEEEecCc
Confidence 46899986 56677889999999876 36789998754
No 269
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=42.64 E-value=31 Score=31.50 Aligned_cols=49 Identities=12% Similarity=0.100 Sum_probs=34.0
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..| + |.-|+.++..|+.+|.+-++.+..+. .+...++.+||+.++
T Consensus 192 ~~VlV~G-a-G~vG~~avqla~~~Ga~~Vi~~~~~~----------~~~~~~~~lGa~~vi 240 (373)
T 2fzw_A 192 SVCAVFG-L-GGVGLAVIMGCKVAGASRIIGVDINK----------DKFARAKEFGATECI 240 (373)
T ss_dssp CEEEEEC-C-SHHHHHHHHHHHHHTCSEEEEECSCG----------GGHHHHHHHTCSEEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHcCCCeEEEEcCCH----------HHHHHHHHcCCceEe
Confidence 4565565 3 78999999999999995444443221 257788899997544
No 270
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=42.63 E-value=1.7e+02 Score=25.47 Aligned_cols=33 Identities=15% Similarity=0.052 Sum_probs=23.2
Q ss_pred CEEEecCCch-hHHHHHHHHHHHHcCCeEEEEecC
Q 021235 96 DCIITIGGIQ-SNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 96 ~~vVt~g~s~-GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
..||| |+++ .--|+++|..-.+.|.+++++-+.
T Consensus 32 ~vlVT-Gasg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 32 KGVII-GVANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp EEEEE-CCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEE-eCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 34555 5542 378889999989999987766543
No 271
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=42.58 E-value=38 Score=31.89 Aligned_cols=69 Identities=19% Similarity=0.192 Sum_probs=37.6
Q ss_pred CCCeEEEeCC-chhhHHHHHHHH----hcCCCCCeEEEEeccCCchhhHHHHHH---HHhhhcC-CCCCCCeEEecCCcc
Q 021235 220 KFDDIVVACG-SGGTIAGLSLGS----WLGTLKAKVHAFSVCDDPDYFYDYTQG---LLDGLNA-GVDSRDIVNIQNVSV 290 (315)
Q Consensus 220 ~~D~ivv~vG-tGGt~aGl~~~~----k~~~~~~rVigV~~~g~~~~~~~~i~~---l~~g~~~-~~~~~dvv~v~e~~~ 290 (315)
..|.||+.+| +|||=+|.+-.+ |+. ...+++|-+............. -+..+.. ...+|-++.|++.+.
T Consensus 111 ~~d~vfi~ag~GGGTGtGa~pvia~~~ke~--~~~~~~vvt~Pf~~Eg~~~~~~A~~~i~~l~~~~~~vd~~ividN~~l 188 (389)
T 4ei7_A 111 DRDFIWITCGLGGGTGTGALLKAIEMLYEH--DYNFGLLLTLPRDAEALKVLENATSRIRSIAMNQEAFGSIVLIDNAKL 188 (389)
T ss_dssp TCSEEEEEEETTSSHHHHHHHHHHHHHHHT--TCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTGGGSSEEEEEEHHHH
T ss_pred CccEEEEEecCCCCCccccHHHHHHHHHHc--CCCEEEEEEeCCCcCchHHHHHHHHHHHHHHHHhccCCeEEEeccHHH
Confidence 4788888776 666666655443 443 4567777766544333222222 2222321 124677888887643
No 272
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=42.54 E-value=1.1e+02 Score=26.36 Aligned_cols=11 Identities=9% Similarity=-0.046 Sum_probs=8.3
Q ss_pred CCCeEEEEecc
Q 021235 246 LKAKVHAFSVC 256 (315)
Q Consensus 246 ~~~rVigV~~~ 256 (315)
..++|..|.+.
T Consensus 185 ~gI~vn~v~PG 195 (274)
T 3e03_A 185 QGVAINALWPR 195 (274)
T ss_dssp GTCEEEEEECS
T ss_pred cCEEEEEEECC
Confidence 35888888875
No 273
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=42.27 E-value=31 Score=31.47 Aligned_cols=50 Identities=18% Similarity=0.181 Sum_probs=35.2
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELI 157 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v 157 (315)
++|+..| + |.-|++++..|+.+|.+-++.+..+. .+..+++.+||+.++-
T Consensus 192 ~~VlV~G-a-G~vG~~a~qlak~~Ga~~Vi~~~~~~----------~~~~~a~~lGa~~vi~ 241 (371)
T 1f8f_A 192 SSFVTWG-A-GAVGLSALLAAKVCGASIIIAVDIVE----------SRLELAKQLGATHVIN 241 (371)
T ss_dssp CEEEEES-C-SHHHHHHHHHHHHHTCSEEEEEESCH----------HHHHHHHHHTCSEEEE
T ss_pred CEEEEEC-C-CHHHHHHHHHHHHcCCCeEEEECCCH----------HHHHHHHHcCCCEEec
Confidence 4565555 3 78899999999999996444443322 3577889999986553
No 274
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=42.19 E-value=1.6e+02 Score=24.95 Aligned_cols=72 Identities=10% Similarity=-0.056 Sum_probs=42.9
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcCCcccccChHHHHHHHHH
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKE 176 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~ 176 (315)
.||| |++ |--|.++|..-.+.|.+++++-+.... ...-...++..|.++..+.-+--+ .+.++++.+
T Consensus 10 vlVT-Gas-~GIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~----~~~v~~~~~ 76 (252)
T 3h7a_A 10 VAVI-GAG-DYIGAEIAKKFAAEGFTVFAGRRNGEK-------LAPLVAEIEAAGGRIVARSLDARN----EDEVTAFLN 76 (252)
T ss_dssp EEEE-CCS-SHHHHHHHHHHHHTTCEEEEEESSGGG-------GHHHHHHHHHTTCEEEEEECCTTC----HHHHHHHHH
T ss_pred EEEE-CCC-chHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCeEEEEECcCCC----HHHHHHHHH
Confidence 3454 544 678999999999999997777553321 112244556678888776542111 233455555
Q ss_pred HHHHh
Q 021235 177 KLLKE 181 (315)
Q Consensus 177 ~l~~~ 181 (315)
++.+.
T Consensus 77 ~~~~~ 81 (252)
T 3h7a_A 77 AADAH 81 (252)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 55544
No 275
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=42.13 E-value=47 Score=30.89 Aligned_cols=97 Identities=15% Similarity=0.048 Sum_probs=47.1
Q ss_pred HhCCC-EEEEEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEE
Q 021235 148 RLVGA-HIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVV 226 (315)
Q Consensus 148 r~~GA-eV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv 226 (315)
+.+|. ++.+|.+....+. ...+++.+.+++.+-....++....||.- ....++.+++.+ .++| +|+
T Consensus 27 ~~~g~~~~liVtd~~~~~~---g~~~~v~~~L~~~gi~~~~~~~v~~~p~~-----~~v~~~~~~~~~----~~~D-~II 93 (383)
T 3ox4_A 27 NGSGFKNALIVSDAFMNKS---GVVKQVADLLKAQGINSAVYDGVMPNPTV-----TAVLEGLKILKD----NNSD-FVI 93 (383)
T ss_dssp TTSCCCEEEEEEEHHHHHT---THHHHHHHHHHTTTCEEEEEEEECSSCBH-----HHHHHHHHHHHH----HTCS-EEE
T ss_pred HHcCCCEEEEEECCchhhC---chHHHHHHHHHHcCCeEEEECCccCCCCH-----HHHHHHHHHHHh----cCcC-EEE
Confidence 44664 4555543222111 12355566676654333233322234431 123344444432 2366 678
Q ss_pred eCCchhhH--HHHHHHHhcC--------------CCCCeEEEEeccC
Q 021235 227 ACGSGGTI--AGLSLGSWLG--------------TLKAKVHAFSVCD 257 (315)
Q Consensus 227 ~vGtGGt~--aGl~~~~k~~--------------~~~~rVigV~~~g 257 (315)
++|+|..+ ++.+...... .+.++++.|...-
T Consensus 94 avGGGsv~D~aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTa 140 (383)
T 3ox4_A 94 SLGGGSPHDCAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINTTA 140 (383)
T ss_dssp EEESHHHHHHHHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEECSS
T ss_pred EeCCcHHHHHHHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeCCC
Confidence 99998765 4444443311 2467888887754
No 276
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=41.90 E-value=1.7e+02 Score=25.10 Aligned_cols=30 Identities=27% Similarity=0.188 Sum_probs=22.8
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
.||| |++ +--|.++|..-.+.|.+++++-.
T Consensus 14 ~lVT-Gas-~GIG~a~a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 14 AFIT-GAA-RGQGRAHAVRMAAEGADIIAVDI 43 (277)
T ss_dssp EEEE-STT-SHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEE-CCc-cHHHHHHHHHHHHcCCEEEEEec
Confidence 4554 543 67899999999999999887754
No 277
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=41.85 E-value=54 Score=28.71 Aligned_cols=35 Identities=0% Similarity=0.004 Sum_probs=22.5
Q ss_pred HHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 91 VAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 91 ~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
.++|++.++ ++ ..-..+..++...+..|-++..+.
T Consensus 28 a~~Ga~Vv~-~~-~~~~~~~~~~~~i~~~g~~~~~~~ 62 (254)
T 4fn4_A 28 ALNDSIVVA-VE-LLEDRLNQIVQELRGMGKEVLGVK 62 (254)
T ss_dssp HHTTCEEEE-EE-SCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHcCCEEEE-EE-CCHHHHHHHHHHHHhcCCcEEEEE
Confidence 357766444 33 334566777777788888877654
No 278
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=41.83 E-value=1.5e+02 Score=25.09 Aligned_cols=33 Identities=9% Similarity=-0.016 Sum_probs=22.8
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
+++..|++++--|.++|....+.|.+++++-+.
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCCCchHHHHHHHHHHCCCEEEEecCC
Confidence 344346543358999999999999987766443
No 279
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=41.58 E-value=1.5e+02 Score=24.59 Aligned_cols=31 Identities=13% Similarity=0.124 Sum_probs=22.6
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
+++..|+ +|.-|.++|..-.+.|.+++++.+
T Consensus 13 ~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r 43 (255)
T 1fmc_A 13 CAIITGA-GAGIGKEIAITFATAGASVVVSDI 43 (255)
T ss_dssp EEEETTT-TSHHHHHHHHHHHTTTCEEEEEES
T ss_pred EEEEECC-ccHHHHHHHHHHHHCCCEEEEEcC
Confidence 4444454 478999999988888988776654
No 280
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=41.32 E-value=19 Score=36.31 Aligned_cols=36 Identities=14% Similarity=0.112 Sum_probs=28.9
Q ss_pred eEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCC
Q 021235 223 DIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDD 258 (315)
Q Consensus 223 ~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~ 258 (315)
.+++++|+|-+..-.+.+.+..+.++||++||....
T Consensus 361 VldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~ 396 (637)
T 4gqb_A 361 LMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN 396 (637)
T ss_dssp EEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH
T ss_pred EEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH
Confidence 556788888887777788787778889999998653
No 281
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=41.23 E-value=29 Score=30.96 Aligned_cols=49 Identities=14% Similarity=-0.029 Sum_probs=34.2
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ +|.-|++++..|+..|.+.+++.+.. .+...++.+|++.+.
T Consensus 142 ~~vlV~Ga-~ggiG~~~~~~a~~~G~~V~~~~~~~-----------~~~~~~~~~g~~~~~ 190 (327)
T 1qor_A 142 EQFLFHAA-AGGVGLIACQWAKALGAKLIGTVGTA-----------QKAQSALKAGAWQVI 190 (327)
T ss_dssp CEEEESST-TBHHHHHHHHHHHHHTCEEEEEESSH-----------HHHHHHHHHTCSEEE
T ss_pred CEEEEECC-CCHHHHHHHHHHHHcCCEEEEEeCCH-----------HHHHHHHHcCCCEEE
Confidence 45655554 47899999999999999766654321 246667778987554
No 282
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=40.96 E-value=1.7e+02 Score=24.87 Aligned_cols=30 Identities=33% Similarity=0.267 Sum_probs=22.3
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
.+|| |+ +|.-|+++|..-.+.|.+++++.+
T Consensus 16 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 45 (267)
T 1iy8_A 16 VLIT-GG-GSGLGRATAVRLAAEGAKLSLVDV 45 (267)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEE-CC-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 3454 54 478899999998889988777654
No 283
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=40.83 E-value=1.6e+02 Score=25.08 Aligned_cols=32 Identities=16% Similarity=0.036 Sum_probs=23.1
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
+++..|+ +|--|.++|....+.|.+++++.+.
T Consensus 33 ~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~ 64 (272)
T 1yb1_A 33 IVLITGA-GHGIGRLTAYEFAKLKSKLVLWDIN 64 (272)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECC-CchHHHHHHHHHHHCCCEEEEEEcC
Confidence 3443454 4789999999999999987776543
No 284
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=40.46 E-value=25 Score=31.75 Aligned_cols=49 Identities=18% Similarity=0.180 Sum_probs=34.4
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ +|.-|++++..++.+|.+.+++.+.. .+...++.+|++.+.
T Consensus 168 ~~vlV~Ga-sg~iG~~~~~~a~~~G~~Vi~~~~~~-----------~~~~~~~~~ga~~~~ 216 (343)
T 2eih_A 168 DDVLVMAA-GSGVSVAAIQIAKLFGARVIATAGSE-----------DKLRRAKALGADETV 216 (343)
T ss_dssp CEEEECST-TSTTHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHHTCSEEE
T ss_pred CEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHhcCCCEEE
Confidence 45655554 47889999999999999766654321 256677788987543
No 285
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=40.24 E-value=82 Score=29.19 Aligned_cols=47 Identities=17% Similarity=0.034 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHH-cCC-----CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 80 VRKLEFLMADAVA-QGA-----DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 80 ~R~l~~ll~~a~~-~G~-----~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
-|++.+.+..+.+ .|. ++|+..|. ||-|+.+|..++.+|.+++ +.+.
T Consensus 154 g~Gv~~~~~~~~~~~G~~~L~GktV~I~G~--GnVG~~~A~~l~~~GakVv-vsD~ 206 (355)
T 1c1d_A 154 AVGVFEAMKATVAHRGLGSLDGLTVLVQGL--GAVGGSLASLAAEAGAQLL-VADT 206 (355)
T ss_dssp HHHHHHHHHHHHHHTTCCCSTTCEEEEECC--SHHHHHHHHHHHHTTCEEE-EECS
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCEEEEECc--CHHHHHHHHHHHHCCCEEE-EEeC
Confidence 3566666666543 443 46666664 9999999999999999887 5543
No 286
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=40.15 E-value=73 Score=26.47 Aligned_cols=32 Identities=13% Similarity=0.181 Sum_probs=24.6
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
+|+..|+ +|.-|.++|......|.+++++.+.
T Consensus 23 ~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 23 RVLVVGA-NGKVARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred eEEEECC-CChHHHHHHHHHHhCCCeEEEEECC
Confidence 3433454 5899999999999999998888765
No 287
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=39.97 E-value=41 Score=28.24 Aligned_cols=38 Identities=13% Similarity=0.105 Sum_probs=28.3
Q ss_pred HHHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 84 EFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 84 ~~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
+..+.++.++|++.|| |+ .-+.-.|+++|++++++..+
T Consensus 132 ~~~i~~l~~~G~~vvV--G~------~~~~~~A~~~Gl~~vli~sg 169 (196)
T 2q5c_A 132 TTLISKVKTENIKIVV--SG------KTVTDEAIKQGLYGETINSG 169 (196)
T ss_dssp HHHHHHHHHTTCCEEE--EC------HHHHHHHHHTTCEEEECCCC
T ss_pred HHHHHHHHHCCCeEEE--CC------HHHHHHHHHcCCcEEEEecC
Confidence 4567888899999887 43 24477789999998887543
No 288
>3irv_A Cysteine hydrolase; structural genomics, PSI-2, protein structure initiative, CY hydrolase; 1.60A {Pseudomonas syringae PV}
Probab=39.91 E-value=44 Score=28.76 Aligned_cols=62 Identities=18% Similarity=0.202 Sum_probs=40.8
Q ss_pred CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEecCCchhHHH-HHHHHHHHHcCCeEEEEecCCC
Q 021235 60 NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSK 131 (315)
Q Consensus 60 g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg-~alA~aa~~lGl~~~ivvp~~~ 131 (315)
+-.++-|.- . ++|..-.+..+| +++|+++||.+|-. .|.| .++|.-|..+|++++++-+...
T Consensus 113 ~d~vi~K~~-~-----saF~~t~L~~~L---~~~gi~~lvi~G~~-T~~CV~~Ta~dA~~~Gy~V~vv~Da~a 175 (233)
T 3irv_A 113 DDVIVDKLF-Y-----SGFHNTDLDTVL---RARDVDTIIVCGTV-TNVCCETTIRDGVHREYKVIALSDANA 175 (233)
T ss_dssp TSEEEEESS-S-----CSSTTSTHHHHH---HHTTCCEEEEEEEC-TTTHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CCEEEECCc-c-----CCCcCCcHHHHH---HhCCCCeEEEEeec-ccHHHHHHHHHHHHCCCEEEEechhhc
Confidence 446777862 2 333322343333 45799999988644 4555 5788999999999999887544
No 289
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=39.88 E-value=1.8e+02 Score=24.97 Aligned_cols=33 Identities=9% Similarity=-0.059 Sum_probs=23.4
Q ss_pred EEEecCCch-hHHHHHHHHHHHHcCCeEEEEecC
Q 021235 97 CIITIGGIQ-SNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 97 ~vVt~g~s~-GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
+++..|+++ |--|.++|....+.|.+++++.+.
T Consensus 23 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~ 56 (285)
T 2p91_A 23 RALITGVANERSIAYGIAKSFHREGAQLAFTYAT 56 (285)
T ss_dssp EEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 344346542 678999999988999987776543
No 290
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=39.86 E-value=26 Score=31.48 Aligned_cols=49 Identities=14% Similarity=0.125 Sum_probs=34.3
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ +|.-|++++..++.+|.+++++.+.. .+...++.+|++.+.
T Consensus 147 ~~vlV~Ga-~ggiG~~~~~~a~~~G~~Vi~~~~~~-----------~~~~~~~~~g~~~~~ 195 (333)
T 1wly_A 147 DYVLIHAA-AGGMGHIMVPWARHLGATVIGTVSTE-----------EKAETARKLGCHHTI 195 (333)
T ss_dssp CEEEETTT-TSTTHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHHTCSEEE
T ss_pred CEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHcCCCEEE
Confidence 45655554 47899999999999999766654321 246667778987554
No 291
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=39.83 E-value=26 Score=31.68 Aligned_cols=48 Identities=13% Similarity=0.024 Sum_probs=34.0
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCC-eEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNL-DCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl-~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|+ |.-|++++..|+.+|. +.+++.+. ..+...++.+|++.+.
T Consensus 169 ~~VlV~Ga--G~vG~~~~q~a~~~Ga~~Vi~~~~~-----------~~~~~~~~~~Ga~~~~ 217 (348)
T 2d8a_A 169 KSVLITGA--GPLGLLGIAVAKASGAYPVIVSEPS-----------DFRRELAKKVGADYVI 217 (348)
T ss_dssp CCEEEECC--SHHHHHHHHHHHHTTCCSEEEECSC-----------HHHHHHHHHHTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCC-----------HHHHHHHHHhCCCEEE
Confidence 34554554 7899999999999999 65555332 1357788889997554
No 292
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=39.80 E-value=1.5e+02 Score=25.06 Aligned_cols=31 Identities=16% Similarity=0.167 Sum_probs=22.0
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
+++..|+ +|--|.++|..-.+.|.+++++.+
T Consensus 7 ~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r 37 (260)
T 2qq5_A 7 VCVVTGA-SRGIGRGIALQLCKAGATVYITGR 37 (260)
T ss_dssp EEEESST-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCC-CchHHHHHHHHHHHCCCEEEEEeC
Confidence 3443454 467899999998889988776643
No 293
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=39.76 E-value=44 Score=30.22 Aligned_cols=49 Identities=12% Similarity=0.149 Sum_probs=33.6
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCC-eEEEEecCCCcccCCCCCccchHHHHHh-CCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNL-DCYLILRTSKVLVDQDPGLIGNLLVERL-VGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl-~~~ivvp~~~~~~~~~p~~~~n~~~~r~-~GAeV~~ 156 (315)
++|+..|+ +|.-|++++..|+.+|. +.+++.+.. .+...++. +|++.+.
T Consensus 162 ~~vlI~Ga-sggiG~~~~~~a~~~Ga~~Vi~~~~~~-----------~~~~~~~~~~g~~~~~ 212 (357)
T 2zb4_A 162 KTMVVSGA-AGACGSVAGQIGHFLGCSRVVGICGTH-----------EKCILLTSELGFDAAI 212 (357)
T ss_dssp CEEEESST-TBHHHHHHHHHHHHTTCSEEEEEESCH-----------HHHHHHHHTSCCSEEE
T ss_pred cEEEEECC-CcHHHHHHHHHHHHCCCCeEEEEeCCH-----------HHHHHHHHHcCCceEE
Confidence 45555554 47899999999999999 666554321 24566665 8987544
No 294
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=39.71 E-value=1.4e+02 Score=25.67 Aligned_cols=31 Identities=19% Similarity=0.262 Sum_probs=22.6
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
..||| |+ +|--|.++|..-.+.|.+++++-+
T Consensus 13 ~vlVT-Ga-s~gIG~aia~~l~~~G~~V~~~~r 43 (281)
T 3svt_A 13 TYLVT-GG-GSGIGKGVAAGLVAAGASVMIVGR 43 (281)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEe-CC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 34454 54 467899999999999998777644
No 295
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=39.51 E-value=1.7e+02 Score=24.65 Aligned_cols=30 Identities=27% Similarity=0.185 Sum_probs=22.0
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
.||| |+ +|.-|.++|..-.+.|.+++++.+
T Consensus 10 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r 39 (263)
T 3ai3_A 10 AVIT-GS-SSGIGLAIAEGFAKEGAHIVLVAR 39 (263)
T ss_dssp EEEE-SC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEE-CC-CchHHHHHHHHHHHCCCEEEEEcC
Confidence 3454 54 468899999988889988776644
No 296
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=39.20 E-value=73 Score=26.34 Aligned_cols=67 Identities=15% Similarity=0.116 Sum_probs=43.5
Q ss_pred HHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEec-CCCcccCCCCCccchHHHHHhCCCEEEEEcC
Q 021235 85 FLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR-TSKVLVDQDPGLIGNLLVERLVGAHIELISK 159 (315)
Q Consensus 85 ~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp-~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~ 159 (315)
+++..+.+.|++.|+....+...+...+...++.+|+++.+-+. ...+ ...+..+...|++.+.+..
T Consensus 68 ~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~t~--------~~~~~~~~~~g~d~i~v~~ 135 (211)
T 3f4w_A 68 FESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDL--------PARVRLLEEAGADMLAVHT 135 (211)
T ss_dssp HHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSH--------HHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecCCCCH--------HHHHHHHHHcCCCEEEEcC
Confidence 34777888999988765433225557778888999998876332 1111 1235566678999877754
No 297
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=39.14 E-value=34 Score=31.31 Aligned_cols=48 Identities=19% Similarity=0.192 Sum_probs=33.9
Q ss_pred EEEecCCchhHHHHHHHHHHHH-cCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 97 CIITIGGIQSNHCRAAAVAAKY-LNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~-lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
+|+..|+ .|.-|++++..|+. .|.+.+++.+. ..+...++.+||+.++
T Consensus 174 ~VlV~Ga-~G~vG~~a~qlak~~~g~~Vi~~~~~-----------~~~~~~~~~lGad~vi 222 (363)
T 4dvj_A 174 AILIVGG-AGGVGSIAVQIARQRTDLTVIATASR-----------PETQEWVKSLGAHHVI 222 (363)
T ss_dssp EEEEEST-TSHHHHHHHHHHHHHCCSEEEEECSS-----------HHHHHHHHHTTCSEEE
T ss_pred EEEEECC-CCHHHHHHHHHHHHhcCCEEEEEeCC-----------HHHHHHHHHcCCCEEE
Confidence 4555553 37889999999998 48876655432 1367888999998665
No 298
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=39.05 E-value=2e+02 Score=25.35 Aligned_cols=70 Identities=13% Similarity=-0.019 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHHHHHcCC-CEEEecCCchhHH----H-HHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCC
Q 021235 78 NKVRKLEFLMADAVAQGA-DCIITIGGIQSNH----C-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVG 151 (315)
Q Consensus 78 ~K~R~l~~ll~~a~~~G~-~~vVt~g~s~GNh----g-~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~G 151 (315)
...++...++.+.+++.. ..+|.. +.-|- | -..+..|+..|+..+++.+-.. .+ ...-...++.+|
T Consensus 79 ~~~~~~~~~v~~~r~~~~~~Pivlm--~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~--ee----~~~~~~~~~~~g 150 (271)
T 3nav_A 79 TTPDICFELIAQIRARNPETPIGLL--MYANLVYARGIDDFYQRCQKAGVDSVLIADVPT--NE----SQPFVAAAEKFG 150 (271)
T ss_dssp CCHHHHHHHHHHHHHHCTTSCEEEE--ECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCG--GG----CHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhcCCCCCEEEE--ecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCH--HH----HHHHHHHHHHcC
Confidence 445555556665554422 223322 12342 1 2356666667777766643211 10 112355566777
Q ss_pred CEEE
Q 021235 152 AHIE 155 (315)
Q Consensus 152 AeV~ 155 (315)
-+++
T Consensus 151 l~~I 154 (271)
T 3nav_A 151 IQPI 154 (271)
T ss_dssp CEEE
T ss_pred CeEE
Confidence 6644
No 299
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=38.76 E-value=79 Score=26.92 Aligned_cols=71 Identities=10% Similarity=0.055 Sum_probs=43.6
Q ss_pred HHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCe
Q 021235 144 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 223 (315)
Q Consensus 144 ~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ 223 (315)
...+...|++|+.+++.. +. .+++.+++.+.+.+..+++.+-+++... ..+..++.++ . ++|.
T Consensus 24 a~~l~~~G~~V~~~~r~~-~~------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v---~~~~~~~~~~-g------~id~ 86 (252)
T 3h7a_A 24 AKKFAAEGFTVFAGRRNG-EK------LAPLVAEIEAAGGRIVARSLDARNEDEV---TAFLNAADAH-A------PLEV 86 (252)
T ss_dssp HHHHHHTTCEEEEEESSG-GG------GHHHHHHHHHTTCEEEEEECCTTCHHHH---HHHHHHHHHH-S------CEEE
T ss_pred HHHHHHCCCEEEEEeCCH-HH------HHHHHHHHHhcCCeEEEEECcCCCHHHH---HHHHHHHHhh-C------CceE
Confidence 344455699999988742 11 2344556666555556666655555443 3355566554 3 5899
Q ss_pred EEEeCCch
Q 021235 224 IVVACGSG 231 (315)
Q Consensus 224 ivv~vGtG 231 (315)
+|..+|.+
T Consensus 87 lv~nAg~~ 94 (252)
T 3h7a_A 87 TIFNVGAN 94 (252)
T ss_dssp EEECCCCC
T ss_pred EEECCCcC
Confidence 99999864
No 300
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=38.58 E-value=1.7e+02 Score=24.97 Aligned_cols=30 Identities=23% Similarity=0.245 Sum_probs=22.4
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
.||| |+ +|--|+++|....+.|.+++++-+
T Consensus 24 vlVT-Ga-s~gIG~aia~~l~~~G~~V~~~~r 53 (273)
T 1ae1_A 24 ALVT-GG-SKGIGYAIVEELAGLGARVYTCSR 53 (273)
T ss_dssp EEEE-SC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEE-CC-cchHHHHHHHHHHHCCCEEEEEeC
Confidence 3454 54 478899999999999998776654
No 301
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=38.38 E-value=29 Score=29.38 Aligned_cols=30 Identities=10% Similarity=0.119 Sum_probs=24.4
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
|+..|| |..|..+|...+++|++++++-+.
T Consensus 6 VvVVGg--G~aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 6 VLIVGA--GFSGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEECc--CHHHHHHHHHHHHCCCCEEEEecC
Confidence 333566 789999999999999999988654
No 302
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=38.34 E-value=2e+02 Score=24.98 Aligned_cols=160 Identities=10% Similarity=0.008 Sum_probs=75.6
Q ss_pred HHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcc-----cCCCCCccch---HHHHHh-CCC-EEE
Q 021235 86 LMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-----VDQDPGLIGN---LLVERL-VGA-HIE 155 (315)
Q Consensus 86 ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~-----~~~~p~~~~n---~~~~r~-~GA-eV~ 155 (315)
.+....+++++.||..+. ..+........+...|++++++-...... ...+....+. ..+.+. .|. +|.
T Consensus 54 ~i~~l~~~~vdgiIi~~~-~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~~~G~~~I~ 132 (325)
T 2x7x_A 54 DVHYFMDEGVDLLIISAN-EAAPMTPIVEEAYQKGIPVILVDRKILSDKYTAYIGADNYEIGRSVGNYIASSLKGKGNIV 132 (325)
T ss_dssp HHHHHHHTTCSEEEECCS-SHHHHHHHHHHHHHTTCCEEEESSCCSSSCSSEEEEECHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred HHHHHHHcCCCEEEEeCC-CHHHHHHHHHHHHHCCCeEEEeCCCCCCcceeEEEecCHHHHHHHHHHHHHHHcCCCceEE
Confidence 355566788999987643 23332333444567899988774321110 0000000111 112232 254 455
Q ss_pred EEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHH
Q 021235 156 LISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIA 235 (315)
Q Consensus 156 ~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~a 235 (315)
++.... .......+.+-..+.+++. +..-+.+....+.....|+ ....++.++- .++|+||+. +...+.
T Consensus 133 ~i~~~~-~~~~~~~R~~Gf~~al~~~-pg~~~~~~~~~~~~~~~~~-~~~~~ll~~~------~~~~aI~~~--nd~~A~ 201 (325)
T 2x7x_A 133 ELTGLS-GSTPAMERHQGFMAAISKF-PDIKLIDKADAAWERGPAE-IEMDSMLRRH------PKIDAVYAH--NDRIAP 201 (325)
T ss_dssp EEESCT-TSHHHHHHHHHHHHHHHTC-TEEEEEEEEECTTSHHHHH-HHHHHHHHHC------SCCCEEEES--STTHHH
T ss_pred EEECCC-CCccHHHHHHHHHHHHHhC-CCCEEEeeecCCCCHHHHH-HHHHHHHHhC------CCCCEEEEC--CCchHH
Confidence 554321 1000112333334444442 1111111100111112233 2334444331 368999975 456788
Q ss_pred HHHHHHhcCC--CCCeEEEEeccC
Q 021235 236 GLSLGSWLGT--LKAKVHAFSVCD 257 (315)
Q Consensus 236 Gl~~~~k~~~--~~~rVigV~~~g 257 (315)
|+..++++.+ .++.|+|++-..
T Consensus 202 g~~~al~~~Gip~dv~vig~D~~~ 225 (325)
T 2x7x_A 202 GAYQAAKMAGREKEMIFVGIDALP 225 (325)
T ss_dssp HHHHHHHHTTCTTSSEEEEEECCC
T ss_pred HHHHHHHHcCCCCCeEEEEECCCc
Confidence 9999998876 368899998764
No 303
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=37.90 E-value=2.1e+02 Score=25.16 Aligned_cols=32 Identities=16% Similarity=0.200 Sum_probs=25.7
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEecCC
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 130 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~ 130 (315)
|+..|+ +|.-|.+++......|.+++++.+..
T Consensus 13 IlVtGa-tG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 13 VLIAGA-TGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp EEEECT-TSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred EEEECC-CcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 444454 58999999999999999999888764
No 304
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=37.84 E-value=1.6e+02 Score=25.19 Aligned_cols=31 Identities=16% Similarity=0.160 Sum_probs=22.6
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
+++..|+ +|.-|.++|..-.+.|.+++++.+
T Consensus 8 ~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r 38 (280)
T 1xkq_A 8 TVIITGS-SNGIGRTTAILFAQEGANVTITGR 38 (280)
T ss_dssp EEEETTC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECC-CChHHHHHHHHHHHCCCEEEEEeC
Confidence 3443454 468899999999999998777654
No 305
>2okg_A Central glycolytic gene regulator; alpha/beta/alpha sandwich, rossmann-like fold, structural genomics, PSI-2, protein structure initiative; HET: MSE G3H; 1.65A {Bacillus subtilis} SCOP: c.124.1.8 PDB: 3bxe_A* 3bxf_A* 3bxg_A* 3bxh_A*
Probab=37.15 E-value=1.8e+02 Score=25.17 Aligned_cols=95 Identities=9% Similarity=0.010 Sum_probs=48.0
Q ss_pred HHHHHHHh-C-CCcEEeCCCCCchh-hHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeE
Q 021235 174 LKEKLLKE-G-RRPYVIPVGGSNSI-GTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKV 250 (315)
Q Consensus 174 ~~~~l~~~-~-~~~y~ip~g~~n~~-~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rV 250 (315)
+.+++++. + ...+++|....+.. ....-...+.++..+.- + +.-++++++|.|..+++..+....+..++
T Consensus 12 Le~~L~~~fgL~~viVv~~~~~~~~~~~~~l~~~aA~~l~~~l------~-~~~viGla~G~T~~~~~~~l~~~~~~~~v 84 (255)
T 2okg_A 12 LEKTLKERLNLKDAIIVSGDSDQSPWVKKEMGRAAVACMKKRF------S-GKNIVAVTGGTTIEAVAEMMTPDSKNREL 84 (255)
T ss_dssp HHHHHHHHSCCSEEEEESSCTTTCTHHHHHHHHHHHHHHHHHC------C-SEEEEEECCSHHHHHHHHHCCCCTTCCEE
T ss_pred HHHHHHHHhCCCeEEEECCCCCchhHHHHHHHHHHHHHHHHhC------C-CCCEEEECCcHHHHHHHHhhccccCCCCC
Confidence 34455554 2 34677775332221 11222233334444331 2 35578999999999999999753122234
Q ss_pred EEEeccCC-----chhhHHHHHHHHhhhcC
Q 021235 251 HAFSVCDD-----PDYFYDYTQGLLDGLNA 275 (315)
Q Consensus 251 igV~~~g~-----~~~~~~~i~~l~~g~~~ 275 (315)
..|+..|. ..+-..-..+|++.++.
T Consensus 85 ~~v~L~ggl~~~~~~~~~~~~~~la~~~~~ 114 (255)
T 2okg_A 85 LFVPARGGLGEDVKNQANTICAHMAEKASG 114 (255)
T ss_dssp EEEESEEECC---CCHHHHHHHHHHHHHTC
T ss_pred EEEECCCCCCCCcccCHHHHHHHHHHHHCC
Confidence 44444332 22222234556666665
No 306
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=37.12 E-value=1.9e+02 Score=24.36 Aligned_cols=31 Identities=10% Similarity=-0.083 Sum_probs=22.7
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
+++..|+ +|.-|.++|....+.|.+++++.+
T Consensus 16 ~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r 46 (260)
T 2zat_A 16 VALVTAS-TDGIGLAIARRLAQDGAHVVVSSR 46 (260)
T ss_dssp EEEESSC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3443454 478899999999999998777654
No 307
>2h4a_A YRAM (HI1655); perplasmic binding protein, lipoprotein; 1.35A {Haemophilus influenzae} PDB: 3ckm_A
Probab=37.07 E-value=2.3e+02 Score=25.30 Aligned_cols=38 Identities=11% Similarity=-0.170 Sum_probs=27.9
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccC
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCD 257 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g 257 (315)
.++|.||++ |.+.-++-+...++..+.+++|++-.-..
T Consensus 174 ~~pDaV~~~-~~~~~~~~i~~~~~~~g~~~pl~~~~~~~ 211 (325)
T 2h4a_A 174 SNTTALYAV-ASPTELAEXKGYLTNIVPNLAIYASSRAS 211 (325)
T ss_dssp TCCCEEEEC-CCHHHHHHHHHHHTTTCTTCEEEECGGGC
T ss_pred CCCCEEEEe-CCHHHHhhhhhhHhhcCCCCCEEEecccc
Confidence 469999997 45555665666667778899999876655
No 308
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=36.97 E-value=2.2e+02 Score=25.09 Aligned_cols=146 Identities=13% Similarity=0.090 Sum_probs=74.6
Q ss_pred HHHHHH-cCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCC--C-------CCc----cchHHHHHhCCC
Q 021235 87 MADAVA-QGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQ--D-------PGL----IGNLLVERLVGA 152 (315)
Q Consensus 87 l~~a~~-~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~--~-------p~~----~~n~~~~r~~GA 152 (315)
+.+..+ .+++.|| |..++....+++-.+.+.+++.+............ . +.. ..-...+..+|.
T Consensus 63 ~~~li~~~~v~~ii--G~~~s~~~~a~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~ 140 (375)
T 3i09_A 63 AREWMDRGGLDLLV--GGTNSATALSMNQVAAEKKKVYINIGAGADTLTNEQCTPYTVHYAYDTMALAKGTGSAVVKQGG 140 (375)
T ss_dssp HHHHHHHSCEEEEE--ECSCHHHHHHHHHHHHHHTCEEEECSCCCGGGGTTTCCTTEEECSCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhhCCCEEEE--CCCCcHHHHHHHHHHHHcCceEEEeCCCchhhhcccCCCcEEEeeCChHHHHHHHHHHHHHcCC
Confidence 333444 6777666 44556778888999999999987763221111100 0 100 011233444565
Q ss_pred E-EEEEcC-CcccccChHHHHHHHHHHHHHhCCCc---EEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEe
Q 021235 153 H-IELISK-EEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVA 227 (315)
Q Consensus 153 e-V~~v~~-~~~~~~~~~~~~~~~~~~l~~~~~~~---y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~ 227 (315)
+ |.++.. ..|. ....+...+.+++.+... ..++.+..+. .....+|.+ .++|.||++
T Consensus 141 ~~vaii~~~~~~g----~~~~~~~~~~~~~~G~~v~~~~~~~~~~~d~------~~~l~~i~~--------~~~d~v~~~ 202 (375)
T 3i09_A 141 KTWFFLTADYAFG----KALEKNTADVVKANGGKVLGEVRHPLSASDF------SSFLLQAQS--------SKAQILGLA 202 (375)
T ss_dssp CEEEEEEESSHHH----HHHHHHHHHHHHHTTCEEEEEEEECTTCSCC------HHHHHHHHH--------TCCSEEEEE
T ss_pred ceEEEEecccHHH----HHHHHHHHHHHHHcCCEEeeeeeCCCCCccH------HHHHHHHHh--------CCCCEEEEe
Confidence 4 544432 2221 123344445555554322 1234332221 122223322 358998885
Q ss_pred CCchhhHHHHHHHHhcCCCCCe--EEEE
Q 021235 228 CGSGGTIAGLSLGSWLGTLKAK--VHAF 253 (315)
Q Consensus 228 vGtGGt~aGl~~~~k~~~~~~r--VigV 253 (315)
+.+..+.++.+.+++.+.+.+ |+|.
T Consensus 203 -~~~~~~~~~~~~~~~~g~~~~~~i~g~ 229 (375)
T 3i09_A 203 -NAGGDTVNAIKAAKEFGITKTMKLAAL 229 (375)
T ss_dssp -CCHHHHHHHHHHHHHTTGGGTCEEEES
T ss_pred -cCchhHHHHHHHHHHcCCCcCceEEec
Confidence 556678889999988776554 5553
No 309
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=36.82 E-value=1.9e+02 Score=25.26 Aligned_cols=31 Identities=23% Similarity=0.180 Sum_probs=22.4
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
+++..|+ +|.-|+++|..-.+.|.+++++.+
T Consensus 28 ~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r 58 (297)
T 1xhl_A 28 SVIITGS-SNGIGRSAAVIFAKEGAQVTITGR 58 (297)
T ss_dssp EEEETTC-SSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3444454 468899999988889988777654
No 310
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=36.76 E-value=2e+02 Score=24.46 Aligned_cols=36 Identities=17% Similarity=0.107 Sum_probs=28.5
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEecc
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVC 256 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~~ 256 (315)
.++|+||+. +..++.|+..++++.+. ++.|+|++-.
T Consensus 194 ~~~~ai~~~--~d~~A~g~~~al~~~G~~vP~di~vvg~D~~ 233 (289)
T 2fep_A 194 KKPTAILSA--TDEMALGIIHAAQDQGLSIPEDLDIIGFDNT 233 (289)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEECC
T ss_pred CCCCEEEEC--CHHHHHHHHHHHHHcCCCCCCCeEEEEECCh
Confidence 468999974 66788899999998763 5789998864
No 311
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=36.68 E-value=66 Score=23.16 Aligned_cols=30 Identities=13% Similarity=0.055 Sum_probs=21.9
Q ss_pred EEEecCCchhHHHHHHHHHHHHcC-CeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLN-LDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lG-l~~~ivvp 128 (315)
+|+..|+ |..|.+++......| .+++++-+
T Consensus 7 ~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r 37 (118)
T 3ic5_A 7 NICVVGA--GKIGQMIAALLKTSSNYSVTVADH 37 (118)
T ss_dssp EEEEECC--SHHHHHHHHHHHHCSSEEEEEEES
T ss_pred eEEEECC--CHHHHHHHHHHHhCCCceEEEEeC
Confidence 3444554 899999999999999 66555543
No 312
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=36.66 E-value=44 Score=26.58 Aligned_cols=31 Identities=19% Similarity=0.244 Sum_probs=25.3
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEecCC
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 130 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~ 130 (315)
|+..|| |-.|..+|...+++|++++++-+..
T Consensus 4 vvIIGg--G~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 4 VIVVGG--GPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred EEEECC--CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 444566 7899999999999999999986543
No 313
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=36.64 E-value=1.8e+02 Score=23.98 Aligned_cols=29 Identities=10% Similarity=0.132 Sum_probs=21.9
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
++..|+ +|--|.++|....+.|.++++..
T Consensus 4 vlVTGa-sggiG~~la~~l~~~G~~v~~~~ 32 (244)
T 1edo_A 4 VVVTGA-SRGIGKAIALSLGKAGCKVLVNY 32 (244)
T ss_dssp EEETTC-SSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEeCC-CchHHHHHHHHHHHCCCEEEEEc
Confidence 443454 47889999999999999887754
No 314
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=36.61 E-value=44 Score=28.49 Aligned_cols=38 Identities=11% Similarity=0.011 Sum_probs=28.1
Q ss_pred CeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCc
Q 021235 222 DDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDP 259 (315)
Q Consensus 222 D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~ 259 (315)
..+=+++|+|....-++...+..++..+|+||+.....
T Consensus 84 ~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~ 121 (236)
T 2bm8_A 84 TIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSR 121 (236)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTT
T ss_pred EEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHH
Confidence 45667888888877776665445678899999997653
No 315
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=36.60 E-value=1.3e+02 Score=28.90 Aligned_cols=29 Identities=14% Similarity=0.006 Sum_probs=23.0
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
|-..|. |+.|.++|...+..|++++++-+
T Consensus 7 IgiIGl--G~MG~~lA~~L~~~G~~V~v~dr 35 (484)
T 4gwg_A 7 IALIGL--AVMGQNLILNMNDHGFVVCAFNR 35 (484)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEECS
T ss_pred EEEECh--hHHHHHHHHHHHHCCCEEEEEeC
Confidence 333454 89999999999999999887743
No 316
>3lqy_A Putative isochorismatase hydrolase; structural genomics, PSI-2, PROT structure initiative, midwest center for structural genomic; 1.75A {Oleispira antarctica} SCOP: c.33.1.0
Probab=36.51 E-value=50 Score=27.31 Aligned_cols=41 Identities=17% Similarity=0.272 Sum_probs=30.2
Q ss_pred HHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCC
Q 021235 91 VAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 131 (315)
Q Consensus 91 ~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~ 131 (315)
+++|.++||.+|-....=-.++|.-|..+|++++++-+...
T Consensus 109 ~~~gi~~lii~G~~T~~CV~~Ta~da~~~Gy~v~vv~Da~~ 149 (190)
T 3lqy_A 109 DDAGIKKLVIVGAMTHMAIDAVTRAAEDLGYECAVAHDACA 149 (190)
T ss_dssp HHC-CCEEEEEEECTTTHHHHHHHHHHHHTCEEEEEEEEEE
T ss_pred HhCCCCEEEEEecCcChHHHHHHHHHHHCCCEEEEechhhc
Confidence 45789999988654434445788899999999999887554
No 317
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=36.50 E-value=1.9e+02 Score=24.19 Aligned_cols=55 Identities=11% Similarity=0.079 Sum_probs=33.0
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
+++..|+ +|.-|.++|..-.+.|.+++++.+...... ......++..|.++..+.
T Consensus 9 ~vlITGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~------~~~~~~l~~~~~~~~~~~ 63 (261)
T 1gee_A 9 VVVITGS-STGLGKSMAIRFATEKAKVVVNYRSKEDEA------NSVLEEIKKVGGEAIAVK 63 (261)
T ss_dssp EEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCC-CChHHHHHHHHHHHCCCEEEEEcCCChHHH------HHHHHHHHhcCCceEEEE
Confidence 4444454 478999999999999999777765222100 111233445677766554
No 318
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=36.44 E-value=2.1e+02 Score=24.64 Aligned_cols=56 Identities=9% Similarity=-0.098 Sum_probs=35.8
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcC
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 159 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~ 159 (315)
++++..|+ +|--|.++|..-.+.|.+++++-+..... ......++..|.++..+..
T Consensus 34 k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~ 89 (275)
T 4imr_A 34 RTALVTGS-SRGIGAAIAEGLAGAGAHVILHGVKPGST-------AAVQQRIIASGGTAQELAG 89 (275)
T ss_dssp CEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSTTTT-------HHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHH-------HHHHHHHHhcCCeEEEEEe
Confidence 34443454 46889999999999999987776543211 1234455667877776654
No 319
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=36.27 E-value=1.3e+02 Score=24.79 Aligned_cols=31 Identities=26% Similarity=0.107 Sum_probs=22.5
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
.+|| |++ |.-|.++|....+.|.+++++.+.
T Consensus 5 vlIT-Gas-~gIG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 5 AVIT-GAS-RGIGEAIARALARDGYALALGARS 35 (235)
T ss_dssp EEEE-SCS-SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEE-CCC-cHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3454 544 678999999999999986666543
No 320
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=36.26 E-value=1.8e+02 Score=24.84 Aligned_cols=39 Identities=13% Similarity=0.086 Sum_probs=23.0
Q ss_pred CcEEeCCCCCch-hhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCch
Q 021235 184 RPYVIPVGGSNS-IGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSG 231 (315)
Q Consensus 184 ~~y~ip~g~~n~-~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtG 231 (315)
+..+++.+-+++ ... ..+..++.++. +.+|.||..+|..
T Consensus 63 ~~~~~~~Dl~~~~~~v---~~~~~~~~~~~------g~iD~lv~nAg~~ 102 (311)
T 3o26_A 63 NVVFHQLDVTDPIATM---SSLADFIKTHF------GKLDILVNNAGVA 102 (311)
T ss_dssp SEEEEECCTTSCHHHH---HHHHHHHHHHH------SSCCEEEECCCCC
T ss_pred ceEEEEccCCCcHHHH---HHHHHHHHHhC------CCCCEEEECCccc
Confidence 344555444444 322 23555666655 3689999999975
No 321
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=36.17 E-value=2e+02 Score=24.35 Aligned_cols=36 Identities=14% Similarity=0.064 Sum_probs=28.4
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEecc
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVC 256 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~~ 256 (315)
.++|+||+. +...+.|+..++++.+. ++.|+|++-.
T Consensus 184 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d~~ 223 (290)
T 3clk_A 184 TDLTGIIAA--SDMTAIGILNQASSFGIEVPKDLSIVSIDGT 223 (290)
T ss_dssp CCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEECC
T ss_pred CCCcEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEEeCCh
Confidence 468999974 56788899999998763 5779998754
No 322
>3oqp_A Putative isochorismatase; catalytic triad, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; 1.22A {Burkholderia xenovorans}
Probab=36.14 E-value=51 Score=28.00 Aligned_cols=40 Identities=15% Similarity=0.199 Sum_probs=31.1
Q ss_pred HHcCCCEEEecCCchhHHH-HHHHHHHHHcCCeEEEEecCCC
Q 021235 91 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSK 131 (315)
Q Consensus 91 ~~~G~~~vVt~g~s~GNhg-~alA~aa~~lGl~~~ivvp~~~ 131 (315)
.+.|+++||.+|- ..|.| .++|.-|..+|++++++-+...
T Consensus 105 ~~~gi~~lvi~G~-~T~~CV~~Ta~dA~~~Gy~V~vv~Da~a 145 (211)
T 3oqp_A 105 AARQIDTLTVTGY-MTHNCDASTINHAVHSGLAVEFLHDATG 145 (211)
T ss_dssp HTTTCCEEEEEEE-CTTTHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred HhCCCCEEEEEee-ccCHHHHHHHHHHHHCCCeEEEechhee
Confidence 4578999998864 45555 5788899999999999887544
No 323
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=36.10 E-value=1.9e+02 Score=24.23 Aligned_cols=37 Identities=16% Similarity=0.180 Sum_probs=28.1
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEeccC
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVCD 257 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~~g 257 (315)
.++|+||+. +...+.|+..++++.+. ++.|+|++-..
T Consensus 199 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d~~~ 239 (296)
T 3brq_A 199 AKFSALVAS--NDDMAIGAMKALHERGVAVPEQVSVIGFDDIA 239 (296)
T ss_dssp -CCSEEEES--SHHHHHHHHHHHHHHTCCTTTTCEEEEESCCT
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEeecCch
Confidence 468999975 56778899999988663 57799987653
No 324
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=35.99 E-value=2.2e+02 Score=24.74 Aligned_cols=31 Identities=32% Similarity=0.291 Sum_probs=22.3
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
..||| |++ |--|.++|..-.+.|.+++++..
T Consensus 51 ~vlVT-Gas-~GIG~aia~~la~~G~~V~~~~~ 81 (294)
T 3r3s_A 51 KALVT-GGD-SGIGRAAAIAYAREGADVAINYL 81 (294)
T ss_dssp EEEEE-TTT-SHHHHHHHHHHHHTTCEEEEECC
T ss_pred EEEEe-CCC-cHHHHHHHHHHHHCCCEEEEEeC
Confidence 34555 543 67889999988899998776643
No 325
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=35.92 E-value=1.7e+02 Score=24.71 Aligned_cols=31 Identities=23% Similarity=0.200 Sum_probs=21.7
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
..||| |++ |--|.++|..-.+.|.+++++-+
T Consensus 14 ~vlVT-Gas-~gIG~aia~~l~~~G~~V~~~~r 44 (252)
T 3f1l_A 14 IILVT-GAS-DGIGREAAMTYARYGATVILLGR 44 (252)
T ss_dssp EEEEE-STT-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEe-CCC-ChHHHHHHHHHHHCCCEEEEEeC
Confidence 34454 543 67888888888888988766643
No 326
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=35.72 E-value=1.6e+02 Score=27.46 Aligned_cols=60 Identities=17% Similarity=0.024 Sum_probs=38.3
Q ss_pred CCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccc-hHHHHHhCCCEEEE
Q 021235 95 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIG-NLLVERLVGAHIEL 156 (315)
Q Consensus 95 ~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~-n~~~~r~~GAeV~~ 156 (315)
...|+..|| |+.|.-+|...+++|.+++++.+........++.... -...++..|.+++.
T Consensus 147 ~~~vvViGg--G~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~ 207 (437)
T 4eqs_A 147 VDKVLVVGA--GYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRL 207 (437)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEE
T ss_pred CcEEEEECC--ccchhhhHHHHHhcCCcceeeeeeccccccccchhHHHHHHHhhccceEEEe
Confidence 356666676 8999999999999999999997654322111222111 13445566666543
No 327
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=35.64 E-value=1.8e+02 Score=23.86 Aligned_cols=30 Identities=13% Similarity=0.024 Sum_probs=22.0
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
+++..|+ +|.-|.++|....+.|.+++++.
T Consensus 3 ~vlITGa-sggiG~~~a~~l~~~G~~v~~~~ 32 (245)
T 2ph3_A 3 KALITGA-SRGIGRAIALRLAEDGFALAIHY 32 (245)
T ss_dssp EEEETTT-TSHHHHHHHHHHHTTTCEEEEEE
T ss_pred EEEEeCC-CchHHHHHHHHHHHCCCEEEEEc
Confidence 3444454 47899999998888998877763
No 328
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=35.61 E-value=1.4e+02 Score=24.93 Aligned_cols=39 Identities=10% Similarity=0.051 Sum_probs=22.0
Q ss_pred HHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 87 MADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 87 l~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
.....++|.+.+++ +- .......++...+..|.++..+.
T Consensus 22 a~~l~~~G~~v~~~-~r-~~~~~~~~~~~~~~~~~~~~~~~ 60 (247)
T 3lyl_A 22 AHALASKGATVVGT-AT-SQASAEKFENSMKEKGFKARGLV 60 (247)
T ss_dssp HHHHHHTTCEEEEE-ES-SHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHCCCEEEEE-eC-CHHHHHHHHHHHHhcCCceEEEE
Confidence 34445678664443 22 23445566666677787776654
No 329
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=35.61 E-value=62 Score=28.60 Aligned_cols=64 Identities=16% Similarity=0.028 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHHHHH-cC----CCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCC
Q 021235 78 NKVRKLEFLMADAVA-QG----ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGA 152 (315)
Q Consensus 78 ~K~R~l~~ll~~a~~-~G----~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GA 152 (315)
+-.-.+++.+..+++ .+ -++|...|. |+-|+++|..++.+|++.+++-+.. .+....+.+|+
T Consensus 133 ~~~svae~a~~~~l~~~~~~l~g~~v~IiG~--G~iG~~~a~~l~~~G~~V~~~dr~~-----------~~~~~~~~~g~ 199 (293)
T 3d4o_A 133 NSIPTAEGTIMMAIQHTDFTIHGANVAVLGL--GRVGMSVARKFAALGAKVKVGARES-----------DLLARIAEMGM 199 (293)
T ss_dssp HHHHHHHHHHHHHHHHCSSCSTTCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESSH-----------HHHHHHHHTTS
T ss_pred ccHhHHHHHHHHHHHhcCCCCCCCEEEEEee--CHHHHHHHHHHHhCCCEEEEEECCH-----------HHHHHHHHCCC
Confidence 444445555555543 22 145655664 8999999999999999766553321 12334456787
Q ss_pred EE
Q 021235 153 HI 154 (315)
Q Consensus 153 eV 154 (315)
++
T Consensus 200 ~~ 201 (293)
T 3d4o_A 200 EP 201 (293)
T ss_dssp EE
T ss_pred ee
Confidence 64
No 330
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=35.51 E-value=96 Score=27.62 Aligned_cols=50 Identities=18% Similarity=0.186 Sum_probs=30.3
Q ss_pred CEEEecCCchhHHHHHHHHHHHH-cCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKY-LNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~-lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
++|+..|+ |--|...+..+++ .|.+.+.+-.. ..|..+.+.+||+.++-.
T Consensus 165 ~~VlV~Ga--G~~g~~a~~~a~~~~g~~Vi~~~~~-----------~~r~~~~~~~Ga~~~i~~ 215 (348)
T 4eez_A 165 DWQVIFGA--GGLGNLAIQYAKNVFGAKVIAVDIN-----------QDKLNLAKKIGADVTINS 215 (348)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTSCCEEEEEESC-----------HHHHHHHHHTTCSEEEEC
T ss_pred CEEEEEcC--CCccHHHHHHHHHhCCCEEEEEECc-----------HHHhhhhhhcCCeEEEeC
Confidence 45555554 4445555555655 46666555332 136889999999876643
No 331
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=35.47 E-value=1.9e+02 Score=24.11 Aligned_cols=32 Identities=19% Similarity=0.127 Sum_probs=22.7
Q ss_pred EEEecCCchhHHHHHHHHHHHH-cCCeEEEEecC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKY-LNLDCYLILRT 129 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~-lGl~~~ivvp~ 129 (315)
+++..|+ +|--|.++|..-.+ .|.+++++.+.
T Consensus 6 ~vlITGa-sggIG~~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 6 VALVTGG-NKGIGLAIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp EEEESSC-SSHHHHHHHHHHHHHSSSEEEEEESS
T ss_pred EEEEeCC-CcHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 3444454 47789999988888 89987776543
No 332
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=35.27 E-value=1.9e+02 Score=23.93 Aligned_cols=31 Identities=26% Similarity=0.164 Sum_probs=21.8
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
+++..|+ +|--|.++|..-.+.|.+++++-+
T Consensus 16 ~vlITGa-s~gIG~~ia~~l~~~G~~V~~~~r 46 (247)
T 3i1j_A 16 VILVTGA-ARGIGAAAARAYAAHGASVVLLGR 46 (247)
T ss_dssp EEEESST-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCC-CChHHHHHHHHHHHCCCEEEEEec
Confidence 3443454 478899999888888988766643
No 333
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=35.07 E-value=57 Score=29.69 Aligned_cols=56 Identities=14% Similarity=0.020 Sum_probs=37.6
Q ss_pred EEEecCC-chhHHHHHHHHHHHHc-CCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 97 CIITIGG-IQSNHCRAAAVAAKYL-NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 97 ~vVt~g~-s~GNhg~alA~aa~~l-Gl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
+|..+|- ..+|.+++++.+++++ |++++++.|+.-. |. ..-+..++..|+++..+.
T Consensus 156 ~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~-----~~-~~~~~~~~~~g~~~~~~~ 213 (310)
T 3csu_A 156 HVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALA-----MP-QYILDMLDEKGIAWSLHS 213 (310)
T ss_dssp EEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGC-----CC-HHHHHHHHHTTCCEEECS
T ss_pred EEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccc-----cC-HHHHHHHHHcCCeEEEEc
Confidence 4444453 2479999999999999 9999999987642 11 112345566777765544
No 334
>3mcw_A Putative hydrolase; isochorismatase family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.06A {Chromobacterium violaceum}
Probab=34.96 E-value=56 Score=27.25 Aligned_cols=62 Identities=21% Similarity=0.103 Sum_probs=40.3
Q ss_pred CCeEEEEeCCCCCCCCchhHHHHHHHHHHHHHHcCCCEEEecCCchhHHH-HHHHHHHHHcCCeEEEEecCCC
Q 021235 60 NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSK 131 (315)
Q Consensus 60 g~~v~vKrEdl~~~~~gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg-~alA~aa~~lGl~~~ivvp~~~ 131 (315)
+-.++-|.- . ++|..-.+..+| +++|.++||.+|- ..|.| .++|..|..+|++++++.+...
T Consensus 87 ~~~vi~K~~-~-----saF~~t~L~~~L---~~~gi~~lvi~G~-~T~~CV~~Ta~da~~~Gy~v~vv~Da~~ 149 (198)
T 3mcw_A 87 GETVIAKQT-N-----SAFIGTGLEALL---RANGWLELVVAGV-STSNSVEATVRMAGNLGFAVCLAEDGCF 149 (198)
T ss_dssp TCEEEEESS-S-----STTTTSSHHHHH---HHHTCCEEEEEEE-CTTTHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CCEEEEcCc-c-----CccccchHHHHH---HcCCCCeEEEEEc-CcChHHHHHHHHHHHCCCEEEEeCcccc
Confidence 446677753 2 333222343333 3568999998764 45555 4788889999999999887554
No 335
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=34.96 E-value=1.7e+02 Score=25.56 Aligned_cols=32 Identities=16% Similarity=0.224 Sum_probs=23.4
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
+++..|+ +|--|.++|..-.+.|.+++++-+.
T Consensus 43 ~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~ 74 (293)
T 3rih_A 43 SVLVTGG-TKGIGRGIATVFARAGANVAVAARS 74 (293)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEeCC-CcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4444454 4678999999999999988777544
No 336
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=34.69 E-value=2.2e+02 Score=24.48 Aligned_cols=30 Identities=23% Similarity=0.038 Sum_probs=22.1
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
.||| |++ |--|.++|..-.+.|.+++++-+
T Consensus 28 ~lVT-Gas-~GIG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 28 AVIT-GST-SGIGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp EEEE-TCS-SHHHHHHHHHHHHTTCEEEEECC
T ss_pred EEEe-CCC-cHHHHHHHHHHHHCCCEEEEEeC
Confidence 3454 544 67899999999999998776644
No 337
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=34.58 E-value=89 Score=26.78 Aligned_cols=10 Identities=40% Similarity=0.743 Sum_probs=5.4
Q ss_pred CCCEEEEEcC
Q 021235 150 VGAHIELISK 159 (315)
Q Consensus 150 ~GAeV~~v~~ 159 (315)
.|++.+.|++
T Consensus 179 ~Gad~iVVGR 188 (222)
T 4dbe_A 179 AGADYEIIGR 188 (222)
T ss_dssp HTCSEEEECH
T ss_pred cCCCEEEECH
Confidence 4555555554
No 338
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=34.51 E-value=1.6e+02 Score=25.50 Aligned_cols=11 Identities=0% Similarity=-0.239 Sum_probs=7.8
Q ss_pred CCCeEEEEecc
Q 021235 246 LKAKVHAFSVC 256 (315)
Q Consensus 246 ~~~rVigV~~~ 256 (315)
..++|..|.+.
T Consensus 187 ~gI~vn~v~PG 197 (285)
T 3sc4_A 187 AGIASNTLWPR 197 (285)
T ss_dssp GTCEEEEEECS
T ss_pred cCcEEEEEeCC
Confidence 35788888775
No 339
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=34.15 E-value=97 Score=28.39 Aligned_cols=37 Identities=8% Similarity=-0.145 Sum_probs=28.4
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCC----CCCeEEEEeccC
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGT----LKAKVHAFSVCD 257 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~----~~~rVigV~~~g 257 (315)
.++|+|||. +...+.|+..++++.+ .++.|+|++-..
T Consensus 202 ~~~~aI~~~--nD~~A~g~~~al~~~G~~vP~disvig~D~~~ 242 (412)
T 4fe7_A 202 PPQTGIIAV--TDARARHILQVCEHLHIPVPEKLCVIGIDNEE 242 (412)
T ss_dssp CTTEEEEES--SHHHHHHHHHHHHHHTCCTTTTSEEEESSCCS
T ss_pred CCCeEEEEE--ecHHHHHHHHHHHHcCCCCCceEEEEeecchh
Confidence 468999875 5677889999998865 368899988653
No 340
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=34.07 E-value=2.1e+02 Score=24.07 Aligned_cols=31 Identities=19% Similarity=-0.011 Sum_probs=22.1
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
+++..|++ |--|+++|....+.|.+++++.+
T Consensus 6 ~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r 36 (260)
T 1x1t_A 6 VAVVTGST-SGIGLGIATALAAQGADIVLNGF 36 (260)
T ss_dssp EEEETTCS-SHHHHHHHHHHHHTTCEEEEECC
T ss_pred EEEEeCCC-cHHHHHHHHHHHHcCCEEEEEeC
Confidence 34444554 67899999999999988766643
No 341
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=34.04 E-value=66 Score=29.37 Aligned_cols=57 Identities=12% Similarity=-0.018 Sum_probs=37.5
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccch--HHHHHhCCCEEEEEcCC
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGN--LLVERLVGAHIELISKE 160 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n--~~~~r~~GAeV~~v~~~ 160 (315)
++|+|++.| -...++-..|+..|.++.+++.++.|. ..|. ...+...|-.+.++.+.
T Consensus 123 ~~ILTh~~S--~tv~~~l~~A~~~gk~~~V~v~EsrP~------~qG~~la~~L~~~gI~vtli~Ds 181 (315)
T 3ecs_A 123 ATILTHAYS--RVVLRVLEAAVAAKKRFSVYVTESQPD------LSGKKMAKALCHLNVPVTVVLDA 181 (315)
T ss_dssp EEEEECSCC--HHHHHHHHHHHTTTCCEEEEEECCTTT------THHHHHHHHHHTTTCCEEEECGG
T ss_pred CEEEEcCCc--HHHHHHHHHHHHcCCeEEEEEecCCCc------chHHHHHHHHHHcCCCEEEEehh
Confidence 467887643 355555566777899999999888753 1233 33455668888887753
No 342
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=33.96 E-value=2.2e+02 Score=24.14 Aligned_cols=156 Identities=11% Similarity=0.030 Sum_probs=76.2
Q ss_pred HHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCc----ccCCCCCccch--HHHHHhCCC-EEEEEc
Q 021235 86 LMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKV----LVDQDPGLIGN--LLVERLVGA-HIELIS 158 (315)
Q Consensus 86 ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~----~~~~~p~~~~n--~~~~r~~GA-eV~~v~ 158 (315)
++.....++++.||..+... + . .....++..|++++++-..... ....+....+. ...+...|. +|.++.
T Consensus 59 ~~~~l~~~~vdgiIi~~~~~-~-~-~~~~~l~~~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~ 135 (290)
T 2rgy_A 59 AVRFLIGRDCDGVVVISHDL-H-D-EDLDELHRMHPKMVFLNRAFDALPDASFCPDHRRGGELAAATLIEHGHRKLAVIS 135 (290)
T ss_dssp HHHHHHHTTCSEEEECCSSS-C-H-HHHHHHHHHCSSEEEESSCCTTSGGGEECCCHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHhcCccEEEEecCCC-C-H-HHHHHHhhcCCCEEEEccccCCCCCCEEEeCcHHHHHHHHHHHHHCCCceEEEEe
Confidence 35556678899988764322 2 1 2223345679998776432111 00000000011 122233464 455554
Q ss_pred CCcccccChHHHHHHHHHHHHHhCCC---cEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHH
Q 021235 159 KEEYSKIGSVTLTNILKEKLLKEGRR---PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIA 235 (315)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~l~~~~~~---~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~a 235 (315)
... ......++.+-..+.+++.+.. .+++. +..+. ..|+ ....++.++- .++|+||+ .+..++.
T Consensus 136 ~~~-~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~-~~~~~--~~~~-~~~~~~l~~~------~~~~ai~~--~~d~~A~ 202 (290)
T 2rgy_A 136 GPF-TASDNVERLDGFFDELARHGIARDSVPLIE-SDFSP--EGGY-AATCQLLESK------APFTGLFC--ANDTMAV 202 (290)
T ss_dssp SCT-TCHHHHHHHHHHHHHHHTTTCCGGGSCEEE-CCSSH--HHHH-HHHHHHHHHT------CCCSEEEE--SSHHHHH
T ss_pred CCC-CCccHHHHHHHHHHHHHHcCCCCCcccEEe-cCCCh--hHHH-HHHHHHHhCC------CCCcEEEE--CCcHHHH
Confidence 321 1001112333344445544321 11222 11122 2333 2344554432 46899996 5667889
Q ss_pred HHHHHHhcCCC----CCeEEEEeccC
Q 021235 236 GLSLGSWLGTL----KAKVHAFSVCD 257 (315)
Q Consensus 236 Gl~~~~k~~~~----~~rVigV~~~g 257 (315)
|+..++++.+. ++.|+|++-..
T Consensus 203 g~~~al~~~G~~vP~di~vvg~D~~~ 228 (290)
T 2rgy_A 203 SALARFQQLGISVPGDVSVIGYDDDY 228 (290)
T ss_dssp HHHHHHHHTTCCTTTTCEEEEEECCT
T ss_pred HHHHHHHHcCCCCCCceEEEEeCCch
Confidence 99999998763 57899998654
No 343
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=33.82 E-value=2.2e+02 Score=24.29 Aligned_cols=32 Identities=22% Similarity=0.077 Sum_probs=22.6
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
..||| |+ +|--|.++|..-.+.|.+++++-+.
T Consensus 29 ~~lVT-Ga-s~GIG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4fc7_A 29 VAFIT-GG-GSGIGFRIAEIFMRHGCHTVIASRS 60 (277)
T ss_dssp EEEEE-TT-TSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred EEEEe-CC-CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 34555 54 3678889988888889887776543
No 344
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=33.66 E-value=31 Score=29.96 Aligned_cols=27 Identities=19% Similarity=0.246 Sum_probs=21.9
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEE
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLI 126 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~iv 126 (315)
|+..|| |=.|.+.|..++++|+++++|
T Consensus 7 vvIIG~--GpAGl~AA~~la~~g~~v~li 33 (314)
T 4a5l_A 7 VVIIGS--GPAAHTAAIYLGRSSLKPVMY 33 (314)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCCEEE
T ss_pred EEEECC--CHHHHHHHHHHHHCCCCEEEE
Confidence 333465 678999999999999998887
No 345
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=33.61 E-value=60 Score=30.47 Aligned_cols=48 Identities=19% Similarity=-0.005 Sum_probs=34.7
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
.+|+..|+ |.-|..+|..++.+|.+++++ +... .+...++.+|++.+.
T Consensus 185 ~kV~ViG~--G~iG~~aa~~a~~lGa~V~v~-D~~~----------~~l~~~~~lGa~~~~ 232 (381)
T 3p2y_A 185 ASALVLGV--GVAGLQALATAKRLGAKTTGY-DVRP----------EVAEQVRSVGAQWLD 232 (381)
T ss_dssp CEEEEESC--SHHHHHHHHHHHHHTCEEEEE-CSSG----------GGHHHHHHTTCEECC
T ss_pred CEEEEECc--hHHHHHHHHHHHHCCCEEEEE-eCCH----------HHHHHHHHcCCeEEe
Confidence 35666676 899999999999999975544 3221 246677889998654
No 346
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=33.43 E-value=1.8e+02 Score=24.09 Aligned_cols=55 Identities=13% Similarity=0.030 Sum_probs=33.2
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
+++..|+ +|--|.++|..-.+.|.+++++.+..... .......++..|.++..+.
T Consensus 9 ~vlVTGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~ 63 (258)
T 3afn_B 9 RVLITGS-SQGIGLATARLFARAGAKVGLHGRKAPAN------IDETIASMRADGGDAAFFA 63 (258)
T ss_dssp EEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCCTT------HHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCC-CChHHHHHHHHHHHCCCEEEEECCCchhh------HHHHHHHHHhcCCceEEEE
Confidence 3444454 47899999999999999977776541210 0111233445576766654
No 347
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=33.38 E-value=1.7e+02 Score=24.33 Aligned_cols=56 Identities=13% Similarity=-0.062 Sum_probs=36.4
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 159 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~ 159 (315)
+++..|++ +--|.++|..-.+.|.+++++........ ......++..|.++..+..
T Consensus 9 ~vlITGas-~gIG~~~a~~l~~~G~~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 64 (255)
T 3icc_A 9 VALVTGAS-RGIGRAIAKRLANDGALVAIHYGNRKEEA------EETVYEIQSNGGSAFSIGA 64 (255)
T ss_dssp EEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCSHHH------HHHHHHHHHTTCEEEEEEC
T ss_pred EEEEECCC-ChHHHHHHHHHHHCCCeEEEEeCCchHHH------HHHHHHHHhcCCceEEEec
Confidence 34434554 67899999999999998887655443211 1234556677888877654
No 348
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=33.37 E-value=1.5e+02 Score=28.33 Aligned_cols=60 Identities=17% Similarity=0.179 Sum_probs=38.0
Q ss_pred CCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccch-HHHHHhCCCEEEE
Q 021235 95 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGN-LLVERLVGAHIEL 156 (315)
Q Consensus 95 ~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n-~~~~r~~GAeV~~ 156 (315)
.+.|+..|+ |+.|.-+|...+++|.+++++.+........++..... ...++..|.+++.
T Consensus 151 ~~~vvViGg--G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~ 211 (565)
T 3ntd_A 151 VEHATVVGG--GFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRL 211 (565)
T ss_dssp CSEEEEECC--SHHHHHHHHHHHHTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhcCCcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEe
Confidence 356666776 89999999999999999999987653221111111111 2345667777653
No 349
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=33.10 E-value=1.7e+02 Score=24.62 Aligned_cols=53 Identities=11% Similarity=-0.104 Sum_probs=33.6
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 159 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~ 159 (315)
+++..|+ +|.-|.++|..-.+.|.+++++.+... ......++..|.++..+..
T Consensus 6 ~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~---------~~~~~~l~~~~~~~~~~~~ 58 (255)
T 2q2v_A 6 TALVTGS-TSGIGLGIAQVLARAGANIVLNGFGDP---------APALAEIARHGVKAVHHPA 58 (255)
T ss_dssp EEEESSC-SSHHHHHHHHHHHHTTCEEEEECSSCC---------HHHHHHHHTTSCCEEEECC
T ss_pred EEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCch---------HHHHHHHHhcCCceEEEeC
Confidence 3443454 478999999999999998777644321 1123445556777766653
No 350
>4h17_A Hydrolase, isochorismatase family; rossmann-like fold, structural genomics, joint center for ST genomics, JCSG; 1.60A {Pseudomonas putida KT2440}
Probab=33.08 E-value=62 Score=27.03 Aligned_cols=40 Identities=23% Similarity=0.239 Sum_probs=30.7
Q ss_pred HHcCCCEEEecCCchhHHH-HHHHHHHHHcCCeEEEEecCCC
Q 021235 91 VAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSK 131 (315)
Q Consensus 91 ~~~G~~~vVt~g~s~GNhg-~alA~aa~~lGl~~~ivvp~~~ 131 (315)
+++|.++||.+| ...|.| .++|.-|..+|++++++-+...
T Consensus 119 ~~~gi~~lvi~G-~~T~~CV~~Ta~da~~~Gy~V~vv~Da~a 159 (197)
T 4h17_A 119 QELGHLDLIVCG-FMSHSSVSTTVRRAKDYGYRCTLVEDASA 159 (197)
T ss_dssp HHHTCSEEEEEE-ECTTTHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred HhcCCCEEEEEe-eCcCHHHHHHHHHHHHCCCEEEEeCcccc
Confidence 456899999876 445655 4788889999999999887544
No 351
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=33.08 E-value=1.8e+02 Score=24.60 Aligned_cols=31 Identities=26% Similarity=0.168 Sum_probs=22.2
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
..||| |+ +|--|.++|....+.|.+++++-+
T Consensus 9 ~~lVT-Ga-s~GIG~aia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 9 LAIIT-GA-SQGIGAVIAAGLATDGYRVVLIAR 39 (250)
T ss_dssp EEEEE-ST-TSHHHHHHHHHHHHHTCEEEEEES
T ss_pred EEEEE-CC-CcHHHHHHHHHHHHCCCEEEEEEC
Confidence 34454 54 367889999888888998776644
No 352
>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural GE PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} SCOP: c.124.1.8
Probab=33.07 E-value=1.6e+02 Score=25.65 Aligned_cols=27 Identities=11% Similarity=-0.021 Sum_probs=19.7
Q ss_pred EEeCC-chhhHHHHHHHHhcCC--C-CCeEE
Q 021235 225 VVACG-SGGTIAGLSLGSWLGT--L-KAKVH 251 (315)
Q Consensus 225 vv~vG-tGGt~aGl~~~~k~~~--~-~~rVi 251 (315)
+++++ +|.|..+++..+.... + +++++
T Consensus 60 viGla~~G~T~~~~~~~l~~~~~~~~~v~~v 90 (264)
T 2r5f_A 60 HIGISSWSSTIRAMVSHMHPQPGKQSAQEVV 90 (264)
T ss_dssp EEEECTTCHHHHHHHHTCCC--CCCCCSEEE
T ss_pred EEEECcchHHHHHHHHhhccccCCCCCcEEE
Confidence 58889 9999999999886532 3 55554
No 353
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=33.00 E-value=2.3e+02 Score=24.13 Aligned_cols=30 Identities=17% Similarity=0.145 Sum_probs=22.6
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
||| |+ +|.-|+++|....+.|.+++++.+.
T Consensus 25 lVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r~ 54 (267)
T 1vl8_A 25 LVT-GG-SRGLGFGIAQGLAEAGCSVVVASRN 54 (267)
T ss_dssp EEE-TT-TSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEE-CC-CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 454 54 4789999999999999987776543
No 354
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=33.00 E-value=1.3e+02 Score=25.59 Aligned_cols=57 Identities=19% Similarity=0.131 Sum_probs=38.1
Q ss_pred cEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEec
Q 021235 185 PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSV 255 (315)
Q Consensus 185 ~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~ 255 (315)
.||--.|..|.. -...++.|=++.+ .+++||++.-+|-|+.-+...+ .+++|+.|.-
T Consensus 18 ~YF~~~G~eNT~---~tl~la~era~e~-------~Ik~iVVAS~sG~TA~k~~e~~----~~i~lVvVTh 74 (201)
T 1vp8_A 18 VYFNKPGRENTE---ETLRLAVERAKEL-------GIKHLVVASSYGDTAMKALEMA----EGLEVVVVTY 74 (201)
T ss_dssp EEESSCSGGGHH---HHHHHHHHHHHHH-------TCCEEEEECSSSHHHHHHHHHC----TTCEEEEEEC
T ss_pred EEecCCCcccHH---HHHHHHHHHHHHc-------CCCEEEEEeCCChHHHHHHHHh----cCCeEEEEeC
Confidence 455555544543 3334666666555 3889999999999996666544 4578888873
No 355
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=32.96 E-value=70 Score=31.07 Aligned_cols=54 Identities=17% Similarity=0.102 Sum_probs=31.9
Q ss_pred EEEecCCchhHHHHHHHHH--HHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEE
Q 021235 97 CIITIGGIQSNHCRAAAVA--AKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 155 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~a--a~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~ 155 (315)
-+|.|| ++-|-|-+++++ -+..|+++.+|++... . .++...++..++.+|..+.
T Consensus 55 v~VlcG-~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~-~---~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 55 FLVLCG-GGNNGGDGFVVARNLLGVVKDVLVVFLGKK-K---TPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp EEEEEC-SSHHHHHHHHHHHHHTTTSSEEEEEECCSS-C---CHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEC-CCCCHHHHHHHHHHHHHCCCeEEEEEECCC-C---CHHHHHHHHHHHhCCCcee
Confidence 445565 444444555444 4446999999987643 1 1112346777888887664
No 356
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=32.91 E-value=1e+02 Score=25.93 Aligned_cols=12 Identities=8% Similarity=-0.033 Sum_probs=8.3
Q ss_pred CCCeEEEEeccC
Q 021235 246 LKAKVHAFSVCD 257 (315)
Q Consensus 246 ~~~rVigV~~~g 257 (315)
.+++|..|.+..
T Consensus 186 ~gi~v~~v~pg~ 197 (260)
T 3awd_A 186 HGIRANAVAPTY 197 (260)
T ss_dssp GTEEEEEEEECC
T ss_pred cCeEEEEEEeee
Confidence 367888887753
No 357
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=32.87 E-value=58 Score=28.53 Aligned_cols=33 Identities=9% Similarity=-0.149 Sum_probs=26.2
Q ss_pred CCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEecc
Q 021235 220 KFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVC 256 (315)
Q Consensus 220 ~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~ 256 (315)
.+|+||+. ++.+..|+..++++.+ +.|+|++-.
T Consensus 181 ~~daI~~~--~D~~a~Gv~~a~~e~G--v~viG~D~~ 213 (296)
T 2hqb_A 181 QVDVFYPA--GDGYHVPVVEAIKDQG--DFAIGYVGD 213 (296)
T ss_dssp TCCEEECC--CTTTHHHHHHHHHHHT--CEEEEEESC
T ss_pred CCcEEEEC--CCCCCHHHHHHHHHcC--CEEEEEecc
Confidence 38988865 4566789999999876 899999874
No 358
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=32.78 E-value=50 Score=30.33 Aligned_cols=32 Identities=19% Similarity=0.225 Sum_probs=25.6
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
++|...|+ |..|+.+|.+|+++|++++++-+.
T Consensus 13 ~~IlIlG~--G~lg~~la~aa~~lG~~viv~d~~ 44 (377)
T 3orq_A 13 ATIGIIGG--GQLGKMMAQSAQKMGYKVVVLDPS 44 (377)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEEECC
Confidence 34555566 678999999999999999888653
No 359
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=32.67 E-value=38 Score=29.56 Aligned_cols=28 Identities=39% Similarity=0.388 Sum_probs=22.4
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLI 126 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~iv 126 (315)
|-+| .|| |=.|.+.|..++++|+++++|
T Consensus 8 DvvI-IG~--GpAGl~aA~~l~~~g~~V~li 35 (312)
T 4gcm_A 8 DIAI-IGA--GPAGMTAAVYASRANLKTVMI 35 (312)
T ss_dssp EEEE-ECC--SHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEE-ECC--CHHHHHHHHHHHHCCCCEEEE
Confidence 4344 465 667999999999999999888
No 360
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=32.60 E-value=2.3e+02 Score=24.01 Aligned_cols=31 Identities=16% Similarity=0.189 Sum_probs=22.0
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
+++..|++ |--|.++|....+.|.+++++.+
T Consensus 13 ~~lVTGas-~gIG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 13 AAVITGGA-RRIGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp EEEETTCS-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeC
Confidence 34444554 67899999888888888776654
No 361
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=32.54 E-value=2.3e+02 Score=24.07 Aligned_cols=32 Identities=9% Similarity=-0.033 Sum_probs=23.3
Q ss_pred EEEecCCc-hhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 97 CIITIGGI-QSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 97 ~vVt~g~s-~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
.||| |++ +|--|.++|....+.|.+++++.+.
T Consensus 9 vlVT-Gas~~~gIG~~~a~~l~~~G~~V~~~~r~ 41 (275)
T 2pd4_A 9 GLIV-GVANNKSIAYGIAQSCFNQGATLAFTYLN 41 (275)
T ss_dssp EEEE-CCCSTTSHHHHHHHHHHTTTCEEEEEESS
T ss_pred EEEE-CCCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 3454 654 2678999999999999987776543
No 362
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=32.45 E-value=56 Score=25.23 Aligned_cols=30 Identities=13% Similarity=0.154 Sum_probs=21.1
Q ss_pred CCEEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 95 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 95 ~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
.++|...|+ |+.|.++|...+..|++ +.+.
T Consensus 21 ~~~v~iiG~--G~iG~~~a~~l~~~g~~-v~v~ 50 (144)
T 3oj0_A 21 GNKILLVGN--GMLASEIAPYFSYPQYK-VTVA 50 (144)
T ss_dssp CCEEEEECC--SHHHHHHGGGCCTTTCE-EEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCE-EEEE
Confidence 355655664 88999888888888887 4443
No 363
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=32.33 E-value=42 Score=29.70 Aligned_cols=30 Identities=20% Similarity=0.020 Sum_probs=23.8
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
|+..|| |=.|.++|+.+++.|++++++=..
T Consensus 7 vvIIG~--G~~Gl~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 7 CIVIGA--GVVGLAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECC--CHHHHHHHHHHHhCCCeEEEEeCC
Confidence 444565 788999999999999998887443
No 364
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=32.24 E-value=45 Score=30.35 Aligned_cols=56 Identities=16% Similarity=0.064 Sum_probs=37.1
Q ss_pred EEEecCC-chhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 97 CIITIGG-IQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 97 ~vVt~g~-s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
+|...|- ..||.+++++.+++++|++++++.|+.-. |. ..-+..++..|+++....
T Consensus 157 ~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~-----~~-~~~~~~~~~~g~~~~~~~ 213 (308)
T 1ml4_A 157 KIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLR-----MP-RHIVEELREKGMKVVETT 213 (308)
T ss_dssp EEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGC-----CC-HHHHHHHHHTTCCEEEES
T ss_pred EEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCcccc-----CC-HHHHHHHHHcCCeEEEEc
Confidence 4444443 24799999999999999999999987542 11 112344556677765543
No 365
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=32.20 E-value=2.6e+02 Score=24.62 Aligned_cols=36 Identities=6% Similarity=-0.076 Sum_probs=28.8
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEecc
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVC 256 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~~ 256 (315)
.+||+|||. +..++.|+..++++.+. ++.|+|++-.
T Consensus 267 ~~~~ai~~~--nD~~A~g~~~al~~~G~~vP~disvigfD~~ 306 (366)
T 3h5t_A 267 PDLTAVLCT--VDALAFGVLEYLKSVGKSAPADLSLTGFDGT 306 (366)
T ss_dssp TTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEECC
T ss_pred CCCcEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEEECCC
Confidence 469999985 56788899999998873 6889999743
No 366
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=32.20 E-value=38 Score=30.78 Aligned_cols=29 Identities=17% Similarity=0.208 Sum_probs=23.0
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
|+..|| |=.|.++|+.+++.|++++++=.
T Consensus 7 VvIIGa--G~~Gl~~A~~La~~G~~V~vlE~ 35 (397)
T 2oln_A 7 VVVVGG--GPVGLATAWQVAERGHRVLVLER 35 (397)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEECC--CHHHHHHHHHHHHCCCeEEEEeC
Confidence 444566 78899999999999999777643
No 367
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=32.11 E-value=76 Score=28.07 Aligned_cols=31 Identities=13% Similarity=0.025 Sum_probs=23.9
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
++|...|. |+-|+++|..++.+|++.+++-+
T Consensus 158 ~~v~IiG~--G~iG~~~a~~l~~~G~~V~~~d~ 188 (300)
T 2rir_A 158 SQVAVLGL--GRTGMTIARTFAALGANVKVGAR 188 (300)
T ss_dssp SEEEEECC--SHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEcc--cHHHHHHHHHHHHCCCEEEEEEC
Confidence 45655665 89999999999999997666543
No 368
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=32.05 E-value=7.5e+02 Score=29.80 Aligned_cols=34 Identities=3% Similarity=-0.071 Sum_probs=26.3
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
++++..|+++|+-|+++|..-++.|.++++.-..
T Consensus 2137 KvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~ 2170 (3089)
T 3zen_D 2137 EVAVVTGASKGSIAASVVGQLLDGGATVIATTSR 2170 (3089)
T ss_dssp CEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3444447777779999999999999998887543
No 369
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=31.85 E-value=55 Score=29.59 Aligned_cols=48 Identities=15% Similarity=0.138 Sum_probs=31.7
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 155 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~ 155 (315)
++|+..|+ |.-|++.+..|+.+|.+.++++..+. .+.++++.++.+++
T Consensus 181 ~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~~----------~~~~~a~~l~~~~~ 228 (363)
T 3m6i_A 181 DPVLICGA--GPIGLITMLCAKAAGACPLVITDIDE----------GRLKFAKEICPEVV 228 (363)
T ss_dssp CCEEEECC--SHHHHHHHHHHHHTTCCSEEEEESCH----------HHHHHHHHHCTTCE
T ss_pred CEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCCH----------HHHHHHHHhchhcc
Confidence 44544554 78899999999999998555554332 25667777743444
No 370
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=31.79 E-value=2.4e+02 Score=23.94 Aligned_cols=198 Identities=11% Similarity=0.033 Sum_probs=94.8
Q ss_pred HHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcc-----cCCCCCccch--H-HHHHhC-CC-EE
Q 021235 85 FLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVL-----VDQDPGLIGN--L-LVERLV-GA-HI 154 (315)
Q Consensus 85 ~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~-----~~~~p~~~~n--~-~~~r~~-GA-eV 154 (315)
..+..+.+++++.||..+.. .+........++..|++++++-...... ...+....+. . .+.+.+ |. +|
T Consensus 52 ~~i~~l~~~~vdgiIi~~~~-~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~d~~~~g~~~~~~l~~~~~g~~~i 130 (305)
T 3g1w_A 52 TVLEQAIAKNPAGIAISAID-PVELTDTINKAVDAGIPIVLFDSGAPDSHAHSFLGTNNYNAGMNAAYKMAELLDGEGEV 130 (305)
T ss_dssp HHHHHHHHHCCSEEEECCSS-TTTTHHHHHHHHHTTCCEEEESSCCTTSCCSCEEECCHHHHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHhCCCEEEEcCCC-HHHHHHHHHHHHHCCCcEEEECCCCCCCceeEEECcCHHHHHHHHHHHHHHHhCCCcEE
Confidence 34566667889988876432 2322334455667899987775432210 0000000111 1 122222 54 35
Q ss_pred EEEcCCcccccChHHHHHHHHHHHHHhCCCcE--EeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchh
Q 021235 155 ELISKEEYSKIGSVTLTNILKEKLLKEGRRPY--VIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGG 232 (315)
Q Consensus 155 ~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y--~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGG 232 (315)
.++..... . ...++.+...+.+++.+...- .+..+..+. ..++ ....++.++- .++|+||+ .+..
T Consensus 131 ~~i~~~~~-~-~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~l~~~------~~~~ai~~--~~d~ 197 (305)
T 3g1w_A 131 AVITLPNQ-L-NHQERTTGFKETLEAEFPAIEVIAVEDGRGDS--LHSR-RVAHQLLEDY------PNLAGIFA--TEAN 197 (305)
T ss_dssp EEEECTTC-H-HHHHHHHHHHHHHHHHCTTEEEEEEEECTTCH--HHHH-HHHHHHHHHC------TTEEEEEE--SSHH
T ss_pred EEEeCCCc-c-cHHHHHHHHHHHHHhhCCCCEEEEEecCCCCH--HHHH-HHHHHHHHhC------CCceEEEE--CCCc
Confidence 55543221 1 112233444445555443321 121222222 2233 3344444432 35888886 4566
Q ss_pred hHHHHHHHHhcCCC--CCeEEEEeccCCchhhHHHHHHHHhhhcCCCCCCCeEEecCCcccchHHHHHHHHHhcCCC
Q 021235 233 TIAGLSLGSWLGTL--KAKVHAFSVCDDPDYFYDYTQGLLDGLNAGVDSRDIVNIQNVSVYMTFKNILMNILMNGKQ 307 (315)
Q Consensus 233 t~aGl~~~~k~~~~--~~rVigV~~~g~~~~~~~~i~~l~~g~~~~~~~~dvv~v~e~~~~~~~~~~~~~~~~~~~~ 307 (315)
.+.|+..++++.+. ++.|+|++-.. . ....+..+. ..-.|..+-........++|.+.+-+++.
T Consensus 198 ~a~g~~~al~~~g~~~di~vig~d~~~--~----~~~~~~~~~-----l~ttv~~~~~~~g~~av~~l~~~i~g~~~ 263 (305)
T 3g1w_A 198 GGVGVGDAVRLESRAGEIQIISFDTDK--G----TLDLVDEGI-----ISATLAQGTWNMGYWSLTYLFHLHHGLTE 263 (305)
T ss_dssp HHHHHHHHHHHTTCTTTSEEEEESCCH--H----HHHHHHTTS-----SCEEEEECHHHHHHHHHHHHHHHHTTCSC
T ss_pred chhhHHHHHHhcCCCCCeEEEEeCCCH--H----HHHHHHcCc-----eEEEEecChHHHHHHHHHHHHHHhcCCcC
Confidence 78899999998875 68899987531 1 112222211 01233333345555566777776655444
No 371
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=31.68 E-value=2.5e+02 Score=24.08 Aligned_cols=39 Identities=10% Similarity=0.055 Sum_probs=20.7
Q ss_pred HHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 87 MADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 87 l~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
.....++|.+.+++ + ........++...+..|-++..+.
T Consensus 21 a~~la~~G~~V~~~-~-r~~~~~~~~~~~l~~~~~~~~~~~ 59 (264)
T 3tfo_A 21 ARELGVAGAKILLG-A-RRQARIEAIATEIRDAGGTALAQV 59 (264)
T ss_dssp HHHHHHTTCEEEEE-E-SSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHCCCEEEEE-E-CCHHHHHHHHHHHHhcCCcEEEEE
Confidence 33344678764443 3 223344555555566677766554
No 372
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5
Probab=31.54 E-value=99 Score=28.99 Aligned_cols=59 Identities=12% Similarity=-0.065 Sum_probs=39.1
Q ss_pred CEEEecCCch------hHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccch---HHHHHhCCCEEEEEcCC
Q 021235 96 DCIITIGGIQ------SNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGN---LLVERLVGAHIELISKE 160 (315)
Q Consensus 96 ~~vVt~g~s~------GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n---~~~~r~~GAeV~~v~~~ 160 (315)
++|+|.+-|+ .....++-..|.+.|.++.+|+.++.|. ..|. ...+...|-.+.++.+.
T Consensus 179 ~~ILThcnsg~Lat~g~gTal~~l~~A~~~gk~~~V~v~EtRP~------~qGarltA~eL~~~GIpvtlI~Ds 246 (383)
T 2a0u_A 179 VSILTICNTGALATSRYGTALGVVRQLFYDGKLERVYACETRPW------NQGARLTVYECVQEDIPCTLICDG 246 (383)
T ss_dssp EEEEECSCCSTTTSSSSCSHHHHHHHHHHTTCEEEEEEECCTTT------THHHHTHHHHHHHTTCCEEEECGG
T ss_pred CEEEEecCCcchhcCCCchHHHHHHHHHHcCCeEEEEEeCCCCc------cchHHHHHHHHHHcCCCEEEEehh
Confidence 5677765321 1245666677888999999999888753 2342 34556678888887753
No 373
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5
Probab=31.40 E-value=1.1e+02 Score=28.19 Aligned_cols=45 Identities=16% Similarity=0.068 Sum_probs=27.5
Q ss_pred HHHHHHHHHHcCCeEEEEecCCCcccCCCCCccch---HHHHHhCCCEEEEEcC
Q 021235 109 CRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGN---LLVERLVGAHIELISK 159 (315)
Q Consensus 109 g~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n---~~~~r~~GAeV~~v~~ 159 (315)
..++-..|.+.|.++.+++.++.|. ..|. ...+...|-.+.++.+
T Consensus 167 al~~l~~A~~~gk~~~V~v~EtRP~------~qG~rlta~eL~~~GI~vtlI~D 214 (351)
T 1t5o_A 167 ALGVVRSAVEQGKEIRVIACETRPL------NQGSRLTCWELMEDGIDVTLITD 214 (351)
T ss_dssp HHHHHHHHHHTTCCCEEEEECCTTT------THHHHTHHHHHHHTTCCEEEECG
T ss_pred HHHHHHHHHHCCCEEEEEEeCCCcc------cccHHHHHHHHHhCCCCEEEEeh
Confidence 4455566677777777777776643 2332 3445556777777664
No 374
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=31.30 E-value=1.9e+02 Score=22.72 Aligned_cols=45 Identities=20% Similarity=0.138 Sum_probs=21.5
Q ss_pred HHHhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCc
Q 021235 178 LLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGS 230 (315)
Q Consensus 178 l~~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGt 230 (315)
+++.|...+.+|...+++. ......+..++.++. +. |.+|-+.|+
T Consensus 63 ~~~~G~~~~~i~~Dv~~~~-~~~v~~~~~~i~~~~------G~-dVLVnnAgg 107 (157)
T 3gxh_A 63 VTQAGMDYVYIPVDWQNPK-VEDVEAFFAAMDQHK------GK-DVLVHCLAN 107 (157)
T ss_dssp HHHTTCEEEECCCCTTSCC-HHHHHHHHHHHHHTT------TS-CEEEECSBS
T ss_pred HHHcCCeEEEecCCCCCCC-HHHHHHHHHHHHhcC------CC-CEEEECCCC
Confidence 3444544556666544441 112223344443332 34 777777764
No 375
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=31.29 E-value=85 Score=26.77 Aligned_cols=38 Identities=18% Similarity=0.188 Sum_probs=21.4
Q ss_pred HHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 88 ADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 88 ~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
....++|.+.+++ + ........++...+..|-+++.+.
T Consensus 30 ~~l~~~G~~V~~~-~-r~~~~~~~~~~~~~~~~~~~~~~~ 67 (256)
T 3gaf_A 30 GTFAKAGASVVVT-D-LKSEGAEAVAAAIRQAGGKAIGLE 67 (256)
T ss_dssp HHHHHHTCEEEEE-E-SSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHCCCEEEEE-e-CCHHHHHHHHHHHHhcCCcEEEEE
Confidence 3344568764443 2 223445566666667777776653
No 376
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=31.17 E-value=1.1e+02 Score=26.98 Aligned_cols=87 Identities=10% Similarity=0.049 Sum_probs=49.6
Q ss_pred HHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCC--ccchHHHHHhCCCEEEEEcCCcc
Q 021235 85 FLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPG--LIGNLLVERLVGAHIELISKEEY 162 (315)
Q Consensus 85 ~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~--~~~n~~~~r~~GAeV~~v~~~~~ 162 (315)
.+...+.+.|.+.||+ + . .-++..=+..|-.+.+|.|.-.+.-...-+ ..-+...+...||+++.+++.-|
T Consensus 148 ~~A~~a~~~G~dGvV~-s-~-----~e~~~ir~~~~~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~ 220 (259)
T 3tfx_A 148 SLAKMAKHSGADGVIC-S-P-----LEVKKLHENIGDDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPIT 220 (259)
T ss_dssp HHHHHHHHTTCCEEEC-C-G-----GGHHHHHHHHCSSSEEEECCCCCC-----------CHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHHhCCCEEEE-C-H-----HHHHHHHhhcCCccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEEChHHh
Confidence 4445567789999994 2 1 334555556788888899876542110000 01136667789999999997545
Q ss_pred cccChHHHHHHHHHHH
Q 021235 163 SKIGSVTLTNILKEKL 178 (315)
Q Consensus 163 ~~~~~~~~~~~~~~~l 178 (315)
...+..+.++++.+++
T Consensus 221 ~a~dp~~a~~~i~~~~ 236 (259)
T 3tfx_A 221 LASDPKAAYEAIKKEF 236 (259)
T ss_dssp TSSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 4333333444444443
No 377
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=31.05 E-value=1.1e+02 Score=27.82 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=28.0
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 131 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~ 131 (315)
+|..+|- .+|.+++++.+++++|++++++.|+.-
T Consensus 157 ~va~vGD-~~rva~Sl~~~~~~~g~~v~~~~P~~~ 190 (315)
T 1pvv_A 157 KVVYVGD-GNNVAHSLMIAGTKLGADVVVATPEGY 190 (315)
T ss_dssp EEEEESC-CCHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred EEEEECC-CcchHHHHHHHHHHCCCEEEEECCccc
Confidence 4544553 389999999999999999999999764
No 378
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=31.03 E-value=2.2e+02 Score=23.52 Aligned_cols=11 Identities=9% Similarity=0.024 Sum_probs=8.1
Q ss_pred CCeEEEEeccC
Q 021235 247 KAKVHAFSVCD 257 (315)
Q Consensus 247 ~~rVigV~~~g 257 (315)
.++|..|.+..
T Consensus 186 gi~v~~v~Pg~ 196 (258)
T 3afn_B 186 GVRFNIVSPGT 196 (258)
T ss_dssp TEEEEEEEECS
T ss_pred CeEEEEEeCCC
Confidence 67888887753
No 379
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=31.00 E-value=1.7e+02 Score=26.46 Aligned_cols=85 Identities=9% Similarity=0.087 Sum_probs=49.1
Q ss_pred HHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCC--CCCccchHHHHHhCCCEEEEEcCCcccc
Q 021235 87 MADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQ--DPGLIGNLLVERLVGAHIELISKEEYSK 164 (315)
Q Consensus 87 l~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~--~p~~~~n~~~~r~~GAeV~~v~~~~~~~ 164 (315)
...+.+.|.+.||+ ++ + -++..-+..|-.+.+|.|.-.+.-.. +-....+...+...||+++.+++.-|..
T Consensus 164 A~~a~~~G~dGvV~-s~-~-----E~~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~~a 236 (303)
T 3ru6_A 164 SKISYENGLDGMVC-SV-F-----ESKKIKEHTSSNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIVVGRPIYKN 236 (303)
T ss_dssp HHHHHHTTCSEEEC-CT-T-----THHHHHHHSCTTSEEEECCCCTTC--------CCSHHHHHHTTCSEEEECHHHHTS
T ss_pred HHHHHHcCCCEEEE-CH-H-----HHHHHHHhCCCccEEECCCcCcccCCcccccccCCHHHHHHcCCCEEEEChHHhCC
Confidence 34566789999885 22 2 24555566788888899876542100 0000125667778999999999754443
Q ss_pred cChHHHHHHHHHHH
Q 021235 165 IGSVTLTNILKEKL 178 (315)
Q Consensus 165 ~~~~~~~~~~~~~l 178 (315)
.+..+.++++.+++
T Consensus 237 ~dp~~a~~~i~~~i 250 (303)
T 3ru6_A 237 ENPRAVCEKILNKI 250 (303)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 33333334444443
No 380
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=30.95 E-value=46 Score=29.94 Aligned_cols=28 Identities=11% Similarity=0.043 Sum_probs=23.2
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEE
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLI 126 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~iv 126 (315)
+|+..|+ |=.|.++|..-++.|++++||
T Consensus 3 ~V~IVGa--GpaGl~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 3 HVGIIGA--GIGGTCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECc--CHHHHHHHHHHHhCCCCEEEE
Confidence 3555566 678999999999999999888
No 381
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=30.94 E-value=1.2e+02 Score=29.52 Aligned_cols=46 Identities=15% Similarity=0.054 Sum_probs=32.3
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHI 154 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV 154 (315)
++|+..|. |+-|.++|..++.+|.+++++-+ .. .+....+.+|+++
T Consensus 275 ktV~IiG~--G~IG~~~A~~lka~Ga~Viv~d~-~~----------~~~~~A~~~Ga~~ 320 (494)
T 3ce6_A 275 KKVLICGY--GDVGKGCAEAMKGQGARVSVTEI-DP----------INALQAMMEGFDV 320 (494)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEECS-CH----------HHHHHHHHTTCEE
T ss_pred CEEEEEcc--CHHHHHHHHHHHHCCCEEEEEeC-CH----------HHHHHHHHcCCEE
Confidence 56666665 89999999999999997554422 21 2455667788863
No 382
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=30.92 E-value=42 Score=29.92 Aligned_cols=28 Identities=29% Similarity=0.419 Sum_probs=22.4
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLI 126 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~iv 126 (315)
|.+| .|| |=.|.++|+..++.|++++|+
T Consensus 6 DViI-VGa--GpaGl~~A~~La~~G~~V~v~ 33 (397)
T 3oz2_A 6 DVLV-VGG--GPGGSTAARYAAKYGLKTLMI 33 (397)
T ss_dssp EEEE-ECC--SHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEE-ECc--CHHHHHHHHHHHHCCCcEEEE
Confidence 4445 455 667999999999999999887
No 383
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=30.90 E-value=1.2e+02 Score=25.36 Aligned_cols=39 Identities=10% Similarity=0.015 Sum_probs=21.0
Q ss_pred HHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 87 MADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 87 l~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
.....++|.+.++ .+- .......++......+-+++.+.
T Consensus 26 a~~l~~~G~~V~~-~~r-~~~~~~~~~~~~~~~~~~~~~~~ 64 (253)
T 3qiv_A 26 AEALAREGAAVVV-ADI-NAEAAEAVAKQIVADGGTAISVA 64 (253)
T ss_dssp HHHHHHTTCEEEE-EES-CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHCCCEEEE-EcC-CHHHHHHHHHHHHhcCCcEEEEE
Confidence 4444567876444 332 23445555555566677766553
No 384
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=30.89 E-value=1.4e+02 Score=25.20 Aligned_cols=36 Identities=14% Similarity=0.082 Sum_probs=27.7
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEecc
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVC 256 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~~ 256 (315)
.++|+||| .+..++.|+..++++.+. ++.|+|++-.
T Consensus 177 ~~~~ai~~--~~d~~A~g~~~al~~~g~~vP~di~vig~d~~ 216 (277)
T 3hs3_A 177 NQFDAIIT--VNDLYAAEIIKEAKRRNLKIPDDFQLVGYDNN 216 (277)
T ss_dssp GGCSEEEC--SSHHHHHHHHHHHHHTTCCTTTTCEEECSBCC
T ss_pred CCCCEEEE--CCHHHHHHHHHHHHHcCCCCCCceEEEeeCCc
Confidence 36899986 456788899999998763 6778887654
No 385
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=30.89 E-value=2.3e+02 Score=23.52 Aligned_cols=156 Identities=10% Similarity=0.071 Sum_probs=74.2
Q ss_pred HHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCc-c---cCCCCCccch--HHHHHhCCC-EEEEE
Q 021235 85 FLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKV-L---VDQDPGLIGN--LLVERLVGA-HIELI 157 (315)
Q Consensus 85 ~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~-~---~~~~p~~~~n--~~~~r~~GA-eV~~v 157 (315)
.++.....++++.||..+..... .....++..|++++++-..... . ...+....+. ...+...|. +|.++
T Consensus 50 ~~~~~l~~~~vdgii~~~~~~~~---~~~~~l~~~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~G~~~i~~i 126 (275)
T 3d8u_A 50 KLLSTFLESRPAGVVLFGSEHSQ---RTHQLLEASNTPVLEIAELSSKASYLNIGVDHFEVGKACTRHLIEQGFKNVGFI 126 (275)
T ss_dssp HHHHHHHTSCCCCEEEESSCCCH---HHHHHHHHHTCCEEEESSSCSSSSSEEECBCHHHHHHHHHHHHHTTTCCCEEEE
T ss_pred HHHHHHHhcCCCEEEEeCCCCCH---HHHHHHHhCCCCEEEEeeccCCCCCCEEEEChHHHHHHHHHHHHHCCCCeEEEE
Confidence 34555667888988866432222 2233445679998877432111 0 0000000111 122333464 45555
Q ss_pred cCCcccccChHHHHHHHHHHHHHhCCC--cEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHH
Q 021235 158 SKEEYSKIGSVTLTNILKEKLLKEGRR--PYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIA 235 (315)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~l~~~~~~--~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~a 235 (315)
.... ......++.+-..+.+++.+.. ..++..+..+. ..|+ ....++.++ ..++|+||+. +..++.
T Consensus 127 ~~~~-~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~--~~~~-~~~~~~l~~------~~~~~ai~~~--~d~~a~ 194 (275)
T 3d8u_A 127 GARG-NHSTLQRQLHGWQSAMIENYLTPDHFLTTHEAPSS--QLGA-EGLAKLLLR------DSSLNALVCS--HEEIAI 194 (275)
T ss_dssp ECSC-SSHHHHHHHHHHHHHHHHTTCCCCCEEECSSCCCH--HHHH-HHHHHHHTT------CTTCCEEEES--SHHHHH
T ss_pred cCCC-CCchHHHHHHHHHHHHHHcCCCCCccEEEeCCCCh--hHHH-HHHHHHHhC------CCCCCEEEEc--CcHHHH
Confidence 4321 1001122333344455554421 22222222222 2233 223333322 2468999974 567889
Q ss_pred HHHHHHhcCCC----CCeEEEEec
Q 021235 236 GLSLGSWLGTL----KAKVHAFSV 255 (315)
Q Consensus 236 Gl~~~~k~~~~----~~rVigV~~ 255 (315)
|+..++++.+. ++.|+|++-
T Consensus 195 g~~~al~~~g~~vP~di~vvg~d~ 218 (275)
T 3d8u_A 195 GALFECHRRVLKVPTDIAIICLEG 218 (275)
T ss_dssp HHHHHHHHTTCCTTTTCEEEESSC
T ss_pred HHHHHHHHcCCCCCCceEEEecCC
Confidence 99999998763 567888764
No 386
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=30.88 E-value=2.3e+02 Score=24.61 Aligned_cols=33 Identities=21% Similarity=0.188 Sum_probs=22.8
Q ss_pred CCCEEEecCCchhH--HHHHHHHHHHHcCCeEEEEec
Q 021235 94 GADCIITIGGIQSN--HCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 94 G~~~vVt~g~s~GN--hg~alA~aa~~lGl~~~ivvp 128 (315)
|...||| |++ |. -|.++|....+.|.+++++.+
T Consensus 31 gk~~lVT-Gas-g~~GIG~aia~~la~~G~~V~~~~r 65 (293)
T 3grk_A 31 GKRGLIL-GVA-NNRSIAWGIAKAAREAGAELAFTYQ 65 (293)
T ss_dssp TCEEEEE-CCC-SSSSHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEE-cCC-CCCcHHHHHHHHHHHCCCEEEEEcC
Confidence 3334554 544 45 899999999999998766643
No 387
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5
Probab=30.87 E-value=1.1e+02 Score=28.26 Aligned_cols=59 Identities=14% Similarity=0.050 Sum_probs=38.0
Q ss_pred CEEEecCCchh------HHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccch---HHHHHhCCCEEEEEcCC
Q 021235 96 DCIITIGGIQS------NHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGN---LLVERLVGAHIELISKE 160 (315)
Q Consensus 96 ~~vVt~g~s~G------Nhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n---~~~~r~~GAeV~~v~~~ 160 (315)
++|+|++.|++ ....++-..|.+.|.++++++.++.|. ..|. ...+...|-.+.++.+.
T Consensus 150 ~~ILThcns~~lat~~~gtvl~~l~~A~~~gk~~~V~v~EtRP~------~qG~rlta~eL~~~GI~vtlI~Ds 217 (347)
T 1t9k_A 150 STILTHCNAGALATVDYGTALGVIRAAVESGKRIRVFADETRPY------LQGARLTAWELMKDGIEVYVITDN 217 (347)
T ss_dssp EEEEECSCCSGGGSSSSCSHHHHHHHHHHTTCCEEEEEECCTTT------THHHHTHHHHHHTTTCEEEEECGG
T ss_pred CEEEEecCCCccccCCccHHHHHHHHHHHCCCeEEEEEeCCCCc------cccHHHHHHHHHhCCCCEEEEehh
Confidence 46777753320 033455566778899999999887753 2342 34566678888888753
No 388
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=30.79 E-value=60 Score=28.02 Aligned_cols=37 Identities=14% Similarity=0.190 Sum_probs=25.5
Q ss_pred HHHHHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 83 LEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 83 l~~ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
++..+.++.++|++.|| |+ .-+.-.|+++|++++++.
T Consensus 143 ~~~~i~~l~~~G~~vVV--G~------~~~~~~A~~~Gl~~vlI~ 179 (225)
T 2pju_A 143 ARGQINELKANGTEAVV--GA------GLITDLAEEAGMTGIFIY 179 (225)
T ss_dssp HHHHHHHHHHTTCCEEE--ES------HHHHHHHHHTTSEEEESS
T ss_pred HHHHHHHHHHCCCCEEE--CC------HHHHHHHHHcCCcEEEEC
Confidence 45557777788888777 33 234667788888887775
No 389
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=30.76 E-value=87 Score=29.62 Aligned_cols=48 Identities=15% Similarity=0.025 Sum_probs=34.5
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
.+|+..|+ |.-|.++|..++.+|.+++++ +... .++..++.+|++.+.
T Consensus 191 ~kV~ViG~--G~iG~~aa~~a~~lGa~V~v~-D~~~----------~~l~~~~~~G~~~~~ 238 (405)
T 4dio_A 191 AKIFVMGA--GVAGLQAIATARRLGAVVSAT-DVRP----------AAKEQVASLGAKFIA 238 (405)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEE-CSST----------THHHHHHHTTCEECC
T ss_pred CEEEEECC--cHHHHHHHHHHHHCCCEEEEE-cCCH----------HHHHHHHHcCCceee
Confidence 35666676 899999999999999975544 3221 246677789998644
No 390
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=30.76 E-value=1.3e+02 Score=27.16 Aligned_cols=53 Identities=8% Similarity=0.065 Sum_probs=27.1
Q ss_pred EEecCCchhHHHHH--HHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEE
Q 021235 98 IITIGGIQSNHCRA--AAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHI 154 (315)
Q Consensus 98 vVt~g~s~GNhg~a--lA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV 154 (315)
+|.|| ++-|-|-+ +|..-+..|++++++++...... .....++...+..|..+
T Consensus 136 lVlcG-~GNNGGDGlv~AR~L~~~G~~V~V~~~~~~~~~---~~a~~~~~~~~~~g~~~ 190 (306)
T 3d3j_A 136 ALLCG-PHVKGAQGISCGRHLANHDVQVILFLPNFVKML---ESITNELSLFSKTQGQQ 190 (306)
T ss_dssp EEEEC-SSHHHHHHHHHHHHHHHTTCEEEEECCCCSSCC---HHHHHHHHHHHTSSCEE
T ss_pred EEEEC-CCCCHHHHHHHHHHHHHCCCcEEEEEecCCCCC---HHHHHHHHHHHHcCCcc
Confidence 45554 44444444 44444557999998876532110 11123455555666554
No 391
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=30.68 E-value=86 Score=26.69 Aligned_cols=10 Identities=20% Similarity=0.205 Sum_probs=8.0
Q ss_pred CCeEEEEecc
Q 021235 247 KAKVHAFSVC 256 (315)
Q Consensus 247 ~~rVigV~~~ 256 (315)
.++|..|.+.
T Consensus 179 gIrvn~v~PG 188 (257)
T 3imf_A 179 GIRVNAIAPG 188 (257)
T ss_dssp CCEEEEEEEC
T ss_pred CeEEEEEEEC
Confidence 6888888875
No 392
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=30.62 E-value=44 Score=29.22 Aligned_cols=28 Identities=21% Similarity=0.296 Sum_probs=22.0
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLI 126 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~iv 126 (315)
|.+| .|| |=.|.+.|..++++|+++++|
T Consensus 8 DVvI-IGa--GpAGlsAA~~lar~g~~v~li 35 (304)
T 4fk1_A 8 DCAV-IGA--GPAGLNASLVLGRARKQIALF 35 (304)
T ss_dssp EEEE-ECC--SHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEE-ECC--CHHHHHHHHHHHHCCCCEEEE
Confidence 4455 455 667888899999999998887
No 393
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=30.55 E-value=1.4e+02 Score=24.96 Aligned_cols=32 Identities=19% Similarity=0.052 Sum_probs=24.1
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
+++..|+ +|.-|.++|..-.+.|.+++++.+.
T Consensus 14 ~vlVTGa-sggiG~~~a~~l~~~G~~V~~~~r~ 45 (265)
T 2o23_A 14 VAVITGG-ASGLGLATAERLVGQGASAVLLDLP 45 (265)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEECT
T ss_pred EEEEECC-CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3443454 4789999999999999998877654
No 394
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=30.25 E-value=56 Score=29.95 Aligned_cols=31 Identities=32% Similarity=0.305 Sum_probs=24.9
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
+|...|+ |..|+.+|.+|+++|++++++-+.
T Consensus 16 ~IlIlG~--G~~g~~la~aa~~~G~~vi~~d~~ 46 (389)
T 3q2o_A 16 TIGIIGG--GQLGRMMALAAKEMGYKIAVLDPT 46 (389)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECC--CHHHHHHHHHHHHcCCEEEEEeCC
Confidence 4555565 678999999999999999888654
No 395
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=30.12 E-value=2.9e+02 Score=24.38 Aligned_cols=142 Identities=12% Similarity=0.087 Sum_probs=74.1
Q ss_pred HHHHHH-cCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCC--C-------CCc----cchHHHHHhCCC
Q 021235 87 MADAVA-QGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQ--D-------PGL----IGNLLVERLVGA 152 (315)
Q Consensus 87 l~~a~~-~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~--~-------p~~----~~n~~~~r~~GA 152 (315)
+.+..+ .+++.|| |..++....+++-.+.+.+++.+............ . +.. ..-...+..+|.
T Consensus 65 ~~~li~~~~v~~ii--G~~~s~~~~a~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~ 142 (379)
T 3n0w_A 65 AREWFDRDGVDAIF--DVVNSGTALAINNLVKDKKKLAFITAAAADQIGGTECNGYGIGFLYNFTSIVKTVVQAQLAKGY 142 (379)
T ss_dssp HHHHHHHSCCCEEE--ECCCHHHHHHHHHHHHHHTCEEEECSCCCTTTTTTTCCSSEEECSCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCceEEE--cCCCcHHHHHHHHHHHHcCceEEEcCCCchhhhcccCCCcEEEEeCChHHHHHHHHHHHHHcCC
Confidence 333344 7888777 44456778888999999999987663322111100 0 100 011233445565
Q ss_pred E-EEEEcC-CcccccChHHHHHHHHHHHHHhCCCc---EEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEe
Q 021235 153 H-IELISK-EEYSKIGSVTLTNILKEKLLKEGRRP---YVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVA 227 (315)
Q Consensus 153 e-V~~v~~-~~~~~~~~~~~~~~~~~~l~~~~~~~---y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~ 227 (315)
+ |.++.. ..|.. ...+...+.+++.+... ..+|.+..+. .....+|.+ .++|.||++
T Consensus 143 ~~vaii~~~~~~g~----~~~~~~~~~~~~~G~~v~~~~~~~~~~~d~------~~~l~~i~~--------~~~d~v~~~ 204 (379)
T 3n0w_A 143 KTWFLMLPDAAYGD----LMNAAIRRELTAGGGQIVGSVRFPFETQDF------SSYLLQAKA--------SGAQLIVST 204 (379)
T ss_dssp CEEEEEEESSHHHH----HHHHHHHHHHHHHTCEEEEEEEECTTCCCC------HHHHHHHHH--------HTCSEEEEC
T ss_pred cEEEEEecccchhH----HHHHHHHHHHHHcCCEEEEEEeCCCCCCCH------HHHHHHHHH--------CCCCEEEEe
Confidence 4 544432 22211 23344444555555322 1234332222 122333322 248888875
Q ss_pred CCchhhHHHHHHHHhcCCCCCe
Q 021235 228 CGSGGTIAGLSLGSWLGTLKAK 249 (315)
Q Consensus 228 vGtGGt~aGl~~~~k~~~~~~r 249 (315)
+.+..+.++.+.+++.+.+.+
T Consensus 205 -~~~~~~~~~~~~~~~~g~~~~ 225 (379)
T 3n0w_A 205 -SGGAANINIMKQAREFGLPSK 225 (379)
T ss_dssp -CCHHHHHHHHHHHHHTTCSCS
T ss_pred -cccchHHHHHHHHHHcCCCCC
Confidence 556778889999988876655
No 396
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=29.93 E-value=1.1e+02 Score=26.35 Aligned_cols=39 Identities=13% Similarity=-0.020 Sum_probs=20.3
Q ss_pred HHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 87 MADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 87 l~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
.....++|.+.+++ +- .......++...+..|.++..+.
T Consensus 41 a~~la~~G~~V~~~-~r-~~~~~~~~~~~l~~~~~~~~~~~ 79 (279)
T 3sju_A 41 ARTLAARGIAVYGC-AR-DAKNVSAAVDGLRAAGHDVDGSS 79 (279)
T ss_dssp HHHHHHTTCEEEEE-ES-CHHHHHHHHHHHHTTTCCEEEEE
T ss_pred HHHHHHCCCEEEEE-eC-CHHHHHHHHHHHHhcCCcEEEEE
Confidence 33444678764443 32 23334455555556677766654
No 397
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=29.82 E-value=1.1e+02 Score=28.07 Aligned_cols=56 Identities=20% Similarity=0.228 Sum_probs=37.2
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHH----HHHhCCCEEEEEc
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLL----VERLVGAHIELIS 158 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~----~~r~~GAeV~~v~ 158 (315)
+|..+|-..+|.+++++.+++++|++++++.|+.-. |. ..-+. ..+..|+++....
T Consensus 157 ~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~-----p~-~~~~~~~~~~a~~~G~~v~~~~ 216 (333)
T 1duv_G 157 TLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACW-----PE-AALVTECRALAQQNGGNITLTE 216 (333)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGC-----CC-HHHHHHHHHHHHHTTCEEEEES
T ss_pred EEEEECCCccchHHHHHHHHHHcCCEEEEECCcccC-----CC-HHHHHHHHHHHHHcCCeEEEEE
Confidence 455455333699999999999999999999987542 11 00112 2236788877654
No 398
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=29.81 E-value=1.7e+02 Score=27.25 Aligned_cols=38 Identities=13% Similarity=0.107 Sum_probs=23.1
Q ss_pred CCCeEEEeCC-chhhHHHHHHH----HhcCCCCCeEEEEeccC
Q 021235 220 KFDDIVVACG-SGGTIAGLSLG----SWLGTLKAKVHAFSVCD 257 (315)
Q Consensus 220 ~~D~ivv~vG-tGGt~aGl~~~----~k~~~~~~rVigV~~~g 257 (315)
..|.+|+..| +|||=+|++-. +++.+++..|..|.+..
T Consensus 88 g~dgffI~aslGGGTGSG~~pvLae~lke~~~~k~v~~vtV~P 130 (360)
T 3v3t_A 88 SCDIVIFVATMAGGAGSGITPPILGLAKQMYPNKHFGFVGVLP 130 (360)
T ss_dssp TCSEEEEEEETTSHHHHHHHHHHHHHHHHHCTTSEEEEEEEEC
T ss_pred CCCeEEEeeccCCCccccHHHHHHHHHHHhCCCCeEEEEEEeC
Confidence 4788877776 66666776544 45567764555554443
No 399
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=29.77 E-value=2.9e+02 Score=24.27 Aligned_cols=70 Identities=13% Similarity=-0.070 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHHHHHcCC-CEEEecCCchhHH----H-HHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCC
Q 021235 78 NKVRKLEFLMADAVAQGA-DCIITIGGIQSNH----C-RAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVG 151 (315)
Q Consensus 78 ~K~R~l~~ll~~a~~~G~-~~vVt~g~s~GNh----g-~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~G 151 (315)
...++...++++.++... ..|+.. +.-|- | -..+..|+..|+..+++.+-.... ...-...++.+|
T Consensus 77 ~~~~~~~~~v~~ir~~~~~~Pivlm--~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee------~~~~~~~~~~~g 148 (267)
T 3vnd_A 77 TTSSDCFDIITKVRAQHPDMPIGLL--LYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEE------SAPFSKAAKAHG 148 (267)
T ss_dssp CCHHHHHHHHHHHHHHCTTCCEEEE--ECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGG------CHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhcCCCCCEEEE--ecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhh------HHHHHHHHHHcC
Confidence 445555566665554422 123322 12343 1 235666667777777774332210 122356677777
Q ss_pred CEEE
Q 021235 152 AHIE 155 (315)
Q Consensus 152 AeV~ 155 (315)
-+++
T Consensus 149 l~~i 152 (267)
T 3vnd_A 149 IAPI 152 (267)
T ss_dssp CEEE
T ss_pred CeEE
Confidence 7654
No 400
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=29.73 E-value=1.1e+02 Score=27.12 Aligned_cols=57 Identities=23% Similarity=0.100 Sum_probs=39.4
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccch--HHHHHhCCCEEEEEcCC
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGN--LLVERLVGAHIELISKE 160 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n--~~~~r~~GAeV~~v~~~ 160 (315)
++|+|.+.| ....++...++..|.++++|+.++.|. ..|. ...+...|-++.++.+.
T Consensus 111 ~~IlT~~~s--~Tv~~~l~~a~~~~~~~~V~v~etrP~------~qG~~~a~~L~~~gI~vtli~ds 169 (276)
T 1vb5_A 111 DVIITHSFS--STVLEIIRTAKERKKRFKVILTESSPD------YEGLHLARELEFSGIEFEVITDA 169 (276)
T ss_dssp EEEECCSCC--HHHHHHHHHHHHTTCCEEEEEECCTTT------THHHHHHHHHHHTTCCEEEECGG
T ss_pred CEEEEeCCC--hHHHHHHHHHHHcCCeEEEEEeCCCcc------hhhHHHHHHHHHCCCCEEEEcHH
Confidence 567877653 467778888888899999999887653 2332 22333479999988853
No 401
>3kl2_A Putative isochorismatase; structural genomics, unknown function, PSI-2, protein struct initiative; 2.30A {Streptomyces avermitilis} SCOP: c.33.1.0
Probab=29.58 E-value=75 Score=27.11 Aligned_cols=52 Identities=15% Similarity=0.231 Sum_probs=36.0
Q ss_pred chhHHHHHHHHHHHHHHcCCCEEEecCCchhHHH-HHHHHHHHHcCCeEEEEecCCC
Q 021235 76 SGNKVRKLEFLMADAVAQGADCIITIGGIQSNHC-RAAAVAAKYLNLDCYLILRTSK 131 (315)
Q Consensus 76 gg~K~R~l~~ll~~a~~~G~~~vVt~g~s~GNhg-~alA~aa~~lGl~~~ivvp~~~ 131 (315)
++|..-.+..+| ++.|+++||.+|- ..|.| .++|.-|..+|++++++-+...
T Consensus 135 SaF~~t~L~~~L---~~~gi~~lii~G~-~T~~CV~~Ta~da~~~Gy~v~vv~Da~~ 187 (226)
T 3kl2_A 135 DTFASTNLDFIL---RSKGVDTIVLGGF-LTNCCVESTMRTGYERGFRVITLTDCVA 187 (226)
T ss_dssp SHHHHSSHHHHH---HHHTCCEEEEEEE-CTTTHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CCccCchHHHHH---hCCCCCcEEEecc-CcchHHHHHHHHHHHCCCEEEEechhhc
Confidence 555433444434 3568999998764 45555 4788889999999999877544
No 402
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=29.57 E-value=2.5e+02 Score=23.61 Aligned_cols=32 Identities=13% Similarity=-0.016 Sum_probs=26.1
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCCC--CCeEEEE
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGTL--KAKVHAF 253 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~~--~~rVigV 253 (315)
.++|+ |++ +...+.|+..++++.+. ++.|+|+
T Consensus 193 ~~~~a-i~~--~d~~a~g~~~al~~~g~~~di~vvg~ 226 (304)
T 3o1i_D 193 GNIDY-IVG--SAVAIEAAISELRSADKTHDIGLVSV 226 (304)
T ss_dssp SCCSE-EEE--CHHHHHHHHHHHTTTTCGGGSEEBCS
T ss_pred CCCCE-EEe--cCcchHHHHHHHHhcCCCCCeEEEEe
Confidence 36899 654 67889999999999886 7888887
No 403
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=29.45 E-value=1.9e+02 Score=27.19 Aligned_cols=55 Identities=4% Similarity=-0.103 Sum_probs=34.8
Q ss_pred EEEecCCchhHHHHHHHHHHHHc------C---------CeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYL------N---------LDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 159 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~l------G---------l~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~ 159 (315)
.+++.|||.+|+..-+|+.-+.+ | =+.+++++.... ......++..|++++.++-
T Consensus 148 g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H--------~s~~~~~~~~g~~~~~v~~ 217 (481)
T 4e1o_A 148 GVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAH--------SSVEKAGLISLVKMKFLPV 217 (481)
T ss_dssp EEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSC--------HHHHHHHHHHTCEEEEECC
T ss_pred eEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcch--------HHHHHHHHhCCCceEEEEc
Confidence 47888888888765554433211 1 256788776542 2234556678999999974
No 404
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=29.42 E-value=2.6e+02 Score=23.65 Aligned_cols=30 Identities=20% Similarity=0.121 Sum_probs=21.8
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
.||| |++ +--|.++|..-.+.|.+++++-+
T Consensus 11 ~lVT-Gas-~GIG~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 11 AVVT-GGS-SGIGLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp EEEE-TCS-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEe-CCC-ChHHHHHHHHHHHCCCEEEEEeC
Confidence 3454 544 67899999998999998766644
No 405
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=29.41 E-value=47 Score=31.22 Aligned_cols=28 Identities=18% Similarity=0.131 Sum_probs=23.5
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEE
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLI 126 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~iv 126 (315)
+||..|| |-.|.+.|+.-++.|++++|+
T Consensus 3 ~VvVIGa--G~~GL~aA~~La~~G~~V~Vl 30 (501)
T 4dgk_A 3 PTTVIGA--GFGGLALAIRLQAAGIPVLLL 30 (501)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEECC--cHHHHHHHHHHHHCCCcEEEE
Confidence 4555676 889999999999999998877
No 406
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=29.37 E-value=58 Score=29.47 Aligned_cols=53 Identities=8% Similarity=-0.004 Sum_probs=36.3
Q ss_pred EEEecCC-chhHHHHHHHHHHHHc-CCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 97 CIITIGG-IQSNHCRAAAVAAKYL-NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 97 ~vVt~g~-s~GNhg~alA~aa~~l-Gl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
+|...|- ..+|.+++++.+++++ |++++++.|+.-. | ...+ ++..|+++....
T Consensus 151 ~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~-----~--~~~~--~~~~g~~~~~~~ 205 (299)
T 1pg5_A 151 VFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLR-----A--RKEI--LDELNYPVKEVE 205 (299)
T ss_dssp EEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGC-----C--CHHH--HTTCCSCEEEES
T ss_pred EEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhc-----C--CHHH--HHHcCCeEEEeC
Confidence 4444442 2479999999999999 9999999987541 1 1122 456777765554
No 407
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=29.33 E-value=82 Score=28.76 Aligned_cols=48 Identities=15% Similarity=0.194 Sum_probs=29.6
Q ss_pred HHHHHHHHHhcCCCCCCCC--eEEEeCCchhh--HHHHHHHHhcCCCCCeEEEEeccC
Q 021235 204 AIKEIEQQLQTGTGGVKFD--DIVVACGSGGT--IAGLSLGSWLGTLKAKVHAFSVCD 257 (315)
Q Consensus 204 ~a~EI~~Q~~~~~~~~~~D--~ivv~vGtGGt--~aGl~~~~k~~~~~~rVigV~~~g 257 (315)
...++++++.+ ..+| .+|+++|+|.. ++|.+.... .+.++++.|.+.-
T Consensus 75 ~v~~~~~~~~~----~~~~r~d~iIavGGGsv~D~ak~vA~~~--~rgip~i~IPTT~ 126 (354)
T 1xah_A 75 QYQETLEYILS----HHVTRNTAIIAVGGGATGDFAGFVAATL--LRGVHFIQVPTTI 126 (354)
T ss_dssp HHHHHHHHHHT----TCCCTTCEEEEEESHHHHHHHHHHHHHB--TTCCEEEEEECST
T ss_pred HHHHHHHHHHH----cCCCCCceEEEECChHHHHHHHHHHHHh--ccCCCEEEECCcc
Confidence 34566666653 2343 67888888765 455554443 3567888888764
No 408
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=29.29 E-value=1.4e+02 Score=26.44 Aligned_cols=37 Identities=14% Similarity=0.083 Sum_probs=28.8
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEeccC
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVCD 257 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~~g 257 (315)
.+||+|||. +..++.|+..++++.+. ++.|+|++-..
T Consensus 237 ~~~~ai~~~--nD~~A~g~~~al~~~G~~vP~disvvGfD~~~ 277 (349)
T 1jye_A 237 IVPTAMLVA--NDQMALGAMRAITESGLRVGADISVVGYDDTE 277 (349)
T ss_dssp CCCSEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEECSBCCG
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCcEEEEEECCcH
Confidence 468999975 66788999999998763 57788887543
No 409
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=29.12 E-value=51 Score=29.80 Aligned_cols=30 Identities=27% Similarity=0.130 Sum_probs=24.1
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
.|+..|| |=.|.++|...++.|++++|+=.
T Consensus 13 dVvIVGa--G~aGl~~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 13 RAEVAGG--GFAGLTAAIALKQNGWDVRLHEK 42 (379)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCEEEEECS
T ss_pred eEEEECC--CHHHHHHHHHHHHCCCCEEEEec
Confidence 3555566 77899999999999999888743
No 410
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=28.86 E-value=51 Score=29.55 Aligned_cols=29 Identities=24% Similarity=0.118 Sum_probs=23.4
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
|+..|| |=.|.++|+..++.|++++++=.
T Consensus 20 vvIIGg--G~~Gl~~A~~La~~G~~V~llE~ 48 (382)
T 1ryi_A 20 AVVIGG--GIIGSAIAYYLAKENKNTALFES 48 (382)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEECS
T ss_pred EEEECc--CHHHHHHHHHHHhCCCcEEEEeC
Confidence 444566 78899999999999999888744
No 411
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=28.78 E-value=1.2e+02 Score=25.55 Aligned_cols=32 Identities=16% Similarity=-0.014 Sum_probs=23.9
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 130 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~ 130 (315)
.||| |++ |--|.++|..-.+.|.+++++-+..
T Consensus 10 ~lVT-Gas-~gIG~aia~~l~~~G~~V~~~~r~~ 41 (257)
T 3tpc_A 10 FIVT-GAS-SGLGAAVTRMLAQEGATVLGLDLKP 41 (257)
T ss_dssp EEEE-STT-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEe-CCC-CHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3454 544 6789999999999999987775543
No 412
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=28.76 E-value=2.5e+02 Score=23.20 Aligned_cols=12 Identities=8% Similarity=0.105 Sum_probs=8.7
Q ss_pred CCCeEEEEeccC
Q 021235 246 LKAKVHAFSVCD 257 (315)
Q Consensus 246 ~~~rVigV~~~g 257 (315)
..++|..|.+..
T Consensus 180 ~~i~v~~v~Pg~ 191 (255)
T 1fmc_A 180 KNIRVNGIAPGA 191 (255)
T ss_dssp TTEEEEEEEECS
T ss_pred cCcEEEEEeccc
Confidence 468888887754
No 413
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=28.71 E-value=1e+02 Score=26.77 Aligned_cols=55 Identities=7% Similarity=-0.045 Sum_probs=30.0
Q ss_pred EEEecCCchhHHHHH--HHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEE
Q 021235 97 CIITIGGIQSNHCRA--AAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIE 155 (315)
Q Consensus 97 ~vVt~g~s~GNhg~a--lA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~ 155 (315)
-+|.|| ++-|-|-+ +|..-+..|+++++|++.... . .+....++...+.+|..+.
T Consensus 61 v~VlcG-~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~-~--~~~~~~~~~~~~~~g~~~~ 117 (246)
T 1jzt_A 61 VFVIAG-PGNNGGDGLVCARHLKLFGYNPVVFYPKRSE-R--TEFYKQLVHQLNFFKVPVL 117 (246)
T ss_dssp EEEEEC-SSHHHHHHHHHHHHHHHTTCCEEEECCCCCT-T--CHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEC-CCCCHHHHHHHHHHHHHCCCeEEEEEcCCCC-C--CHHHHHHHHHHHHcCCcEE
Confidence 345554 54444444 444445579999999865421 1 1112334666777776653
No 414
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=28.68 E-value=53 Score=24.68 Aligned_cols=29 Identities=7% Similarity=0.000 Sum_probs=22.9
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
+|+.+|+ |..|..+|...+..|.+++++-
T Consensus 8 ~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d 36 (144)
T 2hmt_A 8 QFAVIGL--GRFGGSIVKELHRMGHEVLAVD 36 (144)
T ss_dssp SEEEECC--SHHHHHHHHHHHHTTCCCEEEE
T ss_pred cEEEECC--CHHHHHHHHHHHHCCCEEEEEe
Confidence 3555564 8999999999999999877664
No 415
>2a67_A Isochorismatase family protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 2.00A {Enterococcus faecalis}
Probab=28.65 E-value=65 Score=25.95 Aligned_cols=40 Identities=20% Similarity=0.384 Sum_probs=30.0
Q ss_pred HHcCCCEEEecCCchhHHHH-HHHHHHHHcCCeEEEEecCCC
Q 021235 91 VAQGADCIITIGGIQSNHCR-AAAVAAKYLNLDCYLILRTSK 131 (315)
Q Consensus 91 ~~~G~~~vVt~g~s~GNhg~-alA~aa~~lGl~~~ivvp~~~ 131 (315)
+++|.++||.+| ...|.|. ++|.-|..+|++++++.+...
T Consensus 97 ~~~gi~~lvv~G-~~T~~CV~~Ta~da~~~Gy~v~v~~Da~~ 137 (167)
T 2a67_A 97 TEQAVQTLEIAG-VQTEFCVDTTIRMAHGLGYTCLMTPKTTS 137 (167)
T ss_dssp HHTTCCEEEEEE-ECTTTHHHHHHHHHHHHTCEEEECTTCEE
T ss_pred HHCCCCEEEEEe-cccChHHHHHHHHHHHCCCEEEEechhhc
Confidence 457999998876 4556665 788888899999888765543
No 416
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=28.64 E-value=2.6e+02 Score=23.49 Aligned_cols=32 Identities=19% Similarity=0.113 Sum_probs=23.1
Q ss_pred EEEecCCc-hhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 97 CIITIGGI-QSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 97 ~vVt~g~s-~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
.+|| |++ +|--|+++|..-.+.|.+++++.+.
T Consensus 11 vlVT-Gas~~~gIG~~ia~~l~~~G~~V~~~~r~ 43 (261)
T 2wyu_A 11 ALVM-GVTNQRSLGFAIAAKLKEAGAEVALSYQA 43 (261)
T ss_dssp EEEE-SCCSSSSHHHHHHHHHHHHTCEEEEEESC
T ss_pred EEEE-CCCCCCcHHHHHHHHHHHCCCEEEEEcCC
Confidence 3454 654 2678999999888899987776543
No 417
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=28.61 E-value=2.8e+02 Score=23.73 Aligned_cols=30 Identities=23% Similarity=0.403 Sum_probs=22.4
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
.+|| |+ +|.-|.++|....+.|.+++++.+
T Consensus 29 vlIT-Ga-sggiG~~la~~L~~~G~~V~~~~r 58 (302)
T 1w6u_A 29 AFIT-GG-GTGLGKGMTTLLSSLGAQCVIASR 58 (302)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEE-CC-CchHHHHHHHHHHHCCCEEEEEeC
Confidence 3454 54 478999999999999998776654
No 418
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=28.50 E-value=2.4e+02 Score=24.14 Aligned_cols=30 Identities=13% Similarity=-0.026 Sum_probs=21.7
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
+++..|+ +|.-|.++|....+.|.+++++.
T Consensus 46 ~vlITGa-sggIG~~la~~L~~~G~~V~~~~ 75 (285)
T 2c07_A 46 VALVTGA-GRGIGREIAKMLAKSVSHVICIS 75 (285)
T ss_dssp EEEEEST-TSHHHHHHHHHHTTTSSEEEEEE
T ss_pred EEEEECC-CcHHHHHHHHHHHHcCCEEEEEc
Confidence 3443454 47899999998888898877743
No 419
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=28.48 E-value=1.6e+02 Score=25.70 Aligned_cols=12 Identities=17% Similarity=0.036 Sum_probs=9.4
Q ss_pred CCCeEEEEeccC
Q 021235 246 LKAKVHAFSVCD 257 (315)
Q Consensus 246 ~~~rVigV~~~g 257 (315)
.+++|..|.+..
T Consensus 213 ~gI~vn~v~PG~ 224 (293)
T 3rih_A 213 RGVTVNAILPGN 224 (293)
T ss_dssp GTCEEEEEEECS
T ss_pred hCeEEEEEecCC
Confidence 468999998864
No 420
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=28.47 E-value=2.3e+02 Score=24.23 Aligned_cols=29 Identities=14% Similarity=0.197 Sum_probs=21.6
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
.||| |+ +|.-|+++|....+.|.+++++-
T Consensus 32 vlVT-Ga-s~gIG~aia~~L~~~G~~V~~~~ 60 (276)
T 2b4q_A 32 ALVT-GG-SRGIGQMIAQGLLEAGARVFICA 60 (276)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEe-CC-CChHHHHHHHHHHHCCCEEEEEe
Confidence 3454 54 47889999999999998866654
No 421
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=28.46 E-value=53 Score=29.99 Aligned_cols=29 Identities=34% Similarity=0.352 Sum_probs=23.2
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
|+..|| |=.|.++|+..++.|++++|+=.
T Consensus 26 V~IVGa--G~aGl~~A~~La~~G~~V~v~E~ 54 (407)
T 3rp8_A 26 AIVIGA--GIGGLSAAVALKQSGIDCDVYEA 54 (407)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEECC--CHHHHHHHHHHHhCCCCEEEEeC
Confidence 444566 67899999999999999888743
No 422
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=28.37 E-value=2.2e+02 Score=25.17 Aligned_cols=31 Identities=10% Similarity=-0.013 Sum_probs=22.9
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
.+|| |+ +|--|.++|......|.+++++.+.
T Consensus 11 vlVT-Ga-s~gIG~~la~~l~~~G~~Vv~~~r~ 41 (319)
T 3ioy_A 11 AFVT-GG-ANGVGIGLVRQLLNQGCKVAIADIR 41 (319)
T ss_dssp EEEE-TT-TSTHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEc-CC-chHHHHHHHHHHHHCCCEEEEEECC
Confidence 3454 54 4678999999999999987776554
No 423
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=28.35 E-value=1.5e+02 Score=25.63 Aligned_cols=14 Identities=7% Similarity=-0.261 Sum_probs=11.1
Q ss_pred CCCCCeEEEEeccC
Q 021235 244 GTLKAKVHAFSVCD 257 (315)
Q Consensus 244 ~~~~~rVigV~~~g 257 (315)
..|++||-+|.|..
T Consensus 164 la~~IrVN~I~PG~ 177 (247)
T 3ged_A 164 LGPDVLVNCIAPGW 177 (247)
T ss_dssp HTTTSEEEEEEECS
T ss_pred HCCCCEEEEEecCc
Confidence 46789999998863
No 424
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=28.17 E-value=2.6e+02 Score=24.38 Aligned_cols=34 Identities=15% Similarity=0.090 Sum_probs=27.3
Q ss_pred CCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEecc
Q 021235 221 FDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVC 256 (315)
Q Consensus 221 ~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~~ 256 (315)
||+||| .+...+.|+..++++.+. ++.|+|++-.
T Consensus 232 ~~ai~~--~nd~~A~g~~~al~~~G~~vP~disvig~D~~ 269 (333)
T 3jvd_A 232 PDALIV--ASPRLMAGVMRAFTRLNVRVPHDVVIGGYDDP 269 (333)
T ss_dssp CSEEEE--CCHHHHHHHHHHHHHTTCCTTTTCEEEEESCC
T ss_pred CcEEEE--CCHHHHHHHHHHHHHcCCCCCCceEEEEECCh
Confidence 899997 456788899999998873 6789998754
No 425
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=28.15 E-value=2.6e+02 Score=23.34 Aligned_cols=31 Identities=13% Similarity=0.047 Sum_probs=22.7
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
+++..|+ +|--|.++|....+.|.+++++.+
T Consensus 16 ~vlITGa-sggiG~~la~~l~~~G~~V~~~~r 46 (266)
T 1xq1_A 16 TVLVTGG-TKGIGHAIVEEFAGFGAVIHTCAR 46 (266)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECC-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 4444454 478999999988889988777654
No 426
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=28.04 E-value=2.8e+02 Score=23.68 Aligned_cols=30 Identities=30% Similarity=0.189 Sum_probs=20.8
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLI 126 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~iv 126 (315)
++++..|+ +|--|.++|..-.+.|.+++++
T Consensus 29 k~~lVTGa-s~GIG~aia~~la~~G~~V~~~ 58 (272)
T 4dyv_A 29 KIAIVTGA-GSGVGRAVAVALAGAGYGVALA 58 (272)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCC-CcHHHHHHHHHHHHCCCEEEEE
Confidence 34443454 4678889998888889886665
No 427
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=28.02 E-value=1.2e+02 Score=26.55 Aligned_cols=36 Identities=17% Similarity=0.142 Sum_probs=21.9
Q ss_pred HHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 90 AVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 90 a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
..++|++.+++ + ........++...+..|.+++.+.
T Consensus 29 la~~Ga~Vvi~-~-~~~~~~~~~~~~l~~~g~~~~~~~ 64 (255)
T 4g81_D 29 LAAAGARVILN-D-IRATLLAESVDTLTRKGYDAHGVA 64 (255)
T ss_dssp HHHTTCEEEEC-C-SCHHHHHHHHHHHHHTTCCEEECC
T ss_pred HHHCCCEEEEE-E-CCHHHHHHHHHHHHhcCCcEEEEE
Confidence 34678765553 3 334455566666777888877653
No 428
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=28.01 E-value=53 Score=29.84 Aligned_cols=29 Identities=7% Similarity=-0.067 Sum_probs=23.6
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
|+..|| |=.|.++|...++.|++++|+=.
T Consensus 9 VvIVGa--G~aGl~~A~~L~~~G~~V~viE~ 37 (399)
T 2x3n_A 9 VLINGC--GIGGAMLAYLLGRQGHRVVVVEQ 37 (399)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEECS
T ss_pred EEEECc--CHHHHHHHHHHHhCCCcEEEEeC
Confidence 444566 77899999999999999888744
No 429
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=28.01 E-value=51 Score=28.86 Aligned_cols=28 Identities=25% Similarity=0.064 Sum_probs=22.5
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
|+..|| |=.|.++|+..++.|++++|+=
T Consensus 5 V~IIGa--G~~Gl~~A~~L~~~G~~V~vlE 32 (336)
T 1yvv_A 5 IAIIGT--GIAGLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEECC--cHHHHHHHHHHHHCCCcEEEEE
Confidence 444566 7789999999999999988773
No 430
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=27.92 E-value=1.8e+02 Score=24.41 Aligned_cols=51 Identities=20% Similarity=0.113 Sum_probs=32.7
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEc
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELIS 158 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~ 158 (315)
.||| |+ +|.-|.++|..-.+.|.+++++.+..... -...++.+|.++..+.
T Consensus 10 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~---------~~~~~~~~~~~~~~~~ 60 (249)
T 2ew8_A 10 AVIT-GG-ANGIGRAIAERFAVEGADIAIADLVPAPE---------AEAAIRNLGRRVLTVK 60 (249)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEEESSCCHH---------HHHHHHHTTCCEEEEE
T ss_pred EEEe-CC-CcHHHHHHHHHHHHCCCEEEEEcCCchhH---------HHHHHHhcCCcEEEEE
Confidence 3454 54 47899999999999999977775433110 0113456787776654
No 431
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=27.90 E-value=58 Score=29.73 Aligned_cols=28 Identities=11% Similarity=0.018 Sum_probs=22.9
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
||..|| |-.|.+.|+..++.|.+++++=
T Consensus 3 VvVIGa--GiaGLsaA~~La~~G~~V~vlE 30 (425)
T 3ka7_A 3 TVVIGA--GLGGLLSAARLSKAGHEVEVFE 30 (425)
T ss_dssp EEEECC--BHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEECC--CHHHHHHHHHHHhCCCceEEEe
Confidence 444566 7889999999999999987773
No 432
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=27.77 E-value=48 Score=31.76 Aligned_cols=27 Identities=19% Similarity=0.215 Sum_probs=22.2
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEE
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLI 126 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~iv 126 (315)
||..|| |-.|.+.|..+++.|.+++|+
T Consensus 44 VvVVGa--G~AGl~AA~~aa~~G~~V~vl 70 (510)
T 4at0_A 44 VVVAGY--GIAGVAASIEAARAGADVLVL 70 (510)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEECC--CHHHHHHHHHHHHCCCcEEEE
Confidence 444566 889999999999999997666
No 433
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=27.75 E-value=2.9e+02 Score=23.75 Aligned_cols=30 Identities=13% Similarity=0.069 Sum_probs=22.1
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
+++..|++ |--|.++|..-.+.|.+++++.
T Consensus 11 ~~lVTGas-~GIG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 11 VALVTGAA-KRLGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp EEEETTCS-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCC-chHHHHHHHHHHHCCCeEEEEc
Confidence 34434554 6789999999889999877765
No 434
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=27.74 E-value=1.2e+02 Score=26.54 Aligned_cols=40 Identities=10% Similarity=0.076 Sum_probs=21.2
Q ss_pred HHHHHHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 86 LMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 86 ll~~a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
+.....++|...++ .+- .......++...+..|.++.++.
T Consensus 47 la~~l~~~G~~V~~-~~r-~~~~~~~~~~~l~~~~~~~~~~~ 86 (301)
T 3tjr_A 47 TATEFARRGARLVL-SDV-DQPALEQAVNGLRGQGFDAHGVV 86 (301)
T ss_dssp HHHHHHHTTCEEEE-EES-CHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHCCCEEEE-EEC-CHHHHHHHHHHHHhcCCceEEEE
Confidence 34444567866444 332 23344455555556677776654
No 435
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=27.67 E-value=2.7e+02 Score=23.35 Aligned_cols=29 Identities=24% Similarity=0.080 Sum_probs=21.5
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
.||| |+ +|--|.++|..-.+.|.+++++-
T Consensus 11 vlVT-Ga-s~gIG~~ia~~l~~~G~~V~~~~ 39 (259)
T 4e6p_A 11 ALIT-GS-ARGIGRAFAEAYVREGATVAIAD 39 (259)
T ss_dssp EEEE-TC-SSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEE-CC-CcHHHHHHHHHHHHCCCEEEEEe
Confidence 4454 54 36789999999999999876653
No 436
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=27.50 E-value=51 Score=29.59 Aligned_cols=30 Identities=23% Similarity=0.336 Sum_probs=23.4
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
|+..|| |=.|.++|+..++.|++++++=..
T Consensus 7 VvIvG~--G~aGl~~A~~La~~G~~V~l~E~~ 36 (397)
T 3cgv_A 7 VLVVGG--GPGGSTAARYAAKYGLKTLMIEKR 36 (397)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECc--CHHHHHHHHHHHHCCCCEEEEeCC
Confidence 444565 678999999999999998887443
No 437
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=27.50 E-value=1.3e+02 Score=27.32 Aligned_cols=35 Identities=6% Similarity=-0.010 Sum_probs=27.6
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 131 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~ 131 (315)
+|..+|-..+|.+++++.+++++|++++++.|+.-
T Consensus 150 ~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~ 184 (307)
T 2i6u_A 150 RLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGF 184 (307)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred EEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccc
Confidence 45445532369999999999999999999998764
No 438
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=27.37 E-value=1.1e+02 Score=28.03 Aligned_cols=35 Identities=9% Similarity=0.133 Sum_probs=27.7
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 131 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~ 131 (315)
+|..+|-..+|.+++++.+++++|++++++.|+.-
T Consensus 169 ~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~ 203 (325)
T 1vlv_A 169 KVVFMGDTRNNVATSLMIACAKMGMNFVACGPEEL 203 (325)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGG
T ss_pred EEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccc
Confidence 45545543379999999999999999999988754
No 439
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=27.37 E-value=59 Score=28.99 Aligned_cols=29 Identities=24% Similarity=0.227 Sum_probs=23.3
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
|+..|| |=.|.++|+..++.|++++++=.
T Consensus 5 vvIIG~--Gi~Gl~~A~~La~~G~~V~vle~ 33 (372)
T 2uzz_A 5 LIIIGS--GSVGAAAGYYATRAGLNVLMTDA 33 (372)
T ss_dssp EEESCT--THHHHHHHHHHHHTTCCEEEECS
T ss_pred EEEECC--CHHHHHHHHHHHHCCCeEEEEec
Confidence 444566 78899999999999999877743
No 440
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=27.35 E-value=59 Score=27.66 Aligned_cols=29 Identities=28% Similarity=0.272 Sum_probs=23.8
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
|+..|| |-.|.++|...++.|++++++=+
T Consensus 5 vvIIG~--G~aGl~aA~~l~~~g~~v~lie~ 33 (297)
T 3fbs_A 5 VIIIGG--SYAGLSAALQLGRARKNILLVDA 33 (297)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEECC--CHHHHHHHHHHHhCCCCEEEEeC
Confidence 444566 78899999999999999988854
No 441
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=27.28 E-value=34 Score=33.82 Aligned_cols=36 Identities=19% Similarity=0.266 Sum_probs=26.5
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcC-CCCCeEEEEeccCC
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLG-TLKAKVHAFSVCDD 258 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~-~~~~rVigV~~~g~ 258 (315)
..+|+|||..|++|..+ +.++. .++.+|.-+|..+.
T Consensus 5 ~~yDyIVVGgG~AG~v~----A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTV----AGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHH----HHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHH----HHHHHhCCCCcEEEEecCCC
Confidence 45899999888876554 34432 36789999998776
No 442
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=26.85 E-value=51 Score=30.05 Aligned_cols=30 Identities=13% Similarity=0.219 Sum_probs=23.7
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
|+..|| |=.|.++|+..++.|++++++=..
T Consensus 8 VvIIGg--G~aGl~~A~~La~~G~~V~v~E~~ 37 (421)
T 3nix_A 8 VLVIGA--GPAGTVAASLVNKSGFKVKIVEKQ 37 (421)
T ss_dssp EEEECC--SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred EEEECC--CHHHHHHHHHHHhCCCCEEEEeCC
Confidence 444566 778999999999999998887443
No 443
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=26.77 E-value=1.2e+02 Score=28.09 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=28.1
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCC
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 131 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~ 131 (315)
+.|+..|+ |..|.-+|...+++|.+++++-+...
T Consensus 171 ~~vvViGg--G~~g~e~A~~l~~~g~~Vtlv~~~~~ 204 (455)
T 1ebd_A 171 KSLVVIGG--GYIGIELGTAYANFGTKVTILEGAGE 204 (455)
T ss_dssp SEEEEECC--SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECC--CHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 56666676 89999999999999999999876543
No 444
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=26.76 E-value=1.1e+02 Score=28.06 Aligned_cols=35 Identities=11% Similarity=0.149 Sum_probs=27.7
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 131 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~ 131 (315)
+|..+|-..+|.+++++.+++++|++++++.|+.-
T Consensus 157 ~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~ 191 (335)
T 1dxh_A 157 SYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKAL 191 (335)
T ss_dssp EEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred EEEEecCCccchHHHHHHHHHHcCCEEEEECCccc
Confidence 45545543369999999999999999999998754
No 445
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=26.64 E-value=3.3e+02 Score=24.08 Aligned_cols=30 Identities=13% Similarity=0.076 Sum_probs=22.4
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
+++..|+ +|--|.++|..-.+.|.+++++.
T Consensus 48 ~~lVTGa-s~GIG~aia~~La~~G~~Vv~~~ 77 (328)
T 2qhx_A 48 VALVTGA-AKRLGRSIAEGLHAEGYAVCLHY 77 (328)
T ss_dssp EEEETTC-SSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECC-CCHHHHHHHHHHHHCCCEEEEEc
Confidence 3443454 47889999999999999877765
No 446
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=26.62 E-value=62 Score=30.35 Aligned_cols=31 Identities=16% Similarity=0.185 Sum_probs=24.5
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
++|...|+ |-.|+.++.+|+++|++++++-+
T Consensus 36 ~~IlIlG~--G~lg~~~~~aa~~lG~~v~v~d~ 66 (419)
T 4e4t_A 36 AWLGMVGG--GQLGRMFCFAAQSMGYRVAVLDP 66 (419)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEECC
Confidence 45555666 67899999999999999887743
No 447
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=26.59 E-value=82 Score=27.87 Aligned_cols=33 Identities=27% Similarity=0.193 Sum_probs=18.4
Q ss_pred HHHcCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 90 AVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 90 a~~~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
..++|++.+++ +- . .-.+..+++.+|-++..+.
T Consensus 49 la~~Ga~V~i~-~r-~---~~~l~~~~~~~g~~~~~~~ 81 (273)
T 4fgs_A 49 FVAEGARVFIT-GR-R---KDVLDAAIAEIGGGAVGIQ 81 (273)
T ss_dssp HHHTTCEEEEE-ES-C---HHHHHHHHHHHCTTCEEEE
T ss_pred HHHCCCEEEEE-EC-C---HHHHHHHHHHcCCCeEEEE
Confidence 34678765554 22 1 2345556677777766553
No 448
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=26.59 E-value=1.5e+02 Score=26.86 Aligned_cols=70 Identities=19% Similarity=0.070 Sum_probs=35.8
Q ss_pred CCCeEEEeCC-chhhHHHHHHH----HhcCCCCCeEEEEeccCCchhhHHHHHHHHhhhcC-CCCCCCeEEecCCccc
Q 021235 220 KFDDIVVACG-SGGTIAGLSLG----SWLGTLKAKVHAFSVCDDPDYFYDYTQGLLDGLNA-GVDSRDIVNIQNVSVY 291 (315)
Q Consensus 220 ~~D~ivv~vG-tGGt~aGl~~~----~k~~~~~~rVigV~~~g~~~~~~~~i~~l~~g~~~-~~~~~dvv~v~e~~~~ 291 (315)
..|.||+..| +|||=+|.+-. .+++ ....++|-+.........+..+-..++.. ...+|-++.|++.+++
T Consensus 95 ~~d~~~i~as~GGGTGSG~~~~la~~a~e~--g~lt~~vv~~P~~~Eg~~~~~nA~~~l~~L~e~~D~~ividNe~L~ 170 (320)
T 1ofu_A 95 GADMVFITTGMGGGTGTGAAPIIAEVAKEM--GILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLL 170 (320)
T ss_dssp TCSEEEEEEETTSSHHHHHHHHHHHHHHHT--TCEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEHHHHH
T ss_pred hCCEEEEEeecCCCccccHHHHHHHHHHhc--CCcEEEEEeCCccccchhHHHHHHHHHHHHHHhCCEEEEEecHHhh
Confidence 3677877766 56666664433 3444 35677777665433221111111112211 1256777877766443
No 449
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=26.42 E-value=1.2e+02 Score=28.16 Aligned_cols=68 Identities=16% Similarity=0.054 Sum_probs=34.6
Q ss_pred CCCeEEEeCC-chhhHHHHH----HHHhcCCCCCeEEEEeccCCchhhHHHHHHHHhhhcC-CCCCCCeEEecCCc
Q 021235 220 KFDDIVVACG-SGGTIAGLS----LGSWLGTLKAKVHAFSVCDDPDYFYDYTQGLLDGLNA-GVDSRDIVNIQNVS 289 (315)
Q Consensus 220 ~~D~ivv~vG-tGGt~aGl~----~~~k~~~~~~rVigV~~~g~~~~~~~~i~~l~~g~~~-~~~~~dvv~v~e~~ 289 (315)
..|.||+..| +|||=+|.+ ..+++++ ...++|-+.........+..+-..++.. ...+|-++.|++.+
T Consensus 105 ~~d~~~i~as~GGGTGSG~ap~la~~~ke~g--~lt~~Vvt~Pf~~Eg~~~~~nA~~~l~~L~e~~D~~ividNea 178 (353)
T 1w5f_A 105 DTHMVFITAGFGGGTGTGASPVIAKIAKEMG--ILTVAIVTTPFYFEGPERLKKAIEGLKKLRKHVDTLIKISNNK 178 (353)
T ss_dssp TCSEEEEEEETTSSHHHHHHHHHHHHHHHTT--CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHH
T ss_pred cCCEEEEEeccCCCccccHHHHHHHHHHHhC--CcEEEEEeCCcccccchhHHHHHHHHHHHHhhCCEEEEEecHH
Confidence 3678888777 666666644 3344443 6677777665433221111111111111 12467777777653
No 450
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=26.40 E-value=1.3e+02 Score=28.35 Aligned_cols=56 Identities=13% Similarity=0.156 Sum_probs=36.5
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCe-EEEEecCCCcccCCCCCccchHHHHHhCCCEEEE
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLD-CYLILRTSKVLVDQDPGLIGNLLVERLVGAHIEL 156 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~-~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~ 156 (315)
++|+..|| ||.|.-+|..+.++|.+ ++++.+..... -|.....+..++..|.++++
T Consensus 265 k~VvVIGg--G~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~---~p~~~~e~~~~~~~Gv~~~~ 321 (456)
T 2vdc_G 265 KHVVVLGG--GDTAMDCVRTAIRQGATSVKCLYRRDRKN---MPGSQREVAHAEEEGVEFIW 321 (456)
T ss_dssp SEEEEECS--SHHHHHHHHHHHHTTCSEEEEECSSCSTT---CSSCHHHHHHHHHTTCEEEC
T ss_pred CEEEEECC--ChhHHHHHHHHHHcCCCEEEEEEeCCccC---CCCCHHHHHHHHHCCCEEEe
Confidence 45666776 89999999999999985 88876554210 01112234556667776654
No 451
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=26.31 E-value=2.1e+02 Score=26.45 Aligned_cols=91 Identities=14% Similarity=0.067 Sum_probs=0.0
Q ss_pred HHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeE
Q 021235 145 LVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDI 224 (315)
Q Consensus 145 ~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~i 224 (315)
..++.+|-++.+|.+.. -.....+++.+.+.+ +-...+.-..+..+. ....++.+++.+ ..+| +
T Consensus 46 ~~l~~~g~r~liVtd~~----~~~~~~~~v~~~L~~-g~~~~~~~~~~~p~~------~~v~~~~~~~~~----~~~d-~ 109 (387)
T 3uhj_A 46 AYLAPLGKRALVLIDRV----LFDALSERIGKSCGD-SLDIRFERFGGECCT------SEIERVRKVAIE----HGSD-I 109 (387)
T ss_dssp HHHGGGCSEEEEEECTT----THHHHHHHC-------CCEEEEEECCSSCSH------HHHHHHHHHHHH----HTCS-E
T ss_pred HHHHHcCCEEEEEECch----HHHHHHHHHHHHHHc-CCCeEEEEcCCCCCH------HHHHHHHHHHhh----cCCC-E
Q ss_pred EEeCCchhhH--HHHHHHHhcCCCCCeEEEEec
Q 021235 225 VVACGSGGTI--AGLSLGSWLGTLKAKVHAFSV 255 (315)
Q Consensus 225 vv~vGtGGt~--aGl~~~~k~~~~~~rVigV~~ 255 (315)
|+++|+|..+ ++.+..++ .++++.|..
T Consensus 110 IIavGGGs~~D~AK~iA~~~----~~p~i~IPT 138 (387)
T 3uhj_A 110 LVGVGGGKTADTAKIVAIDT----GARIVIAPT 138 (387)
T ss_dssp EEEESSHHHHHHHHHHHHHT----TCEEEECCS
T ss_pred EEEeCCcHHHHHHHHHHHhc----CCCEEEecC
No 452
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=26.29 E-value=1.6e+02 Score=25.20 Aligned_cols=33 Identities=12% Similarity=0.201 Sum_probs=24.9
Q ss_pred EEEecCCchhHHHHHHHHHHHHcC-CeEEEEecCC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLN-LDCYLILRTS 130 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lG-l~~~ivvp~~ 130 (315)
+|+..|+ +|+-|.+++......| .+++++.+..
T Consensus 7 ~ilVtGa-tG~iG~~l~~~L~~~g~~~V~~~~R~~ 40 (299)
T 2wm3_A 7 LVVVFGG-TGAQGGSVARTLLEDGTFKVRVVTRNP 40 (299)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHHCSSEEEEEESCT
T ss_pred EEEEECC-CchHHHHHHHHHHhcCCceEEEEEcCC
Confidence 4444454 5899999999888888 8988887653
No 453
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=26.25 E-value=2.4e+02 Score=23.50 Aligned_cols=71 Identities=13% Similarity=-0.029 Sum_probs=0.0
Q ss_pred HHHHHhCCCEEEEEcCCcccccChHHHHHHHHHHHHHhCCCcEEeCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCe
Q 021235 144 LLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDD 223 (315)
Q Consensus 144 ~~~~r~~GAeV~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ 223 (315)
...+...|++|+.+.+...... ....+++.+.+.+..++..+-.++..... +..++.+++ +++|.
T Consensus 30 a~~l~~~G~~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~---~~~~~~~~~------g~id~ 94 (256)
T 3ezl_A 30 CQRLHKDGFRVVAGCGPNSPRR------VKWLEDQKALGFDFYASEGNVGDWDSTKQ---AFDKVKAEV------GEIDV 94 (256)
T ss_dssp HHHHHHTTEEEEEEECTTCSSH------HHHHHHHHHTTCCCEEEECCTTCHHHHHH---HHHHHHHHT------CCEEE
T ss_pred HHHHHHCCCEEEEEeCCCHHHH------HHHHHHHHhcCCeeEEEecCCCCHHHHHH---HHHHHHHhc------CCCCE
Q ss_pred EEEeCC
Q 021235 224 IVVACG 229 (315)
Q Consensus 224 ivv~vG 229 (315)
||..+|
T Consensus 95 lv~~Ag 100 (256)
T 3ezl_A 95 LVNNAG 100 (256)
T ss_dssp EEECCC
T ss_pred EEECCC
No 454
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=26.16 E-value=61 Score=29.05 Aligned_cols=29 Identities=17% Similarity=0.197 Sum_probs=22.8
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
|+..|| |=.|.++|+..++.|++++++=.
T Consensus 6 vvIIGa--G~~Gl~~A~~La~~G~~V~vie~ 34 (389)
T 2gf3_A 6 VIVVGA--GSMGMAAGYQLAKQGVKTLLVDA 34 (389)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEECS
T ss_pred EEEECC--CHHHHHHHHHHHhCCCeEEEEeC
Confidence 444565 77899999999999999777743
No 455
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=26.09 E-value=1.8e+02 Score=27.38 Aligned_cols=55 Identities=13% Similarity=-0.045 Sum_probs=34.8
Q ss_pred EEEecCCchhHHHHHHHHHHHHc------C---------CeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYL------N---------LDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 159 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~l------G---------l~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~ 159 (315)
.+++.|||.+|+..-+++--+.+ | =+.+|+++.... ......++..|++++.++-
T Consensus 142 gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H--------~s~~~~~~~~g~~~~~v~~ 211 (475)
T 3k40_A 142 GVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAH--------SSVERAGLLGGVKLRSVQS 211 (475)
T ss_dssp EEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSC--------HHHHHHHHHHTCEEEEECC
T ss_pred eEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCch--------HHHHHHHHHcCCceEEEEC
Confidence 57888888888765444322211 1 136788876542 2245567778999999974
No 456
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=26.08 E-value=2.5e+02 Score=23.41 Aligned_cols=33 Identities=15% Similarity=0.079 Sum_probs=24.5
Q ss_pred EEEecCCchhHHHHHHHHHHHHcC---CeEEEEecCC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLN---LDCYLILRTS 130 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lG---l~~~ivvp~~ 130 (315)
+++..|+ +|--|.++|....+.| .+++++.+..
T Consensus 23 ~vlITGa-sggIG~~la~~L~~~G~~~~~V~~~~r~~ 58 (267)
T 1sny_A 23 SILITGC-NRGLGLGLVKALLNLPQPPQHLFTTCRNR 58 (267)
T ss_dssp EEEESCC-SSHHHHHHHHHHHTSSSCCSEEEEEESCT
T ss_pred EEEEECC-CCcHHHHHHHHHHhcCCCCcEEEEEecCh
Confidence 3444454 4789999999999999 8888776643
No 457
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=26.07 E-value=57 Score=29.28 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=23.2
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
+.+| .|| |=.|.++|+..++.|++++++=.
T Consensus 7 dVvI-IGg--Gi~Gl~~A~~La~~G~~V~lle~ 36 (382)
T 1y56_B 7 EIVV-IGG--GIVGVTIAHELAKRGEEVTVIEK 36 (382)
T ss_dssp SEEE-ECC--SHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEE-ECC--CHHHHHHHHHHHHCCCeEEEEeC
Confidence 4444 465 78899999999999999766643
No 458
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=26.07 E-value=2.1e+02 Score=24.25 Aligned_cols=13 Identities=8% Similarity=-0.202 Sum_probs=9.8
Q ss_pred CCCeEEEEeccCC
Q 021235 246 LKAKVHAFSVCDD 258 (315)
Q Consensus 246 ~~~rVigV~~~g~ 258 (315)
.+++|..|.+..-
T Consensus 181 ~gi~vn~v~PG~v 193 (264)
T 3ucx_A 181 KGIRVNSVLPGYI 193 (264)
T ss_dssp TTCEEEEEEESSC
T ss_pred cCeEEEEEecCcc
Confidence 4689999888653
No 459
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=25.95 E-value=2.4e+02 Score=24.40 Aligned_cols=33 Identities=18% Similarity=0.104 Sum_probs=20.6
Q ss_pred cCCCEEEecCCchhHHHHHHHHHHHHcCC---eEEEEe
Q 021235 93 QGADCIITIGGIQSNHCRAAAVAAKYLNL---DCYLIL 127 (315)
Q Consensus 93 ~G~~~vVt~g~s~GNhg~alA~aa~~lGl---~~~ivv 127 (315)
.|...||| |++ |--|.++|....+.|. +++++-
T Consensus 32 ~~k~~lVT-Gas-~GIG~aia~~l~~~G~~~~~V~~~~ 67 (287)
T 3rku_A 32 AKKTVLIT-GAS-AGIGKATALEYLEASNGDMKLILAA 67 (287)
T ss_dssp TTCEEEEE-STT-SHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCEEEEe-cCC-ChHHHHHHHHHHHcCCCCceEEEEE
Confidence 34444555 543 6788888877777776 555543
No 460
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=25.93 E-value=1.2e+02 Score=26.00 Aligned_cols=12 Identities=17% Similarity=-0.114 Sum_probs=8.9
Q ss_pred CCCeEEEEeccC
Q 021235 246 LKAKVHAFSVCD 257 (315)
Q Consensus 246 ~~~rVigV~~~g 257 (315)
..++|..|.+..
T Consensus 194 ~gi~v~~v~PG~ 205 (277)
T 2rhc_B 194 TGITVNAVCPGF 205 (277)
T ss_dssp TEEEEEEEEECS
T ss_pred hCcEEEEEecCc
Confidence 468888888764
No 461
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=25.92 E-value=1.3e+02 Score=26.45 Aligned_cols=53 Identities=8% Similarity=0.068 Sum_probs=26.7
Q ss_pred EEecCCchhHHHH--HHHHHHHHcCCeEEEEecCCCcccCCCCCccchHHHHHhCCCEE
Q 021235 98 IITIGGIQSNHCR--AAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHI 154 (315)
Q Consensus 98 vVt~g~s~GNhg~--alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV 154 (315)
+|.|| ++-|-|- .+|..-+..|++++++++...... .+...+.+..+.+|..+
T Consensus 89 lVlcG-~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~---~~a~~~~~~~~~~g~~~ 143 (259)
T 3d3k_A 89 ALLCG-PHVKGAQGISCGRHLANHDVQVILFLPNFVKML---ESITNELSLFSKTQGQQ 143 (259)
T ss_dssp EEEEC-SSHHHHHHHHHHHHHHHTTCEEEEECCBCSSCC---HHHHHHHHHHTTSSCEE
T ss_pred EEEEC-CCCCHHHHHHHHHHHHHCCCeEEEEEecCCCCC---HHHHHHHHHHHHcCCCc
Confidence 45554 4444444 444444557999998876532110 11123455555566554
No 462
>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A*
Probab=25.88 E-value=1.1e+02 Score=28.52 Aligned_cols=45 Identities=20% Similarity=0.144 Sum_probs=28.8
Q ss_pred HHHHHHHHHHcCCeEEEEecCCCcccCCCCCccch---HHHHHhCCCEEEEEcC
Q 021235 109 CRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLIGN---LLVERLVGAHIELISK 159 (315)
Q Consensus 109 g~alA~aa~~lGl~~~ivvp~~~~~~~~~p~~~~n---~~~~r~~GAeV~~v~~ 159 (315)
..++-..|.+.|.++.+|+.++.|. ..|. ...+...|-.+.++.+
T Consensus 194 al~~l~~A~~~gk~~~V~v~EtRP~------~qG~rltA~eL~~~GIpvtlI~D 241 (374)
T 2yvk_A 194 ALAPFYLAKQKDLGLHIYACETRPV------LQGSRLTAWELMQGGIDVTLITD 241 (374)
T ss_dssp TTHHHHHHHHTTCCCEEEEECCTTT------THHHHTHHHHHHTTTCEEEEECG
T ss_pred HHHHHHHHHHcCCEEEEEEeCCCCc------cccHHHHHHHHHHcCCCEEEEeh
Confidence 3455566777788888888777653 2342 3445566777777765
No 463
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=25.80 E-value=64 Score=27.96 Aligned_cols=30 Identities=20% Similarity=0.106 Sum_probs=24.2
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
|+..|| |-.|.++|..+++.|++++++=+.
T Consensus 10 vvIIG~--G~aGl~aA~~l~~~g~~v~lie~~ 39 (332)
T 3lzw_A 10 ITIIGG--GPVGLFTAFYGGMRQASVKIIESL 39 (332)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECC--CHHHHHHHHHHHHCCCCEEEEEcC
Confidence 555576 788999999999999998888543
No 464
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=25.76 E-value=1.9e+02 Score=20.80 Aligned_cols=42 Identities=10% Similarity=-0.137 Sum_probs=28.0
Q ss_pred CCCCeEEEeCCch-hhHHHHHHHHhcCCCCCeEEEEeccCCch
Q 021235 219 VKFDDIVVACGSG-GTIAGLSLGSWLGTLKAKVHAFSVCDDPD 260 (315)
Q Consensus 219 ~~~D~ivv~vGtG-Gt~aGl~~~~k~~~~~~rVigV~~~g~~~ 260 (315)
..||.|++...-. ..-..+...++..+++++|+.+....+..
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~~~ 92 (130)
T 3eod_A 50 FTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMA 92 (130)
T ss_dssp CCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCHH
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCHH
Confidence 4699999987532 22334566777778899999887766543
No 465
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=25.73 E-value=70 Score=29.73 Aligned_cols=32 Identities=9% Similarity=0.053 Sum_probs=26.1
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 130 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~ 130 (315)
.|+..|| |=.|.++|...++.|++++|+=...
T Consensus 24 ~ViIVGa--GpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 24 RIGIVGA--GTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp EEEEECC--HHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CEEEECC--cHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3555676 7889999999999999999986543
No 466
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=25.70 E-value=2.5e+02 Score=25.79 Aligned_cols=49 Identities=12% Similarity=0.123 Sum_probs=29.5
Q ss_pred EEecCCchhHHHHHHHHHHHHc--CCeEEEEecCCCcccCCCCCccchHHHHHhCCCEEEEEcC
Q 021235 98 IITIGGIQSNHCRAAAVAAKYL--NLDCYLILRTSKVLVDQDPGLIGNLLVERLVGAHIELISK 159 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~l--Gl~~~ivvp~~~~~~~~~p~~~~n~~~~r~~GAeV~~v~~ 159 (315)
++|.| ++.+..++..+-.. . ..+++-... ...-...++..|++++.++-
T Consensus 101 ~~t~G---~~~al~~~~~~l~~~~~-d~Vlv~~P~---------y~~~~~~~~~~g~~~~~v~~ 151 (405)
T 3k7y_A 101 IQCIG---GTGAIFVLLEFLKMLNV-ETLYVTNPP---------YINHVNMIESRGFNLKYINF 151 (405)
T ss_dssp EEEEH---HHHHHHHHHHHHHTTTC-CEEEEESSC---------CHHHHHHHHTTTCEEEEECC
T ss_pred EEcCc---hHHHHHHHHHHHHhcCC-CEEEEeCCC---------CHhHHHHHHHcCCeEEEEec
Confidence 45554 55666666554443 5 544443222 23357788999999998863
No 467
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=25.61 E-value=3.4e+02 Score=23.71 Aligned_cols=17 Identities=18% Similarity=0.157 Sum_probs=10.5
Q ss_pred HHHHHHHcCCeEEEEec
Q 021235 112 AAVAAKYLNLDCYLILR 128 (315)
Q Consensus 112 lA~aa~~lGl~~~ivvp 128 (315)
++..|+..|+..+|+.+
T Consensus 108 F~~~~~~aGvdG~IipD 124 (252)
T 3tha_A 108 FVKKAKSLGICALIVPE 124 (252)
T ss_dssp HHHHHHHTTEEEEECTT
T ss_pred HHHHHHHcCCCEEEeCC
Confidence 55666666766666643
No 468
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=25.60 E-value=3e+02 Score=23.13 Aligned_cols=36 Identities=11% Similarity=0.070 Sum_probs=28.5
Q ss_pred CCCeEEEeCCchhhHHHHHHHHhcCCC----CCeEEEEeccC
Q 021235 220 KFDDIVVACGSGGTIAGLSLGSWLGTL----KAKVHAFSVCD 257 (315)
Q Consensus 220 ~~D~ivv~vGtGGt~aGl~~~~k~~~~----~~rVigV~~~g 257 (315)
++|+||+. +..++.|+..++++.+. ++.|+|++-..
T Consensus 188 ~~~ai~~~--~d~~a~g~~~al~~~G~~vP~di~vig~d~~~ 227 (287)
T 3bbl_A 188 RPTAIMTL--NDTMAIGAMAAARERGLTIGTDLAIIGFDDAP 227 (287)
T ss_dssp SCSEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEEEESCCT
T ss_pred CCcEEEEC--CcHHHHHHHHHHHHcCCCCCCCEEEEEECCch
Confidence 68999974 56788999999998763 57799987654
No 469
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=25.57 E-value=61 Score=30.11 Aligned_cols=30 Identities=20% Similarity=0.256 Sum_probs=24.9
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
++|...|| |-.|+.++.+|+++|++++++-
T Consensus 25 ~~I~ilGg--G~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 25 RKVGVLGG--GQLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHTCEEEEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCEEEEEE
Confidence 45655666 6789999999999999998886
No 470
>3i45_A Twin-arginine translocation pathway signal protei; structural genomics; 1.36A {Rhodospirillum rubrum}
Probab=25.57 E-value=3.5e+02 Score=23.87 Aligned_cols=142 Identities=12% Similarity=0.041 Sum_probs=72.5
Q ss_pred cCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCCccc--CCCC-------Cc----cchHHHHHhCCCE-EEEEc
Q 021235 93 QGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLV--DQDP-------GL----IGNLLVERLVGAH-IELIS 158 (315)
Q Consensus 93 ~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~~~~--~~~p-------~~----~~n~~~~r~~GAe-V~~v~ 158 (315)
.+++.|| |..++....+++-.|.+.+++.+.+........ ...+ .. ..-...+..+|.+ |.++.
T Consensus 72 ~~v~aii--G~~~s~~~~a~~~~~~~~~ip~i~~~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~~~vaii~ 149 (387)
T 3i45_A 72 HGVHALA--GTFLSHVGLAVSDFARQRKVLFMASEPLTDALTWEKGNRYTYRLRPSTYMQAAMLAAEAAKLPITRWATIA 149 (387)
T ss_dssp HCCSEEE--ECCSHHHHHHHHHHHHHHTCCEEECSCCCGGGTTTTCCTTEEECSCCHHHHHHHHHHHHTTSSCCEEEEEC
T ss_pred cCCEEEE--CCcchHHHHHHHHHHHHcCceEEecCCCchhhhhccCCCCEEEeCCChHHHHHHHHHHHHHcCCCeEEEEe
Confidence 4888777 344466777888999999999876543221110 0001 00 1112344445654 55554
Q ss_pred C-CcccccChHHHHHHHHHHHHHhCCCcEE-----eCCCCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchh
Q 021235 159 K-EEYSKIGSVTLTNILKEKLLKEGRRPYV-----IPVGGSNSIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGG 232 (315)
Q Consensus 159 ~-~~~~~~~~~~~~~~~~~~l~~~~~~~y~-----ip~g~~n~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGG 232 (315)
. ..|. ....+.+.+.+++.+...-+ ++.+..+ +.....+|.+ .++|.||+.. .+.
T Consensus 150 ~~~~~g----~~~~~~~~~~l~~~~~g~~vv~~~~~~~~~~d------~~~~~~~i~~--------~~~d~v~~~~-~~~ 210 (387)
T 3i45_A 150 PNYEYG----QSAVARFKELLLAARPEVTFVAEQWPALYKLD------AGPTVQALQQ--------AEPEGLFNVL-FGA 210 (387)
T ss_dssp CSSHHH----HHHHHHHHHHHHHHCTTCEEEEEECCCTTCCC------HHHHHHHHHH--------TCCSEEEECC-CTT
T ss_pred CCchHh----HHHHHHHHHHHHHhCCCcEEEeeecCCCCCcC------HHHHHHHHHh--------CCCCEEEEcC-ccH
Confidence 3 2221 12334445556555211211 1222111 2223333322 3588888764 456
Q ss_pred hHHHHHHHHhcCCC--CCeEEEEec
Q 021235 233 TIAGLSLGSWLGTL--KAKVHAFSV 255 (315)
Q Consensus 233 t~aGl~~~~k~~~~--~~rVigV~~ 255 (315)
.+.++.+.+++.+. ++.|++...
T Consensus 211 ~~~~~~~~~~~~g~~~~~~i~~~~~ 235 (387)
T 3i45_A 211 DLPKFVREGRVRGLFAGRQVVSMLT 235 (387)
T ss_dssp HHHHHHHHHHHHTSSTTCEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCCCeEEeecC
Confidence 77888888877653 577877653
No 471
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=25.54 E-value=66 Score=28.75 Aligned_cols=28 Identities=7% Similarity=0.133 Sum_probs=22.9
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
|+..|| |=.|.++|+..++.|++++++=
T Consensus 9 VvVIG~--Gi~Gls~A~~La~~G~~V~vle 36 (363)
T 1c0p_A 9 VVVLGS--GVIGLSSALILARKGYSVHILA 36 (363)
T ss_dssp EEEECC--SHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEECC--CHHHHHHHHHHHhCCCEEEEEe
Confidence 444566 7889999999999999988774
No 472
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=25.53 E-value=57 Score=30.05 Aligned_cols=30 Identities=10% Similarity=0.155 Sum_probs=23.2
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCC-eEEEEec
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNL-DCYLILR 128 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl-~~~ivvp 128 (315)
+.|| .|| |-.|.++|+..++.|+ +++|+=.
T Consensus 8 dVvI-IGg--G~aGlsaA~~La~~G~~~V~vlE~ 38 (438)
T 3dje_A 8 SLLI-VGA--GTWGTSTALHLARRGYTNVTVLDP 38 (438)
T ss_dssp CEEE-ECC--SHHHHHHHHHHHHTTCCCEEEEES
T ss_pred CEEE-ECC--CHHHHHHHHHHHHcCCCcEEEEeC
Confidence 4444 566 7889999999999999 7777643
No 473
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=25.51 E-value=1.5e+02 Score=25.11 Aligned_cols=12 Identities=25% Similarity=0.177 Sum_probs=9.1
Q ss_pred CCCeEEEEeccC
Q 021235 246 LKAKVHAFSVCD 257 (315)
Q Consensus 246 ~~~rVigV~~~g 257 (315)
..++|..|.+..
T Consensus 178 ~gi~vn~v~PG~ 189 (262)
T 1zem_A 178 YNIRVNAISPGY 189 (262)
T ss_dssp GTEEEEEEEECS
T ss_pred hCeEEEEEecCC
Confidence 468898888854
No 474
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=25.45 E-value=1.5e+02 Score=24.86 Aligned_cols=12 Identities=8% Similarity=-0.042 Sum_probs=8.7
Q ss_pred CCCeEEEEeccC
Q 021235 246 LKAKVHAFSVCD 257 (315)
Q Consensus 246 ~~~rVigV~~~g 257 (315)
.+++|..|.+..
T Consensus 176 ~gi~v~~v~PG~ 187 (247)
T 2jah_A 176 RGVRVVVIEPGT 187 (247)
T ss_dssp GTCEEEEEEECS
T ss_pred cCcEEEEEECCC
Confidence 468888888753
No 475
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=25.39 E-value=3e+02 Score=23.06 Aligned_cols=31 Identities=6% Similarity=-0.013 Sum_probs=21.9
Q ss_pred EEEecCCchhH--HHHHHHHHHHHcCCeEEEEecC
Q 021235 97 CIITIGGIQSN--HCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 97 ~vVt~g~s~GN--hg~alA~aa~~lGl~~~ivvp~ 129 (315)
.||| |++ |. -|.++|..-.+.|.+++++.+.
T Consensus 10 vlVT-Gas-g~~GIG~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 10 IVVM-GVA-NKRSIAWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp EEEE-CCC-STTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEE-cCC-CCCcHHHHHHHHHHHCCCEEEEecCc
Confidence 3454 554 34 8899999988999987766543
No 476
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=25.39 E-value=54 Score=29.69 Aligned_cols=29 Identities=14% Similarity=0.139 Sum_probs=22.8
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
|+..|| |=.|.++|...++.|++++|+=.
T Consensus 5 V~IvGa--G~aGl~~A~~L~~~G~~v~v~E~ 33 (394)
T 1k0i_A 5 VAIIGA--GPSGLLLGQLLHKAGIDNVILER 33 (394)
T ss_dssp EEEECC--SHHHHHHHHHHHHHTCCEEEECS
T ss_pred EEEECC--CHHHHHHHHHHHHCCCCEEEEeC
Confidence 333465 67899999999999999888843
No 477
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=25.35 E-value=59 Score=30.51 Aligned_cols=32 Identities=13% Similarity=0.181 Sum_probs=26.7
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
..++.+|+ |.-++++|..++.+|++++++=+.
T Consensus 205 ~rL~IfGA--Ghva~ala~~a~~lg~~V~v~D~R 236 (386)
T 2we8_A 205 PRMLVFGA--IDFAAAVAQQGAFLGYRVTVCDAR 236 (386)
T ss_dssp CEEEEECC--STHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCEEEEECCc
Confidence 35777887 889999999999999999888443
No 478
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=25.34 E-value=65 Score=29.34 Aligned_cols=30 Identities=27% Similarity=0.262 Sum_probs=23.9
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
.|+..|| |=.|.++|...++.|++++|+=.
T Consensus 7 ~V~IVGa--G~aGl~~A~~L~~~G~~v~v~E~ 36 (397)
T 2vou_A 7 RIAVVGG--SISGLTAALMLRDAGVDVDVYER 36 (397)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCEEEEECS
T ss_pred cEEEECC--CHHHHHHHHHHHhCCCCEEEEec
Confidence 3444565 77899999999999999888843
No 479
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=25.33 E-value=3.1e+02 Score=23.25 Aligned_cols=33 Identities=15% Similarity=0.135 Sum_probs=23.8
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecCC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTS 130 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~ 130 (315)
+++..|++ |--|.++|..-.+.|.+++++.+..
T Consensus 14 ~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~ 46 (311)
T 3o26_A 14 CAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDV 46 (311)
T ss_dssp EEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34334544 6789999999999999877776543
No 480
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=25.22 E-value=2.1e+02 Score=21.27 Aligned_cols=43 Identities=14% Similarity=-0.007 Sum_probs=30.5
Q ss_pred CCCCeEEEeCCc-hhhHHHHHHHHhcCCCCCeEEEEeccCCchh
Q 021235 219 VKFDDIVVACGS-GGTIAGLSLGSWLGTLKAKVHAFSVCDDPDY 261 (315)
Q Consensus 219 ~~~D~ivv~vGt-GGt~aGl~~~~k~~~~~~rVigV~~~g~~~~ 261 (315)
..||.|++...- +..-.-+...++...++++|+.+....+...
T Consensus 65 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~ 108 (150)
T 4e7p_A 65 ESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKRAGY 108 (150)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCCHHH
Confidence 469999998763 3333456777777789999998887765543
No 481
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=25.16 E-value=2.6e+02 Score=23.07 Aligned_cols=29 Identities=21% Similarity=0.007 Sum_probs=22.2
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
+|| |+ +|.-|.++|....+.|.+++++.+
T Consensus 6 lIt-Ga-sggiG~~~a~~l~~~G~~V~~~~r 34 (250)
T 2cfc_A 6 IVT-GA-SSGNGLAIATRFLARGDRVAALDL 34 (250)
T ss_dssp EEE-TT-TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEe-CC-CchHHHHHHHHHHHCCCEEEEEeC
Confidence 454 54 478999999999999988777654
No 482
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=25.15 E-value=58 Score=28.35 Aligned_cols=30 Identities=17% Similarity=0.130 Sum_probs=24.1
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
.|+..|| |=.|.++|...++.|++++++=+
T Consensus 24 ~vvIIG~--G~aGl~aA~~l~~~g~~v~vie~ 53 (338)
T 3itj_A 24 KVTIIGS--GPAAHTAAIYLARAEIKPILYEG 53 (338)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCCCEEECC
T ss_pred CEEEECc--CHHHHHHHHHHHHCCCCEEEEec
Confidence 3555576 78899999999999999888754
No 483
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=25.12 E-value=3.7e+02 Score=25.80 Aligned_cols=130 Identities=15% Similarity=0.055 Sum_probs=65.9
Q ss_pred HHHHHHHHcCCeEEEE---ecCCCcccCCCCCcc--chHHHHHhCCCEEEEEcCCc----ccccChHHHHHHHHHHHHHh
Q 021235 111 AAAVAAKYLNLDCYLI---LRTSKVLVDQDPGLI--GNLLVERLVGAHIELISKEE----YSKIGSVTLTNILKEKLLKE 181 (315)
Q Consensus 111 alA~aa~~lGl~~~iv---vp~~~~~~~~~p~~~--~n~~~~r~~GAeV~~v~~~~----~~~~~~~~~~~~~~~~l~~~ 181 (315)
.+..+|+..|.+++.- +.+-... +.|+.. ..+.-.-.-|++-+..+.+. |-. ...+.+.+++++.++.
T Consensus 262 ~ii~~araaGkpvI~ATQMLeSMi~~--p~PTRAEvsDVanAV~dG~DavMLSgETA~G~yPv-eaV~~m~~I~~~~E~~ 338 (470)
T 1e0t_A 262 MMIEKCIRARKVVITATMMLDSMIKN--PRPTDAEAGDVANAILDGTDAVMLSGESAKGKYPL-EAVSIMATICERTDRV 338 (470)
T ss_dssp HHHHHHHHHTCEEEEECC-----------CCCHHHHHHHHHHHHHTCSEEEECCC------CH-HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEechhhHhhccC--CCccHHHHhhhhHhhhcCccEEEecccccCCCCHH-HHHHHHHHHHHHHHhh
Confidence 3567899999997662 2221111 112211 11333334599988887532 321 1234455555554432
Q ss_pred CCCcEEeCCC-CCc-hhhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEecc
Q 021235 182 GRRPYVIPVG-GSN-SIGTWGYIEAIKEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVC 256 (315)
Q Consensus 182 ~~~~y~ip~g-~~n-~~~~~G~~t~a~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~ 256 (315)
. .|...+. ... ..........+.++.+.+. ..+||+.+-||.|+-=+++ ..|+..|+++.+.
T Consensus 339 ~--~~~~~~~~~~~~~~~~~aia~aa~~~a~~l~-------a~aIv~~T~sG~ta~~isr----~RP~~pI~a~t~~ 402 (470)
T 1e0t_A 339 M--NSRLEFNNDNRKLRITEAVCRGAVETAEKLD-------APLIVVATQGGKSARAVRK----YFPDATILALTTN 402 (470)
T ss_dssp C--CCCCC---------CHHHHHHHHHHHHHHTT-------CSBEEEECSSSHHHHHHHT----TCCSSBEEEEESC
T ss_pred h--hhhHHHhhhccccchHHHHHHHHHHHHHhcC-------CCEEEEECCChhHHHHHHh----hCCCCCEEEECCC
Confidence 1 1110000 000 1111223334566766653 6799999999998765553 4589999999875
No 484
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=25.11 E-value=70 Score=29.14 Aligned_cols=67 Identities=16% Similarity=0.054 Sum_probs=40.2
Q ss_pred HHHHHHHhcCCCCCCCCeEEEeCCchhhHHHHHHHHhc---------CCCCCeEEEEeccCCc---hhhHHHHHHHHhhh
Q 021235 206 KEIEQQLQTGTGGVKFDDIVVACGSGGTIAGLSLGSWL---------GTLKAKVHAFSVCDDP---DYFYDYTQGLLDGL 273 (315)
Q Consensus 206 ~EI~~Q~~~~~~~~~~D~ivv~vGtGGt~aGl~~~~k~---------~~~~~rVigV~~~g~~---~~~~~~i~~l~~g~ 273 (315)
.++.+++... .++|+|+.+.-|+-.++-++.+.+. .+|...+--||+.... ....+.+..++..+
T Consensus 103 ~~lf~~l~~~---~~~~aIlaSNTSsl~is~ia~~~~~p~r~ig~HffNP~~~m~LVEiv~g~~Ts~~~~~~~~~~~~~~ 179 (319)
T 3ado_A 103 RKIFAQLDSI---VDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPETSPATVDRTHALMRKI 179 (319)
T ss_dssp HHHHHHHHTT---CCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH---hhhcceeehhhhhccchhhhhhccCCCcEEEecCCCCccccchHHhcCCCCCcHHHHHHHHHHHHHh
Confidence 4555555432 4689999999999999988877653 1233222234444322 23355566677777
Q ss_pred cC
Q 021235 274 NA 275 (315)
Q Consensus 274 ~~ 275 (315)
|.
T Consensus 180 gk 181 (319)
T 3ado_A 180 GQ 181 (319)
T ss_dssp TC
T ss_pred CC
Confidence 74
No 485
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=25.10 E-value=41 Score=33.30 Aligned_cols=35 Identities=17% Similarity=0.137 Sum_probs=26.4
Q ss_pred CCCCeEEEeCCchhhHHHHHHHHhcC-CCCCeEEEEeccC
Q 021235 219 VKFDDIVVACGSGGTIAGLSLGSWLG-TLKAKVHAFSVCD 257 (315)
Q Consensus 219 ~~~D~ivv~vGtGGt~aGl~~~~k~~-~~~~rVigV~~~g 257 (315)
..+|+|||..|++|.. .+.++. .++.+|.-+|..+
T Consensus 18 ~~yDyIIVGgG~AG~v----lA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLT----TAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHH----HHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHH----HHHHHHhCCCCcEEEEecCC
Confidence 3589999988876654 445544 4789999999887
No 486
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=25.09 E-value=1e+02 Score=30.01 Aligned_cols=32 Identities=31% Similarity=0.313 Sum_probs=24.9
Q ss_pred cCCCEEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 93 QGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 93 ~G~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
...+.|| .|| |=.|.++|+.+++.|++++++=
T Consensus 31 ~~~DVvV-IGg--Gi~G~~~A~~La~rG~~V~LlE 62 (571)
T 2rgh_A 31 EELDLLI-IGG--GITGAGVAVQAAASGIKTGLIE 62 (571)
T ss_dssp SCBSEEE-ECC--SHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCCEEE-ECc--CHHHHHHHHHHHHCCCcEEEEe
Confidence 3456555 465 7889999999999999977773
No 487
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=25.05 E-value=68 Score=27.60 Aligned_cols=30 Identities=20% Similarity=0.151 Sum_probs=24.2
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEec
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILR 128 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp 128 (315)
.|+..|| |-.|.++|..+++.|++++++=+
T Consensus 17 ~vvIIG~--G~aGl~aA~~l~~~g~~v~lie~ 46 (323)
T 3f8d_A 17 DVIIVGL--GPAAYGAALYSARYMLKTLVIGE 46 (323)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEECc--cHHHHHHHHHHHHCCCcEEEEec
Confidence 3555676 78899999999999999877754
No 488
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=24.97 E-value=1.5e+02 Score=25.14 Aligned_cols=12 Identities=25% Similarity=0.158 Sum_probs=9.2
Q ss_pred CCCeEEEEeccC
Q 021235 246 LKAKVHAFSVCD 257 (315)
Q Consensus 246 ~~~rVigV~~~g 257 (315)
..++|..|.+..
T Consensus 182 ~gi~vn~v~PG~ 193 (262)
T 3pk0_A 182 HKITVNAIMPGN 193 (262)
T ss_dssp GTCEEEEEEECS
T ss_pred hCcEEEEEEeCc
Confidence 368999988864
No 489
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=24.95 E-value=1.5e+02 Score=25.23 Aligned_cols=12 Identities=0% Similarity=-0.100 Sum_probs=9.1
Q ss_pred CCCeEEEEeccC
Q 021235 246 LKAKVHAFSVCD 257 (315)
Q Consensus 246 ~~~rVigV~~~g 257 (315)
..++|..|.+..
T Consensus 192 ~gI~vn~v~PG~ 203 (266)
T 4egf_A 192 HGIRANSVCPTV 203 (266)
T ss_dssp GTEEEEEEEESC
T ss_pred hCeEEEEEEeCC
Confidence 368998888864
No 490
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=24.92 E-value=75 Score=27.80 Aligned_cols=30 Identities=7% Similarity=0.026 Sum_probs=24.2
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
++|...|+ |+.|.++|..++..|++++++-
T Consensus 5 ~kV~VIGa--G~mG~~iA~~la~~G~~V~l~d 34 (283)
T 4e12_A 5 TNVTVLGT--GVLGSQIAFQTAFHGFAVTAYD 34 (283)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEe
Confidence 34555565 8999999999999999887763
No 491
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=24.92 E-value=59 Score=30.45 Aligned_cols=30 Identities=30% Similarity=0.338 Sum_probs=23.7
Q ss_pred CCEEEecCCchhHHHHHHHHHHHHcCCeEEEEe
Q 021235 95 ADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 127 (315)
Q Consensus 95 ~~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivv 127 (315)
.+.|| .|| |-.|.++|..+++.|++++++=
T Consensus 27 ~dVvI-IGg--G~aGl~aA~~la~~G~~V~llE 56 (447)
T 2i0z_A 27 YDVIV-IGG--GPSGLMAAIGAAEEGANVLLLD 56 (447)
T ss_dssp CSEEE-ECC--SHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCEEE-ECC--cHHHHHHHHHHHHCCCCEEEEE
Confidence 45455 566 7889999999999999887774
No 492
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=24.90 E-value=60 Score=29.58 Aligned_cols=31 Identities=19% Similarity=0.157 Sum_probs=24.8
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
.|+..|| |=.|.++|...++.|++++|+=..
T Consensus 28 dV~IVGa--G~aGl~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 28 NVAIIGG--GPVGLTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp EEEEECC--SHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CEEEECC--CHHHHHHHHHHHHCCCCEEEEeCC
Confidence 4555566 778999999999999999888544
No 493
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=24.88 E-value=3e+02 Score=22.94 Aligned_cols=28 Identities=14% Similarity=0.111 Sum_probs=20.8
Q ss_pred EEEecCCchhHHHHHHHHHHHHcCCeEEEE
Q 021235 97 CIITIGGIQSNHCRAAAVAAKYLNLDCYLI 126 (315)
Q Consensus 97 ~vVt~g~s~GNhg~alA~aa~~lGl~~~iv 126 (315)
.||| |+ +|--|.++|....+.|.+++++
T Consensus 9 vlVT-Ga-s~gIG~a~a~~l~~~G~~V~~~ 36 (247)
T 3rwb_A 9 ALVT-GA-AQGIGKAIAARLAADGATVIVS 36 (247)
T ss_dssp EEEE-TT-TSHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEE-CC-CCHHHHHHHHHHHHCCCEEEEE
Confidence 3454 54 3678999999999999886664
No 494
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=24.88 E-value=1.2e+02 Score=28.37 Aligned_cols=34 Identities=12% Similarity=0.051 Sum_probs=28.2
Q ss_pred CEEEecCCchhHHHHHHHHHHHHcCCeEEEEecCCC
Q 021235 96 DCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSK 131 (315)
Q Consensus 96 ~~vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~~~ 131 (315)
+.|+..|| |+.|.-+|...+++|.+++++.+...
T Consensus 184 ~~vvViGg--G~~g~e~A~~l~~~g~~Vtlv~~~~~ 217 (478)
T 1v59_A 184 KRLTIIGG--GIIGLEMGSVYSRLGSKVTVVEFQPQ 217 (478)
T ss_dssp SEEEEECC--SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECC--CHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 45666676 89999999999999999999976543
No 495
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=24.85 E-value=68 Score=28.04 Aligned_cols=30 Identities=17% Similarity=0.252 Sum_probs=24.1
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEEecC
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLILRT 129 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~ivvp~ 129 (315)
|+..|| |-.|.++|...++.|++++++=+.
T Consensus 6 vvIIG~--G~aGl~~A~~l~~~g~~v~vie~~ 35 (357)
T 4a9w_A 6 VVVIGG--GQSGLSAGYFLRRSGLSYVILDAE 35 (357)
T ss_dssp EEEECC--SHHHHHHHHHHHHSSCCEEEECCS
T ss_pred EEEECc--CHHHHHHHHHHHHCCCCEEEEECC
Confidence 444566 788999999999999998888544
No 496
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=24.85 E-value=1.3e+02 Score=26.05 Aligned_cols=12 Identities=17% Similarity=0.105 Sum_probs=8.9
Q ss_pred CCCeEEEEeccC
Q 021235 246 LKAKVHAFSVCD 257 (315)
Q Consensus 246 ~~~rVigV~~~g 257 (315)
.+++|..|.|..
T Consensus 201 ~gI~vn~v~PG~ 212 (283)
T 3v8b_A 201 HHIRVNAVCPGA 212 (283)
T ss_dssp TTEEEEEEEECS
T ss_pred cCcEEEEEEeCC
Confidence 468898888753
No 497
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=24.67 E-value=75 Score=27.90 Aligned_cols=40 Identities=13% Similarity=0.092 Sum_probs=27.2
Q ss_pred CCeEEEeCCchhhHHHHHHHHhcCCCCCeEEEEeccCCchhh
Q 021235 221 FDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFSVCDDPDYF 262 (315)
Q Consensus 221 ~D~ivv~vGtGGt~aGl~~~~k~~~~~~rVigV~~~g~~~~~ 262 (315)
+| +|+++|+=||+..++..+....+++.|+||. .|..-|+
T Consensus 36 ~D-~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn-~G~lgfl 75 (272)
T 2i2c_A 36 PE-IVISIGGDGTFLSAFHQYEERLDEIAFIGIH-TGHLGFY 75 (272)
T ss_dssp CS-EEEEEESHHHHHHHHHHTGGGTTTCEEEEEE-SSSCCSS
T ss_pred CC-EEEEEcCcHHHHHHHHHHhhcCCCCCEEEEe-CCCCCcC
Confidence 44 5666777778877787776443578999994 5654443
No 498
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=24.58 E-value=2.8e+02 Score=23.22 Aligned_cols=12 Identities=17% Similarity=0.138 Sum_probs=9.1
Q ss_pred CCCeEEEEeccC
Q 021235 246 LKAKVHAFSVCD 257 (315)
Q Consensus 246 ~~~rVigV~~~g 257 (315)
.+++|..|.+..
T Consensus 173 ~gi~v~~v~PG~ 184 (256)
T 1geg_A 173 LGITVNGYCPGI 184 (256)
T ss_dssp GTEEEEEEEECS
T ss_pred cCeEEEEEEECC
Confidence 368888888864
No 499
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=24.51 E-value=73 Score=29.19 Aligned_cols=27 Identities=7% Similarity=0.020 Sum_probs=22.1
Q ss_pred EEecCCchhHHHHHHHHHHHHcCCeEEEE
Q 021235 98 IITIGGIQSNHCRAAAVAAKYLNLDCYLI 126 (315)
Q Consensus 98 vVt~g~s~GNhg~alA~aa~~lGl~~~iv 126 (315)
||..|| |-.|.+.|+..++.|++++++
T Consensus 3 VvVIGa--GiaGLsaA~~La~~G~~V~vl 29 (421)
T 3nrn_A 3 AVVVGA--GLGGLLAGAFLARNGHEIIVL 29 (421)
T ss_dssp EEEESC--SHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECC--CHHHHHHHHHHHHCCCeEEEE
Confidence 444566 788999999999999997766
No 500
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=24.43 E-value=2.2e+02 Score=25.11 Aligned_cols=14 Identities=29% Similarity=0.128 Sum_probs=5.9
Q ss_pred HHHHHhCCCcEEeC
Q 021235 176 EKLLKEGRRPYVIP 189 (315)
Q Consensus 176 ~~l~~~~~~~y~ip 189 (315)
.+|.+.+-...+++
T Consensus 154 ~~L~~~gI~vtli~ 167 (276)
T 1vb5_A 154 RELEFSGIEFEVIT 167 (276)
T ss_dssp HHHHHTTCCEEEEC
T ss_pred HHHHHCCCCEEEEc
Confidence 34444443344443
Done!