Query 021237
Match_columns 315
No_of_seqs 311 out of 2185
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 14:45:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021237.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021237hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rpc_A Possible metal-dependen 100.0 2.7E-35 9.4E-40 267.0 20.1 223 77-312 3-252 (264)
2 3kl7_A Putative metal-dependen 100.0 5.5E-32 1.9E-36 241.6 23.1 196 75-309 26-227 (235)
3 2wyl_A L-ascorbate-6-phosphate 100.0 2.9E-29 1E-33 237.2 24.9 214 73-296 32-287 (360)
4 3bv6_A Metal-dependent hydrola 100.0 4E-29 1.4E-33 238.0 22.7 214 73-296 56-312 (379)
5 1vjn_A Zn-dependent hydrolase 99.9 5.8E-23 2E-27 181.4 18.3 175 77-307 11-193 (220)
6 1zkp_A Hypothetical protein BA 99.9 2.7E-22 9.2E-27 181.2 20.1 191 75-295 21-240 (268)
7 3zwf_A Zinc phosphodiesterase 99.9 1E-21 3.6E-26 186.1 15.2 195 79-296 1-317 (368)
8 1y44_A Ribonuclease Z; zinc-de 99.9 7.7E-21 2.6E-25 175.9 17.9 188 79-294 1-273 (320)
9 2cbn_A Ribonuclease Z; phospho 99.9 4E-21 1.4E-25 176.5 15.7 189 79-295 2-276 (306)
10 3g1p_A Protein PHNP; C-P lyase 99.8 1.7E-20 5.9E-25 168.8 16.5 177 84-294 37-226 (258)
11 3md7_A Beta-lactamase-like; ss 99.8 1.1E-20 3.6E-25 173.5 12.4 174 87-295 64-267 (293)
12 2ycb_A Beta-CAsp RNAse, cleava 99.7 1.8E-18 6.1E-23 174.7 7.6 253 11-291 112-417 (636)
13 2e7y_A TRNAse Z; tRNA maturati 99.7 2.1E-17 7.1E-22 149.4 12.2 185 84-294 8-248 (280)
14 3jxp_A Coenzyme PQQ synthesis 99.7 8.6E-18 2.9E-22 156.3 9.6 193 84-295 39-276 (321)
15 2xr1_A Cleavage and polyadenyl 99.7 6.2E-17 2.1E-21 163.5 13.0 252 11-291 116-420 (640)
16 3iek_A Ribonuclease TTHA0252; 99.7 4.6E-16 1.6E-20 150.2 15.5 185 79-291 1-224 (431)
17 2az4_A Hypothetical protein EF 99.7 2.3E-15 7.7E-20 144.9 18.3 199 77-293 5-262 (429)
18 2i7t_A Cleavage and polyadenyl 99.7 3.5E-15 1.2E-19 145.0 18.7 187 76-289 9-240 (459)
19 3af5_A Putative uncharacterize 99.6 7.1E-16 2.4E-20 156.1 12.0 218 11-257 121-393 (651)
20 3m8t_A 'BLR6230 protein; subcl 99.6 4.9E-16 1.7E-20 141.4 6.8 180 84-299 53-251 (294)
21 3bk2_A RNAse J, metal dependen 99.6 5E-15 1.7E-19 147.5 14.5 165 75-257 13-212 (562)
22 3zq4_A Ribonuclease J 1, RNAse 99.6 1.3E-14 4.4E-19 144.2 17.0 193 76-289 6-230 (555)
23 4ax1_B Metallo-beta-lactamase 99.5 1.3E-14 4.4E-19 132.3 9.3 180 84-296 56-256 (303)
24 3hnn_A Putative diflavin flavo 99.5 4.6E-15 1.6E-19 133.6 6.2 191 87-306 44-249 (262)
25 2i7x_A Protein CFT2; polyadeny 99.5 2.1E-14 7E-19 146.5 11.0 185 85-292 14-251 (717)
26 4efz_A Metallo-beta-lactamase 99.5 1.2E-14 4.2E-19 133.3 6.7 190 76-291 2-217 (298)
27 2r2d_A AGR_PTI_140P, Zn-depend 99.5 6.1E-13 2.1E-17 119.8 14.2 144 80-243 37-219 (276)
28 3esh_A Protein similar to meta 99.5 2E-13 6.7E-18 123.8 11.0 184 81-296 43-257 (280)
29 4b87_A DNA cross-LINK repair 1 99.5 1.3E-13 4.6E-18 130.2 9.8 163 91-297 32-209 (367)
30 3adr_A Putative uncharacterize 99.5 3.8E-13 1.3E-17 120.1 12.1 163 86-295 20-212 (261)
31 3l6n_A Metallo-beta-lactamase; 99.5 4.4E-13 1.5E-17 116.7 11.9 173 83-297 28-207 (219)
32 4ad9_A Lactb2, beta-lactamase- 99.5 7.7E-14 2.7E-18 127.0 7.3 173 82-296 28-206 (289)
33 1k07_A FEZ-1 beta-lactamase; m 99.4 8.2E-14 2.8E-18 125.0 7.1 180 85-298 24-223 (263)
34 1m2x_A Class B carbapenemase B 99.4 3.7E-13 1.3E-17 117.8 10.2 170 83-295 24-201 (223)
35 2ohh_A Type A flavoprotein FPR 99.4 3.9E-13 1.3E-17 127.8 10.9 194 86-305 35-249 (404)
36 2zwr_A Metallo-beta-lactamase 99.4 1.2E-13 4.2E-18 119.6 6.4 166 84-297 11-191 (207)
37 2zo4_A Metallo-beta-lactamase 99.4 3.1E-13 1E-17 124.4 8.4 176 85-296 21-239 (317)
38 1e5d_A Rubredoxin\:oxygen oxid 99.4 4.8E-13 1.6E-17 127.0 9.5 176 85-295 34-231 (402)
39 2vw8_A PA1000, PQSE; quinolone 99.4 5E-13 1.7E-17 122.4 8.3 176 85-296 23-229 (303)
40 2xf4_A Hydroxyacylglutathione 99.4 1.1E-13 3.7E-18 119.9 3.4 168 80-296 7-198 (210)
41 3tp9_A Beta-lactamase and rhod 99.4 2.1E-13 7E-18 133.0 5.3 179 78-291 3-200 (474)
42 1a7t_A Metallo-beta-lactamase; 99.4 3.1E-13 1E-17 119.1 5.9 172 83-296 34-212 (232)
43 1p9e_A Methyl parathion hydrol 99.4 8.1E-13 2.8E-17 123.0 9.0 176 83-294 94-306 (331)
44 1sml_A Protein (penicillinase) 99.4 6.4E-13 2.2E-17 119.5 8.0 176 85-297 37-232 (269)
45 1ycg_A Nitric oxide reductase; 99.4 9.4E-13 3.2E-17 124.9 9.4 185 86-304 36-243 (398)
46 3iog_A Beta-lactamase; hydrola 99.4 1.4E-13 4.6E-18 120.4 3.0 177 83-305 20-219 (227)
47 4dik_A Flavoprotein; TM0755, e 99.4 3.2E-12 1.1E-16 122.4 12.7 194 87-307 53-259 (410)
48 2gcu_A Putative hydroxyacylglu 99.4 1.5E-12 5.2E-17 116.2 9.6 163 85-294 14-187 (245)
49 2bib_A CBPE, teichoic acid pho 99.4 3.2E-12 1.1E-16 126.7 12.6 198 76-291 3-254 (547)
50 1mqo_A Beta-lactamase II; alph 99.4 3.3E-13 1.1E-17 118.4 4.4 172 83-296 38-216 (227)
51 2qed_A Hydroxyacylglutathione 99.4 6.8E-13 2.3E-17 119.4 6.5 163 76-294 5-176 (258)
52 4hl2_A Beta-lactamase NDM-1; s 99.4 3.9E-13 1.3E-17 119.2 4.9 178 82-303 44-235 (243)
53 2q9u_A A-type flavoprotein; fl 99.3 1.7E-12 5.8E-17 124.0 9.1 183 85-295 40-235 (414)
54 3q6v_A Beta-lactamase; metallo 99.3 4.9E-13 1.7E-17 117.2 4.3 176 84-305 24-226 (233)
55 3dha_A N-acyl homoserine lacto 99.3 3.8E-12 1.3E-16 113.3 9.2 144 81-243 34-201 (254)
56 1xm8_A Glyoxalase II; structur 99.3 1.8E-12 6.3E-17 116.3 6.8 162 83-294 8-173 (254)
57 3r2u_A Metallo-beta-lactamase 99.3 4E-12 1.4E-16 123.8 8.5 185 76-291 22-220 (466)
58 1jjt_A IMP-1 metallo beta-lact 99.3 4.1E-12 1.4E-16 111.6 7.5 170 83-297 30-204 (228)
59 1qh5_A Glyoxalase II, protein 99.3 3.3E-12 1.1E-16 115.0 6.0 158 86-294 12-177 (260)
60 3zdk_A 5' exonuclease apollo; 99.3 9.1E-11 3.1E-15 109.5 15.3 145 132-291 23-183 (336)
61 2y8b_A Metallo-B-lactamase; hy 99.2 9.6E-12 3.3E-16 112.0 8.0 170 83-295 65-244 (265)
62 2p18_A Glyoxalase II; metallop 99.2 1.3E-11 4.3E-16 114.1 8.3 181 77-295 27-231 (311)
63 3aj3_A MLR6805 protein, 4-pyri 99.2 2.4E-11 8.3E-16 109.3 9.9 140 81-242 30-212 (274)
64 1ztc_A Hypothetical protein TM 99.2 3.2E-11 1.1E-15 105.5 7.7 167 84-296 33-217 (221)
65 2fhx_A SPM-1; metallo-beta-lac 99.2 1.2E-11 4.3E-16 109.3 4.3 166 85-295 29-226 (246)
66 2p97_A Hypothetical protein; p 99.2 9.3E-11 3.2E-15 101.1 9.3 170 84-305 22-198 (201)
67 4eyb_A Beta-lactamase NDM-1; m 99.1 7.7E-11 2.6E-15 106.4 5.7 169 84-295 73-255 (270)
68 2p4z_A Metal-dependent hydrola 99.0 1.7E-10 5.7E-15 105.1 5.1 182 86-296 33-261 (284)
69 2cfu_A SDSA1; SDS-hydrolase, l 99.0 7E-10 2.4E-14 112.2 7.9 172 86-295 123-349 (658)
70 2yhe_A SEC-alkyl sulfatase; hy 98.2 1.5E-09 5.2E-14 109.7 0.0 73 86-170 133-210 (668)
71 3h3e_A Uncharacterized protein 98.2 3.8E-06 1.3E-10 75.6 8.5 180 87-302 33-248 (267)
72 3zdk_A 5' exonuclease apollo; 51.7 8.8 0.0003 34.9 3.1 28 268-295 277-304 (336)
73 3bk2_A RNAse J, metal dependen 47.2 13 0.00044 36.3 3.6 44 265-309 380-423 (562)
74 2az4_A Hypothetical protein EF 31.9 30 0.001 32.0 3.4 30 266-295 380-409 (429)
75 3zq4_A Ribonuclease J 1, RNAse 31.6 22 0.00075 34.6 2.5 44 265-309 365-408 (555)
76 2i7t_A Cleavage and polyadenyl 20.5 61 0.0021 30.3 3.2 38 266-303 394-431 (459)
77 1whz_A Hypothetical protein; a 20.3 38 0.0013 22.8 1.3 28 285-314 39-68 (70)
No 1
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=100.00 E-value=2.7e-35 Score=267.04 Aligned_cols=223 Identities=13% Similarity=0.180 Sum_probs=167.0
Q ss_pred CceEEEEEeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCC-ccccC----CCCCCCCC-CCCEEEEcCCCCCCCChh
Q 021237 77 DVFKLTYLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAG-KKFLK----SFQLSDLP-QVDCLLITQSLDDHCHLK 150 (315)
Q Consensus 77 ~~~~itwlGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~-~~~~~----~~~~~~lp-~iD~VlISH~H~DHld~~ 150 (315)
..|+|||+||||++|+.+|.+|||||++++++++ .++.+... +++.+ ++.+++++ ++|+|||||.|+||++..
T Consensus 3 ~~m~it~lGha~~li~~~g~~iLiDp~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~id~iliTH~H~DH~~~~ 81 (264)
T 3rpc_A 3 AMTQYTHIRNATGKLTIKNTTFLIDPFLAPKDTY-PGFEGTFNYQQRMPMVDLPLSMDDLLSNVTAVVVTHTHLDHWDDT 81 (264)
T ss_dssp CCCEEEEEETTEEEEEETTEEEEESCCCCCTTCB-CCCTTBTTTTSCBSSSCCSSCHHHHHTTCCEEECSCCCGGGSCHH
T ss_pred ceEEEEEEeCcEEEEEECCEEEEeCcccCCCcCc-cCCCCcccccccCCCCCCCCCHHHccccCCEEEECCCchhhCCCH
Confidence 3589999999999999999999999999987763 23322100 11111 35566665 899999999999998654
Q ss_pred cHHHhhhhCCCceEEEc-CChHHHHhhcC-CceEEeCCCceEEecccCCCcEEEEEeecCCcCC-CC--------CCCcc
Q 021237 151 TLKPLSKMSPNLKVIAT-PNAKTLLDPLF-QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGP-PW--------QRPEN 219 (315)
Q Consensus 151 tl~~l~~~~p~~~v~~~-p~~~~~l~~~~-~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~-~~--------~~~~~ 219 (315)
++..+ + .++++|++ +....++++++ .++..+ +++++++ +++|+++|++|+.. .+ ...|+
T Consensus 82 ~~~~~--~-~~~~v~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~-----~~~i~~~pa~H~~~~~~~~p~~~~~~~~~~ 151 (264)
T 3rpc_A 82 AINSI--P-KSLPIFVQNTADKELITSQGFIDVRII--FESLEFN-----GITLRKTGGSHGTVEMYANPVLAPLAGDAM 151 (264)
T ss_dssp HHHHS--C-TTSCEEESSHHHHHHHHHTTCSCEEEC--SSEEEET-----TEEEEEECCCSSCHHHHTSTTHHHHHCCCC
T ss_pred HHHhh--c-cCCeEEEeCHHHHHHHHhcCCCeeEEe--cccEEEC-----CEEEEEeccccCCccccccccccccccccE
Confidence 44333 2 37899998 44455888776 456665 5788996 89999999986531 10 02479
Q ss_pred EEEEEecCCceeEEEcCCCCCccccccc---cCCcEEEeccCCCcCCCc---cccCCHHHHHHHHHHcCCCEEEEeeccc
Q 021237 220 GYLVNSSQGQLTLYYEPHCVYNQNFLEK---ERSDIIITPVIKQLLPKF---TLVSGQEDAVKLAKLLHAKFIVPMKNGD 293 (315)
Q Consensus 220 g~~i~~~~~~~~i~~sGDt~~~~~~~~~---~~~Dl~i~~~~g~~~p~~---~~h~~~eea~~~~~~l~~k~~ip~H~g~ 293 (315)
||+|+.++ +.+|||+|||+|.+++.++ .++|++++|+ |.|.+.+ ..||+++||+++++++++++++|+||++
T Consensus 152 g~~i~~~~-~~~i~~~GDt~~~~~~~~~~~~~~~Dv~il~~-g~~~~~~~~~~~hm~~~ea~~~~~~l~~~~vi~~H~~~ 229 (264)
T 3rpc_A 152 GVIFEAAD-EPTVYLVGDTVWTSDVEKALLRFDPNVIIMNT-GYAQILGFEDSIIMGTKDIGRMVVRKPEAKIIAVHMDT 229 (264)
T ss_dssp EEEEECTT-SCCEEECCSCCSCHHHHHHHHHHCCSEEEEEC-SCBCBTTCSSCSSCCHHHHHHHHHHCTTSEEEEESCSS
T ss_pred EEEEEeCC-ccEEEEECCcCchHHHHHHHHHhCCCEEEEec-CccccccccCCcccCHHHHHHHHHhCCcCeEEEEcccc
Confidence 99999852 2599999999999988765 3789999998 7776633 4699999999999999999999999999
Q ss_pred cccc----chhHHHHhhcCcccc
Q 021237 294 LDSK----GFLASIIQSEGTVES 312 (315)
Q Consensus 294 f~~~----~~~~~~~~~~g~~~~ 312 (315)
|... +.+...++..|..++
T Consensus 230 ~~~~~~~~~~l~~~~~~~g~~~~ 252 (264)
T 3rpc_A 230 VNHTATSRKDVRKFIKGNNIESH 252 (264)
T ss_dssp STTBCSCHHHHHHHHHHTTCTTT
T ss_pred ccccccCHHHHHHHHHHcCCCCc
Confidence 8763 456666676664333
No 2
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=100.00 E-value=5.5e-32 Score=241.60 Aligned_cols=196 Identities=21% Similarity=0.369 Sum_probs=158.1
Q ss_pred CCCceEEEEEeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHH
Q 021237 75 ATDVFKLTYLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKP 154 (315)
Q Consensus 75 ~~~~~~itwlGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~ 154 (315)
+.++|+|||+|||||+|+.++.+|||||+++.. ..++++++|+|||||.|+||++..+++.
T Consensus 26 ~~~~~~it~lg~s~~li~~~~~~iliDpg~~~~-------------------~~~~~~~id~VliTH~H~DH~~~~~l~~ 86 (235)
T 3kl7_A 26 SGKELTITFIKHGSLMLTYDNHSIQVDPVSEYA-------------------DYTTFPKADIILITHEHGDHLDPKAIQA 86 (235)
T ss_dssp TSCEEEEEEEETTEEEEEETTEEEEESCCTTTC-------------------CTTSSCCCSEEEECCSSTTTCCHHHHHH
T ss_pred CCCCeEEEEEcceEEEEEECCEEEEECCCCCcc-------------------chhhCCCCCEEEECCCccccCCHHHHHH
Confidence 467899999999999999999999999954320 1234568999999999999998778877
Q ss_pred hhhhCCCceEEEcCChHHHHhhcCCceEEeCCCc-eEEecccCCCcEEEEEeecCCcCCC-----CCCCccEEEEEecCC
Q 021237 155 LSKMSPNLKVIATPNAKTLLDPLFQNVTYVEPGQ-SSEIEGRNGSKLRVKATAGPVLGPP-----WQRPENGYLVNSSQG 228 (315)
Q Consensus 155 l~~~~p~~~v~~~p~~~~~l~~~~~~i~~l~~~~-~~~l~~~~g~~l~i~~~p~~~~g~~-----~~~~~~g~~i~~~~~ 228 (315)
+.+ +++++|+++...+.++ ++.++++|+ +++++ +++|+++|+.|+... ....++||+|+.++
T Consensus 87 ~~~--~~~~v~~~~~~~~~l~----~~~~l~~g~~~~~~g-----~~~i~~~p~~H~~~~~~~~~~~~~~~g~~i~~~g- 154 (235)
T 3kl7_A 87 VEK--SDTEIIANENSQKKLG----KGKVLKNGDTDTSIS-----YMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDG- 154 (235)
T ss_dssp HCC--TTCEEEECHHHHHHHT----CSEECCTTCEECCST-----TCEEEEEECCCCSTTGGGTSCTTTSEEEEEEETT-
T ss_pred hhc--CCCEEEEcHHHHHHhc----CcEEecCCCEEEEEC-----CEEEEEEEeecCCCccccccCCCCceEEEEEeCC-
Confidence 753 4789998877766665 468899999 89986 899999999764310 11136899999854
Q ss_pred ceeEEEcCCCCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHcCCCEEEEeecccccccchhHHHHhhcC
Q 021237 229 QLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEG 308 (315)
Q Consensus 229 ~~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l~~k~~ip~H~g~f~~~~~~~~~~~~~g 308 (315)
.+|||+|||++.+.+.+++++|++++|+++ ..||++++|+++++++++++++|+||++ .....+.+.++++|
T Consensus 155 -~~i~~~GDt~~~~~~~~l~~~Dv~il~~~~------~~h~~~~ea~~~~~~l~~k~vip~H~~~-~~~~~~~~~l~~~g 226 (235)
T 3kl7_A 155 -LRVYIAGDTEDIPEMKDLKDIDIAFLPVNQ------PYTMTVSQAAKAARMFSPKILYPYHYGD-TKIGELKDALKDSG 226 (235)
T ss_dssp -EEEEECCSCCSCGGGGGCCSCSEEEEECCT------TTSCCHHHHHHHHHHHCCSEEEEESCTT-CCTTHHHHHTTTSC
T ss_pred -eEEEEECCCCchhhHHhhcCCCEEEECCCC------CcccCHHHHHHHHHHcCCCEEEEEcCCC-CCHHHHHHHHhhCC
Confidence 699999999999988878899999999833 3489999999999999999999999999 44555666667666
Q ss_pred c
Q 021237 309 T 309 (315)
Q Consensus 309 ~ 309 (315)
.
T Consensus 227 i 227 (235)
T 3kl7_A 227 I 227 (235)
T ss_dssp C
T ss_pred C
Confidence 4
No 3
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=99.97 E-value=2.9e-29 Score=237.24 Aligned_cols=214 Identities=17% Similarity=0.231 Sum_probs=159.5
Q ss_pred ccCCCceEEEEEeCeEEEEEeC-CcEEEEccccCCCCCC--CCCcc--------ccCCc------cccC-CCCCCCCCCC
Q 021237 73 AVATDVFKLTYLEGNSWLWDLD-GVKVLVDPILVGNLDF--GIPWL--------FDAGK------KFLK-SFQLSDLPQV 134 (315)
Q Consensus 73 ~~~~~~~~itwlGhss~lI~~~-g~~ILiDP~~~g~~s~--p~~~~--------~~~~~------~~~~-~~~~~~lp~i 134 (315)
.++++.|+|+|+||||++|+.+ |.+|||||+++ .... +.+.+ ..|.+ +..+ .+..+++++|
T Consensus 32 ~~~~~~~~it~lG~s~~lI~~~~g~~iLiDP~~G-~g~~~~~~~~~~~~~ql~~~~G~~~l~~~~~~~p~~l~~~~l~~i 110 (360)
T 2wyl_A 32 QVAPGTFAMWWLGCTGIWLKSEGGTNVCVDFWCG-TGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQI 110 (360)
T ss_dssp CCCTTCEEEEEEETTEEEEECTTCCEEEESCCCC-CCCCCCCC----------------CCCCCCBCSCCCCCGGGCCCC
T ss_pred cCCCCcEEEEEecccEEEEEeCCCCEEEEeecCC-CCcccccccccccchhhhhhcCccccCCCcccCCCccCHHHcCCC
Confidence 4567889999999999999995 99999999663 3220 00000 00101 1111 2444457789
Q ss_pred CEEEEcCCCCCCCChhcHHHhhhhCC-CceEEEcCChHHHHhhcCC---ceEEeCCCceEEecccCCCcEEEEEeecCCc
Q 021237 135 DCLLITQSLDDHCHLKTLKPLSKMSP-NLKVIATPNAKTLLDPLFQ---NVTYVEPGQSSEIEGRNGSKLRVKATAGPVL 210 (315)
Q Consensus 135 D~VlISH~H~DHld~~tl~~l~~~~p-~~~v~~~p~~~~~l~~~~~---~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~ 210 (315)
|+|||||.|+||++..++..+.++++ ++++|+++...+.+++++. +++++++|++++++ +++|+++|+.|+
T Consensus 111 d~VliTH~H~DHig~~~l~~l~~~~~~~~~v~~p~~~~~~l~~~g~~~~~~~~l~~g~~~~~g-----~~~v~~~~~~H~ 185 (360)
T 2wyl_A 111 DAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVK-----DIEIHALDAFDR 185 (360)
T ss_dssp SEEECSBSCTTTCCHHHHHHHHHHSCTTCCEEECHHHHHHHHHHTCCGGGEEECCTTCEEEET-----TEEEEEEECCCC
T ss_pred CEEEECCCchhcCCHHHHHHHHhcCCCCCEEEEcHHHHHHHHHcCCChheEEEcCCCCEEEEC-----CEEEEEEeccCc
Confidence 99999999999998768888877654 6889887666667777653 78999999999996 799999999653
Q ss_pred C-------------CC---CCCCccEEEEEecCCceeEEEcCCCCCccccccc---cCCcEEEeccCCCcCC-CccccCC
Q 021237 211 G-------------PP---WQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEK---ERSDIIITPVIKQLLP-KFTLVSG 270 (315)
Q Consensus 211 g-------------~~---~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~---~~~Dl~i~~~~g~~~p-~~~~h~~ 270 (315)
. +. ....++||+|+.++ .+|||+||+++...+.++ .++|++++++ |. .+ +...||+
T Consensus 186 ~~~~~~~~~~h~~g~~~~~~~~~~~g~~i~~~g--~~i~~sGDt~~~~~~~~i~~~~~~Dv~il~~-g~-~~~~~~~h~~ 261 (360)
T 2wyl_A 186 TALITLPADQKAAGVLPDGMDDRAVNYLFKTPG--GSLYHSGDSHYSNYYAKHGNEHQIDVALGSY-GE-NPRGITDKMT 261 (360)
T ss_dssp ------------------CCTTTBEEEEEEETT--EEEEECTTCCCCTTHHHHHHHSCCCEEEEEB-CC-CCTTCCCSBC
T ss_pred ccccccccccccccccccccCcccEEEEEEECC--cEEEEeCCCCcCHHHHHHhhCCCCCEEEecC-CC-CcccccCCCC
Confidence 1 10 01247899999854 699999999998877654 3899999998 53 33 3345999
Q ss_pred HHHHHHHHHHcCCCEEEEeecccccc
Q 021237 271 QEDAVKLAKLLHAKFIVPMKNGDLDS 296 (315)
Q Consensus 271 ~eea~~~~~~l~~k~~ip~H~g~f~~ 296 (315)
+++|+++++++++++++|+|++++..
T Consensus 262 ~~ea~~~~~~l~~k~vi~~H~~~~~~ 287 (360)
T 2wyl_A 262 SADMLRMGEALNAKVVIPFHHDIWSN 287 (360)
T ss_dssp HHHHHHHHHHHTCSEEEEESTTTBGG
T ss_pred HHHHHHHHHHhCCCEEEEEeeccccc
Confidence 99999999999999999999999854
No 4
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=99.97 E-value=4e-29 Score=238.00 Aligned_cols=214 Identities=13% Similarity=0.158 Sum_probs=160.5
Q ss_pred ccCCCceEEEEEeCeEEEEEeC-CcEEEEccccCCCCCC--CCCccc--------cCCcc------ccC-CCCCCCCCCC
Q 021237 73 AVATDVFKLTYLEGNSWLWDLD-GVKVLVDPILVGNLDF--GIPWLF--------DAGKK------FLK-SFQLSDLPQV 134 (315)
Q Consensus 73 ~~~~~~~~itwlGhss~lI~~~-g~~ILiDP~~~g~~s~--p~~~~~--------~~~~~------~~~-~~~~~~lp~i 134 (315)
.++++.|+++|+||||++|+.+ |.+|||||+. |.++. +.+.+. .|.++ ..+ .+..+++++|
T Consensus 56 ~~~~~~~~it~lG~s~~lI~~~~g~~iLiDP~~-G~g~~~~~~~~~~~~~q~~~~~G~~~l~p~~~~~p~~l~~~~~~~i 134 (379)
T 3bv6_A 56 VVEPNTFSMWWLGCTGIWLKSAGNTNLSIDFWC-GTGKKTQKNRLMNTQHQMMRMGGVEALQPNLRTSIFPLDPFAIKEI 134 (379)
T ss_dssp CCCTTCEEEEEEETTEEEEEETTCCEEEESCCC-CCCCCCSSCCBCCTTCHHHHHHCCCBCCCCCBCSCCCSCGGGCCCC
T ss_pred cCCCCceEEEEecccEEEEEeCCCCEEEEccCC-CCCccccccccccccchhheecCccccCccccCCCCccChHHCCCC
Confidence 4567889999999999999996 9999999965 33321 001110 01111 111 2444457789
Q ss_pred CEEEEcCCCCCCCChhcHHHhhhhCC-CceEEEcCChHHHHhhcCC---ceEEeCCCceEEecccCCCcEEEEEeecCCc
Q 021237 135 DCLLITQSLDDHCHLKTLKPLSKMSP-NLKVIATPNAKTLLDPLFQ---NVTYVEPGQSSEIEGRNGSKLRVKATAGPVL 210 (315)
Q Consensus 135 D~VlISH~H~DHld~~tl~~l~~~~p-~~~v~~~p~~~~~l~~~~~---~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~ 210 (315)
|+|||||.|+||++..++..+.++++ +++||+++...+.+++++. +++++++|++++++ +++|+++|+.|+
T Consensus 135 D~IliTH~H~DHig~~~l~~l~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~l~~g~~~~~g-----~~~v~~~~~~H~ 209 (379)
T 3bv6_A 135 DAVLASHDHADHIDVNVAAAVLQNCGEHVKFIGPQACVDLWLGWGVPQERCIVAKVGDVLEIG-----DVKIRVLDSFDR 209 (379)
T ss_dssp SEEECSBCSGGGCCHHHHHHHHHHSCTTCEEEECHHHHHHHHHHTCCGGGEEECCTTCEEEET-----TEEEEEEECCCH
T ss_pred CEEEECCCCcccCChHHHHHHHhcCCCCcEEEecHHHHHHHHHcCCChhhEEEeCCCCEEEEC-----CEEEEEEecccc
Confidence 99999999999998768888877664 7889887666667776642 78999999999996 899999999653
Q ss_pred C------------CC--C---CCCccEEEEEecCCceeEEEcCCCCCcccccccc---CCcEEEeccCCCcCC-CccccC
Q 021237 211 G------------PP--W---QRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKE---RSDIIITPVIKQLLP-KFTLVS 269 (315)
Q Consensus 211 g------------~~--~---~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~---~~Dl~i~~~~g~~~p-~~~~h~ 269 (315)
. ++ . ...++||+|+.++ .+|||+||+++...+.++. ++|++++++ |. .+ +...||
T Consensus 210 ~~~~~~p~~h~~~~G~~~~~~~~~~~g~~i~~~g--~~i~~sGDt~~~~~~~~i~~~~~~Dv~il~~-g~-~~~~~~~h~ 285 (379)
T 3bv6_A 210 TALVTLPKGVSSYDKAILDGMDERAVNYLIETSG--GSVYHSGDSHYSNYYAKHGNDYQIDVALLSY-GE-NPRGVTDKM 285 (379)
T ss_dssp HHHTCCCTTSCSSCGGGGGCHHHHBEEEEEEETT--EEEEECTTCCCCTTHHHHHHHSCCSEEEEEB-CC-CCTTCCCSB
T ss_pred cccccccccccccccccccccCCceEEEEEEeCC--eEEEEeCCCCccHHHHHHhhcCCCCEEEecC-CC-CcccccccC
Confidence 1 00 0 0137899998854 6999999999988776543 899999998 43 34 334599
Q ss_pred CHHHHHHHHHHcCCCEEEEeecccccc
Q 021237 270 GQEDAVKLAKLLHAKFIVPMKNGDLDS 296 (315)
Q Consensus 270 ~~eea~~~~~~l~~k~~ip~H~g~f~~ 296 (315)
++++|+++++++++++++|+|++++..
T Consensus 286 ~~~ea~~~~~~l~~k~vi~~H~~~~~~ 312 (379)
T 3bv6_A 286 TSSDVLRAAESLDCQVVVPFHHDIWAN 312 (379)
T ss_dssp CHHHHHHHHHHHTCSEEEEESTTSBGG
T ss_pred CHHHHHHHHHHcCCCEEEEEeeccccc
Confidence 999999999999999999999999854
No 5
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.90 E-value=5.8e-23 Score=181.35 Aligned_cols=175 Identities=15% Similarity=0.193 Sum_probs=121.6
Q ss_pred CceEEEEEeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhh
Q 021237 77 DVFKLTYLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLS 156 (315)
Q Consensus 77 ~~~~itwlGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~ 156 (315)
.-|..+|+|++|++|+.+|.+|||||+.+. .. +.. +.+++|+|||||.|+||++. ..+.
T Consensus 11 ~~~~~~~~~~~~~li~~~~~~iLiD~g~~~-~~----------------~~~-~~~~id~VliTH~H~DH~~~---~~l~ 69 (220)
T 1vjn_A 11 HHMKITWFGHACFALEMEGKTIVTDPFDES-VG----------------YPI-PNVTADVVTESHQHFDHNAH---HLVK 69 (220)
T ss_dssp -CEEEEEEETTEEEEEETTEEEEESCCC----------------------CC-CCCBCSEEECSSCC---CGG---GGCB
T ss_pred cceeeEEccCCEEEEEECCEEEEEcCCCCc-CC----------------CCc-CCCCcCEEEECCCCCCCCCc---hHhc
Confidence 358899999999999999999999995531 10 111 23589999999999999753 3333
Q ss_pred hhCCCceEEEcCChHHHHhhcCCceEEeCCCceEEecccCCCcEEEEEeecCCcCC-CC-CCCccEEEEEecCCceeEEE
Q 021237 157 KMSPNLKVIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGP-PW-QRPENGYLVNSSQGQLTLYY 234 (315)
Q Consensus 157 ~~~p~~~v~~~p~~~~~l~~~~~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~-~~-~~~~~g~~i~~~~~~~~i~~ 234 (315)
. +.+++. . +.+++++ +++|+++|+.|... +. ....+||+|+.++ .+|+|
T Consensus 70 ~---~~~vi~------------------~-~g~~~~~-----~~~I~~~~~~H~~~~g~~~g~~~g~~i~~~g--~~i~~ 120 (220)
T 1vjn_A 70 G---NFRVID------------------R-PGAYTVN-----GVKIKGVETFHDPSHGRERGKNIVFVFEGEG--IKVCH 120 (220)
T ss_dssp S---SCEEEC------------------S-SEEEEET-----TEEEEEEEEEEC-------CEEEEEEEEETT--EEEEE
T ss_pred C---CCEEEc------------------C-CCeEEEC-----CEEEEEEeeecCCCCCccCCCcEEEEEEECC--eEEEE
Confidence 1 444431 1 2256776 79999999875421 11 1125799998854 69999
Q ss_pred cCCCCCccccc---cccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHcCCCEEEEeecccccccc---hhHHHHhhc
Q 021237 235 EPHCVYNQNFL---EKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKG---FLASIIQSE 307 (315)
Q Consensus 235 sGDt~~~~~~~---~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l~~k~~ip~H~g~f~~~~---~~~~~~~~~ 307 (315)
+||+++.+.+. +..++|++++|+ |.+ .||++++|+++++++++++++|+||+.+.+.. ..+.+++..
T Consensus 121 ~GDt~~~~~~~~~~~~~~~Dvlil~~-g~~-----~h~~~~~a~~~~~~~~~k~vi~~H~~~~~~~~~~~~~~~~~~~~ 193 (220)
T 1vjn_A 121 LGDLGHVLTPAQVEEIGEIDVLLVPV-GGT-----YTIGPKEAKEVADLLNAKVIIPMHYKTKYLKFNLLPVDDFLKLF 193 (220)
T ss_dssp CTTCCSCCCHHHHHHHCCCSEEEEEC-CSS-----SSCCHHHHHHHHHHTTCSEEEEESCCCSSCCTTCCCTHHHHTTS
T ss_pred eCCCCCcchHHHHHhhCCCCEEEEcC-CCc-----CcCCHHHHHHHHHhcCCCEEEEEecccccccCCchhHHHHHHHH
Confidence 99999987532 235899999998 432 48999999999999999999999999986542 255555443
No 6
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.90 E-value=2.7e-22 Score=181.22 Aligned_cols=191 Identities=14% Similarity=0.199 Sum_probs=144.1
Q ss_pred CCCceEEEEEe-----------CeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCC
Q 021237 75 ATDVFKLTYLE-----------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSL 143 (315)
Q Consensus 75 ~~~~~~itwlG-----------hss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H 143 (315)
....|+|+++| ++|++|+.++.+||||| |.... .++... .+..+||+|+|||.|
T Consensus 21 ~~~~m~i~~LG~g~~~p~~~~~~~~~li~~~~~~iLiD~---G~~~~----------~~l~~~--~~~~~i~~v~iTH~H 85 (268)
T 1zkp_A 21 QSNAMKMTVVGFWGGFPEAGEATSGYLFEHDGFRLLVDC---GSGVL----------AQLQKY--ITPSDIDAVVLSHYH 85 (268)
T ss_dssp CSSCEEEEEEECBSSSCCTTCCBSEEEEEETTEEEEECC---CTTHH----------HHHTTT--CCGGGCCEEECSCCC
T ss_pred CCCCcEEEEEeCCCCcCCCCCCccEEEEEECCcEEEEEC---CHHHH----------HHHHHh--CCcccCCEEEEecCC
Confidence 34569999999 89999999999999999 43210 111111 123479999999999
Q ss_pred CCCCChhcHHHhhhh----------CCCceEEEcCChHHHHhhcC----CceEEeCCCceEEecccCCCcEEEEEeecCC
Q 021237 144 DDHCHLKTLKPLSKM----------SPNLKVIATPNAKTLLDPLF----QNVTYVEPGQSSEIEGRNGSKLRVKATAGPV 209 (315)
Q Consensus 144 ~DHld~~tl~~l~~~----------~p~~~v~~~p~~~~~l~~~~----~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~ 209 (315)
+|| ++++..|.+. .+++++|+++...+.+++.. .++.++++++.++++ +++|+++++.|
T Consensus 86 ~DH--~~gl~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~g-----~~~v~~~~~~H 158 (268)
T 1zkp_A 86 HDH--VADIGVLQYARLITSATKGQLPELPIYGHTFDENGFHSLTHEPHTKGIPYNPEETLQIG-----PFSISFLKTVH 158 (268)
T ss_dssp HHH--HTTHHHHHHHHHHHHHHHCCCCCEEEEECSSSHHHHHTTCBTTTEEEEECCTTSCEEET-----TEEEEEEECCS
T ss_pred chh--hCCHHHHHHHHHhcccccCCCCceEEEeCccHHHHHHhcccCCccceEEecCCCeEEEC-----CEEEEEEECCC
Confidence 999 5666655432 24688999888777776542 457789999999996 89999998864
Q ss_pred cCCCCCCCccEEEEEecCCceeEEEcCCCCCccccccc-cCCcEEEeccCCCcCCC---ccccCCHHHHHHHHHHcCCCE
Q 021237 210 LGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEK-ERSDIIITPVIKQLLPK---FTLVSGQEDAVKLAKLLHAKF 285 (315)
Q Consensus 210 ~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~-~~~Dl~i~~~~g~~~p~---~~~h~~~eea~~~~~~l~~k~ 285 (315)
.. ...+|+++.++ .+++|+||+.+.+.+.+. .++|++++++ ..+... ...|+++++++++++++++++
T Consensus 159 ~~-----~~~~~~i~~~~--~~i~~~GD~~~~~~~~~~~~~~d~li~e~-~~~~~~~~~~~~H~~~~~a~~~~~~~~~~~ 230 (268)
T 1zkp_A 159 PV-----TCFAMRITAGN--DIVVYSADSSYIPEFIPFTKDADLFICEC-NMYAHQEAAKAGHMNSTEVASIAKDANVKE 230 (268)
T ss_dssp SS-----CCEEEEEEETT--EEEEECCSCCCCTTHHHHHTTCSEEEEEC-CBCTTSCCGGGTCCBHHHHHHHHHHTTCSE
T ss_pred CC-----CceEEEEEECC--eEEEEeCCCCCCHHHHHHHcCCCEEEEEC-CCCccccccCCCCCCHHHHHHHHHHcCCCE
Confidence 31 26799998753 699999999998877664 4899999997 322221 123999999999999999999
Q ss_pred EEEeeccccc
Q 021237 286 IVPMKNGDLD 295 (315)
Q Consensus 286 ~ip~H~g~f~ 295 (315)
++++|++...
T Consensus 231 lil~H~~~~~ 240 (268)
T 1zkp_A 231 LLLTHLPHTG 240 (268)
T ss_dssp EEEESBCSSS
T ss_pred EEEECCCCCC
Confidence 9999999853
No 7
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=99.87 E-value=1e-21 Score=186.07 Aligned_cols=195 Identities=18% Similarity=0.131 Sum_probs=133.9
Q ss_pred eEEEEEe-----------CeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCC
Q 021237 79 FKLTYLE-----------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHC 147 (315)
Q Consensus 79 ~~itwlG-----------hss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHl 147 (315)
|+|++|| +||++|+.+|.++|||| |.... . .+ .+ ..+.. .+||+|||||.|+||+
T Consensus 1 M~l~~LGtg~~~p~~~r~~ss~ll~~~~~~iLiD~---G~g~~-~-~l----~~--~~~~~---~~id~I~iTH~H~DHi 66 (368)
T 3zwf_A 1 MDVTFLGTGAAYPSPTRGASAVVLRCEGECWLFDC---GEGTQ-T-QL----MK--SQLKA---GRITKIFITHLHGDHF 66 (368)
T ss_dssp CEEEEEECBSSSCCSSSCSSEEEEEETTEEEEECC---CTTHH-H-HH----HH--SSSCG---GGEEEEECCCSSGGGT
T ss_pred CEEEEECCCCCCCCCCCCccEEEEEECCeEEEEeC---ChhHH-H-HH----HH--cCCCh---HHCCEEEECCCChHHh
Confidence 6789998 89999999999999999 54321 0 00 00 02222 3789999999999995
Q ss_pred ChhcHHHhhhh----------CCCceEEEcCChHHHHhhc---------C-CceEEeCCC--------------------
Q 021237 148 HLKTLKPLSKM----------SPNLKVIATPNAKTLLDPL---------F-QNVTYVEPG-------------------- 187 (315)
Q Consensus 148 d~~tl~~l~~~----------~p~~~v~~~p~~~~~l~~~---------~-~~i~~l~~~-------------------- 187 (315)
.++..|... .+.++||+++...++++.. + ..++++++.
T Consensus 67 --~gl~~l~~~~~~~~~~~~~~~~l~iygp~~~~~~l~~~l~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~ 144 (368)
T 3zwf_A 67 --FGLPGLLCTISLQSGSMVSKQPIEIYGPVGLRDFIWRTMELSHTELVFHYVVHELVPTADQCPAEELKEFAHVNRADS 144 (368)
T ss_dssp --TTHHHHHHHHHHHC------CCEEEEEETTHHHHHHHHHHHTTCCCSSCEEEEEECCCGGGSCC--------------
T ss_pred --CcHHHHHHHhhhccccccCCCCeEEEEcHHHHHHHHHHHHhhCcCCCceEEEEEeecCcccccccccccccccccccc
Confidence 555544321 1267898888776666541 1 256777652
Q ss_pred -------ceEEecc-------cCCCcEEEEEeecCCcCCCCCCCccEEEEEecC--------------------------
Q 021237 188 -------QSSEIEG-------RNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQ-------------------------- 227 (315)
Q Consensus 188 -------~~~~l~~-------~~g~~l~i~~~p~~~~g~~~~~~~~g~~i~~~~-------------------------- 227 (315)
+.+.++. ...++++|+++|..|.. .++||+|+.+.
T Consensus 145 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~V~a~~~~H~v-----p~~gy~i~e~~~~g~~~~ek~~~~gip~G~~~~~Lk~ 219 (368)
T 3zwf_A 145 PPKEEQGRTILLDSEENSYLLFDDEQFVVKAFRLFHRI-----PSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKLKN 219 (368)
T ss_dssp -----CCCEECCBTTTTBEEEEECSSEEEEEEEEESSS-----CEEEEEEEECC--------------------------
T ss_pred CcccccccccccccccCceeEEeCCCEEEEEEeccCCC-----ceEEEEEEecCCcCccCHHHHHHcCCCchHHHHhcCC
Confidence 2221100 00248999999997643 37899997641
Q ss_pred ----------------------CceeEEEcCCCCC--ccccccc-cCCcEEEeccCCCcCCCc------cccCCHHHHHH
Q 021237 228 ----------------------GQLTLYYEPHCVY--NQNFLEK-ERSDIIITPVIKQLLPKF------TLVSGQEDAVK 276 (315)
Q Consensus 228 ----------------------~~~~i~~sGDt~~--~~~~~~~-~~~Dl~i~~~~g~~~p~~------~~h~~~eea~~ 276 (315)
++.+|+|+|||++ ...+.+. .++|++++++ .|.... ..||+++||++
T Consensus 220 G~~v~~~dG~~i~~~~v~~~~~~g~~v~~~GDT~~~~~~~~~~~~~~~Dlli~Ea--t~~~~~~~~a~~~~H~t~~~A~~ 297 (368)
T 3zwf_A 220 GISVVLENGVTISPQDVLKKPIVGRKICILGDCSGVVGDGGVKLCFEADLLIHEA--TLDDAQMDKAKEHGHSTPQMAAT 297 (368)
T ss_dssp ----------------------CCCEEEEECSCSEECSSHHHHHTTTCSEEEEEC--CSCGGGHHHHHHTTCCCHHHHHH
T ss_pred CCeEEecCCEEEEhHHhccccccceEEEEEecCCcccchhHHHHhcCCCEEEEec--CCChHHHhhhhcCCCCCHHHHHH
Confidence 1569999999998 5544444 4899999996 344311 24999999999
Q ss_pred HHHHcCCCEEEEeecccccc
Q 021237 277 LAKLLHAKFIVPMKNGDLDS 296 (315)
Q Consensus 277 ~~~~l~~k~~ip~H~g~f~~ 296 (315)
++++++++.++++|++..-.
T Consensus 298 ~a~~~~~k~lil~H~s~ry~ 317 (368)
T 3zwf_A 298 FAKLCRAKRLVLTHFSQRYK 317 (368)
T ss_dssp HHHHTTCSEEEEECBCCCC-
T ss_pred HHHHcCCCEEEEEeeCcccC
Confidence 99999999999999997643
No 8
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.86 E-value=7.7e-21 Score=175.94 Aligned_cols=188 Identities=18% Similarity=0.142 Sum_probs=136.4
Q ss_pred eEEEEEe-----------CeEEEEEe---CCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCC
Q 021237 79 FKLTYLE-----------GNSWLWDL---DGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLD 144 (315)
Q Consensus 79 ~~itwlG-----------hss~lI~~---~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~ 144 (315)
|+|++|| +||++|+. ++.+||||| |... . +++..... ++.+||+|||||.|+
T Consensus 1 M~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~iLiD~---G~~~-~---------~~l~~~~~-~~~~i~~I~iTH~H~ 66 (320)
T 1y44_A 1 MELLFLGTGAGIPAKARNVTSVALKLLEERRSVWLFDC---GEAT-Q---------HQMLHTTI-KPRKIEKIFITHMHG 66 (320)
T ss_dssp CEEEEEECBSSSCCSSCCBCEEEEEETTTTSEEEEECC---CTTH-H---------HHHTTSSC-CGGGEEEEECSBCCG
T ss_pred CEEEEEecCCCCCCccCCCCEEEEEEecCCCcEEEEEC---CHHH-H---------HHHHHcCC-CHHHcCEEEEeCCCh
Confidence 5778887 79999999 899999999 4322 0 11111111 234789999999999
Q ss_pred CCCChhcHHHhhh------hCCCceEEEcCChHHHHhhc----------CCceEEeCCCceEEecccCCCcEEEEEeecC
Q 021237 145 DHCHLKTLKPLSK------MSPNLKVIATPNAKTLLDPL----------FQNVTYVEPGQSSEIEGRNGSKLRVKATAGP 208 (315)
Q Consensus 145 DHld~~tl~~l~~------~~p~~~v~~~p~~~~~l~~~----------~~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~ 208 (315)
||+ +++..|.. +.++++||+++.....++.. ..++.++++++.++++ +++|+++|..
T Consensus 67 DH~--~gl~~l~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~~v~~~p~~ 139 (320)
T 1y44_A 67 DHV--YGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETSLAVTKTHLTYPLAIQEIEEGIVFEDD-----QFIVTAVSVI 139 (320)
T ss_dssp GGT--TTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTTCCCSSCEEEEECCSEEEEECS-----SEEEEEEECB
T ss_pred hhh--CCHHHHHHHHHhcCCCCCEEEEeCHHHHHHHHHHHHhhccCCCCceEEEEcCCCceEecC-----CEEEEEEEcc
Confidence 995 55555433 12367899988776666532 1257789999888885 7999999976
Q ss_pred CcCCCCCCCccEEEEEec------------------------------------------------CCceeEEEcCCCCC
Q 021237 209 VLGPPWQRPENGYLVNSS------------------------------------------------QGQLTLYYEPHCVY 240 (315)
Q Consensus 209 ~~g~~~~~~~~g~~i~~~------------------------------------------------~~~~~i~~sGDt~~ 240 (315)
|.. ...||.++.. .++.+|+|+||+++
T Consensus 140 H~~-----~~~gy~i~~~~~~~~~~~~~~~~~g~~~g~~~~~l~~g~~v~~~~G~i~~~~~~~~~~~~g~~i~~sgDt~~ 214 (320)
T 1y44_A 140 HGV-----EAFGYRVQEKDVPGSLKADVLKEMNIPPGPVYQKIKKGETVTLEDGRIINGNDFLEPPKKGRSVVFSGDTRV 214 (320)
T ss_dssp SSS-----SBEEEEEEECCBCCCC--------------------------------------CCCCBCCCEEEECCSCBC
T ss_pred CCC-----CcceEEEecCCCcCccCHHHHHHcCCCCchhHHHhhCCCeEEcCCCeEEcHHHhcccCCCCCEEEEeCCCCC
Confidence 532 2457777631 02469999999999
Q ss_pred ccccccc-cCCcEEEeccCCCcCCC------ccccCCHHHHHHHHHHcCCCEEEEeecccc
Q 021237 241 NQNFLEK-ERSDIIITPVIKQLLPK------FTLVSGQEDAVKLAKLLHAKFIVPMKNGDL 294 (315)
Q Consensus 241 ~~~~~~~-~~~Dl~i~~~~g~~~p~------~~~h~~~eea~~~~~~l~~k~~ip~H~g~f 294 (315)
.+.+.+. .++|++++++ .|... ...|+++++|+++++++++++++++|++.-
T Consensus 215 ~~~~~~~~~~~D~li~E~--t~~~~~~~~a~~~~H~t~~~a~~~a~~~~~~~lil~H~s~~ 273 (320)
T 1y44_A 215 SDKLKELARDCDVMVHEA--TFAKEDRKLAYDYYHSTTEQAAVTAKEARAKQLILTHISAR 273 (320)
T ss_dssp CHHHHHHTTTCSEEEEEC--CBCTTCHHHHHHTTCCBHHHHHHHHHHHTCSEEEEECBCTT
T ss_pred HHHHHHHhCCCCEEEEec--cCCcchHhHHhhcCCCCHHHHHHHHHHcCCCEEEEEeEcCC
Confidence 9877655 3899999996 34432 134999999999999999999999999983
No 9
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.86 E-value=4e-21 Score=176.52 Aligned_cols=189 Identities=15% Similarity=0.082 Sum_probs=138.9
Q ss_pred eEEEEEe-----------CeEEEEEe----CCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCC
Q 021237 79 FKLTYLE-----------GNSWLWDL----DGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSL 143 (315)
Q Consensus 79 ~~itwlG-----------hss~lI~~----~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H 143 (315)
|+|+++| +||++|+. ++.+||||| |.... +++..... ++.+||+|+|||.|
T Consensus 2 m~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~~iliD~---G~~~~----------~~l~~~~~-~~~~i~~i~iTH~H 67 (306)
T 2cbn_A 2 MNLIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDC---GEGTQ----------HQLLHTAF-NPGKLDKIFISHLH 67 (306)
T ss_dssp CEEEEEECBSSSCCSSCCBCEEEEECCCSSCCCEEEECC---CTTHH----------HHHHTSCC-CTTTEEEEECSCCC
T ss_pred eEEEEEEcCCCCCCCCCCCCEEEEEeecCCCCcEEEEEC---CHHHH----------HHHHHhCC-CHHHcCEEEEecCC
Confidence 6788887 69999998 889999999 43220 11111111 23478999999999
Q ss_pred CCCCChhcHHHhhh------hCCCceEEEcCChHHHHhhc---C-------CceEEeCCCceEEecccCCCcEEEEEeec
Q 021237 144 DDHCHLKTLKPLSK------MSPNLKVIATPNAKTLLDPL---F-------QNVTYVEPGQSSEIEGRNGSKLRVKATAG 207 (315)
Q Consensus 144 ~DHld~~tl~~l~~------~~p~~~v~~~p~~~~~l~~~---~-------~~i~~l~~~~~~~l~~~~g~~l~i~~~p~ 207 (315)
+|| ++++..|.. +.+++++|+++...+.++.. . .++.++++++.++++ +++|+++|.
T Consensus 68 ~DH--~~gl~~l~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~~v~~~~~ 140 (306)
T 2cbn_A 68 GDH--LFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSWTDYPLEIVEIGAGEILDDG-----LRKVTAYPL 140 (306)
T ss_dssp HHH--HTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTTCCCSSCEEEEECCSEEEEECS-----SEEEEEEEC
T ss_pred chh--hCChHHHHHHHHhcCCCCCeEEEcCccHHHHHHHHHHhhccCCCceEEEEEcCCCcEeecC-----CEEEEEEEc
Confidence 999 566655543 12367899988776665542 1 257889999888886 899999999
Q ss_pred CCcCCCCCCCccEEEEEec------------------------------------------------CCceeEEEcCCCC
Q 021237 208 PVLGPPWQRPENGYLVNSS------------------------------------------------QGQLTLYYEPHCV 239 (315)
Q Consensus 208 ~~~g~~~~~~~~g~~i~~~------------------------------------------------~~~~~i~~sGDt~ 239 (315)
.|.. ...||+++.. .++.+|+|+||++
T Consensus 141 ~H~~-----~~~gy~i~~~~~~~~~~~~~~~~~gv~~~~~~~~l~~g~~v~~~~G~~~~~~~~~~~~~~g~~i~~sgDt~ 215 (306)
T 2cbn_A 141 EHPL-----ECYGYRIEEHDAPGALNAQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTG 215 (306)
T ss_dssp BSSS-----CCEEEEEEECCCCCCBCHHHHHHTTCCSSHHHHHHHHTCCCEETTTEECCGGGTBCCCCCCCEEEECCSCB
T ss_pred cCCC-----CccEEEEEecCccCccCHHHHHHcCCCCchHHHHhcCCCeEEcCCCcEEcHHHhcCCCCCCCEEEEeCCCC
Confidence 7643 2568888741 1246899999999
Q ss_pred Cccccccc-cCCcEEEeccCCCcCCC------ccccCCHHHHHHHHHHcCCCEEEEeeccccc
Q 021237 240 YNQNFLEK-ERSDIIITPVIKQLLPK------FTLVSGQEDAVKLAKLLHAKFIVPMKNGDLD 295 (315)
Q Consensus 240 ~~~~~~~~-~~~Dl~i~~~~g~~~p~------~~~h~~~eea~~~~~~l~~k~~ip~H~g~f~ 295 (315)
+.+.+.+. .++|++++++ .|... ...|++++||+++++++++++++++|++.-.
T Consensus 216 ~~~~~~~~~~~~D~li~E~--t~~~~~~~~a~~~~H~t~~~a~~~a~~~~~~~lvl~H~s~~~ 276 (306)
T 2cbn_A 216 PCDAALDLAKGVDVMVHEA--TLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRY 276 (306)
T ss_dssp SCSTHHHHHTTCSEEEEEC--CBCGGGHHHHHHTTCCBHHHHHHHHHHHTCSEEEEECBCTTC
T ss_pred CHHHHHHHhcCCCEEEEEC--cCChhhHhHHhhcCCCCHHHHHHHHHHcCCcEEEEEeecCCC
Confidence 98877654 4899999996 34432 1249999999999999999999999999743
No 10
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.85 E-value=1.7e-20 Score=168.81 Aligned_cols=177 Identities=15% Similarity=0.168 Sum_probs=131.3
Q ss_pred EeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCC-Cc
Q 021237 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSP-NL 162 (315)
Q Consensus 84 lGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p-~~ 162 (315)
-.++|++|+.++.+||||| |... + .+ .+.. .+||+|||||.|+|| ++++..|....+ .+
T Consensus 37 r~~s~~li~~~~~~iLiD~---G~~~-----~----~~---~~~~---~~id~IliTH~H~DH--i~gl~~l~~~~~~~~ 96 (258)
T 3g1p_A 37 RQPCSGVVKFNDAITLIDA---GLHD-----L----AD---RWSP---GSFQQFLLTHYHMDH--VQGLFPLRWGVGDPI 96 (258)
T ss_dssp BCBSEEEEEETTEEEEECC---CCTT-----H----HH---HCCT---TSSCEEECSCCCHHH--HGGGTTTTTCSSSCE
T ss_pred ccCceEEEEECCcEEEEEC---CchH-----H----Hh---hcCc---ccCCEEEEccCchhH--hCCHHHHhccCCCCe
Confidence 4578999999999999999 4221 1 01 1222 378999999999999 677777754322 47
Q ss_pred eEEEcCChH---HHHhhcC-Cc-eEEeCCCceEEecccCCCcEEEEEeecCCcCCCCCCCccEEEEEecCCceeEEEcCC
Q 021237 163 KVIATPNAK---TLLDPLF-QN-VTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPH 237 (315)
Q Consensus 163 ~v~~~p~~~---~~l~~~~-~~-i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGD 237 (315)
++|+++... ..++..+ .+ ..++++++.++++ +++|+++|+.|.. ...||+++.++ .+++|+||
T Consensus 97 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~v~~~~~~H~~-----~~~g~~i~~~~--~~i~~~GD 164 (258)
T 3g1p_A 97 PVYGPPDEQGCDDLFKHPGLLDFSHTVEPFVVFDLQ-----GLQVTPLPLNHSK-----LTFGYLLETAH--SRVAWLSD 164 (258)
T ss_dssp EEEECCCSSCSTTTTTSCTTEEEEEECCTTCCEEET-----TEEEEEEECCSSS-----CCEEEEEECSS--CEEEEECS
T ss_pred EEEeChhhhhHHHHhcCCCccccccccCCCCeEEEC-----CEEEEEEECCCCC-----CceEEEEEeCC--cEEEEECC
Confidence 888887765 3343222 22 2588999999996 8999999987542 25799998754 59999999
Q ss_pred CCCccc-ccc-c--cCCcEEEeccCCCcCCC---ccccCCHHHHHHHHHHcCCCEEEEeecccc
Q 021237 238 CVYNQN-FLE-K--ERSDIIITPVIKQLLPK---FTLVSGQEDAVKLAKLLHAKFIVPMKNGDL 294 (315)
Q Consensus 238 t~~~~~-~~~-~--~~~Dl~i~~~~g~~~p~---~~~h~~~eea~~~~~~l~~k~~ip~H~g~f 294 (315)
+++.+. ..+ . .++|++++++ .|.+. ...||++++|+++++++++++++++|++.-
T Consensus 165 t~~~~~~~~~~l~~~~~Dlli~e~--t~~~~~~~~~~H~~~~~a~~~~~~~~~k~lil~H~s~~ 226 (258)
T 3g1p_A 165 TAGLPEKTLKFLRNNQPQVMVMDC--SHPPRADAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 (258)
T ss_dssp CSSCCHHHHHHHHHTCCSEEEEEC--CBSSCSSCCSSSCBHHHHHHHHHHHCCSCEEEESCCHH
T ss_pred CCCCCHHHHHHHHhCCCCEEEEeC--CCCCccccCCCCCCHHHHHHHHHHcCCCEEEEECccCc
Confidence 998765 222 2 5899999996 34432 135999999999999999999999999854
No 11
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.84 E-value=1.1e-20 Score=173.48 Aligned_cols=174 Identities=17% Similarity=0.166 Sum_probs=126.1
Q ss_pred eEEEEEe---CC--cEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhh----
Q 021237 87 NSWLWDL---DG--VKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSK---- 157 (315)
Q Consensus 87 ss~lI~~---~g--~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~---- 157 (315)
+|++|+. +| .+||||| |.... ..+.. .++.+||+|||||.|+|| +.++..|..
T Consensus 64 ~s~li~~~~~~g~~~~iLID~---G~~~~----------~~l~~---~~~~~id~IliTH~H~DH--i~Gl~~l~~~~~~ 125 (293)
T 3md7_A 64 ASLLVERYDAEGNNTVVVIDT---GPDFR----------MQMID---SGVHMLDAAVYTHPHADH--IHGIDDLRTYVVD 125 (293)
T ss_dssp CEEEEEEECTTCCEEEEEECC---CTTHH----------HHHHH---HTCCCCSEEECSCCCHHH--HTTGGGGHHHHHH
T ss_pred cEEEEEecCCCCceeEEEEEC---CccHH----------HHHHh---cCCCcccEEEEcCCCchh--hCCHHHHHHHhhc
Confidence 7899995 45 7999999 53320 11101 123589999999999999 455554432
Q ss_pred hCCCceEEEcCChHHHHhhc----C-----------CceEEeCCCceEEecccCCCc----EEEEEeecCCcCCCCCCCc
Q 021237 158 MSPNLKVIATPNAKTLLDPL----F-----------QNVTYVEPGQSSEIEGRNGSK----LRVKATAGPVLGPPWQRPE 218 (315)
Q Consensus 158 ~~p~~~v~~~p~~~~~l~~~----~-----------~~i~~l~~~~~~~l~~~~g~~----l~i~~~p~~~~g~~~~~~~ 218 (315)
+...+++|+++...+.++.. + .++.++++++.++++ + ++|++++..|+.. ..
T Consensus 126 ~~~~~~vy~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~g-----~~~~~~~v~~~~~~H~~~----~~ 196 (293)
T 3md7_A 126 NGRLMDVYANRLTRNRLYDTFGYCFETPVGSSYPPILSMHDIAPETPFSIE-----GAGGAIRFEPFSQVHGDI----ES 196 (293)
T ss_dssp HTSCEEEEECHHHHHHHHHHCGGGTSCCTTCCCCCCEEEEECCTTCCEEEC-----CTTCCEEEEEEEEEETTE----EE
T ss_pred CCCceEEEECHHHHHHHHHhhhhhhccccccCCCCceEEEEcCCCCcEEEC-----CCCCcEEEEEEEecCCCC----CE
Confidence 12478999887776665442 1 147789999999996 5 9999999865411 25
Q ss_pred cEEEEEecCCceeEEEcCCCCC-ccccccc-cCCcEEEeccCCCcCCCccccCCHHHHHHHHHHcCCCEEEEeeccccc
Q 021237 219 NGYLVNSSQGQLTLYYEPHCVY-NQNFLEK-ERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLD 295 (315)
Q Consensus 219 ~g~~i~~~~~~~~i~~sGDt~~-~~~~~~~-~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l~~k~~ip~H~g~f~ 295 (315)
.||+|+ +++|+||+++ .+.+.+. .++|++++++ ..+.+ ...|+++++|+++++++++|+++++|++...
T Consensus 197 ~g~~i~------~~~y~gDt~~~~~~~~~~~~~~Dlli~e~-~~~~~-~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~ 267 (293)
T 3md7_A 197 LGFRIG------SVVYCTDVSAFPEQSLQYIKDADVLIIGA-LQYRP-HPSHFSLGEALEWIEKLSPKRAILTHMHVPL 267 (293)
T ss_dssp EEEEET------TEEEECSCSBCCGGGHHHHTTCSEEEEEC-CCSSC-BTTBCCHHHHHHHHHHHCCSEEEEESBCTTC
T ss_pred EEEEEe------EEEEECCCCCCCHHHHHHhcCCCEEEEeC-ccCCC-CCCCCCHHHHHHHHHHcCCCEEEEECCCCCC
Confidence 678775 6999999985 4555444 4899999997 44443 2359999999999999999999999999753
No 12
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.74 E-value=1.8e-18 Score=174.70 Aligned_cols=253 Identities=14% Similarity=0.097 Sum_probs=159.5
Q ss_pred CCCCCCChhhhhhhcccccCCCcCCCceeCCCCCCCCCC-Ccc--cccCC-CCCCccccccccccccc---CCCceEEEE
Q 021237 11 PFSCLPSRRSRTRTTDIILSALSKTPRFTSACRSSVPIH-PTA--FNFPT-RRFSKVVSALVSEENAV---ATDVFKLTY 83 (315)
Q Consensus 11 ~~g~~~~~~~~~~~~~~~~s~~~~~~~f~n~~~~~~~~~-~~~--~~~~~-~~p~~~~p~~~~~~~~~---~~~~~~itw 83 (315)
.||+. +.+++++.+ +++|..+.|+.|.-+ ... ... +++.. ......++.+..+.... +.+.|++++
T Consensus 112 ~~g~~--~~~~~~i~~---~~~~~~~~~~~p~~~--~~~~~~i~~~l~~~~~~~~~~l~~i~~~i~~~~~~~~~~m~i~~ 184 (636)
T 2ycb_A 112 VIGKY--GSTSREIVK---NTGWAPKILRTPPIS--SEIIERIRRTLRKNSKERKKILQQLGNRIHQKPKYDNDWARLTA 184 (636)
T ss_dssp HHCTT--SHHHHHHHH---HHCCEEEEEECCSSC--CHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCSSCCCCCEEEE
T ss_pred ccccc--chhHHHHhh---ccCCccceeecCCcc--hhHHHHHHHHHHhhhHHHHHHHHHhhhccccccCCCCCeEEEEE
Confidence 68887 889999999 999999999954321 100 111 22211 11113344333332211 346699999
Q ss_pred Ee------CeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCC--CCCCCCCCEEEEcCCCCCCCChhcHHHh
Q 021237 84 LE------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQ--LSDLPQVDCLLITQSLDDHCHLKTLKPL 155 (315)
Q Consensus 84 lG------hss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~--~~~lp~iD~VlISH~H~DHld~~tl~~l 155 (315)
+| +||++|+.++.+|||||+++.... .. ...++.+. ..+..+||+|+|||.|+|| .+++..|
T Consensus 185 LG~~~evg~s~~lI~~~~~~ILID~G~~~~~~-----~~---~~~~~~l~~l~~~~~~Id~VlLTH~H~DH--iGglp~L 254 (636)
T 2ycb_A 185 MGGFREVGRSCLYLQTPNSRVLLDCGVNVAGG-----DD---KNSYPYLNVPEFTLDSLDAVIITHAHLDH--SGFLPYL 254 (636)
T ss_dssp EESSSSSSCCEEEEECSSCEEEEEECCCCSSC-----CH---HHHSCCTTSTTCCTTTCCEEECSSSSHHH--HTTHHHH
T ss_pred EecCCCCCCCEEEEEECCeEEEEeCCCCcccc-----cc---hhhccccccccCCcccCcEEEECCCChHH--hcCHHHH
Confidence 96 789999999999999995542110 00 01222222 1345589999999999999 6899888
Q ss_pred hhhCCCceEEEcCChHHHHhhc----------------C---------CceEEeCCCceEEecccCCCcEEEEEeecCCc
Q 021237 156 SKMSPNLKVIATPNAKTLLDPL----------------F---------QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVL 210 (315)
Q Consensus 156 ~~~~p~~~v~~~p~~~~~l~~~----------------~---------~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~ 210 (315)
.+...++++|+++...+.++.. + .++..+++++.+++. ++++|++.++.|.
T Consensus 255 ~~~~~~~~Iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~g~~~~l~----ggi~v~~~~~gH~ 330 (636)
T 2ycb_A 255 YHYGYDGPVYCTAPTRDLMTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIA----PDIRLTLHNAGHI 330 (636)
T ss_dssp HHTTCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCSCCHHHHHHHHHTEEECCTTCCEEEE----TTEEEEEEECCSS
T ss_pred HhcCCCCeEEEcchHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHhceEEeCCCCEEEec----CCeEEEEeCCCCC
Confidence 7633478999988775543210 1 146889999999993 2799988766442
Q ss_pred CCCCCCCccEEEEEecCCceeEEEcCCCCCccc--cc----cccCCcEEEeccCCCcCCCccccCC----HHHHHHHHHH
Q 021237 211 GPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQN--FL----EKERSDIIITPVIKQLLPKFTLVSG----QEDAVKLAKL 280 (315)
Q Consensus 211 g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~--~~----~~~~~Dl~i~~~~g~~~p~~~~h~~----~eea~~~~~~ 280 (315)
. ..++|.++.+++..+|+|+||+++... +. ...++|++++++ . |......|.. .++..+++++
T Consensus 331 ~-----Gs~~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~D~LI~Es-T-~~~~~~~h~s~~~~~~~l~~~i~~ 403 (636)
T 2ycb_A 331 L-----GSAMAHLHIGDGQHNMVYTGDFKYEQSRLLEAAANRFPRIETLVMES-T-YGGHEDVQPSRNRAEKELVKTIYS 403 (636)
T ss_dssp T-----TCEEEEEEETTTTTCEEECCSCCSSCCSSSCCCCCCCSCCSEEEEEC-T-TCSGGGCCCCHHHHHHHHHHHHHH
T ss_pred C-----CcEEEEEEECCCeEEEEEECCCCCCcccccCCcccCCCCCeEEEECC-C-CCCCCCCCCCHHHHHHHHHHHHHH
Confidence 1 257888887542128999999988654 21 234899999986 2 3211111322 2334444444
Q ss_pred ---cCCCEEEEeec
Q 021237 281 ---LHAKFIVPMKN 291 (315)
Q Consensus 281 ---l~~k~~ip~H~ 291 (315)
.+.++++|+|-
T Consensus 404 ~~~~~g~vlIp~fa 417 (636)
T 2ycb_A 404 TLRRGGKILIPVFA 417 (636)
T ss_dssp HHHHTCCEEEECCT
T ss_pred HHHcCCEEEEEECC
Confidence 58999999984
No 13
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.72 E-value=2.1e-17 Score=149.37 Aligned_cols=185 Identities=14% Similarity=0.110 Sum_probs=124.4
Q ss_pred EeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhh---h---
Q 021237 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLS---K--- 157 (315)
Q Consensus 84 lGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~---~--- 157 (315)
.|.++..+.+++.+||||| |.... +. +. .+..+||+|||||.|+|| ++++..|. +
T Consensus 8 ~g~~~~~~~i~~~~iLiD~---G~~~~----------~~---l~-~~~~~i~~IliTH~H~DH--~~gl~~l~~~~~~~~ 68 (280)
T 2e7y_A 8 KALFSTWIYYSPERILFDA---GEGVS----------TT---LG-SKVYAFKYVFLTHGHVDH--IAGLWGVVNIRNNGM 68 (280)
T ss_dssp ETTTEEEEEEGGGTEEEEE---CTTHH----------HH---HG-GGGGGCCEEECSCCCHHH--HTTHHHHHHHHHHHS
T ss_pred cCCceEEEEECCcEEEEEC---CcchH----------HH---hc-cCccCCCEEEEeCCchhH--HCCHHHHHHHHHHhc
Confidence 4555444445678999999 53320 10 01 123478999999999999 56766662 2
Q ss_pred --hCCCceEEEcCChHHHHhhc------------C-CceEEeCCCceEEecccCCCcEEEEEeecCCcCCCCCCCccEEE
Q 021237 158 --MSPNLKVIATPNAKTLLDPL------------F-QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYL 222 (315)
Q Consensus 158 --~~p~~~v~~~p~~~~~l~~~------------~-~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~~~~~~~~g~~ 222 (315)
+.++++||+++... .++.. . .++.++++++++++++.++.+++|+++|+.|... ....||+
T Consensus 69 ~~~~~~~~v~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~v~~~~~~H~~~---~~~~g~~ 144 (280)
T 2e7y_A 69 GDREKPLDVFYPEGNR-AVEEYTEFIKRANPDLRFSFNVHPLKEGERVFLRNAGGFKRYVQPFRTKHVSS---EVSFGYH 144 (280)
T ss_dssp GGGCCCEEEEEETTCH-HHHHHHHHHHHHCGGGTTTEEEEEECTTCCEECCCSSCSCEEEEEEECCSCSS---SCCEEEE
T ss_pred cCCCCCCEEEECccHH-HHHHHHHHHhhcccCCCCceEEEEcCCCCEEEeCCcccCCEEEEEEEccCCCC---CceEEEE
Confidence 12358899888765 54431 1 2577899999999850000079999999865421 1157899
Q ss_pred EEec-----------------------C--------CceeEEEcCCCCCccccccc-cCCcEEEeccCCCcCCC---ccc
Q 021237 223 VNSS-----------------------Q--------GQLTLYYEPHCVYNQNFLEK-ERSDIIITPVIKQLLPK---FTL 267 (315)
Q Consensus 223 i~~~-----------------------~--------~~~~i~~sGDt~~~~~~~~~-~~~Dl~i~~~~g~~~p~---~~~ 267 (315)
|+.. + ++.+|+|+|||++. +.+. .++|++++++ ....+. ...
T Consensus 145 i~~~~~~l~~~~~g~~~~~~~~l~~~~g~~~~~~~~~g~~i~ysgDt~~~--~~~~~~~~d~li~e~-t~~~~~~~~~~~ 221 (280)
T 2e7y_A 145 IFEVRRKLKKEFQGLDSKEISRLVKEKGRDFVTEEYHKKVLTISGDSLAL--DPEEIRGTELLIHEC-TFLDARDRRYKN 221 (280)
T ss_dssp EEEEEEEECGGGTTCCHHHHHHHHHHHCTGGGEEEEEEEEEEECCSCSSC--CHHHHTTCSCEEEEC-CBC--------C
T ss_pred EEEcccccCHhhcCCCHHHHHHHHhhcCCceecCCccCCEEEEECCCChH--HHHhhcCCCEEEEeC-CcCChhhHHhcC
Confidence 8641 1 23589999999988 3333 4899999997 322221 235
Q ss_pred cCCHHHHHHHHHHcCCCEEEEeecccc
Q 021237 268 VSGQEDAVKLAKLLHAKFIVPMKNGDL 294 (315)
Q Consensus 268 h~~~eea~~~~~~l~~k~~ip~H~g~f 294 (315)
|+++++|+++++++++++++++|++..
T Consensus 222 H~t~~~a~~~~~~~~~~~lvl~H~~~~ 248 (280)
T 2e7y_A 222 HAAIDEVMESVKAAGVKKVILYHISTR 248 (280)
T ss_dssp CCBHHHHHHHHHHHTCCEEEEESCCGG
T ss_pred CCCHHHHHHHHHHcCCCEEEEEeecCc
Confidence 999999999999999999999999973
No 14
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.72 E-value=8.6e-18 Score=156.31 Aligned_cols=193 Identities=15% Similarity=0.058 Sum_probs=133.4
Q ss_pred EeCeEEEEEeCCcE-EEEccccCCCCCCCCCccccCCccccCCCCC---CCCCCCCEEEEcCCCCCCCChhcHHHhhhhC
Q 021237 84 LEGNSWLWDLDGVK-VLVDPILVGNLDFGIPWLFDAGKKFLKSFQL---SDLPQVDCLLITQSLDDHCHLKTLKPLSKMS 159 (315)
Q Consensus 84 lGhss~lI~~~g~~-ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~---~~lp~iD~VlISH~H~DHld~~tl~~l~~~~ 159 (315)
-.++|++|+.+|.+ ||||+ |.... . .+ .+...+.. -++.+||+|||||.|+|| +.++..|.+..
T Consensus 39 R~~ss~li~~~~~~~iLiD~---G~~~~-~-~l-----~~~~~l~~~~~~~~~~i~~i~lTH~H~DH--~~gl~~l~~~~ 106 (321)
T 3jxp_A 39 RTQSSIALSDDGVHWILCNA---SPDIR-A-QL-----QAFAPMQPARALRDTGINAIVLLDSQIDH--TTGLLSLREGC 106 (321)
T ss_dssp BCBCEEEEESSSSSEEEECC---CTTHH-H-HH-----HTCGGGCCCSSSSCCSEEEEECSCCCHHH--HGGGGGGGGGC
T ss_pred ccceEEEEEeCCceEEEEeC---CchHH-H-HH-----HhcccccccccCCcccCCEEEECCCChhh--hhhHHHHHhcC
Confidence 36799999998886 99999 54320 0 00 00000000 134589999999999999 68888886543
Q ss_pred CCceEEEcCChHHHHhhc----------C--CceEEeCCCceEEe---cccCCCcEEEEEeecCCc-------CCC-CCC
Q 021237 160 PNLKVIATPNAKTLLDPL----------F--QNVTYVEPGQSSEI---EGRNGSKLRVKATAGPVL-------GPP-WQR 216 (315)
Q Consensus 160 p~~~v~~~p~~~~~l~~~----------~--~~i~~l~~~~~~~l---~~~~g~~l~i~~~p~~~~-------g~~-~~~ 216 (315)
+++||+++...+.++.. . .++.+++.++.+++ + +++|++++..|. +.. ...
T Consensus 107 -~~~vy~~~~~~~~l~~~~~~f~~~~~~~~~i~~~~i~~g~~~~i~~~~-----~~~V~~~~v~H~~~~~~~H~~~~~~~ 180 (321)
T 3jxp_A 107 -PHQVWCTDMVHQDLTTGFPLFNMLSHWNGGLQWNRIELEGSFVIDACP-----NLKFTPFPLRSAAPPYSPHRFDPHPG 180 (321)
T ss_dssp -CEEEEECHHHHHHTTTTSCHHHHHTTTTTCEEEEECCSSSCEECTTST-----TEEEEEEEECCCCCTTCTTTTSCCTT
T ss_pred -CCeEEECHHHHHHHHhhCccccccccccCceeEEEcCCCCeEEeccCC-----CeEEEEEEecCCccccccccccccCC
Confidence 78999988776666531 1 24678888889988 5 899999998632 110 002
Q ss_pred CccEEEEEecCCceeEEEcCCCCCcc-ccccc-cCCcEEEeccCCCcCC-------------CccccCCHH---HHHHHH
Q 021237 217 PENGYLVNSSQGQLTLYYEPHCVYNQ-NFLEK-ERSDIIITPVIKQLLP-------------KFTLVSGQE---DAVKLA 278 (315)
Q Consensus 217 ~~~g~~i~~~~~~~~i~~sGDt~~~~-~~~~~-~~~Dl~i~~~~g~~~p-------------~~~~h~~~e---ea~~~~ 278 (315)
...||+|+...++.+|+|+||+++.. .+.+. .++|++++++ ..+.. .-..|++.+ ||++++
T Consensus 181 ~~~Gy~i~~~~~g~~i~y~~Dt~~~~~~~~~~~~~~D~li~ea-t~~~d~e~~~~glk~r~~~~~gH~s~~~~~eA~~~a 259 (321)
T 3jxp_A 181 DNLGLMVEDTRTGGKLFYAPGLGQVDEKLLAMMHGADCLLVDG-TLWEDDEMQRRGVGTRTGREMGHLAQNGPGGTLEVL 259 (321)
T ss_dssp SEEEEEEEETTTCCEEEEESSCCCCCHHHHHHHHHCSEEEEEC-CCSSTTHHHHHTSCSCCCC-CCCCCSSSTTCHHHHH
T ss_pred CcEEEEEEecCCCcEEEEECCCCCCCHHHHHHhcCCCEEEEeC-CCCCcHHHhhccccccccCCCcccCCCCHHHHHHHH
Confidence 47899998311346999999999654 44433 4799999997 33321 112488777 999999
Q ss_pred HHcCCCEEEEeeccccc
Q 021237 279 KLLHAKFIVPMKNGDLD 295 (315)
Q Consensus 279 ~~l~~k~~ip~H~g~f~ 295 (315)
+++++|+++++|++.-.
T Consensus 260 ~~~~~k~lvLtH~s~~n 276 (321)
T 3jxp_A 260 DGFPRQRKVLIHINNTN 276 (321)
T ss_dssp TTCSSSEEEEESBCTTC
T ss_pred HhCCCCeEEEEEeCCCC
Confidence 99999999999999543
No 15
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.70 E-value=6.2e-17 Score=163.46 Aligned_cols=252 Identities=11% Similarity=0.088 Sum_probs=152.8
Q ss_pred CCCCCCChhhhhhhcccccCCCcCCCceeCCCCCCCCCCCcc--cccCCC-CCCccccccccccc---ccCCCceEEEEE
Q 021237 11 PFSCLPSRRSRTRTTDIILSALSKTPRFTSACRSSVPIHPTA--FNFPTR-RFSKVVSALVSEEN---AVATDVFKLTYL 84 (315)
Q Consensus 11 ~~g~~~~~~~~~~~~~~~~s~~~~~~~f~n~~~~~~~~~~~~--~~~~~~-~p~~~~p~~~~~~~---~~~~~~~~itwl 84 (315)
.||+. +++++++.+ +++|..+.|+-|.-.. .+-... ++.... .....++.+..+.. ..+.+.|+|+++
T Consensus 116 ~~g~~--~~~~~~i~~---~~~~~~~~~~~p~~~~-~~~~~i~~~l~~~~~~~~~~l~~i~~~i~~~~~~~~~~m~I~~L 189 (640)
T 2xr1_A 116 VIGKH--GATLREITK---QIGWIPKVVRTPPIKS-RTVKNIREFMRNNLKERKEILKTVGRKIHRECTSKDQWVRVTAL 189 (640)
T ss_dssp HHCSS--SHHHHHHHH---HHCSEEEEEECCSSCC-HHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCCSCCCCEEEEE
T ss_pred ccccc--hhhHHHHHh---ccCcccccccCCCcch-hHHHHHHHHHHHhHHHHHHHHHHHhhhccCcccCCCCceEEEEE
Confidence 78887 889999998 8999999998432110 000111 222211 00112332222211 123467999999
Q ss_pred e------CeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCC---CCCCCCCCEEEEcCCCCCCCChhcHHHh
Q 021237 85 E------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQ---LSDLPQVDCLLITQSLDDHCHLKTLKPL 155 (315)
Q Consensus 85 G------hss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~---~~~lp~iD~VlISH~H~DHld~~tl~~l 155 (315)
| +||++|+.++.+|||||+++... + ...++.+. .++..+||+|+|||.|.|| .+++..|
T Consensus 190 G~~~evg~s~~LI~~~~~~ILID~G~~~~~---------~-~~~l~~l~~~~~~~~~~Id~VllTH~H~DH--iGgl~~L 257 (640)
T 2xr1_A 190 GGCKEVGRSCFLLSTPESRILIDCGVNVGS---------D-ENMTPYLYVPEVFPLNQIDAVIVTHAHLDH--QGLVPLL 257 (640)
T ss_dssp ECSSSSBCCEEEEECSSCEEEECCCCBCSS---------C-SSCCCCTTSTTTCSGGGCCEEECCSSCHHH--HTTHHHH
T ss_pred ecCCCCCCcEEEEEECCeEEEEeCCCCccc---------c-ccccccccccccCCcccCcEEEECCCChhh--hccHHHH
Confidence 8 89999999999999999554211 0 11222222 1144589999999999999 6899988
Q ss_pred hhhCCCceEEEcCChHHHHhhc----------------C---------CceEEeCCCceEEecccCCCcEEEEEeecCCc
Q 021237 156 SKMSPNLKVIATPNAKTLLDPL----------------F---------QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVL 210 (315)
Q Consensus 156 ~~~~p~~~v~~~p~~~~~l~~~----------------~---------~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~ 210 (315)
.+...+++||+++.+...++.. + .++..+++++.+++. ++++|++.++.|.
T Consensus 258 ~~~~~~~~Iy~t~~t~~ll~~~l~d~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~g~~i~l~----gg~~v~~~~~GH~ 333 (640)
T 2xr1_A 258 FKYGYEGPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESGMVAKTLKHTIPLDYEEVTDIA----PDIKLTFHNAGHI 333 (640)
T ss_dssp HHTTCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHTEEECCTTCCEEEE----TTEEEEEEECSSS
T ss_pred HhcCCCCeEEECHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHHhceEEeCCCCEEEec----CCEEEEEEcCCCC
Confidence 7633478999988765433210 1 147789999999993 2789987765442
Q ss_pred CCCCCCCccEEEEEecCCceeEEEcCCCCCccc-cc-----cccCCcEEEeccCCCcCCCccccCCH----HHHHHHHH-
Q 021237 211 GPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQN-FL-----EKERSDIIITPVIKQLLPKFTLVSGQ----EDAVKLAK- 279 (315)
Q Consensus 211 g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~-~~-----~~~~~Dl~i~~~~g~~~p~~~~h~~~----eea~~~~~- 279 (315)
. ..++|.++.+++..+|+|+||+++... .. ...++|++++++ . |...-..|.+. ++.++.++
T Consensus 334 ~-----Gs~~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLi~Es-T-~g~~~~~h~s~~~~~~~l~~~i~~ 406 (640)
T 2xr1_A 334 L-----GSAISHFHIGDGLHNVVFTGDYKYEKTRLFDPAVNKFPRVETVISEA-T-YGNANAFQPALKDAEKHLQMVVKN 406 (640)
T ss_dssp T-----TCEEEEEEETTTTEEEEECCSCCSSCCSSCCCCCCBCSCCSEEEEEC-T-TCSTTCCCCCHHHHHHHHHHHC--
T ss_pred c-----CcEEEEEEECCceEEEEEECCCCCCCccccccccccCCCCcEEEECC-C-CCCCccCCCCHHHHHHHHHHHHHH
Confidence 1 257888887542128999999987653 21 124899999986 2 22111113332 22333333
Q ss_pred --HcCCCEEEEeec
Q 021237 280 --LLHAKFIVPMKN 291 (315)
Q Consensus 280 --~l~~k~~ip~H~ 291 (315)
+.+.+.++|+|.
T Consensus 407 ~~~~~g~vlIp~fa 420 (640)
T 2xr1_A 407 TIERGGIAVIPAFA 420 (640)
T ss_dssp ------CEEEECCT
T ss_pred HHhcCCeEEEEecc
Confidence 246788999886
No 16
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.68 E-value=4.6e-16 Score=150.17 Aligned_cols=185 Identities=17% Similarity=0.142 Sum_probs=126.3
Q ss_pred eEEEEEeC------eEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcH
Q 021237 79 FKLTYLEG------NSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTL 152 (315)
Q Consensus 79 ~~itwlGh------ss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl 152 (315)
|+|+++|. ||++|+.++.+|||||++. . +. .. .+.+..+. .+..+||+|+|||.|.|| .+++
T Consensus 1 M~i~~LG~~~~vg~s~~li~~~~~~iLID~G~~---~-~~-~~----~~~~~~~~-~~~~~Id~VllTH~H~DH--~ggl 68 (431)
T 3iek_A 1 MRIVPFGAAREVTGSAHLLLAGGRRVLLDCGMF---Q-GK-EE----ARNHAPFG-FDPKEVDAVLLTHAHLDH--VGRL 68 (431)
T ss_dssp CEEEECSCSSSSSCCCEEEEETTEEEEECCCCC---C-GG-GG----GGGGSCCS-SCGGGCCEEECSCCCHHH--HTTH
T ss_pred CEEEEeCCCCCCCCcEEEEEECCeEEEEeCCCC---c-ch-hh----ccchhhcC-CCcccCCEEEECCCChHH--hccH
Confidence 67889886 8999999999999999442 1 10 00 11112221 123479999999999999 6899
Q ss_pred HHhhhhCCCceEEEcCChHHHHhhc------------C---------CceEEeCCCceEEecccCCCcEEEEEeecCCcC
Q 021237 153 KPLSKMSPNLKVIATPNAKTLLDPL------------F---------QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLG 211 (315)
Q Consensus 153 ~~l~~~~p~~~v~~~p~~~~~l~~~------------~---------~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g 211 (315)
..|.+...+.++|+++...+.++.+ + .++..+++++.++++ +++|+++++.|.-
T Consensus 69 p~l~~~~~~~~Iy~t~~t~~l~~~~l~d~~~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~l~-----g~~v~~~~agH~~ 143 (431)
T 3iek_A 69 PKLFREGYRGPVYATRATVLLMEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLG-----ALSLAFGQAGHLP 143 (431)
T ss_dssp HHHHHTTCCSCEEECHHHHHHHHHHHHHHHHHCSSCSSCHHHHHHHHHTEEECCTTCCEEET-----TEEEEEEECCSST
T ss_pred HHHHHcCCCCeEEEcHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHhccEEcCCCCeEEeC-----CEEEEEEeCCCCc
Confidence 9987764578999988876544321 0 358899999999996 8999999775421
Q ss_pred CCCCCCccEEEEEecCCceeEEEcCCCCCccccc-----cccCCcEEEeccCCCcCCCccccCCH----HH---HHHHHH
Q 021237 212 PPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFL-----EKERSDIIITPVIKQLLPKFTLVSGQ----ED---AVKLAK 279 (315)
Q Consensus 212 ~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~-----~~~~~Dl~i~~~~g~~~p~~~~h~~~----ee---a~~~~~ 279 (315)
..++|.++.++ .+|+|+||+++..... ...++|++++++ . |... .|... ++ +++...
T Consensus 144 -----Gs~~~~i~~~~--~~ilfsGD~~~~~~~~l~~~~~~~~~D~LI~Es-T-y~~~--~h~~~~~~~~~l~~~i~~~~ 212 (431)
T 3iek_A 144 -----GSAFVVAQGEG--RTLVYSGDLGNREKDVLPDPSLPPLADLVLAEG-T-YGDR--PHRPYRETVREFLEILEKTL 212 (431)
T ss_dssp -----TCEEEEEEETT--EEEEECCCCCCTTSSSSCCCCBCCCCSEEEEEC-T-TTTC--CCCCHHHHHHHHHHHHHHHH
T ss_pred -----CceEEEEEECC--EEEEEeCCCCCCCCcccCCccccCCccEEEEEc-c-cCCc--CCCChHHHHHHHHHHHHHHH
Confidence 25788898743 6999999999865432 124899999997 2 2211 12222 22 233333
Q ss_pred HcCCCEEEEeec
Q 021237 280 LLHAKFIVPMKN 291 (315)
Q Consensus 280 ~l~~k~~ip~H~ 291 (315)
+.+.+++||++-
T Consensus 213 ~~gg~vlIp~fa 224 (431)
T 3iek_A 213 SQGGKVLIPTFA 224 (431)
T ss_dssp HTTCEEEEECCT
T ss_pred HcCCeEEEEecc
Confidence 457888888764
No 17
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.66 E-value=2.3e-15 Score=144.88 Aligned_cols=199 Identities=12% Similarity=0.142 Sum_probs=129.6
Q ss_pred CceEEEEEe------CeEEEEEeCCcEEEEccccCCCCCC--CCCc---cccCCccccCCC--------------CCCCC
Q 021237 77 DVFKLTYLE------GNSWLWDLDGVKVLVDPILVGNLDF--GIPW---LFDAGKKFLKSF--------------QLSDL 131 (315)
Q Consensus 77 ~~~~itwlG------hss~lI~~~g~~ILiDP~~~g~~s~--p~~~---~~~~~~~~~~~~--------------~~~~l 131 (315)
+.|+|+++| .||++|+.++.+|||||+.+..... |... +. + ...++.+ ...+.
T Consensus 5 ~~m~i~~lG~~~~~g~n~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~l~~~~~~~p~~~~~~~~ 82 (429)
T 2az4_A 5 AKTTVTFHSGILTIGGTVIEVAYKDAHIFFDFGTEFRPELDLPDDHIETLI-N-NRLVPELKDLYDPRLGYEYHGAEDKD 82 (429)
T ss_dssp CCEEEEEEECTTSSSCCEEEEEETTEEEEECCCCCCCTTCCCSCCCHHHHH-H-TTSSCCCSSCBCGGGCCCCCSSCCCC
T ss_pred CceEEEEeeCCCccCCeEEEEEECCeEEEEecCCCCCcccCCCcchhhhcc-C-CcccCCchhhhcccccccchhhhhcc
Confidence 458999997 5899999999999999954321100 0000 00 0 0011111 02344
Q ss_pred CCCCEEEEcCCCCCCCChhcHHHhhhhCCCceEEEcCChHHHHhhc-----------------CCceEEeCCCceEEecc
Q 021237 132 PQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKVIATPNAKTLLDPL-----------------FQNVTYVEPGQSSEIEG 194 (315)
Q Consensus 132 p~iD~VlISH~H~DHld~~tl~~l~~~~p~~~v~~~p~~~~~l~~~-----------------~~~i~~l~~~~~~~l~~ 194 (315)
.+||+|||||.|.|| ++++..|.+ ++++|+++.....++.. ..++..+++++.++++
T Consensus 83 ~~i~~v~lTH~H~DH--iggl~~l~~---~~~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g- 156 (429)
T 2az4_A 83 YQHTAVFLSHAHLDH--SRMINYLDP---AVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREMIGLNKNDVIKVG- 156 (429)
T ss_dssp CSEEEEECSCSCHHH--HTTGGGBCT---TSCEEEEHHHHHHHHHHTTTSCSSCCCTTSCTTCCCCCEEECTTCEEEET-
T ss_pred ccCCEEEECCchHHH--hCcHhHhcC---CCCEEECHHHHHHHHHHHHhCccccccccccccccceEEEeCCCCeEEEC-
Confidence 589999999999999 688888874 68899988876654321 1356789999999996
Q ss_pred cCCCcEEEEEeecCCcCCCCCCCccEEEEEecCCceeEEEcCCCCCccc-------cccc-cCCcEEEeccCCCcCCC--
Q 021237 195 RNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQN-------FLEK-ERSDIIITPVIKQLLPK-- 264 (315)
Q Consensus 195 ~~g~~l~i~~~p~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~-------~~~~-~~~Dl~i~~~~g~~~p~-- 264 (315)
+++|+++++.|+.+ ..++|.|+.++ .+++|+||+.+... +.+. .++|++++++.....+.
T Consensus 157 ----~~~v~~~~~~H~~~----gs~~~~i~~~~--~~i~~tGD~~~~~~~~~~~~~~~~~~~~~d~Li~Est~~~~~~~~ 226 (429)
T 2az4_A 157 ----EISVEIVPVDHDAY----GASALLIRTPD--HFITYTGDLRLHGHNREETLAFCEKAKHTELLMMEGVSISFPERE 226 (429)
T ss_dssp ----TEEEEEEECCCSST----TCEEEEEEETT--EEEEECCSCCSSSTTHHHHHHHHHHHTTCSEEEEECCGGGSCCCC
T ss_pred ----CEEEEEEECCCCCh----hhEEEEEEeCC--cEEEECCCcccCCCchHHHHHHHHhccCCCEEEECCCCcCccccc
Confidence 79999999865322 26789998854 59999999975432 3333 28999999973111110
Q ss_pred ----ccccCCHHHHHHHHHHc---CCCEEEEeeccc
Q 021237 265 ----FTLVSGQEDAVKLAKLL---HAKFIVPMKNGD 293 (315)
Q Consensus 265 ----~~~h~~~eea~~~~~~l---~~k~~ip~H~g~ 293 (315)
...|++.+++.+.+.++ .+++++.+|...
T Consensus 227 ~~~~~~~~~s~~~~~~~i~~~~~~~~~rlil~h~~~ 262 (429)
T 2az4_A 227 PDPAQIAVVSEEDLVQHLVRLELENPNRQITFNGYP 262 (429)
T ss_dssp CCTTBCCCCSHHHHHHHHHHHHHTCSSSCEEEEECT
T ss_pred ccccCCCCCCHHHHHHHHHHHHHhCCCcEEEEEecc
Confidence 11277777776655543 356555566553
No 18
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.65 E-value=3.5e-15 Score=144.99 Aligned_cols=187 Identities=14% Similarity=0.161 Sum_probs=121.2
Q ss_pred CCceEEEEEe------CeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCCh
Q 021237 76 TDVFKLTYLE------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHL 149 (315)
Q Consensus 76 ~~~~~itwlG------hss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~ 149 (315)
.+.|+|+++| .||++|+.++.+|||||++..... . .+.++.+...+..+||+|||||.|.|| .
T Consensus 9 ~~~m~i~~LG~~~~vg~s~~li~~~~~~iLID~G~~~~~~----~-----~~~~~~l~~~~~~~Id~VllTH~H~DH--~ 77 (459)
T 2i7t_A 9 SDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLE----G-----MDALPYIDLIDPAEIDLLLISHFHLDH--C 77 (459)
T ss_dssp CEEEEEEEEESSSSSSSCEEEEEETTEEEEECCCCCTTSC----G-----GGGSCCGGGSCGGGCCEEECCCSSHHH--H
T ss_pred CCeEEEEEEecCCCCCCCEEEEEECCeEEEEeCCCCcCcc----c-----ccccCcccccCcccCcEEEECCCChhh--h
Confidence 4568999998 699999999999999995531110 0 011221212234479999999999999 6
Q ss_pred hcHHHhhhhCC-CceEEEcCChHHHHh----hc---------------------CCceEEeCCCceEEecccCCCcEEEE
Q 021237 150 KTLKPLSKMSP-NLKVIATPNAKTLLD----PL---------------------FQNVTYVEPGQSSEIEGRNGSKLRVK 203 (315)
Q Consensus 150 ~tl~~l~~~~p-~~~v~~~p~~~~~l~----~~---------------------~~~i~~l~~~~~~~l~~~~g~~l~i~ 203 (315)
+++..|..+.. +.++|+++.....++ .. ..++..+++++.++++ +++++
T Consensus 78 ggl~~l~~~~~~~~~iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----gi~v~ 152 (459)
T 2i7t_A 78 GALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVA-----GIKFW 152 (459)
T ss_dssp TTHHHHHHHSSCCSEEEEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEET-----TEEEE
T ss_pred hhhHHHHHhcCCCCCEEechHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHhccEEeCCCCEEEEC-----CEEEE
Confidence 88988865432 578998876543221 10 1267889999999996 79998
Q ss_pred EeecCCcCCCCCCCccEEEEEecCCceeEEEcCCCCCcccccc----c--cCCcEEEeccCCCcCCCccccCCHHHHH--
Q 021237 204 ATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLE----K--ERSDIIITPVIKQLLPKFTLVSGQEDAV-- 275 (315)
Q Consensus 204 ~~p~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~----~--~~~Dl~i~~~~g~~~p~~~~h~~~eea~-- 275 (315)
+.++.|.- ..++|.++.++ .+|+|+||+++...... . .++|++++++ .|.. ..|...++..
T Consensus 153 ~~~~GH~~-----Gs~~~~i~~~~--~~il~sGD~~~~~~~~~~~~~~~~~~~D~Li~Es--ty~~--~~~~~~~~~~~~ 221 (459)
T 2i7t_A 153 CYHAGHVL-----GAAMFMIEIAG--VKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIES--TYGT--HIHEKREEREAR 221 (459)
T ss_dssp EEECCSST-----TCEEEEEEETT--EEEEECCSCCCC-----CCCCCCSSCCSEEEEEC--TTTT--CCCCCHHHHHHH
T ss_pred EEeCCCcc-----CcEEEEEEECC--cEEEEeCCCCCCCCcccCCCCcCCCCCeEEEECC--CCCC--CCCCChHHHHHH
Confidence 87654431 25789898753 69999999998775432 1 3799999986 2332 1244443332
Q ss_pred -----HHHHHcCCCEEEEe
Q 021237 276 -----KLAKLLHAKFIVPM 289 (315)
Q Consensus 276 -----~~~~~l~~k~~ip~ 289 (315)
+...+.+.+.++|+
T Consensus 222 l~~~i~~~~~~~g~vlip~ 240 (459)
T 2i7t_A 222 FCNTVHDIVNRGGRGLIPV 240 (459)
T ss_dssp HHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 22223456667666
No 19
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.64 E-value=7.1e-16 Score=156.07 Aligned_cols=218 Identities=13% Similarity=0.065 Sum_probs=139.8
Q ss_pred CCCCCCChhhhhhhcccccCCCcCCCceeCCCCCCCCCC-Ccc--cccCCC----CCCccccccccccc---ccCCCceE
Q 021237 11 PFSCLPSRRSRTRTTDIILSALSKTPRFTSACRSSVPIH-PTA--FNFPTR----RFSKVVSALVSEEN---AVATDVFK 80 (315)
Q Consensus 11 ~~g~~~~~~~~~~~~~~~~s~~~~~~~f~n~~~~~~~~~-~~~--~~~~~~----~p~~~~p~~~~~~~---~~~~~~~~ 80 (315)
.||+. +++++++.+ +++|..+.|+-|.-. ... ... ++.... .+... +..+.. ....+.|+
T Consensus 121 ~~g~~--~~~~~~i~~---~~~~~~~~~~~p~~~--~~~~~~i~~~l~~~~~~~~~~l~~---~~~~i~~~~~~~~~~m~ 190 (651)
T 3af5_A 121 VIGKN--GETLRLITQ---KVKWAPKVVRTPPLQ--SQTIYSIRQILQTESKDRRKFLRQ---VGRNIYRKPEYKSRWIR 190 (651)
T ss_dssp TSCTT--SHHHHHHHH---HHCSEEEEEECCSSC--CHHHHHHHHHHHHCHHHHHHHHHH---HHHHHTSSSCCCCSCEE
T ss_pred ccccc--chhHHHHhh---ccCcccccccCCCCC--chHHHHHHHHHHhhHHHHHHHHHH---hccceecCCcCCCCceE
Confidence 88987 889999998 899999989843211 100 111 222110 11111 111111 12346799
Q ss_pred EEEEe------CeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCC--C--CC--CCCCEEEEcCCCCCCCC
Q 021237 81 LTYLE------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQL--S--DL--PQVDCLLITQSLDDHCH 148 (315)
Q Consensus 81 itwlG------hss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~--~--~l--p~iD~VlISH~H~DHld 148 (315)
|+++| +||++|+.++.+|||||+++.... ..+ ...++.+.. . +. .+||+|||||.|.||
T Consensus 191 i~~LG~~~~vg~s~~LI~~~~~~ILID~G~~~~~~----~~g---~~~l~~l~~~~~g~~~~~~~Id~VllTH~H~DH-- 261 (651)
T 3af5_A 191 ITGLGGFREVGRSALLVQTDESFVLVDFGVNVAML----NDP---YKAFPHFDAPEFQYVLREGLLDAIIITHAHLDH-- 261 (651)
T ss_dssp EEEEECSSSSSCCEEEEEESSCEEEECCCCCGGGT----TCH---HHHSCCTTCHHHHHHHHTTCCCEEECSCSSHHH--
T ss_pred EEEEecCCCCCCcEEEEEECCcEEEEeCCCChhcc----ccc---hhhcccccchhhccCcccCCCCEEEECCCChHh--
Confidence 99997 789999999999999995531110 000 122232221 1 23 579999999999999
Q ss_pred hhcHHHhhhhC-CCceEEEcCChHHHHhhc----------------C---------CceEEeCCCceEEe-cccCCCcEE
Q 021237 149 LKTLKPLSKMS-PNLKVIATPNAKTLLDPL----------------F---------QNVTYVEPGQSSEI-EGRNGSKLR 201 (315)
Q Consensus 149 ~~tl~~l~~~~-p~~~v~~~p~~~~~l~~~----------------~---------~~i~~l~~~~~~~l-~~~~g~~l~ 201 (315)
.+++..|.+.. .+++||+++.+...++.. + .++..+++++.+++ + +++
T Consensus 262 iGglp~L~~~~~~~~pIy~t~~t~~ll~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~l~g-----gi~ 336 (651)
T 3af5_A 262 CGMLPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISP-----DIR 336 (651)
T ss_dssp HTTHHHHHHTTCCCSCEEECHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTEEECCTTCCEEEET-----TEE
T ss_pred hcCHHHHHhcCCCCceEEEcHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHhhhcEEEeCCCCEEEecC-----CEE
Confidence 68998887632 268999988775543210 1 14678999999999 5 799
Q ss_pred EEEeecCCcCCCCCCCccEEEEEecCCceeEEEcCCCCCccc--cc----cccCCcEEEecc
Q 021237 202 VKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQN--FL----EKERSDIIITPV 257 (315)
Q Consensus 202 i~~~p~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~--~~----~~~~~Dl~i~~~ 257 (315)
|++.++.|.- ..++|.++.+++..+|+|+||+++... +. ...++|++++++
T Consensus 337 v~~~~~gH~~-----Gs~~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLI~Es 393 (651)
T 3af5_A 337 LTLHNAGHIL-----GSAIVHLHIGNGLHNIAITGDFKFIPTRLLEPANAKFPRLETLVMES 393 (651)
T ss_dssp EEEEECSSST-----TCEEEEEEETTTTTCEEECCSCCCSCCSSCCCCCCBCSSCSEEEEEC
T ss_pred EEEecCCCCc-----CcEEEEEEECCCceEEEEeCCCCCCcccccccccccCCCCCEEEECC
Confidence 9888764421 257888887542128999999988664 22 234899999996
No 20
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.61 E-value=4.9e-16 Score=141.44 Aligned_cols=180 Identities=13% Similarity=0.101 Sum_probs=116.7
Q ss_pred EeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCce
Q 021237 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLK 163 (315)
Q Consensus 84 lGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~~ 163 (315)
.|+|||+|+.++..|||||....... .+ ...+...... ..+||+|+|||.|+|| ++++..|.++ ++++
T Consensus 53 ~~~n~~li~~~~~~iLID~G~~~~~~----~~----~~~l~~~g~~-~~~i~~ii~TH~H~DH--~gg~~~l~~~-~~~~ 120 (294)
T 3m8t_A 53 DGIAVYVIKTSQGLILMDTAMPQSTG----MI----KDNIAKLGFK-VADIKLILNTHAHLDH--TGGFAEIKKE-TGAQ 120 (294)
T ss_dssp SSSCCEEEEETTEEEEECCCCGGGHH----HH----HHHHHHTTCC-GGGEEEEECSCCCHHH--HTTHHHHHHH-HCCE
T ss_pred CCeEEEEEEECCceEEEECCCchhHH----HH----HHHHHHcCCC-HHHCcEEEECCCCccc--cccHHHHhhc-cCCE
Confidence 46899999999999999994421000 00 0111111111 1168999999999999 7899999776 3789
Q ss_pred EEEcCChHHHHhhc---C------------CceEEeCCCceEEecccCCCcEEEEE--eecCCcCCCCCCCccEEEEEec
Q 021237 164 VIATPNAKTLLDPL---F------------QNVTYVEPGQSSEIEGRNGSKLRVKA--TAGPVLGPPWQRPENGYLVNSS 226 (315)
Q Consensus 164 v~~~p~~~~~l~~~---~------------~~i~~l~~~~~~~l~~~~g~~l~i~~--~p~~~~g~~~~~~~~g~~i~~~ 226 (315)
+|+++.....++.. + .....++.++.++++ +++|++ +|+|.. ..++|.+...
T Consensus 121 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~~pgHt~------g~~~~~~~~~ 189 (294)
T 3m8t_A 121 LVAGERDKPLLEGGYYPGDEKNEDLAFPAVKVDRAVKEGDRVTLG-----DTTLTAHATPGHSP------GCTSWEMTVK 189 (294)
T ss_dssp EEEEGGGHHHHHHTCBTTBTTCGGGCCCCCCCSEEECTTCEEEET-----TEEEEEEECCSSST------TCEEEEEEEE
T ss_pred EEEChHHHHHHhcccccCccccccCCCCCCCCceEeCCCCEEEeC-----CEEEEEEeCCCCCc------cCEEEEEEcc
Confidence 99999887766543 1 234678889999996 555544 555322 2567877753
Q ss_pred CC--ceeEEEcCCCCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHcCCCEEEEeecccccccch
Q 021237 227 QG--QLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGF 299 (315)
Q Consensus 227 ~~--~~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l~~k~~ip~H~g~f~~~~~ 299 (315)
++ ..+++|+||+.+...... +....+. ......++++.++.+++++++|.|.+.++....
T Consensus 190 ~~~~~~~~lf~GD~~~~~~~~~-----------~~~~~~~--~~~~~~~sl~~l~~l~~~~v~pgHg~~~~~~~~ 251 (294)
T 3m8t_A 190 DGKEDREVLFFCSGTVALNRLV-----------GQPTYAG--IVDDYRATFAKAKAMKIDVLLGPHPEVYGMQAK 251 (294)
T ss_dssp ETTEEEEEEECCCCCCTTCCCS-----------SSCSSTT--HHHHHHHHHHHHHHSCCSEEECSSGGGTTHHHH
T ss_pred CCCccceEEEEcCccCCCCcCc-----------CCCCCCc--hHHHHHHHHHHHHCCCCCEEEcCCCChhchHHH
Confidence 21 127999999985432111 0111111 112346778888899999999999999877643
No 21
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=99.61 E-value=5e-15 Score=147.48 Aligned_cols=165 Identities=12% Similarity=0.118 Sum_probs=114.1
Q ss_pred CCCceEEEEEe------CeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCC--CCCCCCCCEEEEcCCCCCC
Q 021237 75 ATDVFKLTYLE------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQ--LSDLPQVDCLLITQSLDDH 146 (315)
Q Consensus 75 ~~~~~~itwlG------hss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~--~~~lp~iD~VlISH~H~DH 146 (315)
..+.|+++.+| .||++|+.++..|||||..+-... ... +....+|.+. ..+..+||+|||||.|.||
T Consensus 13 ~~~~~~i~~LGg~~eig~n~~li~~~~~~iLID~G~~~~~~---~~~--g~~~~~p~~~~l~~~~~~Id~I~iTH~H~DH 87 (562)
T 3bk2_A 13 PQDHVEIIPLGGMGEIGKNITVFRFRDEIFVLDGGLAFPEE---GMP--GVDLLIPRVDYLIEHRHKIKAWVLTHGHEDH 87 (562)
T ss_dssp -CCCEEEEEEESBSBSSCCEEEEEETTEEEEECCCCBCCCT---TST--TCCEEEECCHHHHHTGGGEEEEECCCCCHHH
T ss_pred CCCcEEEEEecCCCCcCCCEEEEEECCeEEEEECCCCCCcc---ccc--cccccccchhhhhcCcccCcEEEECCCChHH
Confidence 34568899998 689999999999999995431111 000 0001111111 1133479999999999999
Q ss_pred CChhcHHHhhhhCC----CceEEEcCChHHHHhhc---------CCceEEeCCCceEEecccCCCc-EEEEEeecCCcCC
Q 021237 147 CHLKTLKPLSKMSP----NLKVIATPNAKTLLDPL---------FQNVTYVEPGQSSEIEGRNGSK-LRVKATAGPVLGP 212 (315)
Q Consensus 147 ld~~tl~~l~~~~p----~~~v~~~p~~~~~l~~~---------~~~i~~l~~~~~~~l~~~~g~~-l~i~~~p~~~~g~ 212 (315)
.+++..|.++++ ++++|+++...+.++.. ..++.++++++.++++ + ++|+++++.|+.+
T Consensus 88 --iggl~~L~~~~~~~~~~~pIy~~~~t~~~l~~~l~~~~~~~~~~~~~~v~~g~~~~lg-----~~~~v~~~~~~H~~~ 160 (562)
T 3bk2_A 88 --IGGLPFLLPMIFGKESPVPIYGARLTLGLLRGKLEEFGLRPGAFNLKEISPDDRIQVG-----RYFTLDLFRMTHSIP 160 (562)
T ss_dssp --HTTHHHHHHHHHCSCCCSEEEEEHHHHHHHHHHHHHTTCCSTTSEEEEECTTCEEEET-----TTEEEEEEECCCSSS
T ss_pred --hCCHHHHHHhhccccCCceEEeCHHHHHHHHHHHHHcCCCcCCceEEEECCCCEEEeC-----CCEEEEEEECCCCCc
Confidence 688888876543 68999998876655432 2357889999999996 5 9999999876422
Q ss_pred CCCCCccEEEEEecCCceeEEEcCCCCCccc--------c---ccc--cCCcEEEecc
Q 021237 213 PWQRPENGYLVNSSQGQLTLYYEPHCVYNQN--------F---LEK--ERSDIIITPV 257 (315)
Q Consensus 213 ~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~--------~---~~~--~~~Dl~i~~~ 257 (315)
..++|.|+.++ .+|+|+||+.+... + .+. .++|+++++.
T Consensus 161 ----gs~~~~i~~~~--~~il~tGD~~~~~~~~~g~~~d~~~l~~~~~~~~d~Li~Es 212 (562)
T 3bk2_A 161 ----DNSGVVIRTPI--GTIVHTGDFKLDPTPIDGKVSHLAKVAQAGAEGVLLLIADA 212 (562)
T ss_dssp ----SCEEEEEEETT--EEEEECCSCCCCSSCTTSCCCCCHHHHHHHHHCCSEEEEEC
T ss_pred ----ccEEEEEEECC--eEEEEcCCCCCCCCCCCCCcccHHHHHHhhccCCCEEEecc
Confidence 26789998854 49999999965321 1 122 3799999986
No 22
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=99.60 E-value=1.3e-14 Score=144.17 Aligned_cols=193 Identities=15% Similarity=0.152 Sum_probs=127.8
Q ss_pred CCceEEEEEe------CeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCC--CCCCCCCCEEEEcCCCCCCC
Q 021237 76 TDVFKLTYLE------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQ--LSDLPQVDCLLITQSLDDHC 147 (315)
Q Consensus 76 ~~~~~itwlG------hss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~--~~~lp~iD~VlISH~H~DHl 147 (315)
.+.++++.+| .||++|+.++..|||||+.+-... ... +.....|.+. .++..+||+|+|||.|.||
T Consensus 6 ~~~i~i~~lGg~~eiG~n~~li~~~~~~iLID~G~~~~~~---~~~--g~d~iip~~~~l~~~~~~Id~I~lTH~H~DH- 79 (555)
T 3zq4_A 6 NDQTAVFALGGLGEIGKNTYAVQFQDEIVLIDAGIKFPED---ELL--GIDYVIPDYTYLVKNEDKIKGLFITHGHEDH- 79 (555)
T ss_dssp CCSEEEEEEESBSSSSCCEEEEEETTEEEEEEECCBCCCT---TST--TCSEEEECCHHHHTTTTTEEEEEESCCCHHH-
T ss_pred CCcEEEEEcCCCCccCCEEEEEEECCeEEEEeCCCCCCcc---ccc--cccccccCHHHHhcCccCCCEEEECCCchhh-
Confidence 4578888887 389999999999999995432111 000 0011112111 1234589999999999999
Q ss_pred ChhcHHHhhhhCCCceEEEcCChHHHHhhc--------CCceEEeCCCceEEecccCCCcEEEEEeecCCcCCCCCCCcc
Q 021237 148 HLKTLKPLSKMSPNLKVIATPNAKTLLDPL--------FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPEN 219 (315)
Q Consensus 148 d~~tl~~l~~~~p~~~v~~~p~~~~~l~~~--------~~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~~~~~~~~ 219 (315)
++++..|.+++ ++++|+++.....++.. ..++..+++++.++++ +++|+++++.|+.+ ..+
T Consensus 80 -iggl~~l~~~~-~~pIy~t~~t~~ll~~~l~~~~~~~~~~~~~v~~g~~~~ig-----~~~v~~~~~~H~~p----gs~ 148 (555)
T 3zq4_A 80 -IGGIPYLLRQV-NIPVYGGKLAIGLLRNKLEEHGLLRQTKLNIIGEDDIVKFR-----KTAVSFFRTTHSIP----DSY 148 (555)
T ss_dssp -HTTHHHHHTTC-CCCEEECHHHHHHHHHHHHHHSTTTTCCEEECCTTCCEEET-----TEEEEEEEEBCSSS----SEE
T ss_pred -hCCHHHHHHhc-CceEEECHHHHHHHHHHHHHcCccCCCceEEeCCCCEEEEC-----CEEEEEEeCCCCCc----CcE
Confidence 78999998765 78999998876655432 1468899999999996 79998888865422 267
Q ss_pred EEEEEecCCceeEEEcCCCCCccc-------c---ccc--cCCcEEEeccCCCcCCCccccCCHHHHHHHHH----HcCC
Q 021237 220 GYLVNSSQGQLTLYYEPHCVYNQN-------F---LEK--ERSDIIITPVIKQLLPKFTLVSGQEDAVKLAK----LLHA 283 (315)
Q Consensus 220 g~~i~~~~~~~~i~~sGDt~~~~~-------~---~~~--~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~----~l~~ 283 (315)
+|+++.++ .+++|+||+.+... + .++ .++|+++++......|.. ...-++..+.+. ..+.
T Consensus 149 ~~~i~~~~--~~il~tGD~~~~~~~~~g~~d~~~l~~l~~~~~d~Li~esT~~~~~~~--~~se~~v~~~i~~~~~~~~g 224 (555)
T 3zq4_A 149 GIVVKTPP--GNIVHTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDSTNSENPEF--TMSERRVGESIHDIFRKVDG 224 (555)
T ss_dssp EEEEEETT--EEEEECCSCBCCSSCSSSCCCHHHHHHHHHTCEEEEEEECTTTTCCSC--CCCHHHHHHHHHHHHHHCCS
T ss_pred EEEEEECC--cEEEEeCCCCCCCCcCcCccCHHHHHHhcccCCcEEEecCcccCCCCC--CCCHHHHHHHHHHHHHhCCC
Confidence 89998864 59999999987543 1 111 278999999732222222 123333333333 3356
Q ss_pred CEEEEe
Q 021237 284 KFIVPM 289 (315)
Q Consensus 284 k~~ip~ 289 (315)
+.++|+
T Consensus 225 rvii~~ 230 (555)
T 3zq4_A 225 RIIFAT 230 (555)
T ss_dssp CEEEEC
T ss_pred EEEEEE
Confidence 666654
No 23
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=99.54 E-value=1.3e-14 Score=132.28 Aligned_cols=180 Identities=14% Similarity=0.109 Sum_probs=112.0
Q ss_pred EeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCce
Q 021237 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLK 163 (315)
Q Consensus 84 lGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~~ 163 (315)
.|+|||+|+.++..|||||.+..... .+ ...+...... ..+||+|++||.|+|| ++++..+.+++ +++
T Consensus 56 ~~~~~~li~~~~~~iLiD~G~~~~~~----~~----~~~l~~~g~~-~~~i~~ii~TH~H~DH--~gg~~~l~~~~-~~~ 123 (303)
T 4ax1_B 56 CGISALLVTSDAGHILVDAATPQAGP----QI----LANIRALGFR-PEDVRAIVFSHEHFDH--AGSLAELQKAT-GAP 123 (303)
T ss_dssp SSSCCEEECCTTCEEEECCBSTTCHH----HH----HHHHHHTTCC-GGGEEEEECSCSSHHH--HTTHHHHHHHH-CCC
T ss_pred CCceEEEEEeCCcEEEEECCCcccHH----HH----HHHHHHcCCC-HHHCcEEEcCCCCccc--cCCHHHHHhhc-CCE
Confidence 35899999999999999995421111 00 0111111111 1158999999999999 78999988764 789
Q ss_pred EEEcCChHHHHhhc-----------------CCceEEeCCCceEEecccCCCcEEEE--EeecCCcCCCCCCCccEEEEE
Q 021237 164 VIATPNAKTLLDPL-----------------FQNVTYVEPGQSSEIEGRNGSKLRVK--ATAGPVLGPPWQRPENGYLVN 224 (315)
Q Consensus 164 v~~~p~~~~~l~~~-----------------~~~i~~l~~~~~~~l~~~~g~~l~i~--~~p~~~~g~~~~~~~~g~~i~ 224 (315)
+|+++.....+++. ......++.+++++++ +.+|+ .+|+|.. ...+|.+.
T Consensus 124 v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~v~~~~~pgHt~------g~~~~~~~ 192 (303)
T 4ax1_B 124 VYARAPAIDTLKRGLPDRTDPNFEVAEPVAPVANIVTLADDGVVSVG-----PLALTAVASPGHTP------GGTSWTWR 192 (303)
T ss_dssp EEEEHHHHHHHHHTSCCTTSTTGGGCCCCCCCSCEEEECTTCEEEET-----TEEEEEEECCSSST------TCEEEEEE
T ss_pred EEEcHHHHHHHhccccCccccccccccCcCCCCCcEEeCCCCEEEEC-----CeEEEEEeCCCCCc------cceEEEEE
Confidence 99988877766543 1246788999999997 55554 4555322 24566665
Q ss_pred ecCCc--eeEEEcCCCCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHcCCCEEEEeecccccc
Q 021237 225 SSQGQ--LTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDS 296 (315)
Q Consensus 225 ~~~~~--~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l~~k~~ip~H~g~f~~ 296 (315)
..... ..+++ ||+.+...... . .++. +...+ ..-+...++++.++.+++++++|.|.+.++.
T Consensus 193 ~~~~~~~~~~l~-gD~l~~~~~~~---~---~~~~-~~~~~--~~~~~~~~sl~~l~~l~~~~vv~~Hg~~~~~ 256 (303)
T 4ax1_B 193 SCEGDDCRQMVY-ADSLTAISDDV---F---RYSD-DAAHP--GYLAAFRNTLARVAALDCDILVTPHPSASGL 256 (303)
T ss_dssp EEETTEEEEEEE-CCCCCCCCCSS---C---CTTC-GGGST--THHHHHHHHHHHHHTSCCSEEECSSGGGGTG
T ss_pred ecCCCceeEEEE-eCCccccCcCc---c---cCCC-CCCCc--cHHHHHHHHHHHHhcCCCCEEEcCCcchhhH
Confidence 43211 14555 89876332100 0 0010 00000 0112457788889999999999999998874
No 24
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=99.54 E-value=4.6e-15 Score=133.57 Aligned_cols=191 Identities=14% Similarity=0.228 Sum_probs=117.0
Q ss_pred eEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCceEEE
Q 021237 87 NSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKVIA 166 (315)
Q Consensus 87 ss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~~v~~ 166 (315)
|||+|+. +..+||||..+ .. ..-+ .+.+..+ . +..+||+|++||.|+|| .+++..|.+++|++++++
T Consensus 44 N~yli~~-~~~iLID~G~~---~~-~~~~----~~~l~~~-~-~~~~i~~IilTH~H~DH--~gg~~~l~~~~~~~~v~~ 110 (262)
T 3hnn_A 44 NSYVIEG-DKTAIIDPPVE---SF-MKIY----LEALQQT-V-NLKKLDYVILGHFSPNR--IPTFKALLELAPQITFVC 110 (262)
T ss_dssp EEEEEES-SSEEEECCCCH---HH-HHHH----HHHHHHH-S-CGGGEEEEECSSCCGGG--HHHHHHHHHHCTTCEEEE
T ss_pred EEEEEEC-CCEEEEECCCc---ch-HHHH----HHHHHHh-C-ChhhCCEEEECCCCcch--hchHHHHHHHCCCCEEEE
Confidence 7999997 78999999432 10 0000 0111111 1 22378999999999999 799999998888999999
Q ss_pred cCChHHHHhhcC----CceEEeCCCceEEecccCCCcEEEEEeecCCcCCCCCCCccEEEEEecCCceeEEEcCCCCCcc
Q 021237 167 TPNAKTLLDPLF----QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQ 242 (315)
Q Consensus 167 ~p~~~~~l~~~~----~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~ 242 (315)
++.....++... .++..++.++++++++ +..+++..+|+.|+ ..++++..++ .+++|+||+ +..
T Consensus 111 ~~~~~~~l~~~~~~~~~~~~~~~~g~~l~lg~--~~~~~~i~tpg~Ht-------~g~~~~~~~~--~~~lfsGD~-~~~ 178 (262)
T 3hnn_A 111 SLPAAGDLRAAFPDDNLNILPMRGKETLDLGK--GHVLKFLPIPSPRW-------PAGLCTYDVQ--TQILYTDKI-FGA 178 (262)
T ss_dssp CHHHHHHHHHHSSSSCCEEEECCSSCEEECST--TCEEEEEECCCSSC-------TTCEEEEETT--TTEEEEETT-TCC
T ss_pred CHHHHHHHHHHhCCCCCceEEeCCCCEEEcCC--CcEEEEEECCCCCC-------CCeeEEEeCC--CCEEEEeec-Ccc
Confidence 988877665442 4678899999999840 12366666776222 1234444433 379999999 322
Q ss_pred ccccccCCcEEEeccCCCcCCC---c------cccCCHHHHHHHHHHcCCCEEEEeeccccccc--chhHHHHhh
Q 021237 243 NFLEKERSDIIITPVIKQLLPK---F------TLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSK--GFLASIIQS 306 (315)
Q Consensus 243 ~~~~~~~~Dl~i~~~~g~~~p~---~------~~h~~~eea~~~~~~l~~k~~ip~H~g~f~~~--~~~~~~~~~ 306 (315)
.... -.+.--+. +.+.+. + .......++++.+++++++.++|.|...++.. ..++.+.++
T Consensus 179 ~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~L~~~~i~PgHG~~~~~~~~~~~~~y~~w 249 (262)
T 3hnn_A 179 HICG---DDVFDDNW-ESFKEDQRYYFNCLMAPHAIHVEAALEKISDLQVRLYAVGHGPLVRTSLIALTQAYADW 249 (262)
T ss_dssp CCCC---SCCEESCG-GGTHHHHHHHHHHHTGGGHHHHHHHHHHHTTSCCSEEEESSSSEESTTHHHHHHHHHHH
T ss_pred ccCc---hhcccccH-HHHHHHHHHHHHHHhhhhHHHHHHHHHHHhCCCCCEEECCCCccccCCHHHHHHHHHHH
Confidence 2111 00111011 211110 0 00124577888888899999999999988642 344444433
No 25
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.53 E-value=2.1e-14 Score=146.49 Aligned_cols=185 Identities=16% Similarity=0.178 Sum_probs=116.6
Q ss_pred eCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhC-----
Q 021237 85 EGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMS----- 159 (315)
Q Consensus 85 Ghss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~----- 159 (315)
|.|||||+.++.+|||||++... . ..+. .....+. +..++||+|||||.|.|| ++.+..|.+++
T Consensus 14 ~~n~~LIe~~~~~ILID~G~~~~-~--~~~~-----~~l~~L~-~~~~~IdaVlLTH~H~DH--iGgLp~L~~~~~~g~~ 82 (717)
T 2i7x_A 14 TTVGSVVRFDNVTLLIDPGWNPS-K--VSYE-----QCIKYWE-KVIPEIDVIILSQPTIEC--LGAHSLLYYNFTSHFI 82 (717)
T ss_dssp SCCCEEEEETTEEEEECCCCCTT-T--SCHH-----HHHHHHH-TTGGGCCEEECCCSSHHH--HTTHHHHHHHSHHHHH
T ss_pred CCCEEEEEECCeEEEEeCCCCcc-c--chhh-----hHHHHHH-hcCCCCCEEEECCCChHH--HCCHHHHHHhhhhccc
Confidence 46899999999999999955421 0 0000 0000010 112489999999999999 68888887543
Q ss_pred CCceEEEcCChHHH----Hhh----c-------------------CCceEEeCCCceEEecccCCCcEEEEEeecCCcCC
Q 021237 160 PNLKVIATPNAKTL----LDP----L-------------------FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGP 212 (315)
Q Consensus 160 p~~~v~~~p~~~~~----l~~----~-------------------~~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~ 212 (315)
.+++||+++..... +.. + ..++..+++++.+++.+ .+++++|+++++.|+ .
T Consensus 83 ~~~pIY~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~-~~ggi~V~~~~aGHs-~ 160 (717)
T 2i7x_A 83 SRIQVYATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRS-RYDGLTLLAYNAGVC-P 160 (717)
T ss_dssp HTCEEEEEHHHHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETT-TTTTEEEEEEECSSS-T
T ss_pred CCceEEecchhHHHHHHHHHHHHHhhccccccccccccHHHHHhhhhceEEecCCCEEEEee-cCCCEEEEEECCCCC-C
Confidence 26899998765432 211 0 01578899999999810 002899988866543 1
Q ss_pred CCCCCccEEEEEecCCceeEEEcCCCCCccc-------c--------ccccCCcEEEeccCCCcCCCccccCCH---HHH
Q 021237 213 PWQRPENGYLVNSSQGQLTLYYEPHCVYNQN-------F--------LEKERSDIIITPVIKQLLPKFTLVSGQ---EDA 274 (315)
Q Consensus 213 ~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~-------~--------~~~~~~Dl~i~~~~g~~~p~~~~h~~~---eea 274 (315)
..++|.|+.++ .+|+|+||+++... + ....++|++++++ . |... .|... ++.
T Consensus 161 ----Gs~~~~I~~~~--~~IvytGD~~~~~~~~l~~~~~L~~~g~~l~~l~~~D~LI~Es-T-y~~~--~h~~~~~~~~l 230 (717)
T 2i7x_A 161 ----GGSIWCISTYS--EKLVYAKRWNHTRDNILNAASILDATGKPLSTLMRPSAIITTL-D-RFGS--SQPFKKRSKIF 230 (717)
T ss_dssp ----TCEEEEEECSS--CEEEECSSCCSSCCSSCCCCTTBCTTSCBCSTTSSCSEEEECC-S-CCCC--SSCHHHHHHHH
T ss_pred ----CcEEEEEEeCC--CEEEEECCCCCCcccccCccccccccchhHHhccCCcEEEEcC-C-CCCC--CCCCHHHHHHH
Confidence 25789998754 49999999876432 1 2234899999986 2 3221 12222 222
Q ss_pred HHHHHH---cCCCEEEEeecc
Q 021237 275 VKLAKL---LHAKFIVPMKNG 292 (315)
Q Consensus 275 ~~~~~~---l~~k~~ip~H~g 292 (315)
.+.+.+ .+.+++||++..
T Consensus 231 ~~~i~~~l~~~G~VlIp~fa~ 251 (717)
T 2i7x_A 231 KDTLKKGLSSDGSVIIPVDMS 251 (717)
T ss_dssp HHHHHHHTSTTCEEEEEECTT
T ss_pred HHHHHHHHhCCCeEEEEeccc
Confidence 333333 478899999875
No 26
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=99.51 E-value=1.2e-14 Score=133.29 Aligned_cols=190 Identities=14% Similarity=0.130 Sum_probs=112.3
Q ss_pred CCceEEEEE-----eCeEEEEEe--CCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCC
Q 021237 76 TDVFKLTYL-----EGNSWLWDL--DGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCH 148 (315)
Q Consensus 76 ~~~~~itwl-----Ghss~lI~~--~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld 148 (315)
++.|.|..+ |++||+|.. ++..+||||++.-..... ........+....+....+ +|++||+||.|.||
T Consensus 2 pg~m~i~~~~~~~~~~~~yli~~~~~~~~ilID~g~~~~~~~~-~~~~~~~~~l~~~l~~~g~-~i~~Il~TH~H~DH-- 77 (298)
T 4efz_A 2 PGSMTVEGFFDPATCTISYLLFDSGSGECALIDSVLDYDPKSG-RTRTASADQLIARVAALGA-RVRWLLETHVHADH-- 77 (298)
T ss_dssp BCSCEEEEEECTTTCBEEEEEECTTTCEEEEESCCBEEETTTT-EEECHHHHHHHHHHHHHTC-EEEEEECSSCCSSS--
T ss_pred CCceEEEEEecCCcccEEEEEEECCCCeEEEEcCCCCcccccc-ccCcccHHHHHHHHHHCCC-cceEEEECCCchhh--
Confidence 466888777 789999986 677999999653100000 0000000000011111223 58999999999999
Q ss_pred hhcHHHhhhhCCCceEEEcCChHHHHhhc----C----------CceEEeCCCceEEecccCCCcEEEEEeecCCcCCCC
Q 021237 149 LKTLKPLSKMSPNLKVIATPNAKTLLDPL----F----------QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPW 214 (315)
Q Consensus 149 ~~tl~~l~~~~p~~~v~~~p~~~~~l~~~----~----------~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~~~ 214 (315)
++++..|.+++ ++++++++.....++.+ + .....+..++.++++ +..+++..+|+|..|
T Consensus 78 ~gg~~~l~~~~-~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g---~~~i~vi~tPGHT~g--- 150 (298)
T 4efz_A 78 LSAAPYLKTRV-GGEIAIGRHVTRVQDVFGKLFNAGPAFAHDGSQFDRLLDDGDTLALG---ALSIRAMHTPGHTPA--- 150 (298)
T ss_dssp BCCHHHHHHHH-CCEEEEETTHHHHHHHHHHHTTCCTTSCSSSTTSSEEECTTCEEEET---TEEEEEEECCSSSTT---
T ss_pred hhhHHHHHHHh-CCcEEEChhHHHHHHHHHHhcCCcccccccccCCCEEeCCCCEEEEC---CEEEEEEECCCCCcc---
Confidence 68999998876 78999988865544322 1 123678889999996 223555556664322
Q ss_pred CCCccEEEEEecCC----ceeEEEcCCCCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHcCCC-EEEEe
Q 021237 215 QRPENGYLVNSSQG----QLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAK-FIVPM 289 (315)
Q Consensus 215 ~~~~~g~~i~~~~~----~~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l~~k-~~ip~ 289 (315)
..+|++...++ +.+++|+||+.+....-- ...| .|... ....-++++.+..|.++ +++|.
T Consensus 151 ---~~~~~~~~~~~~~~~~~~~lftGD~l~~~~~g~-~r~d----------~~~~d-~~~~~~Sl~kl~~L~~~~~v~pg 215 (298)
T 4efz_A 151 ---CMTYVVTEAHAAHDARDAAAFVGDTLFMPDYGT-ARCD----------FPGGD-ARSLYRSIRKVLSLPPATRLYMC 215 (298)
T ss_dssp ---CEEEEEEETTCCGGGCBCEEECCSSBCCTTTCB-CCCC----------STTCC-HHHHHHHHHHHTTSCTTCEEECS
T ss_pred ---cEEEEECCCcccccCCceEEEEcCccccCCCCC-ccCC----------CCCCC-HHHHHHHHHHHhcCCCCEEEECC
Confidence 57888876431 112999999987543210 0111 01000 01234555566667777 79999
Q ss_pred ec
Q 021237 290 KN 291 (315)
Q Consensus 290 H~ 291 (315)
|.
T Consensus 216 Hg 217 (298)
T 4efz_A 216 HD 217 (298)
T ss_dssp BC
T ss_pred CC
Confidence 97
No 27
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.46 E-value=6.1e-13 Score=119.84 Aligned_cols=144 Identities=14% Similarity=0.134 Sum_probs=93.0
Q ss_pred EEEEEeCeEEEEEeCCcEEEEccccCCCCCC-CCCccc-----cCC-----c---cccC--CCCCCCCCCCCEEEEcCCC
Q 021237 80 KLTYLEGNSWLWDLDGVKVLVDPILVGNLDF-GIPWLF-----DAG-----K---KFLK--SFQLSDLPQVDCLLITQSL 143 (315)
Q Consensus 80 ~itwlGhss~lI~~~g~~ILiDP~~~g~~s~-p~~~~~-----~~~-----~---~~~~--~~~~~~lp~iD~VlISH~H 143 (315)
....++.+||+|+.++..|||||..+..... +..|-. ..+ . ..+. ++++ .+||+|+|||.|
T Consensus 37 ~~~~~~~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~i~~VilTH~H 113 (276)
T 2r2d_A 37 RLIDIPVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSP---DDISTVVLSHLH 113 (276)
T ss_dssp CEEEEEEEEEEEECSSCEEEECCCSCTTCSSTTCSSCHHHHHHSCBCCCTTCSHHHHHHHTTCCG---GGCSEEECSCCS
T ss_pred ceEEeeeEEEEEECCCCCEEEECCCCcccccccccccHhHHhhcCCCCChhhCHHHHHHHcCCCH---HHCCEEEecCcc
Confidence 3457788999999999999999965432200 000000 000 0 0011 1222 268999999999
Q ss_pred CCCCChhcHHHhhhhCCCceEEEcCChHHHHhhc---------------------CCceEEeC-CCceEEecccCCCcEE
Q 021237 144 DDHCHLKTLKPLSKMSPNLKVIATPNAKTLLDPL---------------------FQNVTYVE-PGQSSEIEGRNGSKLR 201 (315)
Q Consensus 144 ~DHld~~tl~~l~~~~p~~~v~~~p~~~~~l~~~---------------------~~~i~~l~-~~~~~~l~~~~g~~l~ 201 (315)
+|| ++++..+ +++++++++.....+... ..++..++ .++.++++ ++++
T Consensus 114 ~DH--~gg~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~----~~~~ 183 (276)
T 2r2d_A 114 NDH--AGCVEYF----GKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELA----PGVN 183 (276)
T ss_dssp TTT--STTGGGC----SSSEEEEEHHHHHHHHHHHHTTCCSSSSCHHHHHHHTTSCCCEEEECTTCCEEEEE----TTEE
T ss_pred ccc--CCChhhC----CCCEEEECHHHHHHHhccccccccccccchHHhhhhccccccceeccCCCceeEec----CCEE
Confidence 999 5777766 378999988765533210 13456677 47788885 3699
Q ss_pred EEEe-ecCCcCCCCCCCccEEEEEecCCceeEEEcCCCCCccc
Q 021237 202 VKAT-AGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQN 243 (315)
Q Consensus 202 i~~~-p~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~ 243 (315)
+..+ |+|..| ..++.++.++ +.+++|+||+.+...
T Consensus 184 v~~~~pgHt~g------~~~~~~~~~~-~~~vl~~GD~~~~~~ 219 (276)
T 2r2d_A 184 LLNFGTGHASG------MLGLAVRLEK-QPGFLLVSDACYTAT 219 (276)
T ss_dssp EEEEESSSSSS------EEEEEEECSS-SCEEEEEETTSCCHH
T ss_pred EEeCCCCCCce------eEEEEEEcCC-CceEEEEechhhhHH
Confidence 9999 975332 5788887643 148999999998764
No 28
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.46 E-value=2e-13 Score=123.83 Aligned_cols=184 Identities=10% Similarity=0.033 Sum_probs=113.2
Q ss_pred EEEEeCeEEEEEeCCcEEEEccccCCCCCCCCCc---cc-cCCcc---ccCCCCCCCCCCCCEEEEcCCCCCCCChhcHH
Q 021237 81 LTYLEGNSWLWDLDGVKVLVDPILVGNLDFGIPW---LF-DAGKK---FLKSFQLSDLPQVDCLLITQSLDDHCHLKTLK 153 (315)
Q Consensus 81 itwlGhss~lI~~~g~~ILiDP~~~g~~s~p~~~---~~-~~~~~---~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~ 153 (315)
-..++.|||+|+.++..|||||..+.... ...+ +. ....+ .+..... +..+||+|+|||.|.|| ++++.
T Consensus 43 ~~~~~~n~~lI~~~~~~iLID~G~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~g~-~~~~Id~IllTH~H~DH--igg~~ 118 (280)
T 3esh_A 43 QINLPTHPILIQTAQYNLIIDAGIGNGKL-SEKQLRNFGVDEESHIIADLANYNL-TPKDIDYVLMTHMHFDH--AAGLT 118 (280)
T ss_dssp EEEEECCCEEEECSSCEEESCCTTCSSCS-CHHHHHHTTCSSCCCHHHHHHTTTC-CTTSCCEEECSCCCHHH--HGGGS
T ss_pred eEEEeEEEEEEEECCEEEEEECCCCCccc-ccccccccCCcccchHHHHHHHcCC-CHHHCCEEEeCCCcccc--cCccc
Confidence 36889999999999999999995542110 0000 00 00001 0111111 12278999999999999 78888
Q ss_pred Hhhh--hCCCceEEEcCChHHHHhhcC----------------CceEEeCCCceEEecccCCCcEEEEEeecCCcCCCCC
Q 021237 154 PLSK--MSPNLKVIATPNAKTLLDPLF----------------QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQ 215 (315)
Q Consensus 154 ~l~~--~~p~~~v~~~p~~~~~l~~~~----------------~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~~~~ 215 (315)
.|.+ .+|++++|+++.....+.... .++..++.+ .++. .++++..+|+|..|
T Consensus 119 ~l~~~~~fp~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~----~gi~~~~~pGHt~g---- 188 (280)
T 3esh_A 119 DQAGHAIFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKH--FEPV----PGIKMQHSGGHSFG---- 188 (280)
T ss_dssp CTTSCCSSTTCEEEEEHHHHHHHHSCCTTGGGTSCGGGCCGGGGGEEEESSE--ECSS----TTEEEEECCSSSTT----
T ss_pred ccccccCCCCCEEEECHHHHHHhhCcccccccchhhhhhhhhhheEEEeCCC--CeEc----CCEEEEEcCCCCcc----
Confidence 8876 567899999887766543210 123344332 3343 36888888886433
Q ss_pred CCccEEEEEecCCceeEEEcCCCCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHc------CCCEEEEe
Q 021237 216 RPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL------HAKFIVPM 289 (315)
Q Consensus 216 ~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l------~~k~~ip~ 289 (315)
.+++.++.++ .+++|+||+.+..... .+|+. ....++++++.+..+++ ...+++|.
T Consensus 189 --~~~~~i~~~~--~~vlftGD~~~~~~~~---~~d~~-----------~~~d~d~~~~~~s~~~ll~~~~~~~~~v~pg 250 (280)
T 3esh_A 189 --HTIITIESQG--DKAVHMGDIFPTTAHK---NPLWV-----------TAYDDYPMQSIREKERMIPYFIQQQYWFLFY 250 (280)
T ss_dssp --CEEEEEEETT--EEEEECGGGSCSGGGC---STTCC-----------CTTCSCHHHHHHHHHHHHHHHHHTTCEEECS
T ss_pred --cEEEEEEECC--cEEEEEEccCCchhhc---CCCcc-----------ccccCCHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 4788888743 5899999998866431 11110 01134666665543222 56789999
Q ss_pred ecccccc
Q 021237 290 KNGDLDS 296 (315)
Q Consensus 290 H~g~f~~ 296 (315)
|......
T Consensus 251 H~~~~~~ 257 (280)
T 3esh_A 251 HDENYFA 257 (280)
T ss_dssp SCSSEEE
T ss_pred ccCCCce
Confidence 9987655
No 29
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=99.46 E-value=1.3e-13 Score=130.21 Aligned_cols=163 Identities=10% Similarity=0.113 Sum_probs=112.7
Q ss_pred EEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCceEEEcCCh
Q 021237 91 WDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKVIATPNA 170 (315)
Q Consensus 91 I~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~~v~~~p~~ 170 (315)
+..+|..|+||+.- ..++++||+|||||.|.|| ++++.. . .++++|+++.+
T Consensus 32 ~~~pG~~ilVD~f~-----------------------~~~~~~IdaI~lTH~H~DH--iggl~~---~-~~~pIy~s~~t 82 (367)
T 4b87_A 32 KKIPGTGFTVDAFQ-----------------------YGVVEGCTAYFLTHFHSDH--YAGLSK---H-FTFPVYCSEIT 82 (367)
T ss_dssp GBCTTSSEEESCCS-----------------------SSSCTTCCEEECCCCCHHH--HTTCST---T-CCSCEEECHHH
T ss_pred EEECCCeEEEeCCC-----------------------cCCccCCcEEEECcChHHH--hCCccc---c-cCCcEEECHHH
Confidence 34678889999821 1133578999999999999 566652 2 26889999988
Q ss_pred HHHHhhc-C---CceEEeCCCceEEecccCCCcEEEEEeecCCcCCCCCCCccEEEEEecCCceeEEEcCCCCCcccccc
Q 021237 171 KTLLDPL-F---QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLE 246 (315)
Q Consensus 171 ~~~l~~~-~---~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~ 246 (315)
.+.++.. . .++..+++++.++++ +++|+++++.|. + ..++|+++.++ +.+|+|+||+++.+....
T Consensus 83 ~~ll~~~l~~~~~~~~~l~~g~~~~ig-----~~~v~~~~agH~-~----gs~~~~i~~~~-g~~il~tGD~~~~~~~~~ 151 (367)
T 4b87_A 83 GNLLKNKLHVQEQYIHPLPLDTECIVN-----GVKVVLLDANHC-P----GAVMILFYLPN-GTVILHTGDFRADPSMER 151 (367)
T ss_dssp HHHHHHHSCCCGGGEEECCBTSCEEET-----TEEEEEEECSSS-T----TCEEEEEECTT-SCEEEECCSCCCCGGGGG
T ss_pred HHHHHHHhccccceEEEeCCCCEEEEC-----CEEEEEEeCCCc-C----CcEEEEEEcCC-CcEEEEecCcccCcccch
Confidence 8766543 2 367899999999997 899999987652 1 25789898643 357999999998876532
Q ss_pred --c--cCCcEEEeccCCCcCCCccccCCHHHHHH-----HHHHc--CCCEEEEeeccccccc
Q 021237 247 --K--ERSDIIITPVIKQLLPKFTLVSGQEDAVK-----LAKLL--HAKFIVPMKNGDLDSK 297 (315)
Q Consensus 247 --~--~~~Dl~i~~~~g~~~p~~~~h~~~eea~~-----~~~~l--~~k~~ip~H~g~f~~~ 297 (315)
. .++|++++++ .-..|.+ .|.+.+++.+ +.+.+ +++.+ ++.++|++.
T Consensus 152 ~~l~~~~~D~Li~Es-Ty~~~~~-~~ps~~~~~~~~~~~i~~~~~~~g~~~--v~~~a~~ig 209 (367)
T 4b87_A 152 SLLADQKVHMLYLDT-TYCSPEY-TFPSQQEVIRFAINTAFEAVTLNPHAL--VVCGTYSIG 209 (367)
T ss_dssp SGGGTSCCCEEEECC-TTCSTTC-CCCCHHHHHHHHHHHHHHHHHHCTTEE--EEEEESSSC
T ss_pred hhhccCCCCEEEEec-ccCCCCC-CCCCHHHHHHHHHHHHHHHHHhCCCeE--EEEccchhH
Confidence 2 3899999997 3333332 3566666665 33333 56654 446666654
No 30
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.46 E-value=3.8e-13 Score=120.13 Aligned_cols=163 Identities=17% Similarity=0.202 Sum_probs=104.8
Q ss_pred CeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCceEE
Q 021237 86 GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKVI 165 (315)
Q Consensus 86 hss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~~v~ 165 (315)
.+||+|+.++..|||||..+.. . .. +.. ..+||+|++||.|.|| .+++..+.+++ +++++
T Consensus 20 ~~~~li~~~~~~iLiD~G~~~~----~--------~~---l~~--~~~i~~vi~TH~H~DH--~gg~~~l~~~~-~~~i~ 79 (261)
T 3adr_A 20 ATVYVMCGEKLTVMIDAGVSNS----I--------AD---FSF--LDKLDYIVLTHLHIDH--IGLLPELLQVY-KAKVL 79 (261)
T ss_dssp SEEEEEECSSCEEEECCCCTTC----C--------CC---CTT--CSCCCEEECSCCSGGG--TTTHHHHHHHS-CCEEE
T ss_pred eEEEEEEcCCcEEEEeCCCCCC----h--------hh---cCC--CCCCcEEEECCCCccc--cCCHHHHHHHh-CCeEE
Confidence 3699998778899999943211 0 11 112 3478999999999999 58999888776 78999
Q ss_pred EcCChHHHHhh---------------------cC--------CceEEeCCCceEEecccCCCcEEEEEeecC-CcCCCCC
Q 021237 166 ATPNAKTLLDP---------------------LF--------QNVTYVEPGQSSEIEGRNGSKLRVKATAGP-VLGPPWQ 215 (315)
Q Consensus 166 ~~p~~~~~l~~---------------------~~--------~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~-~~g~~~~ 215 (315)
+++.....+.+ ++ .++..++.++.++++ +++|++++.. |+ +
T Consensus 80 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~~pGHt-~--- 150 (261)
T 3adr_A 80 VKSGFKKYLTSEDGLKKLNESAEKVLGDLYYVYGGLEKKLDQDKVIEVEGNEEFDLG-----GYRMRLIYTPGHA-R--- 150 (261)
T ss_dssp EETTCTHHHHSHHHHHHHHHHHHHHHTHHHHHHCCCCSCCCGGGEEEECSCCEEECS-----SSEEEEEECTTSC-T---
T ss_pred ECHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcccccCCCccceEecCCCCEEEEC-----CEEEEEEECCCCC-C---
Confidence 98876543321 11 135678889888886 5555554432 22 1
Q ss_pred CCccEEEEEecCCceeEEEcCCCCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHcCCCEEEEeeccccc
Q 021237 216 RPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLD 295 (315)
Q Consensus 216 ~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l~~k~~ip~H~g~f~ 295 (315)
...+|.+ . +++|+||+.+.... .. +.+. +.+... .....++++.+++++++.++|.|.+.+.
T Consensus 151 -~~~~~~~---~---~~lf~GD~~~~~~~------~~-~~~~---~~~~~~-~~~~~~sl~~l~~l~~~~v~~~H~~~~~ 212 (261)
T 3adr_A 151 -HHMSVLV---D---DFLFTGDSAGAYFN------GV-VIPT---TPPVID-YKMYMESLKRQIELKPKVVGFAHGGLVS 212 (261)
T ss_dssp -TCEEEEE---T---TEEEEETSSCEEET------TE-EECC---CCSCCC-HHHHHHHHHHHHHTCCSEEEETTTEEEC
T ss_pred -ccEEEEE---C---CEEEEcCccccccc------cc-ccCC---CCCCCC-HHHHHHHHHHHHcCCCCEEEeCCCCccC
Confidence 1345532 1 69999999875420 11 1111 111111 1234677888888999999999998775
No 31
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=99.45 E-value=4.4e-13 Score=116.68 Aligned_cols=173 Identities=14% Similarity=0.079 Sum_probs=110.8
Q ss_pred EEeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCc
Q 021237 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNL 162 (315)
Q Consensus 83 wlGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~ 162 (315)
.++.||++|+.++..|||||..+.... .+....+....-.+||+|++||.|.|| .+++..|.+. ++
T Consensus 28 ~~~~n~~li~~~~~~iLiD~G~~~~~~----------~~~~~~l~~~~~~~i~~ii~TH~H~DH--~gg~~~l~~~--~~ 93 (219)
T 3l6n_A 28 EYSANSMYLVTKKGVVLFDVPWEKVQY----------QSLMDTIKKRHNLPVVAVFATHSHDDR--AGDLSFFNNK--GI 93 (219)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSGGGH----------HHHHHHHHHHHSCCEEEEECSSSSTTT--TCCTHHHHHT--TC
T ss_pred cccceEEEEEeCCEEEEEeCCCChHHH----------HHHHHHHHHhcCCceeEEEecCCCccc--ccCHHHHHhC--CC
Confidence 345799999999999999994421110 011111110000378999999999999 5888888763 78
Q ss_pred eEEEcCChHHHHhhcC--CceEEeCCCceEEecccCCCcEEEEEe---ecCCcCCCCCCCccEEEEEecCCceeEEEcCC
Q 021237 163 KVIATPNAKTLLDPLF--QNVTYVEPGQSSEIEGRNGSKLRVKAT---AGPVLGPPWQRPENGYLVNSSQGQLTLYYEPH 237 (315)
Q Consensus 163 ~v~~~p~~~~~l~~~~--~~i~~l~~~~~~~l~~~~g~~l~i~~~---p~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGD 237 (315)
++|+++...+.+++.. .....++.++.++++ +++|+++ |+|..| ..++.+. + .+++|+||
T Consensus 94 ~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~~~pgHt~g------~~~~~~~--~--~~~lf~GD 158 (219)
T 3l6n_A 94 KTYATAKTNEFLKKDGKATSTEIIKTGKPYRIG-----GEEFVVDFLGEGHTAD------NVVVWFP--K--YNVLDGGC 158 (219)
T ss_dssp EEEECHHHHHHHHHTTCCCCSEECCTTSEEEET-----TEEEEEECCCCSSSSS------CCEEEET--T--TTEEEEET
T ss_pred EEEEcHHHHHHHHhcCCCCCcEecCCCCEEEEC-----CEEEEEEeCCCCCCCC------CEEEEEC--C--CCEEEECC
Confidence 9999888777776653 456788899999996 6677665 453222 3455553 2 37999999
Q ss_pred CCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHc--CCCEEEEeeccccccc
Q 021237 238 CVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--HAKFIVPMKNGDLDSK 297 (315)
Q Consensus 238 t~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l--~~k~~ip~H~g~f~~~ 297 (315)
+.+... ..++..++. + . .....++++.++.+ ..++++|.|....+.+
T Consensus 159 ~~~~~~-----~~~~~~~~~-~----~---~~~~~~sl~~l~~~~~~~~~v~pgHg~~~~~~ 207 (219)
T 3l6n_A 159 LVKSNS-----ATDLGYIKE-A----N---VEQWPKTINKLKAKYSKATLIIPGHDEWKGGG 207 (219)
T ss_dssp TSCCTT-----CSSCCCCTT-C----C---TTTHHHHHHHHHHHCTTCSEEEESBSCCTTSC
T ss_pred eeeccc-----cccccccCc-c----C---HHHHHHHHHHHHHhCCCCCEEECCCCCCCCHH
Confidence 886321 112111111 1 1 12456677777765 6799999999876543
No 32
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=99.45 E-value=7.7e-14 Score=126.99 Aligned_cols=173 Identities=15% Similarity=0.216 Sum_probs=109.6
Q ss_pred EEEeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhC--
Q 021237 82 TYLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMS-- 159 (315)
Q Consensus 82 twlGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~-- 159 (315)
++.|.|||+|+.++..|||||.+..... +. ......+..... +|++|++||.|.|| .+++..|.+++
T Consensus 28 ~~~~~n~~li~~~~~~ilID~G~~~~~~----~~----~~l~~~l~~~~~-~i~~Ii~TH~H~DH--~gg~~~l~~~~~~ 96 (289)
T 4ad9_A 28 TLQGTNTYLVGTGPRRILIDTGEPAIPE----YI----SCLKQALTEFNT-AIQEIVVTHWHRDH--SGGIGDICKSINN 96 (289)
T ss_dssp TBTCCEEEEECSSSSEEEECCCSTTCHH----HH----HHHHHHHHHTTC-CEEEEECSCSSHHH--HTTHHHHHHHSCC
T ss_pred cCCceEEEEEecCCceEEEeCCCCCChH----HH----HHHHHHHHHcCC-CceEEEEcCCCCcc--cccHHHHHHhhcc
Confidence 4668999999998899999994321100 00 000001111122 78999999999999 79999998875
Q ss_pred -CCceEEEcCChHH---HHhhcCCceEEeCCCceEEecccCCCcEEEEEeecCCcCCCCCCCccEEEEEecCCceeEEEc
Q 021237 160 -PNLKVIATPNAKT---LLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYE 235 (315)
Q Consensus 160 -p~~~v~~~p~~~~---~l~~~~~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~~~~~~~~g~~i~~~~~~~~i~~s 235 (315)
+.++++..+.... .+.....++..+..++.++++ +..+++..+|++.. ...+|.+. + .+++|+
T Consensus 97 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g---g~~~~~~~~pGHt~------~~~~~~~~--~--~~~lft 163 (289)
T 4ad9_A 97 DTTYCIKKLPRNPQREEIIGNGEQQYVYLKDGDVIKTE---GATLRVLYTPGHTD------DHMALLLE--E--ENAIFS 163 (289)
T ss_dssp SSCCCEEECCCSSCCCCCBTTTTBCEEECCTTCEEEET---TEEEEEEECCSSST------TCEEEEET--T--TTEEEE
T ss_pred CCCceEEecCCCcchhhhccCCCCceEEcCCCCEEEeC---CeEEEEEECCCCCC------CCEEEEEc--C--CCEEEE
Confidence 4678888765421 111112457889999999997 22344455565322 23555553 2 269999
Q ss_pred CCCCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHcCCCEEEEeecccccc
Q 021237 236 PHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDS 296 (315)
Q Consensus 236 GDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l~~k~~ip~H~g~f~~ 296 (315)
||+.+.... . +.... ....++++.++.+.++.++|.|...+..
T Consensus 164 GD~~~~~~~--------------~-~~~~~---~~~~~sl~~l~~l~~~~v~pgHg~~~~~ 206 (289)
T 4ad9_A 164 GDCILGEGT--------------T-VFEDL---YDYMNSLKELLKIKADIIYPGHGPVIHN 206 (289)
T ss_dssp ETSSCSSSC--------------C-CCSCH---HHHHHHHHHHHHHTCSEEEESSSSCBSC
T ss_pred ecccCCCCC--------------c-CcCCH---HHHHHHHHHHHcCCCCEEEeCCCChhcC
Confidence 998764321 0 00001 1235677788888999999999998764
No 33
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.45 E-value=8.2e-14 Score=125.03 Aligned_cols=180 Identities=15% Similarity=0.207 Sum_probs=111.3
Q ss_pred eCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCceE
Q 021237 85 EGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKV 164 (315)
Q Consensus 85 Ghss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~~v 164 (315)
+.+||+|+.++..|||||.... . ...+ ...+...... ..+|++|++||.|.|| ++++..|.++. +++|
T Consensus 24 ~~n~~li~~~~~~iLID~G~~~--~--~~~l----~~~l~~~g~~-~~~i~~IilTH~H~DH--~gg~~~l~~~~-~~~v 91 (263)
T 1k07_A 24 DLASYLIVTPRGNILINSDLEA--N--VPMI----KASIKKLGFK-FSDTKILLISHAHFDH--AAGSELIKQQT-KAKY 91 (263)
T ss_dssp SBCCEEEEETTEEEEECCCCGG--G--HHHH----HHHHHHTTCC-GGGEEEEECSSSSHHH--HTTHHHHHHHH-CCEE
T ss_pred CeEEEEEEeCCceEEEECCCcc--c--HHHH----HHHHHHcCCC-HHHCcEEEeCCCCccc--cccHHHHHHhc-CCEE
Confidence 4789999999999999994321 1 0000 0111111111 1268999999999999 68998887663 7899
Q ss_pred EEcCChHHHHhhc-------C----------CceEEeCCCceEEecccCCCcEEEEEeecCCcCCCCCCCccEEEEEecC
Q 021237 165 IATPNAKTLLDPL-------F----------QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQ 227 (315)
Q Consensus 165 ~~~p~~~~~l~~~-------~----------~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~~~~~~~~g~~i~~~~ 227 (315)
++++.....++.. + .....++.++.++++ +..+++..+|+|..| ..+|.+...+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g---~~~i~~i~~pGHt~g------~~~~~~~~~~ 162 (263)
T 1k07_A 92 MVMDEDVSVILSGGKSDFHYANDSSTYFTQSTVDKVLHDGERVELG---GTVLTAHLTPGHTRG------CTTWTMKLKD 162 (263)
T ss_dssp EEEHHHHHHHHTTTTTCTTTTTCGGGCCCCCCCSEEECTTCEEEET---TEEEEEEECCSSSTT------CEEEEEEEEE
T ss_pred EEcHHHHHHHhcccccccccCccccccCCCCCcceEeCCCCEEEEC---CeEEEEEECCCCCCC------cEEEEEeccc
Confidence 9988776655431 0 234678888888886 123555556664322 4677777531
Q ss_pred Cc--eeEEEcCCCCCccccccccCCcEEEeccCCC-cCCCccccCCHHHHHHHHHHcCCCEEEEeecccccccc
Q 021237 228 GQ--LTLYYEPHCVYNQNFLEKERSDIIITPVIKQ-LLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKG 298 (315)
Q Consensus 228 ~~--~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~-~~p~~~~h~~~eea~~~~~~l~~k~~ip~H~g~f~~~~ 298 (315)
.+ .+++|+||+++.....- .+. ..+. . -....++++.++.+.++.++|.|...++...
T Consensus 163 ~~~~~~~lf~GD~~~~~~~~~-----------~~~~~~~~-~-~~~~~~sl~~l~~l~~~~i~pgHg~~~~~~~ 223 (263)
T 1k07_A 163 HGKQYQAVIIGSIGVNPGYKL-----------VDNITYPK-I-AEDYKHSIKVLESMRCDIFLGSHAGMFDLKN 223 (263)
T ss_dssp TTEEEEEEEECCCCCCTTCCC-----------SSCSSCTT-H-HHHHHHHHHHHHTBCCSEEEESBHHHHTHHH
T ss_pred CCceeEEEEECCcccCCCccc-----------cCCCcCcc-c-HHHHHHHHHHHHccCCCEEEcCCCcccchHH
Confidence 12 27999999876322100 010 0000 0 0123567777888899999999998776543
No 34
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=99.44 E-value=3.7e-13 Score=117.79 Aligned_cols=170 Identities=15% Similarity=0.057 Sum_probs=107.6
Q ss_pred EEeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCC-CCCCCCEEEEcCCCCCCCChhcHHHhhhhCCC
Q 021237 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLS-DLPQVDCLLITQSLDDHCHLKTLKPLSKMSPN 161 (315)
Q Consensus 83 wlGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~-~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~ 161 (315)
+++.|||+|+.++..+||||..+.... ++....+... . .+||+|++||.|.|| ++++..+.+ ++
T Consensus 24 ~~~~n~~li~~~~~~iLiD~G~~~~~~----------~~~~~~l~~~~g-~~i~~vi~TH~H~DH--~gg~~~~~~--~~ 88 (223)
T 1m2x_A 24 KYAANAVYLVTDKGVVVIDCPWGEDKF----------KSFTDEIYKKHG-KKVIMNIATHSHDDR--AGGLEYFGK--IG 88 (223)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSGGGH----------HHHHHHHHHHHC-CCEEEEECSSSSTTT--TTTHHHHHH--TT
T ss_pred cccccEEEEEeCCEEEEEeCCCChhHH----------HHHHHHHHHHhC-CCeEEEEeccCCccc--cCchhhHhh--CC
Confidence 567899999999999999994421110 0000111100 1 278999999999999 588888876 47
Q ss_pred ceEEEcCChHHHHhhcC--CceEEeCCCceEEecccCCCcEEEEEe---ecCCcCCCCCCCccEEEEEecCCceeEEEcC
Q 021237 162 LKVIATPNAKTLLDPLF--QNVTYVEPGQSSEIEGRNGSKLRVKAT---AGPVLGPPWQRPENGYLVNSSQGQLTLYYEP 236 (315)
Q Consensus 162 ~~v~~~p~~~~~l~~~~--~~i~~l~~~~~~~l~~~~g~~l~i~~~---p~~~~g~~~~~~~~g~~i~~~~~~~~i~~sG 236 (315)
+++++++...+.+++.. .....++.++.++++ +.+++++ |++..| ..++.+. + .+++|+|
T Consensus 89 ~~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~~~pgHt~~------~~~~~~~--~--~~~lf~G 153 (223)
T 1m2x_A 89 AKTYSTKMTDSILAKENKPRAQYTFDNNKSFKVG-----KSEFQVYYPGKGHTAD------NVVVWFP--K--EKVLVGG 153 (223)
T ss_dssp CEEEEEHHHHHHHHHTTCCCCSEEESSCEEEEET-----TEEEEEECCCSSSSSS------CCEEEET--T--TTEEEEE
T ss_pred CeEEEcHHHHHHHHhcCccCCceecCCCceEEEC-----CEEEEEEecCCCCCCC------CEEEEEC--C--CCEEEEe
Confidence 89999888777776543 234678888888886 5666554 453222 3455553 2 3799999
Q ss_pred CCCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHc--CCCEEEEeeccccc
Q 021237 237 HCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--HAKFIVPMKNGDLD 295 (315)
Q Consensus 237 Dt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l--~~k~~ip~H~g~f~ 295 (315)
|..+... ..++..+ +... .....++++.++++ +.+.++|.|...+.
T Consensus 154 D~~~~~~-----~~~~~~~-------~~~~-~~~~~~sl~~l~~~~~~~~~i~pgHg~~~~ 201 (223)
T 1m2x_A 154 CIIKSAD-----SKDLGYI-------GEAY-VNDWTQSVHNIQQKFSGAQYVVAGHDDWKD 201 (223)
T ss_dssp TTSCCTT-----CSSCCCC-------TTCC-HHHHHHHHHHHHHHTTTCSEEEESBSCCCS
T ss_pred cccccCc-----ccccccC-------CCCC-HHHHHHHHHHHHHhCCCCCEEEeCCCCcCC
Confidence 9765431 1111111 1111 01234566666666 78999999998883
No 35
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.43 E-value=3.9e-13 Score=127.77 Aligned_cols=194 Identities=16% Similarity=0.144 Sum_probs=113.1
Q ss_pred CeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCC--CCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCce
Q 021237 86 GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLS--DLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLK 163 (315)
Q Consensus 86 hss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~--~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~~ 163 (315)
.|||+|+.++..+||||+...... .+ ...+... .. +..+||+|++||.|.|| .+++..|.+++|+++
T Consensus 35 ~n~~li~~~~~~iLiD~g~~~~~~----~~----~~~l~~~-~~~~~~~~i~~ii~TH~H~DH--~gg~~~l~~~~p~~~ 103 (404)
T 2ohh_A 35 YNAYLVCGDEGVALIDNSYPGTFD----EL----MARVEDA-LQQVGMERVDYIIQNHVEKDH--SGVLVELHRRFPEAP 103 (404)
T ss_dssp ECCEEEECSSCEEEECCCCTTCHH----HH----HHHHHHH-HHHHTCCCCCEEECSCCSHHH--HTTHHHHHHHSTTCC
T ss_pred EEEEEEEeCCcEEEEeCCCCccHH----HH----HHHHHHH-hccCCccCCCEEEeCCCCCcc--cchHHHHHHHCCCCE
Confidence 379999988889999994421110 01 0111111 10 22478999999999999 689999988878899
Q ss_pred EEEcCChHHHHhhcC-----CceEEeCCCceEEecccCCCcEEEEEee-cCCcCCCCCCCccEEEEEecCCceeEEEcCC
Q 021237 164 VIATPNAKTLLDPLF-----QNVTYVEPGQSSEIEGRNGSKLRVKATA-GPVLGPPWQRPENGYLVNSSQGQLTLYYEPH 237 (315)
Q Consensus 164 v~~~p~~~~~l~~~~-----~~i~~l~~~~~~~l~~~~g~~l~i~~~p-~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGD 237 (315)
+++++...+.+++.. .++..++.+++++++ +..+++..+| +|..| ..++.+.. .+++|+||
T Consensus 104 v~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g---~~~i~~~~~p~gH~~~------~~~~~~~~----~~~lf~GD 170 (404)
T 2ohh_A 104 IYCTEVAVKGLLKHYPSLREAEFMTVKTGDVLDLG---GKTLTFLETPLLHWPD------SMFTLLDE----DGILFSND 170 (404)
T ss_dssp EEECHHHHHHHHHHCGGGGGSCEEECCTTCEEECS---SCEEEEEECTTSSSTT------CEEEEEET----TTEEECTT
T ss_pred EEECHHHHHHHHHHhcccccCCceEcCCCCEEEEC---CEEEEEEeCCCCCCCC------ceEEEECC----CcEEEecC
Confidence 999888777665431 357889999999986 2235555555 43221 34555532 37999999
Q ss_pred CCCccccccccCCcE------EEeccCCCcCCCc--cccCCHHHHHHHHHHcCC----CEEEEeecccccc-cchhHHHH
Q 021237 238 CVYNQNFLEKERSDI------IITPVIKQLLPKF--TLVSGQEDAVKLAKLLHA----KFIVPMKNGDLDS-KGFLASII 304 (315)
Q Consensus 238 t~~~~~~~~~~~~Dl------~i~~~~g~~~p~~--~~h~~~eea~~~~~~l~~----k~~ip~H~g~f~~-~~~~~~~~ 304 (315)
+..... ...+.++- .+.+. ..|+... .......++++.++++.+ ++++|.|...++. ...++..+
T Consensus 171 ~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~sl~~l~~l~~~~~~~~i~pgHg~~~~~~~~~~~~~~ 248 (404)
T 2ohh_A 171 AFGQHL-CCPQRLDREIPEYILMDAA-RKFYANLITPLSKLVLKKFDEVKELGLLERIQMIAPSHGQIWTDPMKIIEAYT 248 (404)
T ss_dssp TTCCCC-CCSCCBGGGSCHHHHHHHH-HHHHHHHTGGGHHHHHHHHHHHHHTTCGGGCSEEECSSSCBBSSHHHHHHHHH
T ss_pred ccccCc-CcccccccccchHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCccccEEecCCCccccCHHHHHHHHH
Confidence 863110 00000000 00000 0000000 000012567888888888 8999999887763 23344444
Q ss_pred h
Q 021237 305 Q 305 (315)
Q Consensus 305 ~ 305 (315)
+
T Consensus 249 ~ 249 (404)
T 2ohh_A 249 G 249 (404)
T ss_dssp H
T ss_pred H
Confidence 3
No 36
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.43 E-value=1.2e-13 Score=119.61 Aligned_cols=166 Identities=20% Similarity=0.209 Sum_probs=102.4
Q ss_pred EeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCce
Q 021237 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLK 163 (315)
Q Consensus 84 lGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~~ 163 (315)
++.|||+|+.++..+|||| |... ..+ ...+... .+ +|++|++||.|.|| ++++..+.+++ +++
T Consensus 11 ~~~n~~li~~~~~~iliD~---G~~~---~~l----~~~l~~~---g~-~i~~vilTH~H~DH--~gg~~~l~~~~-~~~ 73 (207)
T 2zwr_A 11 LQENAYLVETGEGPVLIDP---GDEP---EKL----LALFQTT---GL-IPLAILLTHAHFDH--VGAVAPLVEAL-DLP 73 (207)
T ss_dssp TTEEEEEEEETTEEEEECC---CSCH---HHH----HHHHHHH---TC-CCSCEECSCCCGGG--TTTHHHHHHHH-CCC
T ss_pred cccEEEEEEeCCcEEEEeC---CCCH---HHH----HHHHHHc---CC-cccEEEECCCChHH--HccHHHHHHHh-CCc
Confidence 4589999999999999999 4211 001 0111111 12 48999999999999 57888887765 689
Q ss_pred EEEcCChHHHHhhc-------CC-------ceEEeCCCceEEecccCCCcEEEEEeecCCcCCCCCCCccEEEEEecCCc
Q 021237 164 VIATPNAKTLLDPL-------FQ-------NVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQ 229 (315)
Q Consensus 164 v~~~p~~~~~l~~~-------~~-------~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~~~~~~~~g~~i~~~~~~ 229 (315)
+++++...+.+++. +. ....++.++.++ ++++..+|++..| ..++.+. +
T Consensus 74 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~i~-------~~~~~~~pGHt~g------~~~~~~~--~-- 136 (207)
T 2zwr_A 74 VYLHPLDLPLYEGADLAARAWGLAIPKPPLPVRPLEEGMRLF-------GFQVLHLPGHSPG------HVAFYDP--E-- 136 (207)
T ss_dssp EEECGGGHHHHHTHHHHHHHTTCCCCCCCSCCEECCTTCEET-------TEEEEECCSSSTT------CEEEEET--T--
T ss_pred EEECHHHHHHHhCchhhhhhcCCCCCcCCCCceEeCCCCEEE-------EEEEEeCCCCCCC------cEEEEEC--C--
Confidence 99988887765431 11 234455554332 5888888885332 3455553 2
Q ss_pred eeEEEcCCCCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHcCCC-EEEEeeccccccc
Q 021237 230 LTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAK-FIVPMKNGDLDSK 297 (315)
Q Consensus 230 ~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l~~k-~~ip~H~g~f~~~ 297 (315)
.+++|+||+.+.... +..| .+... .....++++.++++.++ +++|.|.......
T Consensus 137 ~~~lf~GD~~~~~~~---~~~~----------~~~~~-~~~~~~sl~~l~~l~~~~~i~pgHg~~~~~~ 191 (207)
T 2zwr_A 137 GAQVFSGDLLFRGSV---GRYD----------LPGAD-PKALFASLKRLLSLPPETRVHPGHGPGTTLG 191 (207)
T ss_dssp TTEEEEETSEETTEE---CCSS----------STTCC-HHHHHHHHHHHTTSCTTCEEEESBSCCEEHH
T ss_pred CCEEEEecccCCCCc---CCCC----------CCCCC-HHHHHHHHHHHhcCCCCCEEECCCCCCCcHH
Confidence 379999999765422 1111 01110 00124555556667777 6999999876543
No 37
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=99.41 E-value=3.1e-13 Score=124.35 Aligned_cols=176 Identities=16% Similarity=0.118 Sum_probs=108.0
Q ss_pred eCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccC--CCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCc
Q 021237 85 EGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLK--SFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNL 162 (315)
Q Consensus 85 Ghss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~--~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~ 162 (315)
+.|||+|+.++..+||||..+.... ...+ ...+. +++. .+|++|++||.|.|| ++++..|.++ ++
T Consensus 21 ~~n~~li~~~~~~ilID~G~~~~~~--~~~l----~~~l~~~g~~~---~~i~~Vi~TH~H~DH--~gg~~~l~~~--~~ 87 (317)
T 2zo4_A 21 TVNLYLLQGAGEVALVDTALGTRAA--RGAL----ELHLAELGLCF---QDVKTILLTHHHPDH--YGLSGFFEGL--GA 87 (317)
T ss_dssp EEEEEEEEETTEEEEECCCCSSHHH--HHHH----HHHHHHTTCCG---GGCCEEEESCCSHHH--HTTHHHHHHT--TC
T ss_pred cEEEEEEEcCCceEEEECCCCCHHH--HHHH----HHHHHHcCCCh---hhcCEEEEcCCCCcc--cccHHHHHhC--CC
Confidence 5689999998889999994431100 0000 01111 1222 268999999999999 7899988875 78
Q ss_pred eEEEcCChHHHHhh------------------cC-----------------------CceEEeCCCceEEecccCCCcEE
Q 021237 163 KVIATPNAKTLLDP------------------LF-----------------------QNVTYVEPGQSSEIEGRNGSKLR 201 (315)
Q Consensus 163 ~v~~~p~~~~~l~~------------------~~-----------------------~~i~~l~~~~~~~l~~~~g~~l~ 201 (315)
+|++++.....++. ++ .....++.++.++++ +..++
T Consensus 88 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g---g~~~~ 164 (317)
T 2zo4_A 88 RVFLHEEEFARGHRFWREPEAFAEASWRLFLDHGTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALEVA---GKRLR 164 (317)
T ss_dssp EEEEEGGGTTTHHHHHHCTTTSHHHHHHHHHHTTCCC-------CHHHHHHTTCCCCSSCEEECTTCEEEET---TEEEE
T ss_pred EEEEcHHHHHHHHhhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcccccccCCCCCCceEECCCCEEEeC---CceEE
Confidence 99998776443321 11 135678888888886 22456
Q ss_pred EEEeecCCcCCCCCCCccEEEEEecCCceeEEEcCCCCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHc
Q 021237 202 VKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL 281 (315)
Q Consensus 202 i~~~p~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l 281 (315)
+..+|+|..| ..++.+ ++ .+++|+||+.+....-.. ...+ +. .+. . -....++++.++.+
T Consensus 165 ~i~tpGHt~g------~~~~~~--~~--~~~lf~GD~~~~~~~~~~-----~~~~--~~-~~~-~-~~~~~~sl~~l~~l 224 (317)
T 2zo4_A 165 VLWTPGHADG------HAAFYL--EE--EGVLLAGDALLEKVSPNV-----GLWA--YT-REN-P-LKDFLRSLDRLADL 224 (317)
T ss_dssp EEECCSSSTT------CEEEEE--TT--TTEEEEETSCCSSSCCCC-----CCCT--TS-CSC-H-HHHHHHHHHHHHTS
T ss_pred EEECCCCCcc------cEEEEe--CC--CCEEEECCEecCCCCCCC-----cccC--CC-CCc-h-HHHHHHHHHHHhcC
Confidence 6666764322 345544 22 379999999875422110 0001 00 000 0 01235677788888
Q ss_pred CCCEEEEeecccccc
Q 021237 282 HAKFIVPMKNGDLDS 296 (315)
Q Consensus 282 ~~k~~ip~H~g~f~~ 296 (315)
++++++|.|...+..
T Consensus 225 ~~~~v~pgHg~~~~~ 239 (317)
T 2zo4_A 225 GARVAYAGHFGPIAD 239 (317)
T ss_dssp CCSEEEESSSSCBSC
T ss_pred CCCEEECCCCCccCC
Confidence 999999999998764
No 38
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.40 E-value=4.8e-13 Score=127.03 Aligned_cols=176 Identities=15% Similarity=0.105 Sum_probs=108.3
Q ss_pred eCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCceE
Q 021237 85 EGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKV 164 (315)
Q Consensus 85 Ghss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~~v 164 (315)
+.|||+|+ ++..+||||+.+ ... ..+ ...+..+ . +..+||+|+|||.|.|| .+++..|.+++|++++
T Consensus 34 ~~n~~li~-~~~~iliD~G~~---~~~-~~~----~~~l~~~-~-~~~~i~~iiiTH~H~DH--~gg~~~l~~~~~~~~v 100 (402)
T 1e5d_A 34 TYNAYLVE-DEKTTLFDTVKA---EYK-GEL----LCGIASV-I-DPKKIDYLVIQHLELDH--AGALPALIEACQPEKI 100 (402)
T ss_dssp EEEEEEEC-SSSCEEECCCCG---GGH-HHH----HHHHHTT-S-CGGGCCEEEECCCSHHH--HTTHHHHHHHHCCSEE
T ss_pred ceEEEEEE-CCCEEEEeCCCC---ccH-HHH----HHHHHHh-C-CcccCCEEEeCCCCccc--cccHHHHHHHCCCCEE
Confidence 45799999 678999999432 100 000 0111111 1 22378999999999999 6899999887778999
Q ss_pred EEcCChHHHHhhc-C---CceEEeCCCceEEecccCCCcEEEEEeecC--CcCCCCCCCccEEEEEecCCceeEEEcCCC
Q 021237 165 IATPNAKTLLDPL-F---QNVTYVEPGQSSEIEGRNGSKLRVKATAGP--VLGPPWQRPENGYLVNSSQGQLTLYYEPHC 238 (315)
Q Consensus 165 ~~~p~~~~~l~~~-~---~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~--~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt 238 (315)
++++.....+++. + .++..++.+++++++ +++++++++. |+. ...++.+ ++ .+++|+||+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~~~~~~~p~gH~~-----~~~~~~~--~~--~~~l~~GD~ 166 (402)
T 1e5d_A 101 FTSSLGQKAMESHFHYKDWPVQVVKHGETLSLG-----KRTVTFYETRMLHWP-----DSMVSWF--AD--EKVLISNDI 166 (402)
T ss_dssp EEEHHHHHHHHHHHCCSSCCEEEECTTCEEECS-----SCEEEEEECTTSSST-----TCEEEEE--TT--TTEEEEETT
T ss_pred EEChHHHHHHHHHhCCCCCceEEcCCCCEEEEC-----CCEEEEEeCCCCCCC-----CcEEEEE--CC--CCEEEeccc
Confidence 9998887766554 2 367889999999996 5555444432 221 1234433 32 389999999
Q ss_pred CCccccccccCCcEEEeccCCCcCC-Cc-------------cccCCHHHHHHHHHH--cCCCEEEEeeccccc
Q 021237 239 VYNQNFLEKERSDIIITPVIKQLLP-KF-------------TLVSGQEDAVKLAKL--LHAKFIVPMKNGDLD 295 (315)
Q Consensus 239 ~~~~~~~~~~~~Dl~i~~~~g~~~p-~~-------------~~h~~~eea~~~~~~--l~~k~~ip~H~g~f~ 295 (315)
.... +..|. +++. ...+ .+ .......++++.++. +++++++|.|...++
T Consensus 167 ~~~~-----~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~~i~p~Hg~~~~ 231 (402)
T 1e5d_A 167 FGQN-----IAASE-RFSD--QIPVHTLERAMREYYANIVNPYAPQTLKAIETLVGAGVAPEFICPDHGVIFR 231 (402)
T ss_dssp TCCC-----CCCSC-CBGG--GSCHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHTTCCCSEEEESSSCBEE
T ss_pred ccCc-----ccccc-cccc--ccchhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhCCCCcCEEecCCcceee
Confidence 5321 11110 1110 0000 00 000112577788888 899999999998887
No 39
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.39 E-value=5e-13 Score=122.40 Aligned_cols=176 Identities=17% Similarity=0.119 Sum_probs=107.7
Q ss_pred eCeEEEEE-eCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCce
Q 021237 85 EGNSWLWD-LDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLK 163 (315)
Q Consensus 85 Ghss~lI~-~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~~ 163 (315)
+.|||+|+ .++..+||||..+.... -+ .+.+..+ +++..+|++|++||.|.|| .+++..|.+++|+++
T Consensus 23 ~~n~~li~~~~~~~iLID~G~~~~~~----~~----~~~l~~~-~~~~~~i~~Ii~TH~H~DH--~gg~~~l~~~~~~a~ 91 (303)
T 2vw8_A 23 QVPVFLLRLGEASWALVEGGISRDAE----LV----WADLCRW-VADPSQVHYWLITHKHYDH--CGLLPYLCPRLPNVQ 91 (303)
T ss_dssp TSCEEEEEEETTEEEEECCCCGGGHH----HH----HHHHHHH-CSCGGGEEEEECCCCSTTT--TTTHHHHGGGCTTCE
T ss_pred CceEEEEEeCCCceEEEECCCCCcHH----HH----HHHHHHH-hcCcccceEEEeccCCccc--cCCHHHHHHhCCCCe
Confidence 37899994 88899999994321000 00 0111111 1122378999999999999 689999988888899
Q ss_pred EEEcCChHHHHhh-----------------cC----------CceEEeCCCceEEecccCC-CcEEEEEeecCCcCCCCC
Q 021237 164 VIATPNAKTLLDP-----------------LF----------QNVTYVEPGQSSEIEGRNG-SKLRVKATAGPVLGPPWQ 215 (315)
Q Consensus 164 v~~~p~~~~~l~~-----------------~~----------~~i~~l~~~~~~~l~~~~g-~~l~i~~~p~~~~g~~~~ 215 (315)
+++++...+.+++ ++ ..+..++.++.++++ + ..+++..+|+|..|
T Consensus 92 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lg---~g~~l~~i~~pGHt~g---- 164 (303)
T 2vw8_A 92 VLASERTCQAWKSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELG---PRHRLQVIEAHGHSDD---- 164 (303)
T ss_dssp EEEEHHHHHHTTCHHHHHHHHHHHHHTCCTTCCCCCCCCGGGSCEEEECTTCEEEEE---TTEEEEEEECTTSSTT----
T ss_pred EEECHHHHHHHhccchhhHHHHHHHHHHHhhcccccccCCCCCCceEcCCCCEEecC---CCeEEEEEECCCCCcc----
Confidence 9998776543321 10 234678888888886 1 12555666764222
Q ss_pred CCccEEEEEecCCceeEEEcCCCCCccccccccCCcEEEeccCCCcCCCccc-cCCHHHHHHHHHHcCCC-EEEEeeccc
Q 021237 216 RPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTL-VSGQEDAVKLAKLLHAK-FIVPMKNGD 293 (315)
Q Consensus 216 ~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~-h~~~eea~~~~~~l~~k-~~ip~H~g~ 293 (315)
..++.+. + .+++|+||+.+.... .. +...|.+.. -....++++.+++++++ +++|.|...
T Consensus 165 --~~~~~~~--~--~~~lf~GD~~~~~~~-~~-----------~~~~~~~~~d~~~~~~sl~~l~~l~~~~~v~pgHg~~ 226 (303)
T 2vw8_A 165 --HVVFYDV--R--RRRLFCGDALGEFDE-AE-----------GVWRPLVFDDMEAYLESLERLQRLPTLLQLIPGHGGL 226 (303)
T ss_dssp --CEEEEET--T--TTEEEEETTTCEECT-TT-----------CSEECCCSSCHHHHHHHHHHHHTSSCCSEEEESSSCE
T ss_pred --cEEEEEC--C--CCEEEEcCccCcccC-cc-----------cccCCCCCCCHHHHHHHHHHHhcCCCCeEEECCCCCc
Confidence 3555553 2 379999999642211 00 100111100 01234567777788999 999999987
Q ss_pred ccc
Q 021237 294 LDS 296 (315)
Q Consensus 294 f~~ 296 (315)
+..
T Consensus 227 ~~~ 229 (303)
T 2vw8_A 227 LRG 229 (303)
T ss_dssp EEH
T ss_pred cCc
Confidence 754
No 40
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.39 E-value=1.1e-13 Score=119.89 Aligned_cols=168 Identities=18% Similarity=0.241 Sum_probs=102.3
Q ss_pred EEEEEeCeEEEEEe--CCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhh
Q 021237 80 KLTYLEGNSWLWDL--DGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSK 157 (315)
Q Consensus 80 ~itwlGhss~lI~~--~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~ 157 (315)
.+.+++.|||+|+. ++..||||| |... ++....+....+ ++|+|++||.|+|| .+++..+.+
T Consensus 7 ~~~~~~~n~~li~~~~~~~~iLiD~---G~~~----------~~l~~~l~~~g~-~i~~ii~TH~H~DH--~gg~~~l~~ 70 (210)
T 2xf4_A 7 PVTAFSQNCSLIWCEQTRLAALVDP---GGDA----------EKIKQEVDASGV-TLMQILLTHGHLDH--VGAASELAQ 70 (210)
T ss_dssp EETTTTEEEEEEECTTTCEEEEECC---CSCH----------HHHHHHHHHHTC-EEEEEECSCSCHHH--HTTHHHHHH
T ss_pred eeCCcccEEEEEEecCCCcEEEEcC---CCCH----------HHHHHHHHHcCC-ceeEEEECCCChhh--hcCHHHHHH
Confidence 34566799999984 678999999 4211 010001111112 48999999999999 789988877
Q ss_pred hCCCceEEEcCChHHHHhh--------cC-------CceEEeCCCceEEecccCCCcEEEEE--eecCCcCCCCCCCccE
Q 021237 158 MSPNLKVIATPNAKTLLDP--------LF-------QNVTYVEPGQSSEIEGRNGSKLRVKA--TAGPVLGPPWQRPENG 220 (315)
Q Consensus 158 ~~p~~~v~~~p~~~~~l~~--------~~-------~~i~~l~~~~~~~l~~~~g~~l~i~~--~p~~~~g~~~~~~~~g 220 (315)
++ ++++++++.....+.+ ++ .....++.++.++++ +.+|++ +|++..| ..+
T Consensus 71 ~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~~pgHt~g------~~~ 138 (210)
T 2xf4_A 71 HY-GVPVIGPEKEDEFWLQGLPAQSRMFGLDECQPLTPDRWLNDGDRVSVG-----NVTLQVLHCPGHTPG------HVV 138 (210)
T ss_dssp HH-TCCEECCCGGGHHHHHTHHHHHHHTTCCCCCCCCCSBCCCTTCEEEET-----TEEEEEEECCSSSTT------CEE
T ss_pred Hc-CCcEEEecchHHHHhccchhhhhhcCCcccCCCCCceEECCCCEEEEC-----CeEEEEEECCCCCCC------cEE
Confidence 65 6889888776554322 12 123457788888886 555544 5553221 345
Q ss_pred EEEEecCCceeEEEcCCCCCccccccccCCcEEEeccCCCcCCCccccCCHH---HHH-HHHHHcCCC-EEEEeeccccc
Q 021237 221 YLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQE---DAV-KLAKLLHAK-FIVPMKNGDLD 295 (315)
Q Consensus 221 ~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~e---ea~-~~~~~l~~k-~~ip~H~g~f~ 295 (315)
+.+. + .+++|+||+.+.... +..| .|. .+.+ +++ +.++.+.++ +++|.|...+.
T Consensus 139 ~~~~--~--~~~lf~GD~~~~~~~---~~~~----------~~~----~~~~~~~~sl~~~l~~l~~~~~v~pgHg~~~~ 197 (210)
T 2xf4_A 139 FFDE--Q--SQLLISGDVIFKGGV---GRSD----------FPR----GDHTQLIDAIKRKLLPLGDDVTFIPGHGPLST 197 (210)
T ss_dssp EEET--T--TTEEEEETSEETTEE---CCCC----------STT----CCHHHHHHHHHHHTGGGCTTCEEEESSSCCEE
T ss_pred EEeC--C--CCEEEECCEeccCCc---CCCC----------CCC----CCHHHHHHHHHHHHhcCCCCeEEECCCCCccc
Confidence 5543 2 379999999765432 1111 111 1333 344 344566766 79999987665
Q ss_pred c
Q 021237 296 S 296 (315)
Q Consensus 296 ~ 296 (315)
.
T Consensus 198 ~ 198 (210)
T 2xf4_A 198 L 198 (210)
T ss_dssp H
T ss_pred H
Confidence 4
No 41
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.38 E-value=2.1e-13 Score=132.97 Aligned_cols=179 Identities=12% Similarity=0.172 Sum_probs=109.3
Q ss_pred ceEEEEE-----eCeEEEE--EeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChh
Q 021237 78 VFKLTYL-----EGNSWLW--DLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLK 150 (315)
Q Consensus 78 ~~~itwl-----Ghss~lI--~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~ 150 (315)
.|+|..+ +++||+| +.++..|||||.. .. .+....+....+ +|++||+||.|.|| ++
T Consensus 3 ~m~i~~~~~~~~~~n~yli~~~~~~~~ilID~g~---~~----------~~~~~~l~~~~~-~i~~Il~TH~H~DH--~g 66 (474)
T 3tp9_A 3 AMYLRRFYDEGLAHASYLVGCQETGEACVIDPAR---DV----------EPYLLTAKREGL-RIVAALETHIHADF--VS 66 (474)
T ss_dssp CEEEEEEEETTTTEEEEEEEETTTCEEEEESCCS---CC----------HHHHHHHHHHTC-EEEEEECSSCCSSS--CC
T ss_pred ceEEEEEecCCceeEEEEEEECCCCEEEEEcCCC---Ch----------HHHHHHHHHcCC-eeEEEEcCcCchhh--hC
Confidence 4666554 6899999 6788999999942 21 011111111122 68999999999999 58
Q ss_pred cHHHhhhhCCCceEEEcCChHHHHhhcC---CceEEeCCCceEEecccCCCcEEEEEeecCCcCCCCCCCccEEEEEecC
Q 021237 151 TLKPLSKMSPNLKVIATPNAKTLLDPLF---QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQ 227 (315)
Q Consensus 151 tl~~l~~~~p~~~v~~~p~~~~~l~~~~---~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~~~~~~~~g~~i~~~~ 227 (315)
++..|.+++ ++++++++.....+...+ .....+..++.++++ +..+++..+|+|..| ..+|.+...+
T Consensus 67 g~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g---~~~i~~i~tPGHt~g------~~~~~~~~~~ 136 (474)
T 3tp9_A 67 GAREMADRA-GAAICVSDEGPPEWKSEYVKAYPHRLLKDGDELHFG---NVRIVVMHTPGHTPE------HVSYLLYDGK 136 (474)
T ss_dssp CHHHHHHHH-CCEEEEECCSCGGGCCGGGGGSSEEEECTTCEEEET---TEEEEEEECCSSSSS------CEEEEEEETT
T ss_pred CHHHHHHHH-CCcEEEcCcchhhhcccccccccceECCCCCEEEEC---CEEEEEEECCCCCCC------CEEEEEecCC
Confidence 999998764 799999888765544321 234788899999996 223444556664322 5788887643
Q ss_pred C---ceeEEEcCCCCCccccccccCCcEEEeccCCCcCCCccc-----cCCHHHHHHHHHHcCCCE-EEEeec
Q 021237 228 G---QLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTL-----VSGQEDAVKLAKLLHAKF-IVPMKN 291 (315)
Q Consensus 228 ~---~~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~-----h~~~eea~~~~~~l~~k~-~ip~H~ 291 (315)
+ ..+++|+||+.+.... +..|+.- +. +.+.. .....++++.+..|..+. ++|.|.
T Consensus 137 ~~~~~~~~lftGD~lf~~~~---g~~dl~~----~~--~~~~~~~~~~~~~~~~sl~~l~~l~~~~~v~PgHg 200 (474)
T 3tp9_A 137 TSPDVPMALFSGDFVFVGDV---GRPDLLE----RV--AGESGSSEALARQMFRSLRKFEALPDHVQVLPAHG 200 (474)
T ss_dssp TEEEEEEEEEEETSEETTEE---CCSCHHH----HH--SCCTTHHHHHHHHHHHHHHHHHTSCTTCEEEESBC
T ss_pred CCCCCceEEEeCCccccCCC---CCCCCCc----cc--cCCCccchHHHHHHHHHHHHHhcCCCCcEEECCCC
Confidence 1 1279999999765432 1222110 00 00000 001344555566777775 669998
No 42
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=99.38 E-value=3.1e-13 Score=119.12 Aligned_cols=172 Identities=10% Similarity=0.062 Sum_probs=109.1
Q ss_pred EEeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCc
Q 021237 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNL 162 (315)
Q Consensus 83 wlGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~ 162 (315)
+++.+||+|+.++..|||||..+.... .+....+......+|++|++||.|.|| ++++..+.+ .++
T Consensus 34 ~~~~n~~li~~~~~~iLiD~G~~~~~~----------~~~~~~l~~~~~~~i~~ii~TH~H~DH--~gg~~~~~~--~~~ 99 (232)
T 1a7t_A 34 MVPSNGMIVINNHQAALLDTPINDAQT----------EMLVNWVTDSLHAKVTTFIPNHWHGDC--IGGLGYLQR--KGV 99 (232)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSHHHH----------HHHHHHHHHHHCCEEEEEECSSSSHHH--HTTHHHHHH--TTC
T ss_pred cccceEEEEEeCCEEEEEeCCCCHHHH----------HHHHHHHHHhcCCCeEEEEeCCCCccc--cCCHHHHHh--CCC
Confidence 345799999999999999994321000 000001100001278999999999999 688888876 378
Q ss_pred eEEEcCChHHHHhhcC--CceEEeCCCceEEecccCCCcEEEEEe---ecCCcCCCCCCCccEEEEEecCCceeEEEcCC
Q 021237 163 KVIATPNAKTLLDPLF--QNVTYVEPGQSSEIEGRNGSKLRVKAT---AGPVLGPPWQRPENGYLVNSSQGQLTLYYEPH 237 (315)
Q Consensus 163 ~v~~~p~~~~~l~~~~--~~i~~l~~~~~~~l~~~~g~~l~i~~~---p~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGD 237 (315)
++++++.....+++.+ .....++.++.++++ +.+++++ |+|..| ..++.+. + .+++|+||
T Consensus 100 ~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~~~pgHt~g------~~~~~~~--~--~~~lf~GD 164 (232)
T 1a7t_A 100 QSYANQMTIDLAKEKGLPVPEHGFTDSLTVSLD-----GMPLQCYYLGGGHATD------NIVVWLP--T--ENILFGGC 164 (232)
T ss_dssp EEEEEHHHHHHHHHHTCCCCSEEESSEEEEEET-----TEEEEEECCCCSSSTT------CCEEEET--T--TTEEEEET
T ss_pred eEEEcHHHHHHHHhcCCCCCceecCCCCEEEEC-----CeEEEEEeCCCCCCCC------CEEEEEC--C--CCEEEEcC
Confidence 9999888777776543 245667888888886 5566554 553222 3455553 2 37999999
Q ss_pred CCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHc--CCCEEEEeecccccc
Q 021237 238 CVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--HAKFIVPMKNGDLDS 296 (315)
Q Consensus 238 t~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l--~~k~~ip~H~g~f~~ 296 (315)
+.+...... .+.. +..+ .....++++.++.+ ++++++|.|...++.
T Consensus 165 ~~~~~~~~~-----------~~~~-~~~~-~~~~~~sl~~l~~~~~~~~~v~pgHg~~~~~ 212 (232)
T 1a7t_A 165 MLKDNQTTS-----------IGNI-SDAD-VTAWPKTLDKVKAKFPSARYVVPGHGNYGGT 212 (232)
T ss_dssp TSCCTTCCS-----------CCCC-TTCC-TTTHHHHHHHHHHHCTTCSEEEESSSCCBCT
T ss_pred cccccCCcc-----------cccC-CCCC-HHHHHHHHHHHHhhCCCCCEEECCCCCcccH
Confidence 987431100 0110 1111 12456778888877 889999999988753
No 43
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.38 E-value=8.1e-13 Score=123.00 Aligned_cols=176 Identities=19% Similarity=0.118 Sum_probs=105.7
Q ss_pred EEeCeEEEEEeCCcEEEEccccCCCCCCC-CCccccCCccccC--CCCCCCCCCCCEEEEcCCCCCCCChhcHHH-hhhh
Q 021237 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFG-IPWLFDAGKKFLK--SFQLSDLPQVDCLLITQSLDDHCHLKTLKP-LSKM 158 (315)
Q Consensus 83 wlGhss~lI~~~g~~ILiDP~~~g~~s~p-~~~~~~~~~~~~~--~~~~~~lp~iD~VlISH~H~DHld~~tl~~-l~~~ 158 (315)
.++.+||||+.++.+||||+..+.... + ...+ ...+. +++++ +||+|+|||.|+|| .+++.. +...
T Consensus 94 ~~~~n~~LI~~~~~~iLIDtG~~~~~~-~~~~~l----~~~L~~~Gi~~~---~Id~VilTH~H~DH--iggl~~~~~~~ 163 (331)
T 1p9e_A 94 ETSVTGYLVNTGSKLVLVDTGAAGLFG-PTLGRL----AANLKAAGYQPE---QVDEIYITHMHPDH--VGGLMVGEQLA 163 (331)
T ss_dssp EEEEEEEEEECSSCEEEECCCCTTSSC-TTCCCH----HHHHHHTTCCGG---GCCEEECSCCCHHH--HGGGEETTEES
T ss_pred EEEEEEEEEEECCEEEEEECCCCCcCC-cchhHH----HHHHHHcCCCHH---HCCEEEeCCccccc--CCccccccccc
Confidence 445679999999999999995432100 0 0000 01111 23222 68999999999999 577763 3334
Q ss_pred CCCceEEEcCChHHHHhhc---------------------------CCceEEeCCCceEEecccCCCcEEEEEeecCCcC
Q 021237 159 SPNLKVIATPNAKTLLDPL---------------------------FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLG 211 (315)
Q Consensus 159 ~p~~~v~~~p~~~~~l~~~---------------------------~~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g 211 (315)
++++++|+++...+++.+. ..++..++.++++. .++++..+|+|..|
T Consensus 164 fp~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~------~gi~vi~tpGHtpG 237 (331)
T 1p9e_A 164 FPNAVVRADQKEADFWLSQTNLDKAPDDESKGFFKGAMASLNPYVKAGKFKPFSGNTDLV------PGIKALASHGHTPG 237 (331)
T ss_dssp STTCEEECBHHHHHHHSCHHHHTTCSSTTSCHHHHHHHHHHHHHHHTTCBCCBCSSEECS------TTEEEEECTTSSTT
T ss_pred CCCCEEEECHHHHHHHhCchhhccCchhhhhHHHHHHHHHhhhhcccCceEEeCCCCEEc------ccEEEEEcCCCChh
Confidence 5789999877665533210 12334455554332 25888888886433
Q ss_pred CCCCCCccEEEEEecCCceeEEEcCCCCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHc------CCCE
Q 021237 212 PPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL------HAKF 285 (315)
Q Consensus 212 ~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l------~~k~ 285 (315)
..+|.++.++ .+++|+||+.+.... ....+|+. .....+++++++..+.+ +...
T Consensus 238 ------~~~~~i~~~~--~~vlf~GD~~~~~~~-~~~~p~~~-----------~~~d~d~~~~~~s~~~ll~~~~~~~~~ 297 (331)
T 1p9e_A 238 ------HTTYVVESQG--QKLALLGDLILVAAV-QFDDPSVT-----------TQLDSDSKSVAVERKKAFADAAKGGYL 297 (331)
T ss_dssp ------CEEEEEEETT--EEEEECTTSCCCHHH-HTTCTTCC-----------BTTCSSHHHHHHHHHHHHHHHHHHTCE
T ss_pred ------CEEEEEEECC--cEEEEEECccCcchh-cccCCCce-----------ecccCCHHHHHHHHHHHHHHHhcCCCE
Confidence 5788888743 589999999886532 11122210 01234676666655433 3578
Q ss_pred EEEeecccc
Q 021237 286 IVPMKNGDL 294 (315)
Q Consensus 286 ~ip~H~g~f 294 (315)
++|.|....
T Consensus 298 v~~~H~~~~ 306 (331)
T 1p9e_A 298 IAASHLSFP 306 (331)
T ss_dssp EECTTSSTT
T ss_pred EEEECCCCC
Confidence 999998543
No 44
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.38 E-value=6.4e-13 Score=119.55 Aligned_cols=176 Identities=14% Similarity=0.144 Sum_probs=105.9
Q ss_pred eCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccC--CCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCc
Q 021237 85 EGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLK--SFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNL 162 (315)
Q Consensus 85 Ghss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~--~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~ 162 (315)
+.+||+|+.++..|||||..+.... .+ ...+. +++.+ +||+|++||.|.|| ++++..|.+++ ++
T Consensus 37 ~~~~~li~~~~~~iLID~G~~~~~~----~l----~~~l~~~g~~~~---~i~~IilTH~H~DH--~gg~~~l~~~~-~~ 102 (269)
T 1sml_A 37 DLTALLVQTPDGAVLLDGGMPQMAS----HL----LDNMKARGVTPR---DLRLILLSHAHADH--AGPVAELKRRT-GA 102 (269)
T ss_dssp TBCCEEEEETTEEEEECCBSGGGHH----HH----HHHHHHTTCCGG---GEEEEECSCCSHHH--HTTHHHHHHHS-SC
T ss_pred CcEEEEEEeCCceEEEECCCCccHH----HH----HHHHHHcCCChH---HCcEEEeCCCCccc--cCCHHHHHHhc-CC
Confidence 3579999999999999994321000 00 01111 12221 68999999999999 78999998765 78
Q ss_pred eEEEcCChHHHHhhcC---------------CceEEeCCCceEEecccCCCcEEEEE--eecCCcCCCCCCCccEEEEEe
Q 021237 163 KVIATPNAKTLLDPLF---------------QNVTYVEPGQSSEIEGRNGSKLRVKA--TAGPVLGPPWQRPENGYLVNS 225 (315)
Q Consensus 163 ~v~~~p~~~~~l~~~~---------------~~i~~l~~~~~~~l~~~~g~~l~i~~--~p~~~~g~~~~~~~~g~~i~~ 225 (315)
++++++.....++... .....++.++.++++ +++|++ +|+|.. ...++.+..
T Consensus 103 ~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~~pGHt~------g~~~~~~~~ 171 (269)
T 1sml_A 103 KVAANAESAVLLARGGSDDLHFGDGITYPPANADRIVMDGEVITVG-----GIVFTAHFMAGHTP------GSTAWTWTD 171 (269)
T ss_dssp EEEECHHHHHHHHTTTCSBTTTBTSSCCCCCCCSEECCTTCEEEET-----TEEEEEEECCSSST------TCEEEEEEE
T ss_pred eEEECHHHHHHHhcCCccccccccccCCCCCCCCeEeCCCCEEEEC-----CEEEEEEECCCCCc------ccEEEEEec
Confidence 9999887766554320 123567888888886 555555 454322 246777764
Q ss_pred c-CCceeEEEcCCCCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHcCCCEEEEeeccccccc
Q 021237 226 S-QGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSK 297 (315)
Q Consensus 226 ~-~~~~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l~~k~~ip~H~g~f~~~ 297 (315)
. ++..+.++.||+.+...... . .. +.+ +. ......++++.++.+.++.++|.|.+..+..
T Consensus 172 ~~~~~~~~l~~gD~l~~~~~~~---~-----~~-~~~-~~--~~~~~~~sl~~l~~l~~~~l~~~H~~~~~~~ 232 (269)
T 1sml_A 172 TRNGKPVRIAYADSLSAPGYQL---Q-----GN-PRY-PH--LIEDYRRSFATVRALPCDVLLTPHPGASNWD 232 (269)
T ss_dssp EETTEEEEEEECCCCCCTTCCC---S-----SC-TTC-TT--HHHHHHHHHHHHHTSCCSEEECSSGGGGTCC
T ss_pred ccCCceeEEEEeccccCCCccc---c-----cC-CCC-Cc--CHHHHHHHHHHHHcCCCCEEEeCCCCccchh
Confidence 2 12112344489866332100 0 00 100 00 0012356777788889999999999876554
No 45
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.37 E-value=9.4e-13 Score=124.86 Aligned_cols=185 Identities=16% Similarity=0.119 Sum_probs=110.2
Q ss_pred CeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCceEE
Q 021237 86 GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKVI 165 (315)
Q Consensus 86 hss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~~v~ 165 (315)
.|||+|+. +..+||||+.+ .. ...+ ...+... + +..+||+|++||.|.|| .+++..|.+++|+++++
T Consensus 36 ~n~~li~~-~~~iliD~g~~---~~-~~~~----~~~l~~~-~-~~~~i~~iiiTH~H~DH--~gg~~~l~~~~~~~~v~ 102 (398)
T 1ycg_A 36 YNAYLIVD-DKTALVDTVYE---PF-KEEL----IAKLKQI-K-DPVKLDYLVVNHTESDH--AGAFPAIMELCPDAHVL 102 (398)
T ss_dssp ECCEEECS-SSCEEECCCCG---GG-HHHH----HHHHHHH-C-SSCCCSEEEESCCSHHH--HTTHHHHHHHCTTCEEE
T ss_pred EEEEEEEC-CCEEEEeCCCc---cc-HHHH----HHHHHHh-c-CcccCCEEEeCCCCcch--hhhHHHHHHHCCCCEEE
Confidence 57899985 56999999442 10 0000 0111111 1 12478999999999999 78999998888789999
Q ss_pred EcCChHHHHhhc-C---CceEEeCCCceEEecccCCCcEEEEE--ee-cCCcCCCCCCCccEEEEEecCCceeEEEcCCC
Q 021237 166 ATPNAKTLLDPL-F---QNVTYVEPGQSSEIEGRNGSKLRVKA--TA-GPVLGPPWQRPENGYLVNSSQGQLTLYYEPHC 238 (315)
Q Consensus 166 ~~p~~~~~l~~~-~---~~i~~l~~~~~~~l~~~~g~~l~i~~--~p-~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt 238 (315)
+++.....+++. + .++..++.++.++++ ++++++ +| +|..| ..++. .++ .+++|+||+
T Consensus 103 ~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~g-----~~~~~~~~~p~gH~~~------~~~~~--~~~--~~~lf~GD~ 167 (398)
T 1ycg_A 103 CTQRAFDSLKAHYSHIDFNYTIVKTGTSVSLG-----KRSLTFIEAPMLHWPD------SMFTY--VPE--EALLLPNDA 167 (398)
T ss_dssp ECHHHHHHHHHHTCSCCCEEEECCTTCEEECS-----SCEEEEEECTTSSSTT------CEEEE--ETT--TTEEEEETT
T ss_pred EcHHHHHHHHHHhCCCCcceEEeCCCCEEeeC-----CcEEEEEeCCCCCCCC------cEEEE--ECC--CcEEEeccc
Confidence 988877777654 2 357788999999996 555544 45 33211 23333 332 379999998
Q ss_pred CCccccccccCCcEEEecc----------CCCcCCC--ccccCCHHHHHHHHHH--cCCCEEEEeecccccc--cchhHH
Q 021237 239 VYNQNFLEKERSDIIITPV----------IKQLLPK--FTLVSGQEDAVKLAKL--LHAKFIVPMKNGDLDS--KGFLAS 302 (315)
Q Consensus 239 ~~~~~~~~~~~~Dl~i~~~----------~g~~~p~--~~~h~~~eea~~~~~~--l~~k~~ip~H~g~f~~--~~~~~~ 302 (315)
.... .. .+- +++. ...|+.. ........++++.+++ +.+++++|.|...++. ...++.
T Consensus 168 ~~~~-~~----~~~-~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~l~~l~~~~l~~~~i~p~Hg~~~~~~~~~~l~~ 241 (398)
T 1ycg_A 168 FGQH-IA----TSV-RFDDQVDAGLIMDEAAKYYANILMPFSNLITKKLDEIQKINLAIKTIAPSHGIIWRKDPGRIIEA 241 (398)
T ss_dssp TCCC-CC----CSC-CBGGGSCHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHTTCCCSEEEESSSCBBCSCHHHHHHH
T ss_pred cccc-cC----ccc-cccccccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhCCCCccEEECCCchhhhCCHHHHHHH
Confidence 4211 10 000 0000 0000000 0000012467888888 8999999999887752 245554
Q ss_pred HH
Q 021237 303 II 304 (315)
Q Consensus 303 ~~ 304 (315)
+.
T Consensus 242 ~~ 243 (398)
T 1ycg_A 242 YA 243 (398)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 46
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=99.37 E-value=1.4e-13 Score=120.37 Aligned_cols=177 Identities=14% Similarity=0.116 Sum_probs=107.0
Q ss_pred EEeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCc
Q 021237 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNL 162 (315)
Q Consensus 83 wlGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~ 162 (315)
|.+.|||+|+.++..|||||..+.... ..+ .+.+..+ ...+|++|++||.|.|| .+++..|.+ +++
T Consensus 20 ~~~~n~~li~~~~~~iLiD~G~~~~~~---~~~----~~~l~~~---~~~~i~~ii~TH~H~DH--~gg~~~l~~--~~~ 85 (227)
T 3iog_A 20 YVQENSMVYFGAKGVTVVGATWTPDTA---REL----HKLIKRV---SRKPVLEVINTNYHTDR--AGGNAYWKS--IGA 85 (227)
T ss_dssp SSCEEEEEEECSSCEEEESCCSSHHHH---HHH----HHHHHTT---CCSCEEEEECSSSSHHH--HTTHHHHHH--TTC
T ss_pred cccCcEEEEEeCCeEEEEECCCChHHH---HHH----HHHHHHh---cCCCeEEEEeCCCchhh--cChHHHHhh--CCC
Confidence 356799999998999999994321000 000 0111112 12378999999999999 789988876 589
Q ss_pred eEEEcCChHHHHhhc-----------C---C------ceEEeCCCceEEecccCCCcEEEEEe-ecCCcCCCCCCCccEE
Q 021237 163 KVIATPNAKTLLDPL-----------F---Q------NVTYVEPGQSSEIEGRNGSKLRVKAT-AGPVLGPPWQRPENGY 221 (315)
Q Consensus 163 ~v~~~p~~~~~l~~~-----------~---~------~i~~l~~~~~~~l~~~~g~~l~i~~~-p~~~~g~~~~~~~~g~ 221 (315)
++++++.....+++. . . ....++ + .++++ ++.+++..+ |+|..| ..++
T Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~l~---~~~~~~~~~~pGHt~g------~~~~ 154 (227)
T 3iog_A 86 KVVSTRQTRDLMKSDWAEIVAFTRKGLPEYPDLPLVLPNVVHD-G-DFTLQ---EGKVRAFYAGPAHTPD------GIFV 154 (227)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHHHCTTSCCCCCCCCSEEES-S-CEEET---TTTEEEECCCCSSSSS------CCEE
T ss_pred eEEECHHHHHHHHHhhHHHHHHhhcCCCCCCCccccCCCEeec-C-eEEEc---CcEEEEEecCCCCCCC------cEEE
Confidence 999988876554321 0 0 011222 2 36665 456888776 875433 3455
Q ss_pred EEEecCCceeEEEcCCCCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHH--HcCCCEEEEeecccccccch
Q 021237 222 LVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAK--LLHAKFIVPMKNGDLDSKGF 299 (315)
Q Consensus 222 ~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~--~l~~k~~ip~H~g~f~~~~~ 299 (315)
.+. + .+++| ||+.+.... +... ... .....++++.++ .+++++++|.|...+...+.
T Consensus 155 ~~~--~--~~~lf-gd~l~~~~~--------------~~~~-~~~-~~~~~~sl~~l~~~~l~~~~i~pgHg~~~~~~~~ 213 (227)
T 3iog_A 155 YFP--D--EQVLY-GGCILKEKL--------------GNLS-FAD-VKAYPQTLERLKAMKLPIKTVIGGHDSPLHGPEL 213 (227)
T ss_dssp EET--T--TTEEE-CGGGSCSSC--------------CCCT-TCC-TTHHHHHHHHHHHTCCCCSEEECSSSCCEECTHH
T ss_pred Eec--C--CCEEE-cccccccCC--------------CCcC-cCC-HHHHHHHHHHHHhccCCCCEEEeCCCCCcCCHHH
Confidence 443 2 26888 886554321 1100 000 113456677777 56899999999998877655
Q ss_pred hHHHHh
Q 021237 300 LASIIQ 305 (315)
Q Consensus 300 ~~~~~~ 305 (315)
++...+
T Consensus 214 i~~~~~ 219 (227)
T 3iog_A 214 IDHYEA 219 (227)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555443
No 47
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.37 E-value=3.2e-12 Score=122.39 Aligned_cols=194 Identities=16% Similarity=0.217 Sum_probs=116.8
Q ss_pred eEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhC-CCceEE
Q 021237 87 NSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMS-PNLKVI 165 (315)
Q Consensus 87 ss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~-p~~~v~ 165 (315)
|||||+.+++.+||||+ ...+.-.++ ..+..+ + +..+||+|++||.|.|| .+++..|.++. |+++++
T Consensus 53 NsYLI~~~~~~vLIDtg---~~~~~~~~l-----~~l~~~-i-~~~~IdyIi~TH~h~DH--~G~l~~l~~~~~~~~~v~ 120 (410)
T 4dik_A 53 NAYLVKLNGANVLIDGW---KGNYAKEFI-----DALSKI-V-DPKEITHIIVNHTEPDA--SGSLPATLKTIGHDVEII 120 (410)
T ss_dssp EEEEEECSSCEEEECCC---CGGGHHHHH-----HHHTTT-S-CGGGCCEEECSCCCHHH--HTTHHHHHHHHCSCCEEE
T ss_pred EEEEEEECCeEEEEeCC---CcchHHHHH-----HHHHHh-c-CcccCCEEEeCcCCcch--hhhHHHHHHHcCCCCEEE
Confidence 89999999999999994 222100011 111111 1 22379999999999999 78999887764 689999
Q ss_pred EcCChHHHHhhc--CCceEEeCCCceEEecccCCCcEEEEEeecCCcCCCCCCCccEEEEEecCCceeEEEcCCCCCccc
Q 021237 166 ATPNAKTLLDPL--FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQN 243 (315)
Q Consensus 166 ~~p~~~~~l~~~--~~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~ 243 (315)
+++.+...++.. ..++..++.|++++++ +..+++..+|+.|+. .+.++.. + +++|+||..-. +
T Consensus 121 ~s~~~~~~l~~~~~~~~~~~v~dGd~l~lG---~~~L~~i~tPg~H~p-------~~~~~y~-~---~iLFsgD~fg~-h 185 (410)
T 4dik_A 121 ASNFGKRLLEGFYGIKDVTVVKDGEEREIG---GKKFKFVMTPWLHWP-------DTMVTYL-D---GILFSCDVGGG-Y 185 (410)
T ss_dssp ECHHHHHHHHHHHCCCCEEECCTTCEEEET---TEEEEEEECTTSSST-------TCEEEEE-T---TEEEEETTTCC-S
T ss_pred eCHHHHHHHHhhcCccceeEecCCCEEeec---ceEEEEecCCCCCCC-------CCeeEEe-C---CceEccccccc-c
Confidence 998888777765 2567889999999997 334555556664432 1222223 2 58999997421 1
Q ss_pred cccccCC--cEEEec----cCCCcCCCcccc--CCHHHHHHHHHHcCCCEEEEeeccccccc--chhHHHHhhc
Q 021237 244 FLEKERS--DIIITP----VIKQLLPKFTLV--SGQEDAVKLAKLLHAKFIVPMKNGDLDSK--GFLASIIQSE 307 (315)
Q Consensus 244 ~~~~~~~--Dl~i~~----~~g~~~p~~~~h--~~~eea~~~~~~l~~k~~ip~H~g~f~~~--~~~~~~~~~~ 307 (315)
.....-+ +....+ -.-.|+....+. .....+++.+++|..+.++|.|...++.. ..++...+++
T Consensus 186 ~~~~~~~d~~~~~~e~~~~~~~~yy~~i~~p~~~~v~~~L~kl~~Ldi~~I~P~HGpi~r~~~~~ii~~Y~~w~ 259 (410)
T 4dik_A 186 LLPEILDDSNESVVERYLPHVTKYIVTVIGHYKNYILEGAEKLSSLKIKALLPGHGLIWKKDPQRLLNHYVSVA 259 (410)
T ss_dssp SCCSSSBTTCHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHTSCCSEEEESSSCBBSSCHHHHHHHHHHHH
T ss_pred ccCccccccchhhHHHHHHHHHHHHHhhccchHHHHHHHHHHHhCCCCCEEecCCcchhhcCHHHHHHHHHHhh
Confidence 1100000 000000 000000000000 11356788888999999999999988643 5666665553
No 48
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=99.36 E-value=1.5e-12 Score=116.21 Aligned_cols=163 Identities=20% Similarity=0.242 Sum_probs=101.1
Q ss_pred eCeEEEEEeC----CcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCC
Q 021237 85 EGNSWLWDLD----GVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSP 160 (315)
Q Consensus 85 Ghss~lI~~~----g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p 160 (315)
+++||||+.+ +..|||||..+. .. +....+....+ +|++||+||.|.|| ++++..|.++++
T Consensus 14 ~~~~yli~~~~~~~~~~ilID~g~~~-~~-----------~~~~~l~~~g~-~i~~Il~TH~H~DH--~gg~~~l~~~~~ 78 (245)
T 2gcu_A 14 STFTYLLADVSHPDKPALLIDPVDKT-VD-----------RDLKLIDELGL-KLIYAMNTHVHADH--VTGTGLLKTKLP 78 (245)
T ss_dssp TEEEEEEEETTSTTCEEEEESCBGGG-HH-----------HHHHHHHHHTC-EEEEEECSSCCSSS--CBSHHHHHHHST
T ss_pred ceEEEEEEcCCCCCCcEEEEeCCCch-HH-----------HHHHHHHHCCC-eeeEEEeCCCChhh--hhhHHHHHHhCC
Confidence 6889999984 689999995421 00 00001111122 58999999999999 589999987556
Q ss_pred CceEEEcCChHHHHhhcCCceEEeCCCceEEecccCCCcEEEEEeecCCcCCCCCCCccEEEEEecC--CceeEEEcCCC
Q 021237 161 NLKVIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQ--GQLTLYYEPHC 238 (315)
Q Consensus 161 ~~~v~~~p~~~~~l~~~~~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~~~~~~~~g~~i~~~~--~~~~i~~sGDt 238 (315)
++++++++.... .....+..++.++++ +..+++..+|++..| ..+|.+...+ .+.+++|+||+
T Consensus 79 ~~~v~~~~~~~~------~~~~~~~~g~~~~~g---~~~i~v~~tpGHt~g------~~~~~~~~~~~~~~~~~lftGD~ 143 (245)
T 2gcu_A 79 GVKSVISKASGS------KADLFLEPGDKVSIG---DIYLEVRATPGHTAG------CVTYVTGEGADQPQPRMAFTGDA 143 (245)
T ss_dssp TCEEEEEGGGCC------CCSEEECTTCEEEET---TEEEEEEECCSSSTT------CEEEEECCSTTSCSSCEEEEETT
T ss_pred CCeEEecccccc------cCCEEcCCCCEEEEC---CEEEEEEECCCCCCC------CEEEEECCccccccccEEEECCc
Confidence 899998765421 134567888899986 223444555664322 4677776531 02379999999
Q ss_pred CCccccccccCCcEEEeccCCCcCCCccccCCHHHHHH----HHHHcCCC-EEEEeecccc
Q 021237 239 VYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVK----LAKLLHAK-FIVPMKNGDL 294 (315)
Q Consensus 239 ~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~----~~~~l~~k-~~ip~H~g~f 294 (315)
.+.... +..|+ + .-++++..+ .++.+.++ +++|.|....
T Consensus 144 ~~~~~~---~~~d~---~-----------~~~~~~~~~sl~~~l~~l~~~~~v~pgHg~~~ 187 (245)
T 2gcu_A 144 VLIRGC---GRTDF---Q-----------EGSSDQLYESVHSQIFTLPKDTLIYPAHDYKG 187 (245)
T ss_dssp SBTTBC---CCCSS---T-----------TCCHHHHHHHHHHHTTTSCTTCEEEESBCSSS
T ss_pred cccCCc---cCCCC---C-----------CCCHHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 875422 11111 0 113444444 44456676 8999998743
No 49
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.36 E-value=3.2e-12 Score=126.73 Aligned_cols=198 Identities=12% Similarity=0.111 Sum_probs=118.3
Q ss_pred CCceEEEEEeC-----eEEEEEeCCcEEEEccccCCCCC---C-CCCcccc--------CCccccCCCCCCCCCCCCEEE
Q 021237 76 TDVFKLTYLEG-----NSWLWDLDGVKVLVDPILVGNLD---F-GIPWLFD--------AGKKFLKSFQLSDLPQVDCLL 138 (315)
Q Consensus 76 ~~~~~itwlGh-----ss~lI~~~g~~ILiDP~~~g~~s---~-p~~~~~~--------~~~~~~~~~~~~~lp~iD~Vl 138 (315)
.+.++|+++.. +|+||+.++.+|||||..+.... . ..+|... +.....+.+....+.+||+||
T Consensus 3 ~~~~~I~~ldvG~gqg~~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~~id~vi 82 (547)
T 2bib_A 3 SSGNKIHFINVQEGGSDAIILESNGHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSVQKLDFIL 82 (547)
T ss_dssp CSCEEEEEECBSSSBCCEEEEEETTEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTCCCBSCEE
T ss_pred CcCceEEEEEcCCCCceEEEEEeCCeEEEEeCCCCCcccccccccccccccccccccchhHHHHHHHHHhcCcccccEEE
Confidence 45678888843 79999999999999995431100 0 0011000 000011112223345799999
Q ss_pred EcCCCCCCCChhcHHHhhhhCCCceEEEcCChHHHH--------------------hhcCCceE--EeCCCceEEecccC
Q 021237 139 ITQSLDDHCHLKTLKPLSKMSPNLKVIATPNAKTLL--------------------DPLFQNVT--YVEPGQSSEIEGRN 196 (315)
Q Consensus 139 ISH~H~DHld~~tl~~l~~~~p~~~v~~~p~~~~~l--------------------~~~~~~i~--~l~~~~~~~l~~~~ 196 (315)
|||.|.|| ++++..|.++++..++++++.....+ +..+..+. .+..++.++++
T Consensus 83 lTH~H~DH--iggl~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~g--- 157 (547)
T 2bib_A 83 VTHTHSDH--IGNVDELLSTYPVDRVYLKKYSDSRITNSERLWDNLYGYDKVLQTATETGVSVIQNITQGDAHFQFG--- 157 (547)
T ss_dssp CCCSCHHH--HTTHHHHHHHSCBSEEECCCCCGGGBSCGGGCTTHHHHHHHHHHHHHHTTCEEECSCCTTTTEEEET---
T ss_pred EcCCCccc--cCCHHHHHHhCCccEEEECcccccccCChHHHHhHHHHHHHHHHHHHHhCCeEEEeecCCCceEecC---
Confidence 99999999 68999998876444577765433221 11122333 24566788886
Q ss_pred CCcEEEEEeecC---Cc-CC-----CCCCCccEEEEEecCCceeEEEcCCCCCccccc----c-ccCCcEEEeccCC-Cc
Q 021237 197 GSKLRVKATAGP---VL-GP-----PWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFL----E-KERSDIIITPVIK-QL 261 (315)
Q Consensus 197 g~~l~i~~~p~~---~~-g~-----~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~----~-~~~~Dl~i~~~~g-~~ 261 (315)
+++|++++.. |. +. .-....++++|+.++ .+++|+||+....... . ..++|+++++-.| ..
T Consensus 158 --~~~i~~l~~~~~~h~~~~~~~~~~~n~~S~vl~i~~~~--~~iLftGD~~~~~~~e~~l~~~~~~~DvLkv~HHG~S~ 233 (547)
T 2bib_A 158 --DMDIQLYNYENETDSSGELKKIWDDNSNSLISVVKVNG--KKIYLGGDLDNVHGAEDKYGPLIGKVDLMKFNHHHDTN 233 (547)
T ss_dssp --TEEEEEESCSCCBCTTSCBCCBSSGGGGCCEEEEEETT--EEEEECTTCCSTTSHHHHHHHHHCCCSEEECTTTTBCS
T ss_pred --CeeEEEecCccccCccccccccCCCCCCcEEEEEEECC--EEEEecCCccchhhhhhhhcccccceeEEEeccccCcc
Confidence 7888888631 21 10 001126788888743 6999999998753211 1 2489999987643 11
Q ss_pred CCCccccCCHHHHHHHHHHcCCCEEEEeec
Q 021237 262 LPKFTLVSGQEDAVKLAKLLHAKFIVPMKN 291 (315)
Q Consensus 262 ~p~~~~h~~~eea~~~~~~l~~k~~ip~H~ 291 (315)
. ..+.++++.++|+++|....
T Consensus 234 ~---------s~s~~fl~~v~P~~aiiS~g 254 (547)
T 2bib_A 234 K---------SNTKDFIKNLSPSLIVQTSD 254 (547)
T ss_dssp S---------SSCHHHHHHHCCSEEEESBS
T ss_pred c---------CChHHHHHhcCCcEEEEcCC
Confidence 0 12356777889998886654
No 50
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=99.35 E-value=3.3e-13 Score=118.41 Aligned_cols=172 Identities=14% Similarity=0.110 Sum_probs=106.9
Q ss_pred EEeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCc
Q 021237 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNL 162 (315)
Q Consensus 83 wlGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~ 162 (315)
.++.+||+|+.++..+||||..+.... ++....+......+|++|++||.|.|| ++++..+.++ ++
T Consensus 38 ~~~~n~~li~~~~~~iliD~G~~~~~~----------~~~~~~l~~~~~~~i~~ii~TH~H~DH--~gg~~~l~~~--~~ 103 (227)
T 1mqo_A 38 AVPSNGLVLNTSKGLVLVDSSWDDKLT----------KELIEMVEKKFQKRVTDVIITHAHADR--IGGIKTLKER--GI 103 (227)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSHHHH----------HHHHHHHHHHHTSCEEEEECCCCSHHH--HTTHHHHHHH--TC
T ss_pred eecceEEEEEeCCeEEEEECCCChHHH----------HHHHHHHHHhcCCCceEEEeCCCCchh--ccchHHHhhC--Cc
Confidence 346799999999999999994321000 000001100002378999999999999 6899988875 68
Q ss_pred eEEEcCChHHHHhhcC--CceEEeCCCceEEecccCCCcEEEEEe---ecCCcCCCCCCCccEEEEEecCCceeEEEcCC
Q 021237 163 KVIATPNAKTLLDPLF--QNVTYVEPGQSSEIEGRNGSKLRVKAT---AGPVLGPPWQRPENGYLVNSSQGQLTLYYEPH 237 (315)
Q Consensus 163 ~v~~~p~~~~~l~~~~--~~i~~l~~~~~~~l~~~~g~~l~i~~~---p~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGD 237 (315)
++++++.....++..+ ..+..+..++.++++ +++|+++ |+|..| ..++.+. + .+++|+||
T Consensus 104 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~i~~~~~~pgHt~g------~~~~~~~--~--~~~lf~GD 168 (227)
T 1mqo_A 104 KAHSTALTAELAKKNGYEEPLGDLQTVTNLKFG-----NMKVETFYPGKGHTED------NIVVWLP--Q--YNILVGGC 168 (227)
T ss_dssp EEECBHHHHHHHHHTTCCCCCCCBCSEEEEEET-----TEEEEEECCCCSSSSS------CCEEEET--T--TTEEEEET
T ss_pred EEEeccchHHHHHhcCCCCCccccCCCCeeeEC-----CEEEEEEecCCCCCCC------CEEEEEC--C--CCEEEEee
Confidence 8888777666665543 234556677788886 6777654 554222 3556553 2 37999999
Q ss_pred CCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHc--CCCEEEEeecccccc
Q 021237 238 CVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--HAKFIVPMKNGDLDS 296 (315)
Q Consensus 238 t~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l--~~k~~ip~H~g~f~~ 296 (315)
+.+...... .+.+ +... .....++++.++.+ ++++++|.|...++.
T Consensus 169 ~~~~~~~~~-----------~~~~-~~~~-~~~~~~sl~~l~~~~~~~~~i~pgHg~~~~~ 216 (227)
T 1mqo_A 169 LVKSTSAKD-----------LGNV-ADAY-VNEWSTSIENVLKRYRNINAVVPGHGEVGDK 216 (227)
T ss_dssp TSCCTTCCS-----------CCCC-TTCC-HHHHHHHHHHHHHHCCSCSEEEESSSCCBCT
T ss_pred eeeccCccc-----------cCcC-CCCC-HHHHHHHHHHHHHhcCCCCEEEcCCCCcccc
Confidence 876432111 0111 1111 11235667766665 789999999987754
No 51
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=99.35 E-value=6.8e-13 Score=119.39 Aligned_cols=163 Identities=20% Similarity=0.312 Sum_probs=102.8
Q ss_pred CCceEEEEE----eCeEEEEEe-CCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChh
Q 021237 76 TDVFKLTYL----EGNSWLWDL-DGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLK 150 (315)
Q Consensus 76 ~~~~~itwl----Ghss~lI~~-~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~ 150 (315)
.+.|+|+-+ +++||+|+. ++..+|||| |... .+ . .. +....+ +|++|++||.|+|| .+
T Consensus 5 ~g~m~i~~i~~~~~n~~yli~~~~~~~vlID~---G~~~-~i--~-----~~---l~~~g~-~i~~Il~TH~H~DH--~g 67 (258)
T 2qed_A 5 IGSMNLNSIPAFQDNYIWVLTNDEGRCVIVDP---GEAA-PV--L-----KA---IAEHKW-MPEAIFLTHHHHDH--VG 67 (258)
T ss_dssp --CCEEEEEEETTTEEEEEEECTTSEEEEECC---SCHH-HH--H-----HH---HHHHTC-EEEEEECCSCCHHH--HT
T ss_pred cCccEEEEecccCceEEEEEEECCCcEEEEeC---CCcH-HH--H-----HH---HHHcCC-CCCEEEeCCCCccc--cC
Confidence 455666666 356999998 678999999 4221 00 0 11 111123 68999999999999 78
Q ss_pred cHHHhhhhCCCceEEEcCChHHHHhhcCCceEEeCCCceEEecccCCCcEEEEEeecCCcCCCCCCCccEEEEEecCCce
Q 021237 151 TLKPLSKMSPNLKVIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQL 230 (315)
Q Consensus 151 tl~~l~~~~p~~~v~~~p~~~~~l~~~~~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~~~~~~~~g~~i~~~~~~~ 230 (315)
++..|.++++++++|+++... +. .....+..++.++++ +..+++..+|+|..| ..+|. . .
T Consensus 68 g~~~l~~~~~~~~v~~~~~~~--~~---~~~~~~~~g~~~~~g---~~~~~vi~tPGHt~g------~~~~~--~----~ 127 (258)
T 2qed_A 68 GVKELLQHFPQMTVYGPAETQ--DK---GATHLVGDGDTIRVL---GEKFTLFATPGHTLG------HVCYF--S----R 127 (258)
T ss_dssp THHHHHHHCTTCEEEECGGGG--GG---TCSEECCTTCEEEET---TEEEEEEECCSSSTT------CEEEE--E----T
T ss_pred CHHHHHHHCCCCEEEeccccc--CC---CCcEEeCCCCEEEEC---CcEEEEEECCCCCCC------CeEEE--c----C
Confidence 999998887668999876541 11 235678889899996 224555556664322 34554 2 2
Q ss_pred eEEEcCCCCCccccccccCCcEEEeccCCCcCCCccccCCH---HHHHHHHHHcCCC-EEEEeecccc
Q 021237 231 TLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQ---EDAVKLAKLLHAK-FIVPMKNGDL 294 (315)
Q Consensus 231 ~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~---eea~~~~~~l~~k-~~ip~H~g~f 294 (315)
+++|+||+.+.... |... .-++ .++++.+..+.++ +++|.|..+.
T Consensus 128 ~~lftGD~l~~~~~--------------g~~~-----~~~~~~~~~sl~~l~~l~~~~~v~pgHg~~~ 176 (258)
T 2qed_A 128 PYLFCGDTLFSGGC--------------GRLF-----EGTPSQMYQSLMKINSLPDDTLICCAHEYTL 176 (258)
T ss_dssp TEEEEETTEETTEE--------------CCCS-----SSCHHHHHHHHHHHHTSCTTCEEEESBCCHH
T ss_pred CEEEECCCCCCCCc--------------CCCC-----CCCHHHHHHHHHHHHcCCCCeEEECCCcchh
Confidence 69999999764322 1110 0123 3455556677776 7899998754
No 52
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.35 E-value=3.9e-13 Score=119.18 Aligned_cols=178 Identities=12% Similarity=0.133 Sum_probs=108.2
Q ss_pred EEEeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCC-CCCCCCEEEEcCCCCCCCChhcHHHhhhhCC
Q 021237 82 TYLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLS-DLPQVDCLLITQSLDDHCHLKTLKPLSKMSP 160 (315)
Q Consensus 82 twlGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~-~lp~iD~VlISH~H~DHld~~tl~~l~~~~p 160 (315)
.+++.|||+|+.++..|||||.++.... ......+... .+ +||+|++||.|.|| .+++..|.++
T Consensus 44 g~~~~n~~li~~~~~~iLID~G~~~~~~----------~~l~~~l~~~~~~-~i~~vi~TH~H~DH--~gg~~~l~~~-- 108 (243)
T 4hl2_A 44 GAVASNGLIVRDGGRVLVVDTAWTDDQT----------AQILNWIKQEINL-PVALAVVTHAHQDK--MGGMDALHAA-- 108 (243)
T ss_dssp EEEEEEEEEEEETTEEEEESCCSSHHHH----------HHHHHHHHHHTCC-CEEEEEECSSSHHH--HTTHHHHHHT--
T ss_pred CcccceEEEEEECCcEEEEECCCCCccH----------HHHHHHHHHhhCC-CeeEEEECCCCccc--cCCHHHHHhC--
Confidence 3577899999999999999994321010 0000011111 22 68999999999999 7899999875
Q ss_pred CceEEEcCChHHHHhhcCC----c------eEEeCCCceEEecccCCCcEEEE-EeecCCcCCCCCCCccEEEEEecCCc
Q 021237 161 NLKVIATPNAKTLLDPLFQ----N------VTYVEPGQSSEIEGRNGSKLRVK-ATAGPVLGPPWQRPENGYLVNSSQGQ 229 (315)
Q Consensus 161 ~~~v~~~p~~~~~l~~~~~----~------i~~l~~~~~~~l~~~~g~~l~i~-~~p~~~~g~~~~~~~~g~~i~~~~~~ 229 (315)
++++|+++.....+++... . ...++.++.++++ ++++. .+|+|..| ..++.+. +
T Consensus 109 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~v~~~~pGHt~g------~~~~~~~--~-- 173 (243)
T 4hl2_A 109 GIATYANALSNQLAPQEGMVAAQHSLTFAANGWVEPATAPNFG-----PLKVFYPGPGHTSD------NITVGID--G-- 173 (243)
T ss_dssp TCEEEEEHHHHHHGGGTTCCCCSEEECBCTTSBBCGGGSTTCT-----TEEEECCCSSSSTT------CCEEEET--T--
T ss_pred CCeEEECHHHHHHHhcccccccccccccccceEecCCCeEEEC-----CEEEEeCCCCCCcC------CEEEEEc--C--
Confidence 7899998887777765421 1 1124455566664 78883 35664322 3455553 2
Q ss_pred eeEEEcCCCCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHH-c-CCCEEEEeecccccccchhHHH
Q 021237 230 LTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKL-L-HAKFIVPMKNGDLDSKGFLASI 303 (315)
Q Consensus 230 ~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~-l-~~k~~ip~H~g~f~~~~~~~~~ 303 (315)
.+++|+||+.+....... |.. +..+ .....++++.++. + ..++++|.|....+ .+.++..
T Consensus 174 ~~~lf~GD~~~~~~~~~~-----------~~~-~~~d-~~~~~~sl~~l~~~l~~~~~v~pgHg~~~~-~~~i~~~ 235 (243)
T 4hl2_A 174 TDIAFGGCLIKDSKAKSL-----------GNL-GDAD-TEHYAASARAFGAAFPKASMIVMSHSAPDS-RAAITHT 235 (243)
T ss_dssp TTEEECTTTCCCTTCSCC-----------CCC-TTCC-TTTHHHHHHHHHHHSTTCCEEECSSSCCBC-THHHHHH
T ss_pred CCEEEEcceeeeccCCCc-----------CCC-CCCC-HHHHHHHHHHHHhhCCCceEEEeCCCCcCc-HHHHHHH
Confidence 379999999874322111 110 1111 1134566666654 4 68899999998876 4444433
No 53
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.34 E-value=1.7e-12 Score=123.96 Aligned_cols=183 Identities=13% Similarity=0.145 Sum_probs=107.6
Q ss_pred eCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCceE
Q 021237 85 EGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKV 164 (315)
Q Consensus 85 Ghss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~~v 164 (315)
..|||+|+. +..+||||+.. .. ...+. +.+..+ . +..+||+|++||.|.|| .+++..|.+++|++++
T Consensus 40 ~~n~~li~~-~~~iLID~G~~---~~-~~~~~----~~l~~~-~-~~~~i~~ii~TH~H~DH--~gg~~~l~~~~~~~~v 106 (414)
T 2q9u_A 40 SYNSYFIDD-ECPTVIDSVKY---PF-AEEWL----SRIAAC-C-PLDKIKYVVMNHAEGDH--ASSLKDHYHKFTNATF 106 (414)
T ss_dssp EECCEEECS-SSCEEECCCCG---GG-HHHHH----HHHHHH-S-CGGGCCEEECSCCSGGG--TTTHHHHGGGSTTCEE
T ss_pred ceeEEEEEC-CCEEEEeCCCc---cc-HHHHH----HHHHHh-c-CcccCCEEEeCCCCcch--hcCHHHHHHHCCCCEE
Confidence 357899985 77999999432 10 00000 111111 1 12378999999999999 6899999888788999
Q ss_pred EEcCChHHHHhhc-C---CceEEeCCCceEEecccCCCcEEEEEee-cCCcCCCCCCCccEEEEEecCCceeEEEcCCCC
Q 021237 165 IATPNAKTLLDPL-F---QNVTYVEPGQSSEIEGRNGSKLRVKATA-GPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCV 239 (315)
Q Consensus 165 ~~~p~~~~~l~~~-~---~~i~~l~~~~~~~l~~~~g~~l~i~~~p-~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~ 239 (315)
++++...+.+++. + .++..++.+++++++ +..+++..+| +|.. .+.++..++ .+++|+||..
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lg---~~~~~~~~~p~gHt~--------~~~~~~~~~--~~~lf~GD~~ 173 (414)
T 2q9u_A 107 VCTKKCQEHLKILYGMEKATWLIVDDKYTLKIG---KRTLKFIPVPLLHWP--------DSTFTYCPE--DKILFSNDGF 173 (414)
T ss_dssp EECHHHHHHHHHHHCCTTCCEEECCTTCCEECS---SCEEEEEECTTSSST--------TCEEEEETT--TTEEEEETTT
T ss_pred EECHHHHHHHHHHhCCCCCeeEEeCCCCEEEEC---CeEEEEEeCCCCCCC--------CceEEEECC--CeEEEEcccc
Confidence 9988877766542 2 357788899999986 2235555566 4321 123333332 3799999965
Q ss_pred Ccccccccc----CCc--EEEeccCCCcCCC--ccccCCHHHHHHHHHHcCCCEEEEeeccccc
Q 021237 240 YNQNFLEKE----RSD--IIITPVIKQLLPK--FTLVSGQEDAVKLAKLLHAKFIVPMKNGDLD 295 (315)
Q Consensus 240 ~~~~~~~~~----~~D--l~i~~~~g~~~p~--~~~h~~~eea~~~~~~l~~k~~ip~H~g~f~ 295 (315)
.. ...... ..+ ..+.+. ..|+.. ........++++.++.+++++++|.|...++
T Consensus 174 ~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~sl~~l~~l~~~~i~pgHg~~~~ 235 (414)
T 2q9u_A 174 GQ-HYATSRRWADECDVSHVMHLF-KEYTANILGLFSAQMRKALEVASTVEIKYILSAHGVSWR 235 (414)
T ss_dssp CC-CCCCSCCBGGGSCHHHHHHHH-HHHHHHHTTTCHHHHHHHHHHHHTSCCSEEEESSSCBEE
T ss_pred cc-ccCcccccccccchhhHHHHH-HHHHHHheehHHHHHHHHHHHHhCCCCCEEECCCcCeec
Confidence 32 110000 000 000000 000000 0000012578888888999999999998876
No 54
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=99.33 E-value=4.9e-13 Score=117.24 Aligned_cols=176 Identities=11% Similarity=0.082 Sum_probs=109.7
Q ss_pred EeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCce
Q 021237 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLK 163 (315)
Q Consensus 84 lGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~~ 163 (315)
.+.||++|+.++..|||||..+.... ..+ ...+..+. ..+|++|++||.|.|| .+++..|.+ ++++
T Consensus 24 ~~~n~~li~~~~~~iLiD~G~~~~~~---~~~----~~~l~~~~---~~~i~~ii~TH~H~DH--~gg~~~~~~--~~~~ 89 (233)
T 3q6v_A 24 VQENSMVYIGTDGITIIGATWTPETA---ETL----YKEIRKVS---PLPINEVINTNYHTDR--AGGNAYWKT--LGAK 89 (233)
T ss_dssp SCEEEEEEECSSCEEEESCCSSHHHH---HHH----HHHHHHHC---CCCEEEEECSSSSHHH--HTTHHHHHH--TTCE
T ss_pred CCCcEEEEEeCCeEEEEECCCCHHHH---HHH----HHHHHHhc---CCCcEEEEECCCChhh--hChHHHHhh--CCCE
Confidence 46789999998999999994321000 000 01111111 2378999999999999 789999884 5899
Q ss_pred EEEcCChHHHHhhc--------------C------CceEEeCCCceEEecccCCCcEEEEEe-ecCCcCCCCCCCccEEE
Q 021237 164 VIATPNAKTLLDPL--------------F------QNVTYVEPGQSSEIEGRNGSKLRVKAT-AGPVLGPPWQRPENGYL 222 (315)
Q Consensus 164 v~~~p~~~~~l~~~--------------~------~~i~~l~~~~~~~l~~~~g~~l~i~~~-p~~~~g~~~~~~~~g~~ 222 (315)
+++++.....+++. . .....++.+ .+++ ++++++..+ |+|..| ..++.
T Consensus 90 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~---~~~~~v~~~~pGHt~g------~~~~~ 158 (233)
T 3q6v_A 90 IVATQMTYDLQKSQWGSIVNFTRQGNNKYPNLEKSLPDTVFPGD--FNLQ---NGSIRAMYLGEAHTKD------GIFVY 158 (233)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCCCCSEEESSC--EEET---TTTEEEECCCCSSSSS------CCEEE
T ss_pred EEEcHHHHHHHHhhhHHHHHHHhccccccccccccCCCEEeCCC--eEEc---CceEEEEECCCCCCcC------cEEEE
Confidence 99998876654321 0 112234433 3343 347888877 775332 24444
Q ss_pred EEecCCceeEEEcCCCCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHc------CCCEEEEeecccccc
Q 021237 223 VNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL------HAKFIVPMKNGDLDS 296 (315)
Q Consensus 223 i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l------~~k~~ip~H~g~f~~ 296 (315)
+. + .+++| ||+.+...+ +. .+.. -.....++++.++++ ++++++|.|...+..
T Consensus 159 ~~--~--~~~lf-gD~~~~~~~--------------~~-~~~~-~~~~~~~sl~~l~~l~~~~~~~~~~i~pgHg~~~~~ 217 (233)
T 3q6v_A 159 FP--A--ERVLY-GNCILKENL--------------GN-MSFA-NRTEYPKTLEKLKGLIEQGELKVDSIIAGHDTPIHD 217 (233)
T ss_dssp ET--T--TTEEE-CTTTSCSSC--------------CC-CTTC-CTTHHHHHHHHHHHHHHTTSSCCSEEECSSSSSEEC
T ss_pred ec--c--CCEEE-CceeccccC--------------CC-CCcC-CHHHHHHHHHHHHHhhhcccCCCeEEECCCCCccCC
Confidence 43 2 26888 998765422 10 1100 122457788888888 999999999998877
Q ss_pred cchhHHHHh
Q 021237 297 KGFLASIIQ 305 (315)
Q Consensus 297 ~~~~~~~~~ 305 (315)
.+.++.+++
T Consensus 218 ~~~i~~~~~ 226 (233)
T 3q6v_A 218 VGLIDHYLT 226 (233)
T ss_dssp THHHHHHHH
T ss_pred HHHHHHHHH
Confidence 766655544
No 55
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.32 E-value=3.8e-12 Score=113.32 Aligned_cols=144 Identities=13% Similarity=0.114 Sum_probs=88.1
Q ss_pred EEEEeCeEEEEEeCCcEEEEccccCCCCC-CCCCccc---cC--------CccccCCCCCCCC--CCCCEEEEcCCCCCC
Q 021237 81 LTYLEGNSWLWDLDGVKVLVDPILVGNLD-FGIPWLF---DA--------GKKFLKSFQLSDL--PQVDCLLITQSLDDH 146 (315)
Q Consensus 81 itwlGhss~lI~~~g~~ILiDP~~~g~~s-~p~~~~~---~~--------~~~~~~~~~~~~l--p~iD~VlISH~H~DH 146 (315)
...++.+||||+.++.+||||+..+.... .+-.+-. .+ .+.....+....+ .+||+|+|||.|+||
T Consensus 34 ~~~~~~~~~lI~~~~~~iLiDtG~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~l~~~g~~~~~I~~VilTH~H~DH 113 (254)
T 3dha_A 34 LLNLPVWCYLLETEEGPILVDTGMPESAVNNEGLFNGTFVEGQILPKMTEEDRIVNILKRVGYEPDDLLYIISSHLHFDH 113 (254)
T ss_dssp EEEEEEEEEEEEETTEEEEECCCCCGGGBTCTTTTTTSTTTTTEEEEBCGGGSHHHHHHHHTCCGGGCSEEECSCCSHHH
T ss_pred eEEEeeEEEEEECCCccEEEECCCChhhhcccccccccccccccccccCchhhHHHHHHHcCCCHHHCCEEEcCCChhhc
Confidence 45677899999999999999996532110 0000000 00 0000000100112 248999999999999
Q ss_pred CChhcHHHhhhhCCCceEEEcCChHHHHhhc----------CCceEEeCCCceEEecccCCCcEEEEEeecCCcCCCCCC
Q 021237 147 CHLKTLKPLSKMSPNLKVIATPNAKTLLDPL----------FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQR 216 (315)
Q Consensus 147 ld~~tl~~l~~~~p~~~v~~~p~~~~~l~~~----------~~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~~~~~ 216 (315)
.+++..+. ++++++++...+.+... ..++..++ ++...++ ++++..+|+|..|
T Consensus 114 --~gg~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~i~~~~~pGHt~g----- 176 (254)
T 3dha_A 114 --AGGNGAFT----NTPIIVQRTEYEAALHREEYMKECILPHLNYKIIE-GDYEVVP-----GVQLLYTPGHSPG----- 176 (254)
T ss_dssp --HTTGGGCS----SSCEEEEHHHHHHHHHCTTSCGGGSCTTSCEEEEC-SSEEEET-----TEEEEECCSSSTT-----
T ss_pred --CCChHHCC----CCEEEECHHHHHHhhccccccccccCcccceEEec-CCccccC-----CEEEEECCCCCCC-----
Confidence 68887765 68899988776654321 01233333 4444454 6999888886433
Q ss_pred CccEEEEEecCCceeEEEcCCCCCccc
Q 021237 217 PENGYLVNSSQGQLTLYYEPHCVYNQN 243 (315)
Q Consensus 217 ~~~g~~i~~~~~~~~i~~sGDt~~~~~ 243 (315)
..++.+...+ +.+++|+||+.+...
T Consensus 177 -~~~~~~~~~~-~~~vl~~GD~~~~~~ 201 (254)
T 3dha_A 177 -HQSLFIETEQ-SGSVLLTIDASYTKE 201 (254)
T ss_dssp -CEEEEEEETT-TEEEEEEETTCSSHH
T ss_pred -CEEEEEEeCC-CCEEEEEecccchhh
Confidence 4678887642 358999999998764
No 56
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=99.31 E-value=1.8e-12 Score=116.30 Aligned_cols=162 Identities=17% Similarity=0.142 Sum_probs=101.5
Q ss_pred EEeCe-EEEEEeC--CcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhC
Q 021237 83 YLEGN-SWLWDLD--GVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMS 159 (315)
Q Consensus 83 wlGhs-s~lI~~~--g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~ 159 (315)
.++.+ ||+|+.+ +..+|||| +.+. . .. .. +....+ +|++|++||.|.|| ++++..|.+++
T Consensus 8 ~~~~n~~yli~~~~~~~~~lID~---g~~~-~--i~-----~~---l~~~g~-~i~~Il~TH~H~DH--~gg~~~l~~~~ 70 (254)
T 1xm8_A 8 CLKDNYAYILHDEDTGTVGVVDP---SEAE-P--II-----DS---LKRSGR-NLTYILNTHHHYDH--TGGNLELKDRY 70 (254)
T ss_dssp ETTTEEEEEEECTTTCCEEEECC---SSHH-H--HH-----HH---HHHHTC-CCCEEECSSCCHHH--HTTHHHHHHHH
T ss_pred ccCCeEEEEEEECCCCEEEEEeC---CCHH-H--HH-----HH---HHHcCC-CccEEEECCCCCcc--cccHHHHHHHc
Confidence 35565 9999874 67899999 4221 0 00 11 111122 68999999999999 78999998765
Q ss_pred CCceEEEcCChHHHHhhcCCceEEeCCCceEEecccCCCcEEEEEeecCCcCCCCCCCccEEEEEecCCceeEEEcCCCC
Q 021237 160 PNLKVIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCV 239 (315)
Q Consensus 160 p~~~v~~~p~~~~~l~~~~~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~ 239 (315)
++++++++.....+.. ....+..++.++++ +..+++..+|+|..| ..+|.+.. .+++|+||+.
T Consensus 71 -~~~v~~~~~~~~~~~~---~~~~~~~g~~~~lg---~~~~~vi~tPGHt~g------~~~~~~~~----~~~lftGD~l 133 (254)
T 1xm8_A 71 -GAKVIGSAMDKDRIPG---IDMALKDGDKWMFA---GHEVHVMDTPGHTKG------HISLYFPG----SRAIFTGDTM 133 (254)
T ss_dssp -CCEEEEEGGGGGGSTT---EEEEECTTCEEEET---TEEEEEEECCSSSSS------CEEEEEGG----GTEEEEETTE
T ss_pred -CCeEEEchhhhhcCCC---CceeeCCCCEEEEC---CEEEEEEECCCCCCC------cEEEEECC----CCEEEEcCcc
Confidence 6899998776554432 34568889999996 223555556764322 45666642 3699999997
Q ss_pred CccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHcCCC-EEEEeecccc
Q 021237 240 YNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAK-FIVPMKNGDL 294 (315)
Q Consensus 240 ~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l~~k-~~ip~H~g~f 294 (315)
+.... |. .+... .....++++.+..+.++ .++|.|....
T Consensus 134 ~~~~~--------------g~-~~~~~-~~~~~~Sl~~l~~l~~~~~v~pgHg~~~ 173 (254)
T 1xm8_A 134 FSLSC--------------GK-LFEGT-PKQMLASLQKITSLPDDTSIYCGHEYTL 173 (254)
T ss_dssp ETTEE--------------CC-CSSSC-HHHHHHHHHHHHTSCTTCEEEESBCCHH
T ss_pred ccCCC--------------CC-CCCCC-HHHHHHHHHHHHccCCCcEEEeCCcchh
Confidence 64321 11 00000 00123455566667665 8999998754
No 57
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.29 E-value=4e-12 Score=123.78 Aligned_cols=185 Identities=14% Similarity=0.151 Sum_probs=109.7
Q ss_pred CCceEEEE-----EeCeEEEEE--eCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCC
Q 021237 76 TDVFKLTY-----LEGNSWLWD--LDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCH 148 (315)
Q Consensus 76 ~~~~~itw-----lGhss~lI~--~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld 148 (315)
.+.|.+.- ++++||+|. .++..||||| +... .+....+....+ +|++||+||.|.||
T Consensus 22 ~~~m~i~~~~~~~~~~nsyli~~~~~~~~vlID~---g~~~----------~~~~~~l~~~g~-~i~~Il~TH~H~DH-- 85 (466)
T 3r2u_A 22 SNAMFFKQFYDKHLSQASYLIGCQKTGEAMIIDP---IRDL----------SSYIRVADEEGL-TITHAAETHIHADF-- 85 (466)
T ss_dssp -CCEEEEEEEETTTTEEEEEEEETTTCEEEEESC---CSCC----------HHHHHHHHHHTC-EEEEEECSSCCSSS--
T ss_pred CCCeEEEEEecCCccceEEEEEeCCCCEEEEEcC---CCCH----------HHHHHHHHHCCC-eeeEEEECCCChhh--
Confidence 34465533 368999994 5788999999 4221 011011111122 58999999999999
Q ss_pred hhcHHHhhhhCCCceEEEcCChHHHHhhcC--CceEEeCCCceEEecccCCCcEEEEEeecCCcCCCCCCCccEEEEEec
Q 021237 149 LKTLKPLSKMSPNLKVIATPNAKTLLDPLF--QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSS 226 (315)
Q Consensus 149 ~~tl~~l~~~~p~~~v~~~p~~~~~l~~~~--~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~~~~~~~~g~~i~~~ 226 (315)
++++..|.+++ ++++++++.....+.... .....+..++.++++ +..+++..+|+|..| ..+|.+...
T Consensus 86 ~gg~~~l~~~~-~a~v~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g---~~~l~vi~tPGHT~g------~~~~~~~~~ 155 (466)
T 3r2u_A 86 ASGIRDVAIKL-NANIYVSGESDDTLGYKNMPNHTHFVQHNDDIYVG---NIKLKVLHTPGHTPE------SISFLLTDE 155 (466)
T ss_dssp CCCHHHHHHHH-CCEEEEECCSCTTTSCCSCCTTCEEECTTCEEEET---TEEEEEEECCSSSTT------CEEEEEECG
T ss_pred hccHHHHHHhh-CCeEEECcchhhhhccccCCCCCEEeCCCCEEEEC---CEEEEEEECCCCCCC------CEEEEEcCC
Confidence 68999998876 799999887654333211 256788999999997 223455556664322 567888763
Q ss_pred C---CceeEEEcCCCCCccccccccCCcEEEeccCCCcCCCcc-ccCCHHHHHHHHHHcCCC-EEEEeec
Q 021237 227 Q---GQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFT-LVSGQEDAVKLAKLLHAK-FIVPMKN 291 (315)
Q Consensus 227 ~---~~~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~-~h~~~eea~~~~~~l~~k-~~ip~H~ 291 (315)
+ ++.+++|+||+.+.... +..|+.--.. + +..... ......++++.+..+..+ +++|.|.
T Consensus 156 ~~~~~~~~~lftGD~lf~~~~---gr~dl~~~~~-~-~~g~~~~~~~~~~~Sl~kl~~L~~~~~v~PgHg 220 (466)
T 3r2u_A 156 GAGAQVPMGLFSGDFIFVGDI---GRPDLLEKAV-K-VEGSSEIGAKQMFKSIESIKDLPDYIQIWPGHG 220 (466)
T ss_dssp GGTCCSCCEEEEETTBCSSCB---CCCCCCCGGG-C-CTTHHHHHHHHHHHHHHHHTTSCTTCEEEESBC
T ss_pred CccCCCceEEEECCcccCCCC---CCcCcccccc-c-cCCCchHHHHHHHHHHHHHhcCCCCeEEECCCC
Confidence 1 22469999999875432 2333210000 0 000000 001224455555666776 5999999
No 58
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=99.29 E-value=4.1e-12 Score=111.62 Aligned_cols=170 Identities=13% Similarity=0.107 Sum_probs=107.5
Q ss_pred EEeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCc
Q 021237 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNL 162 (315)
Q Consensus 83 wlGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~ 162 (315)
.++.+||+|+.++..+||||..+.... ++....+....+ +|++|++||.|.|| ++++..+.+. ++
T Consensus 30 ~~~~n~~li~~~~~~iliD~g~~~~~~----------~~~~~~l~~~g~-~i~~ii~TH~H~DH--~gg~~~l~~~--~~ 94 (228)
T 1jjt_A 30 VVPKHGLVVLVNAEAYLIDTPFTAKDT----------EKLVTWFVERGY-KIKGSISSHFHSDS--TGGIEWLNSR--SI 94 (228)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSHHHH----------HHHHHHHHTTTC-EEEEEECSSSSHHH--HTTHHHHHHT--TC
T ss_pred cccceEEEEEECCcEEEEeCCCChhhH----------HHHHHHHHHcCC-CeeEEEeCCCChhh--hccHHHHHhC--CC
Confidence 467899999999999999994321000 000011111122 78999999999999 6888888763 78
Q ss_pred eEEEcCChHHHHhhcCCc--eEEeCCCceEEecccCCCcEEEE-EeecCCcCCCCCCCccEEEEEecCCceeEEEcCCCC
Q 021237 163 KVIATPNAKTLLDPLFQN--VTYVEPGQSSEIEGRNGSKLRVK-ATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCV 239 (315)
Q Consensus 163 ~v~~~p~~~~~l~~~~~~--i~~l~~~~~~~l~~~~g~~l~i~-~~p~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~ 239 (315)
++++++.....+++.+.. -..++ ++.+.++ +..+++. .+|+|..| ..++.+. + .+++|+||+.
T Consensus 95 ~v~~~~~~~~~~~~~~~~~~~~~~~-g~~~~l~---~~~i~~~~~~pGHt~g------~~~~~~~--~--~~~lf~GD~~ 160 (228)
T 1jjt_A 95 PTYASELTNELLKKDGKVQATNSFS-GVNYWLV---KNKIEVFYPGPGHTPD------NVVVWLP--E--RKILFGGCFI 160 (228)
T ss_dssp CEEEEHHHHHHHHHTTCCCCSEEEC-SSCCEEE---TTTEEEECCCCSSSTT------CCEEEET--T--TTEEEEETTC
T ss_pred EEEEChHHHHHHHhcCCcCcccccc-CcceEec---CceEEEEecCCCCCCC------cEEEEEC--C--CcEEEEeccc
Confidence 999988877777654211 12232 4556665 3467775 67875332 3455553 2 3799999987
Q ss_pred CccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHc--CCCEEEEeeccccccc
Q 021237 240 YNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--HAKFIVPMKNGDLDSK 297 (315)
Q Consensus 240 ~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l--~~k~~ip~H~g~f~~~ 297 (315)
+.... +.. +..+ -....++++.++++ ++++++|.|....+.+
T Consensus 161 ~~~~~--------------~~~-~~~d-~~~~~~sl~~l~~~~~~~~~i~pgHg~~~~~~ 204 (228)
T 1jjt_A 161 KPYGL--------------GNL-GDAN-IEAWPKSAKLLKSKYGKAKLVVPSHSEVGDAS 204 (228)
T ss_dssp CTTCC--------------CCC-TTCC-TTTHHHHHHHHHHHTTTCSEEEESSSCCBCTH
T ss_pred ccccc--------------Ccc-CccC-HHHHHHHHHHHHhhcCCCCEEEcCCCCcCCHH
Confidence 63211 100 0011 12356788888887 8999999999887654
No 59
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=99.27 E-value=3.3e-12 Score=115.03 Aligned_cols=158 Identities=13% Similarity=0.097 Sum_probs=98.5
Q ss_pred CeEEEEEeC--CcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCce
Q 021237 86 GNSWLWDLD--GVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLK 163 (315)
Q Consensus 86 hss~lI~~~--g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~~ 163 (315)
.+||+|..+ +..+|||| |... . .. . .+....+ ++++|++||.|+|| ++++..|.+++|+++
T Consensus 12 n~~yli~~~~~~~~vlID~---G~~~-~--i~-----~---~l~~~g~-~i~~IllTH~H~DH--~gg~~~l~~~~~~~~ 74 (260)
T 1qh5_A 12 NYMYLVIDDETKEAAIVDP---VQPQ-K--VV-----D---AARKHGV-KLTTVLTTHHHWDH--AGGNEKLVKLESGLK 74 (260)
T ss_dssp EEEEEEEETTTTEEEEESC---SSHH-H--HH-----H---HHHHHTC-EEEEEECCCSSHHH--HTTHHHHHHHSTTCE
T ss_pred eEEEEEEECCCCEEEEEcC---CCHH-H--HH-----H---HHHHcCC-CccEEEeCCCCccc--cCCHHHHHHHCCCCE
Confidence 459999874 68999999 4221 0 00 1 1111122 58999999999999 789999988877799
Q ss_pred EEEcCChHHHHhhcCCceEEeCCCceEEecccCCCcEEEEEeecCCcCCCCCCCccEEEE-EecCCceeEEEcCCCCCcc
Q 021237 164 VIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLV-NSSQGQLTLYYEPHCVYNQ 242 (315)
Q Consensus 164 v~~~p~~~~~l~~~~~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~~~~~~~~g~~i-~~~~~~~~i~~sGDt~~~~ 242 (315)
||+++... ......+..++.++++ +..+++..+|+|..| ..+|.+ +....+.+++|+||+.+..
T Consensus 75 v~~~~~~~------~~~~~~~~~g~~~~~g---~~~~~vi~tPGHt~g------~~~~~~~~~~~~~~~~lftGD~l~~~ 139 (260)
T 1qh5_A 75 VYGGDDRI------GALTHKITHLSTLQVG---SLNVKCLATPCHTSG------HICYFVSKPGGSEPPAVFTGDTLFVA 139 (260)
T ss_dssp EEESCTTS------TTCSEECCTTCEEEET---TEEEEEEECCSSSTT------CEEEEEECSSSSSCCEEEEETTEETT
T ss_pred EEECcccC------CCCCEEeCCCCEEEEC---CEEEEEEECCCCCCC------CEEEEEeccCCCCCCEEEEcCccccC
Confidence 99876431 1234567888889986 223555556664322 467776 3210124899999997543
Q ss_pred ccccccCCcEEEeccCCCcCCCccccCCHHHHHHHH----HHcCCC-EEEEeecccc
Q 021237 243 NFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLA----KLLHAK-FIVPMKNGDL 294 (315)
Q Consensus 243 ~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~----~~l~~k-~~ip~H~g~f 294 (315)
.. |.. + .-++++..+.+ ..+..+ +++|.|..+.
T Consensus 140 ~~--------------g~~-~----~~~~~~~~~Sl~~~l~~l~~~~~v~pgHg~~~ 177 (260)
T 1qh5_A 140 GC--------------GKF-Y----EGTADEMCKALLEVLGRLPPDTRVYCGHEYTI 177 (260)
T ss_dssp EE--------------CCC-T----TCCHHHHHHHHHTTTTTSCTTCEEEESBCCHH
T ss_pred Cc--------------CCC-C----CCCHHHHHHHHHHHHHcCCCCeEEEcCCCchh
Confidence 21 211 1 11455555544 345666 6899998653
No 60
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=99.26 E-value=9.1e-11 Score=109.47 Aligned_cols=145 Identities=14% Similarity=0.131 Sum_probs=97.8
Q ss_pred CCCCEEEEcCCCCCCCChhcHHHhhhhCCCceEEEcCChHHHHhhc----CCceEEeCCCceEEeccc--CCCcEEEEEe
Q 021237 132 PQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKVIATPNAKTLLDPL----FQNVTYVEPGQSSEIEGR--NGSKLRVKAT 205 (315)
Q Consensus 132 p~iD~VlISH~H~DHld~~tl~~l~~~~p~~~v~~~p~~~~~l~~~----~~~i~~l~~~~~~~l~~~--~g~~l~i~~~ 205 (315)
++||+|||||.|.|| +++|..+. +++||+++.+.+.++.. ...+..+++++.+.+.+. ..++++|+++
T Consensus 23 ~~i~ai~lTH~H~DH--iggl~~l~----~~pVy~s~~t~~ll~~~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~v~~~ 96 (336)
T 3zdk_A 23 GTARLFFLSHMHSDH--TVGLSSTW----ARPLYCSPITAHLLHRHLQVSKQWIQALEVGESHVLPLDEIGQETMTVTLL 96 (336)
T ss_dssp CSSCEEECCCCCGGG--STTCSTTC----CSCEEECHHHHHHHHHHHCCCTTTEEECCTTSEEEEESSSSSSCEEEEEEE
T ss_pred CCCCEEEECCChHHH--HCchHHHc----CCCEEecHHHHHHHHHhhhhcccceEecCCCCeEEecCcccccCCEEEEEE
Confidence 378999999999999 57877764 58899999988866543 235788888888766210 1248999999
Q ss_pred ecCCcCCCCCCCccEEEEEecCCceeEEEcCCCCCcccccc------ccCCcEEEeccCCCcCCCccccCCHHHHHHHHH
Q 021237 206 AGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLE------KERSDIIITPVIKQLLPKFTLVSGQEDAVKLAK 279 (315)
Q Consensus 206 p~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~------~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~ 279 (315)
++.|. . ..++|.|+.++ .+|+|+||+.+.....+ ..++|++++++ .-..+.. .+.+.+++.+.+.
T Consensus 97 ~~~H~-~----gs~~~~i~~~~--~~i~~tGD~~~~~~~~~~~~l~~~~~vD~Li~Ds-T~~~~~~-~~pse~~v~~~l~ 167 (336)
T 3zdk_A 97 DANHC-P----GSVMFLFEGYF--GTILYTGDFRYTPSMLKEPALTLGKQIHTLYLDN-TNCNPAL-VLPSRQEAAHQIV 167 (336)
T ss_dssp ECSSS-T----TCEEEEEEETT--EEEEECCSCCCCGGGGGCGGGSSCCCCSEEEECC-TBCCTTC-CCCCHHHHHHHHH
T ss_pred ECCCC-c----ceEEEEEEeCC--ceEEEeCCCCCCcccccchhhhccCCccEEEEec-CCCCCCC-CCCCHHHHHHHHH
Confidence 98652 1 25789998854 59999999998776432 24899999997 2222211 2345455555444
Q ss_pred Hc----CCCEEEEeec
Q 021237 280 LL----HAKFIVPMKN 291 (315)
Q Consensus 280 ~l----~~k~~ip~H~ 291 (315)
++ ...+++-.++
T Consensus 168 ~~i~~~~~g~vii~~f 183 (336)
T 3zdk_A 168 QLIRKHPQHNIKIGLY 183 (336)
T ss_dssp HHHHTCTTSEEEEEEC
T ss_pred HHHHhCCCCcEEEeec
Confidence 33 3334554444
No 61
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=99.25 E-value=9.6e-12 Score=112.02 Aligned_cols=170 Identities=12% Similarity=0.088 Sum_probs=106.1
Q ss_pred EEeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCC-CCCCCCEEEEcCCCCCCCChhcHHHhhhhCCC
Q 021237 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLS-DLPQVDCLLITQSLDDHCHLKTLKPLSKMSPN 161 (315)
Q Consensus 83 wlGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~-~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~ 161 (315)
.++.|||+|+.++..|||||..+. .. . .+....+... .. +||+|++||.|.|| ++++..+.+. +
T Consensus 65 ~~~~n~~li~~~~~~iLID~G~~~-~~-----~----~~l~~~l~~~~g~-~i~~VilTH~H~DH--~gg~~~~~~~--~ 129 (265)
T 2y8b_A 65 VYSSNGLIVRDADELLLIDTAWGA-KN-----T----VALLAEIEKQIGL-PVTRSISTHFHDDR--VGGVDVLRAA--G 129 (265)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSH-HH-----H----HHHHHHHHHHTCS-CEEEEECSSSSHHH--HTTHHHHHHT--T
T ss_pred cccceEEEEEECCeEEEEeCCCCH-HH-----H----HHHHHHHHHhcCC-CeEEEEeCCCChhh--cCCHHHHhhC--C
Confidence 567899999999999999994321 00 0 0000011100 22 68999999999999 6888888763 7
Q ss_pred ceEEEcCChHHHHhhcCC--ceEEe----CCCceEEecccCCCcEEE-EEeecCCcCCCCCCCccEEEEEecCCceeEEE
Q 021237 162 LKVIATPNAKTLLDPLFQ--NVTYV----EPGQSSEIEGRNGSKLRV-KATAGPVLGPPWQRPENGYLVNSSQGQLTLYY 234 (315)
Q Consensus 162 ~~v~~~p~~~~~l~~~~~--~i~~l----~~~~~~~l~~~~g~~l~i-~~~p~~~~g~~~~~~~~g~~i~~~~~~~~i~~ 234 (315)
+++++++...+.+++... .-..+ +.++.+.++ ++++ ..+|+|..| ..++.+.. .+++|
T Consensus 130 a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~v~~~~pGHt~g------~~~~~~~~----~~~lf 194 (265)
T 2y8b_A 130 VATYTSPLTRQLAEAAGNEVPAHSLKALSSSGDVVRFG-----PVEVFYPGAAHSGD------NLVVYVPA----VRVLF 194 (265)
T ss_dssp CEEEECHHHHHHHHHTTCCCCSEECSSCSSTTEEEEET-----TEEEEECCSSSSTT------CCEEEETT----TTEEE
T ss_pred CeEEECHHHHHHHHhcccccccccccccCCCCcEEeec-----CEEEEecCCCCCCC------CEEEEecC----CCEEE
Confidence 899998887776654321 11222 455566664 7888 567886433 35665532 37999
Q ss_pred cCCCCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHc--CCCEEEEeeccccc
Q 021237 235 EPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--HAKFIVPMKNGDLD 295 (315)
Q Consensus 235 sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l--~~k~~ip~H~g~f~ 295 (315)
+||+.+...... .+.. ...+ .....++++.++++ +.+.++|.|...++
T Consensus 195 ~GD~~~~~~~~~-----------~~~~-~~~d-~~~~~~sl~~l~~~~~~~~~v~pgHg~~~~ 244 (265)
T 2y8b_A 195 GGCAVHEASRES-----------AGNV-ADAN-LAEWPATIKRIQQRYPEAEVVIPGHGLPGG 244 (265)
T ss_dssp EETTSCCTTCCS-----------CCCC-TTCC-TTTHHHHHHHHHHHCTTCSEEEESSSCCBC
T ss_pred EccccccCCCcc-----------cCcC-CcCC-HHHHHHHHHHHHhhCCCCCEEECCCCCCCC
Confidence 999887531101 0100 0000 11345677777776 78999999998775
No 62
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=99.24 E-value=1.3e-11 Score=114.10 Aligned_cols=181 Identities=14% Similarity=0.098 Sum_probs=104.4
Q ss_pred CceEEEEE---e-CeEEEEEe--CCcEEEEccccCCCCCCCCCccccCCccccCCCCCC-CCCCCCEEEEcCCCCCCCCh
Q 021237 77 DVFKLTYL---E-GNSWLWDL--DGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLS-DLPQVDCLLITQSLDDHCHL 149 (315)
Q Consensus 77 ~~~~itwl---G-hss~lI~~--~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~-~lp~iD~VlISH~H~DHld~ 149 (315)
..|+|.-+ + .+||+|+. ++..+||||..... .. ...+ ++.+..+.+. ...+|++||+||.|+|| +
T Consensus 27 ~~m~i~~i~~~~~n~~ylI~~~~~~~~ilID~G~~~~-~~-~~~l----~~~l~~~g~~~~~~~i~~IllTH~H~DH--~ 98 (311)
T 2p18_A 27 SAFSVTVVPTLKDNFSYLINDHTTHTLAAVDVNADYK-PI-LTYI----EEHLKQQGNADVTYTFSTILSTHKHWDH--S 98 (311)
T ss_dssp TTEEEEEEEETTTEEEEEEEETTTTEEEEESCCSCCH-HH-HHHH----HHTC--------CCEEEEEEESSSSHHH--H
T ss_pred CCcEEEEEecCCCcEEEEEEeCCCCcEEEEeCCCChH-HH-HHHH----HHHHhhcCCCCCCCCccEEEeCCCCccc--c
Confidence 44555444 3 35999998 57899999932110 00 0111 0110000110 01278999999999999 6
Q ss_pred hcHHHhhhhCC------CceEEEcCChHHHHhhcCCceEEeCCCceEEecccCCCcEEEEEeecCCcCCCCCCCccEEEE
Q 021237 150 KTLKPLSKMSP------NLKVIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLV 223 (315)
Q Consensus 150 ~tl~~l~~~~p------~~~v~~~p~~~~~l~~~~~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~~~~~~~~g~~i 223 (315)
+++..|.++++ ++++|+++... .......+..++.++++ +..+++..+|++..| ..+|.+
T Consensus 99 gg~~~l~~~~~~~~~~~~~~v~~~~~~~-----~~~~~~~l~~g~~l~lg---~~~l~vi~tPGHT~g------~i~~~~ 164 (311)
T 2p18_A 99 GGNAKLKAELEAMNSTVPVVVVGGANDS-----IPAVTKPVREGDRVQVG---DLSVEVIDAPCHTRG------HVLYKV 164 (311)
T ss_dssp TTHHHHHHHHHSCC--CCCEEEEEGGGT-----CTTCSEEECTTCEEEET---TEEEEEEECCSSSTT------CEEEEE
T ss_pred CCHHHHHHhhhhcccCCCCEEEEechhc-----CCCCceEeCCCCEEEEC---CeEEEEEECCCCCcc------cEEEEE
Confidence 89988887653 57888865431 11235677888999996 224555556664332 467877
Q ss_pred EecC-Cce-eEEEcCCCCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHc--------CCC-EEEEeecc
Q 021237 224 NSSQ-GQL-TLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--------HAK-FIVPMKNG 292 (315)
Q Consensus 224 ~~~~-~~~-~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l--------~~k-~~ip~H~g 292 (315)
+.++ .+. +++|+||+.+.... |... ..+ .....++++.+..+ ..+ +++|.|..
T Consensus 165 ~~~~~~~~~~~lftGD~l~~~~~--------------g~~~-~~~-~~~~~~Sl~kl~~l~~~~~~~~~~~~~v~pgHg~ 228 (311)
T 2p18_A 165 QHPQHPNDGVALFTGDTMFIAGI--------------GAFF-EGD-EKDMCRAMEKVYHIHKGNDYALDKVTFIFPGHEY 228 (311)
T ss_dssp ECTTCGGGCEEEEEETTEETTEE--------------CCCT-TSC-HHHHHHHHHHHHTTTGGGTTGGGGGEEEEESBCC
T ss_pred ecCCcCCcCCEEEEcCccccCCc--------------CCCC-CCC-HHHHHHHHHHHHHhhhcccccCCCCeEEEeCCCc
Confidence 6532 014 79999999765422 1100 000 01134555566667 554 79999996
Q ss_pred ccc
Q 021237 293 DLD 295 (315)
Q Consensus 293 ~f~ 295 (315)
...
T Consensus 229 ~~~ 231 (311)
T 2p18_A 229 TSG 231 (311)
T ss_dssp HHH
T ss_pred hhh
Confidence 643
No 63
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.23 E-value=2.4e-11 Score=109.27 Aligned_cols=140 Identities=15% Similarity=0.118 Sum_probs=85.4
Q ss_pred EEEEeCeEEEEEeCCcEEEEccccCCCC----C-CCCCccccC--CccccC--CCCCCCCCCCCEEEEcCCCCCCCChhc
Q 021237 81 LTYLEGNSWLWDLDGVKVLVDPILVGNL----D-FGIPWLFDA--GKKFLK--SFQLSDLPQVDCLLITQSLDDHCHLKT 151 (315)
Q Consensus 81 itwlGhss~lI~~~g~~ILiDP~~~g~~----s-~p~~~~~~~--~~~~~~--~~~~~~lp~iD~VlISH~H~DHld~~t 151 (315)
...++.+||||+.++..|||||..+... . ++....... ..+.+. ++++ .+||+|+|||.|+|| +++
T Consensus 30 ~~~~~~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~i~~VilTH~H~DH--~gg 104 (274)
T 3aj3_A 30 EVRFPVYSILIEHAEGRFLIDTGYDYDHVMKVLPFEKPIQEKHQTIPGALGLLGLEP---RDIDVVVNSHFHFDH--CGG 104 (274)
T ss_dssp EEEEEEEEEEEEETTEEEEECCCCCHHHHHHHCGGGCCBCCGGGSHHHHHHHTTCCG---GGCCEEECSCCSGGG--TTT
T ss_pred EEEeeEEEEEEEeCCccEEEECCCCcccccCccccCCcccCccccHHHHHHHcCCCH---HHCCEEEecCcCccc--CCc
Confidence 3567889999999999999999543210 0 000000000 000111 1222 268999999999999 577
Q ss_pred HHHhhhhCCCceEEEcCChHHHHhhc----------------------------------CCceEEeCCCceEEecccCC
Q 021237 152 LKPLSKMSPNLKVIATPNAKTLLDPL----------------------------------FQNVTYVEPGQSSEIEGRNG 197 (315)
Q Consensus 152 l~~l~~~~p~~~v~~~p~~~~~l~~~----------------------------------~~~i~~l~~~~~~~l~~~~g 197 (315)
+..| +++++++++.....+... ..++..++ +.++++ +
T Consensus 105 ~~~~----~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~---g 175 (274)
T 3aj3_A 105 NKYF----PHAKKICHRSEVPQACNPQPFEHLGYSDLSFSAEAAEARGATAQLLEGTTRANSTFEGID--GDVDLA---R 175 (274)
T ss_dssp GGGC----TTSEEEEETTHHHHHHSCCGGGTTTTCCCTTCHHHHHHHTCGGGCCTTCCSTTSCEEEEC--SSEEEE---T
T ss_pred hhhC----CCCEEEECHHHHHHHhCcCCccccccChhhhccccccccccccccccccccCCCCceEcC--CccccC---C
Confidence 7766 378999988876644210 01234444 245665 2
Q ss_pred CcEEEEEeecCCcCCCCCCCccEEEEEecCCceeEEEcCCCCCcc
Q 021237 198 SKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQ 242 (315)
Q Consensus 198 ~~l~i~~~p~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~ 242 (315)
.+++..+|++..| ..++.++.++ +.+++|+||+.+..
T Consensus 176 -~~~v~~~pGHt~g------~~~~~~~~~~-~~~~lf~GD~~~~~ 212 (274)
T 3aj3_A 176 -GVKLISTPGHSIG------HYSLLVEFPR-RKPILFTIDAAYTQ 212 (274)
T ss_dssp -TEEEEECTTSSTT------CEEEEECCSS-SCCEEEEETTCSSH
T ss_pred -EEEEEECCCCCce------eeEEEEECCC-CCEEEEEechhhhH
Confidence 4898888885333 4677776531 24899999998865
No 64
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.18 E-value=3.2e-11 Score=105.50 Aligned_cols=167 Identities=14% Similarity=0.105 Sum_probs=102.0
Q ss_pred EeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccC--CCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCC
Q 021237 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLK--SFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPN 161 (315)
Q Consensus 84 lGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~--~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~ 161 (315)
.+.|||+|+.++..|||||....... .+ .+.+. ++++ .+||+|+|||.|+|| ++++..+. +
T Consensus 33 ~~~n~~li~~~~~~iLID~G~~~~~~----~l----~~~l~~~g~~~---~~i~~ViiTH~H~DH--~gg~~~~~----~ 95 (221)
T 1ztc_A 33 HFSTVVYLEHKDRRIIIDPGNLSSMD----EL----EEKFSELGISP---DDITDVLFTHVHLDH--IFNSVLFE----N 95 (221)
T ss_dssp CBCCEEEEEETTEEEEECCCCGGGHH----HH----HHHHHHHTCCG---GGCCEEECSCCCHHH--HGGGGGCT----T
T ss_pred CceEEEEEEeCCeEEEEECCCCcchH----HH----HHHHHHcCCCH---HHCcEEEEcCCcccc--CCchhhCC----C
Confidence 56799999999999999994321000 00 01111 2222 268999999999999 68877765 5
Q ss_pred ceEEEcCChHH-HHhhc--------------CCceEEeCCCceEEecccCCCcEEEEEeecCCcCCCCCCCccEEEEEec
Q 021237 162 LKVIATPNAKT-LLDPL--------------FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSS 226 (315)
Q Consensus 162 ~~v~~~p~~~~-~l~~~--------------~~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~g~~~~~~~~g~~i~~~ 226 (315)
+++|+++.... .++.+ ..++..++.++.+. + +++++..+|++..| ..++.++.+
T Consensus 96 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~-~----~~~~v~~~pGHt~g------~~~~~~~~~ 164 (221)
T 1ztc_A 96 ATFYVHEVYKTKNYLSFGTIVGRIYSKVISSWKNVVLLKGEESLF-D----EKVKVFHTPWHARE------HLSFLLDTE 164 (221)
T ss_dssp CEEEEEGGGGGSCGGGGCHHHHHHHHHHHHTCCSEEEECSCCEET-T----TTEEEEECCSSSTT------CEEEEEEET
T ss_pred CEEEEeHHHhhhhhhhhccchhhhhhhccccccceEEeCCCCEEE-C----CeEEEEEcCCCCcc------cEEEEEEcC
Confidence 78888776211 11111 13567777776543 2 37999889875332 478888774
Q ss_pred CCceeEEEcCCCCCccccccccCCcEEEeccCCCcCCCccccCCH-HHHHHHHHHcCCCEEEEeecccccc
Q 021237 227 QGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQ-EDAVKLAKLLHAKFIVPMKNGDLDS 296 (315)
Q Consensus 227 ~~~~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~-eea~~~~~~l~~k~~ip~H~g~f~~ 296 (315)
+ +.+++|+||+.+..... -+. .+ +.. ... ...++. +.+ +++++|.|...+..
T Consensus 165 ~-~~~vlftGD~~~~~~~~---------~d~-~~---~~~--s~~~~~~l~~-~~l-~~~i~pgHg~~~~~ 217 (221)
T 1ztc_A 165 N-AGRVLITGDITPNRLSY---------YDI-IK---GYG--SVQVKNFLDR-VGR-IDLLVFPHDAPLKP 217 (221)
T ss_dssp T-TEEEEECGGGSCSHHHH---------HHH-HH---TCS--CHHHHHHHHH-HCC-CSEEECSSSCCBCC
T ss_pred C-CCeEEEEeCcccccccC---------CCH-HH---HHh--hhHhHHHHHh-ccC-CCEEEeCCCchHhh
Confidence 3 14899999998754310 000 11 111 111 222555 556 89999999987654
No 65
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=99.16 E-value=1.2e-11 Score=109.32 Aligned_cols=166 Identities=14% Similarity=0.067 Sum_probs=100.3
Q ss_pred eCeEEEEEeC-CcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCce
Q 021237 85 EGNSWLWDLD-GVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLK 163 (315)
Q Consensus 85 Ghss~lI~~~-g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~~ 163 (315)
+.|||+|+.+ +..+||||..+.... .-+ ...+... . +...+ +|++||.|.|| ++++..+.+ . +++
T Consensus 29 ~~n~~li~~~~~~~iLiD~G~~~~~~---~~l----~~~l~~~-~-~~~~~-~vi~TH~H~DH--~gg~~~l~~-~-~~~ 94 (246)
T 2fhx_A 29 SSNVLVAKMLDGTVVIVSSPFENLGT---QTL----MDWVAKT-M-KPKKV-VAINTHFHLDG--TGGNEIYKK-M-GAE 94 (246)
T ss_dssp TEEEEEEECTTSEEEEESCCSSHHHH---HHH----HHHHHHH-H-CCSEE-EEECCSSSHHH--HTTHHHHHH-T-TCE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCHHHH---HHH----HHHHHHh-c-CCCcE-EEEeCCCCccc--cChHHHHhh-c-CCE
Confidence 5689999875 468999994321000 000 0001010 0 12234 79999999999 688888876 3 789
Q ss_pred EEEcCChHHHHhhc-----------C-----------------CceEEeCCCceEEecccCCCcEEEEE---eecCCcCC
Q 021237 164 VIATPNAKTLLDPL-----------F-----------------QNVTYVEPGQSSEIEGRNGSKLRVKA---TAGPVLGP 212 (315)
Q Consensus 164 v~~~p~~~~~l~~~-----------~-----------------~~i~~l~~~~~~~l~~~~g~~l~i~~---~p~~~~g~ 212 (315)
+++++.....+++. + .++..++.+++++++ +.++++ +|+|..|
T Consensus 95 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g-----~~~i~~~~~~pGHt~g- 168 (246)
T 2fhx_A 95 TWSSDLTKQLRLEENKKDRIKAAEFYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFS-----NELVEVSFPGPAHSPD- 168 (246)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTCCCCCSEEECTTTCEEEEET-----TEEEEEECCCCSSSTT-
T ss_pred EEEcHHHHHHHHhcchhhhHHHHhhhccccchhhhcccccCCCCceeecCCCCEEEEC-----CEEEEEEeCCCCCCCC-
Confidence 99988765543210 0 123356778888886 555544 4554322
Q ss_pred CCCCCccEEEEEecCCceeEEEcCCCCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHcCCCEEEEeecc
Q 021237 213 PWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNG 292 (315)
Q Consensus 213 ~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l~~k~~ip~H~g 292 (315)
..++.+. + .+++|+||+.+.... + +.+..+ -....++++.+++++++.++|.|..
T Consensus 169 -----~~~~~~~--~--~~~lf~GD~~~~~~~--------------~-~~~~~~-~~~~~~sl~~l~~l~~~~i~pgHg~ 223 (246)
T 2fhx_A 169 -----NVVVYFP--K--KKLLFGGCMIKPKEL--------------G-YLGDAN-VKAWPDSARRLKKFDAKIVIPGHGE 223 (246)
T ss_dssp -----CCEEEET--T--TTEEEEETTCCSSCC--------------C-CCTTCC-TTTHHHHHHHGGGSCCSEEEESBSC
T ss_pred -----CEEEEEc--C--CCEEEECCEeccCCC--------------C-CCCCCC-HHHHHHHHHHHHhCCCCEEECCCCC
Confidence 3455543 2 379999999874211 1 011011 1245677888888899999999998
Q ss_pred ccc
Q 021237 293 DLD 295 (315)
Q Consensus 293 ~f~ 295 (315)
.+.
T Consensus 224 ~~~ 226 (246)
T 2fhx_A 224 WGG 226 (246)
T ss_dssp CBS
T ss_pred cCC
Confidence 876
No 66
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=99.16 E-value=9.3e-11 Score=101.06 Aligned_cols=170 Identities=17% Similarity=0.210 Sum_probs=105.7
Q ss_pred EeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCce
Q 021237 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLK 163 (315)
Q Consensus 84 lGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~~ 163 (315)
++.+||+|+.++..+|||| |... + ... +. ++++.+|++|++||. || .+++..+.+++ +++
T Consensus 22 ~~~n~~li~~~~~~iliD~---g~~~-~-~~~-----~~-----l~~~g~i~~ii~TH~--DH--~gg~~~~~~~~-~a~ 81 (201)
T 2p97_A 22 IDFNGFAWIRPEGNILIDP---VALS-N-HDW-----KH-----LESLGGVVWIVLTNS--DH--VRSAKEIADQT-YTK 81 (201)
T ss_dssp EEEEEEEECCTTCCEEESC---CCCC-H-HHH-----HH-----HHHTTCCSEEECSSG--GG--CTTHHHHHHHS-CCE
T ss_pred cceeEEEEEeCCeeEEEEC---CCCc-H-HHH-----HH-----HHhcCCCCEEEECCc--hh--hhhHHHHHHhc-CCE
Confidence 5789999999888999999 4221 1 001 11 112237899999999 99 58899998876 589
Q ss_pred EEEcCChHHHHhhcCCceEEeCCCceEEecccCCCcEEEEEee-cCCcCCCCCCCccEEEEEecCCceeEEEcCCCCCcc
Q 021237 164 VIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATA-GPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQ 242 (315)
Q Consensus 164 v~~~p~~~~~l~~~~~~i~~l~~~~~~~l~~~~g~~l~i~~~p-~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~ 242 (315)
+++++.....++.. ....++.++++ . .++++..+| +|..| ..++.+. + +++|+||+.+..
T Consensus 82 v~~~~~~~~~~~~~--~~~~~~~g~~~--~----~~~~~~~~p~gHt~g------~~~~~~~----~-~~lf~GD~~~~~ 142 (201)
T 2p97_A 82 IAGPVAEKENFPIY--CDRWLSDGDEL--V----PGLKVMELQGSKTPG------ELALLLE----E-TTLITGDLVRAY 142 (201)
T ss_dssp EEEEGGGTTSCSSC--CSEEECTTCBS--S----TTEEEEEECSSSSTT------EEEEEET----T-TEEEECSSEEBS
T ss_pred EEEcHhHhhhhccc--CceecCCCCEE--c----ceEEEEECCCCCCCC------cEEEEEc----C-CEEEECcccccc
Confidence 99988765554421 13556666643 2 269999999 65322 3455443 2 699999987654
Q ss_pred ccccccCCcEEEeccCCCcCCCccccCCHH---HHHHHHHH-cCCCEEEEeeccccc--ccchhHHHHh
Q 021237 243 NFLEKERSDIIITPVIKQLLPKFTLVSGQE---DAVKLAKL-LHAKFIVPMKNGDLD--SKGFLASIIQ 305 (315)
Q Consensus 243 ~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~e---ea~~~~~~-l~~k~~ip~H~g~f~--~~~~~~~~~~ 305 (315)
.. +..+ +.+ +. ...+.+ ++++.+++ +++++++|.|...+. ..+.++++++
T Consensus 143 ~~---g~~~--~~~------~~--~~~~~~~~~~sl~~l~~l~~~~~v~pgHg~~~~~~~~~~l~~~~~ 198 (201)
T 2p97_A 143 RA---GGLE--ILP------DE--KLMNKQKVVASVRRLAALEKVEAVLVGDGWSVFRDGRDRLKELVA 198 (201)
T ss_dssp ST---TSCE--ECC------GG--GCSCHHHHHHHHHHHHTCTTCCEEEESBBCCBCSCHHHHHHHHHH
T ss_pred CC---Cccc--cCC------cc--ccCCHHHHHHHHHHHHhcCCCCEEEeCCCcceecCHHHHHHHHHH
Confidence 11 1111 000 01 112343 45555566 589999999996553 3456665554
No 67
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.08 E-value=7.7e-11 Score=106.41 Aligned_cols=169 Identities=14% Similarity=0.120 Sum_probs=97.0
Q ss_pred EeCeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCC-CCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCc
Q 021237 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSF-QLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNL 162 (315)
Q Consensus 84 lGhss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~-~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~ 162 (315)
++.|||+|..++..+||||.++.... ++....+ ...++ +|++|++||.|+|| .+++..|+++ ++
T Consensus 73 ~~~N~ylv~~~~~~ilIDtg~~~~~~----------~~l~~~i~~~~~~-~I~~Ii~TH~H~DH--~gg~~~l~~~--~~ 137 (270)
T 4eyb_A 73 VASNGLIVRDGGRVLVVDTAWTDDQT----------AQILNWIKQEINL-PVALAVVTHAHQDK--MGGMDALHAA--GI 137 (270)
T ss_dssp EEEEEEEEEETTEEEEESCCSSHHHH----------HHHHHHHHHHTCC-CEEEEEECSSSHHH--HTTHHHHHHT--TC
T ss_pred cceEEEEEEECCEEEEEeCCCCHHHH----------HHHHHHHHHhcCC-ceEEEEeCCCChhh--cCcHHHHHHC--CC
Confidence 34789999999999999994431110 0100011 01122 78999999999999 7999999875 79
Q ss_pred eEEEcCChHHHHhhcCC----ceEE------eCCCceEEecccCCCcEEEE-EeecCCcCCCCCCCccEEEEEecCCcee
Q 021237 163 KVIATPNAKTLLDPLFQ----NVTY------VEPGQSSEIEGRNGSKLRVK-ATAGPVLGPPWQRPENGYLVNSSQGQLT 231 (315)
Q Consensus 163 ~v~~~p~~~~~l~~~~~----~i~~------l~~~~~~~l~~~~g~~l~i~-~~p~~~~g~~~~~~~~g~~i~~~~~~~~ 231 (315)
++++.+.....++..+. .... ++.++.... +++++. ..|++..| .. ++..+. .+
T Consensus 138 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~pgHT~g------~~--~~~~~~--~~ 202 (270)
T 4eyb_A 138 ATYANALSNQLAPQEGMVAAQHSLTFAANGWVEPATAPNF-----GPLKVFYPGPGHTSD------NI--TVGIDG--TD 202 (270)
T ss_dssp EEEEEHHHHHHGGGGTCCCCSEEECBCTTSBBCGGGSTTC-----TTEEEECCCSSSSSS------CC--EEEETT--SS
T ss_pred eEEECHHHHHHHHhcCccccccccCCCCceeecCceeeec-----CceeEEecccccCCC------CE--EEEecC--Cc
Confidence 99999888777665421 1111 111111222 245442 33554322 22 333332 37
Q ss_pred EEEcCCCCCccccccccCCcEEEeccCCCcCCCccccCCHHHHHHHHHHc--CCCEEEEeeccccc
Q 021237 232 LYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--HAKFIVPMKNGDLD 295 (315)
Q Consensus 232 i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l--~~k~~ip~H~g~f~ 295 (315)
++|+||+.+....... + +.+..+ .....++++.++.. ++++++|.|....+
T Consensus 203 vLfsGD~l~~~~~~~~-----------~-~~~~~~-~~~~~~Sl~~l~~~~~d~~~v~PGHG~p~~ 255 (270)
T 4eyb_A 203 IAFGGCLIKDSKAKSL-----------G-NLGDAD-TEHYAASARAFGAAFPKASMIVMSHSAPDS 255 (270)
T ss_dssp EEECTTTCCCTTCSCC-----------C-CCTTCC-TTTHHHHHHHHHHHSTTCCEEECSSSCCBC
T ss_pred EEEEeCeecCCCCCCc-----------C-CCCCCC-HHHHHHHHHHHHhhCCCCcEEEcCCCCCCC
Confidence 9999998764432110 1 111111 11345677766664 67899999986543
No 68
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=99.02 E-value=1.7e-10 Score=105.08 Aligned_cols=182 Identities=15% Similarity=0.158 Sum_probs=103.4
Q ss_pred CeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCceEE
Q 021237 86 GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKVI 165 (315)
Q Consensus 86 hss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~~v~ 165 (315)
.+|++|+.++.+||||| |... .+. ..+..+.. +..+||+|++||.|+|| .+++..+.++++++++|
T Consensus 33 g~s~li~~~~~~iLiD~---G~~~---~~~-----~~l~~~g~-~~~~i~~v~lTH~H~DH--~ggl~~~~~~~~~~~v~ 98 (284)
T 2p4z_A 33 GLSLLLKKGNKEIVVDT---GQSE---NFI-----KNCGLMGI-DVGRIKKVVLTHGHYDH--IGGLKGLLERNPEVKIY 98 (284)
T ss_dssp SCEEEEEETTEEEEECC---CSST---HHH-----HHHHHTTC-CGGGCCEEECCCSCHHH--HTTHHHHHHHCTTCEEE
T ss_pred EEEEEEEECCeEEEEeC---CCCH---HHH-----HHHHHcCC-ChhhCCEEEECCCCchh--hccHHHHHHHcCCCcee
Confidence 36899999999999999 4321 000 11111111 12378999999999999 78998887776789999
Q ss_pred EcCChHH-HHhhc--------C----------CceEEeCCCceEEecccCCCc-EEEEEeecCCcCCCCCCCccEEEEEe
Q 021237 166 ATPNAKT-LLDPL--------F----------QNVTYVEPGQSSEIEGRNGSK-LRVKATAGPVLGPPWQRPENGYLVNS 225 (315)
Q Consensus 166 ~~p~~~~-~l~~~--------~----------~~i~~l~~~~~~~l~~~~g~~-l~i~~~p~~~~g~~~~~~~~g~~i~~ 225 (315)
+++...+ .+... + .++..++ +..++. .+ +.+..+|.++..... ....|.++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~i~----~gi~~i~~~~~~h~~~~~--~g~~~~~~~ 170 (284)
T 2p4z_A 99 THKEILNKKYAMRKGGQFEEIGFDLSFYEKYKNNFVLID--KDAEIE----EGFYVITNTDITYDNEFT--TKNFFVEKE 170 (284)
T ss_dssp EEGGGGSCEEEECSSSCEEECSCCHHHHHHHGGGEEEES--SCEEEE----TTEEEECSCCCCSCCHHH--HTTEEEEET
T ss_pred cCHHHHHHHhccCccccccccccccchhhhcCceEEEeC--CCeEEe----CCEEEEeeeCCccccccC--CCceEEEcC
Confidence 9877643 22110 0 1233333 234553 23 333344443221100 011355542
Q ss_pred cCCceeEEEcCCCCCcccccc-ccCCc--EEEeccCC-------Cc----CC--C-----ccccC------CHHHHHHHH
Q 021237 226 SQGQLTLYYEPHCVYNQNFLE-KERSD--IIITPVIK-------QL----LP--K-----FTLVS------GQEDAVKLA 278 (315)
Q Consensus 226 ~~~~~~i~~sGDt~~~~~~~~-~~~~D--l~i~~~~g-------~~----~p--~-----~~~h~------~~eea~~~~ 278 (315)
+.|++|+ +.++... ....| +++..+.- .+ .+ . ...|+ ..+++++++
T Consensus 171 ------~~y~~D~-~~de~~~~~~~~dglvli~gcsH~Gi~n~l~~~~~~~~~~~i~~~igg~Hl~~~~~~~~~~a~~~~ 243 (284)
T 2p4z_A 171 ------GKRIPDK-FLDEVFVVVKEEDGINVVTGCSHAGILNILETARNRFGVSYIKSLIGGFHLRGMEEEKVKDIARKI 243 (284)
T ss_dssp ------TEEEECC-CTTCCEEEEEETTEEEEEESSCTTCHHHHHHHHHHHHTCSCBSEEEECCCCTTCCHHHHHHHHHHH
T ss_pred ------CCEecCC-CCCceEEEEEcCCcEEEEECCCCcCHHHHHHHHHHHcCCCceEEEEEcccCCCCCHHHHHHHHHHH
Confidence 2466785 3332222 23557 44543210 01 11 1 12377 789999999
Q ss_pred HHcCCCEEEEeecccccc
Q 021237 279 KLLHAKFIVPMKNGDLDS 296 (315)
Q Consensus 279 ~~l~~k~~ip~H~g~f~~ 296 (315)
+++++++++++|...+..
T Consensus 244 ~~~~~~~l~l~H~~~~~~ 261 (284)
T 2p4z_A 244 EEYGVKKVLTGHCTGIDE 261 (284)
T ss_dssp HHTTBCCEEECGGGCHHH
T ss_pred HcCCCCEEEeeCcCcHHH
Confidence 999999999999998654
No 69
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=98.97 E-value=7e-10 Score=112.22 Aligned_cols=172 Identities=12% Similarity=0.067 Sum_probs=99.3
Q ss_pred CeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCC-CCCCCCCEEEEcCCCCCCCChhcHHHhhhh----CC
Q 021237 86 GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQL-SDLPQVDCLLITQSLDDHCHLKTLKPLSKM----SP 160 (315)
Q Consensus 86 hss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~-~~lp~iD~VlISH~H~DHld~~tl~~l~~~----~p 160 (315)
.|||+|+.++..|||||..+.... +.....+.. -...+|++|++||.|.|| ++++..|.+. .+
T Consensus 123 ~N~ylI~~~~g~iLIDtG~~~~~a----------~~~l~~i~~~~~~~~I~~IIlTH~H~DH--~GG~~~l~~~~~~~~~ 190 (658)
T 2cfu_A 123 ANITFIRGDSGWIVVDTLTTPATA----------RAAYELVSRELGERPIRTVIYSHAHADH--FGGVRGLVEPQQVASG 190 (658)
T ss_dssp SCEEEEECSSSEEEECCCSSHHHH----------HHHHHHHHHHHCCCCEEEEECSBSCHHH--HTTGGGTCCHHHHHTT
T ss_pred eEEEEEEECCEEEEEECCCCHHHH----------HHHHHHHHhhCCCCCceEEEECCCChhh--hCCHHHHHhhhhccCC
Confidence 589999988889999994431100 000000100 011378999999999999 6888888652 46
Q ss_pred CceEEEcCChHHHHh----------------hcCC---------------------------ceEEe-CCCceEEecccC
Q 021237 161 NLKVIATPNAKTLLD----------------PLFQ---------------------------NVTYV-EPGQSSEIEGRN 196 (315)
Q Consensus 161 ~~~v~~~p~~~~~l~----------------~~~~---------------------------~i~~l-~~~~~~~l~~~~ 196 (315)
+++|++++...+++. .++. ....+ +.+++++++
T Consensus 191 ~a~V~a~~~~~~~~~~e~~~~g~~~~~r~~~~~g~~lp~~~~~~v~~~l~~~~~~g~~~~~~p~~~~~~dG~~l~lg--- 267 (658)
T 2cfu_A 191 AVQIIAPAGFMEAAIKENVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIEGEGEDLVLD--- 267 (658)
T ss_dssp SSEEEEETTHHHHHC---CTTHHHHHHHHHHHTTTTSCBSTTSBCCCSSSSCCCCSCCCCCCCSEEECTTEEEEEET---
T ss_pred CCEEEEchhHHHHHhhhhhhhhhHHHHHHHHHhccCCChhhhhhhhhcccccccCCCccCCCCcEEEecCceEEEEC---
Confidence 899999887544221 0110 11334 466777776
Q ss_pred CCcEEEEEeecCCcCCCCCCCccEEEEEecCCceeEEEcCCCCCccccccccCCcEEEeccCCCcCCCccccCCH---HH
Q 021237 197 GSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQ---ED 273 (315)
Q Consensus 197 g~~l~i~~~p~~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~i~~~~g~~~p~~~~h~~~---ee 273 (315)
+..+++..+|+|+.. ...++.+. + .+++|+||..+.. ...+. ...|.. ..++ .+
T Consensus 268 g~~l~vi~tPGHhTp-----g~i~~~~p--~--~~vLftGD~v~~~-~~~i~-------~~~g~~------~~d~~~~~~ 324 (658)
T 2cfu_A 268 GVPFTFQNTPGTESP-----AEMNIWLP--R--QKALLMAENVVGT-LHNLY-------TLRGAE------VRDALGWSK 324 (658)
T ss_dssp TEEEEEEECTTSSSS-----SBEEEEET--T--TTEEECTTTSCSS-CCCSS-------CTTCCC------CCCHHHHHH
T ss_pred CEEEEEEeCCCCCCC-----CcEEEEEC--C--CCEEEEecccccc-CCccc-------cCCCcc------cCCHHHHHH
Confidence 223666667775221 13445443 2 3799999987642 10000 000111 0123 35
Q ss_pred HHHHHHHc---CCCEEEEeeccccc
Q 021237 274 AVKLAKLL---HAKFIVPMKNGDLD 295 (315)
Q Consensus 274 a~~~~~~l---~~k~~ip~H~g~f~ 295 (315)
+++.++++ ++++++|.|...+.
T Consensus 325 sL~~l~~l~~l~~~~v~PGHg~p~~ 349 (658)
T 2cfu_A 325 YINQALHRFGRQAEVMFAVHNWPRW 349 (658)
T ss_dssp HHHHHHHHTGGGCSEEECSSSCCEE
T ss_pred HHHHHHHHhCCCCcEEEeCCCCccC
Confidence 55655555 89999999997653
No 70
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=98.17 E-value=1.5e-09 Score=109.68 Aligned_cols=73 Identities=16% Similarity=0.175 Sum_probs=48.6
Q ss_pred CeEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCC-CCCCCCEEEEcCCCCCCCChhcHHHhhhh----CC
Q 021237 86 GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLS-DLPQVDCLLITQSLDDHCHLKTLKPLSKM----SP 160 (315)
Q Consensus 86 hss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~-~lp~iD~VlISH~H~DHld~~tl~~l~~~----~p 160 (315)
.||++|+.++..|||||..+.... ++....+... ...+|++|++||.|.|| ++++..|.+. .+
T Consensus 133 ~N~~lI~~~~~~iLIDtG~~~~~a----------~~~l~~i~~~~~~~~I~~IilTH~H~DH--~gG~~~l~~~~~~~~~ 200 (668)
T 2yhe_A 133 ANMTIIEGDSGLVLIDTLTTAETA----------RAALDLYFQHRPKKPIVAVVYSHSHIDH--FGGARGIIDEADVKAG 200 (668)
Confidence 479999988889999995542111 0111111110 12378999999999999 6888888752 24
Q ss_pred CceEEEcCCh
Q 021237 161 NLKVIATPNA 170 (315)
Q Consensus 161 ~~~v~~~p~~ 170 (315)
+++|++++..
T Consensus 201 ~a~I~a~~~~ 210 (668)
T 2yhe_A 201 KVKVFAPSGF 210 (668)
Confidence 7888887764
No 71
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=98.20 E-value=3.8e-06 Score=75.63 Aligned_cols=180 Identities=19% Similarity=0.095 Sum_probs=94.2
Q ss_pred eEEEEEeCCcEEEEccccCCCCCCCCCccccCCccccCCCCCCCCCCCCEEEEcCCCCCCCChhcHHHhhhhCCCceEEE
Q 021237 87 NSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKVIA 166 (315)
Q Consensus 87 ss~lI~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~~~p~~~v~~ 166 (315)
.|+||+. |||||..+ . .+. +.+..+.++ +. |+|+|||.|+|| .+++..+ +++++|+
T Consensus 33 ~s~lie~----iLiD~G~~---~---~l~-----~~l~~~gi~--~~-~~IvlTH~H~DH--~ggl~~l----~~~~v~~ 88 (267)
T 3h3e_A 33 FSVLVDS----VLFDTGKS---D---VFL-----KNARKLGID--LP-KDVLISHGHYDH--AGGLLYL----SGKRVWL 88 (267)
T ss_dssp CEEEETT----EEECCCSS---S---HHH-----HHHHHTTCC--CC-SEEECSCSCHHH--HGGGGGC----CSCEEEE
T ss_pred eHHeeee----EEEECCCc---H---HHH-----HHHHHCCcC--cC-CEEEECCCChhh--hCCHHHh----cCCEEEE
Confidence 5788876 99999432 1 011 111111121 12 999999999999 7888888 3789999
Q ss_pred cCChHH-HHhh---c----------CCceEEeCCCceEEecccCCCcEEEEEeecCCc------------CC---CCCCC
Q 021237 167 TPNAKT-LLDP---L----------FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVL------------GP---PWQRP 217 (315)
Q Consensus 167 ~p~~~~-~l~~---~----------~~~i~~l~~~~~~~l~~~~g~~l~i~~~p~~~~------------g~---~~~~~ 217 (315)
.+.... .... . ..++..++ +..++. .++.++..|-... |. ..-..
T Consensus 89 ~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~v~--~~~eI~----pgv~~~g~~r~~~~e~~~~~~~~~~g~~~~D~~~d 162 (267)
T 3h3e_A 89 RKEALDQKYSGERYAGADWNEVLYYNTGKFVIE--RITEIG----KNMFLLGPANLRGKVPTGDFFVERNGERRKDLFED 162 (267)
T ss_dssp EGGGGSEEEETTEECCCCHHHHHHHSEEEEECS--SEEEEE----TTEEEECSCCCTTCCCCSCEEEESSSCEEECCCTT
T ss_pred CHHHHHhhhccccccCCCccHHHhcCCcEEEeC--CCeEEc----CCcEEeCCCCCcccccCCCceEEeCCccccCCCCC
Confidence 876532 1110 0 11333333 233443 2555543321100 00 00012
Q ss_pred ccEEEEEecCCceeEEEcCCCCCc--cc---ccccc--CCcEEEeccCCCcCCCccccCCHHHHHHHHHHcCCCEEEEee
Q 021237 218 ENGYLVNSSQGQLTLYYEPHCVYN--QN---FLEKE--RSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMK 290 (315)
Q Consensus 218 ~~g~~i~~~~~~~~i~~sGDt~~~--~~---~~~~~--~~Dl~i~~~~g~~~p~~~~h~~~eea~~~~~~l~~k~~ip~H 290 (315)
..+.+++++. .-|.++|-+..+ .- .++.. ++..++ +|--.-... --..+++++.++++++++++|+|
T Consensus 163 e~~Lvi~~~~--GlvvitGCsH~GI~Niv~~a~~~~g~~i~~vi---GGfHL~~~~-~~~l~~tl~~l~~~~~~~i~~~H 236 (267)
T 3h3e_A 163 EQTLVVRTKE--GLVVITGCSHRGIDNILLDIAETFNERIKMVV---GGFHLLKSS-DDEIEKIVKAFNELGVETVVPCH 236 (267)
T ss_dssp CCEEEEEETT--EEEEEESCCTTCHHHHHHHHHTTCSSCEEEEE---EECCCTTSC-HHHHHHHHHHHHHTTCCEEEEET
T ss_pred cEEEEEEcCC--cEEEEeCCCCcCHHHHHHHHHHHhCCCceEEE---eccccCCCC-HHHHHHHHHHHHhcCCCEEEEEC
Confidence 4566777643 268888865432 21 12221 222222 331110000 01247888899999999999999
Q ss_pred cccccccchhHH
Q 021237 291 NGDLDSKGFLAS 302 (315)
Q Consensus 291 ~g~f~~~~~~~~ 302 (315)
...+.....+++
T Consensus 237 CTg~~a~~~L~~ 248 (267)
T 3h3e_A 237 CTGERAVDIFKR 248 (267)
T ss_dssp TSCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 987654444433
No 72
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=51.71 E-value=8.8 Score=34.92 Aligned_cols=28 Identities=14% Similarity=0.088 Sum_probs=25.2
Q ss_pred cCCHHHHHHHHHHcCCCEEEEeeccccc
Q 021237 268 VSGQEDAVKLAKLLHAKFIVPMKNGDLD 295 (315)
Q Consensus 268 h~~~eea~~~~~~l~~k~~ip~H~g~f~ 295 (315)
|.+.+|..+.++.++|+.++|+|.|.+.
T Consensus 277 Ha~~~EL~~~~~~~~P~~~iPvh~ge~~ 304 (336)
T 3zdk_A 277 HSSYSELRAFVAALKPCQVVPIVSRRPC 304 (336)
T ss_dssp SCBHHHHHHHHHHHCCSCEEESCTTSCC
T ss_pred CCCHHHHHHHHHHhCCCEEEEEECCcCc
Confidence 8899999999999999999999966554
No 73
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=47.16 E-value=13 Score=36.29 Aligned_cols=44 Identities=14% Similarity=0.108 Sum_probs=32.2
Q ss_pred ccccCCHHHHHHHHHHcCCCEEEEeecccccccchhHHHHhhcCc
Q 021237 265 FTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGT 309 (315)
Q Consensus 265 ~~~h~~~eea~~~~~~l~~k~~ip~H~g~f~~~~~~~~~~~~~g~ 309 (315)
+..|.+.+|..++++.++|+.++|+|...-.+ ..++.+++..|-
T Consensus 380 ~SgHa~~~eL~~~i~~~~Pk~vipvHGe~~~~-~~~~~~~~~~g~ 423 (562)
T 3bk2_A 380 ASGHASQEELKLILNLTTPRFFLPWHGEVRHQ-MNFKWLAESMSR 423 (562)
T ss_dssp CCSSCCHHHHHHHHHHHCCSEEEEESBCHHHH-HHHHHHHHTSSS
T ss_pred EeCCCCHHHHHHHHHhcCCCEEEEEcCCHHHH-HHHHHHHHHcCC
Confidence 44599999999999999999999999654322 233445555563
No 74
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=31.91 E-value=30 Score=31.98 Aligned_cols=30 Identities=20% Similarity=0.263 Sum_probs=26.2
Q ss_pred cccCCHHHHHHHHHHcCCCEEEEeeccccc
Q 021237 266 TLVSGQEDAVKLAKLLHAKFIVPMKNGDLD 295 (315)
Q Consensus 266 ~~h~~~eea~~~~~~l~~k~~ip~H~g~f~ 295 (315)
..|.+.+|..++++.++||.++|+|...-.
T Consensus 380 SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~~ 409 (429)
T 2az4_A 380 SGHAIPEDLDKIIALIEPQVLVPIHTLKPE 409 (429)
T ss_dssp CSSCCHHHHHHHHHHHCCSEEEEESCSCGG
T ss_pred cCCCCHHHHHHHHHhhCCCEEEECCCCchh
Confidence 459999999999999999999999996443
No 75
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=31.57 E-value=22 Score=34.59 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=33.0
Q ss_pred ccccCCHHHHHHHHHHcCCCEEEEeecccccccchhHHHHhhcCc
Q 021237 265 FTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGT 309 (315)
Q Consensus 265 ~~~h~~~eea~~~~~~l~~k~~ip~H~g~f~~~~~~~~~~~~~g~ 309 (315)
+..|.+.+|..++++.++|+.++|+|...-.+..+ +++.+..|-
T Consensus 365 ~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~~~~~~-~~~a~~~G~ 408 (555)
T 3zq4_A 365 TSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMH-VKLATDCGI 408 (555)
T ss_dssp CCSSCCHHHHHHHHHHSCEEEEEEESBCHHHHHHH-HHHHHHTTC
T ss_pred EeCCCCHHHHHHHHHHhCCCEEEEcCCCHHHHHHH-HHHHHHcCC
Confidence 34599999999999999999999999875444333 335566664
No 76
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=20.54 E-value=61 Score=30.25 Aligned_cols=38 Identities=5% Similarity=0.162 Sum_probs=30.0
Q ss_pred cccCCHHHHHHHHHHcCCCEEEEeecccccccchhHHH
Q 021237 266 TLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASI 303 (315)
Q Consensus 266 ~~h~~~eea~~~~~~l~~k~~ip~H~g~f~~~~~~~~~ 303 (315)
..|.+.++.++.++.++|+.++++|...-....+.+.+
T Consensus 394 S~Had~~~l~~~i~~~~p~~v~~vHGe~~~~~~~~~~l 431 (459)
T 2i7t_A 394 SAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAAL 431 (459)
T ss_dssp SCCCCHHHHHHHHHHHCCSEEEEESSCHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHhcCCCeEEEeCCCHHHHHHHHHHH
Confidence 45999999999999999999999998765544444433
No 77
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=20.26 E-value=38 Score=22.84 Aligned_cols=28 Identities=32% Similarity=0.680 Sum_probs=18.7
Q ss_pred EEEEeeccccccc-chhHHHHhhcC-cccccc
Q 021237 285 FIVPMKNGDLDSK-GFLASIIQSEG-TVESFK 314 (315)
Q Consensus 285 ~~ip~H~g~f~~~-~~~~~~~~~~g-~~~~~~ 314 (315)
..+|.|-+ ++. +.+..+++.+| +.|||.
T Consensus 39 ~~vP~h~~--ei~~g~lk~Ilkqagl~~eef~ 68 (70)
T 1whz_A 39 VVVPFHSG--ELPKGTFKRILRDAGLTEEEFH 68 (70)
T ss_dssp EEEECSSS--SCCHHHHHHHHHHTTCCHHHHH
T ss_pred eEecCCcC--cCCHHHHHHHHHHcCCCHHHHh
Confidence 45676655 343 67788888888 667764
Done!