Query 021238
Match_columns 315
No_of_seqs 301 out of 1942
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 14:46:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021238.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021238hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kwu_A MUNC13-1; calcium bindi 99.9 3.3E-22 1.1E-26 164.3 17.9 123 4-126 7-146 (148)
2 2ep6_A MCTP2 protein; beta san 99.9 1.9E-22 6.4E-27 163.0 14.1 119 8-126 7-131 (133)
3 2fk9_A Protein kinase C, ETA t 99.9 3.5E-22 1.2E-26 166.2 12.3 114 11-126 26-156 (157)
4 3b7y_A E3 ubiquitin-protein li 99.9 3.4E-21 1.2E-25 159.2 16.6 120 8-127 14-153 (153)
5 2dmh_A Myoferlin; beta-sandwic 99.9 5.1E-21 1.7E-25 155.7 17.0 121 9-130 2-136 (140)
6 1gmi_A Protein kinase C, epsil 99.9 1.5E-21 5E-26 158.5 12.6 114 12-127 4-133 (136)
7 1wfj_A Putative elicitor-respo 99.9 2.4E-21 8.1E-26 156.9 13.6 122 8-129 4-132 (136)
8 3m7f_B E3 ubiquitin-protein li 99.9 1.3E-20 4.3E-25 159.6 16.8 120 9-128 3-142 (176)
9 3pyc_A E3 ubiquitin-protein li 99.8 2.7E-20 9.1E-25 150.1 15.5 113 12-125 3-131 (132)
10 1rlw_A Phospholipase A2, CALB 99.8 2.7E-20 9.4E-25 148.5 13.8 112 13-126 2-122 (126)
11 2r83_A Synaptotagmin-1; C2A-C2 99.8 4.5E-19 1.6E-23 160.8 19.9 166 11-187 16-204 (284)
12 2b3r_A Phosphatidylinositol-4- 99.8 1.2E-19 4E-24 147.0 13.6 103 12-115 18-131 (134)
13 2z0u_A WW domain-containing pr 99.8 3.3E-20 1.1E-24 154.1 10.1 104 11-114 40-155 (155)
14 2nq3_A Itchy homolog E3 ubiqui 99.8 1.8E-19 6.2E-24 152.3 14.8 117 11-128 33-162 (173)
15 3f04_A Synaptotagmin-1; C2A, c 99.8 8E-20 2.7E-24 149.2 10.5 104 11-114 31-142 (143)
16 2bwq_A Regulating synaptic mem 99.8 1.5E-19 5.1E-24 144.8 11.9 103 11-113 15-129 (129)
17 2d8k_A Synaptotagmin VII; exoc 99.8 2E-19 6.8E-24 146.6 12.5 105 11-115 23-136 (141)
18 3fdw_A Synaptotagmin-like prot 99.8 6.2E-20 2.1E-24 150.9 9.5 106 11-116 20-136 (148)
19 1rsy_A Synaptotagmin I; calciu 99.8 1.9E-19 6.6E-24 148.6 12.5 104 11-114 39-150 (152)
20 3rdl_A Protein kinase C alpha 99.8 2.3E-19 7.7E-24 145.1 11.3 103 12-114 14-124 (137)
21 1a25_A CALB, protein kinase C 99.8 3.2E-19 1.1E-23 146.7 11.9 102 13-114 30-139 (149)
22 1rh8_A Piccolo protein; beta-s 99.8 6.6E-20 2.3E-24 149.4 7.7 104 13-116 17-140 (142)
23 1dqv_A Synaptotagmin III; beta 99.8 1.8E-18 6.3E-23 158.1 17.8 168 10-188 16-207 (296)
24 2q3x_A Regulating synaptic mem 99.8 2.4E-19 8.2E-24 151.1 10.7 104 12-115 28-140 (171)
25 1wfm_A Synaptotagmin XIII; C2 99.8 7.9E-19 2.7E-23 142.7 13.4 102 11-115 23-133 (138)
26 3fbk_A RGS3, RGP3, regulator o 99.8 3.5E-19 1.2E-23 147.3 11.2 105 10-115 23-138 (153)
27 1ugk_A Synaptotagmin IV, KIAA1 99.8 6.8E-19 2.3E-23 142.8 12.5 105 11-115 19-134 (138)
28 1v27_A Regulating synaptic mem 99.8 2.9E-19 9.9E-24 145.2 10.3 105 11-115 18-134 (141)
29 2chd_A Rabphilin-3A, exophilin 99.8 6.6E-19 2.2E-23 143.6 11.6 104 11-114 26-140 (142)
30 3n5a_A Synaptotagmin-7; calciu 99.8 8.8E-19 3E-23 141.7 12.0 105 10-114 12-124 (138)
31 2cm5_A Rabphilin-3A; protein t 99.8 2.4E-19 8.3E-24 150.2 8.7 103 12-114 35-145 (166)
32 1tjx_A Similar to synaptotagmi 99.8 2E-18 6.9E-23 143.5 13.4 104 11-114 22-147 (159)
33 2dmg_A KIAA1228 protein; beta- 99.8 5.7E-19 1.9E-23 143.9 9.5 106 11-117 21-138 (142)
34 1w15_A Synaptotagmin IV; metal 99.8 6.4E-19 2.2E-23 145.5 8.9 104 11-114 27-138 (153)
35 2enp_A B/K protein; C2 type 1, 99.8 8.3E-19 2.8E-23 143.9 9.5 105 11-115 23-142 (147)
36 3nsj_A Perforin-1; pore formin 99.7 2.5E-17 8.7E-22 161.5 15.4 110 12-126 392-503 (540)
37 3jzy_A Intersectin 2; C2 domai 99.7 7.6E-17 2.6E-21 157.7 16.2 116 11-126 384-507 (510)
38 2cjt_A UNC-13 homolog A, MUNC1 99.7 1.9E-16 6.6E-21 127.6 12.0 85 12-102 3-88 (131)
39 2cjs_A UNC-13 homolog A, MUNC1 99.7 2E-16 6.8E-21 132.8 12.3 88 9-102 9-97 (167)
40 2r83_A Synaptotagmin-1; C2A-C2 99.7 8.6E-16 2.9E-20 139.1 13.9 103 12-114 148-272 (284)
41 1cjy_A CPLA2, protein (cytosol 99.6 1.5E-15 5.2E-20 153.4 10.9 104 11-115 15-127 (749)
42 1djx_A PLC-D1, phosphoinositid 99.6 1.3E-14 4.5E-19 145.0 16.7 106 12-118 495-609 (624)
43 1dqv_A Synaptotagmin III; beta 99.6 3.3E-16 1.1E-20 143.1 3.4 101 12-112 150-259 (296)
44 3l9b_A Otoferlin; C2-domain, b 99.6 3.5E-14 1.2E-18 114.3 13.9 113 11-128 18-141 (144)
45 3bxj_A RAS GTPase-activating p 99.5 2.9E-15 9.9E-20 145.8 -0.9 98 11-113 8-115 (483)
46 3pfq_A PKC-B, PKC-beta, protei 99.4 1.3E-13 4.5E-18 139.4 9.4 102 13-114 171-280 (674)
47 3qr0_A Phospholipase C-beta (P 99.2 7.4E-11 2.5E-15 120.5 15.4 97 13-118 649-756 (816)
48 3ohm_B 1-phosphatidylinositol- 99.2 9.4E-11 3.2E-15 120.4 13.5 105 13-126 724-844 (885)
49 2zkm_X 1-phosphatidylinositol- 99.2 1.3E-10 4.3E-15 119.0 14.0 98 12-118 676-784 (799)
50 1yrk_A NPKC-delta, protein kin 99.1 2E-09 6.9E-14 84.2 14.4 109 12-126 4-124 (126)
51 2enj_A NPKC-theta, protein kin 99.1 1.7E-09 5.7E-14 85.8 12.6 114 8-127 4-130 (138)
52 2hth_B Vacuolar protein sortin 96.6 0.052 1.8E-06 43.3 12.7 93 192-287 39-134 (140)
53 2cay_A VPS36 PH domain, vacuol 95.9 0.036 1.2E-06 44.5 8.6 85 192-285 52-136 (145)
54 1pfj_A TFIIH basal transcripti 93.9 0.31 1E-05 36.8 8.1 94 173-285 5-104 (108)
55 3l4c_A Dedicator of cytokinesi 92.3 2.3 7.9E-05 36.3 12.2 56 47-102 78-140 (220)
56 2wxf_A Phosphatidylinositol-4, 91.8 1 3.5E-05 46.7 11.3 87 13-102 216-324 (940)
57 1zsq_A Myotubularin-related pr 88.3 4.3 0.00015 39.3 11.7 73 171-243 9-88 (528)
58 3hhm_A Phosphatidylinositol-4, 87.9 2.6 8.7E-05 44.3 10.5 88 13-102 354-455 (1091)
59 2yf0_A Myotubularin-related pr 87.0 2.2 7.5E-05 41.1 8.8 76 189-280 23-98 (512)
60 1e7u_A Phosphatidylinositol 3- 86.8 4.2 0.00014 42.3 11.3 88 14-102 218-330 (961)
61 1lw3_A Myotubularin-related pr 86.3 6.1 0.00021 39.1 11.7 98 170-280 80-185 (657)
62 2y3a_A Phosphatidylinositol-4, 80.4 1.5 5E-05 46.3 4.7 69 13-84 352-430 (1092)
63 1t77_A Lipopolysaccharide-resp 70.9 5.2 0.00018 37.3 5.3 65 180-244 6-85 (414)
64 2yrb_A Protein fantom; beta sa 66.6 14 0.00049 29.6 6.4 90 10-102 14-116 (156)
65 1zyi_A Methylosome subunit pic 65.4 15 0.00052 29.9 6.4 51 191-244 42-94 (171)
66 3f04_A Synaptotagmin-1; C2A, c 55.0 33 0.0011 26.0 6.6 73 151-223 44-129 (143)
67 3fss_A Histone chaperone RTT10 54.7 39 0.0013 28.8 7.3 68 192-280 166-233 (237)
68 1ou8_A Stringent starvation pr 54.4 18 0.0006 27.2 4.6 38 192-229 59-96 (111)
69 1yfn_A Stringent starvation pr 52.6 19 0.00066 27.3 4.6 38 192-229 60-97 (118)
70 1fao_A Dual adaptor of phospho 51.7 68 0.0023 23.5 8.9 45 197-241 41-85 (126)
71 1ou9_A Stringent starvation pr 50.7 21 0.00072 27.5 4.6 38 192-229 59-96 (129)
72 2z0u_A WW domain-containing pr 48.9 29 0.001 27.2 5.5 71 153-223 55-141 (155)
73 1y5o_A TFB1, RNA polymerase II 48.7 84 0.0029 23.6 10.2 53 183-242 7-65 (115)
74 3f5r_A FACT complex subunit PO 41.2 1.5E+02 0.0051 24.4 9.6 77 190-284 35-117 (191)
75 2gcl_A Hypothetical 63.0 kDa p 39.6 91 0.0031 27.0 7.5 82 180-285 166-252 (261)
76 1w7p_D VPS36P, YLR417W; ESCRT- 38.0 6.8 0.00023 38.1 0.0 39 193-231 45-83 (566)
77 2cm5_A Rabphilin-3A; protein t 35.7 89 0.003 24.3 6.5 73 150-222 46-133 (166)
78 2dn6_A KIAA0640 protein; PH do 28.7 1.5E+02 0.0053 20.8 9.3 44 198-241 32-76 (115)
79 1eaz_A Tandem PH domain contai 28.3 1.3E+02 0.0046 21.5 6.1 44 198-241 38-84 (125)
80 2cod_A Centaurin-delta 1; ARF 26.7 1.7E+02 0.0059 20.7 8.5 40 198-241 33-72 (115)
No 1
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.89 E-value=3.3e-22 Score=164.34 Aligned_cols=123 Identities=28% Similarity=0.455 Sum_probs=105.3
Q ss_pred CCCCCCCCceeEEEEEEEEeecCCCCCCCCCCceEEEEEECCEEEEeecccCCCCCeecceEEEEecCCCcEEEEEEEec
Q 021238 4 FKGDPQTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDW 83 (315)
Q Consensus 4 ~~~~~~~~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~~~~rT~vi~~tlnP~w~e~f~f~v~~~~~~L~~~V~d~ 83 (315)
..-+..+...+.|.|+|++|++|+++|.+|.+||||++.++....+|+++++++||.|||+|.|.+......|.|+|||+
T Consensus 7 ~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~ 86 (148)
T 3kwu_A 7 SVLDGTSKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDE 86 (148)
T ss_dssp --------CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEEC
T ss_pred cccccccccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEEC
Confidence 33344555689999999999999999999999999999999999999999999999999999999987778999999999
Q ss_pred CCC-----------CCCceeEEEEEEcccCCCcccEEEEccC------CCceEEEEEEee
Q 021238 84 DII-----------WKSTVLGSVIVTVESEGQTGAVWYTLDS------PSGQVCLHIKTI 126 (315)
Q Consensus 84 d~~-----------~~dd~iG~~~i~l~~l~~~~~~w~~L~~------~~G~i~~~l~~~ 126 (315)
|.. +++++||++.++|.++......|++|.+ ..|+|++++.+.
T Consensus 87 d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 87 DDDIKSRVKQRFKRESDDFLGQTIIEVRTLSGEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp CCSHHHHHHTTTSSCSSEEEEEEEEEGGGCCSEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred CCCccccccccccCCCCccEEEEEEEHHHCcCCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 985 7899999999999999777889999974 248888887764
No 2
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.89 E-value=1.9e-22 Score=162.98 Aligned_cols=119 Identities=23% Similarity=0.421 Sum_probs=108.3
Q ss_pred CCCCceeEEEEEEEEeecCCCCCCCCCCceEEEEEECCEEEEeecccCCCCCeecceEEEEecCCCcEEEEEEEecCCCC
Q 021238 8 PQTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIW 87 (315)
Q Consensus 8 ~~~~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~~~~rT~vi~~tlnP~w~e~f~f~v~~~~~~L~~~V~d~d~~~ 87 (315)
.+..+.+.|.|+|++|++|++.|..|.+||||++.++....+|+++++++||.|||+|.|.+.+....|.|+|||+|..+
T Consensus 7 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~~ 86 (133)
T 2ep6_A 7 GDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDK 86 (133)
T ss_dssp CSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETTE
T ss_pred cccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCCC
Confidence 45678999999999999999999999999999999999999999999999999999999999877788999999999998
Q ss_pred CCceeEEEEEEcccCCCcccEEEEccC------CCceEEEEEEee
Q 021238 88 KSTVLGSVIVTVESEGQTGAVWYTLDS------PSGQVCLHIKTI 126 (315)
Q Consensus 88 ~dd~iG~~~i~l~~l~~~~~~w~~L~~------~~G~i~~~l~~~ 126 (315)
++++||++.+++.++......|++|.. ..|++++++.+.
T Consensus 87 ~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 87 PPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp EEEECCBCEEEGGGCCSSCCEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred CCCeeEEEEEEHHHccCCCceEEEeecCCCCCccceEEEEEEEEE
Confidence 999999999999999777789999964 348888888764
No 3
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.88 E-value=3.5e-22 Score=166.15 Aligned_cols=114 Identities=15% Similarity=0.212 Sum_probs=100.7
Q ss_pred CceeEEEEEEEEeecCCCCCC----------CCCCceEEEEEECCEE-EEeecccCCCCCeecceEEEEecCCCcEEEEE
Q 021238 11 NSAYLIKLELLAAKNLIGANL----------NGTSDPYAIITCGSEK-RFSSMVPGSRYPMWGEEFNFSVDELPVQIIVT 79 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~~d~----------~g~sDPyv~v~l~~~~-~rT~vi~~tlnP~w~e~f~f~v~~~~~~L~~~ 79 (315)
...|.|+|+|++|++|+++|. .|.+||||++.++... .+|+++++|+||.|||+|.|.+.+ ...|.|+
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~~~ 104 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLELA 104 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEEEE
Confidence 568999999999999999883 3679999999998765 599999999999999999999865 5689999
Q ss_pred EEecCCCCCCceeEEEEEEcccCC------CcccEEEEccCCCceEEEEEEee
Q 021238 80 IYDWDIIWKSTVLGSVIVTVESEG------QTGAVWYTLDSPSGQVCLHIKTI 126 (315)
Q Consensus 80 V~d~d~~~~dd~iG~~~i~l~~l~------~~~~~w~~L~~~~G~i~~~l~~~ 126 (315)
|||+|.+++|++||++.++|.++. ...+.|++|++ .|++++++.+.
T Consensus 105 V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~-~G~i~l~l~~~ 156 (157)
T 2fk9_A 105 VFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP-EGKVFVVITLT 156 (157)
T ss_dssp EEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS-SCEEEEEEEEC
T ss_pred EEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC-CcEEEEEEEEE
Confidence 999999999999999999999862 44688999987 89999988764
No 4
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.87 E-value=3.4e-21 Score=159.16 Aligned_cols=120 Identities=19% Similarity=0.328 Sum_probs=97.1
Q ss_pred CCCCceeEEEEEEEEeecCCCCCCCCCCceEEEEEECC------EEEEeecccCCCCCeecceEEEEecCCCcEEEEEEE
Q 021238 8 PQTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIY 81 (315)
Q Consensus 8 ~~~~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~------~~~rT~vi~~tlnP~w~e~f~f~v~~~~~~L~~~V~ 81 (315)
......+.|.|+|++|++|+.+|..|.+||||++++.. ...+|+++++++||.|||+|.|.+......|.|+||
T Consensus 14 ~~~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~ 93 (153)
T 3b7y_A 14 EDEENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVF 93 (153)
T ss_dssp SCCTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEE
T ss_pred cCCCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEE
Confidence 34567899999999999999999999999999999952 567999999999999999999999877788999999
Q ss_pred ecCCCCCCceeEEEEEEcccCCCcc--------cEEEEccCC------CceEEEEEEeec
Q 021238 82 DWDIIWKSTVLGSVIVTVESEGQTG--------AVWYTLDSP------SGQVCLHIKTIK 127 (315)
Q Consensus 82 d~d~~~~dd~iG~~~i~l~~l~~~~--------~~w~~L~~~------~G~i~~~l~~~~ 127 (315)
|+|..+++++||++.++|.++.... ..|++|.++ .|+|++++.+.+
T Consensus 94 d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 94 DENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp ECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred ECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 9999999999999999999873221 489999753 488888887753
No 5
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=5.1e-21 Score=155.70 Aligned_cols=121 Identities=18% Similarity=0.317 Sum_probs=104.4
Q ss_pred CCCceeEEEEEEEEeecCCCCCCCCCCceEEEEEECCEEEEeecccCCCCCeecceEEEEecC----CCcEEEEEEEecC
Q 021238 9 QTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDE----LPVQIIVTIYDWD 84 (315)
Q Consensus 9 ~~~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~~~~rT~vi~~tlnP~w~e~f~f~v~~----~~~~L~~~V~d~d 84 (315)
++...|.|.|+|++|++|+..|. |.+||||++++....++|+++++++||.|||+|.|.+.. ....|.|+|||+|
T Consensus 2 ~s~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d 80 (140)
T 2dmh_A 2 SSGSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFE 80 (140)
T ss_dssp CSCBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETT
T ss_pred CCCCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECC
Confidence 45678999999999999999998 999999999998888999999999999999999999863 3578999999999
Q ss_pred CCCCCceeEEEEEEcccC--CCcccEEEE---ccCC-----CceEEEEEEeecCcc
Q 021238 85 IIWKSTVLGSVIVTVESE--GQTGAVWYT---LDSP-----SGQVCLHIKTIKLPV 130 (315)
Q Consensus 85 ~~~~dd~iG~~~i~l~~l--~~~~~~w~~---L~~~-----~G~i~~~l~~~~~~~ 130 (315)
..++|++||++.++|.++ +.....|++ |... .|++++++.+.+.+.
T Consensus 81 ~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~~~ 136 (140)
T 2dmh_A 81 TIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPPSG 136 (140)
T ss_dssp CSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCCBS
T ss_pred CCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECCCC
Confidence 999999999999999997 344578988 5432 378888888876544
No 6
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.86 E-value=1.5e-21 Score=158.46 Aligned_cols=114 Identities=18% Similarity=0.238 Sum_probs=100.0
Q ss_pred ceeEEEEEEEEeecCCCCCCCCC-----------CceEEEEEECCEE-EEeecccCCCCCeecceEEEEecCCCcEEEEE
Q 021238 12 SAYLIKLELLAAKNLIGANLNGT-----------SDPYAIITCGSEK-RFSSMVPGSRYPMWGEEFNFSVDELPVQIIVT 79 (315)
Q Consensus 12 ~~g~L~V~Ii~A~~L~~~d~~g~-----------sDPyv~v~l~~~~-~rT~vi~~tlnP~w~e~f~f~v~~~~~~L~~~ 79 (315)
..|.|.|+|++|++|+++|.+++ +||||++.++... .+|+++++|+||.|||+|.|.+.+. ..|.|+
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~ 82 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELA 82 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEE
Confidence 46899999999999999886554 9999999997665 5999999999999999999998764 889999
Q ss_pred EEecCCCCCCceeEEEEEEcccCCC----cccEEEEccCCCceEEEEEEeec
Q 021238 80 IYDWDIIWKSTVLGSVIVTVESEGQ----TGAVWYTLDSPSGQVCLHIKTIK 127 (315)
Q Consensus 80 V~d~d~~~~dd~iG~~~i~l~~l~~----~~~~w~~L~~~~G~i~~~l~~~~ 127 (315)
|||+|..++|++||++.+++.++.. ..+.|++|.+ .|++++++.+..
T Consensus 83 V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~-~G~i~l~l~~~~ 133 (136)
T 1gmi_A 83 VFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP-EGKVYVIIDLSG 133 (136)
T ss_dssp EEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS-SCEEEEEEEEEE
T ss_pred EEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC-CeEEEEEEEEEe
Confidence 9999999999999999999998632 2378999987 799999998754
No 7
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.86 E-value=2.4e-21 Score=156.90 Aligned_cols=122 Identities=21% Similarity=0.361 Sum_probs=107.0
Q ss_pred CCCCceeEEEEEEEEeecCCCCCCCCCCceEEEEEECCEEEEeeccc-CCCCCeecceEEEEecCCCcEEEEEEEecCCC
Q 021238 8 PQTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVP-GSRYPMWGEEFNFSVDELPVQIIVTIYDWDII 86 (315)
Q Consensus 8 ~~~~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~~~~rT~vi~-~tlnP~w~e~f~f~v~~~~~~L~~~V~d~d~~ 86 (315)
.+..+.+.|.|+|++|++|+..|..|.+||||++++.....+|++++ +++||.|||+|.|.+.+....|.|+|||+|..
T Consensus 4 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~ 83 (136)
T 1wfj_A 4 GSSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVG 83 (136)
T ss_dssp CCCCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSC
T ss_pred CCCCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCC
Confidence 34567999999999999999999999999999999988889999998 89999999999999987778999999999999
Q ss_pred CCCceeEEEEEEcccC---CCcccEEEEccC---CCceEEEEEEeecCc
Q 021238 87 WKSTVLGSVIVTVESE---GQTGAVWYTLDS---PSGQVCLHIKTIKLP 129 (315)
Q Consensus 87 ~~dd~iG~~~i~l~~l---~~~~~~w~~L~~---~~G~i~~~l~~~~~~ 129 (315)
++|++||++.++|.++ +.....|++|.. ..|++++++.+.+..
T Consensus 84 ~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 84 TEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPSG 132 (136)
T ss_dssp TTTCCSEEEEEESHHHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEECC
T ss_pred CCCceEEEEEEEHHHhccCCCCCcEEEEeecCCccCEEEEEEEEEEeCC
Confidence 9999999999999987 333578999962 247788888777653
No 8
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.86 E-value=1.3e-20 Score=159.63 Aligned_cols=120 Identities=20% Similarity=0.312 Sum_probs=97.7
Q ss_pred CCCceeEEEEEEEEeecCCCCCCCCCCceEEEEEECC------EEEEeecccCCCCCeecceEEEEecCCCcEEEEEEEe
Q 021238 9 QTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYD 82 (315)
Q Consensus 9 ~~~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~------~~~rT~vi~~tlnP~w~e~f~f~v~~~~~~L~~~V~d 82 (315)
+....|.|.|+|++|++|+.++..|++||||++++.. ..++|+++++++||.|||+|.|.+......|.|+|||
T Consensus 3 ~~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d 82 (176)
T 3m7f_B 3 HNDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFD 82 (176)
T ss_dssp CCTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEE
T ss_pred CCCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEE
Confidence 4567899999999999999999999999999999953 5679999999999999999999998767889999999
Q ss_pred cCCCCCCceeEEEEEEcccCCCc-cc-------EEEEccC------CCceEEEEEEeecC
Q 021238 83 WDIIWKSTVLGSVIVTVESEGQT-GA-------VWYTLDS------PSGQVCLHIKTIKL 128 (315)
Q Consensus 83 ~d~~~~dd~iG~~~i~l~~l~~~-~~-------~w~~L~~------~~G~i~~~l~~~~~ 128 (315)
+|.++++++||++.++|.++... .. .|++|.+ ..|+|++++.+.+.
T Consensus 83 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 83 ENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp CC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 99999999999999999997322 11 7999975 25889999998876
No 9
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.85 E-value=2.7e-20 Score=150.07 Aligned_cols=113 Identities=24% Similarity=0.386 Sum_probs=96.6
Q ss_pred ceeEEEEEEEEeecCCCCCCCCCCceEEEEEECC--EEEEeecccCCCCCeecceEEEEecCCCcEEEEEEEecCCCCC-
Q 021238 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS--EKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWK- 88 (315)
Q Consensus 12 ~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~--~~~rT~vi~~tlnP~w~e~f~f~v~~~~~~L~~~V~d~d~~~~- 88 (315)
....|+|+|++|++|+++|..|.+||||+++++. ...+|+++++++||.|||+|.|.+.... .|.|+|||+|..++
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~~~ 81 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIHKK 81 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTTSS
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCCCC
Confidence 4678999999999999999999999999999964 6789999999999999999999997643 49999999998876
Q ss_pred --CceeEEEEEEcccC---CCcccEEEEccCC--------CceEEEEEEe
Q 021238 89 --STVLGSVIVTVESE---GQTGAVWYTLDSP--------SGQVCLHIKT 125 (315)
Q Consensus 89 --dd~iG~~~i~l~~l---~~~~~~w~~L~~~--------~G~i~~~l~~ 125 (315)
|++||++.+++.++ ......|++|..+ .|+|++++..
T Consensus 82 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 89999999998876 4455789999753 4777776653
No 10
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.84 E-value=2.7e-20 Score=148.51 Aligned_cols=112 Identities=20% Similarity=0.362 Sum_probs=95.0
Q ss_pred eeEEEEEEEEeecCCCC---CCCCCCceEEEEEECC---EEEEeecccCCCCCeecceEEEEec-CCCcEEEEEEEecCC
Q 021238 13 AYLIKLELLAAKNLIGA---NLNGTSDPYAIITCGS---EKRFSSMVPGSRYPMWGEEFNFSVD-ELPVQIIVTIYDWDI 85 (315)
Q Consensus 13 ~g~L~V~Ii~A~~L~~~---d~~g~sDPyv~v~l~~---~~~rT~vi~~tlnP~w~e~f~f~v~-~~~~~L~~~V~d~d~ 85 (315)
.+.|.|+|++|++|+++ |..|.+||||+++++. ..++|+++++++||.|||+|.|.+. .....|.|+|||+|.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 57899999999999984 6679999999999964 6789999999999999999999995 456789999999998
Q ss_pred CCCCceeEEEEEEcccC--CCcccEEEEccCCCceEEEEEEee
Q 021238 86 IWKSTVLGSVIVTVESE--GQTGAVWYTLDSPSGQVCLHIKTI 126 (315)
Q Consensus 86 ~~~dd~iG~~~i~l~~l--~~~~~~w~~L~~~~G~i~~~l~~~ 126 (315)
. ++++||++.++|.++ +.....|++|.+ .|++.+.+.+.
T Consensus 82 ~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~~-~~~g~i~~~le 122 (126)
T 1rlw_A 82 V-MDETLGTATFTVSSMKVGEKKEVPFIFNQ-VTEMVLEMSLE 122 (126)
T ss_dssp S-CCEEEEEEEEEGGGSCTTCEEEEEEEETT-TEEEEEEEEEE
T ss_pred C-CCceeEEEEEEHHHccCCCcEEEEEEcCC-CceEEEEEEEE
Confidence 7 489999999999997 344568999986 45555555544
No 11
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.82 E-value=4.5e-19 Score=160.75 Aligned_cols=166 Identities=17% Similarity=0.279 Sum_probs=126.9
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCceEEEEEEC---CEEEEeecccCCCCCeecceEEEEecC---CCcEEEEEEEecC
Q 021238 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYDWD 84 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~---~~~~rT~vi~~tlnP~w~e~f~f~v~~---~~~~L~~~V~d~d 84 (315)
...+.|.|+|++|++|+++|..|.+||||++++. ....+|+++++++||.|||+|.|.+.. ....|.|+|||+|
T Consensus 16 ~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d 95 (284)
T 2r83_A 16 FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFD 95 (284)
T ss_dssp TTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECC
T ss_pred CCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECC
Confidence 4578999999999999999999999999999994 346799999999999999999999853 2578999999999
Q ss_pred CCCCCceeEEEEEEcccC--CCcccEEEEccCC-------CceEEEEEEeecCccccccccccccccccccccccccCCC
Q 021238 85 IIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP-------SGQVCLHIKTIKLPVNASRVMNGYAGANARRRASLDKQGP 155 (315)
Q Consensus 85 ~~~~dd~iG~~~i~l~~l--~~~~~~w~~L~~~-------~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~ 155 (315)
.++++++||++.++|.++ +.....|++|.+. .|++.+.+.+.+... ......+++..+..
T Consensus 96 ~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~~~-----------~l~v~v~~a~~L~~ 164 (284)
T 2r83_A 96 RFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAG-----------KLTVVILEAKNLKK 164 (284)
T ss_dssp SSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEETTTT-----------EEEEEEEEEESCCC
T ss_pred CCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecCcCC-----------ceEEEEEEeECCCC
Confidence 999999999999999997 3456789999642 477777776654211 11112223455556
Q ss_pred cccccCCCCceeeccCCc--------ccceeecceeeeee
Q 021238 156 TVVHQKPGPLQTIFNLLP--------DEFVELSYSCVIER 187 (315)
Q Consensus 156 ~~~~~k~~~f~~~F~lp~--------~E~l~~~~~c~l~~ 187 (315)
.+...++++|.++.-.+. .+...++.++.|..
T Consensus 165 ~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne 204 (284)
T 2r83_A 165 MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNE 204 (284)
T ss_dssp CSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEE
T ss_pred cCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEce
Confidence 666677889988874332 23455667777765
No 12
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.82 E-value=1.2e-19 Score=146.95 Aligned_cols=103 Identities=15% Similarity=0.310 Sum_probs=90.5
Q ss_pred ceeEEEEEEEEeecCCCCCCCCCCceEEEEEE-----CCEEEEeecccCCCCCeecceEEEE-ecC---CCcEEEEEEEe
Q 021238 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFS-VDE---LPVQIIVTIYD 82 (315)
Q Consensus 12 ~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l-----~~~~~rT~vi~~tlnP~w~e~f~f~-v~~---~~~~L~~~V~d 82 (315)
..+.|.|+|++|++|+. +..|.+||||++++ .....+|+++++++||.|||+|.|. +.. ....|.|+|||
T Consensus 18 ~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d 96 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLS 96 (134)
T ss_dssp ETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEE
T ss_pred cCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEE
Confidence 46889999999999997 77899999999998 3457799999999999999999999 752 35789999999
Q ss_pred cCCCCCCceeEEEEEEcccCC--CcccEEEEccCC
Q 021238 83 WDIIWKSTVLGSVIVTVESEG--QTGAVWYTLDSP 115 (315)
Q Consensus 83 ~d~~~~dd~iG~~~i~l~~l~--~~~~~w~~L~~~ 115 (315)
+|..+++++||++.++|.++. .....|++|.++
T Consensus 97 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 131 (134)
T 2b3r_A 97 AESLRENFFLGGITLPLKDFNLSKETVKWYQLTAA 131 (134)
T ss_dssp CCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC-
T ss_pred CCCCCCCcEEEEEEEEhhhccCCCCcceeEECCCc
Confidence 999999999999999999973 456789999863
No 13
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.82 E-value=3.3e-20 Score=154.13 Aligned_cols=104 Identities=14% Similarity=0.124 Sum_probs=91.7
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCceEEEEEECC------EEEEeecccCCCCCeecceEEEEecC---CCcEEEEEEE
Q 021238 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIY 81 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~------~~~rT~vi~~tlnP~w~e~f~f~v~~---~~~~L~~~V~ 81 (315)
...+.|.|+|++|++|+++|.+|.+||||++++.. .+++|+++++|+||.|||+|.|.+.. ....|.|+||
T Consensus 40 ~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~ 119 (155)
T 2z0u_A 40 EKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVC 119 (155)
T ss_dssp TTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEE
T ss_pred CCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEE
Confidence 35678999999999999999999999999999943 26799999999999999999999853 2567999999
Q ss_pred ecCCCCCCceeEEEEEEcccC---CCcccEEEEccC
Q 021238 82 DWDIIWKSTVLGSVIVTVESE---GQTGAVWYTLDS 114 (315)
Q Consensus 82 d~d~~~~dd~iG~~~i~l~~l---~~~~~~w~~L~~ 114 (315)
|+|..+++++||++.++|.++ ......|++|.+
T Consensus 120 d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~~ 155 (155)
T 2z0u_A 120 TTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLLS 155 (155)
T ss_dssp EECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEBC
T ss_pred ECCCCCCCcEEEEEEEEHHHccCCCCccccceEccC
Confidence 999999999999999999997 345678999863
No 14
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.82 E-value=1.8e-19 Score=152.29 Aligned_cols=117 Identities=12% Similarity=0.220 Sum_probs=97.7
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCceEEEEEECCEEEEeecccCCCCCeecceEEEEecCCCcEEEEEEEecCCCCCCc
Q 021238 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWKST 90 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~~~~rT~vi~~tlnP~w~e~f~f~v~~~~~~L~~~V~d~d~~~~dd 90 (315)
...+.|.|+|++|++|+..+..+.+||||+++++....+|+++++++||.|||+|.|.+.+ ...|.|+|||+|.+++|+
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~-~~~L~~~V~D~d~~~~dd 111 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP-VSKLHFRVWSHQTLKSDV 111 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT-TCEEEEEEEECCSSSCCE
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC-CCEEEEEEEECCCCCCCc
Confidence 3578899999999999944445569999999998888899999999999999999999864 788999999999999999
Q ss_pred eeEEEEEEcccCC---C----cccEEEEccCC------CceEEEEEEeecC
Q 021238 91 VLGSVIVTVESEG---Q----TGAVWYTLDSP------SGQVCLHIKTIKL 128 (315)
Q Consensus 91 ~iG~~~i~l~~l~---~----~~~~w~~L~~~------~G~i~~~l~~~~~ 128 (315)
+||++.++|.++. . ....|++|..+ .|+|.+.+.+...
T Consensus 112 ~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 112 LLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp EEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEEC
T ss_pred eEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeec
Confidence 9999999999861 1 12569999753 4777777776655
No 15
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.81 E-value=8e-20 Score=149.19 Aligned_cols=104 Identities=23% Similarity=0.413 Sum_probs=92.8
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCceEEEEEE---CCEEEEeecccCCCCCeecceEEEEecC---CCcEEEEEEEecC
Q 021238 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITC---GSEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYDWD 84 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l---~~~~~rT~vi~~tlnP~w~e~f~f~v~~---~~~~L~~~V~d~d 84 (315)
...+.|.|+|++|++|+..|..+.+||||++++ +....+|+++++++||.|||+|.|.+.. ....|.|+|||+|
T Consensus 31 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 110 (143)
T 3f04_A 31 FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFD 110 (143)
T ss_dssp TTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECC
T ss_pred CCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCC
Confidence 467899999999999999999999999999999 4557899999999999999999999853 2478999999999
Q ss_pred CCCCCceeEEEEEEcccC--CCcccEEEEccC
Q 021238 85 IIWKSTVLGSVIVTVESE--GQTGAVWYTLDS 114 (315)
Q Consensus 85 ~~~~dd~iG~~~i~l~~l--~~~~~~w~~L~~ 114 (315)
..+++++||++.++|.++ +.....|++|.+
T Consensus 111 ~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 111 RFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp SSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 999999999999999997 345678999975
No 16
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.81 E-value=1.5e-19 Score=144.81 Aligned_cols=103 Identities=22% Similarity=0.395 Sum_probs=86.0
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCceEEEEEE-----CCEEEEeecccCCCCCeecceEEEEecC----CCcEEEEEEE
Q 021238 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSVDE----LPVQIIVTIY 81 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l-----~~~~~rT~vi~~tlnP~w~e~f~f~v~~----~~~~L~~~V~ 81 (315)
+..+.|.|+|++|++|+.+|..|.+||||++.+ +....+|+++++++||.|||+|.|.+.. ....|.|+||
T Consensus 15 ~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~ 94 (129)
T 2bwq_A 15 KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLW 94 (129)
T ss_dssp TTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEE
T ss_pred cCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEE
Confidence 456899999999999999999999999999998 3567899999999999999999999532 2568999999
Q ss_pred ecCCCCC--CceeEEEEEEcccC-CCcccEEEEcc
Q 021238 82 DWDIIWK--STVLGSVIVTVESE-GQTGAVWYTLD 113 (315)
Q Consensus 82 d~d~~~~--dd~iG~~~i~l~~l-~~~~~~w~~L~ 113 (315)
|+|..++ +++||++.++|.++ ......|++|+
T Consensus 95 d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~Lq 129 (129)
T 2bwq_A 95 DQARVREEESEFLGEILIELETALLDDEPHWYKLQ 129 (129)
T ss_dssp EC-------CEEEEEEEEEGGGCCCSSCEEEEECC
T ss_pred ECCcCcCcCCceeEEEEEEccccCCCcCCccEECc
Confidence 9999887 99999999999997 33467899984
No 17
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=2e-19 Score=146.57 Aligned_cols=105 Identities=20% Similarity=0.350 Sum_probs=92.3
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCceEEEEEEC---CEEEEeecccCCCCCeecceEEEEecC----CCcEEEEEEEec
Q 021238 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDE----LPVQIIVTIYDW 83 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~---~~~~rT~vi~~tlnP~w~e~f~f~v~~----~~~~L~~~V~d~ 83 (315)
...+.|.|+|++|++|+.+|..|.+||||++++. ....+|+++++++||.|||+|.|.+.. ....|.|+|||+
T Consensus 23 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 102 (141)
T 2d8k_A 23 FQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDY 102 (141)
T ss_dssp SSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEEC
T ss_pred CCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEEC
Confidence 4678899999999999999999999999999993 457799999999999999999998532 357899999999
Q ss_pred CCCCCCceeEEEEEEcccC--CCcccEEEEccCC
Q 021238 84 DIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (315)
Q Consensus 84 d~~~~dd~iG~~~i~l~~l--~~~~~~w~~L~~~ 115 (315)
|..+++++||++.++|.++ +.....|++|.++
T Consensus 103 d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 103 DRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp CSSSSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred CCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 9999999999999999997 3446789999864
No 18
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.81 E-value=6.2e-20 Score=150.89 Aligned_cols=106 Identities=15% Similarity=0.214 Sum_probs=92.4
Q ss_pred CceeEEEEEEEEeecCCCCC-CCCCCceEEEEEEC-----CEEEEeecccCCCCCeecceEEEEecCC---CcEEEEEEE
Q 021238 11 NSAYLIKLELLAAKNLIGAN-LNGTSDPYAIITCG-----SEKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIY 81 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~~d-~~g~sDPyv~v~l~-----~~~~rT~vi~~tlnP~w~e~f~f~v~~~---~~~L~~~V~ 81 (315)
+..+.|.|+|++|++|+.+| ..|.+||||++.+. ....+|+++++++||.|||+|.|.+... ...|.|+||
T Consensus 20 ~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~ 99 (148)
T 3fdw_A 20 QQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVW 99 (148)
T ss_dssp TTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEE
T ss_pred CCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEE
Confidence 45789999999999999988 68999999999984 3477999999999999999999998642 456999999
Q ss_pred ecCCCCCCceeEEEEEEcccC--CCcccEEEEccCCC
Q 021238 82 DWDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSPS 116 (315)
Q Consensus 82 d~d~~~~dd~iG~~~i~l~~l--~~~~~~w~~L~~~~ 116 (315)
|+|..+++++||++.++|.++ ......|++|.++.
T Consensus 100 d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 136 (148)
T 3fdw_A 100 HHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKI 136 (148)
T ss_dssp EECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC-
T ss_pred ECCCCcCCcEEEEEEEEcccccccCCccceEECcCcc
Confidence 999999999999999999987 44567999998754
No 19
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.81 E-value=1.9e-19 Score=148.62 Aligned_cols=104 Identities=23% Similarity=0.413 Sum_probs=92.6
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCceEEEEEE---CCEEEEeecccCCCCCeecceEEEEecC---CCcEEEEEEEecC
Q 021238 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITC---GSEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYDWD 84 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l---~~~~~rT~vi~~tlnP~w~e~f~f~v~~---~~~~L~~~V~d~d 84 (315)
...+.|.|+|++|++|+..|..+.+||||++++ +....+|+++++++||.|||+|.|.+.. ....|.|+|||+|
T Consensus 39 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 118 (152)
T 1rsy_A 39 FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFD 118 (152)
T ss_dssp TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECC
T ss_pred CCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECC
Confidence 356799999999999999999999999999999 3457799999999999999999998853 3578999999999
Q ss_pred CCCCCceeEEEEEEcccC--CCcccEEEEccC
Q 021238 85 IIWKSTVLGSVIVTVESE--GQTGAVWYTLDS 114 (315)
Q Consensus 85 ~~~~dd~iG~~~i~l~~l--~~~~~~w~~L~~ 114 (315)
..+++++||++.++|.++ +.....|++|.+
T Consensus 119 ~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 119 RFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp SSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 999999999999999997 445688999975
No 20
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.80 E-value=2.3e-19 Score=145.14 Aligned_cols=103 Identities=27% Similarity=0.494 Sum_probs=92.0
Q ss_pred ceeEEEEEEEEeecCCCCCCCCCCceEEEEEE-----CCEEEEeecccCCCCCeecceEEEEecC--CCcEEEEEEEecC
Q 021238 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSVDE--LPVQIIVTIYDWD 84 (315)
Q Consensus 12 ~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l-----~~~~~rT~vi~~tlnP~w~e~f~f~v~~--~~~~L~~~V~d~d 84 (315)
..+.|.|+|++|++|+.+|..|.+||||++.+ .....+|+++++++||.|||+|.|.+.. ....|.|+|||+|
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 35899999999999999999999999999999 4567899999999999999999999854 3457999999999
Q ss_pred CCCCCceeEEEEEEcccC-CCcccEEEEccC
Q 021238 85 IIWKSTVLGSVIVTVESE-GQTGAVWYTLDS 114 (315)
Q Consensus 85 ~~~~dd~iG~~~i~l~~l-~~~~~~w~~L~~ 114 (315)
..+++++||++.++|.++ ......|++|.+
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~ 124 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKMPASGWYKLLN 124 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHSCEEEEEECBC
T ss_pred CCCCCceEEEEEEeHHHhccCccCceEECcC
Confidence 999999999999999987 344789999975
No 21
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.80 E-value=3.2e-19 Score=146.74 Aligned_cols=102 Identities=27% Similarity=0.471 Sum_probs=91.1
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCceEEEEEEC-----CEEEEeecccCCCCCeecceEEEEecC--CCcEEEEEEEecCC
Q 021238 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCG-----SEKRFSSMVPGSRYPMWGEEFNFSVDE--LPVQIIVTIYDWDI 85 (315)
Q Consensus 13 ~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~-----~~~~rT~vi~~tlnP~w~e~f~f~v~~--~~~~L~~~V~d~d~ 85 (315)
.+.|.|+|++|++|+.+|..+.+||||++++. ....+|+++++++||.|||+|.|.+.. ....|.|+|||+|.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 46799999999999999999999999999995 457799999999999999999999864 24689999999999
Q ss_pred CCCCceeEEEEEEcccC-CCcccEEEEccC
Q 021238 86 IWKSTVLGSVIVTVESE-GQTGAVWYTLDS 114 (315)
Q Consensus 86 ~~~dd~iG~~~i~l~~l-~~~~~~w~~L~~ 114 (315)
.+++++||++.++|.++ ......|++|.+
T Consensus 110 ~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~ 139 (149)
T 1a25_A 110 TSRNDFMGSLSFGISELQKAGVDGWFKLLS 139 (149)
T ss_dssp SSCCEEEEEEEEEHHHHTTCCEEEEEECBC
T ss_pred CCCCCEEEEEEEEHHHhCcCccCCeEEccC
Confidence 99999999999999987 335678999975
No 22
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.80 E-value=6.6e-20 Score=149.42 Aligned_cols=104 Identities=25% Similarity=0.447 Sum_probs=91.2
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCceEEEEEECCE--------------EEEeecccCCCCCeecceEEEE-ecC---CCc
Q 021238 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGSE--------------KRFSSMVPGSRYPMWGEEFNFS-VDE---LPV 74 (315)
Q Consensus 13 ~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~~--------------~~rT~vi~~tlnP~w~e~f~f~-v~~---~~~ 74 (315)
.+.|.|+|++|++|+++|..|.+||||++++... ..+|+++++++||.|||+|.|. +.. ...
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 5689999999999999999999999999999542 4689999999999999999997 532 367
Q ss_pred EEEEEEEecCCCCCCceeEEEEEEcccC--CCcccEEEEccCCC
Q 021238 75 QIIVTIYDWDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSPS 116 (315)
Q Consensus 75 ~L~~~V~d~d~~~~dd~iG~~~i~l~~l--~~~~~~w~~L~~~~ 116 (315)
.|.|+|||+|..+++++||++.++|.++ ......|++|.++.
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 140 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQT 140 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCC
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccC
Confidence 8999999999999999999999999987 34567999998754
No 23
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.80 E-value=1.8e-18 Score=158.08 Aligned_cols=168 Identities=15% Similarity=0.228 Sum_probs=126.2
Q ss_pred CCceeEEEEEEEEeecCCCCCCCCCCceEEEEEE---CCEEEEeecccCCCCCeecceEEEEecCC---CcEEEEEEEec
Q 021238 10 TNSAYLIKLELLAAKNLIGANLNGTSDPYAIITC---GSEKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (315)
Q Consensus 10 ~~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l---~~~~~rT~vi~~tlnP~w~e~f~f~v~~~---~~~L~~~V~d~ 83 (315)
....+.|.|+|++|++|+.+|.+|.+||||++++ +....+|+++++++||.|||+|.|.+... ...|+|+|||+
T Consensus 16 ~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~ 95 (296)
T 1dqv_A 16 LYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDF 95 (296)
T ss_dssp CSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEEC
T ss_pred eCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEc
Confidence 3467899999999999999999999999999999 45678999999999999999999998532 45799999999
Q ss_pred CCCCCCceeEEEEEE-ccc---CCCcccEEEEccCC------CceEEEEEEeecCccccccccccccccccccccccccC
Q 021238 84 DIIWKSTVLGSVIVT-VES---EGQTGAVWYTLDSP------SGQVCLHIKTIKLPVNASRVMNGYAGANARRRASLDKQ 153 (315)
Q Consensus 84 d~~~~dd~iG~~~i~-l~~---l~~~~~~w~~L~~~------~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~ 153 (315)
|.++++++||++.++ +.+ .......|++|.+. .|++.+.+.+.+.. +......+++..+
T Consensus 96 d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~~~-----------~~l~v~v~~a~~L 164 (296)
T 1dqv_A 96 DRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLPTA-----------GLLTVTIIKASNL 164 (296)
T ss_dssp CSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEETTT-----------TEEEEEEEEEESC
T ss_pred CCCCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEecccc-----------ceeEEEEEEeecC
Confidence 999999999999995 333 34456789999642 37777777765431 1111122344555
Q ss_pred CCcccccCCCCceeeccCCcc--------cceeecceeeeeee
Q 021238 154 GPTVVHQKPGPLQTIFNLLPD--------EFVELSYSCVIERS 188 (315)
Q Consensus 154 ~~~~~~~k~~~f~~~F~lp~~--------E~l~~~~~c~l~~~ 188 (315)
...+..+++++|.++.-.+.+ ....++.++.|...
T Consensus 165 ~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~ 207 (296)
T 1dqv_A 165 KAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEA 207 (296)
T ss_dssp CCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEEC
T ss_pred CccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECce
Confidence 566667778999888754322 34556677877763
No 24
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.79 E-value=2.4e-19 Score=151.15 Aligned_cols=104 Identities=16% Similarity=0.280 Sum_probs=91.3
Q ss_pred ceeEEEEEEEEeecCCCCCC-CCCCceEEEEEEC--C---EEEEeecccCCCCCeecceEEEEecCCCcEEEEEEE-ecC
Q 021238 12 SAYLIKLELLAAKNLIGANL-NGTSDPYAIITCG--S---EKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIY-DWD 84 (315)
Q Consensus 12 ~~g~L~V~Ii~A~~L~~~d~-~g~sDPyv~v~l~--~---~~~rT~vi~~tlnP~w~e~f~f~v~~~~~~L~~~V~-d~d 84 (315)
..+.|.|+|++|++|+.+|. .|.+||||++++. . ..++|+++++++||.|||+|.|.+......|.|+|| |+|
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d 107 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYG 107 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECS
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCC
Confidence 46789999999999999995 7999999999984 2 367999999999999999999998766788999999 999
Q ss_pred CCCCCceeEEEEEEcccC--CCcccEEEEccCC
Q 021238 85 IIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (315)
Q Consensus 85 ~~~~dd~iG~~~i~l~~l--~~~~~~w~~L~~~ 115 (315)
..+++++||++.++|.++ +.....|++|.++
T Consensus 108 ~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 108 RMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp TTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 999999999999999997 4567889999864
No 25
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.79 E-value=7.9e-19 Score=142.72 Aligned_cols=102 Identities=16% Similarity=0.212 Sum_probs=88.4
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCceEEEEEEC---C-EEEEeecccCCCCCeecceEEEEecCC---CcEEEEEEEec
Q 021238 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCG---S-EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~---~-~~~rT~vi~~tlnP~w~e~f~f~v~~~---~~~L~~~V~d~ 83 (315)
...+.|.|+|++|+ ++|.+|.+||||++++. . ...+|+++++++||.|||+|.|.+... ...|.|+|||+
T Consensus 23 ~~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~ 99 (138)
T 1wfm_A 23 CQKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTC 99 (138)
T ss_dssp TTTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEEC
T ss_pred CCCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEEC
Confidence 35678999999999 46789999999999982 2 356999999999999999999998642 46899999999
Q ss_pred CCCCCCceeEEEEEEcccC--CCcccEEEEccCC
Q 021238 84 DIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (315)
Q Consensus 84 d~~~~dd~iG~~~i~l~~l--~~~~~~w~~L~~~ 115 (315)
|.++++++||++.++|.++ ......|++|.+.
T Consensus 100 d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~ 133 (138)
T 1wfm_A 100 DRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTS 133 (138)
T ss_dssp CSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCC
T ss_pred CCCCCCcEEEEEEEEcccccCcccccceeeCcCC
Confidence 9999999999999999997 4567899999863
No 26
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.79 E-value=3.5e-19 Score=147.33 Aligned_cols=105 Identities=26% Similarity=0.423 Sum_probs=91.5
Q ss_pred CCceeEEEEEEEEeecCCCCCCCCCCceEEEEEE-----CCEEEEeecccCCCCCeecceEEEEe--cCCCcEEEEEEEe
Q 021238 10 TNSAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSV--DELPVQIIVTIYD 82 (315)
Q Consensus 10 ~~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l-----~~~~~rT~vi~~tlnP~w~e~f~f~v--~~~~~~L~~~V~d 82 (315)
....+.|.|+|++|++|+++| .|.+||||++.+ .....+|+++++++||.|||+|.|.+ .+....|.|+|||
T Consensus 23 ~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d 101 (153)
T 3fbk_A 23 DAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWN 101 (153)
T ss_dssp EESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEE
T ss_pred ECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEe
Confidence 346789999999999999999 799999999998 23467999999999999999999998 3445679999999
Q ss_pred cCCCCC-CceeEEEEEEcccCC---CcccEEEEccCC
Q 021238 83 WDIIWK-STVLGSVIVTVESEG---QTGAVWYTLDSP 115 (315)
Q Consensus 83 ~d~~~~-dd~iG~~~i~l~~l~---~~~~~w~~L~~~ 115 (315)
+|..++ +++||++.++|.++. .....|++|.++
T Consensus 102 ~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~ 138 (153)
T 3fbk_A 102 RASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGE 138 (153)
T ss_dssp CCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCT
T ss_pred CCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCCh
Confidence 999877 999999999999863 566789999864
No 27
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.79 E-value=6.8e-19 Score=142.84 Aligned_cols=105 Identities=18% Similarity=0.221 Sum_probs=90.0
Q ss_pred CceeEEEEEEEEeecCCCCCCC-CCCceEEEEEEC---CEEEEeecccCCCCCeecceEEEE-ecC---CCcEEEEEEEe
Q 021238 11 NSAYLIKLELLAAKNLIGANLN-GTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFS-VDE---LPVQIIVTIYD 82 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~~d~~-g~sDPyv~v~l~---~~~~rT~vi~~tlnP~w~e~f~f~-v~~---~~~~L~~~V~d 82 (315)
...+.|.|+|++|++|+.+|.. +.+||||++++. ...++|+++++++||.|||+|.|. +.. ....|.|+|||
T Consensus 19 ~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d 98 (138)
T 1ugk_A 19 FERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILS 98 (138)
T ss_dssp GGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEE
T ss_pred CCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEE
Confidence 3567899999999999999985 899999999994 367899999999999999999996 543 24689999999
Q ss_pred cCCCCCCceeEEEEEEcccCCC---cccEEEEccCC
Q 021238 83 WDIIWKSTVLGSVIVTVESEGQ---TGAVWYTLDSP 115 (315)
Q Consensus 83 ~d~~~~dd~iG~~~i~l~~l~~---~~~~w~~L~~~ 115 (315)
+|..+++++||++.++|.++.. ....|++|.++
T Consensus 99 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~ 134 (138)
T 1ugk_A 99 FDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIISG 134 (138)
T ss_dssp ECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBSS
T ss_pred CCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhcC
Confidence 9999999999999999999732 33567999764
No 28
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.79 E-value=2.9e-19 Score=145.22 Aligned_cols=105 Identities=22% Similarity=0.399 Sum_probs=91.2
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCceEEEEEE-----CCEEEEeecccCCCCCeecceEEEEe-cC---CCcEEEEEEE
Q 021238 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSV-DE---LPVQIIVTIY 81 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l-----~~~~~rT~vi~~tlnP~w~e~f~f~v-~~---~~~~L~~~V~ 81 (315)
+..+.|.|+|++|++|+.+|..|.+||||++++ ....++|+++++++||.|||+|.|.+ .. ....|.|+||
T Consensus 18 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 97 (141)
T 1v27_A 18 KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLW 97 (141)
T ss_dssp TTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEE
T ss_pred CCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEE
Confidence 346889999999999999999999999999998 34567999999999999999999994 32 2478999999
Q ss_pred ecCCCCC--CceeEEEEEEcccC-CCcccEEEEccCC
Q 021238 82 DWDIIWK--STVLGSVIVTVESE-GQTGAVWYTLDSP 115 (315)
Q Consensus 82 d~d~~~~--dd~iG~~~i~l~~l-~~~~~~w~~L~~~ 115 (315)
|+|..++ +++||++.++|.++ ......|++|.++
T Consensus 98 d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L~~~ 134 (141)
T 1v27_A 98 DQARVREEESEFLGEILIELETALLDDEPHWYKLQTH 134 (141)
T ss_dssp EBCSSSSCCBCCCEEEEEEGGGCCCSSEEEEEECBCC
T ss_pred ECCCCcCCCCceEEEEEEEccccCCCCCCceEECccc
Confidence 9999887 99999999999997 3446789999863
No 29
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.79 E-value=6.6e-19 Score=143.56 Aligned_cols=104 Identities=18% Similarity=0.311 Sum_probs=90.2
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCceEEEEEECC-----EEEEeecccCCCCCeecceEEEE-ecCC---CcEEEEEEE
Q 021238 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFS-VDEL---PVQIIVTIY 81 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~-----~~~rT~vi~~tlnP~w~e~f~f~-v~~~---~~~L~~~V~ 81 (315)
...+.|.|+|++|++|+.++..|.+||||++++.. ...+|+++++++||.|||+|.|. +... ...|.|+||
T Consensus 26 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 105 (142)
T 2chd_A 26 QDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVC 105 (142)
T ss_dssp GGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEE
T ss_pred CCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEE
Confidence 35778999999999999999999999999999953 67899999999999999999998 5421 368999999
Q ss_pred ecCCCCCCceeEEEEEEcccCC--CcccEEEEccC
Q 021238 82 DWDIIWKSTVLGSVIVTVESEG--QTGAVWYTLDS 114 (315)
Q Consensus 82 d~d~~~~dd~iG~~~i~l~~l~--~~~~~w~~L~~ 114 (315)
|+|..+++++||++.++|.++. .....|++|+.
T Consensus 106 d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 106 DEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred ECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 9999999999999999999984 44566788864
No 30
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.79 E-value=8.8e-19 Score=141.74 Aligned_cols=105 Identities=26% Similarity=0.400 Sum_probs=89.8
Q ss_pred CCceeEEEEEEEEeecCCCCCCCCCCceEEEEEECC-----EEEEeecccCCCCCeecceEEEEecCC---CcEEEEEEE
Q 021238 10 TNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIY 81 (315)
Q Consensus 10 ~~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~-----~~~rT~vi~~tlnP~w~e~f~f~v~~~---~~~L~~~V~ 81 (315)
.+..+.|.|+|++|++|+..|..|.+||||++++.. ...+|+++++++||.|||+|.|.+... ...|.|+||
T Consensus 12 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~ 91 (138)
T 3n5a_A 12 NPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVM 91 (138)
T ss_dssp ETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEE
T ss_pred cCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEE
Confidence 345789999999999999999999999999999842 466999999999999999999998643 367999999
Q ss_pred ecCCCCCCceeEEEEEEcccCCCcccEEEEccC
Q 021238 82 DWDIIWKSTVLGSVIVTVESEGQTGAVWYTLDS 114 (315)
Q Consensus 82 d~d~~~~dd~iG~~~i~l~~l~~~~~~w~~L~~ 114 (315)
|+|..+++++||++.+++.++......|++|..
T Consensus 92 d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~ 124 (138)
T 3n5a_A 92 DKDKLSRNDVIGKIYLSWKSGPGEVKHWKDMIA 124 (138)
T ss_dssp ECCSSSCCEEEEEEEESSSSCHHHHHHHHHHHH
T ss_pred ECCCCCCCcEEEEEEEccccCChHHHHHHHHHh
Confidence 999999999999999999986555555666543
No 31
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.78 E-value=2.4e-19 Score=150.19 Aligned_cols=103 Identities=17% Similarity=0.338 Sum_probs=89.8
Q ss_pred ceeEEEEEEEEeecCCCCCCCCCCceEEEEEECC-----EEEEeecccCCCCCeecceEEEEecC---CCcEEEEEEEec
Q 021238 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYDW 83 (315)
Q Consensus 12 ~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~-----~~~rT~vi~~tlnP~w~e~f~f~v~~---~~~~L~~~V~d~ 83 (315)
..+.|.|+|++|++|+.+|.+|.+||||++++.. ...+|+++++++||.|||+|.|.+.. ....|.|+|||+
T Consensus 35 ~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 114 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDY 114 (166)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEEC
Confidence 5678999999999999999999999999999953 57799999999999999999999854 245899999999
Q ss_pred CCCCCCceeEEEEEEcccCCCcccEEEEccC
Q 021238 84 DIIWKSTVLGSVIVTVESEGQTGAVWYTLDS 114 (315)
Q Consensus 84 d~~~~dd~iG~~~i~l~~l~~~~~~w~~L~~ 114 (315)
|..+++++||++.+++.+++.....|++|..
T Consensus 115 d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~ 145 (166)
T 2cm5_A 115 DIGKSNDYIGGCQLGISAKGERLKHWYECLK 145 (166)
T ss_dssp CSSSCCEEEEEEEEETTCCHHHHHHHHHHHH
T ss_pred CCCCCCcEEEeEEEecccCCchhHHHHHHHh
Confidence 9999999999999999987555556666653
No 32
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.78 E-value=2e-18 Score=143.49 Aligned_cols=104 Identities=33% Similarity=0.472 Sum_probs=89.2
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCceEEEEEEC--C---EEEEeecccCCCCCeecceEEEEecCC---CcEEEEEEEe
Q 021238 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCG--S---EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYD 82 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~--~---~~~rT~vi~~tlnP~w~e~f~f~v~~~---~~~L~~~V~d 82 (315)
+..+.|.|+|++|++|+.+|..|.+||||++++. . ...+|+++++++||.|||+|.|.+... ...|.|+|||
T Consensus 22 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d 101 (159)
T 1tjx_A 22 PTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLD 101 (159)
T ss_dssp TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEE
T ss_pred CCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEE
Confidence 4578999999999999999999999999999984 2 466999999999999999999998542 4579999999
Q ss_pred cCCCCCCceeEEEEEEcccC--------------CCcccEEEEccC
Q 021238 83 WDIIWKSTVLGSVIVTVESE--------------GQTGAVWYTLDS 114 (315)
Q Consensus 83 ~d~~~~dd~iG~~~i~l~~l--------------~~~~~~w~~L~~ 114 (315)
+|..+++++||++.+++..+ ......|++|.+
T Consensus 102 ~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 102 YDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 147 (159)
T ss_dssp CCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred CCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcC
Confidence 99999999999999999854 234567777764
No 33
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=5.7e-19 Score=143.93 Aligned_cols=106 Identities=26% Similarity=0.399 Sum_probs=90.1
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCceEEEEEEC-----CEEEEeecccCCCCCeecceEEEEecC---CCcEEEEEEEe
Q 021238 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCG-----SEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYD 82 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~-----~~~~rT~vi~~tlnP~w~e~f~f~v~~---~~~~L~~~V~d 82 (315)
...+.|.|+|++|++|+++|..| +||||++++. ...++|+++++++||.|||+|.|.+.. ....|.|+|||
T Consensus 21 ~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 99 (142)
T 2dmg_A 21 SQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKN 99 (142)
T ss_dssp TTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEE
T ss_pred CCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEE
Confidence 34678999999999999999999 9999999983 256799999999999999999999853 24589999999
Q ss_pred cCCCCC--CceeEEEEEEcccC--CCcccEEEEccCCCc
Q 021238 83 WDIIWK--STVLGSVIVTVESE--GQTGAVWYTLDSPSG 117 (315)
Q Consensus 83 ~d~~~~--dd~iG~~~i~l~~l--~~~~~~w~~L~~~~G 117 (315)
+|.++. +++||++.++|.++ ......|++|.++.+
T Consensus 100 ~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~~ 138 (142)
T 2dmg_A 100 SGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDSG 138 (142)
T ss_dssp CCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSCS
T ss_pred CCCccccCCcEEEEEEEecccccccccccceeeccCCCC
Confidence 998764 57999999999987 346778999987543
No 34
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.77 E-value=6.4e-19 Score=145.52 Aligned_cols=104 Identities=18% Similarity=0.369 Sum_probs=83.5
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCceEEEEEE--CCE---EEEeecccCCCCCeecceEEEEecCC---CcEEEEEEEe
Q 021238 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITC--GSE---KRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYD 82 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l--~~~---~~rT~vi~~tlnP~w~e~f~f~v~~~---~~~L~~~V~d 82 (315)
+..+.|.|+|++|++|+.+|..|.+||||++++ +.. .++|+++++++||.|||+|.|.+... ...|.|+|||
T Consensus 27 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d 106 (153)
T 1w15_A 27 STTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLD 106 (153)
T ss_dssp TTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEE
T ss_pred CCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEe
Confidence 356789999999999999999999999999998 433 56999999999999999999998653 3679999999
Q ss_pred cCCCCCCceeEEEEEEcccCCCcccEEEEccC
Q 021238 83 WDIIWKSTVLGSVIVTVESEGQTGAVWYTLDS 114 (315)
Q Consensus 83 ~d~~~~dd~iG~~~i~l~~l~~~~~~w~~L~~ 114 (315)
+|..+++++||++.+++.+.......|++|..
T Consensus 107 ~d~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~ 138 (153)
T 1w15_A 107 SERGSRNEVIGRLVLGATAEGSGGGHWKEICD 138 (153)
T ss_dssp CCTTSCCEEEEEEEESTTCCSHHHHHHHHHHH
T ss_pred CCCCCCCcEEEEEEECCCCCchHHHHHHHHHh
Confidence 99999999999999999886555556666643
No 35
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=8.3e-19 Score=143.86 Aligned_cols=105 Identities=18% Similarity=0.308 Sum_probs=89.0
Q ss_pred CceeEEEEEEEEeecCCCC-CC------CCCCceEEEEEEC---CEEEEeecccCCCCCeecceEEEEecC---CCcEEE
Q 021238 11 NSAYLIKLELLAAKNLIGA-NL------NGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQII 77 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~~-d~------~g~sDPyv~v~l~---~~~~rT~vi~~tlnP~w~e~f~f~v~~---~~~~L~ 77 (315)
+..+.|.|+|++|++|+.. |. .+.+||||++++. ....+|+++++++||.|||+|.|.+.. ....|.
T Consensus 23 ~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 102 (147)
T 2enp_A 23 LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLL 102 (147)
T ss_dssp TTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEE
T ss_pred CCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEE
Confidence 3567899999999999984 43 4589999999984 356799999999999999999999853 245899
Q ss_pred EEEEecCCCCCCceeEEEEEEcccC--CCcccEEEEccCC
Q 021238 78 VTIYDWDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (315)
Q Consensus 78 ~~V~d~d~~~~dd~iG~~~i~l~~l--~~~~~~w~~L~~~ 115 (315)
|+|||+|.++++++||++.++|.++ ......|++|.++
T Consensus 103 ~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 142 (147)
T 2enp_A 103 LTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPS 142 (147)
T ss_dssp EEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBCC
T ss_pred EEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeecC
Confidence 9999999999999999999999997 3445689999864
No 36
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.73 E-value=2.5e-17 Score=161.52 Aligned_cols=110 Identities=20% Similarity=0.302 Sum_probs=97.5
Q ss_pred ceeEEEEEEEEeecCCCCCCCCCCceEEEEEECCEEEEeecccCCCCCeecceEEEEec--CCCcEEEEEEEecCCCCCC
Q 021238 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVD--ELPVQIIVTIYDWDIIWKS 89 (315)
Q Consensus 12 ~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~~~~rT~vi~~tlnP~w~e~f~f~v~--~~~~~L~~~V~d~d~~~~d 89 (315)
..+.|.|+|++|++|+. |.+|++||||+|+++....+|+++++++||.|||+|.|.+. +....|+|+|||+|..++|
T Consensus 392 ~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~d 470 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDD 470 (540)
T ss_dssp TEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCC
T ss_pred cccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCC
Confidence 48899999999999998 99999999999999988899999999999999999999864 3577899999999999999
Q ss_pred ceeEEEEEEcccCCCcccEEEEccCCCceEEEEEEee
Q 021238 90 TVLGSVIVTVESEGQTGAVWYTLDSPSGQVCLHIKTI 126 (315)
Q Consensus 90 d~iG~~~i~l~~l~~~~~~w~~L~~~~G~i~~~l~~~ 126 (315)
|+||++.++|.. +....|++|+ .|.+++++++.
T Consensus 471 D~LG~~~~~L~~--g~~~~~~~l~--~G~l~~~~~~~ 503 (540)
T 3nsj_A 471 DLLGSCDRSPHS--GFHEVTCELN--HGRVKFSYHAK 503 (540)
T ss_dssp EEEEEEEECCCS--EEEEEEEECS--SSEEEEEEEEE
T ss_pred CEEEEEEEEeeC--CcEEEEEEcC--CeEEEEEEEEE
Confidence 999999999973 3346788875 58888887754
No 37
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.72 E-value=7.6e-17 Score=157.66 Aligned_cols=116 Identities=21% Similarity=0.347 Sum_probs=101.8
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCceEEEEEECCEEEEeecccCCCCCeecceEEEEecCC-CcEEEEEEEecCCCCCC
Q 021238 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDEL-PVQIIVTIYDWDIIWKS 89 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~~~~rT~vi~~tlnP~w~e~f~f~v~~~-~~~L~~~V~d~d~~~~d 89 (315)
...+.|.|+|++|++|+++|.+|.+||||++.++....+|+++++|+||.|||+|.|.+... ...|+|+|||+|..++|
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~ 463 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPD 463 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSC
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCC
Confidence 35789999999999999999999999999999999999999999999999999999999654 46799999999999999
Q ss_pred ceeEEEEEEcccCC------CcccEEEEccC-CCceEEEEEEee
Q 021238 90 TVLGSVIVTVESEG------QTGAVWYTLDS-PSGQVCLHIKTI 126 (315)
Q Consensus 90 d~iG~~~i~l~~l~------~~~~~w~~L~~-~~G~i~~~l~~~ 126 (315)
++||++.+++.++. .....|++|.+ ..|++.+.+.+.
T Consensus 464 d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 464 DFLGRTEIPVAKIRTEQESKGPMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp CEEEEEEEEHHHHHHHHHHHCSCCEEEECBSSSSCEEEEEEEEE
T ss_pred CceEEEEEEHHHhccccCCCCceeeeecCCCCCCceEEEEEEEE
Confidence 99999999999862 22578999975 468888877653
No 38
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.69 E-value=1.9e-16 Score=127.58 Aligned_cols=85 Identities=16% Similarity=0.320 Sum_probs=73.2
Q ss_pred ceeEEEEEEEEeecCCCCCCCCCCceEEEEEECCEEEEeeccc-CCCCCeecceEEEEecCCCcEEEEEEEecCCCCCCc
Q 021238 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVP-GSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWKST 90 (315)
Q Consensus 12 ~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~~~~rT~vi~-~tlnP~w~e~f~f~v~~~~~~L~~~V~d~d~~~~dd 90 (315)
..+.|.|+|++|++|.. .|.+||||++.. ...+|.++. +++||.|||+|.|.+.+....|.|+|||+| .++|+
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~~--~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd 76 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLKV--QNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDT 76 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEEE--TTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSCEE
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEEe--cCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCCCC
Confidence 45899999999998852 688999999993 234555555 799999999999999877778999999999 88999
Q ss_pred eeEEEEEEcccC
Q 021238 91 VLGSVIVTVESE 102 (315)
Q Consensus 91 ~iG~~~i~l~~l 102 (315)
+||++.++|.++
T Consensus 77 ~iG~~~i~l~~l 88 (131)
T 2cjt_A 77 MVGTVWIPLRTI 88 (131)
T ss_dssp EEEEEEEEGGGS
T ss_pred eEEEEEEEHHHh
Confidence 999999999997
No 39
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.69 E-value=2e-16 Score=132.79 Aligned_cols=88 Identities=16% Similarity=0.289 Sum_probs=75.6
Q ss_pred CCCceeEEEEEEEEeecCCCCCCCCCCceEEEEEECCEEEEeeccc-CCCCCeecceEEEEecCCCcEEEEEEEecCCCC
Q 021238 9 QTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVP-GSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIW 87 (315)
Q Consensus 9 ~~~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~~~~rT~vi~-~tlnP~w~e~f~f~v~~~~~~L~~~V~d~d~~~ 87 (315)
.....+.|.|+|++|++|. ..|.+||||++.. ...+|++++ +++||.|||+|.|.+.+....|.|+|||+| .+
T Consensus 9 ~~g~~~~L~V~V~~A~~l~---~~g~~DPYV~v~~--~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~ 82 (167)
T 2cjs_A 9 GGGILSLLCVGVKKAKFDG---AQEKFNTYVTLKV--QNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LI 82 (167)
T ss_dssp CCSCCCEEEEEEEEEECSS---CGGGCEEEEEEEE--TTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SS
T ss_pred CCCceEEEEEEEEEEECCC---CCCCCCeEEEEEe--cceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CC
Confidence 3445789999999999884 3788999999993 234666665 699999999999999877778999999999 88
Q ss_pred CCceeEEEEEEcccC
Q 021238 88 KSTVLGSVIVTVESE 102 (315)
Q Consensus 88 ~dd~iG~~~i~l~~l 102 (315)
+|++||++.++|.++
T Consensus 83 ~dd~iG~~~i~L~~l 97 (167)
T 2cjs_A 83 WDTMVGTVWIPLRTI 97 (167)
T ss_dssp CCEEEEEEEEEGGGS
T ss_pred CCceEEEEEEEHHHh
Confidence 999999999999997
No 40
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.66 E-value=8.6e-16 Score=139.08 Aligned_cols=103 Identities=33% Similarity=0.480 Sum_probs=88.0
Q ss_pred ceeEEEEEEEEeecCCCCCCCCCCceEEEEEEC--C---EEEEeecccCCCCCeecceEEEEecCC---CcEEEEEEEec
Q 021238 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCG--S---EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (315)
Q Consensus 12 ~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~--~---~~~rT~vi~~tlnP~w~e~f~f~v~~~---~~~L~~~V~d~ 83 (315)
..+.|.|+|++|++|+.+|.+|.+||||++++. . ...+|+++++++||.|||+|.|.+... ...|.|+|||+
T Consensus 148 ~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 227 (284)
T 2r83_A 148 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 227 (284)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEEC
T ss_pred cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeC
Confidence 467899999999999999999999999999983 2 356999999999999999999998643 34799999999
Q ss_pred CCCCCCceeEEEEEEcccC--------------CCcccEEEEccC
Q 021238 84 DIIWKSTVLGSVIVTVESE--------------GQTGAVWYTLDS 114 (315)
Q Consensus 84 d~~~~dd~iG~~~i~l~~l--------------~~~~~~w~~L~~ 114 (315)
|..+++++||++.+++..+ .....+|++|.+
T Consensus 228 d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~ 272 (284)
T 2r83_A 228 DKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 272 (284)
T ss_dssp CSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBC
T ss_pred CCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCC
Confidence 9999999999999999763 234457888765
No 41
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.61 E-value=1.5e-15 Score=153.43 Aligned_cols=104 Identities=20% Similarity=0.361 Sum_probs=93.3
Q ss_pred CceeEEEEEEEEeecCCC---CCCCCCCceEEEEEEC---CEEEEeecccCCCCCeecceEEEEecC-CCcEEEEEEEec
Q 021238 11 NSAYLIKLELLAAKNLIG---ANLNGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDE-LPVQIIVTIYDW 83 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~---~d~~g~sDPyv~v~l~---~~~~rT~vi~~tlnP~w~e~f~f~v~~-~~~~L~~~V~d~ 83 (315)
.+.+.|.|+|++|++|++ +|..|++||||++++. ..+++|+++++++||.|||+|.|.+.. ....|+|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 468999999999999999 8889999999999996 467899999999999999999999975 467899999999
Q ss_pred CCCCCCceeEEEEEEcccC--CCcccEEEEccCC
Q 021238 84 DIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (315)
Q Consensus 84 d~~~~dd~iG~~~i~l~~l--~~~~~~w~~L~~~ 115 (315)
|..+ |++||++.++|.++ +.....|++|.+.
T Consensus 95 D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~~ 127 (749)
T 1cjy_A 95 NYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQV 127 (749)
T ss_dssp CSSS-CEEEEEECCBSTTSCTTCCCCEEEEETTT
T ss_pred CCCC-CceeEEEEEEHHHcCCCCceEEEEecCCC
Confidence 9998 99999999999997 3446789999863
No 42
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.60 E-value=1.3e-14 Score=144.99 Aligned_cols=106 Identities=21% Similarity=0.302 Sum_probs=92.5
Q ss_pred ceeEEEEEEEEeecCCCCCC--CCCCceEEEEEEC-----CEEEEeecccCC-CCCeecceEEEEecCC-CcEEEEEEEe
Q 021238 12 SAYLIKLELLAAKNLIGANL--NGTSDPYAIITCG-----SEKRFSSMVPGS-RYPMWGEEFNFSVDEL-PVQIIVTIYD 82 (315)
Q Consensus 12 ~~g~L~V~Ii~A~~L~~~d~--~g~sDPyv~v~l~-----~~~~rT~vi~~t-lnP~w~e~f~f~v~~~-~~~L~~~V~d 82 (315)
..+.|+|+|++|++|+..+. .|.+||||+|.+. ..+.+|++++++ +||.|||+|.|.+..+ ...|+|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 57899999999999999884 7899999999993 367899999987 9999999999999754 4689999999
Q ss_pred cCCCCCCceeEEEEEEcccCCCcccEEEEccCCCce
Q 021238 83 WDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSGQ 118 (315)
Q Consensus 83 ~d~~~~dd~iG~~~i~l~~l~~~~~~w~~L~~~~G~ 118 (315)
+|..+++++||++.++|..+..+ ..|++|....|+
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G-~r~v~L~d~~g~ 609 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQG-YRHVHLLSKNGD 609 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCE-EEEEEEECTTSC
T ss_pred cCCCCCCceeEEEEEEHHHcCCC-cEEEeCCCCCcC
Confidence 99999999999999999998664 469999765554
No 43
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.59 E-value=3.3e-16 Score=143.08 Aligned_cols=101 Identities=27% Similarity=0.407 Sum_probs=86.3
Q ss_pred ceeEEEEEEEEeecCCCCCCCCCCceEEEEEEC-----CEEEEeecccCCCCCeecceEEEEecCC---CcEEEEEEEec
Q 021238 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCG-----SEKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (315)
Q Consensus 12 ~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~-----~~~~rT~vi~~tlnP~w~e~f~f~v~~~---~~~L~~~V~d~ 83 (315)
..+.|.|+|++|++|+.+|..|.+||||++++. ..+++|+++++++||.|||+|.|.+... ...|.|+|||+
T Consensus 150 ~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 229 (296)
T 1dqv_A 150 TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDY 229 (296)
T ss_dssp TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEEC
T ss_pred ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeC
Confidence 468899999999999999999999999999984 2467999999999999999999998643 35799999999
Q ss_pred CCCCCCceeEEEEEEcccCCC-cccEEEEc
Q 021238 84 DIIWKSTVLGSVIVTVESEGQ-TGAVWYTL 112 (315)
Q Consensus 84 d~~~~dd~iG~~~i~l~~l~~-~~~~w~~L 112 (315)
|..+++++||++.+++..++. ...+|+.+
T Consensus 230 d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~ 259 (296)
T 1dqv_A 230 DCIGHNEVIGVCRVGPEAADPHGREHWAEM 259 (296)
T ss_dssp CSSSCCEEEEECCCSSCTTCHHHHHHHHTS
T ss_pred CCCCCCceEEEEEECCccCCchhHHHHHHH
Confidence 999999999999999987654 33445444
No 44
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.58 E-value=3.5e-14 Score=114.32 Aligned_cols=113 Identities=14% Similarity=0.236 Sum_probs=91.9
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCceEEEEEECCEEEEeeccc-CCCCCeecceEEEEecC---CCcEEEEEEEecCCC
Q 021238 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVP-GSRYPMWGEEFNFSVDE---LPVQIIVTIYDWDII 86 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~~~~rT~vi~-~tlnP~w~e~f~f~v~~---~~~~L~~~V~d~d~~ 86 (315)
+...-|+|.|.+|.+|+ |++|||+++.+...+++|+++. ++.||.|||.|++++.. .+..|.+.|+|++++
T Consensus 18 ~~~msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v 92 (144)
T 3l9b_A 18 GSHMALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKV 92 (144)
T ss_dssp -CCEEEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTT
T ss_pred CCcEEEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccc
Confidence 45677999999999998 5899999999999999999998 69999999999999853 467899999999999
Q ss_pred CCCceeEEEEEEcccCC--CcccEEEEccCCC-----ceEEEEEEeecC
Q 021238 87 WKSTVLGSVIVTVESEG--QTGAVWYTLDSPS-----GQVCLHIKTIKL 128 (315)
Q Consensus 87 ~~dd~iG~~~i~l~~l~--~~~~~w~~L~~~~-----G~i~~~l~~~~~ 128 (315)
+++++||++.++|.++. +....+.+|...+ +.+.+.+.|.+.
T Consensus 93 ~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 93 FSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp SCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEET
T ss_pred cCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecCC
Confidence 99999999999999973 2233455564332 455666666553
No 45
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.47 E-value=2.9e-15 Score=145.81 Aligned_cols=98 Identities=21% Similarity=0.294 Sum_probs=15.0
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCceEEEEEECCE-EEEeecccCC---CCCeecceEEEEecCCCcEEEEEEEec-C-
Q 021238 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSE-KRFSSMVPGS---RYPMWGEEFNFSVDELPVQIIVTIYDW-D- 84 (315)
Q Consensus 11 ~~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~~-~~rT~vi~~t---lnP~w~e~f~f~v~~~~~~L~~~V~d~-d- 84 (315)
...+.|.|+|++|++|+++| ||||+++++.. ..||+++++| +||.|||+|.|.+.+....|.|+|||. |
T Consensus 8 r~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~ 82 (483)
T 3bxj_A 8 RVDNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDK 82 (483)
T ss_dssp EEEECC--------------------------------------------------CCEECC------------------
T ss_pred eeccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCc
Confidence 45788999999999999887 99999999765 5699999999 999999999998755467899999994 5
Q ss_pred --CCCCCceeEEEEEEcccC--CCcccEEEEcc
Q 021238 85 --IIWKSTVLGSVIVTVESE--GQTGAVWYTLD 113 (315)
Q Consensus 85 --~~~~dd~iG~~~i~l~~l--~~~~~~w~~L~ 113 (315)
..++|++||.+.+++.++ +...+.|++|.
T Consensus 83 ~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~ 115 (483)
T 3bxj_A 83 KRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVT 115 (483)
T ss_dssp ------------------------CCEECC---
T ss_pred cccCCCCceEEEEEEEHHHhcCCCCCCeEEECC
Confidence 367899999999999997 34567899994
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.45 E-value=1.3e-13 Score=139.39 Aligned_cols=102 Identities=27% Similarity=0.494 Sum_probs=90.5
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCceEEEEEE-----CCEEEEeecccCCCCCeecceEEEEecC--CCcEEEEEEEecCC
Q 021238 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSVDE--LPVQIIVTIYDWDI 85 (315)
Q Consensus 13 ~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l-----~~~~~rT~vi~~tlnP~w~e~f~f~v~~--~~~~L~~~V~d~d~ 85 (315)
.+.|.|+|++|++|.++|.+|.+||||++.+ ...+.+|+++++++||.|||+|.|.+.. ....|.|+|||+|.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 4678999999999999999999999999998 3456799999999999999999999863 45679999999999
Q ss_pred CCCCceeEEEEEEcccC-CCcccEEEEccC
Q 021238 86 IWKSTVLGSVIVTVESE-GQTGAVWYTLDS 114 (315)
Q Consensus 86 ~~~dd~iG~~~i~l~~l-~~~~~~w~~L~~ 114 (315)
.++|++||++.+++.++ ....+.|+.|..
T Consensus 251 ~~~dd~iG~~~i~l~~l~~~~~~~w~~Lls 280 (674)
T 3pfq_A 251 TSRNDFMGSLSFGISELQKAGVDGWFKLLS 280 (674)
T ss_dssp SSCCEECCBCCCBTTHHHHCCEEEEEECBC
T ss_pred ccccccccccccchhhhccCCcccceeecc
Confidence 99999999999999986 344688999975
No 47
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.25 E-value=7.4e-11 Score=120.47 Aligned_cols=97 Identities=14% Similarity=0.205 Sum_probs=80.0
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCceEEEEEECC-------EEEEeecccC-CCCCeecce-EEEE-ecCC-CcEEEEEEE
Q 021238 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-------EKRFSSMVPG-SRYPMWGEE-FNFS-VDEL-PVQIIVTIY 81 (315)
Q Consensus 13 ~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~-------~~~rT~vi~~-tlnP~w~e~-f~f~-v~~~-~~~L~~~V~ 81 (315)
.+.|+|+|++|++|+.. .+||||+|.+.. .+++|+++++ ++||.|||+ |.|. +..+ -..|+|+||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 47899999999999853 689999999832 5679999986 599999998 9998 7533 457999999
Q ss_pred ecCCCCCCceeEEEEEEcccCCCcccEEEEccCCCce
Q 021238 82 DWDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSGQ 118 (315)
Q Consensus 82 d~d~~~~dd~iG~~~i~l~~l~~~~~~w~~L~~~~G~ 118 (315)
|++ ++|||++.+||..+..+ -++++|..+.|+
T Consensus 725 D~d----ddfiG~~~ipL~~L~~G-yR~vpL~~~~g~ 756 (816)
T 3qr0_A 725 EEN----GKFIGHRVMPLDGIKPG-YRHVPLRNESNR 756 (816)
T ss_dssp ETT----SCEEEEEEEESTTCCCE-EEEEEEECTTSC
T ss_pred ecC----CCeeeEEEEEHHHcCCc-ceEEEEeCCCCC
Confidence 985 78999999999999765 467888765544
No 48
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.20 E-value=9.4e-11 Score=120.39 Aligned_cols=105 Identities=15% Similarity=0.247 Sum_probs=83.1
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCceEEEEEECC------EEEEeecccC-CCCCeecc-eEEEE-ecC-CCcEEEEEEEe
Q 021238 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSSMVPG-SRYPMWGE-EFNFS-VDE-LPVQIIVTIYD 82 (315)
Q Consensus 13 ~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~------~~~rT~vi~~-tlnP~w~e-~f~f~-v~~-~~~~L~~~V~d 82 (315)
...|+|+|++|++|+.. .+||||+|.+.. .+++|+++.+ ++||.||| +|.|. +.. .-..|+|+|||
T Consensus 724 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 45899999999999853 689999999832 2469999986 59999999 69998 643 34579999999
Q ss_pred cCCCCCCceeEEEEEEcccCCCcccEEEEccCCCc------eEEEEEEee
Q 021238 83 WDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSG------QVCLHIKTI 126 (315)
Q Consensus 83 ~d~~~~dd~iG~~~i~l~~l~~~~~~w~~L~~~~G------~i~~~l~~~ 126 (315)
+| ++|||++.+||..+..+ -++++|....| .+.+.+.+.
T Consensus 800 ~d----ddfiG~~~lpL~~L~~G-yR~vpL~~~~g~~l~~atLfv~i~~~ 844 (885)
T 3ohm_B 800 EG----GKFVGHRILPVSAIRSG-YHYVCLRNEANQPLCLPALLIYTEAS 844 (885)
T ss_dssp TT----TEEEEEEEEETTTCCCE-EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred CC----ccEEeeEEEEHHHcCCC-ceEEEecCCCCCccCceEEEEEEEEE
Confidence 87 78999999999999764 45788876544 455555544
No 49
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.20 E-value=1.3e-10 Score=119.05 Aligned_cols=98 Identities=17% Similarity=0.256 Sum_probs=80.1
Q ss_pred ceeEEEEEEEEeecCCCCCCCCCCceEEEEEE-C---C--EEEEee-ccc-CCCCCeecc-eEEE-EecC-CCcEEEEEE
Q 021238 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC-G---S--EKRFSS-MVP-GSRYPMWGE-EFNF-SVDE-LPVQIIVTI 80 (315)
Q Consensus 12 ~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l-~---~--~~~rT~-vi~-~tlnP~w~e-~f~f-~v~~-~~~~L~~~V 80 (315)
..+.|.|+|++|++|+. +.+||||+|.+ + . .+++|+ +++ +++||.||| +|.| .+.. .-..|+|.|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 46799999999999985 47999999998 3 1 357999 887 469999999 6999 7753 345799999
Q ss_pred EecCCCCCCceeEEEEEEcccCCCcccEEEEccCCCce
Q 021238 81 YDWDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSGQ 118 (315)
Q Consensus 81 ~d~d~~~~dd~iG~~~i~l~~l~~~~~~w~~L~~~~G~ 118 (315)
||+| +++||++.+||..+..+ ..|++|....|+
T Consensus 752 ~D~d----~d~iG~~~ipl~~L~~G-~r~v~L~~~~g~ 784 (799)
T 2zkm_X 752 MEEG----NKFLGHRIIPINALNSG-YHHLCLHSESNM 784 (799)
T ss_dssp EETT----TEEEEEEEEEGGGBCCE-EEEEEEECTTCC
T ss_pred EEeC----CCccceEeeehhhcCCC-cEEEeccCCCCC
Confidence 9987 78999999999999654 578999765554
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.12 E-value=2e-09 Score=84.20 Aligned_cols=109 Identities=13% Similarity=0.202 Sum_probs=83.0
Q ss_pred ceeEEEEEEEEeecCCCCCCCCCCceEEEEEECCEE----EEe-ecccCCCCCeecceEEEEecCCCcEEEEEEEecCCC
Q 021238 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEK----RFS-SMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDII 86 (315)
Q Consensus 12 ~~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l~~~~----~rT-~vi~~tlnP~w~e~f~f~v~~~~~~L~~~V~d~d~~ 86 (315)
-...|+|.+.++.--.-+......||||.|.++... .+| ...++|..|.||++|...+.+ ++.|.+.|++...
T Consensus 4 m~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~a~- 81 (126)
T 1yrk_A 4 MAPFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE-GRVIQIVLMRAAE- 81 (126)
T ss_dssp CCCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT-TCEEEEEEEEETT-
T ss_pred cCccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC-CEEEEEEEEcCCC-
Confidence 345678887665432212223468999999996443 154 777789999999999999877 8899999996443
Q ss_pred CCCceeEEEEEEcccC-------CCcccEEEEccCCCceEEEEEEee
Q 021238 87 WKSTVLGSVIVTVESE-------GQTGAVWYTLDSPSGQVCLHIKTI 126 (315)
Q Consensus 87 ~~dd~iG~~~i~l~~l-------~~~~~~w~~L~~~~G~i~~~l~~~ 126 (315)
+|++.+.+++.++ +...+.|+.|+| .|++++.+.+.
T Consensus 82 ---~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP-~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 ---EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP-QAKVLMSVQYF 124 (126)
T ss_dssp ---EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS-SCEEEEEEEEE
T ss_pred ---CeeeEEEEEHHHHHhhhccCCCceEEEEeccc-CcEEEEEEEEe
Confidence 8999999999986 234578999998 89999998875
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.08 E-value=1.7e-09 Score=85.76 Aligned_cols=114 Identities=11% Similarity=0.225 Sum_probs=87.8
Q ss_pred CCCCceeEEEEEEEEeecCCCCC-CCCCCceEEEEEECCEE----EEe-ecccCCCCCeecceEEEEecCCCcEEEEEEE
Q 021238 8 PQTNSAYLIKLELLAAKNLIGAN-LNGTSDPYAIITCGSEK----RFS-SMVPGSRYPMWGEEFNFSVDELPVQIIVTIY 81 (315)
Q Consensus 8 ~~~~~~g~L~V~Ii~A~~L~~~d-~~g~sDPyv~v~l~~~~----~rT-~vi~~tlnP~w~e~f~f~v~~~~~~L~~~V~ 81 (315)
.+++-...|+|.+.++.-.+-+. .....||||.|.++... .+| ...++|..|.||++|...+.+ .+.|.|.|+
T Consensus 4 ~~~~m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-Gr~l~i~Vf 82 (138)
T 2enj_A 4 GSSGMSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-GRVMQIIVK 82 (138)
T ss_dssp CCSSCCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-SCEEEEEEE
T ss_pred cccccCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC-CeEEEEEEE
Confidence 45566778899987765433222 13368999999996442 466 667789999999999998877 889999999
Q ss_pred ecCCCCCCceeEEEEEEcccC-------CCcccEEEEccCCCceEEEEEEeec
Q 021238 82 DWDIIWKSTVLGSVIVTVESE-------GQTGAVWYTLDSPSGQVCLHIKTIK 127 (315)
Q Consensus 82 d~d~~~~dd~iG~~~i~l~~l-------~~~~~~w~~L~~~~G~i~~~l~~~~ 127 (315)
+... +|++.+.+++.++ +...+.|+.|+| .|++++.+.+..
T Consensus 83 h~a~----~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP-~Gkl~v~i~~~~ 130 (138)
T 2enj_A 83 GKNV----DLISETTVELYSLAERCRKNNGKTEIWLELKP-QGRMLMNARYFL 130 (138)
T ss_dssp CSSC----SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS-SCEEEEEEEECC
T ss_pred cCCC----CeeeEEEEEHHHHHhhhccCCCceEEEEeccc-CcEEEEEEEEEE
Confidence 5432 8999999999986 234578999998 899999999853
No 52
>2hth_B Vacuolar protein sorting protein 36; GLUE domain, PH domain, viral budding, ubiquitin complex, protein transport; 2.70A {Homo sapiens} SCOP: b.55.1.12 PDB: 2dx5_A
Probab=96.56 E-value=0.052 Score=43.32 Aligned_cols=93 Identities=13% Similarity=0.212 Sum_probs=60.9
Q ss_pred ceeEEeecceeeeeecCCCceeEEEEecCceeEEEeeccccccCcEEEEEecCCCCCCCCC---CCCCCCceEEEEeeec
Q 021238 192 HGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIILRMGAGGHGVPP---LGSPDGRVRYKFASFW 268 (315)
Q Consensus 192 ~G~lyis~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~~~~~~i~i~~~~g~~~~~~~~---~~~~~~~~~~~F~sf~ 268 (315)
.|++|+|.+.+||-.... ....+.||+.+|..++.+... +..++.|+++-.....+.++ --++....++.|.+=
T Consensus 39 ~G~l~LTshRli~~d~~~-~~~s~~lpl~~v~~~e~~~~~-f~~s~Ki~l~l~~~~~~~~~gp~~~s~~~~~kLsFr~G- 115 (140)
T 2hth_B 39 AGTLLLSTHRLIWRDQKN-HECCMAILLSQIVFIEEQAAG-IGKSAKIVVHLHPAPPNKEPGPFQSSKNSYIKLSFKEH- 115 (140)
T ss_dssp CEEEEEESSEEEEEETTC-CSCCEEEEGGGEEEEEEECCT-TSSCCEEEEEECCCCCCSSSCCCSTTSCCEEEEEETTS-
T ss_pred CCEEEEecCEEEEecCCC-CceEEEEEhHHeeeeeeeccc-cccCceEEEEecCCCccCCCCCcccccCcEEEEEEcCC-
Confidence 399999999999976544 468899999999999999875 34444444433222222111 112334455556553
Q ss_pred chHHHHHHHHHHHHhhhhh
Q 021238 269 NRNHALRQLQRTAKNYHTM 287 (315)
Q Consensus 269 ~rd~~~~~l~~~~~~~~~~ 287 (315)
..++.++.|.+.+++....
T Consensus 116 g~~eF~~~L~~al~~k~W~ 134 (140)
T 2hth_B 116 GQIEFYRRLSEEMTQRRWE 134 (140)
T ss_dssp CHHHHHHHHHHHHHHCCC-
T ss_pred CChHHHHHHHHHHHHhhhc
Confidence 3488899998888876554
No 53
>2cay_A VPS36 PH domain, vacuolar protein sorting protein 36; transport, ESCRT-II, lipid-binding, multivesicular bodies, membrane; 1.9A {Saccharomyces cerevisiae} SCOP: b.55.1.12
Probab=95.94 E-value=0.036 Score=44.53 Aligned_cols=85 Identities=16% Similarity=0.188 Sum_probs=62.1
Q ss_pred ceeEEeecceeeeeecCCCceeEEEEecCceeEEEeeccccccCcEEEEEecCCCCCCCCCCCCCCCceEEEEeeecchH
Q 021238 192 HGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYKFASFWNRN 271 (315)
Q Consensus 192 ~G~lyis~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~~~~~~i~i~~~~g~~~~~~~~~~~~~~~~~~~F~sf~~rd 271 (315)
.|++|+|...++|-.........+.+|+.+|.+++.+... +..++.|+++-..+ -++....++.|.+=.. +
T Consensus 52 ~G~lyLTshRIIyv~~~~~~~~SfslPL~~v~~~e~~~~~-fg~s~Ki~l~~~p~-------~~~~~~~KLsFk~GGa-~ 122 (145)
T 2cay_A 52 RGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSGF-LTRSPRLILFFKDP-------SSSTEFVQLSFRKSDG-V 122 (145)
T ss_dssp SEEEEEESSEEEEEESSCHHHHCEEEEGGGEEEEEEECSS-SSSSCEEEEEESSC-------SSTTCCEEEEESSSCC-H
T ss_pred ccEEEEEcCeEEEecCCCCcceEEEeEhHheeeeeEEcCc-cccCceEEEEecCC-------CCCceEEEEEEcCCCc-h
Confidence 3999999999999765543337899999999999998875 45566666543211 2334567888887666 8
Q ss_pred HHHHHHHHHHHhhh
Q 021238 272 HALRQLQRTAKNYH 285 (315)
Q Consensus 272 ~~~~~l~~~~~~~~ 285 (315)
+.++.|.+.+++..
T Consensus 123 eF~~~l~~al~~~~ 136 (145)
T 2cay_A 123 LFSQATERALENIL 136 (145)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888887654
No 54
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=93.87 E-value=0.31 Score=36.83 Aligned_cols=94 Identities=17% Similarity=0.258 Sum_probs=65.3
Q ss_pred cccceeecceeeeeeecccceeEEeecceeeeeecCCCceeEEEEecCceeEEEeecc--ccccCcEEEEEecCCCCCCC
Q 021238 173 PDEFVELSYSCVIERSFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQH--AFINPAITIILRMGAGGHGV 250 (315)
Q Consensus 173 ~~E~l~~~~~c~l~~~~~~~G~lyis~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~--~~~~~~i~i~~~~g~~~~~~ 250 (315)
++|.|.....-.|++.- |.+|++..++-|-..-- .+-.+.+++.||...+-+.. +.+ -+.|+.+.|
T Consensus 5 ~~~~ll~v~~v~yKK~d---GtL~l~~d~i~W~p~~~-~~~~vs~~~~~I~~qq~SP~~k~KV--qLqi~l~~~------ 72 (108)
T 1pfj_A 5 SEEVLLIVKKVRQKKQD---GALYLMAERIAWAPEGK-DRFTISHMYADIKCQKISPEGKAKI--QLQLVLHAG------ 72 (108)
T ss_dssp SCCEEEEESCCBCSSCB---CEEEEETTEEEEECSSS-SSCSEEEETTTCCCEEECCSSSSSC--EEEEECSSS------
T ss_pred chheeEEehhheeecCC---ceEEEEcceEEEccCCC-CCceEEEehhhhhcceeCCCCCccE--EEEEEEeCC------
Confidence 45677776666666543 99999999999887543 36668889999998654432 221 578888654
Q ss_pred CCCCCCCCceEEEEeee----cchHHHHHHHHHHHHhhh
Q 021238 251 PPLGSPDGRVRYKFASF----WNRNHALRQLQRTAKNYH 285 (315)
Q Consensus 251 ~~~~~~~~~~~~~F~sf----~~rd~~~~~l~~~~~~~~ 285 (315)
+...|.|++= -.||..=++|.+++.+.+
T Consensus 73 -------~~~~F~Ftn~~~a~~erd~VKd~L~~~l~~~k 104 (108)
T 1pfj_A 73 -------DTTNFHFSNESTAVKERDAVKDLLQQLLPKFK 104 (108)
T ss_dssp -------CEEEEECCCSSCTTHHHHHHHHHHHHHHHHHS
T ss_pred -------CceEEEEcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678888884 346666777777776654
No 55
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=92.31 E-value=2.3 Score=36.25 Aligned_cols=56 Identities=11% Similarity=0.067 Sum_probs=41.2
Q ss_pred EEEeecccCCCCCeecceEEEEecC---CCcEEEEEEEecCCC----CCCceeEEEEEEcccC
Q 021238 47 KRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYDWDII----WKSTVLGSVIVTVESE 102 (315)
Q Consensus 47 ~~rT~vi~~tlnP~w~e~f~f~v~~---~~~~L~~~V~d~d~~----~~dd~iG~~~i~l~~l 102 (315)
..+|.|...+.+|.|+|++.+.+.. ...-|.|++++...- ..+..+|-+++||-+-
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~~ 140 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMRY 140 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBCT
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcccC
Confidence 3478888889999999999999864 355699999875421 1235788888887654
No 56
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=91.78 E-value=1 Score=46.69 Aligned_cols=87 Identities=13% Similarity=0.132 Sum_probs=60.5
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCceEEEEEE--CCE----EEEeecccCCCCCeecceEEEEec----CCCcEEEEEEEe
Q 021238 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITC--GSE----KRFSSMVPGSRYPMWGEEFNFSVD----ELPVQIIVTIYD 82 (315)
Q Consensus 13 ~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l--~~~----~~rT~vi~~tlnP~w~e~f~f~v~----~~~~~L~~~V~d 82 (315)
...+.|+|.++.++... ..++-||.+.+ +.. ...|..+.-..+|.|||.+.|++. +....|.|.||+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 45788999999998653 35677888766 433 234555544678999999999874 357789999999
Q ss_pred cCCC--C----------CCceeEEEEEEcccC
Q 021238 83 WDII--W----------KSTVLGSVIVTVESE 102 (315)
Q Consensus 83 ~d~~--~----------~dd~iG~~~i~l~~l 102 (315)
.... + .+..+|.+.++|-+-
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EC----------------CEEEEEEEEESBCT
T ss_pred ecCCccCccccccccccccceEEEEeeeEECC
Confidence 7432 1 245899999999763
No 57
>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*
Probab=88.27 E-value=4.3 Score=39.27 Aligned_cols=73 Identities=16% Similarity=0.186 Sum_probs=48.8
Q ss_pred CCcccceeecceeeee-e--ecccceeEEeecceeeeeecCCCceeEEEEecCceeEEEeecc--ccc-cC-cEEEEEec
Q 021238 171 LLPDEFVELSYSCVIE-R--SFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQH--AFI-NP-AITIILRM 243 (315)
Q Consensus 171 lp~~E~l~~~~~c~l~-~--~~~~~G~lyis~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~--~~~-~~-~i~i~~~~ 243 (315)
+-++|.++..-..+.. . .-.+.|.+|+|..++.|.+.....+..+-||+.-|..|+|... ... .+ .|.|..++
T Consensus 9 lLpGE~i~~~~~~V~~~~~~~~~~~GtL~lTn~rLiF~~~~~~~~~~~~iPL~~I~~vek~~~~s~~~~~~~~l~I~CKD 88 (528)
T 1zsq_A 9 LLPGENIKDMAKDVTYICPFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETVCKD 88 (528)
T ss_dssp CCTTCCEEEEEEEEEEEETTTEEEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEEEEETT
T ss_pred cCCCCeEEEecCCEEEeCCCCCceeEEEEEECCEEEEEccCCCccEEEEeeccceEEEEEcCCCCcCCCCCceEEEEccC
Confidence 4456666544222221 1 1256799999999999999754445678999999999999652 111 22 58888864
No 58
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=87.92 E-value=2.6 Score=44.31 Aligned_cols=88 Identities=15% Similarity=0.199 Sum_probs=59.7
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCceEEEEEE--CC----EEEEeecccCCCCCeecceEEEEec----CCCcEEEEEEEe
Q 021238 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITC--GS----EKRFSSMVPGSRYPMWGEEFNFSVD----ELPVQIIVTIYD 82 (315)
Q Consensus 13 ~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l--~~----~~~rT~vi~~tlnP~w~e~f~f~v~----~~~~~L~~~V~d 82 (315)
...+.|+|+++.++.. +.....+-||.+.+ +. ...+|..+. ..+|.|||...|++. +....|.|.||+
T Consensus 354 ~~~f~v~i~~~~~~n~-~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNV-NIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCC-CCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCC-CccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 3467899999988753 33344677888877 32 223444333 457889999999874 357789999998
Q ss_pred cCCC----CCCceeEEEEEEcccC
Q 021238 83 WDII----WKSTVLGSVIVTVESE 102 (315)
Q Consensus 83 ~d~~----~~dd~iG~~~i~l~~l 102 (315)
.... ..+..||.+.++|-+-
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCT
T ss_pred ecCccCcccccceeEEeeeeeEcc
Confidence 7642 1245899999999774
No 59
>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}
Probab=87.04 E-value=2.2 Score=41.11 Aligned_cols=76 Identities=14% Similarity=0.133 Sum_probs=50.1
Q ss_pred cccceeEEeecceeeeeecCCCceeEEEEecCceeEEEeeccccccCcEEEEEecCCCCCCCCCCCCCCCceEEEEeeec
Q 021238 189 FLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYKFASFW 268 (315)
Q Consensus 189 ~~~~G~lyis~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~~~~~~i~i~~~~g~~~~~~~~~~~~~~~~~~~F~sf~ 268 (315)
-++.|.+|+|..++.|.+.. ...+-||+.-|..|+|.....-...|.|..++- ...+|.|..-.
T Consensus 23 ~~~~GtL~lTn~~LiF~~~~---~~e~wi~~~~I~~VeK~~~~~~~~~l~I~CKDf-------------r~~~f~f~~~~ 86 (512)
T 2yf0_A 23 KSLTGTLYLTATHLLFIDSH---QKETWILHHHIASVEKLALTTSGCPLVIQCKNF-------------RTVHFIVPRER 86 (512)
T ss_dssp -CCEEEEEECSSEEEEEESS---SCEEEEEGGGEEEEEECCCBTTBEEEEEEETTS-------------CEEEEEESCHH
T ss_pred CceeEEEEEECCEEEEeCCC---CCceEecccceeEEEEecCCCCCceEEEEecCC-------------cEEEEEeCChH
Confidence 35679999999999999943 334689999999999976432223588888653 33455565544
Q ss_pred chHHHHHHHHHH
Q 021238 269 NRNHALRQLQRT 280 (315)
Q Consensus 269 ~rd~~~~~l~~~ 280 (315)
.+.+.|..|.++
T Consensus 87 ~~~~v~~sL~~~ 98 (512)
T 2yf0_A 87 DCHDIYNSLLQL 98 (512)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 444445555443
No 60
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=86.77 E-value=4.2 Score=42.30 Aligned_cols=88 Identities=14% Similarity=0.099 Sum_probs=56.6
Q ss_pred eEEEEEEEEeecCCCCCCCCCCceEEEEEE--CCEE---EEeecccCCCCCeecceEEEEec----CCCcEEEEEEEecC
Q 021238 14 YLIKLELLAAKNLIGANLNGTSDPYAIITC--GSEK---RFSSMVPGSRYPMWGEEFNFSVD----ELPVQIIVTIYDWD 84 (315)
Q Consensus 14 g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l--~~~~---~rT~vi~~tlnP~w~e~f~f~v~----~~~~~L~~~V~d~d 84 (315)
..+.|.|+.+...... .+..++-||.+.+ +... .+|..+.-+.+|.|||.+.|++. +....|.|+||+..
T Consensus 218 ~~f~i~i~~~~~~~~~-~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLP-RTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCC-TTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeeccccccc-CCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 4578888887652211 1235677877665 4332 24444444567999999988874 35778999999854
Q ss_pred CCC----------------CCceeEEEEEEcccC
Q 021238 85 IIW----------------KSTVLGSVIVTVESE 102 (315)
Q Consensus 85 ~~~----------------~dd~iG~~~i~l~~l 102 (315)
..+ +...+|.+.++|-+-
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp C--------------------CEEEEEEEESBCT
T ss_pred cCccccccccccccccccccceeEEEEeeeeecC
Confidence 221 345899999999773
No 61
>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A
Probab=86.34 E-value=6.1 Score=39.13 Aligned_cols=98 Identities=15% Similarity=0.176 Sum_probs=59.9
Q ss_pred cCCcccceeecceee-eee--ecccceeEEeecceeeeeecCCCceeEEEEecCceeEEEeecc--ccc-cC-cEEEEEe
Q 021238 170 NLLPDEFVELSYSCV-IER--SFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQH--AFI-NP-AITIILR 242 (315)
Q Consensus 170 ~lp~~E~l~~~~~c~-l~~--~~~~~G~lyis~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~--~~~-~~-~i~i~~~ 242 (315)
.+-++|.++..-..+ +.. .-.+.|.+|+|..++.|.+........+-||+.-|..|+|... ... .+ .|.|..+
T Consensus 80 ~LLPGE~v~~~~~~V~~~~p~~~~~~GtL~lTnyrLiF~~~~~~~~~~~~IPL~~I~~Iekv~g~s~~g~~~~~l~I~CK 159 (657)
T 1lw3_A 80 PLLPGENIKDMAKDVTYICPFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETVCK 159 (657)
T ss_dssp CCCTTCCEEEEEEEEEEEETTTEEEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEEEEET
T ss_pred ccCCCeeEEEEeCCEEEecCCCCceeEEEEEECCEEEEEecCCCcceEEEecccceEEEEecCCCcccCCCCceEEEEec
Confidence 344566666433222 211 1246799999999999998754445678999999999999642 111 22 5888886
Q ss_pred cCCCCCCCCCCCCCCCceEEEEeee-cchHHHHHHHHHH
Q 021238 243 MGAGGHGVPPLGSPDGRVRYKFASF-WNRNHALRQLQRT 280 (315)
Q Consensus 243 ~g~~~~~~~~~~~~~~~~~~~F~sf-~~rd~~~~~l~~~ 280 (315)
+. .-.+|.|..- .++.+.|..|.++
T Consensus 160 Df-------------R~~~f~f~~~~~~~~~v~~~L~~~ 185 (657)
T 1lw3_A 160 DI-------------RNLRFAHKPEGRTRRSIFENLMKY 185 (657)
T ss_dssp TT-------------EEEEEECCGGGCCHHHHHHHHHHH
T ss_pred CC-------------cEEEEEeCCccchHHHHHHHHHHH
Confidence 43 2344555433 2244555555554
No 62
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=80.39 E-value=1.5 Score=46.25 Aligned_cols=69 Identities=17% Similarity=0.282 Sum_probs=48.2
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCceEEEEEE--CCEE----EEeecccCCCCCeecceEEEEec----CCCcEEEEEEEe
Q 021238 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITC--GSEK----RFSSMVPGSRYPMWGEEFNFSVD----ELPVQIIVTIYD 82 (315)
Q Consensus 13 ~g~L~V~Ii~A~~L~~~d~~g~sDPyv~v~l--~~~~----~rT~vi~~tlnP~w~e~f~f~v~----~~~~~L~~~V~d 82 (315)
...+.|+|..+.++... ..++-||.+.+ +... ..|..+.-..+|.|||.+.|++. +....|.|.||+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 45788999999888643 34667776554 4333 24544444678999999998874 347789999999
Q ss_pred cC
Q 021238 83 WD 84 (315)
Q Consensus 83 ~d 84 (315)
..
T Consensus 429 ~~ 430 (1092)
T 2y3a_A 429 VL 430 (1092)
T ss_dssp C-
T ss_pred ec
Confidence 63
No 63
>1t77_A Lipopolysaccharide-responsive and beige-like anchor protein, CDC4-like protein; PH-beach domains, vesicle trafficking, signal transduction; 2.40A {Homo sapiens} SCOP: a.169.1.1 b.55.1.6 PDB: 1mi1_A
Probab=70.92 E-value=5.2 Score=37.34 Aligned_cols=65 Identities=15% Similarity=0.177 Sum_probs=45.5
Q ss_pred cceeeeee-ecccceeEEeecceeeeeecCCCc-----e---------eEEEEecCceeEEEeeccccccCcEEEEEecC
Q 021238 180 SYSCVIER-SFLYHGRMYVSAWHICFHSNAFSR-----Q---------MKVIIPIGDIDEIQRSQHAFINPAITIILRMG 244 (315)
Q Consensus 180 ~~~c~l~~-~~~~~G~lyis~~~~cF~s~~~g~-----~---------~~~~i~~~~i~~i~k~~~~~~~~~i~i~~~~g 244 (315)
...|.+.. .....|++.|+...+.|....... . ....+++.||..|-+..-..-..||+|.+.+|
T Consensus 6 ~~~~~~i~p~~~~~G~l~it~~~iyF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~~Rryll~~~alEif~~~g 85 (414)
T 1t77_A 6 STPAQLVAPSVVVKGTLSVTSSELYFEVDEEDPNFKKIDPKILAYTEGLHGKWLFTEIRSIFSRRYLLQNTALEIFMANR 85 (414)
T ss_dssp EEEEEEECSSCEEEEEEEECSSEEEEEECTTCHHHHHSCHHHHHHCCCTTCEEEGGGEEEEEEEEETTEEEEEEEEETTS
T ss_pred EEEEEEEeeecceeeEEEEeCCEEEEEeCCCcccccccccchhccccCcceEecchheeeeeeeeccCcceeEEEEEcCC
Confidence 45677766 455569999999999998632110 0 01368999999998876543334999999754
No 64
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=66.63 E-value=14 Score=29.55 Aligned_cols=90 Identities=10% Similarity=0.075 Sum_probs=59.5
Q ss_pred CCceeEEEEEEEEeecCCCCC--CCCCCceEEEEEE---CCEEEEeecccCCCCCeecceEEEEecCC--------CcEE
Q 021238 10 TNSAYLIKLELLAAKNLIGAN--LNGTSDPYAIITC---GSEKRFSSMVPGSRYPMWGEEFNFSVDEL--------PVQI 76 (315)
Q Consensus 10 ~~~~g~L~V~Ii~A~~L~~~d--~~g~sDPyv~v~l---~~~~~rT~vi~~tlnP~w~e~f~f~v~~~--------~~~L 76 (315)
.+.++.+.|.|.++.- .+.. ..+..+|..-+.+ +-+.+.|.++. ..+|.+|.+-.+.+... ...+
T Consensus 14 ~~gEnlfEihi~~~~~-~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l 91 (156)
T 2yrb_A 14 ERGENLFEIHINKVTF-SSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTI 91 (156)
T ss_dssp CSSCEEEEEEEEEECC-CHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCE
T ss_pred cCCCcEEEEEEeEEEE-cHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCE
Confidence 3568889999988762 2210 1223456444444 34445555555 88999999888877421 2358
Q ss_pred EEEEEecCCCCCCceeEEEEEEcccC
Q 021238 77 IVTIYDWDIIWKSTVLGSVIVTVESE 102 (315)
Q Consensus 77 ~~~V~d~d~~~~dd~iG~~~i~l~~l 102 (315)
.++++.... +..+.||.++|+|.++
T Consensus 92 ~lELhqa~g-~~~~tla~~~I~l~~l 116 (156)
T 2yrb_A 92 TLEVHQAYS-TEYETIAACQLKFHEI 116 (156)
T ss_dssp EEEEEEECS-SCEEEEEEEEECCSHH
T ss_pred EEEEEEeeC-CCceEEEEEEEEhHHh
Confidence 999998753 3567999999999986
No 65
>1zyi_A Methylosome subunit picln; PH domain, cell volume regulation, RNA splicing, translation; NMR {Canis lupus familiaris}
Probab=65.36 E-value=15 Score=29.88 Aligned_cols=51 Identities=10% Similarity=0.256 Sum_probs=39.6
Q ss_pred cceeEEeecceeeeeecCCCceeEEEEecCceeE--EEeeccccccCcEEEEEecC
Q 021238 191 YHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDE--IQRSQHAFINPAITIILRMG 244 (315)
Q Consensus 191 ~~G~lyis~~~~cF~s~~~g~~~~~~i~~~~i~~--i~k~~~~~~~~~i~i~~~~g 244 (315)
=.|.|||+...+.|.+. ....+.|||..|.- |.+...+.-.|.|.+.+...
T Consensus 42 g~GtLyVt~~~l~W~~~---~~~G~sI~YpsIsLHAIsrd~~~~p~~clY~Qld~~ 94 (171)
T 1zyi_A 42 GTGTLYIAESRLSWLDG---SGLGFSLEYPTISLHAVSRDLNAYPREHLYVMVNAK 94 (171)
T ss_dssp CEEEEEEETTEEEEEET---TTEEEEESSCCCSEEECCSSCSSCCSCCEEEEEECC
T ss_pred CceEEEEEcCEEEEEcC---CCcEEEeecCeEEEEEEecCCCCCCCceEEEEEecc
Confidence 45999999999999887 36789999999875 77766554446888887643
No 66
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=55.04 E-value=33 Score=26.01 Aligned_cols=73 Identities=12% Similarity=0.205 Sum_probs=39.6
Q ss_pred ccCCCcccccCCCCceeeccCCc------ccceeecceeeeeeeccc--ce-eE-EeecceeeeeecCCCcee---EEEE
Q 021238 151 DKQGPTVVHQKPGPLQTIFNLLP------DEFVELSYSCVIERSFLY--HG-RM-YVSAWHICFHSNAFSRQM---KVII 217 (315)
Q Consensus 151 ~k~~~~~~~~k~~~f~~~F~lp~------~E~l~~~~~c~l~~~~~~--~G-~l-yis~~~~cF~s~~~g~~~---~~~i 217 (315)
..+...+...++++|.++.-++. ...+.++.++.|...+.+ .- .+ -....+.+|+.+.++... ...|
T Consensus 44 ~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i 123 (143)
T 3f04_A 44 AELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKV 123 (143)
T ss_dssp ECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEE
T ss_pred cCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCCCCCCceEEEEEE
Confidence 34444555567778877764433 245566778888763322 10 00 012334567777665432 4667
Q ss_pred ecCcee
Q 021238 218 PIGDID 223 (315)
Q Consensus 218 ~~~~i~ 223 (315)
|+.++.
T Consensus 124 ~l~~l~ 129 (143)
T 3f04_A 124 PMNTVD 129 (143)
T ss_dssp EGGGCC
T ss_pred EHHHcc
Confidence 777763
No 67
>3fss_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; 1.43A {Saccharomyces cerevisiae} PDB: 3tw1_A* 3tvv_A* 3gyp_A 3gyo_A 3to1_A
Probab=54.68 E-value=39 Score=28.84 Aligned_cols=68 Identities=18% Similarity=0.318 Sum_probs=48.4
Q ss_pred ceeEEeecceeeeeecCCCceeEEEEecCceeEEEeeccccccCcEEEEEecCCCCCCCCCCCCCCCceEEEEeeecchH
Q 021238 192 HGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYKFASFWNRN 271 (315)
Q Consensus 192 ~G~lyis~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~~~~~~i~i~~~~g~~~~~~~~~~~~~~~~~~~F~sf~~rd 271 (315)
.|-||.-++++-|--. +--+.|+++||.+|.=++...-.=++.|+++.| ..|.|++.-..+
T Consensus 166 eG~LyfL~~~ilFgf~----KP~l~i~~~dI~svs~Srv~~RTFdl~v~~k~g---------------~e~eFsmIDq~E 226 (237)
T 3fss_A 166 EGTLYFLPDHIIFGFK----KPILLLDASDIESITYSSITRLTFNASLVTKDG---------------EKYEFSMIDQTE 226 (237)
T ss_dssp EEEEEECSSEEEEESS----SSCEEEEGGGEEEEEEESCCSSEEEEEEEETTS---------------CEEEEEEEEGGG
T ss_pred CeEEEEecCceEEecC----CCeEEEEehhEEEEEEEeccCcEEEEEEEECCC---------------CeEEEeecCHHH
Confidence 4999999988888522 335899999999998887554444888887632 589999876444
Q ss_pred HHHHHHHHH
Q 021238 272 HALRQLQRT 280 (315)
Q Consensus 272 ~~~~~l~~~ 280 (315)
|..|.+.
T Consensus 227 --~~~Id~f 233 (237)
T 3fss_A 227 --YAKIDDY 233 (237)
T ss_dssp --HHHHHHH
T ss_pred --HHHHHHH
Confidence 3444443
No 68
>1ou8_A Stringent starvation protein B homolog; peptide-binding pocket, protein-peptide complex, homodimer, transport protein; 1.60A {Haemophilus influenzae} SCOP: b.136.1.1 PDB: 1zsz_A 1twb_A 1zsz_B
Probab=54.43 E-value=18 Score=27.22 Aligned_cols=38 Identities=18% Similarity=0.256 Sum_probs=34.1
Q ss_pred ceeEEeecceeeeeecCCCceeEEEEecCceeEEEeec
Q 021238 192 HGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQ 229 (315)
Q Consensus 192 ~G~lyis~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~ 229 (315)
.+.+.+...++.|....-|....+.||+..|..|--..
T Consensus 59 v~~L~i~nd~isF~ARFgGv~~~i~VP~~AV~aIyArE 96 (111)
T 1ou8_A 59 TGNLQLTNDFIQFNARFKGVSRELYIPMGAALAIYARE 96 (111)
T ss_dssp CEEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEETT
T ss_pred hcCeEEeccEEEEEEEECCEeEEEEEehHhheEeeeec
Confidence 38899999999999999999999999999999986543
No 69
>1yfn_A Stringent starvation protein B; protein-peptide complex, SSPB, RSEA, protein binding; 1.80A {Escherichia coli} SCOP: b.136.1.1 PDB: 1ox9_A 1ox8_A
Probab=52.56 E-value=19 Score=27.31 Aligned_cols=38 Identities=13% Similarity=0.186 Sum_probs=33.9
Q ss_pred ceeEEeecceeeeeecCCCceeEEEEecCceeEEEeec
Q 021238 192 HGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQ 229 (315)
Q Consensus 192 ~G~lyis~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~ 229 (315)
.+.+.+...++.|....-|....+.||+..|..|--..
T Consensus 60 v~~L~i~nd~IsF~ARFgGv~~~i~VP~~AV~aIyArE 97 (118)
T 1yfn_A 60 VGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARE 97 (118)
T ss_dssp CEEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEETT
T ss_pred hcCeEEeccEEEEEEEECCEeEEEEEehHhheEeeeee
Confidence 37899999999999999999999999999999986543
No 70
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=51.72 E-value=68 Score=23.46 Aligned_cols=45 Identities=7% Similarity=0.101 Sum_probs=30.1
Q ss_pred eecceeeeeecCCCceeEEEEecCceeEEEeeccccccCcEEEEE
Q 021238 197 VSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIIL 241 (315)
Q Consensus 197 is~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~~~~~~i~i~~ 241 (315)
+..+.++||.+......+-+|++.++..+.......-...+.|.+
T Consensus 41 L~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~F~i~~ 85 (126)
T 1fao_A 41 LHRNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLVF 85 (126)
T ss_dssp EETTEEEEESSTTCSSCSEEEEGGGCCEEEEECSSSSSSEEEEEE
T ss_pred EECCEEEEeCCCCCCCceeEEEccceEEEEecccCCCCCEEEEEe
Confidence 345567777665555667889999998887654333233678876
No 71
>1ou9_A Stringent starvation protein B homolog; SSRA peptide-binding protein, homodimer, transport protein; 1.80A {Haemophilus influenzae} SCOP: b.136.1.1 PDB: 1oul_A 1zsz_C
Probab=50.71 E-value=21 Score=27.48 Aligned_cols=38 Identities=18% Similarity=0.256 Sum_probs=34.0
Q ss_pred ceeEEeecceeeeeecCCCceeEEEEecCceeEEEeec
Q 021238 192 HGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQ 229 (315)
Q Consensus 192 ~G~lyis~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~ 229 (315)
.+.+.+...++.|....-|....+.||+.-|..|--..
T Consensus 59 v~~L~i~nd~IsF~ARFgGv~~~I~VP~~AV~aIyArE 96 (129)
T 1ou9_A 59 TGNLQLTNDFIQFNARFKGVSRELYIPMGAALAIYARE 96 (129)
T ss_dssp CEEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEETT
T ss_pred hcCeEEeccEEEEEEEECCEeEEEEEehHheeEeeecc
Confidence 38899999999999999999999999999999986543
No 72
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=48.87 E-value=29 Score=27.20 Aligned_cols=71 Identities=8% Similarity=-0.037 Sum_probs=42.4
Q ss_pred CCCcccccCCCCceeeccCCc---------ccceeecceeeeeeec--ccce-eE-EeecceeeeeecCCCcee---EEE
Q 021238 153 QGPTVVHQKPGPLQTIFNLLP---------DEFVELSYSCVIERSF--LYHG-RM-YVSAWHICFHSNAFSRQM---KVI 216 (315)
Q Consensus 153 ~~~~~~~~k~~~f~~~F~lp~---------~E~l~~~~~c~l~~~~--~~~G-~l-yis~~~~cF~s~~~g~~~---~~~ 216 (315)
+.+.+..+++++|.++.-+|. .....++.++.|...+ .+.. .+ ..+..+.+|+.+.++... .+.
T Consensus 55 L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d~~~~~d~iG~~~ 134 (155)
T 2z0u_A 55 LSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDRSHLEECLGGAQ 134 (155)
T ss_dssp GGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEECTTSCEEEEEEEE
T ss_pred cCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECCCCCCCcEEEEEE
Confidence 334445567788888775551 2466778889988732 2221 11 123445678887776543 467
Q ss_pred EecCcee
Q 021238 217 IPIGDID 223 (315)
Q Consensus 217 i~~~~i~ 223 (315)
|++.++.
T Consensus 135 i~l~~l~ 141 (155)
T 2z0u_A 135 ISLAEVC 141 (155)
T ss_dssp EECTTSC
T ss_pred EEHHHcc
Confidence 8888874
No 73
>1y5o_A TFB1, RNA polymerase II transcription factor B 73 kDa subunit; TFIIH, PH domain, phosphoinositides, VP16; NMR {Saccharomyces cerevisiae} SCOP: b.55.1.9 PDB: 2gs0_A 2k2u_A 2l2i_A 2lox_A*
Probab=48.74 E-value=84 Score=23.65 Aligned_cols=53 Identities=13% Similarity=0.266 Sum_probs=37.5
Q ss_pred eeeeeecccceeEEeecc----eeeeeecCCCceeEEEEecCceeEEEeeccccccC--cEEEEEe
Q 021238 183 CVIERSFLYHGRMYVSAW----HICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINP--AITIILR 242 (315)
Q Consensus 183 c~l~~~~~~~G~lyis~~----~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~~~~~--~i~i~~~ 242 (315)
|.+++. .|-|.+++. .+-|.+ ..| ...+.||+..|..++-+... .| -+.|+.+
T Consensus 7 a~yKKk---~G~lti~eD~~p~~l~W~p-~~g-~~~isI~l~~It~LQqTp~t--s~KvmLKI~~k 65 (115)
T 1y5o_A 7 AIFEKV---SGIIAINEDVSPAELTWRS-TDG-DKVHTVVLSTIDKLQATPAS--SEKMMLRLIGK 65 (115)
T ss_dssp EESSSC---EEEEEEECSSSSCEEEEEE-SSS-SCEEEEESTTCSEEEECCTT--CSSEEEEEEEC
T ss_pred eEEEec---ccEEEEccCCCcceEEEEE-CCC-CccEEEEhhhhhhhhcCCCC--CCceEEEEEEe
Confidence 444443 499999988 778887 445 55699999999999887643 13 4566654
No 74
>3f5r_A FACT complex subunit POB3; APC7736, FACT complex (SPT16P-POB3P), saccharomyces cerevisi structural genomics, PSI-2; 1.70A {Saccharomyces cerevisiae}
Probab=41.24 E-value=1.5e+02 Score=24.39 Aligned_cols=77 Identities=9% Similarity=0.165 Sum_probs=57.8
Q ss_pred ccceeEEeecceeeeeec-CCC-----ceeEEEEecCceeEEEeeccccccCcEEEEEecCCCCCCCCCCCCCCCceEEE
Q 021238 190 LYHGRMYVSAWHICFHSN-AFS-----RQMKVIIPIGDIDEIQRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYK 263 (315)
Q Consensus 190 ~~~G~lyis~~~~cF~s~-~~g-----~~~~~~i~~~~i~~i~k~~~~~~~~~i~i~~~~g~~~~~~~~~~~~~~~~~~~ 263 (315)
...|++-++..-+.|.+. .-| ....+.||-.||..++=.+.+ -.+.+.|.++.| ..|.
T Consensus 35 ~~~G~lkla~~glgWK~~~~tG~~~~~~~k~~~i~~sdI~~a~W~r~~-rg~~LrI~~K~g---------------~~~~ 98 (191)
T 3f5r_A 35 KFSGRFRIADSGLGWKISTSGGSAANQARKPFLLPATELSTVQWSRGC-RGYDLKINTKNQ---------------GVIQ 98 (191)
T ss_dssp SSCEEEEEETTEEEEEECCSSTTTHHHHCCCEEEEGGGEEEEEEEECS-SSEEEEEEESSS---------------CEEE
T ss_pred CcccEEEEcCCceEEeecCCCCccccccCceEEEcHHHcCeEEEEEcc-CCcEEEEEECCC---------------ceEE
Confidence 346999999999999987 444 114589999999999888865 345788988643 5899
Q ss_pred EeeecchHHHHHHHHHHHHhh
Q 021238 264 FASFWNRNHALRQLQRTAKNY 284 (315)
Q Consensus 264 F~sf~~rd~~~~~l~~~~~~~ 284 (315)
|..|...| |..|.+..++.
T Consensus 99 fdGF~~~D--~~~L~~~fk~~ 117 (191)
T 3f5r_A 99 LDGFSQDD--YNLIKNDFHRR 117 (191)
T ss_dssp EEEECGGG--HHHHHHHHHHH
T ss_pred ecCCCHHH--HHHHHHHHHHH
Confidence 99998655 55666666543
No 75
>2gcl_A Hypothetical 63.0 kDa protein in DAK1-ORC1 intergenic region; chromaint, double PH domain, yfact, DNA replication, RPA; 2.21A {Saccharomyces cerevisiae} SCOP: b.55.1.10 PDB: 2gcj_A
Probab=39.56 E-value=91 Score=27.01 Aligned_cols=82 Identities=20% Similarity=0.338 Sum_probs=54.3
Q ss_pred cceeeeeeecccceeEEeecceeeeeecCCCceeEEEEecCceeEEEeecc-----ccccCcEEEEEecCCCCCCCCCCC
Q 021238 180 SYSCVIERSFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQH-----AFINPAITIILRMGAGGHGVPPLG 254 (315)
Q Consensus 180 ~~~c~l~~~~~~~G~lyis~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~-----~~~~~~i~i~~~~g~~~~~~~~~~ 254 (315)
...|++..+ .|-||.=++.+-|-. +--+.||++||.+|+=++. ..-.=.+.|.++.|
T Consensus 166 ~Vkcs~ka~---eG~LypL~~gflF~~-----KP~~~i~~~~I~sV~fsrvg~~~~~~rTFdl~v~~k~g---------- 227 (261)
T 2gcl_A 166 AVSCSFKAN---EGYLYPLDNAFFFLT-----KPTLYIPFSDVSMVNISRAGQTSTSSRTFDLEVVLRSN---------- 227 (261)
T ss_dssp CEEEEETTE---EEEEEECSSEEEEES-----SSCEEEEGGGEEEEEEEC--------CEEEEEEEESTT----------
T ss_pred eEEEeccCC---ceEEEEecCceEEee-----CCcEEEEhhHeeEEEEEeccCCcccCceEEEEEEEcCC----------
Confidence 455666553 399999998888742 2368999999999996652 11112788888643
Q ss_pred CCCCceEEEEeeecchHHHHHHHHHHHHhhh
Q 021238 255 SPDGRVRYKFASFWNRNHALRQLQRTAKNYH 285 (315)
Q Consensus 255 ~~~~~~~~~F~sf~~rd~~~~~l~~~~~~~~ 285 (315)
+..|.|++. +|++ |..|.+..+..+
T Consensus 228 ----~~~~~Fs~I-dreE-~~~L~~ylk~k~ 252 (261)
T 2gcl_A 228 ----RGSTTFANI-SKEE-QQLLEQFLKSKN 252 (261)
T ss_dssp ----CCEEEEEEE-EGGG-HHHHHHHHHHTT
T ss_pred ----CccEEEccc-CHHH-HHHHHHHHHHcC
Confidence 369999986 4555 445556666544
No 76
>1w7p_D VPS36P, YLR417W; ESCRT-II complex, endosomal protein sorting, protein transpo; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=38.02 E-value=6.8 Score=38.15 Aligned_cols=39 Identities=18% Similarity=0.320 Sum_probs=0.0
Q ss_pred eeEEeecceeeeeecCCCceeEEEEecCceeEEEeeccc
Q 021238 193 GRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHA 231 (315)
Q Consensus 193 G~lyis~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~ 231 (315)
|++|+|.+.+||--........+.|++++|..++....+
T Consensus 45 G~~yLTShRiiyvD~~~p~~~s~~l~L~~I~~~e~~agf 83 (566)
T 1w7p_D 45 GRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSGF 83 (566)
T ss_dssp ---------------------------------------
T ss_pred ceEEEEeeeEEEecCCCCcceEEEEEhHHcceeeeeecc
Confidence 999999999999655544467899999999999987553
No 77
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=35.69 E-value=89 Score=24.25 Aligned_cols=73 Identities=5% Similarity=-0.065 Sum_probs=36.6
Q ss_pred cccCCCcccccCCCCceeeccCCc--------ccceeecceeeeeeec--ccce-eE-EeecceeeeeecCCCcee---E
Q 021238 150 LDKQGPTVVHQKPGPLQTIFNLLP--------DEFVELSYSCVIERSF--LYHG-RM-YVSAWHICFHSNAFSRQM---K 214 (315)
Q Consensus 150 ~~k~~~~~~~~k~~~f~~~F~lp~--------~E~l~~~~~c~l~~~~--~~~G-~l-yis~~~~cF~s~~~g~~~---~ 214 (315)
+..+...+..+++++|.++.-.+. ...+.++.++.|...+ .+.. .+ -....+.+|+.+.++... .
T Consensus 46 a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~ 125 (166)
T 2cm5_A 46 CVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGG 125 (166)
T ss_dssp EESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEE
T ss_pred eECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCCCCCCcEEEe
Confidence 334444555567788888763331 2455677778876532 2211 00 112333456666554322 3
Q ss_pred EEEecCce
Q 021238 215 VIIPIGDI 222 (315)
Q Consensus 215 ~~i~~~~i 222 (315)
+.|++.++
T Consensus 126 ~~i~l~~~ 133 (166)
T 2cm5_A 126 CQLGISAK 133 (166)
T ss_dssp EEEETTCC
T ss_pred EEEecccC
Confidence 55555543
No 78
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.65 E-value=1.5e+02 Score=20.81 Aligned_cols=44 Identities=7% Similarity=-0.126 Sum_probs=27.7
Q ss_pred ecceeeeeecCCCceeEEEEecCceeEEEeeccccccC-cEEEEE
Q 021238 198 SAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINP-AITIIL 241 (315)
Q Consensus 198 s~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~~~~~-~i~i~~ 241 (315)
..+.++||.+......+-+|++.++..|+.......-+ .+.|.+
T Consensus 32 ~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~ 76 (115)
T 2dn6_A 32 KPNIISYYVSEDLKDKKGDILLDENCCVESLPDKDGKKCLFLVKC 76 (115)
T ss_dssp CSSCEEEESSTTCSSEEEEECCCTTCEEEEECCCTTCCSEEEEEC
T ss_pred ECCEEEEeCCCCCcccCcEEEecCcEEEEECCCCCCCeeEEEEEe
Confidence 34556776655445678899999988887653322222 566765
No 79
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=28.28 E-value=1.3e+02 Score=21.54 Aligned_cols=44 Identities=11% Similarity=0.339 Sum_probs=27.0
Q ss_pred ecceeeeeecCCCceeEEEEecCceeEEEeeccc---cccCcEEEEE
Q 021238 198 SAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHA---FINPAITIIL 241 (315)
Q Consensus 198 s~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~---~~~~~i~i~~ 241 (315)
..+.++||.+....+.+-+|++.++..|...... .-...+.|.+
T Consensus 38 ~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~ 84 (125)
T 1eaz_A 38 DENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVT 84 (125)
T ss_dssp CSSEEEEESSTTCSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEEC
T ss_pred eCCEEEEEcCCCCCcceeEEEcccceEEeeccccccCCcCCEEEEEe
Confidence 4456777765544456678999999888763211 1122567765
No 80
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=26.68 E-value=1.7e+02 Score=20.71 Aligned_cols=40 Identities=18% Similarity=0.295 Sum_probs=27.5
Q ss_pred ecceeeeeecCCCceeEEEEecCceeEEEeeccccccCcEEEEE
Q 021238 198 SAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIIL 241 (315)
Q Consensus 198 s~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~~~~~~i~i~~ 241 (315)
..+.++||.+......+-.|++.++..|+... ...+.|.+
T Consensus 33 ~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~----~~~F~i~~ 72 (115)
T 2cod_A 33 DGLSISYYNNEKEMYSKGIIPLSAISTVRVQG----DNKFEVVT 72 (115)
T ss_dssp CSSEEEEEESSCCSSCCCEEETTTEEEEEEET----TTEEEEEE
T ss_pred ECCEEEEEcCCCCcccCCEEECCcceEEEeCC----CCEEEEEe
Confidence 34556666665444567789999999888765 23677776
Done!