Your job contains 1 sequence.
>021239
MVQLLQPFRFSSIAPRRFFSLFPSFSQNGRRDAITCIGMNIHSLSSAAEVPEFDDEPHDD
AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKG
RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP
DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH
YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK
VNILEVVNIGSMIRL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021239
(315 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2100038 - symbol:RECA3 "RECA homolog 3" specie... 800 1.2e-79 1
TAIR|locus:2050439 - symbol:RECA2 "A. thaliana recA homol... 579 3.3e-56 1
TIGR_CMR|CHY_1166 - symbol:CHY_1166 "recA protein" specie... 500 7.7e-48 1
TIGR_CMR|SO_3430 - symbol:SO_3430 "recA protein" species:... 490 8.8e-47 1
TIGR_CMR|SPO_2034 - symbol:SPO_2034 "recA protein" specie... 480 1.0e-45 1
UNIPROTKB|P0A7G6 - symbol:recA species:83333 "Escherichia... 477 2.1e-45 1
TIGR_CMR|GSU_0145 - symbol:GSU_0145 "recA protein" specie... 476 2.7e-45 1
DICTYBASE|DDB_G0276073 - symbol:recA "recombinase A" spec... 475 3.4e-45 1
TIGR_CMR|CBU_1054 - symbol:CBU_1054 "recA protein" specie... 474 4.4e-45 1
TIGR_CMR|NSE_0530 - symbol:NSE_0530 "recA protein" specie... 473 5.6e-45 1
TAIR|locus:2207445 - symbol:RECA1 "homolog of bacterial R... 460 1.3e-43 1
UNIPROTKB|P0A5U4 - symbol:recA "Protein RecA" species:177... 462 4.0e-43 1
UNIPROTKB|P45383 - symbol:recA "Protein RecA" species:243... 455 4.5e-43 1
TIGR_CMR|VC_0543 - symbol:VC_0543 "recA protein" species:... 455 4.5e-43 1
UNIPROTKB|P16971 - symbol:recA "Protein RecA" species:224... 454 5.7e-43 1
TIGR_CMR|CJE_1845 - symbol:CJE_1845 "recA protein" specie... 453 7.3e-43 1
TIGR_CMR|BA_3915 - symbol:BA_3915 "recA protein, group I ... 452 9.3e-43 1
TIGR_CMR|DET_1606 - symbol:DET_1606 "recA protein" specie... 449 1.9e-42 1
TIGR_CMR|ECH_1109 - symbol:ECH_1109 "recA protein" specie... 446 4.0e-42 1
TIGR_CMR|APH_1354 - symbol:APH_1354 "recA protein" specie... 438 2.8e-41 1
TAIR|locus:2103131 - symbol:AT3G32920 species:3702 "Arabi... 395 1.0e-36 1
UNIPROTKB|P78014 - symbol:recA "Protein RecA" species:272... 384 1.5e-35 1
DICTYBASE|DDB_G0274901 - symbol:DDB_G0274901 species:4468... 114 8.7e-09 2
UNIPROTKB|Q0MR21 - symbol:Q0MR21 "DMC1-like protein" spec... 136 1.3e-06 1
UNIPROTKB|Q9C0P6 - symbol:dmc1 "Putative DMC1 protein" sp... 129 8.6e-06 1
ASPGD|ASPL0000094064 - symbol:AN11929 species:162425 "Eme... 131 1.4e-05 1
ASPGD|ASPL0000098803 - symbol:AN11930 species:162425 "Eme... 131 1.4e-05 1
UNIPROTKB|Q5ARI8 - symbol:AN9092.2 "Meiotic recombination... 131 1.4e-05 1
FB|FBgn0003479 - symbol:spn-A "spindle A" species:7227 "D... 123 3.9e-05 1
UNIPROTKB|Q4WAR2 - symbol:AFUA_7G02200 "Meiotic recombina... 120 8.8e-05 1
UNIPROTKB|Q9P972 - symbol:LIM15/DMC1 homolog "LIM15/DMC1 ... 119 0.00012 1
UNIPROTKB|Q6BP40 - symbol:DEHA2E16742g "DEHA2E16742p" spe... 117 0.00018 1
SGD|S000000897 - symbol:RAD51 "Strand exchange protein" s... 116 0.00034 1
UNIPROTKB|G5EGG8 - symbol:rad-51 "RecA/Rad51/Dmc1-like pr... 114 0.00047 1
CGD|CAL0001214 - symbol:RAD51 species:5476 "Candida albic... 114 0.00048 1
UNIPROTKB|Q59UY8 - symbol:RAD51 "Putative uncharacterized... 114 0.00048 1
WB|WBGene00004297 - symbol:rad-51 species:6239 "Caenorhab... 114 0.00056 1
UNIPROTKB|Q95Q25 - symbol:rad-51 "Protein RAD-51, isoform... 114 0.00056 1
UNIPROTKB|Q6FKF0 - symbol:CAGL0L12100g "Similar to unipro... 112 0.00070 1
POMBASE|SPAC8E11.03c - symbol:dmc1 "RecA family ATPase Dm... 111 0.00090 1
>TAIR|locus:2100038 [details] [associations]
symbol:RECA3 "RECA homolog 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA;ISS] [GO:0009432 "SOS response" evidence=IEA;ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0000002 "mitochondrial genome maintenance" evidence=IGI]
[GO:0009408 "response to heat" evidence=IGI] InterPro:IPR003593
InterPro:IPR013765 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005739 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006281 GO:GO:0009408
GO:GO:0006310 GO:GO:0003697 GO:GO:0000002 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 EMBL:AC010927 UniGene:At.39982
UniGene:At.48640 HOGENOM:HOG000264120 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 EMBL:AY072877 EMBL:AY136400 EMBL:BT000214
IPI:IPI00542438 RefSeq:NP_187625.2 ProteinModelPortal:Q8RY99
SMR:Q8RY99 IntAct:Q8RY99 PRIDE:Q8RY99 EnsemblPlants:AT3G10140.1
GeneID:820177 KEGG:ath:AT3G10140 GeneFarm:2673 TAIR:At3g10140
InParanoid:Q8RY99 OMA:CRSETLI PhylomeDB:Q8RY99
ProtClustDB:CLSN2722126 Genevestigator:Q8RY99 GermOnline:AT3G10140
Uniprot:Q8RY99
Length = 389
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 162/280 (57%), Positives = 196/280 (70%)
Query: 28 NGRRDAITCIGMNIHSLSSAAEVPEFD-DEPHDDAKIMQKDNALRLALSQLANDFGKESM 86
NGRR + C G LSS E + + DE DD K+ +KD AL LALSQL+ DF K+S
Sbjct: 23 NGRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEKDTALHLALSQLSGDFDKDSK 82
Query: 87 LSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQK 146
LSL+RF+ RR VISTGSL LDLALG+GGLPKGR+VE+YG+EASGKTTLALH+IKEAQK
Sbjct: 83 LSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVYGKEASGKTTLALHIIKEAQK 142
Query: 147 LGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGXXXXXXXXX 206
LGGYCAYLD ENA+DPSLAE++G++ E LLI++P SAE +L++VD LTKSG
Sbjct: 143 LGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKMLNIVDVLTKSGSVDVIVVDS 202
Query: 207 XXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGL 266
L P+CE+ P+ Y D QSRIMTQALRKIHYS+ S TLI+FLNQVR KS
Sbjct: 203 VAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYSQTLIVFLNQVRSHVKSNMHF 262
Query: 267 GRMDEVTSGGNALKFYAAXXXXXXXXXXFKIADKVNILEV 306
+EVT GGNAL F+AA K A+K++ L V
Sbjct: 263 PHAEEVTCGGNALPFHAAIRLKMIRTGLIKTANKISGLNV 302
>TAIR|locus:2050439 [details] [associations]
symbol:RECA2 "A. thaliana recA homolog 2" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA;ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA;ISS] [GO:0009432 "SOS response"
evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005739 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006281 EMBL:AC005917
GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 GO:GO:0009432
UniGene:At.66366 eggNOG:COG0468 EMBL:BT029745 IPI:IPI00520863
PIR:D84577 RefSeq:NP_179539.2 ProteinModelPortal:Q9ZUP2 SMR:Q9ZUP2
STRING:Q9ZUP2 PaxDb:Q9ZUP2 PRIDE:Q9ZUP2 EnsemblPlants:AT2G19490.1
GeneID:816468 KEGG:ath:AT2G19490 GeneFarm:2671 TAIR:At2g19490
HOGENOM:HOG000264120 InParanoid:Q9ZUP2 KO:K03553 OMA:KAFFREH
PhylomeDB:Q9ZUP2 ProtClustDB:CLSN2681153 Genevestigator:Q9ZUP2
GermOnline:AT2G19490 Gene3D:3.30.250.10 InterPro:IPR023400
PANTHER:PTHR22942:SF1 SUPFAM:SSF54752 TIGRFAMs:TIGR02012
Uniprot:Q9ZUP2
Length = 430
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 121/240 (50%), Positives = 160/240 (66%)
Query: 45 SSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTG 104
+ A + + D + + +K+ AL+ AL Q+ + FGK S++ L R R PV STG
Sbjct: 37 AKAKKKSKSDGNGSSEEGMSKKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTG 96
Query: 105 SLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSL 164
S LD+ALG+GGLPKGR+VEIYG EASGKTTLALHVI EAQK GG C ++D E+ALD SL
Sbjct: 97 SFALDVALGVGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSL 156
Query: 165 AEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGXXXXXXXXXXXXLIPKCEIGVPINGMY 224
A+A+G++ ENLL++QPD E LS+VDTL +SG L+PK E+ + +
Sbjct: 157 AKAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAH 216
Query: 225 SDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAA 284
Q+R+M+QALRK+ +SL S TL+IF+NQVR + G G EVT GGNALKFYA+
Sbjct: 217 MAMQARLMSQALRKLSHSLSLSQTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYAS 276
>TIGR_CMR|CHY_1166 [details] [associations]
symbol:CHY_1166 "recA protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003684 GO:GO:0006281
GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 OMA:TRKGAWY RefSeq:YP_360011.1
ProteinModelPortal:Q3ACX3 SMR:Q3ACX3 STRING:Q3ACX3 GeneID:3727219
KEGG:chy:CHY_1166 PATRIC:21275472
BioCyc:CHYD246194:GJCN-1165-MONOMER Uniprot:Q3ACX3
Length = 343
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 103/219 (47%), Positives = 145/219 (66%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL L +SQ+ FGK S++ L G + VI TGSL LDLALG+GG+P+GR+VEI
Sbjct: 4 KLKALELTISQIEKQFGKGSIMRLGENTGKFQVEVIPTGSLALDLALGVGGVPRGRVVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTT+ALH+I EAQK+GG A++D E+ALDP A+ +G+D ENLL++QPD+ E
Sbjct: 64 FGPESSGKTTVALHIIAEAQKMGGIAAFIDAEHALDPVYAQKLGVDIENLLVSQPDTGEQ 123
Query: 186 LLSVVDTLTKSGXXXXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + ++L +SG L+P+ EI + + Q+R+M+QALRK+ ++ +
Sbjct: 124 ALEIAESLVRSGAIDVIVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAISK 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAA 284
S T+ IF+NQ+R K G G E T GG ALKFYA+
Sbjct: 184 SKTVAIFINQMR--EKVGVMFGN-PETTPGGRALKFYAS 219
>TIGR_CMR|SO_3430 [details] [associations]
symbol:SO_3430 "recA protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0009432 "SOS response" evidence=ISS] HAMAP:MF_00268
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0006281 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:MLIFINQ
RefSeq:NP_718983.1 ProteinModelPortal:Q8EBS0 GeneID:1171105
KEGG:son:SO_3430 PATRIC:23526548 Uniprot:Q8EBS0
Length = 357
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 111/236 (47%), Positives = 143/236 (60%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL LSQ+ FGK S++ L S ISTGSL LD+ALG GGLP GRIVEI
Sbjct: 7 KEKALAAVLSQIEKQFGKGSIMKLGED-RSMDVETISTGSLSLDVALGAGGLPMGRIVEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+ E
Sbjct: 66 YGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQ 125
Query: 186 LLSVVDTLTKSGXXXXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D LT+SG L PK EI I + +R+M+QA+RK+ +L Q
Sbjct: 126 ALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQ 185
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAAXXXXXXXXXXFKIADKV 301
S+TL+IF+NQ+R K G G E T+GGNALKFYA+ K D+V
Sbjct: 186 SNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKEGDEV 238
>TIGR_CMR|SPO_2034 [details] [associations]
symbol:SPO_2034 "recA protein" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0003677 "DNA binding" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
HOGENOM:HOG000264120 KO:K03553 OMA:KAFFREH Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 RefSeq:YP_167265.1
ProteinModelPortal:Q5LRU0 SMR:Q5LRU0 PRIDE:Q5LRU0 GeneID:3193665
KEGG:sil:SPO2034 PATRIC:23377403 Uniprot:Q5LRU0
Length = 347
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 106/236 (44%), Positives = 140/236 (59%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGLP GRIVEI
Sbjct: 9 KQKALDSALAQIERQFGKGSIMRLGGENAIQEIEASSTGSLGLDIALGIGGLPMGRIVEI 68
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LH I E QK GG CA++D E+ALDP A +G+D + LLI+QPD+ E
Sbjct: 69 YGPESSGKTTLTLHCIAEQQKRGGVCAFVDAEHALDPQYARKLGVDLDELLISQPDTGEQ 128
Query: 186 LLSVVDTLTKSGXXXXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG L PK E+ + +R+M+QA+RK+ S+ +
Sbjct: 129 ALEITDTLVRSGAVNMVVVDSVAALTPKSELEGDMGDSSVGVHARLMSQAMRKLTGSISR 188
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAAXXXXXXXXXXFKIADKV 301
S ++IF+NQ+R K G G E T+GGNALKFY++ K D+V
Sbjct: 189 SKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGAIKDRDEV 241
>UNIPROTKB|P0A7G6 [details] [associations]
symbol:recA species:83333 "Escherichia coli K-12"
[GO:0003697 "single-stranded DNA binding" evidence=IEA;IDA]
[GO:0048870 "cell motility" evidence=IMP] [GO:0006974 "response to
DNA damage stimulus" evidence=IEA;IEP] [GO:0009432 "SOS response"
evidence=IEA;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] HAMAP:MF_00268 InterPro:IPR003593
InterPro:IPR013765 InterPro:IPR020584 InterPro:IPR020587
InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006281 GO:GO:0006974 GO:GO:0006310
GO:GO:0003697 GO:GO:0048870 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 EMBL:V00328 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
PIR:G65049 RefSeq:NP_417179.1 RefSeq:YP_490908.1 PDB:1AA3 PDB:1N03
PDB:1REA PDB:1U94 PDB:1U98 PDB:1U99 PDB:1XMS PDB:1XMV PDB:2REB
PDB:2REC PDB:3CMT PDB:3CMU PDB:3CMV PDB:3CMW PDB:3CMX PDBsum:1AA3
PDBsum:1N03 PDBsum:1REA PDBsum:1U94 PDBsum:1U98 PDBsum:1U99
PDBsum:1XMS PDBsum:1XMV PDBsum:2REB PDBsum:2REC PDBsum:3CMT
PDBsum:3CMU PDBsum:3CMV PDBsum:3CMW PDBsum:3CMX
ProteinModelPortal:P0A7G6 SMR:P0A7G6 DIP:DIP-31832N IntAct:P0A7G6
MINT:MINT-1300726 SWISS-2DPAGE:P0A7G6 PaxDb:P0A7G6 PRIDE:P0A7G6
EnsemblBacteria:EBESCT00000004487 EnsemblBacteria:EBESCT00000004488
EnsemblBacteria:EBESCT00000017937 GeneID:12930224 GeneID:947170
KEGG:ecj:Y75_p2637 KEGG:eco:b2699 PATRIC:32120796 EchoBASE:EB0816
EcoGene:EG10823 BioCyc:EcoCyc:EG10823-MONOMER
BioCyc:ECOL316407:JW2669-MONOMER ChEMBL:CHEMBL3434
EvolutionaryTrace:P0A7G6 Genevestigator:P0A7G6 Uniprot:P0A7G6
Length = 353
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 107/219 (48%), Positives = 136/219 (62%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL Q+ FGK S++ L S ISTGSL LD+ALG GGLP GRIVEI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRLGED-RSMDVETISTGSLSLDIALGAGGLPMGRIVEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+ E
Sbjct: 66 YGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQ 125
Query: 186 LLSVVDTLTKSGXXXXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG L PK EI I + +R+M+QA+RK+ +L Q
Sbjct: 126 ALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQ 185
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAA 284
S+TL+IF+NQ+R K G G E T+GGNALKFYA+
Sbjct: 186 SNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYAS 221
>TIGR_CMR|GSU_0145 [details] [associations]
symbol:GSU_0145 "recA protein" species:243231 "Geobacter
sulfurreducens PCA" [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0009432 "SOS response" evidence=ISS] HAMAP:MF_00268
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0006281 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:NP_951207.1 ProteinModelPortal:P62215 SMR:P62215
GeneID:2688015 KEGG:gsu:GSU0145 PATRIC:22023038
BioCyc:GSUL243231:GH27-171-MONOMER Uniprot:P62215
Length = 338
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 98/220 (44%), Positives = 141/220 (64%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+++ A+ LALSQ+ FGK +++ L I TGSL LDLALG+GG+P+GRI+E
Sbjct: 4 EREKAIELALSQIEKQFGKGAIMRLGADEALPDVAAIPTGSLSLDLALGVGGVPRGRIIE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTLALH+ EAQK+GG A++D E+ALD A +G+ ++LL++QPD+ E
Sbjct: 64 IYGPESSGKTTLALHIAAEAQKMGGIAAFVDAEHALDIGYARKLGVKTDDLLVSQPDTGE 123
Query: 185 NLLSVVDTLTKSGXXXXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + + L +SG L+PK EI + + Q+R+M+QALRK+ +
Sbjct: 124 QALEIAEMLVRSGAVDVLVIDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLTGIIS 183
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAA 284
+S+ +IF+NQ+R K G G E T+GGNALKFYA+
Sbjct: 184 KSNCCVIFINQIRM--KIGVMFGN-PETTTGGNALKFYAS 220
>DICTYBASE|DDB_G0276073 [details] [associations]
symbol:recA "recombinase A" species:44689
"Dictyostelium discoideum" [GO:0006281 "DNA repair"
evidence=IEA;IGI] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009432 "SOS response" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
dictyBase:DDB_G0276073 GO:GO:0005739 GO:GO:0005524 GO:GO:0006281
EMBL:AAFI02000014 GenomeReviews:CM000151_GR GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 EMBL:BR000215 RefSeq:XP_643316.1
HSSP:P0A7G6 ProteinModelPortal:Q75JL2 SMR:Q75JL2 STRING:Q75JL2
EnsemblProtists:DDB0231571 GeneID:8620362 KEGG:ddi:DDB_G0276073
OMA:IRRTEWI Uniprot:Q75JL2
Length = 452
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 104/253 (41%), Positives = 156/253 (61%)
Query: 40 NIHSLSSAAEVPEFDDEPHDDAKI----MQKDNA----LRLALSQLANDFGKESMLSLKR 91
N +S SS + DE +D +I K +A + L +L FGK +++ L
Sbjct: 52 NNYSKSSKSGKKSKKDEDDEDGEIETSKTSKKSASSSSMENVLKELEKSFGKGTLMKLGS 111
Query: 92 FFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYC 151
F +++ VI +GS+ LD+ALG+GGLPKGR+ EI+G E+SGKTTLALHVI +AQK GG C
Sbjct: 112 QFSTQKVEVIPSGSMGLDIALGVGGLPKGRVTEIFGPESSGKTTLALHVIAQAQKAGGNC 171
Query: 152 AYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGXXXXXXXXXXXXLI 211
++D E+AL+P A +G++ + L ++QPD+ E L +VD+L +S L+
Sbjct: 172 TFIDAEHALNPQWAARLGVNLDELFVSQPDNGEQALEIVDSLLRSKTMSVIVVDSVAALV 231
Query: 212 PKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDE 271
P+ EI + + Q+R+M+QALRK+ +L S+ ++IF+NQ+R K G G E
Sbjct: 232 PRVEIEGEMGDSHLGVQARLMSQALRKLSPTLKDSNCVLIFINQIRM--KIGVMFGN-PE 288
Query: 272 VTSGGNALKFYAA 284
VTSGGNALKF+++
Sbjct: 289 VTSGGNALKFFSS 301
>TIGR_CMR|CBU_1054 [details] [associations]
symbol:CBU_1054 "recA protein" species:227377 "Coxiella
burnetii RSA 493" [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0009432 "SOS response" evidence=ISS] HAMAP:MF_00268
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0006281 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354
RefSeq:NP_820055.1 ProteinModelPortal:Q83CQ4 SMR:Q83CQ4
PRIDE:Q83CQ4 GeneID:1208955 KEGG:cbu:CBU_1054 PATRIC:17930833
OMA:MLIFINQ BioCyc:CBUR227377:GJ7S-1046-MONOMER Uniprot:Q83CQ4
Length = 343
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 103/219 (47%), Positives = 140/219 (63%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ NAL ALSQ+ FGK S++ L VISTGSL LD+ALG+GGLP+GRI+EI
Sbjct: 4 RSNALNAALSQIERQFGKGSVMRLGDPGLIPDIDVISTGSLGLDIALGVGGLPRGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG EASGKTTLAL I Q++GG A++D E+ALD A +G+ E+LL++QPD+ E
Sbjct: 64 YGPEASGKTTLALQTIASCQRMGGTAAFVDAEHALDAIYAGKLGVKVEDLLVSQPDTGEQ 123
Query: 186 LLSVVDTLTKSGXXXXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG L PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 124 ALEITDMLVRSGAVDLIVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKK 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAA 284
S+TL+IF+NQ+R K G G E T+GGNALKFY++
Sbjct: 184 SNTLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYSS 219
>TIGR_CMR|NSE_0530 [details] [associations]
symbol:NSE_0530 "recA protein" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0003684 GO:GO:0006281 GO:GO:0006310 GO:GO:0003697
EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:YP_506414.1 ProteinModelPortal:Q2GDN2 SMR:Q2GDN2
STRING:Q2GDN2 GeneID:3931948 KEGG:nse:NSE_0530 PATRIC:22681109
BioCyc:NSEN222891:GHFU-550-MONOMER Uniprot:Q2GDN2
Length = 327
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 102/221 (46%), Positives = 145/221 (65%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M +++AL+ + Q+ FGK S+++ + S ISTGS+ LD ALG GG+PKGRI+
Sbjct: 1 MNREDALKGVVVQIEKMFGKGSIMTFSQEPASVE--CISTGSIGLDSALG-GGIPKGRII 57
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTL LH+I EAQK GG CA++D E+ALDP A +G+ E LLI+QPD+
Sbjct: 58 EIFGPESSGKTTLTLHIIAEAQKNGGTCAFIDAEHALDPVYARRLGVKIEELLISQPDTG 117
Query: 184 ENLLSVVDTLTKSGXXXXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L +VD+L KSG L PK EI + ++ Q+R+++QALRKI S+
Sbjct: 118 EQALEIVDSLIKSGAVDVIVVDSVAALTPKAEIEGEMGDLHVGLQARLLSQALRKITASV 177
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAA 284
+S+ +++F+NQ+R K G G E T+GGNALKFY++
Sbjct: 178 SRSNCVVVFINQIRM--KIGVMFGS-PETTTGGNALKFYSS 215
>TAIR|locus:2207445 [details] [associations]
symbol:RECA1 "homolog of bacterial RecA" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;ISS] [GO:0009432 "SOS
response" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 EMBL:CP002684 GO:GO:0005524
GO:GO:0009570 GO:GO:0006281 GO:GO:0006974 UniGene:At.23809
GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 EMBL:AC002986 UniGene:At.317 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 EMBL:L15229 EMBL:AY050885
EMBL:AY113960 EMBL:M98039 IPI:IPI00533410 PIR:A46259 PIR:T01050
RefSeq:NP_565198.1 ProteinModelPortal:Q39199 SMR:Q39199
STRING:Q39199 PaxDb:Q39199 PRIDE:Q39199 EnsemblPlants:AT1G79050.1
GeneID:844246 KEGG:ath:AT1G79050 GeneFarm:2669 TAIR:At1g79050
InParanoid:Q39199 OMA:KIREQVA PhylomeDB:Q39199
Genevestigator:Q39199 GermOnline:AT1G79050 Uniprot:Q39199
Length = 439
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 110/252 (43%), Positives = 149/252 (59%)
Query: 42 HSLSSAAEVPEFDDE------PHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGS 95
H +SS EFDD P D++ + + AL A++ + + FGK S+ L GS
Sbjct: 58 HKISS-----EFDDRINGALSPDADSRFLDRQKALEAAMNDINSSFGKGSVTRL----GS 108
Query: 96 RRGPVIST---GSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCA 152
G ++ T G L LDLALG GGLPKGR+VEIYG E+SGKTTLALH I E QKLGG
Sbjct: 109 AGGALVETFSSGILTLDLALG-GGLPKGRVVEIYGPESSGKTTLALHAIAEVQKLGGNAM 167
Query: 153 YLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGXXXXXXXXXXXXLIP 212
+D E+A DP+ ++A+G+D ENL++ QPD+ E L D + +SG L P
Sbjct: 168 LVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTP 227
Query: 213 KCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEV 272
+ EI I Q+R+M+QALRK+ + ++ +IFLNQ+R+ K G G EV
Sbjct: 228 RAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRY--KIGVYYGN-PEV 284
Query: 273 TSGGNALKFYAA 284
TSGG ALKF+A+
Sbjct: 285 TSGGIALKFFAS 296
>UNIPROTKB|P0A5U4 [details] [associations]
symbol:recA "Protein RecA" species:1773 "Mycobacterium
tuberculosis" [GO:0000150 "recombinase activity" evidence=IDA]
[GO:0000287 "magnesium ion binding" evidence=IDA] [GO:0000725
"recombinational repair" evidence=IMP] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0004520 "endodeoxyribonuclease
activity" evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=IGI;IEP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0009650 "UV protection" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0030145 "manganese
ion binding" evidence=IDA] [GO:0042148 "strand invasion"
evidence=IDA] [GO:0046677 "response to antibiotic" evidence=IEP]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR004042
InterPro:IPR006141 InterPro:IPR006142 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PRINTS:PR00379 PROSITE:PS00321
PROSITE:PS50162 PROSITE:PS50163 PROSITE:PS50817 PROSITE:PS50818
PROSITE:PS50819 SMART:SM00382 GO:GO:0005829 GO:GO:0005524
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842580 GO:GO:0000287 GO:GO:0046677 GO:GO:0030145
GO:GO:0003697 GO:GO:0006314 GO:GO:0004520 GO:GO:0009650
GO:GO:0008094 GO:GO:0009432 GO:GO:0000725 InterPro:IPR003586
InterPro:IPR003587 SMART:SM00305 SMART:SM00306 GO:GO:0016539
GO:GO:0000150 TIGRFAMs:TIGR01443 TIGRFAMs:TIGR01445 GO:GO:0042148
KO:K03553 Gene3D:3.30.250.10 InterPro:IPR023400
PANTHER:PTHR22942:SF1 SUPFAM:SSF54752 TIGRFAMs:TIGR02012
EMBL:X58485 EMBL:AJ000012 EMBL:AJ000011 PIR:S18206
RefSeq:NP_217253.1 RefSeq:NP_337313.1 RefSeq:YP_006516181.1
PDB:1G18 PDB:1G19 PDB:1MO3 PDB:1MO4 PDB:1MO5 PDB:1MO6 PDB:2IMZ
PDB:2IN0 PDB:2IN8 PDB:2IN9 PDB:2L8L PDB:3IFJ PDB:3IGD PDBsum:1G18
PDBsum:1G19 PDBsum:1MO3 PDBsum:1MO4 PDBsum:1MO5 PDBsum:1MO6
PDBsum:2IMZ PDBsum:2IN0 PDBsum:2IN8 PDBsum:2IN9 PDBsum:2L8L
PDBsum:3IFJ PDBsum:3IGD ProteinModelPortal:P0A5U4 SMR:P0A5U4
MEROPS:N10.009 PRIDE:P0A5U4 EnsemblBacteria:EBMYCT00000000048
EnsemblBacteria:EBMYCT00000072309 GeneID:13319464 GeneID:888371
GeneID:925483 KEGG:mtc:MT2806 KEGG:mtu:Rv2737c KEGG:mtv:RVBD_2737c
PATRIC:18127918 TubercuList:Rv2737c eggNOG:COG1372
ProtClustDB:PRK09519 BindingDB:P0A5U4 ChEMBL:CHEMBL1741171
EvolutionaryTrace:P0A5U4 Uniprot:P0A5U4
Length = 790
Score = 462 (167.7 bits), Expect = 4.0e-43, P = 4.0e-43
Identities = 98/221 (44%), Positives = 141/221 (63%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGP--VISTGSLKLDLALGIGGLPKGRIV 123
++ AL LA++Q+ +GK S++ R R P VI TGS+ LD+ALGIGGLP+GR++
Sbjct: 7 REKALELAVAQIEKSYGKGSVM---RLGDEARQPISVIPTGSIALDVALGIGGLPRGRVI 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQ GG A++D E+ALDP A+ +G+D ++LL++QPD+
Sbjct: 64 EIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTG 123
Query: 184 ENLLSVVDTLTKSGXXXXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG L+P+ E+ + + Q+R+M+QALRK+ +L
Sbjct: 124 EQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGAL 183
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAA 284
S T IF+NQ+R K G G E T+GG ALKFYA+
Sbjct: 184 NNSGTTAIFINQLR--DKIGVMFGS-PETTTGGKALKFYAS 221
>UNIPROTKB|P45383 [details] [associations]
symbol:recA "Protein RecA" species:243277 "Vibrio cholerae
O1 biovar El Tor str. N16961" [GO:0006281 "DNA repair"
evidence=IMP] [GO:0006310 "DNA recombination" evidence=IMP]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:MLIFINQ
EMBL:X71969 EMBL:U10162 EMBL:L42384 PIR:E82310 PIR:S46274
RefSeq:NP_230194.1 ProteinModelPortal:P45383 SMR:P45383
PRIDE:P45383 DNASU:2615212 GeneID:2615212 KEGG:vch:VC0543
PATRIC:20080190 Uniprot:P45383
Length = 354
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 103/239 (43%), Positives = 141/239 (58%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRL----GDNRAMDVETISTGSLSLDIALGAGGLPMGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEI+G E+SGKTTL L +I AQ+ G CA++D E+ALDP A+ +G++ + LL++QPD+
Sbjct: 61 VEIFGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQPDT 120
Query: 183 AENLLSVVDTLTKSGXXXXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG L PK EI + + Q+R+++QA+RK+ +
Sbjct: 121 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAAXXXXXXXXXXFKIADKV 301
L QS+ + IF+NQ+R K G G E T+GGNALKFYA+ K ++V
Sbjct: 181 LKQSNCMCIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKEGEEV 236
>TIGR_CMR|VC_0543 [details] [associations]
symbol:VC_0543 "recA protein" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006310 "DNA
recombination" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:MLIFINQ
EMBL:X71969 EMBL:U10162 EMBL:L42384 PIR:E82310 PIR:S46274
RefSeq:NP_230194.1 ProteinModelPortal:P45383 SMR:P45383
PRIDE:P45383 DNASU:2615212 GeneID:2615212 KEGG:vch:VC0543
PATRIC:20080190 Uniprot:P45383
Length = 354
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 103/239 (43%), Positives = 141/239 (58%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRL----GDNRAMDVETISTGSLSLDIALGAGGLPMGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEI+G E+SGKTTL L +I AQ+ G CA++D E+ALDP A+ +G++ + LL++QPD+
Sbjct: 61 VEIFGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQPDT 120
Query: 183 AENLLSVVDTLTKSGXXXXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG L PK EI + + Q+R+++QA+RK+ +
Sbjct: 121 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAAXXXXXXXXXXFKIADKV 301
L QS+ + IF+NQ+R K G G E T+GGNALKFYA+ K ++V
Sbjct: 181 LKQSNCMCIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKEGEEV 236
>UNIPROTKB|P16971 [details] [associations]
symbol:recA "Protein RecA" species:224308 "Bacillus
subtilis subsp. subtilis str. 168" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0003697 EMBL:AL009126
GenomeReviews:AL009126_GR GO:GO:0009295 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 EMBL:X52132 EMBL:U87792
EMBL:U56238 PIR:S10370 RefSeq:NP_389576.2 ProteinModelPortal:P16971
SMR:P16971 IntAct:P16971 EnsemblBacteria:EBBACT00000002648
GeneID:939497 KEGG:bsu:BSU16940 PATRIC:18975195 GenoList:BSU16940
BioCyc:BSUB:BSU16940-MONOMER Uniprot:P16971
Length = 348
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 97/216 (44%), Positives = 136/216 (62%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL +AL Q+ FGK S++ L +R V S GSL LD ALGIGG P+GRI+E+YG
Sbjct: 7 ALDMALKQIEKQFGKGSIMKLGEKTDTRISTVPS-GSLALDTALGIGGYPRGRIIEVYGP 65
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTT+ALH I E Q+ GG A++D E+ALDP A+ +G++ E LL++QPD+ E L
Sbjct: 66 ESSGKTTVALHAIAEVQQQGGQAAFIDAEHALDPVYAQKLGVNIEELLLSQPDTGEQALE 125
Query: 189 VVDTLTKSGXXXXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ + L +SG L+PK EI + + Q+R+M+QALRK+ ++ +S T
Sbjct: 126 IAEALVRSGAVDIVVVDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGAINKSKT 185
Query: 249 LIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAA 284
+ IF+NQ+R K G G E T GG ALKFY++
Sbjct: 186 IAIFINQIR--EKVGVMFGN-PETTPGGRALKFYSS 218
>TIGR_CMR|CJE_1845 [details] [associations]
symbol:CJE_1845 "recA protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 RefSeq:YP_179815.1
ProteinModelPortal:Q5HSC0 SMR:Q5HSC0 STRING:Q5HSC0 GeneID:3232472
KEGG:cjr:CJE1845 PATRIC:20045522 OMA:TRKGAWY
BioCyc:CJEJ195099:GJC0-1884-MONOMER Uniprot:Q5HSC0
Length = 343
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 98/219 (44%), Positives = 136/219 (62%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K +L AL L FGK ++L L + I TGS+ LDLALGIGG+PKGRI+EI
Sbjct: 5 KRKSLDAALKSLDKTFGKGTILRLGDKEVEQIDS-IGTGSVGLDLALGIGGVPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LH+I E QK GG CA++D E+ALD A+ +G++ ++L ++QPD E
Sbjct: 64 YGPESSGKTTLTLHIIAECQKAGGVCAFIDAEHALDVKYAKNLGVNTDDLYVSQPDFGEQ 123
Query: 186 LLSVVDTLTKSGXXXXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L +V+T+ +SG L PK EI + + Q+R+M+QALRK+ + +
Sbjct: 124 ALEIVETIARSGAVDLIVVDSVAALTPKAEIEGDMGDQHVGLQARLMSQALRKLTGIVHK 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAA 284
+T +IF+NQ+R G G E T+GGNALKFYA+
Sbjct: 184 MNTTVIFINQIRMKI-GAMGYGT-PETTTGGNALKFYAS 220
>TIGR_CMR|BA_3915 [details] [associations]
symbol:BA_3915 "recA protein, group I intron-containing"
species:198094 "Bacillus anthracis str. Ames" [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006281
GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 EMBL:AF229167 RefSeq:NP_846162.1
RefSeq:YP_029881.1 ProteinModelPortal:Q9APZ2 SMR:Q9APZ2
IntAct:Q9APZ2 EnsemblBacteria:EBBACT00000011833
EnsemblBacteria:EBBACT00000023909 EnsemblBacteria:EBBACT00000082851
GeneID:1087627 GeneID:2850041 KEGG:ban:BA_3915 KEGG:bat:BAS3629
PATRIC:18785420 ProtClustDB:PRK09354 Uniprot:Q9APZ2
Length = 343
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 93/215 (43%), Positives = 137/215 (63%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL +AL Q+ FGK S++ L R+ +S+GSL LD+ALG+GG P+GRI+EIYG
Sbjct: 7 ALDMALKQIEKQFGKGSIMKLGEQ-AERKVSTVSSGSLALDVALGVGGYPRGRIIEIYGP 65
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTT++LH I E Q+ GG A++D E+A+DP A+ +G++ + LL++QPD+ E L
Sbjct: 66 ESSGKTTVSLHAIAEVQRQGGQAAFIDAEHAMDPVYAQKLGVNIDELLLSQPDTGEQGLE 125
Query: 189 VVDTLTKSGXXXXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ + L +SG L+PK EI + + Q+R+M+QALRK+ ++ +S T
Sbjct: 126 IAEALVRSGAVDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGAINKSKT 185
Query: 249 LIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYA 283
+ IF+NQ+R K G G E T GG ALKFY+
Sbjct: 186 IAIFINQIR--EKVGVMFGN-PETTPGGRALKFYS 217
>TIGR_CMR|DET_1606 [details] [associations]
symbol:DET_1606 "recA protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] HAMAP:MF_00268 InterPro:IPR003593
InterPro:IPR013765 InterPro:IPR020584 InterPro:IPR020587
InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003684 GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:YP_182301.1 ProteinModelPortal:Q3Z648 SMR:Q3Z648
STRING:Q3Z648 GeneID:3229079 KEGG:det:DET1606 PATRIC:21610224
BioCyc:DETH243164:GJNF-1607-MONOMER Uniprot:Q3Z648
Length = 337
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 97/220 (44%), Positives = 135/220 (61%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+KD AL L + + FGK S++ L + I T SL LD+ALG+GG+P+GRI E
Sbjct: 4 EKDKALELTVGIIEKRFGKGSIMKLSDPTFRQTVEFIPTSSLALDIALGVGGIPRGRISE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
I+G E SGKTTLA H+I +AQK+G AY+DVE+ALDP A G++ + LLI+QPD+ E
Sbjct: 64 IFGPEGSGKTTLAQHIIAQAQKMGEKAAYIDVEHALDPKYASTCGVNLDELLISQPDTGE 123
Query: 185 NLLSVVDTLTKSGXXXXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + + L +S L+PK EI + + Q+R+M+QALRK+ S+
Sbjct: 124 EALGIAEELVRSTAIGVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTASIG 183
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAA 284
Q+ T +IF+NQ+R K G G EVT GG ALKFY++
Sbjct: 184 QTRTAVIFINQLR--EKVGVMFGN-PEVTPGGRALKFYSS 220
>TIGR_CMR|ECH_1109 [details] [associations]
symbol:ECH_1109 "recA protein" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:YP_507893.1 ProteinModelPortal:Q2GF90 SMR:Q2GF90
STRING:Q2GF90 GeneID:3927794 KEGG:ech:ECH_1109 PATRIC:20577554
BioCyc:ECHA205920:GJNR-1112-MONOMER Uniprot:Q2GF90
Length = 357
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 96/221 (43%), Positives = 143/221 (64%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGS-RRGPVISTGSLKLDLALGIGGLPKGRIV 123
++ AL A+SQ+ FG+ +++ LK+ G+ + ISTGS+ LD ALGIGG PKGRIV
Sbjct: 10 ERQKALDSAISQIEKAFGRGAIMKLKQ--GAIEKIDSISTGSIALDTALGIGGFPKGRIV 67
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTLALHVI E+QK GG CA++D E+ALD A +G++ +L+++QPD+
Sbjct: 68 EIFGPESSGKTTLALHVIAESQKKGGNCAFIDAEHALDIMYARKLGVNTGDLIVSQPDTG 127
Query: 184 ENLLSVVDTLTKSGXXXXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L +V+ L SG L P+ EI + + Q+R+++ ALRK+ +
Sbjct: 128 EQALHIVEYLVCSGAIDVIVVDSVAALTPRAEIEGDMGDQHMGLQARLLSHALRKLTSIV 187
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAA 284
+++ ++IF+NQ+R K G G E T+GGNALKFY++
Sbjct: 188 SKANCVLIFINQIRM--KIGVVYGN-PETTTGGNALKFYSS 225
>TIGR_CMR|APH_1354 [details] [associations]
symbol:APH_1354 "recA protein" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0003684 GO:GO:0006281 GO:GO:0006310 GO:GO:0003697
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 OMA:IRRTEWI ProtClustDB:PRK09354
RefSeq:YP_505854.1 ProteinModelPortal:Q2GIE7 SMR:Q2GIE7
STRING:Q2GIE7 GeneID:3931040 KEGG:aph:APH_1354 PATRIC:20951508
BioCyc:APHA212042:GHPM-1354-MONOMER Uniprot:Q2GIE7
Length = 354
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 92/219 (42%), Positives = 137/219 (62%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ A+ Q+ FG+ S++ L+ +STGS+ LD ALG+GGLP+GRI+EI
Sbjct: 8 KQRAVDAAIGQIERAFGRGSIMRLQNS-PVEAVECVSTGSIALDAALGVGGLPRGRIIEI 66
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTLALHVI EAQK GG CA++D E+ALD A +G+ +L+++QPD+ E
Sbjct: 67 FGPESSGKTTLALHVIAEAQKNGGACAFIDAEHALDTLYARKLGVSVGDLIVSQPDTGEQ 126
Query: 186 LLSVVDTLTKSGXXXXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L +V+ L SG L P+ EI + + Q+R+++ ALRK+ + +
Sbjct: 127 ALHIVEHLVNSGAVDVIVVDSVAALTPRAEIEGDMGDQHMGLQARLLSHALRKLTSIVSK 186
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAA 284
++ L++F+NQ+R K G G EVT+GG+ALKFY +
Sbjct: 187 ANCLLVFINQIRM--KIGVVYGN-PEVTTGGSALKFYTS 222
>TAIR|locus:2103131 [details] [associations]
symbol:AT3G32920 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006310 "DNA recombination" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;ISS] [GO:0009432 "SOS
response" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006281 GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 KO:K03553 PANTHER:PTHR22942:SF1
EMBL:AP002067 IPI:IPI00528929 RefSeq:NP_189781.4 UniGene:At.53642
ProteinModelPortal:Q3EAS6 SMR:Q3EAS6 GeneID:823055
KEGG:ath:AT3G32920 TAIR:At3g32920 HOGENOM:HOG000034536 OMA:SGRELEW
ArrayExpress:Q3EAS6 Genevestigator:Q3EAS6 GermOnline:AT3G32920
Uniprot:Q3EAS6
Length = 226
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 94/195 (48%), Positives = 119/195 (61%)
Query: 89 LKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLG 148
L R R PV STGS LD+ALG+GGLPKGR+VEIYG EASGKT LALH++
Sbjct: 3 LSRAVSPRNVPVFSTGSFALDVALGVGGLPKGRLVEIYGPEASGKTALALHMLSML---- 58
Query: 149 GYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGXXXXXXXXXXX 208
L SLA+A+G++ ENLL++QPD + LS+VDTL +SG
Sbjct: 59 -----------LIRSLAKAIGVNTENLLLSQPDCGKQALSLVDTLIQSGSVDVIVVDSVA 107
Query: 209 XLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGR 268
L+PK E+ + + Q+R+M+QALRK +SL S TL+IF+NQVR + G
Sbjct: 108 ALVPKGELDGEMGDAHMAIQARLMSQALRKFSHSLLLSQTLLIFINQVR------ERFGG 161
Query: 269 MDEVTSGGNALKFYA 283
EVTSGGNALKFYA
Sbjct: 162 PTEVTSGGNALKFYA 176
>UNIPROTKB|P78014 [details] [associations]
symbol:recA "Protein RecA" species:272634 "Mycoplasma
pneumoniae M129" [GO:0005515 "protein binding" evidence=IPI]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 EMBL:U00089
GenomeReviews:U00089_GR GO:GO:0009432 eggNOG:COG0468 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
PIR:S73678 RefSeq:NP_110178.1 ProteinModelPortal:P78014
IntAct:P78014 GeneID:877213 KEGG:mpn:MPN490 PATRIC:20022406
BioCyc:MPNE272634:GJ6Z-531-MONOMER Uniprot:P78014
Length = 336
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 91/225 (40%), Positives = 133/225 (59%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPK 119
++QK+ + +SQ N F + + L+ F +++ +STGSL LD ALG GGLP
Sbjct: 1 MVQKE-MINKKISQ-DNSFIQNNNLADFDFLDAKKNSEIKTVSTGSLHLDEALGTGGLPL 58
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRIVE+YG E+SGKTT+ALH + QK G Y+D E ALD S A+A+GID LL+A
Sbjct: 59 GRIVELYGNESSGKTTVALHAVASFQKAGKVACYIDAEGALDLSYAKAIGIDLGKLLVAH 118
Query: 180 PDSAENLLSVVDTLTKSGXXXXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
P EN +++++L K+ LIPK E+ ++ +R+M++ LR++
Sbjct: 119 PKHGENAFALMESLIKTNKVALIVVDSVAALIPKQELEGNMDDQTIGLHARMMSKGLRRV 178
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAA 284
L +S T ++F+NQ+R K G G EVT+GG ALKFYA+
Sbjct: 179 QSLLPESDTCLLFINQLR--EKPGVMFGN-GEVTTGGRALKFYAS 220
>DICTYBASE|DDB_G0274901 [details] [associations]
symbol:DDB_G0274901 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009432 "SOS response" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS50162 SMART:SM00382
dictyBase:DDB_G0274901 GO:GO:0005524 GO:GO:0006281
EMBL:AAFI02000012 GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 PANTHER:PTHR22942:SF1
RefSeq:XP_644118.1 ProteinModelPortal:Q555F1
EnsemblProtists:DDB0217538 GeneID:8619547 KEGG:ddi:DDB_G0274901
Uniprot:Q555F1
Length = 458
Score = 114 (45.2 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 92 FFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQK 146
F G + P I++G LD L IGGLP I+EIYG ++GK+TL++ ++ K
Sbjct: 76 FEGFEKIPTITSGITSLDYQLQIGGLPLNHIIEIYGDSSTGKSTLSMFILSNLIK 130
Score = 87 (35.7 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 25/108 (23%), Positives = 47/108 (43%)
Query: 153 YLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGXXXXXXXXXXXXLIP 212
Y+D EN+ + A +G++ N + QP+++E ++ K+ L+
Sbjct: 157 YIDSENSFNSEWASKIGMNLSNCTVFQPNNSEEAFELIKKSLKNQIFKVIILDSLSSLMS 216
Query: 213 KCEIGVP-INGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFS 259
+I + Y + +T L +I L S+ IF NQ+R+S
Sbjct: 217 IKDIESNLVENHYQNIGFDWITSNLNEISNLLIDSNCCFIFTNQMRYS 264
>UNIPROTKB|Q0MR21 [details] [associations]
symbol:Q0MR21 "DMC1-like protein" species:37727
"Talaromyces marneffei" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
EMBL:DQ863299 ProteinModelPortal:Q0MR21 Uniprot:Q0MR21
Length = 337
Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 48/171 (28%), Positives = 81/171 (47%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLA--LHVIKEAQK-LGG---YCAYL 154
ISTGS + D LG GG I E+YG GKT L+ + VI + K +GG AY+
Sbjct: 98 ISTGSKQFDTILG-GGFQSSSISEVYGEFRCGKTQLSHTMSVIAQLPKEMGGGEGKVAYI 156
Query: 155 DVENALDPS----LAEAMGIDAE----NLLIAQPDSAENLLSVVDTLTKSGXXXXXXXXX 206
D E P +AE G+DAE N+ A+ ++E+ L +++TL+K
Sbjct: 157 DTEGTFRPDRIAQIAERYGLDAESTQENISYARALNSEHQLELLNTLSKEFAGGQYRLLV 216
Query: 207 XXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVR 257
++ + G ++ Q ++ Q L ++ + + + ++ NQV+
Sbjct: 217 IDSIMNCFRVDFSGRGELAERQQKL-NQFLIRLSHLAEEFNVCVLMTNQVQ 266
>UNIPROTKB|Q9C0P6 [details] [associations]
symbol:dmc1 "Putative DMC1 protein" species:5322 "Pleurotus
ostreatus" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150 HSSP:Q06609
EMBL:AJ311528 EMBL:AJ308557 ProteinModelPortal:Q9C0P6
Uniprot:Q9C0P6
Length = 347
Score = 129 (50.5 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 48/178 (26%), Positives = 85/178 (47%)
Query: 96 RRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLA--LHVIKEAQK-LGGYC- 151
+R ISTGS +D+ LG GG+ + E+YG +GKT LA + V+ + LGG
Sbjct: 105 KRVNTISTGSKNVDVILG-GGIMSQSVSEVYGEFRTGKTQLAHTMSVVAQLPPDLGGASG 163
Query: 152 --AYLDVENALDP----SLAEAMGIDA----ENLLIAQPDSAENLLSVVDTLT-KSGXXX 200
AY+D E P S+AE G+D EN+L A+ ++E+ + +++ + +
Sbjct: 164 KVAYIDTEGTFRPDRIRSIAERFGVDGSLALENILYARAFNSEHQMELINECSMRFAEDK 223
Query: 201 XXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFL-NQVR 257
++ + G S+ Q ++ Q L ++ L + + + + L NQV+
Sbjct: 224 DFRLLIVDSIMALFRVDYSGRGELSERQQKL-AQMLSRLT-KLSEEYNIAVLLTNQVQ 279
>ASPGD|ASPL0000094064 [details] [associations]
symbol:AN11929 species:162425 "Emericella nidulans"
[GO:0032545 "CURI complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0034456 "UTP-C complex" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000028 "ribosomal small
subunit assembly" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR012677
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0006281 Gene3D:3.30.70.330 EMBL:BN001306
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 KO:K10872
InterPro:IPR013632 Pfam:PF08423 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 47/171 (27%), Positives = 80/171 (46%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLA--LHVIKEAQK-LGGY---CAYL 154
ISTGS + D LG GG I E++G GKT L+ + V+ + K +GG AY+
Sbjct: 98 ISTGSKQFDSILG-GGFQSMSISEVFGEFRCGKTQLSHTMSVVAQLPKDMGGAEGKVAYI 156
Query: 155 DVENALDPS----LAEAMGIDA----ENLLIAQPDSAENLLSVVDTLTKSGXXXXXXXXX 206
D E P +AE G+D EN+ A+ ++E+ L +++TL+K
Sbjct: 157 DTEGTFRPERIGQIAERFGVDPDSAKENIAYARALNSEHQLELLNTLSKEFVGGEYRLLI 216
Query: 207 XXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVR 257
++ + G +D Q ++ Q L K+ + + + ++ NQV+
Sbjct: 217 IDSIMNCFRVDFCGRGELADRQQKL-NQFLMKLAHMAEEFNVCVLMTNQVQ 266
>ASPGD|ASPL0000098803 [details] [associations]
symbol:AN11930 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000150 "recombinase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0006311 "meiotic gene conversion" evidence=IEA]
[GO:0000709 "meiotic joint molecule formation" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR012677 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
Gene3D:3.30.70.330 EMBL:BN001306 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094
eggNOG:COG0468 KO:K10872 InterPro:IPR013632 Pfam:PF08423
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 47/171 (27%), Positives = 80/171 (46%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLA--LHVIKEAQK-LGGY---CAYL 154
ISTGS + D LG GG I E++G GKT L+ + V+ + K +GG AY+
Sbjct: 98 ISTGSKQFDSILG-GGFQSMSISEVFGEFRCGKTQLSHTMSVVAQLPKDMGGAEGKVAYI 156
Query: 155 DVENALDPS----LAEAMGIDA----ENLLIAQPDSAENLLSVVDTLTKSGXXXXXXXXX 206
D E P +AE G+D EN+ A+ ++E+ L +++TL+K
Sbjct: 157 DTEGTFRPERIGQIAERFGVDPDSAKENIAYARALNSEHQLELLNTLSKEFVGGEYRLLI 216
Query: 207 XXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVR 257
++ + G +D Q ++ Q L K+ + + + ++ NQV+
Sbjct: 217 IDSIMNCFRVDFCGRGELADRQQKL-NQFLMKLAHMAEEFNVCVLMTNQVQ 266
>UNIPROTKB|Q5ARI8 [details] [associations]
symbol:AN9092.2 "Meiotic recombination protein (Dmc1),
putative (AFU_orthologue; AFUA_7G02200)" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR012677
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0006281 Gene3D:3.30.70.330 EMBL:BN001306
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 KO:K10872
InterPro:IPR013632 Pfam:PF08423 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 47/171 (27%), Positives = 80/171 (46%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLA--LHVIKEAQK-LGGY---CAYL 154
ISTGS + D LG GG I E++G GKT L+ + V+ + K +GG AY+
Sbjct: 98 ISTGSKQFDSILG-GGFQSMSISEVFGEFRCGKTQLSHTMSVVAQLPKDMGGAEGKVAYI 156
Query: 155 DVENALDPS----LAEAMGIDA----ENLLIAQPDSAENLLSVVDTLTKSGXXXXXXXXX 206
D E P +AE G+D EN+ A+ ++E+ L +++TL+K
Sbjct: 157 DTEGTFRPERIGQIAERFGVDPDSAKENIAYARALNSEHQLELLNTLSKEFVGGEYRLLI 216
Query: 207 XXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVR 257
++ + G +D Q ++ Q L K+ + + + ++ NQV+
Sbjct: 217 IDSIMNCFRVDFCGRGELADRQQKL-NQFLMKLAHMAEEFNVCVLMTNQVQ 266
>FB|FBgn0003479 [details] [associations]
symbol:spn-A "spindle A" species:7227 "Drosophila
melanogaster" [GO:0007294 "germarium-derived oocyte fate
determination" evidence=IGI] [GO:0048477 "oogenesis"
evidence=IMP;TAS] [GO:0008298 "intracellular mRNA localization"
evidence=IMP;TAS] [GO:0009951 "polarity specification of
dorsal/ventral axis" evidence=IMP] [GO:0030717 "karyosome
formation" evidence=IMP] [GO:0009949 "polarity specification of
anterior/posterior axis" evidence=IMP] [GO:0006281 "DNA repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;NAS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0009994 "oocyte differentiation" evidence=NAS]
[GO:0000075 "cell cycle checkpoint" evidence=IMP] [GO:0007143
"female meiosis" evidence=IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0045003 "double-strand break repair via synthesis-dependent
strand annealing" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0009949 GO:GO:0007294 GO:GO:0003684 GO:GO:0007143
GO:GO:0008298 GO:GO:0030717 GO:GO:0000075 GO:GO:0045003
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:D37788 EMBL:D17726 EMBL:L41342
EMBL:BT001791 RefSeq:NP_524583.1 RefSeq:NP_733342.1 UniGene:Dm.1913
ProteinModelPortal:Q27297 SMR:Q27297 DIP:DIP-20846N IntAct:Q27297
MINT:MINT-337614 STRING:Q27297 PaxDb:Q27297 PRIDE:Q27297
EnsemblMetazoa:FBtr0085589 GeneID:43577 KEGG:dme:Dmel_CG7948
CTD:43577 FlyBase:FBgn0003479 InParanoid:Q27297 OrthoDB:EOG4P2NHW
PhylomeDB:Q27297 GenomeRNAi:43577 NextBio:834653 Bgee:Q27297
GermOnline:CG7948 GO:GO:0009951 Uniprot:Q27297
Length = 336
Score = 123 (48.4 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 39/98 (39%), Positives = 50/98 (51%)
Query: 78 ANDFGKESMLSLKRFFGSRRGPV-ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKT-- 134
AN LS + F+ R V +STGS +LD LG GG+ G I EI+G GKT
Sbjct: 75 ANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLG-GGIETGSITEIFGEFRCGKTQL 133
Query: 135 --TLALHV-IKEAQKLG-GYCAYLDVENALDPSLAEAM 168
TLA+ + +QK G G C Y+D EN P A+
Sbjct: 134 CHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAI 171
>UNIPROTKB|Q4WAR2 [details] [associations]
symbol:AFUA_7G02200 "Meiotic recombination protein (Dmc1),
putative" species:330879 "Aspergillus fumigatus Af293" [GO:0000150
"recombinase activity" evidence=ISS] [GO:0003690 "double-stranded
DNA binding" evidence=ISS] [GO:0003697 "single-stranded DNA
binding" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094
HOGENOM:HOG000227426 KO:K10872 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
EMBL:AAHF01000015 RefSeq:XP_746712.1 ProteinModelPortal:Q4WAR2
STRING:Q4WAR2 EnsemblFungi:CADAFUAT00001154 GeneID:3504290
KEGG:afm:AFUA_7G02200 OMA:HAASTRI Uniprot:Q4WAR2
Length = 338
Score = 120 (47.3 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 44/171 (25%), Positives = 79/171 (46%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLA--LHVIKEAQK-LGGY---CAYL 154
ISTGS + D LG GG I E++G GKT L+ + V+ + K +GG AY+
Sbjct: 99 ISTGSKQFDSILG-GGFQSMSISEVFGEFRCGKTQLSHTMSVVAQLPKEMGGADGKVAYI 157
Query: 155 DVENALDPS----LAEAMGIDA----ENLLIAQPDSAENLLSVVDTLTKSGXXXXXXXXX 206
D E P +AE +D EN+ A+ ++E+ L +++TL++
Sbjct: 158 DTEGTFRPERIAQIAERFSVDPDSAQENIAYARALNSEHQLELLNTLSREFAGGEYRLLI 217
Query: 207 XXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVR 257
++ + G +D Q ++ Q L ++ + + + ++ NQV+
Sbjct: 218 IDSIMNCFRVDYCGRGELADRQQKL-NQFLMRLAHMAEEFNVCVLMTNQVQ 267
>UNIPROTKB|Q9P972 [details] [associations]
symbol:LIM15/DMC1 homolog "LIM15/DMC1 homolog protein"
species:5346 "Coprinopsis cinerea" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
HSSP:Q06609 EMBL:AB036801 ProteinModelPortal:Q9P972 Uniprot:Q9P972
Length = 345
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 47/178 (26%), Positives = 82/178 (46%)
Query: 96 RRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKL----GGYC 151
+R VISTGS +D LG GG+ I E+YG +GKT LA H + +L GG
Sbjct: 103 KRVLVISTGSKLVDGILG-GGVMSQSITEVYGEYRTGKTQLA-HTMSVVAQLPPEYGGAA 160
Query: 152 ---AYLDVENALDP----SLAEAMGIDA----ENLLIAQPDSAENLLSVVDTLT-KSGXX 199
AY+D E P ++A+ G+D EN+L A+ ++E+ + +++ + +
Sbjct: 161 GKVAYIDTEGTFRPDRIRAIADRFGVDGTMALENILYARAFNSEHQMELINECSARFAED 220
Query: 200 XXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVR 257
++ + G S+ Q ++ Q L K+ + + ++ NQV+
Sbjct: 221 KDFRLLIIDSIMALFRVDYSGRGELSERQQKL-AQMLSKLTKLSEEFNIAVLMTNQVQ 277
>UNIPROTKB|Q6BP40 [details] [associations]
symbol:DEHA2E16742g "DEHA2E16742p" species:284592
"Debaryomyces hansenii CBS767" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0016887 GO:GO:0003690 GO:GO:0003697
GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094 EMBL:CR382137
GenomeReviews:CR382137_GR HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 RefSeq:XP_460030.2 ProteinModelPortal:Q6BP40
STRING:Q6BP40 GeneID:2902232 KEGG:dha:DEHA2E16742g Uniprot:Q6BP40
Length = 330
Score = 117 (46.2 bits), Expect = 0.00018, P = 0.00018
Identities = 48/176 (27%), Positives = 79/176 (44%)
Query: 97 RGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQ---KLGGY--- 150
R +STGS +LD LG GG+ I E++G GKT L + AQ ++GG
Sbjct: 89 RAFTLSTGSKQLDDVLG-GGVSSMSITEVFGEFRCGKTQLCHTLCVTAQLPKEMGGSEGK 147
Query: 151 CAYLDVENALDP----SLAEAMGIDA----ENLLIAQPDSAENLLSVVDTLTKSGXXXXX 202
AY+D E P S+AE +DA EN+ A+ ++E+ + + + L
Sbjct: 148 VAYIDTEGTFRPDRIRSIAERFQVDADACLENISYARALNSEHQMELAEQLGLQFADGTY 207
Query: 203 XXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFL-NQVR 257
++ + G +D Q ++ Q L + L + + + +FL NQV+
Sbjct: 208 RLLVVDSIMACFRVDYSGRGELNDRQQKL-NQHLSSL-IRLAEDYNVAVFLTNQVQ 261
>SGD|S000000897 [details] [associations]
symbol:RAD51 "Strand exchange protein" species:4932
"Saccharomyces cerevisiae" [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0000722 "telomere maintenance via
recombination" evidence=IMP] [GO:0045002 "double-strand break
repair via single-strand annealing" evidence=IMP] [GO:0030491
"heteroduplex formation" evidence=IDA] [GO:0000709 "meiotic joint
molecule formation" evidence=IMP] [GO:0000150 "recombinase
activity" evidence=IDA] [GO:0000228 "nuclear chromosome"
evidence=IDA] [GO:0042148 "strand invasion" evidence=IDA]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
SGD:S000000897 GO:GO:0005524 GO:GO:0003684 EMBL:BK006939
GO:GO:0003697 GO:GO:0000724 GO:GO:0000794 EMBL:U18839 GO:GO:0000722
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 GO:GO:0000709 RefSeq:NP_011021.3
GeneID:856831 KEGG:sce:YER095W KO:K04482 EMBL:M88470
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 OrthoDB:EOG41CB4Z GO:GO:0042148 EMBL:X64270
EMBL:D10023 PIR:A44348 RefSeq:NP_011026.3 PDB:1SZP PDB:3LDA
PDBsum:1SZP PDBsum:3LDA ProteinModelPortal:P25454 SMR:P25454
DIP:DIP-195N IntAct:P25454 MINT:MINT-386096 STRING:P25454
PaxDb:P25454 PeptideAtlas:P25454 EnsemblFungi:YER095W GeneID:856837
KEGG:sce:YER100W CYGD:YER095w KO:K04554 EvolutionaryTrace:P25454
NextBio:983130 Genevestigator:P25454 GermOnline:YER095W
GO:GO:0030491 Uniprot:P25454
Length = 400
Score = 116 (45.9 bits), Expect = 0.00034, P = 0.00034
Identities = 49/203 (24%), Positives = 81/203 (39%)
Query: 93 FGSRRGPVI--STGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQ---KL 147
F RR +I +TGS LD LG GG+ G I E++G +GK+ L + Q +
Sbjct: 150 FHMRRSELICLTTGSKNLDTLLG-GGVETGSITELFGEFRTGKSQLCHTLAVTCQIPLDI 208
Query: 148 GG---YCAYLDVENALDP----SLAEAMGIDAE----NLLIAQPDSAENLLSVVDTLTKS 196
GG C Y+D E P S+A+ G+D + N+ A+ +A++ L ++D +
Sbjct: 209 GGGEGKCLYIDTEGTFRPVRLVSIAQRFGLDPDDALNNVAYARAYNADHQLRLLDAAAQM 268
Query: 197 GXXXXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQV 256
++ G S Q + + +R + Q ++ NQV
Sbjct: 269 MSESRFSLIVVDSVMALYRTDFSGRGELSARQMHL-AKFMRALQRLADQFGVAVVVTNQV 327
Query: 257 RFSAKSGQGLGRMDEVTSGGNAL 279
G + GGN +
Sbjct: 328 VAQVDGGMAFNPDPKKPIGGNIM 350
>UNIPROTKB|G5EGG8 [details] [associations]
symbol:rad-51 "RecA/Rad51/Dmc1-like protein" species:6239
"Caenorhabditis elegans" [GO:0006310 "DNA recombination"
evidence=IDA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0035188
GO:GO:0043066 GO:GO:0042771 GO:GO:0003684 GO:GO:0006281
GO:GO:0003690 GO:GO:0000794 GO:GO:0045132 SUPFAM:SSF47794
GO:GO:0008094 GO:GO:0010032 GO:GO:0043073 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150
KO:K04482 GeneTree:ENSGT00550000074609 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838 EMBL:AF061201
EMBL:AB011382 PIR:T37305 RefSeq:NP_001023466.1 UniGene:Cel.19596
ProteinModelPortal:G5EGG8 SMR:G5EGG8 IntAct:G5EGG8
EnsemblMetazoa:Y43C5A.6b GeneID:177914 KEGG:cel:CELE_Y43C5A.6
CTD:177914 WormBase:Y43C5A.6b NextBio:898916 Uniprot:G5EGG8
Length = 357
Score = 114 (45.2 bits), Expect = 0.00047, P = 0.00047
Identities = 34/104 (32%), Positives = 57/104 (54%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTL--ALHVIKEAQ-KLGG---YCAYL 154
I TGS LD LG GG+ G I E+YG +GKT L +L V+ + +GG C Y+
Sbjct: 118 IRTGSASLDRLLG-GGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYI 176
Query: 155 DVENALDP----SLAEAMGIDA----ENLLIAQPDSAENLLSVV 190
D P ++A+ +D+ EN+ +A+ ++E+L++++
Sbjct: 177 DTNATFRPERIIAIAQRYNMDSAHVLENIAVARAYNSEHLMALI 220
>CGD|CAL0001214 [details] [associations]
symbol:RAD51 species:5476 "Candida albicans" [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0030998 "linear
element" evidence=IEA] [GO:0003691 "double-stranded telomeric DNA
binding" evidence=IEA] [GO:0000150 "recombinase activity"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0006311 "meiotic gene conversion" evidence=IEA] [GO:0000722
"telomere maintenance via recombination" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] [GO:0042148 "strand
invasion" evidence=IEA] [GO:0000709 "meiotic joint molecule
formation" evidence=IEA] [GO:0030491 "heteroduplex formation"
evidence=IEA] [GO:0007533 "mating type switching" evidence=IEA]
[GO:0000711 "meiotic DNA repair synthesis" evidence=IEA]
[GO:0006200 "ATP catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 CGD:CAL0001214 GO:GO:0005524
GO:GO:0003684 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0044182
GO:GO:0008094 GO:GO:1900429 GO:GO:0036166 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482 EMBL:AACQ01000127
EMBL:AACQ01000126 PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239
RefSeq:XP_713440.1 RefSeq:XP_713476.1 ProteinModelPortal:Q59UY8
SMR:Q59UY8 STRING:Q59UY8 GeneID:3644908 GeneID:3644944
KEGG:cal:CaO19.11236 KEGG:cal:CaO19.3752 Uniprot:Q59UY8
Length = 361
Score = 114 (45.2 bits), Expect = 0.00048, P = 0.00048
Identities = 49/204 (24%), Positives = 87/204 (42%)
Query: 93 FGSRRGPVI--STGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQ---KL 147
F SRR +I +TGS +LD LG GG+ G I E++G +GK+ L + Q +
Sbjct: 109 FHSRRSELICLTTGSKQLDTLLG-GGVETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDM 167
Query: 148 GG---YCAYLDVENALDP----SLAEAMGIDA----ENLLIAQPDSAENLLSVVDTLTKS 196
GG C Y+D E P S+A+ G++ +N+ A+ +AE+ L++++ +
Sbjct: 168 GGGEGKCLYIDTEGTFRPNRLVSIAQRYGLNPNDCLDNVAYARAYNAEHQLNLLNIAAEM 227
Query: 197 GXXXXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQV 256
++ G S Q+ + + +R + + ++ NQV
Sbjct: 228 MAESRFSLLIVDSIMSLYRTDYAGRGELSARQTHV-AKFMRTLQRLADEFGIAVVITNQV 286
Query: 257 RFSAKSGQGLGRMD-EVTSGGNAL 279
G+ D + GGN +
Sbjct: 287 VAQVDGMSGMFNPDPKKPIGGNII 310
>UNIPROTKB|Q59UY8 [details] [associations]
symbol:RAD51 "Putative uncharacterized protein RAD51"
species:237561 "Candida albicans SC5314" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 CGD:CAL0001214 GO:GO:0005524
GO:GO:0003684 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0044182
GO:GO:0008094 GO:GO:1900429 GO:GO:0036166 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482 EMBL:AACQ01000127
EMBL:AACQ01000126 PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239
RefSeq:XP_713440.1 RefSeq:XP_713476.1 ProteinModelPortal:Q59UY8
SMR:Q59UY8 STRING:Q59UY8 GeneID:3644908 GeneID:3644944
KEGG:cal:CaO19.11236 KEGG:cal:CaO19.3752 Uniprot:Q59UY8
Length = 361
Score = 114 (45.2 bits), Expect = 0.00048, P = 0.00048
Identities = 49/204 (24%), Positives = 87/204 (42%)
Query: 93 FGSRRGPVI--STGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQ---KL 147
F SRR +I +TGS +LD LG GG+ G I E++G +GK+ L + Q +
Sbjct: 109 FHSRRSELICLTTGSKQLDTLLG-GGVETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDM 167
Query: 148 GG---YCAYLDVENALDP----SLAEAMGIDA----ENLLIAQPDSAENLLSVVDTLTKS 196
GG C Y+D E P S+A+ G++ +N+ A+ +AE+ L++++ +
Sbjct: 168 GGGEGKCLYIDTEGTFRPNRLVSIAQRYGLNPNDCLDNVAYARAYNAEHQLNLLNIAAEM 227
Query: 197 GXXXXXXXXXXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQV 256
++ G S Q+ + + +R + + ++ NQV
Sbjct: 228 MAESRFSLLIVDSIMSLYRTDYAGRGELSARQTHV-AKFMRTLQRLADEFGIAVVITNQV 286
Query: 257 RFSAKSGQGLGRMD-EVTSGGNAL 279
G+ D + GGN +
Sbjct: 287 VAQVDGMSGMFNPDPKKPIGGNII 310
>WB|WBGene00004297 [details] [associations]
symbol:rad-51 species:6239 "Caenorhabditis elegans"
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0009432 "SOS
response" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0033554 "cellular
response to stress" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0035188 "hatching" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0042771 "intrinsic apoptotic
signaling pathway in response to DNA damage by p53 class mediator"
evidence=IGI] [GO:0010032 "meiotic chromosome condensation"
evidence=IMP] [GO:0043073 "germ cell nucleus" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0000150 "recombinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA
helicase binding" evidence=IPI] [GO:0003690 "double-stranded DNA
binding" evidence=IDA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0035188
GO:GO:0043066 GO:GO:0042771 GO:GO:0003684 GO:GO:0006281
GO:GO:0003690 GO:GO:0000794 GO:GO:0045132 SUPFAM:SSF47794
GO:GO:0008094 GO:GO:0010032 GO:GO:0043073 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838 UniGene:Cel.19596
GeneID:177914 KEGG:cel:CELE_Y43C5A.6 CTD:177914 NextBio:898916
RefSeq:NP_001023465.1 ProteinModelPortal:Q95Q25 SMR:Q95Q25
DIP:DIP-25225N IntAct:Q95Q25 MINT:MINT-226974 STRING:Q95Q25
EnsemblMetazoa:Y43C5A.6a UCSC:Y43C5A.6b WormBase:Y43C5A.6a
InParanoid:Q95Q25 ArrayExpress:Q95Q25 Uniprot:Q95Q25
Length = 395
Score = 114 (45.2 bits), Expect = 0.00056, P = 0.00056
Identities = 34/104 (32%), Positives = 57/104 (54%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTL--ALHVIKEAQ-KLGG---YCAYL 154
I TGS LD LG GG+ G I E+YG +GKT L +L V+ + +GG C Y+
Sbjct: 156 IRTGSASLDRLLG-GGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYI 214
Query: 155 DVENALDP----SLAEAMGIDA----ENLLIAQPDSAENLLSVV 190
D P ++A+ +D+ EN+ +A+ ++E+L++++
Sbjct: 215 DTNATFRPERIIAIAQRYNMDSAHVLENIAVARAYNSEHLMALI 258
>UNIPROTKB|Q95Q25 [details] [associations]
symbol:rad-51 "Protein RAD-51, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006310 "DNA recombination"
evidence=IDA] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0035188 GO:GO:0043066 GO:GO:0042771
GO:GO:0003684 GO:GO:0006281 GO:GO:0003690 GO:GO:0000794
GO:GO:0045132 SUPFAM:SSF47794 GO:GO:0008094 GO:GO:0010032
GO:GO:0043073 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150
KO:K04482 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838
UniGene:Cel.19596 GeneID:177914 KEGG:cel:CELE_Y43C5A.6 CTD:177914
NextBio:898916 RefSeq:NP_001023465.1 ProteinModelPortal:Q95Q25
SMR:Q95Q25 DIP:DIP-25225N IntAct:Q95Q25 MINT:MINT-226974
STRING:Q95Q25 EnsemblMetazoa:Y43C5A.6a UCSC:Y43C5A.6b
WormBase:Y43C5A.6a InParanoid:Q95Q25 ArrayExpress:Q95Q25
Uniprot:Q95Q25
Length = 395
Score = 114 (45.2 bits), Expect = 0.00056, P = 0.00056
Identities = 34/104 (32%), Positives = 57/104 (54%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTL--ALHVIKEAQ-KLGG---YCAYL 154
I TGS LD LG GG+ G I E+YG +GKT L +L V+ + +GG C Y+
Sbjct: 156 IRTGSASLDRLLG-GGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYI 214
Query: 155 DVENALDP----SLAEAMGIDA----ENLLIAQPDSAENLLSVV 190
D P ++A+ +D+ EN+ +A+ ++E+L++++
Sbjct: 215 DTNATFRPERIIAIAQRYNMDSAHVLENIAVARAYNSEHLMALI 258
>UNIPROTKB|Q6FKF0 [details] [associations]
symbol:CAGL0L12100g "Similar to uniprot|P25453
Saccharomyces cerevisiae YER179w meiosis-specific protein"
species:284593 "Candida glabrata CBS 138" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 EMBL:CR380958
GenomeReviews:CR380958_GR KO:K10872 OMA:FFQDIDL InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
RefSeq:XP_449294.1 ProteinModelPortal:Q6FKF0 GeneID:2890684
KEGG:cgr:CAGL0L12100g Uniprot:Q6FKF0
Length = 334
Score = 112 (44.5 bits), Expect = 0.00070, P = 0.00070
Identities = 45/172 (26%), Positives = 79/172 (45%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQ---KLGG---YCAYL 154
ISTGS +LD LG GG+ I E++G GKT ++ + AQ +GG A++
Sbjct: 96 ISTGSKQLDSVLG-GGIMTMSITEVFGEFRCGKTQMSHTLCVTAQLPKSMGGGEGKVAFI 154
Query: 155 DVENALDPS----LAEAMGIDA----ENLLIAQPDSAENLLSVVDTLTKSGXXXXXXXXX 206
D E P +AE +D EN+ A+ ++E+ + +V+ L +
Sbjct: 155 DTEGTFRPERIKQIAERYDLDPDSCLENITYARALNSEHQMELVEQLGEELSSGSYTLII 214
Query: 207 XXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFL-NQVR 257
++ + G ++ Q ++ Q L K++ L + L +F+ NQV+
Sbjct: 215 VDSIMANFRVDYCGRGELNERQQKL-NQHLFKLN-RLAEEFNLAVFMTNQVQ 264
>POMBASE|SPAC8E11.03c [details] [associations]
symbol:dmc1 "RecA family ATPase Dmc1" species:4896
"Schizosaccharomyces pombe" [GO:0000150 "recombinase activity"
evidence=IDA] [GO:0000709 "meiotic joint molecule formation"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=ISM;IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006311 "meiotic gene conversion" evidence=IMP]
[GO:0007131 "reciprocal meiotic recombination" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IPI] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 PomBase:SPAC8E11.03c
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0006281 GO:GO:0051260 GO:GO:0003690 GO:GO:0003697
GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468
HOGENOM:HOG000227426 KO:K10872 OMA:FFQDIDL InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 EMBL:AB008545 EMBL:D64035
PIR:T39157 PIR:T51302 RefSeq:NP_594166.1 ProteinModelPortal:O42634
DIP:DIP-29236N IntAct:O42634 STRING:O42634
EnsemblFungi:SPAC8E11.03c.1 GeneID:2542106 KEGG:spo:SPAC8E11.03c
OrthoDB:EOG43XZC8 NextBio:20803178 GO:GO:0006311 GO:GO:0000709
Uniprot:O42634
Length = 332
Score = 111 (44.1 bits), Expect = 0.00090, P = 0.00090
Identities = 48/200 (24%), Positives = 85/200 (42%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQ---KLGGY---CAYL 154
ISTGS L+ LG GG+ I E++G GKT ++ + AQ +GG A++
Sbjct: 95 ISTGSEALNGILG-GGIQSMSITEVFGEFRCGKTQMSHTLCVTAQLPRDMGGAEGKVAFI 153
Query: 155 DVENALDP----SLAEAMGIDA----ENLLIAQPDSAENLLSVVDTL-TKSGXXXXXXXX 205
D E P ++AE G+DA EN+++++ ++E + + L T
Sbjct: 154 DTEGTFRPDRIKAIAERFGVDADQAMENIIVSRAYNSEQQMEYITKLGTIFAEDGQYRLL 213
Query: 206 XXXXLIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFL-NQVRFSAKSGQ 264
++ + G S+ Q ++ R H S + + +F+ NQV+ +
Sbjct: 214 IVDSIMALFRVDYSGRGELSERQQKLNIMLARLNHIS--EEFNVAVFVTNQVQADPGAAM 271
Query: 265 GLGRMDEVTSGGNALKFYAA 284
D GG+ + +A
Sbjct: 272 MFASNDRKPVGGHVMAHASA 291
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.380 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 315 281 0.00083 115 3 11 22 0.50 33
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 40
No. of states in DFA: 574 (61 KB)
Total size of DFA: 165 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.46u 0.09s 21.55t Elapsed: 00:00:01
Total cpu time: 21.47u 0.09s 21.56t Elapsed: 00:00:01
Start: Sat May 11 08:30:33 2013 End: Sat May 11 08:30:34 2013