BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021239
(315 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359496049|ref|XP_002278976.2| PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like
[Vitis vinifera]
gi|296087050|emb|CBI33377.3| unnamed protein product [Vitis vinifera]
Length = 398
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/281 (72%), Positives = 237/281 (84%), Gaps = 1/281 (0%)
Query: 27 QNGRRDAITCIGMNIHSLSSAAEVPEFD-DEPHDDAKIMQKDNALRLALSQLANDFGKES 85
Q G+RDA+ CIGM+ SLSS+ E E + DE +D K +KD ALRLA+S+LA DFG+ES
Sbjct: 29 QTGKRDAVACIGMHTRSLSSSVEFLEIECDEYGNDVKAAEKDTALRLAISRLAGDFGRES 88
Query: 86 MLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQ 145
MLSL+RFF SR PVISTGSLKLDLALGIGGLPKGRIVEIYG+EASGKTTLALH+IKEAQ
Sbjct: 89 MLSLQRFFVSRHAPVISTGSLKLDLALGIGGLPKGRIVEIYGQEASGKTTLALHIIKEAQ 148
Query: 146 KLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVD 205
KLGGYCAYLDVENA++PS AE+MG++ +NLLI+ PDSAENLLS+V+TLTKSGS+DVIVVD
Sbjct: 149 KLGGYCAYLDVENAMNPSFAESMGVNVDNLLISPPDSAENLLSMVNTLTKSGSMDVIVVD 208
Query: 206 SVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQG 265
SVAAL+P+ E+ V I G Y D QS+IM QALRKIHYSLC+S TLIIF+NQVR S KS G
Sbjct: 209 SVAALVPQHELDVVIGGTYQDVQSQIMAQALRKIHYSLCRSETLIIFVNQVRSSLKSSHG 268
Query: 266 LGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNILEV 306
GR+DEVT GGNAL+FYAA+RLR+MRT L + DKV L V
Sbjct: 269 FGRLDEVTCGGNALRFYAAVRLRVMRTGLLRTEDKVTGLGV 309
>gi|356571990|ref|XP_003554153.1| PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like
[Glycine max]
Length = 386
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/286 (69%), Positives = 229/286 (80%), Gaps = 7/286 (2%)
Query: 21 LFPSFSQNGRRDAITCIGMNIHSLSSAAEVPEFD-DEPHDDAKIMQKDNALRLALSQLAN 79
L F QNG R ++ IGM SLSSAAE +F+ D HDD K +KDNAL LA+SQLA+
Sbjct: 14 LLSPFCQNGGRQIMSRIGMTACSLSSAAEASDFECDAIHDDVKAAEKDNALCLAVSQLAS 73
Query: 80 DFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALH 139
+F KESMLSL++ FG RR VISTGSLKLDLALGIGGLPKGRIVEIYGREA+GKTTLA+
Sbjct: 74 EFSKESMLSLQKIFGVRRAHVISTGSLKLDLALGIGGLPKGRIVEIYGREAAGKTTLAIQ 133
Query: 140 VIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSI 199
+IKEAQKLGGYCAYLDVENALD SL E+MGID ENLLI+ PD AENLLS+VDTLTKSG++
Sbjct: 134 IIKEAQKLGGYCAYLDVENALDFSLMESMGIDTENLLISHPDCAENLLSMVDTLTKSGAV 193
Query: 200 DVIVVDSVAALIPKCE---IGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQV 256
DVIV+DSVAAL+PKCE +GV N D QSR+MTQALRKIHYSL S TLI+F+NQ+
Sbjct: 194 DVIVIDSVAALVPKCELDQLGVTTN---RDLQSRMMTQALRKIHYSLSHSQTLIVFINQI 250
Query: 257 RFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
R S KS + G ++EVT GGNAL+FYAA+RLR+ R RL K DKV
Sbjct: 251 RLSPKSAKEYGSVEEVTCGGNALRFYAAVRLRLSRVRLIKTEDKVE 296
>gi|357509615|ref|XP_003625096.1| RecA [Medicago truncatula]
gi|355500111|gb|AES81314.1| RecA [Medicago truncatula]
Length = 394
Score = 366 bits (940), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 191/291 (65%), Positives = 230/291 (79%), Gaps = 5/291 (1%)
Query: 21 LFPSFSQNGRRDAITCIGMNIHSLSSAAEVPEFD-DEPHDDAKIMQKDNALRLALSQLAN 79
L+PS +NG R+ +T IG+N SLS+ AE + + DE HDD K +K+NAL LA+SQLA+
Sbjct: 20 LYPS-RKNGFREIMTRIGVNTCSLSTTAEASDLECDEIHDDVKAAEKNNALCLAVSQLAS 78
Query: 80 DFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALH 139
+F KESMLSL++FF R V+STGSLKLD+ALGIGGLPKGRIVEIYGREA+GKTTLAL
Sbjct: 79 EFSKESMLSLQKFFRVRYANVVSTGSLKLDIALGIGGLPKGRIVEIYGREAAGKTTLALQ 138
Query: 140 VIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSI 199
+IKEAQKLGGYCAYLDVE+ALD SL E+MG++ +NLLI+ PD AENLLS+VDTLTKSG++
Sbjct: 139 IIKEAQKLGGYCAYLDVESALDLSLVESMGVNTKNLLISNPDCAENLLSMVDTLTKSGAV 198
Query: 200 DVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQ---V 256
DVIVVDSVAAL+PKCE+ D SRIMTQALRKIHYSL +S TL+IF+NQ V
Sbjct: 199 DVIVVDSVAALVPKCELDQLGVATSQDLHSRIMTQALRKIHYSLSRSQTLLIFVNQVKIV 258
Query: 257 RFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNILEVV 307
RFS K+ G G M+EVT GGNAL+FYAA+RLR+ R L K DKV + V
Sbjct: 259 RFSPKAFGGRGPMEEVTCGGNALRFYAAVRLRLSRMGLIKTEDKVEGITVC 309
>gi|224139890|ref|XP_002323326.1| predicted protein [Populus trichocarpa]
gi|222867956|gb|EEF05087.1| predicted protein [Populus trichocarpa]
Length = 323
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 187/243 (76%), Positives = 211/243 (86%), Gaps = 4/243 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
QKDNALRLAL+QLA +FG+ESMLSL+RFF SRR PVISTGSLKLDLALGIGGLPKGR+VE
Sbjct: 1 QKDNALRLALTQLAGEFGRESMLSLQRFFNSRRAPVISTGSLKLDLALGIGGLPKGRMVE 60
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG+EASGKTTLALH+IKEAQKLGGYCAYLDVENA+DP L E+MGI+ ENLLI+ PD AE
Sbjct: 61 IYGKEASGKTTLALHIIKEAQKLGGYCAYLDVENAMDPLLPESMGINTENLLISHPDCAE 120
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
NLLSVVDTLTKSGS+DVIVVDSVAAL+P+ EI + G + D QSR+MTQALRKI+YSLC
Sbjct: 121 NLLSVVDTLTKSGSVDVIVVDSVAALVPQREIDTAVGGTFEDIQSRLMTQALRKINYSLC 180
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNIL 304
QS TLIIFLNQVR S KS GR +EVT GGNALKFY+A+RLRM+RTRL K D++ L
Sbjct: 181 QSQTLIIFLNQVRKSLKS----GRAEEVTCGGNALKFYSAVRLRMIRTRLLKTEDRITGL 236
Query: 305 EVV 307
V
Sbjct: 237 GVC 239
>gi|255586516|ref|XP_002533897.1| DNA repair protein reca, putative [Ricinus communis]
gi|223526148|gb|EEF28487.1| DNA repair protein reca, putative [Ricinus communis]
Length = 388
Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 198/308 (64%), Positives = 235/308 (76%), Gaps = 7/308 (2%)
Query: 1 MVQLLQPFRFSSIAPRRFFS-LFPSFSQNGRRDAITCIGMNIHSLSSAAEVPEFD-DEPH 58
M L R S+ R S FPS SQN R +AIT +G L S +F+ D+
Sbjct: 1 MAPFLHSLRLHSLPRFRLCSSFFPSLSQNMRNEAITSLGRGPRLLCSL----DFECDKLI 56
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
DD++ M+K N L LAL +++ +F +ESMLSL RFF SR+ VISTGSLKLDLALGIGGLP
Sbjct: 57 DDSEAMEKHNKLFLALKEISGEFCRESMLSLHRFFSSRQASVISTGSLKLDLALGIGGLP 116
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGR+VEIYG+EASGKTTLALH+IKEAQK GGYCAYLD ENALDPSL E+MG++ ENLLI+
Sbjct: 117 KGRMVEIYGQEASGKTTLALHIIKEAQKCGGYCAYLDAENALDPSLVESMGVNTENLLIS 176
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
PDSAENLLSVVDTLTKSGS+DVIVVDSVAAL+P+ E+ + G D QSRIM+QA+RK
Sbjct: 177 PPDSAENLLSVVDTLTKSGSVDVIVVDSVAALVPQLELDTML-GSTEDRQSRIMSQAVRK 235
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
I+YSL QS TLIIFLNQVR + KSGQGLG++DE T GGNALKFY+A+RLRM R L K
Sbjct: 236 INYSLSQSKTLIIFLNQVRANVKSGQGLGQVDEATCGGNALKFYSAVRLRMARKALLKTE 295
Query: 299 DKVNILEV 306
D++ L V
Sbjct: 296 DEITGLRV 303
>gi|22330951|ref|NP_187625.2| DNA repair protein recA-like 2 [Arabidopsis thaliana]
gi|75158993|sp|Q8RY99.1|RECAM_ARATH RecName: Full=DNA repair protein recA homolog 2, mitochondrial;
AltName: Full=Recombinase A homolog 2; Flags: Precursor
gi|18996122|gb|AAL79768.1| RecA protein [Arabidopsis thaliana]
gi|22531124|gb|AAM97066.1| putative RecA protein [Arabidopsis thaliana]
gi|23198012|gb|AAN15533.1| putative RecA protein [Arabidopsis thaliana]
gi|332641343|gb|AEE74864.1| DNA repair protein recA-like 2 [Arabidopsis thaliana]
Length = 389
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 186/300 (62%), Positives = 226/300 (75%), Gaps = 2/300 (0%)
Query: 9 RFSSIAPRRFFSLFPSFSQ-NGRRDAITCIGMNIHSLSSAAEVPEFD-DEPHDDAKIMQK 66
R S +P + F F SQ NGRR + C G LSS E + + DE DD K+ +K
Sbjct: 3 RLSWASPIQRFRFFSYLSQLNGRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEK 62
Query: 67 DNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIY 126
D AL LALSQL+ DF K+S LSL+RF+ RR VISTGSL LDLALG+GGLPKGR+VE+Y
Sbjct: 63 DTALHLALSQLSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVY 122
Query: 127 GREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENL 186
G+EASGKTTLALH+IKEAQKLGGYCAYLD ENA+DPSLAE++G++ E LLI++P SAE +
Sbjct: 123 GKEASGKTTLALHIIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKM 182
Query: 187 LSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQS 246
L++VD LTKSGS+DVIVVDSVAAL P+CE+ P+ Y D QSRIMTQALRKIHYS+ S
Sbjct: 183 LNIVDVLTKSGSVDVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYS 242
Query: 247 HTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNILEV 306
TLI+FLNQVR KS +EVT GGNAL F+AA+RL+M+RT L K A+K++ L V
Sbjct: 243 QTLIVFLNQVRSHVKSNMHFPHAEEVTCGGNALPFHAAIRLKMIRTGLIKTANKISGLNV 302
>gi|6143863|gb|AAF04410.1|AC010927_3 putative RecA protein [Arabidopsis thaliana]
Length = 389
Score = 347 bits (890), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 187/300 (62%), Positives = 225/300 (75%), Gaps = 2/300 (0%)
Query: 9 RFSSIAPRRFFSLFPSFSQ-NGRRDAITCIGMNIHSLSSAAEVPEFD-DEPHDDAKIMQK 66
R S +P + F F SQ NGRR + C G LSS E + + DE DD K+ +K
Sbjct: 3 RLSWASPIQRFRFFSYLSQLNGRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEK 62
Query: 67 DNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIY 126
D AL LALSQL+ DF K+S LSL+RF+ RR VISTGSL LDLALG+GGLPKGR+VE+Y
Sbjct: 63 DTALHLALSQLSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVY 122
Query: 127 GREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENL 186
G+EASGKTTLALH+IKEAQKLGGYCAYLD ENA+DPSLAE++G++ E LLI++P SAE +
Sbjct: 123 GKEASGKTTLALHIIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKM 182
Query: 187 LSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQS 246
L++VD LTKSGS+DVIVVDSVAAL P+CE+ P+ Y D QSRIMTQALRKIHYS+ S
Sbjct: 183 LNIVDVLTKSGSVDVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYS 242
Query: 247 HTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNILEV 306
TLI+FLNQVR KS +EVT GGNAL F+AA+RL+M+RT L K A+KV L V
Sbjct: 243 QTLIVFLNQVRSHVKSNMHFPHAEEVTCGGNALPFHAAIRLKMIRTGLIKTANKVYGLNV 302
>gi|133711814|gb|ABO36632.1| putative recA protein [Solanum lycopersicum]
Length = 395
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 189/304 (62%), Positives = 227/304 (74%), Gaps = 6/304 (1%)
Query: 4 LLQPFRFSSIAPRRFFSLFPSFSQNGRRDAITCIGMNIHSLSSAAEVPEFDDEPHDDAKI 63
+LQ RF S + R S+FP S + ++ ++ S+ E+ DE DD K
Sbjct: 2 VLQFLRFIS-SSSRCLSVFPLSSFKPENGMVWRRMLSAYASSAEGEL----DEIQDDTKT 56
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+K +AL ALSQL DF KES LSL+RFFG+RR PVI TGSL+LDLALG+GGLPKGRIV
Sbjct: 57 SEKASALHSALSQLEGDFCKESRLSLQRFFGARRTPVIPTGSLRLDLALGLGGLPKGRIV 116
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG+EASGKTTLALHVI+EAQKLGGYCAYLDVEN ++PSLAEA+G++ ENLLI+QPDSA
Sbjct: 117 EIYGQEASGKTTLALHVIREAQKLGGYCAYLDVENGMNPSLAEAIGVNVENLLISQPDSA 176
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
ENLLS+V+TLTKSGS+DVIVVDSVAAL+P+ EI + QS+IMTQALRKIHYSL
Sbjct: 177 ENLLSIVNTLTKSGSMDVIVVDSVAALVPQLEIDATLCDSPKGLQSKIMTQALRKIHYSL 236
Query: 244 CQSHTLIIFLNQVRFSAKS-GQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
S TLIIF+NQVR S K +G G MDEVT GGNAL FYAA+RLR +R +L K K+
Sbjct: 237 GNSSTLIIFINQVRRSNKGLVRGSGCMDEVTCGGNALPFYAAIRLRTIRKQLLKTRHKIT 296
Query: 303 ILEV 306
L +
Sbjct: 297 GLRI 300
>gi|449449809|ref|XP_004142657.1| PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like
[Cucumis sativus]
Length = 401
Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 180/300 (60%), Positives = 223/300 (74%), Gaps = 3/300 (1%)
Query: 4 LLQPFRFSSIAPRRFFSLFPSFSQNGRRDAITCIGMNIHSLSSAAEVPEFD-DEPHDDAK 62
L + R P RF SL S Q GRRD I+ +G++ SS +V E++ D +DD K
Sbjct: 9 LFRFCRLKHFEPSRFSSLSHSLLQ-GRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTK 67
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+KD AL A+SQ+A DFGK+S L L+RF SR PVISTGSLKLD+ALGIGGLPKGRI
Sbjct: 68 TTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIGGLPKGRI 127
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG+EASGKTTLALH+IKEAQKLGGYCAY D ENA+D S AE+MG++ +NLLI+ P S
Sbjct: 128 IEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLISPPAS 187
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
AENLL V+TL +SGS+DV+VVD+VAAL+P+CE+ PI D++ R+M QALRKIHYS
Sbjct: 188 AENLLCAVNTLVRSGSVDVVVVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRKIHYS 247
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
L S TL++F+NQVR SA G + DEVT GGNAL+FYAA+RLR++R L K DKV
Sbjct: 248 LKLSQTLVVFINQVR-SAGYQNGFEQKDEVTCGGNALQFYAAVRLRLLRKGLLKSGDKVT 306
>gi|226495001|ref|NP_001143776.1| uncharacterized protein LOC100276540 [Zea mays]
gi|194699132|gb|ACF83650.1| unknown [Zea mays]
gi|195626822|gb|ACG35241.1| hypothetical protein [Zea mays]
gi|414878734|tpg|DAA55865.1| TPA: putative recA DNA recombination family protein [Zea mays]
Length = 409
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 160/271 (59%), Positives = 203/271 (74%), Gaps = 6/271 (2%)
Query: 27 QNGRRDAITCIGMNIHSLSSAAEVPEFD---DEPHDDAKIMQKDNALRLALSQLANDFGK 83
QNG+RD + S+S+ ++ + D D P DD K ++K+++L +A+SQLA DF +
Sbjct: 41 QNGKRDTFCSLWFKGRSVSTTVDM-QLDYESDPPLDDTKAIEKESSLNVAVSQLAIDFDR 99
Query: 84 ESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKE 143
+S L L+RF +R+ V+STGSLKLDLALG+GGLPKGR+VEIYG+EASGKTTLALHVIKE
Sbjct: 100 DSNLCLERFSRARKASVVSTGSLKLDLALGVGGLPKGRMVEIYGKEASGKTTLALHVIKE 159
Query: 144 AQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIV 203
AQK GGYCAY+D ENA +PS AE++G+D+E LLIAQPDSAEN LS+V+TL S+ V+V
Sbjct: 160 AQKNGGYCAYIDAENAFNPSFAESIGVDSERLLIAQPDSAENSLSIVNTLVGG-SVAVVV 218
Query: 204 VDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSG 263
VDSVAALIPKCEI I D QS +MT+ALRKI Y+LC+S TLIIF+NQVR + ++
Sbjct: 219 VDSVAALIPKCEIEGEIYTNCGDIQSHLMTRALRKIQYTLCRSETLIIFVNQVR-TKRTS 277
Query: 264 QGLGRMDEVTSGGNALKFYAALRLRMMRTRL 294
G EV GGNAL FYAA+R+R R L
Sbjct: 278 SNPGIYKEVPCGGNALGFYAAVRMRTSRREL 308
>gi|357131163|ref|XP_003567210.1| PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like
[Brachypodium distachyon]
Length = 356
Score = 286 bits (732), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 159/248 (64%), Positives = 191/248 (77%), Gaps = 1/248 (0%)
Query: 55 DEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGI 114
D P DDAK ++K++ L +A+SQLA+DF +ES L L+RF +RR VI TGSLKLDLALGI
Sbjct: 18 DPPIDDAKSLEKESTLNVAVSQLASDFDRESNLCLERFSRTRRASVIPTGSLKLDLALGI 77
Query: 115 GGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAEN 174
GGLPKGR+VEI+G+E+SGKTTLALHVIKEAQK GG CAY+D ENA DPS AEA+G+D E
Sbjct: 78 GGLPKGRMVEIFGKESSGKTTLALHVIKEAQKSGGCCAYIDAENAFDPSFAEAIGVDTEK 137
Query: 175 LLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQ 234
LLIAQPDSAEN LS+V+TL GSIDV+VVDSVAALIPKCE+ I+ Y + QSR+MT+
Sbjct: 138 LLIAQPDSAENSLSIVNTLV-GGSIDVVVVDSVAALIPKCELEGEIHTNYGETQSRLMTR 196
Query: 235 ALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRL 294
ALRKI Y+L +S TLIIF+NQVR S + G EV GGNAL FYAA+R+R R L
Sbjct: 197 ALRKIQYTLSRSETLIIFVNQVRTRRSSKEISGLYKEVACGGNALGFYAAIRVRTSRKEL 256
Query: 295 FKIADKVN 302
D+
Sbjct: 257 RYTDDQAT 264
>gi|242059871|ref|XP_002459081.1| hypothetical protein SORBIDRAFT_03g045520 [Sorghum bicolor]
gi|241931056|gb|EES04201.1| hypothetical protein SORBIDRAFT_03g045520 [Sorghum bicolor]
Length = 760
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/262 (61%), Positives = 199/262 (75%), Gaps = 5/262 (1%)
Query: 36 CIGMNIHSLSSAAEVPEFD---DEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRF 92
C G+NI S+ SA + D D P D AK ++K+++L +A+SQLA+DF +ES L L+RF
Sbjct: 52 CNGLNI-SVQSANLDMQLDYESDPPLDGAKAIEKESSLNIAVSQLASDFDRESNLCLERF 110
Query: 93 FGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCA 152
+R+ V+STGSLKLDLALG+GGLPKGR+VEIYG+EASGKTTLALHV+KEAQK GGYCA
Sbjct: 111 SRTRKASVVSTGSLKLDLALGVGGLPKGRMVEIYGKEASGKTTLALHVVKEAQKNGGYCA 170
Query: 153 YLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIP 212
Y+D ENA +PS AEA+G+D+E LLIAQPDSAEN LS+V++L S+ V+VVDSVAALIP
Sbjct: 171 YIDAENAFNPSFAEAIGVDSERLLIAQPDSAENSLSIVNSLVGG-SVAVVVVDSVAALIP 229
Query: 213 KCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEV 272
KCEI I D QSR+MT+ALRKI Y+LC+S TLIIF+NQVR S G EV
Sbjct: 230 KCEIEGEIYTNSEDIQSRLMTRALRKIQYTLCRSETLIIFVNQVRTKRTSKNFPGIYKEV 289
Query: 273 TSGGNALKFYAALRLRMMRTRL 294
GGNAL FY+A+R+R R L
Sbjct: 290 PCGGNALGFYSAVRMRTSRREL 311
>gi|218189711|gb|EEC72138.1| hypothetical protein OsI_05156 [Oryza sativa Indica Group]
Length = 410
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 164/284 (57%), Positives = 206/284 (72%), Gaps = 10/284 (3%)
Query: 14 APRRFFSLFPSFSQNGRRDAITCIGMNIHSLSSAAEVPEFD---DEPHDDAKIMQKDNAL 70
+P R F L QN D S+S++ +V + D D P D K+++K++ L
Sbjct: 34 SPLRRFPL-----QNWINDRFCWFLSKSCSMSTSVDV-QLDYETDPPLDGVKVLEKESTL 87
Query: 71 RLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREA 130
+A+SQLA+DF +ES L L+RF +RR PVISTGSLKLD+ALGIGGLPKGR+VE++G+EA
Sbjct: 88 SVAVSQLASDFDRESNLCLERFSRTRRTPVISTGSLKLDIALGIGGLPKGRMVELFGKEA 147
Query: 131 SGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVV 190
SGKTTLALHV+KEAQK GG CAY+D ENA +PS+AEA+G++ E LLIAQPDSAEN LS+V
Sbjct: 148 SGKTTLALHVVKEAQKKGGCCAYIDAENAFNPSVAEAIGVNVEKLLIAQPDSAENSLSIV 207
Query: 191 DTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLI 250
+TL GSIDV+VVDSVAALIP+CE+ I D QSR+MT+ALRKI ++L +S TLI
Sbjct: 208 NTLV-GGSIDVVVVDSVAALIPRCELEGEIYMNSEDVQSRLMTRALRKIQHTLSRSETLI 266
Query: 251 IFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRL 294
IF+NQVR S Q G EV GGNAL FYAA+R+R R L
Sbjct: 267 IFVNQVRTKLSSNQTPGIFKEVACGGNALGFYAAVRMRTSRREL 310
>gi|357131683|ref|XP_003567464.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein recA homolog 2,
mitochondrial-like [Brachypodium distachyon]
Length = 346
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 152/246 (61%), Positives = 185/246 (75%), Gaps = 1/246 (0%)
Query: 57 PHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGG 116
P DD K + K++ L +A+SQLA DF +ES L L+RF +RR VI TGSLKLDLALGIGG
Sbjct: 10 PLDDTKSLAKESTLNVAVSQLAGDFDRESNLCLERFSRTRRASVIPTGSLKLDLALGIGG 69
Query: 117 LPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLL 176
LPKG++VEI+G+E+SGKTTLALHV+KEAQK GGYC Y+D ENA DPS AEA+G+D E LL
Sbjct: 70 LPKGKMVEIFGKESSGKTTLALHVVKEAQKSGGYCTYIDAENAFDPSSAEAIGVDTEKLL 129
Query: 177 IAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQAL 236
IAQPDSAEN LS+V+TL GSIDV+VVDSVA LIPKCE+ ++ Y + QSR+MT+AL
Sbjct: 130 IAQPDSAENSLSIVNTLV-GGSIDVVVVDSVAGLIPKCELEGEMHTNYGETQSRLMTRAL 188
Query: 237 RKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
RK Y+L +S TLIIF+NQVR S + G EV GGNAL FYAA+R+R R L
Sbjct: 189 RKXQYTLSRSETLIIFVNQVRTRRSSKEFSGLYKEVACGGNALGFYAAIRVRTSRKELRY 248
Query: 297 IADKVN 302
D+
Sbjct: 249 TDDQAT 254
>gi|222619856|gb|EEE55988.1| hypothetical protein OsJ_04733 [Oryza sativa Japonica Group]
Length = 392
Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 153/240 (63%), Positives = 189/240 (78%), Gaps = 1/240 (0%)
Query: 55 DEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGI 114
D P D K+++K++ L +A+SQLA+DF +ES L L+RF +RR PVISTGSLKLD+ALGI
Sbjct: 54 DPPLDGVKVLEKESTLSVAVSQLASDFDRESNLCLERFSRTRRTPVISTGSLKLDIALGI 113
Query: 115 GGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAEN 174
GGLPKGR+VE++G+EASGKTTLALHV+KEAQK GG CAY+D ENA +PS+AEA+G++ E
Sbjct: 114 GGLPKGRMVELFGKEASGKTTLALHVVKEAQKKGGCCAYIDAENAFNPSVAEAIGVNVEK 173
Query: 175 LLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQ 234
LLIAQPDSAEN LS+V+TL GSIDV+VVDSVAALIP+CE+ I D QSR+MT+
Sbjct: 174 LLIAQPDSAENSLSIVNTLV-GGSIDVVVVDSVAALIPRCELEGEIYMNSEDVQSRLMTR 232
Query: 235 ALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRL 294
ALRKI ++L +S TLIIF+NQVR S Q G EV GGNAL FYAA+R+R R L
Sbjct: 233 ALRKIQHTLSRSETLIIFVNQVRTKLSSNQTPGIFKEVACGGNALGFYAAVRMRTSRREL 292
>gi|414878735|tpg|DAA55866.1| TPA: putative recA DNA recombination family protein isoform 1 [Zea
mays]
gi|414878736|tpg|DAA55867.1| TPA: putative recA DNA recombination family protein isoform 2 [Zea
mays]
Length = 346
Score = 279 bits (714), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 152/240 (63%), Positives = 188/240 (78%), Gaps = 2/240 (0%)
Query: 55 DEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGI 114
D P DD K ++K+++L +A+SQLA DF ++S L L+RF +R+ V+STGSLKLDLALG+
Sbjct: 8 DPPLDDTKAIEKESSLNVAVSQLAIDFDRDSNLCLERFSRARKASVVSTGSLKLDLALGV 67
Query: 115 GGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAEN 174
GGLPKGR+VEIYG+EASGKTTLALHVIKEAQK GGYCAY+D ENA +PS AE++G+D+E
Sbjct: 68 GGLPKGRMVEIYGKEASGKTTLALHVIKEAQKNGGYCAYIDAENAFNPSFAESIGVDSER 127
Query: 175 LLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQ 234
LLIAQPDSAEN LS+V+TL S+ V+VVDSVAALIPKCEI I D QS +MT+
Sbjct: 128 LLIAQPDSAENSLSIVNTLVGG-SVAVVVVDSVAALIPKCEIEGEIYTNCGDIQSHLMTR 186
Query: 235 ALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRL 294
ALRKI Y+LC+S TLIIF+NQVR + ++ G EV GGNAL FYAA+R+R R L
Sbjct: 187 ALRKIQYTLCRSETLIIFVNQVR-TKRTSSNPGIYKEVPCGGNALGFYAAVRMRTSRREL 245
>gi|148910572|gb|ABR18358.1| unknown [Picea sitchensis]
Length = 454
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 146/246 (59%), Positives = 183/246 (74%)
Query: 56 EPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIG 115
E D K+ +K+ AL+ ALSQ+ + FGKE+++ L RF G R PVISTGSL LD+ALGIG
Sbjct: 85 EASGDDKLSEKEAALQAALSQIGSTFGKETVMWLGRFLGRRNVPVISTGSLNLDVALGIG 144
Query: 116 GLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENL 175
G PKGR+VEIYG EASGKTTL LH I EAQ+ GGYC ++D E+ALDPSLAEA+G+ ENL
Sbjct: 145 GFPKGRMVEIYGPEASGKTTLGLHTIAEAQRNGGYCVFIDAEHALDPSLAEAIGVKTENL 204
Query: 176 LIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQA 235
L+AQPD E LS+VDT +SGS+DVIVVDSVAAL+PK E+ + + Q+R+M+QA
Sbjct: 205 LLAQPDCGEQALSLVDTFIRSGSVDVIVVDSVAALVPKSELEGEMGDAHMAVQARLMSQA 264
Query: 236 LRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLF 295
LRK+ SL +S TL+IF+NQVR S G G EVT+GGNALKFYA++RL + RT L
Sbjct: 265 LRKLTPSLSRSQTLLIFINQVRSKLSSFGGFGGPSEVTAGGNALKFYASIRLNIRRTGLL 324
Query: 296 KIADKV 301
K D+
Sbjct: 325 KRGDET 330
>gi|224086956|ref|XP_002308017.1| predicted protein [Populus trichocarpa]
gi|222853993|gb|EEE91540.1| predicted protein [Populus trichocarpa]
Length = 335
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/190 (70%), Positives = 161/190 (84%), Gaps = 6/190 (3%)
Query: 9 RFSSIAPRRFFSLFPSFSQNGRRDAITCIGMNIHSLSSAAEVPEFD-DEPHDDAKIMQKD 67
RF+S+A R +L QNGRR A++ IG N H+LSS V +F+ DE HD+ + QKD
Sbjct: 6 RFNSLARFRLCTLSQ---QNGRRHAVSFIGRNDHTLSSV--VSDFEPDELHDEGEAKQKD 60
Query: 68 NALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYG 127
NALRLAL+QLA +FG+ESMLSL+RFF SRR +ISTGSLKLDLALGIGGLPKGR+VEIYG
Sbjct: 61 NALRLALTQLAGEFGRESMLSLQRFFSSRRASIISTGSLKLDLALGIGGLPKGRMVEIYG 120
Query: 128 REASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLL 187
+EASGKTT+ALH+IKEAQKLGGYCA+LDVENA+D SLA++MG++ ENLLI++PD AENLL
Sbjct: 121 QEASGKTTIALHIIKEAQKLGGYCAFLDVENAMDHSLAKSMGVNTENLLISRPDCAENLL 180
Query: 188 SVVDTLTKSG 197
SVV+TLTKSG
Sbjct: 181 SVVNTLTKSG 190
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 31/41 (75%)
Query: 267 GRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNILEVV 307
GR +EVT GGNALKFY+A+RLRM+RT L K DKV L V
Sbjct: 207 GRAEEVTCGGNALKFYSAVRLRMIRTGLLKTGDKVTGLGVC 247
>gi|357449857|ref|XP_003595205.1| RecA [Medicago truncatula]
gi|355484253|gb|AES65456.1| RecA [Medicago truncatula]
Length = 424
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 133/248 (53%), Positives = 177/248 (71%)
Query: 54 DDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALG 113
D + + +KD AL+ A+ Q+ + FGK S++ L R + PV+STGS LD+ALG
Sbjct: 51 DGSDSGEENMSKKDLALQQAMDQITSTFGKGSIMWLGRTVSPKNVPVVSTGSFALDIALG 110
Query: 114 IGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAE 173
I GLPKGR+VEI+G EASGKTTLALHVI EAQK GGYCA++D E+ALD SLAE++G++ E
Sbjct: 111 IFGLPKGRVVEIFGPEASGKTTLALHVIAEAQKQGGYCAFIDAEHALDKSLAESIGVNTE 170
Query: 174 NLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMT 233
NLL++QPD E LS+VDTL +SGSIDVIVVDSVAAL+PK E+ + + Q+R+M+
Sbjct: 171 NLLLSQPDCGEQALSLVDTLIRSGSIDVIVVDSVAALVPKGELDGEMGDAHMAMQARLMS 230
Query: 234 QALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTR 293
QALRK+ +SL S ++IF+NQVR + G G EVT GGNALKFY+++RL + R
Sbjct: 231 QALRKLCHSLSLSQCILIFINQVRSKISTFGGFGGPTEVTCGGNALKFYSSVRLNIKRVG 290
Query: 294 LFKIADKV 301
K ++
Sbjct: 291 FVKKGEET 298
>gi|356558365|ref|XP_003547477.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Glycine max]
Length = 423
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/248 (52%), Positives = 178/248 (71%)
Query: 54 DDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALG 113
D + + +KD AL+ A+ Q+ + +GK S++ L R + PV+STGS LD+ALG
Sbjct: 44 DGSDSGEENMSKKDMALQQAIDQITSAYGKGSIMWLGRSMAPKNVPVVSTGSFALDIALG 103
Query: 114 IGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAE 173
+GGLPKGR+VEI+G EASGKTTLALH+I EAQKLGGYCA++D E+ALD +LAE++G+D +
Sbjct: 104 VGGLPKGRVVEIFGPEASGKTTLALHMIAEAQKLGGYCAFVDAEHALDKTLAESIGVDTK 163
Query: 174 NLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMT 233
NLL++QPD E LS+VDTL +SGS+D IVVDSVAAL+PK E+ + + Q+R+M+
Sbjct: 164 NLLLSQPDCGEQALSLVDTLIRSGSVDAIVVDSVAALVPKGELDGEMGDAHMAMQARLMS 223
Query: 234 QALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTR 293
QALRK+ +SL S +++F+NQVR + G G EVT GGNALKFYA++RL + R
Sbjct: 224 QALRKLCHSLSLSQCILVFINQVRSKISTFGGYGGPTEVTCGGNALKFYASVRLNIKRIG 283
Query: 294 LFKIADKV 301
K ++
Sbjct: 284 FVKKGEET 291
>gi|356532732|ref|XP_003534925.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Glycine max]
Length = 432
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 132/262 (50%), Positives = 182/262 (69%)
Query: 40 NIHSLSSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGP 99
+ S S+ + D + + +KD AL+ A+ Q+ + +GK S++ L R + P
Sbjct: 37 QVLSFSTRKRRSKSDGSDSGEENLSKKDLALQQAIDQITSAYGKGSIMWLGRSVAPKNVP 96
Query: 100 VISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENA 159
V+STGS LD+ALG+GGLPKGR+VEI+G EASGKTTLALHVI EAQK GGYCA++D E+A
Sbjct: 97 VVSTGSFALDIALGVGGLPKGRVVEIFGPEASGKTTLALHVIAEAQKQGGYCAFVDAEHA 156
Query: 160 LDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVP 219
LD +LAE++G+D +NLL++QPD E LS+VDTL +SGS+D IVVDSVAAL+PK E+
Sbjct: 157 LDKTLAESIGVDTKNLLLSQPDCGEQALSLVDTLIRSGSVDAIVVDSVAALVPKGELDGE 216
Query: 220 INGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNAL 279
+ + Q+R+M+QALRK+ +SL S ++IF+NQVR + G G EVT GGNAL
Sbjct: 217 MGDAHMAMQARLMSQALRKLCHSLSLSQCILIFINQVRSKISTFGGYGGPTEVTCGGNAL 276
Query: 280 KFYAALRLRMMRTRLFKIADKV 301
KFYA++RL + R K ++
Sbjct: 277 KFYASVRLNIKRIGFVKKGEET 298
>gi|125534156|gb|EAY80704.1| hypothetical protein OsI_35888 [Oryza sativa Indica Group]
Length = 430
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/247 (55%), Positives = 185/247 (74%)
Query: 55 DEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGI 114
++ + +A I +KD AL+ AL Q+ + FG+ES++ L +G + PVISTGS LD+ALGI
Sbjct: 57 EDGYSEANIKKKDFALQQALDQIKSAFGEESIMWLNHSYGPKEVPVISTGSFALDMALGI 116
Query: 115 GGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAEN 174
GGLPKGR+VEIYG EASGKTTLALH+I EAQK GGYCA++D E+ALDP+LAE++G+ AE+
Sbjct: 117 GGLPKGRVVEIYGPEASGKTTLALHIIAEAQKNGGYCAFIDAEHALDPTLAESIGVKAEH 176
Query: 175 LLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQ 234
LL++QPD E L + D L +SGSIDV+VVDSVAAL+PK E+ + + Q+R+M+Q
Sbjct: 177 LLLSQPDCGEQALGLADILIRSGSIDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQ 236
Query: 235 ALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRL 294
ALRK+ +SL +S T+++F+NQVR + G G EVT GGNALKFYA++RL R L
Sbjct: 237 ALRKLSHSLSRSRTMLVFINQVRSKLSTFSGFGAPAEVTCGGNALKFYASVRLNTKRIGL 296
Query: 295 FKIADKV 301
K +++V
Sbjct: 297 IKKSEEV 303
>gi|115485181|ref|NP_001067734.1| Os11g0302700 [Oryza sativa Japonica Group]
gi|62732800|gb|AAX94919.1| recA protein, putative [Oryza sativa Japonica Group]
gi|77550150|gb|ABA92947.1| recA protein, expressed [Oryza sativa Japonica Group]
gi|113644956|dbj|BAF28097.1| Os11g0302700 [Oryza sativa Japonica Group]
gi|125576944|gb|EAZ18166.1| hypothetical protein OsJ_33715 [Oryza sativa Japonica Group]
gi|215707257|dbj|BAG93717.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 430
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 136/247 (55%), Positives = 185/247 (74%)
Query: 55 DEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGI 114
++ + +A I +KD AL+ AL Q+ + FG+ES++ L +G + PVISTGS LD+ALGI
Sbjct: 57 EDGYSEANIKKKDFALQQALDQIKSAFGEESIMWLNHSYGPKEVPVISTGSFALDMALGI 116
Query: 115 GGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAEN 174
GGLPKGR+VEIYG EASGKTTLALH+I EAQK GGYCA++D E+ALDP+LAE++G+ AE+
Sbjct: 117 GGLPKGRVVEIYGPEASGKTTLALHIIAEAQKNGGYCAFIDAEHALDPTLAESIGVKAEH 176
Query: 175 LLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQ 234
LL++QPD E L + D L +SGSIDV+VVDSVAAL+PK E+ + + Q+R+M+Q
Sbjct: 177 LLLSQPDCGEQALGLADILIRSGSIDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQ 236
Query: 235 ALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRL 294
ALRK+ +SL +S T+++F+NQVR + G G EVT GGNALKFYA++RL R L
Sbjct: 237 ALRKLSHSLSRSRTMLVFINQVRSKLSTFSGFGAPAEVTCGGNALKFYASVRLNTKRIGL 296
Query: 295 FKIADKV 301
K +++V
Sbjct: 297 IKKSEEV 303
>gi|357126357|ref|XP_003564854.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Brachypodium distachyon]
Length = 429
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 143/256 (55%), Positives = 187/256 (73%), Gaps = 7/256 (2%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ + +KD AL A+ Q+ + FGK +++ L R G R PV+STGS LDLALGIGGLPK
Sbjct: 57 EENMSKKDLALHQAIDQITSSFGKGAIMWLGRSEGHREVPVVSTGSFSLDLALGIGGLPK 116
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGG--YCAYLDVENALDPSLAEAMGIDAENLLI 177
GR+VE+YG EASGKTTLALHVI EAQK GG YCA++D E+ALDPSLAE++G+D NLL+
Sbjct: 117 GRVVEVYGPEASGKTTLALHVIAEAQKHGGGGYCAFIDAEHALDPSLAESIGVDTSNLLL 176
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPDSAE LS+VDTL +SGS+DV+VVDSVAAL+PK E+ + + Q+R+M+QALR
Sbjct: 177 SQPDSAEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALR 236
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK- 296
K+ +SL S T+++F+NQ+R + G G EVTSGGNALKFYA++RL + R L K
Sbjct: 237 KLSHSLSLSQTILLFINQIRAKVSTFGGFGGPTEVTSGGNALKFYASVRLNIRRVGLVKK 296
Query: 297 ----IADKVNILEVVN 308
I +VN+ V N
Sbjct: 297 GEETIGSQVNVKIVKN 312
>gi|326528635|dbj|BAJ97339.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 429
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/245 (55%), Positives = 185/245 (75%), Gaps = 3/245 (1%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ + +KD AL A+ Q+ FGK +++ L R G R PV+STGS LDLALGIGGLPK
Sbjct: 56 EENMSKKDLALHQAIDQITTSFGKGAIMWLGRSEGHREVPVVSTGSFSLDLALGIGGLPK 115
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKL--GGYCAYLDVENALDPSLAEAMGIDAENLLI 177
GR++E+YG EASGKTTLALHVI EAQKL GGYCA++D E+ALDP+LAE++G+D NLL+
Sbjct: 116 GRVIEVYGPEASGKTTLALHVIAEAQKLSGGGYCAFVDAEHALDPTLAESIGVDTSNLLL 175
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPDSAE LS+VDTL +SGS+DV+VVDSVAAL+PK E+ + + Q+R+M+QALR
Sbjct: 176 SQPDSAEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALR 235
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKS-GQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
K+ +SL S T+++F+NQ+R ++ G G G EVTSGGNALKFYA++RL + R + K
Sbjct: 236 KLSHSLSLSQTVLLFINQIRSKVQTFGGGFGGPQEVTSGGNALKFYASVRLNIRRIGMVK 295
Query: 297 IADKV 301
+++
Sbjct: 296 KGEEI 300
>gi|359484305|ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Vitis vinifera]
gi|297738654|emb|CBI27899.3| unnamed protein product [Vitis vinifera]
Length = 421
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 143/282 (50%), Positives = 190/282 (67%), Gaps = 18/282 (6%)
Query: 20 SLFPSFSQNGRRDAITCIGMNIHSLSSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLAN 79
S F +FS GRR + + D ++ + +K+ ALR AL Q+
Sbjct: 30 SQFCNFSSKGRRRSKS------------------DGSDSNEENLSKKELALRQALDQITT 71
Query: 80 DFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALH 139
FGK S++ L R S+ PV+STGS LD+ LGIGGLPKGR+VEIYG EASGKTTLALH
Sbjct: 72 SFGKGSIMWLGRSVSSKHVPVVSTGSFALDIVLGIGGLPKGRVVEIYGPEASGKTTLALH 131
Query: 140 VIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSI 199
VI EAQK GGYC ++D E+ALDP+LAEA+G++ +NLL++QPD E LS+VDTL +SGS+
Sbjct: 132 VIAEAQKQGGYCVFVDAEHALDPALAEAIGVNTQNLLLSQPDCGEQALSLVDTLIRSGSV 191
Query: 200 DVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFS 259
DV+VVDSVAAL+PK E+ + + Q+R+M+QALRK+ +SL S T++IF+NQVR
Sbjct: 192 DVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAK 251
Query: 260 AKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ G G EVT GGNALKFYA++RL + R L K ++
Sbjct: 252 LSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEET 293
>gi|293332481|ref|NP_001170211.1| uncharacterized protein LOC100384162 [Zea mays]
gi|224034357|gb|ACN36254.1| unknown [Zea mays]
gi|414879173|tpg|DAA56304.1| TPA: putative recA DNA recombination family protein [Zea mays]
Length = 425
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/254 (54%), Positives = 185/254 (72%), Gaps = 8/254 (3%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ + +KD AL A+ Q+ + FGK +++ L R G R PV+STGSL LD+ALG GGLPK
Sbjct: 56 EENMSKKDLALHQAIDQITSAFGKGAIMWLGRSQGHRDVPVVSTGSLDLDMALGTGGLPK 115
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GR+VE+YG EASGKTTLALHVI EAQK GGYCA++D E+ALDP+LAE++G+D NLL++Q
Sbjct: 116 GRVVEVYGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVDTNNLLLSQ 175
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD AE LS+VDTL +SGS+DV+VVDSVAAL+PK E+ + + Q+R+M+QALRK+
Sbjct: 176 PDCAEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHIALQARLMSQALRKL 235
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
+SL S T+++F+NQ+R + G G EVTSGGNALKFYA++RL + R L K +
Sbjct: 236 SHSLSLSQTILLFINQIRAKVAT-FGFGGPTEVTSGGNALKFYASVRLNIRRIGLVKKGE 294
Query: 300 KVNILEVVNIGSMI 313
+ IGS I
Sbjct: 295 ET-------IGSQI 301
>gi|212274305|ref|NP_001130273.1| uncharacterized protein LOC100191367 [Zea mays]
gi|194688718|gb|ACF78443.1| unknown [Zea mays]
gi|413951639|gb|AFW84288.1| putative recA DNA recombination family protein [Zea mays]
Length = 430
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 133/243 (54%), Positives = 180/243 (74%), Gaps = 1/243 (0%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D+ + +KD AL A+ Q+ + FGK +++ L R G R PV+STGS LD+ALG GGLP
Sbjct: 60 DEESMSKKDLALHQAIDQITSAFGKGAIMWLGRSQGLRDVPVVSTGSFALDMALGTGGLP 119
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGR++E+YG EASGKTTLALHVI EAQK GGYCA++D E+ALDP+LAE++G+D NLL++
Sbjct: 120 KGRVIEVYGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVDTNNLLVS 179
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD AE LS+VDTL +SGS+DV+VVDSVAAL+PK E+ + + Q+R+M+QALRK
Sbjct: 180 QPDCAEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALRK 239
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ +SL S T+++F+NQ+R + G G EVTSGGNALKFYA++RL + R K
Sbjct: 240 LSHSLSLSQTVLLFINQIRAKVAT-FGFGGPTEVTSGGNALKFYASVRLNIRRIGFLKEG 298
Query: 299 DKV 301
++
Sbjct: 299 EET 301
>gi|115441659|ref|NP_001045109.1| Os01g0901200 [Oryza sativa Japonica Group]
gi|56784510|dbj|BAD82767.1| putative recA protein [Oryza sativa Japonica Group]
gi|56784869|dbj|BAD82109.1| putative recA protein [Oryza sativa Japonica Group]
gi|113534640|dbj|BAF07023.1| Os01g0901200 [Oryza sativa Japonica Group]
gi|222619696|gb|EEE55828.1| hypothetical protein OsJ_04434 [Oryza sativa Japonica Group]
Length = 429
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 131/242 (54%), Positives = 179/242 (73%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ + +KD AL A+ Q+ + FGK +++ L R G R PV+STGS LDLALG GGLPK
Sbjct: 59 EENLSKKDLALHQAIDQITSAFGKGAIMWLGRSEGRREVPVVSTGSFSLDLALGTGGLPK 118
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GR++E+YG EASGKTTLALHVI EAQK GGYCA++D E+ALDP+LAE++G++ NLL++Q
Sbjct: 119 GRVIEVYGPEASGKTTLALHVIAEAQKHGGYCAFVDAEHALDPALAESIGVNTSNLLLSQ 178
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD E LS+VDTL +SGS+DV+VVDSVAAL+PK E+ + + Q+R+M+QALRK+
Sbjct: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHVALQARLMSQALRKL 238
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
+SL S T+++F+NQ+R + G G EVTSGGNALKFYA++R+ + R L K +
Sbjct: 239 SHSLSLSQTILLFINQIRSKVTTFGGFGGPMEVTSGGNALKFYASVRMNIKRIGLVKKGE 298
Query: 300 KV 301
+
Sbjct: 299 ET 300
>gi|4191779|gb|AAD10148.1| putative recA protein [Arabidopsis thaliana]
Length = 376
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 135/238 (56%), Positives = 174/238 (73%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K+ AL+ AL Q+ + FGK S++ L R R PV STGS LD+ALG+GGLPKGR+VE
Sbjct: 3 KKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG EASGKTTLALHVI EAQK GG C ++D E+ALD SLA+A+G++ ENLL++QPD E
Sbjct: 63 IYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
LS+VDTL +SGS+DVIVVDSVAAL+PK E+ + + Q+R+M+QALRK+ +SL
Sbjct: 123 QALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLS 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
S TL+IF+NQVR + G G EVT GGNALKFYA++RL + R L K ++
Sbjct: 183 LSQTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETT 240
>gi|42569151|ref|NP_179539.2| DNA repair protein recA-like 3 [Arabidopsis thaliana]
gi|209572665|sp|Q9ZUP2.2|RECA3_ARATH RecName: Full=DNA repair protein recA homolog 3, mitochondrial;
AltName: Full=Recombinase A homolog 3; Flags: Precursor
gi|119935859|gb|ABM06015.1| At2g19490 [Arabidopsis thaliana]
gi|330251794|gb|AEC06888.1| DNA repair protein recA-like 3 [Arabidopsis thaliana]
Length = 430
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 136/249 (54%), Positives = 177/249 (71%)
Query: 54 DDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALG 113
D + + +K+ AL+ AL Q+ + FGK S++ L R R PV STGS LD+ALG
Sbjct: 46 DGNGSSEEGMSKKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALG 105
Query: 114 IGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAE 173
+GGLPKGR+VEIYG EASGKTTLALHVI EAQK GG C ++D E+ALD SLA+A+G++ E
Sbjct: 106 VGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTE 165
Query: 174 NLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMT 233
NLL++QPD E LS+VDTL +SGS+DVIVVDSVAAL+PK E+ + + Q+R+M+
Sbjct: 166 NLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMS 225
Query: 234 QALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTR 293
QALRK+ +SL S TL+IF+NQVR + G G EVT GGNALKFYA++RL + R
Sbjct: 226 QALRKLSHSLSLSQTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIG 285
Query: 294 LFKIADKVN 302
L K ++
Sbjct: 286 LIKKGEETT 294
>gi|242059571|ref|XP_002458931.1| hypothetical protein SORBIDRAFT_03g042890 [Sorghum bicolor]
gi|241930906|gb|EES04051.1| hypothetical protein SORBIDRAFT_03g042890 [Sorghum bicolor]
Length = 427
Score = 243 bits (621), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 137/254 (53%), Positives = 183/254 (72%), Gaps = 8/254 (3%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ + +KD AL A+ Q+ + FGK +++ L R G R PV+STGS LD+ALG GGLPK
Sbjct: 58 EENMSKKDLALHQAIDQITSAFGKGAIMWLGRSQGHRDVPVVSTGSFALDMALGTGGLPK 117
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GR++E+YG EASGKTTLALHVI EAQK GGYCA++D E+ALDP+LAE +G+D NLL++Q
Sbjct: 118 GRVIEVYGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAEKIGVDTNNLLLSQ 177
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD AE LS+VDTL +SGS+DV+VVDSVAAL+PK E+ + + Q+R+M+QALRK+
Sbjct: 178 PDCAEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALRKL 237
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
+SL S T+++F+NQ+R + G G EVTSGGNALKFYA++RL + R L K +
Sbjct: 238 SHSLSLSQTILLFINQIRAKVAT-FGFGGPTEVTSGGNALKFYASVRLNIRRIGLVKKGE 296
Query: 300 KVNILEVVNIGSMI 313
+ IGS I
Sbjct: 297 ET-------IGSQI 303
>gi|356503420|ref|XP_003520507.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein recA homolog 2,
mitochondrial-like [Glycine max]
Length = 267
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/180 (70%), Positives = 147/180 (81%), Gaps = 2/180 (1%)
Query: 34 ITCIGMNIHSLSSAAEVPEFD-DEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRF 92
+T IGMN SLSSAAE +F+ D HDD K KDNAL LALSQL ++F K SMLSL++
Sbjct: 1 MTRIGMNACSLSSAAEASDFECDVTHDDVKAADKDNALCLALSQLVSEFSKXSMLSLQKI 60
Query: 93 FGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCA 152
FG RR VIS GSLKL LALGI GLPKGRIVEIYGR+A+GKTT+AL +IKEAQKLGGYCA
Sbjct: 61 FGVRRARVISIGSLKLHLALGIRGLPKGRIVEIYGRDAAGKTTIALRIIKEAQKLGGYCA 120
Query: 153 YLDVENALDPSLAEAMGIDAENLL-IAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALI 211
YLDVENALD SL E+MG+D ENLL I+ PD AENLLS+V TLTKSG++DVIV+DSV ++
Sbjct: 121 YLDVENALDFSLMESMGVDTENLLIISHPDCAENLLSMVVTLTKSGAVDVIVIDSVEGVM 180
>gi|414161981|ref|ZP_11418228.1| protein recA [Afipia felis ATCC 53690]
gi|410879761|gb|EKS27601.1| protein recA [Afipia felis ATCC 53690]
Length = 360
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 168/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S VIS+GSL LD+ALG+GGLPKGR+V
Sbjct: 14 MDKTKALTAALSQIERQFGKGSVMRLGKADRSMDIEVISSGSLGLDIALGVGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGTCAFIDAEHALDPVYARKLGVNVDELLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+SHT++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 194 NKSHTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRTGAIKERDEV 248
>gi|395786463|ref|ZP_10466190.1| protein recA [Bartonella tamiae Th239]
gi|423716644|ref|ZP_17690834.1| protein recA [Bartonella tamiae Th307]
gi|395422761|gb|EJF88957.1| protein recA [Bartonella tamiae Th239]
gi|395428718|gb|EJF94793.1| protein recA [Bartonella tamiae Th307]
Length = 360
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/240 (53%), Positives = 166/240 (69%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGR
Sbjct: 12 KTVDKSKALDAALSQIERSFGKGSIMRLGQNEQVVEIETIPTGSLSLDIALGVGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALHTIAEAQKRGGICAFIDAEHALDPVYARKLGVDLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIDGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 192 SIARSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIKDRDEV 248
>gi|195638478|gb|ACG38707.1| DNA repair protein recA [Zea mays]
Length = 430
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/243 (54%), Positives = 179/243 (73%), Gaps = 1/243 (0%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D+ + +KD AL A+ Q+ + FGK +++ L R G R PV+STGS LD+ALG GGLP
Sbjct: 60 DEESMSKKDLALHQAIDQITSAFGKGAIMWLGRSQGLRDVPVVSTGSFALDMALGTGGLP 119
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGR++E+YG EASGKTTLALHVI EAQK GGYCA++D E+ALDP+LAE++ +D NLL++
Sbjct: 120 KGRVIEVYGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIXVDTNNLLVS 179
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD AE LS+VDTL +SGS+DV+VVDSVAAL+PK E+ + + Q+R+M+QALRK
Sbjct: 180 QPDCAEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALRK 239
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ +SL S T+++F+NQ+R + G G EVTSGGNALKFYA++RL + R K
Sbjct: 240 LSHSLSLSQTVLLFINQIRAKVAT-FGFGGPTEVTSGGNALKFYASVRLNIRRIGFLKEG 298
Query: 299 DKV 301
++
Sbjct: 299 EET 301
>gi|254456368|ref|ZP_05069797.1| protein RecA [Candidatus Pelagibacter sp. HTCC7211]
gi|207083370|gb|EDZ60796.1| protein RecA [Candidatus Pelagibacter sp. HTCC7211]
Length = 382
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 127/242 (52%), Positives = 171/242 (70%), Gaps = 10/242 (4%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPK 119
I +K+ AL A++Q+ ++FGK S++ L G +R +STGSL LDLALGIGGLPK
Sbjct: 19 IKEKNKALDAAIAQITDNFGKGSVMKL----GQKRAMDIESVSTGSLSLDLALGIGGLPK 74
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRIVE+YG E+SGKTTLAL V+ EAQK GG CA++D E+ALDP A+ +G++ E LLI+Q
Sbjct: 75 GRIVEVYGPESSGKTTLALQVVAEAQKAGGICAFVDAEHALDPVYAKKLGVNTEELLISQ 134
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL KSGSI VIV+DSVAAL PK EI + + QSR+M+QALRK+
Sbjct: 135 PDAGEQALEIADTLVKSGSISVIVIDSVAALTPKAEIEGEMGDHHVGLQSRLMSQALRKL 194
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
S+ ++T++IF+NQ+R K G G E TSGGNALKFY+++R+ + R K D
Sbjct: 195 TSSISNTNTMMIFINQIRM--KIGVMFGS-PETTSGGNALKFYSSVRMDIRRIGAIKDKD 251
Query: 300 KV 301
++
Sbjct: 252 EI 253
>gi|119713373|gb|ABL97436.1| recA DNA recombination protein [uncultured marine bacterium
EB80_69G07]
Length = 382
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 128/242 (52%), Positives = 171/242 (70%), Gaps = 10/242 (4%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPK 119
I +K+ AL A+SQ+ ++FGK S++ L G +R ISTGSL LDLALGIGGLPK
Sbjct: 19 IKEKNKALDAAISQITDNFGKGSVMKL----GEKRAMDIESISTGSLSLDLALGIGGLPK 74
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+E+YG E+SGKTTLAL V+ EAQK GG CA++D E+ALDP A+ +G++ E LLI+Q
Sbjct: 75 GRIIEVYGPESSGKTTLALQVVAEAQKAGGICAFVDAEHALDPVYAKKLGVNTEELLISQ 134
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL KSGSI VIV+DSVAAL PK EI + + QSR+M+QALRK+
Sbjct: 135 PDAGEQALEIADTLVKSGSISVIVIDSVAALTPKAEIEGEMGDHHVGLQSRLMSQALRKL 194
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
S+ ++T++IF+NQ+R K G G E TSGGNALKFY+++R+ + R K D
Sbjct: 195 TGSISNTNTMMIFINQIRM--KIGVMFGS-PETTSGGNALKFYSSVRMDIRRIGAIKDKD 251
Query: 300 KV 301
++
Sbjct: 252 EI 253
>gi|409400599|ref|ZP_11250623.1| recombinase A [Acidocella sp. MX-AZ02]
gi|409130485|gb|EKN00250.1| recombinase A [Acidocella sp. MX-AZ02]
Length = 364
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 171/239 (71%), Gaps = 3/239 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
++K+ AL A++Q+ FGK S++ + G+ VIS+GSL LDLALGIGGLP+GR++
Sbjct: 21 LEKNKALDAAMAQIERAFGKGSIMRMGAKGGNEAIEVISSGSLGLDLALGIGGLPRGRVI 80
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 81 EIYGPESSGKTTLALHAVAEAQKRGGVCAFVDAEHALDPIYARKLGVDVDNLLISQPDTG 140
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SGSIDV+V+DSVAAL+P+ E+ + + +R+M+QALRKI S+
Sbjct: 141 EQGLEIADTLVRSGSIDVLVIDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKITGSV 200
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+S+T +IFLNQ+R K G G E T+GGNALKFY+++R+ + RT K D+V
Sbjct: 201 ARSNTTLIFLNQIRL--KIGVMFGN-PETTTGGNALKFYSSIRMEIRRTGSIKERDEVT 256
>gi|148256739|ref|YP_001241324.1| recombinase A [Bradyrhizobium sp. BTAi1]
gi|146408912|gb|ABQ37418.1| RecA protein [Bradyrhizobium sp. BTAi1]
Length = 362
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +STGSL LD+ALGIGGLPKGR++
Sbjct: 14 MDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSTGSLGLDIALGIGGLPKGRVI 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+SHT++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 NKSHTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASIRLDIRRIGAIKERDEV 248
>gi|456354260|dbj|BAM88705.1| recombinase A [Agromonas oligotrophica S58]
Length = 349
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +STGSL LD+ALGIGGLPKGR+V
Sbjct: 1 MDKSKALSAALSQIERQFGKGSVMRLGKNDRSMDVETVSTGSLGLDIALGIGGLPKGRVV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+SHT++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 181 NKSHTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 235
>gi|406705826|ref|YP_006756179.1| recombinase A [alpha proteobacterium HIMB5]
gi|406651602|gb|AFS47002.1| RecA protein [alpha proteobacterium HIMB5]
Length = 385
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 126/242 (52%), Positives = 171/242 (70%), Gaps = 10/242 (4%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPK 119
+ +K+ AL A+SQ+ ++FGK S++ L G +R +STGSL LDLALGIGGLPK
Sbjct: 19 LKEKNKALDAAISQITDNFGKGSVMKL----GEKRAMDVESVSTGSLSLDLALGIGGLPK 74
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+E+YG E+SGKTTLAL V+ EAQK GG CA++D E+ALDP A+ +G++ E LLI+Q
Sbjct: 75 GRIIEVYGPESSGKTTLALQVVAEAQKSGGICAFVDAEHALDPVYAKKLGVNTEELLISQ 134
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL KSGSI VIV+DSVAAL PK EI + + QSR+M+QALRK+
Sbjct: 135 PDTGEQALEIADTLVKSGSISVIVIDSVAALTPKAEIEGEMGDHHVGLQSRLMSQALRKL 194
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
S+ ++T++IF+NQ+R K G G E TSGGNALKFY+++R+ + R K D
Sbjct: 195 TGSISNTNTMMIFINQIRM--KIGVMFGS-PETTSGGNALKFYSSVRMDIRRIGAIKDKD 251
Query: 300 KV 301
++
Sbjct: 252 EI 253
>gi|148260042|ref|YP_001234169.1| recombinase A [Acidiphilium cryptum JF-5]
gi|326403005|ref|YP_004283086.1| recombinase A [Acidiphilium multivorum AIU301]
gi|338988950|ref|ZP_08633843.1| Protein recA [Acidiphilium sp. PM]
gi|189039588|sp|A5FXB8.1|RECA_ACICJ RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|146401723|gb|ABQ30250.1| recA protein [Acidiphilium cryptum JF-5]
gi|325049866|dbj|BAJ80204.1| recombinase A [Acidiphilium multivorum AIU301]
gi|338206126|gb|EGO94369.1| Protein recA [Acidiphilium sp. PM]
Length = 343
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 169/239 (70%), Gaps = 3/239 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M+K+ AL AL+Q+ FGK S++ + S VISTGSL LDLALGIGGLP+GR++
Sbjct: 1 MEKNKALDAALAQIERAFGKGSIMRMGSRSESEAIDVISTGSLGLDLALGIGGLPRGRVI 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAVAEAQKRGGTCAFVDAEHALDPIYARKLGVDVDNLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 121 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+S TL+IFLNQ+R K G G E T+GGNALKFYA++R+ + R K ++V
Sbjct: 181 SRSKTLVIFLNQIRL--KIGVMFGN-PETTTGGNALKFYASIRMDIRRIGSIKDREEVT 236
>gi|27380866|ref|NP_772395.1| recombinase A [Bradyrhizobium japonicum USDA 110]
gi|37537946|sp|Q89I84.1|RECA_BRAJA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|27354032|dbj|BAC51020.1| RecA protein [Bradyrhizobium japonicum USDA 110]
Length = 362
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 14 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+SHT++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 NKSHTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 248
>gi|365855071|ref|ZP_09395128.1| RecA protein [Acetobacteraceae bacterium AT-5844]
gi|363719510|gb|EHM02817.1| RecA protein [Acetobacteraceae bacterium AT-5844]
Length = 353
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 127/241 (52%), Positives = 171/241 (70%), Gaps = 5/241 (2%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K+ AL ALSQ+ FGK S++ + S VI TGSL LDLALGIGGLPKGRI+
Sbjct: 8 MDKNKALDAALSQIERAFGKGSIMRMGAKQQSDEVEVIPTGSLGLDLALGIGGLPKGRII 67
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 68 EIYGPESSGKTTLALHAIAEAQKRGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAG 127
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ ++
Sbjct: 128 EQALEICDTLVRSGAVDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGTV 187
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNI 303
+S+ L+IFLNQ+R K G G E T+GGNALKFYA++RL + R+ +I D+ N+
Sbjct: 188 SRSNCLLIFLNQIRL--KIGVMFGN-PETTTGGNALKFYASVRLEI--RRIGQIKDRDNV 242
Query: 304 L 304
+
Sbjct: 243 V 243
>gi|91762224|ref|ZP_01264189.1| recA protein [Candidatus Pelagibacter ubique HTCC1002]
gi|91718026|gb|EAS84676.1| recA protein [Candidatus Pelagibacter ubique HTCC1002]
Length = 383
Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 126/240 (52%), Positives = 170/240 (70%), Gaps = 10/240 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
+K+ AL A+SQ+ ++FGK S++ L G RR ISTGSL LD+ALGIGGLPKGR
Sbjct: 21 EKNKALDAAMSQIIDNFGKGSVMKL----GQRRAMDVESISTGSLSLDVALGIGGLPKGR 76
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
++E+YG E+SGKTTLAL V+ EAQK GG CA++D E+ALDP A+ +G+D E LLI+QPD
Sbjct: 77 VIEVYGPESSGKTTLALQVLAEAQKAGGICAFIDAEHALDPIYAKKLGVDTEELLISQPD 136
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL KSGSI VIV+DSVAAL P+ EI + + QSR+M+QALRK+
Sbjct: 137 TGEQALEIADTLVKSGSISVIVIDSVAALTPRAEIEGEMGDHHVGLQSRLMSQALRKLTG 196
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++T++IF+NQ+R K G G E TSGGNALKFY+++R+ + R K D++
Sbjct: 197 SISSTNTMMIFINQIRM--KIGVMFGS-PETTSGGNALKFYSSVRMDIRRIGAIKNGDEI 253
>gi|163794127|ref|ZP_02188100.1| RecA protein [alpha proteobacterium BAL199]
gi|159180741|gb|EDP65260.1| RecA protein [alpha proteobacterium BAL199]
Length = 360
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/241 (51%), Positives = 169/241 (70%), Gaps = 9/241 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + G+ +STGS+ LD+ALGIGGLP+GR+V
Sbjct: 13 MDKSKALEAALSQIERAFGKGSVMKLGQREGAVEIDTVSTGSIGLDIALGIGGLPRGRVV 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL+LHV+ EAQK GG CA++D E+ALDP A +G+D + LLI+QPD+
Sbjct: 73 EIYGPESSGKTTLSLHVVAEAQKAGGTCAFVDAEHALDPIYARKLGVDVDELLISQPDTG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + Q+R+M+QALRK+ S+
Sbjct: 133 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDTHVGLQARLMSQALRKLTGSI 192
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRM---DEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
+S ++IF+NQ+R Q +G M E T+GGNALKFYA++RL + R K D+
Sbjct: 193 SKSRCMVIFINQIR------QKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKDRDE 246
Query: 301 V 301
V
Sbjct: 247 V 247
>gi|304570555|ref|YP_266064.2| recA protein [Candidatus Pelagibacter ubique HTCC1062]
Length = 383
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/240 (52%), Positives = 170/240 (70%), Gaps = 10/240 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
+K+ AL A+SQ+ ++FGK S++ L G RR ISTGSL LD+ALGIGGLPKGR
Sbjct: 21 EKNKALDAAMSQIIDNFGKGSVMKL----GQRRAMDVESISTGSLSLDVALGIGGLPKGR 76
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
++E+YG E+SGKTTLAL V+ EAQK GG CA++D E+ALDP A+ +G+D E LLI+QPD
Sbjct: 77 VIEVYGPESSGKTTLALQVLAEAQKAGGICAFIDAEHALDPIYAKKLGVDTEELLISQPD 136
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL KSGSI VIV+DSVAAL P+ EI + + QSR+M+QALRK+
Sbjct: 137 TGEQALEIADTLVKSGSISVIVIDSVAALTPRAEIEGEMGDHHVGLQSRLMSQALRKLTG 196
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++T++IF+NQ+R K G G E TSGGNALKFY+++R+ + R K D++
Sbjct: 197 SISSTNTMMIFINQIRM--KIGVMFGS-PETTSGGNALKFYSSVRMDIRRIGAIKNGDEI 253
>gi|209884571|ref|YP_002288428.1| recombinase A [Oligotropha carboxidovorans OM5]
gi|337741760|ref|YP_004633488.1| recombinase A [Oligotropha carboxidovorans OM5]
gi|386030776|ref|YP_005951551.1| recombinase A [Oligotropha carboxidovorans OM4]
gi|209872767|gb|ACI92563.1| protein RecA [Oligotropha carboxidovorans OM5]
gi|336095844|gb|AEI03670.1| recombinase A [Oligotropha carboxidovorans OM4]
gi|336099424|gb|AEI07247.1| recombinase A [Oligotropha carboxidovorans OM5]
Length = 360
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 169/238 (71%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S VIS+GSL LD+ALG+GGLPKGRIV
Sbjct: 14 MDKTKALTAALSQIERQFGKGSVMRLGKNDRSMDIEVISSGSLGLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD
Sbjct: 74 EIYGPESSGKTTLALHAVAEAQKKGGTCAFIDAEHALDPVYARKLGVNVDDLLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 194 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRTGAIKERDEV 248
>gi|299131743|ref|ZP_07024938.1| recA protein [Afipia sp. 1NLS2]
gi|298591880|gb|EFI52080.1| recA protein [Afipia sp. 1NLS2]
Length = 360
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S VIS+GSL LD+ALG+GGLPKGR+V
Sbjct: 14 MDKTKALTAALSQIERQFGKGSVMRLGKADRSMDIEVISSGSLGLDIALGVGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGTCAFIDAEHALDPVYARKLGVNVDELLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+SHT++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 NKSHTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 248
>gi|146341855|ref|YP_001206903.1| recombinase A [Bradyrhizobium sp. ORS 278]
gi|146194661|emb|CAL78686.1| Recombinase A (recA) [Bradyrhizobium sp. ORS 278]
Length = 362
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +STGSL LD+ALGIGGLPKGRIV
Sbjct: 14 MDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSTGSLGLDIALGIGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 248
>gi|323137974|ref|ZP_08073048.1| recA protein [Methylocystis sp. ATCC 49242]
gi|322396693|gb|EFX99220.1| recA protein [Methylocystis sp. ATCC 49242]
Length = 356
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/237 (52%), Positives = 168/237 (70%), Gaps = 3/237 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + + ISTGSL LD+ALG+GGLP+GR+V
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGKNQKAVEIETISTGSLGLDIALGVGGLPRGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LHVI EAQK+GG CA++D E+ALDP A +G++ E LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLTLHVIAEAQKMGGVCAFVDAEHALDPVYARKLGVNLEELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL P+ EI + + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDVQPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
+S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+
Sbjct: 194 ARSNTLVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRTGSIKDRDE 247
>gi|365880391|ref|ZP_09419764.1| Recombinase A (recA) [Bradyrhizobium sp. ORS 375]
gi|367472759|ref|ZP_09472335.1| Recombinase A (recA) [Bradyrhizobium sp. ORS 285]
gi|365274942|emb|CCD84803.1| Recombinase A (recA) [Bradyrhizobium sp. ORS 285]
gi|365291554|emb|CCD92295.1| Recombinase A (recA) [Bradyrhizobium sp. ORS 375]
Length = 362
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +STGSL LD+ALGIGGLPKGRIV
Sbjct: 14 MDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSTGSLGLDIALGIGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 248
>gi|402771503|ref|YP_006591040.1| protein RecA (Recombinase A) [Methylocystis sp. SC2]
gi|401773523|emb|CCJ06389.1| Protein RecA (Recombinase A) [Methylocystis sp. SC2]
Length = 341
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/233 (53%), Positives = 166/233 (71%), Gaps = 3/233 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + + ISTGSL LD+ALG+GGLP+GR+V
Sbjct: 1 MDKTKALDAALSQIERAFGKGSIMRLGKNQKAVEIETISTGSLGLDIALGVGGLPRGRVV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LHVI EAQKLGG CA++D E+ALDP A +G++ E+LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLTLHVIAEAQKLGGVCAFVDAEHALDPIYARKLGVNLEDLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL P+ EI + + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDVQPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 181 ARSNTLVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIK 230
>gi|365898638|ref|ZP_09436583.1| Recombinase A (recA) [Bradyrhizobium sp. STM 3843]
gi|365420549|emb|CCE09125.1| Recombinase A (recA) [Bradyrhizobium sp. STM 3843]
Length = 362
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S ISTGSL LD+ALG+GGLPKGRIV
Sbjct: 14 MDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDIETISTGSLGLDVALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 248
>gi|365891769|ref|ZP_09430150.1| Recombinase A (recA) [Bradyrhizobium sp. STM 3809]
gi|365332255|emb|CCE02681.1| Recombinase A (recA) [Bradyrhizobium sp. STM 3809]
Length = 349
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +STGSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSTGSLGLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEICDTLVRSGAVDVMVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 181 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 235
>gi|224122482|ref|XP_002330492.1| predicted protein [Populus trichocarpa]
gi|222872426|gb|EEF09557.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/242 (54%), Positives = 176/242 (72%), Gaps = 1/242 (0%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+KD AL+ AL Q+ + FGK S++ R + PV+STGS LD+ALG GG PKGR+VE
Sbjct: 2 KKDLALQQALDQITSQFGKGSIMWFGRSEAPKNVPVVSTGSFALDIALGCGGFPKGRVVE 61
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
I+G EASGKTTLALHVI EAQK GGYC ++D E+ALD SLA+A+G++ ENLL++QPD E
Sbjct: 62 IFGPEASGKTTLALHVIAEAQKQGGYCVFMDAEHALDSSLAKAIGVNTENLLLSQPDCGE 121
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
LS+VDTL +SGS+DV+VVDSVAAL+PK E+ + + Q+R+M+QALRK+ +SL
Sbjct: 122 QALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHMAMQARLMSQALRKLSHSLS 181
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNIL 304
QS T++IF+NQVR + S G G EVT GGNALKFYA++RL + R K ++
Sbjct: 182 QSQTVLIFINQVR-AKLSTFGFGGPTEVTCGGNALKFYASVRLNIRRVGFIKKGEETTGT 240
Query: 305 EV 306
+V
Sbjct: 241 QV 242
>gi|347736632|ref|ZP_08869218.1| RecA protein [Azospirillum amazonense Y2]
gi|346919818|gb|EGY01190.1| RecA protein [Azospirillum amazonense Y2]
Length = 358
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 166/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL Q+ FGK S++ L S ISTGSL LD+ALGIGGLP+GRI+
Sbjct: 12 MDKQKALDAALGQIERAFGKGSIMKLGAKEASMEVDAISTGSLGLDIALGIGGLPRGRII 71
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDPS A +G++ ++LL++QPD+
Sbjct: 72 EIYGPESSGKTTLALHAIAEAQKSGGTCAFVDAEHALDPSYARKLGVNVDDLLVSQPDAG 131
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + Q+R+M+QALRK+ S+
Sbjct: 132 EQALEITDTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKLTSSI 191
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ L+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 192 SKSNCLVIFINQIRL--KIGVMFGN-PETTTGGNALKFYASIRLDIRRIGAIKDRDNV 246
>gi|90818650|emb|CAJ32630.1| recombinase A [Ochrobactrum anthropi]
gi|90818652|emb|CAJ32631.1| recombinase A [Ochrobactrum anthropi]
gi|90818666|emb|CAJ32638.1| recombinase A [Ochrobactrum intermedium]
Length = 355
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/244 (52%), Positives = 167/244 (68%), Gaps = 3/244 (1%)
Query: 58 HDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGL 117
H + + K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGL
Sbjct: 8 HVEENSVDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI
Sbjct: 68 PKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKI 297
K+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 188 KLTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKE 244
Query: 298 ADKV 301
D+V
Sbjct: 245 RDEV 248
>gi|90818644|emb|CAJ32627.1| recombinase A [Ochrobactrum anthropi]
gi|90818646|emb|CAJ32628.1| recombinase A [Ochrobactrum anthropi]
Length = 355
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/244 (52%), Positives = 167/244 (68%), Gaps = 3/244 (1%)
Query: 58 HDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGL 117
H + + K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGL
Sbjct: 8 HVEENSVDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI
Sbjct: 68 PKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKI 297
K+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 188 KLTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKE 244
Query: 298 ADKV 301
D+V
Sbjct: 245 RDEV 248
>gi|338975244|ref|ZP_08630599.1| RecA protein [Bradyrhizobiaceae bacterium SG-6C]
gi|414167541|ref|ZP_11423769.1| protein recA [Afipia clevelandensis ATCC 49720]
gi|338231843|gb|EGP06978.1| RecA protein [Bradyrhizobiaceae bacterium SG-6C]
gi|410889873|gb|EKS37674.1| protein recA [Afipia clevelandensis ATCC 49720]
Length = 362
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 166/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 14 MDKTKALSAALSQIERQFGKGSVMKLGKNDRSMEVEAVSSGSLGLDIALGIGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDELLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+SHT++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 NKSHTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGQIKERDEV 248
>gi|260883955|ref|ZP_05895569.1| recombinase A [Brucella abortus bv. 9 str. C68]
gi|261222365|ref|ZP_05936646.1| recombinase A [Brucella ceti B1/94]
gi|265988866|ref|ZP_06101423.1| recombinase A [Brucella pinnipedialis M292/94/1]
gi|265991280|ref|ZP_06103837.1| recombinase A [Brucella melitensis bv. 1 str. Rev.1]
gi|265995117|ref|ZP_06107674.1| recombinase A [Brucella melitensis bv. 3 str. Ether]
gi|265998330|ref|ZP_06110887.1| recombinase A [Brucella ceti M490/95/1]
gi|294852537|ref|ZP_06793210.1| RecA protein [Brucella sp. NVSL 07-0026]
gi|376273069|ref|YP_005151647.1| recA protein [Brucella abortus A13334]
gi|376276188|ref|YP_005116627.1| recA protein [Brucella canis HSK A52141]
gi|384211568|ref|YP_005600650.1| recA protein [Brucella melitensis M5-90]
gi|384408675|ref|YP_005597296.1| RecA bacterial DNA recombination protein [Brucella melitensis M28]
gi|384445257|ref|YP_005603976.1| recA protein [Brucella melitensis NI]
gi|260873483|gb|EEX80552.1| recombinase A [Brucella abortus bv. 9 str. C68]
gi|260920949|gb|EEX87602.1| recombinase A [Brucella ceti B1/94]
gi|262552798|gb|EEZ08788.1| recombinase A [Brucella ceti M490/95/1]
gi|262766230|gb|EEZ12019.1| recombinase A [Brucella melitensis bv. 3 str. Ether]
gi|263002064|gb|EEZ14639.1| recombinase A [Brucella melitensis bv. 1 str. Rev.1]
gi|264661063|gb|EEZ31324.1| recombinase A [Brucella pinnipedialis M292/94/1]
gi|294821126|gb|EFG38125.1| RecA protein [Brucella sp. NVSL 07-0026]
gi|326409222|gb|ADZ66287.1| RecA bacterial DNA recombination protein [Brucella melitensis M28]
gi|326538931|gb|ADZ87146.1| recA protein [Brucella melitensis M5-90]
gi|349743248|gb|AEQ08791.1| recA protein [Brucella melitensis NI]
gi|363400675|gb|AEW17645.1| recA protein [Brucella abortus A13334]
gi|363404755|gb|AEW15050.1| recA protein [Brucella canis HSK A52141]
Length = 348
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 181 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 235
>gi|261325290|ref|ZP_05964487.1| recombinase A [Brucella neotomae 5K33]
gi|261301270|gb|EEY04767.1| recombinase A [Brucella neotomae 5K33]
Length = 348
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 181 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 235
>gi|90818648|emb|CAJ32629.1| recombinase A [Ochrobactrum anthropi]
Length = 355
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/244 (52%), Positives = 167/244 (68%), Gaps = 3/244 (1%)
Query: 58 HDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGL 117
H + + K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGL
Sbjct: 8 HVEDNSVDKTKALDAALSQIERAFGKGSIMRLGQNDKVVEIETVSTGSLSLDIALGVGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI
Sbjct: 68 PKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKI 297
K+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 188 KLTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKE 244
Query: 298 ADKV 301
D+V
Sbjct: 245 RDEV 248
>gi|398380107|ref|ZP_10538225.1| protein RecA [Rhizobium sp. AP16]
gi|397721423|gb|EJK81971.1| protein RecA [Rhizobium sp. AP16]
Length = 348
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 164/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 235
>gi|343131436|gb|AEL89245.1| recombinase A, partial [Ochrobactrum pecoris]
gi|343131438|gb|AEL89246.1| recombinase A, partial [Ochrobactrum pecoris]
Length = 355
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 127/244 (52%), Positives = 167/244 (68%), Gaps = 3/244 (1%)
Query: 58 HDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGL 117
H + + K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGL
Sbjct: 8 HVEENSVDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI
Sbjct: 68 PKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG+IDV+V+DSVAAL P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKI 297
K+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 188 KLTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKE 244
Query: 298 ADKV 301
D+V
Sbjct: 245 RDEV 248
>gi|340779200|ref|ZP_08699143.1| recA protein [Acetobacter aceti NBRC 14818]
Length = 343
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 127/241 (52%), Positives = 169/241 (70%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL ALSQ+ FGK S++ L G R ISTGSL LD+ALGIGG+P+G
Sbjct: 3 MDKTKALEGALSQIERAFGKGSIMRL----GQRPKEEADAISTGSLGLDIALGIGGMPRG 58
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALH+I EAQK GG CA++D E+ALDP A +G+D +NLLI+QP
Sbjct: 59 RIVEIYGPESSGKTTLALHIIAEAQKKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQP 118
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 119 DAGEQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 178
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
++ +S+TL++FLNQ+R K G G E T+GGNALKFYA++RL + R K D+
Sbjct: 179 GTVSRSNTLLVFLNQIRL--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGSIKDKDE 235
Query: 301 V 301
V
Sbjct: 236 V 236
>gi|89473577|emb|CAJ34601.1| recombinase A [Ochrobactrum lupini]
gi|89473579|emb|CAJ34602.1| recombinase A [Ochrobactrum anthropi]
gi|90818638|emb|CAJ32624.1| recombinase A [Ochrobactrum anthropi ATCC 49188]
gi|90818640|emb|CAJ32625.1| recombinase A [Ochrobactrum anthropi]
gi|90818642|emb|CAJ32626.1| recombinase A [Ochrobactrum tritici]
gi|90818654|emb|CAJ32632.1| recombinase A [Ochrobactrum anthropi]
gi|90818660|emb|CAJ32635.1| recombinase A [Ochrobactrum anthropi]
gi|90818662|emb|CAJ32636.1| recombinase A [Ochrobactrum anthropi]
gi|90818674|emb|CAJ43897.1| recombinase A [Ochrobactrum anthropi]
gi|343131440|gb|AEL89247.1| recombinase A, partial [Ochrobactrum anthropi]
Length = 355
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 130/249 (52%), Positives = 168/249 (67%), Gaps = 13/249 (5%)
Query: 58 HDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLAL 112
H + + K AL ALSQ+ FGK S++ L + PVI TGSL LD+AL
Sbjct: 8 HVEENSVDKTKALDAALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIAL 62
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
G+GGLPKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D
Sbjct: 63 GVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDL 122
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M
Sbjct: 123 ENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLM 182
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRT 292
+QALRK+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 183 SQALRKLTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRI 239
Query: 293 RLFKIADKV 301
K D+V
Sbjct: 240 GSIKERDEV 248
>gi|114707287|ref|ZP_01440184.1| recombinase A [Fulvimarina pelagi HTCC2506]
gi|114537168|gb|EAU40295.1| recombinase A [Fulvimarina pelagi HTCC2506]
Length = 357
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 126/239 (52%), Positives = 165/239 (69%), Gaps = 3/239 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + S +STGSL LD+ALGIGGLPKGR++
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMKLGQNNQSVEVETVSTGSLGLDIALGIGGLPKGRVI 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLL++QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPIYARKLGVDLENLLVSQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 SRSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKDRDEVT 249
>gi|414174616|ref|ZP_11429020.1| protein recA [Afipia broomeae ATCC 49717]
gi|410888445|gb|EKS36248.1| protein recA [Afipia broomeae ATCC 49717]
Length = 362
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 166/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S VI +GSL LD+ALG+GGLPKGR+V
Sbjct: 14 MDKTKALSAALSQIERQFGKGSVMKLGKNDRSMDIEVIPSGSLGLDIALGVGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDELLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+SHT++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 NKSHTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGQIKERDEV 248
>gi|383770750|ref|YP_005449813.1| recombinase A [Bradyrhizobium sp. S23321]
gi|381358871|dbj|BAL75701.1| recombinase A [Bradyrhizobium sp. S23321]
Length = 362
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S IS+GSL LD+ALGIGGLPKGR+V
Sbjct: 14 MDKTKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAISSGSLGLDIALGIGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASIRLDIRRIGAIKERDEV 248
>gi|75675472|ref|YP_317893.1| recombinase A [Nitrobacter winogradskyi Nb-255]
gi|123745720|sp|Q3ST50.1|RECA_NITWN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|74420342|gb|ABA04541.1| RecA protein [Nitrobacter winogradskyi Nb-255]
Length = 362
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 168/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S VIS+GSL LD+ALG+GGLPKGRIV
Sbjct: 14 MDKSKALSAALSQIERQFGKGSVMKLGKNDKSMDVEVISSGSLGLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD
Sbjct: 74 EVYGPESSGKTTLALHAVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+++DSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 248
>gi|37700516|gb|AAR00257.1| RecA [Azospirillum lipoferum]
Length = 369
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 128/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L VISTGSL LD+ALGIGGLPKGRIV
Sbjct: 14 MDKQKALDAALSQIERAFGKGSIMKLGARENLVETEVISTGSLGLDIALGIGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I +AQK GG CA++D E+ALDPS A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHAIAQAQKAGGTCAFVDAEHALDPSYARKLGVNIDELLISQPDAG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + S +R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDAMSGLHARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ L+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 194 SKSNCLVIFINQIRL--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGSIKDRDTV 248
>gi|384217676|ref|YP_005608842.1| recombinase A [Bradyrhizobium japonicum USDA 6]
gi|354956575|dbj|BAL09254.1| RecA protein [Bradyrhizobium japonicum USDA 6]
Length = 362
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 14 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 248
>gi|343131434|gb|AEL89244.1| recombinase A, partial [Ochrobactrum pecoris]
Length = 355
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 127/244 (52%), Positives = 167/244 (68%), Gaps = 3/244 (1%)
Query: 58 HDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGL 117
H + + K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGL
Sbjct: 8 HVEDNSVDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI
Sbjct: 68 PKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG+IDV+V+DSVAAL P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKI 297
K+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 188 KLTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKE 244
Query: 298 ADKV 301
D+V
Sbjct: 245 RDEV 248
>gi|312115731|ref|YP_004013327.1| recA protein [Rhodomicrobium vannielii ATCC 17100]
gi|311220860|gb|ADP72228.1| recA protein [Rhodomicrobium vannielii ATCC 17100]
Length = 378
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 166/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ +FGK S++ L + ISTGSL LD+ALGIGGLP+GR+V
Sbjct: 16 MDKQKALEAALSQIERNFGKGSVMRLGKNDKLVEVEAISTGSLGLDIALGIGGLPRGRVV 75
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTLALHVI EAQK GG C ++D E+ALDP A +G++ E L+I+QPD+
Sbjct: 76 EIFGPESSGKTTLALHVIAEAQKKGGSCGFVDAEHALDPGYARKLGVNLEELIISQPDAG 135
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDVIVVDSVAAL PK EI + + Q+R+M+QALRK+ S+
Sbjct: 136 EQALEITDTLVRSGAIDVIVVDSVAALTPKAEIEGEMGDVLPGMQARLMSQALRKLTGSI 195
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ L+IF+NQ+R K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 196 SKSNCLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRIGQIKERDEV 250
>gi|444310432|ref|ZP_21146054.1| recombinase A [Ochrobactrum intermedium M86]
gi|443486240|gb|ELT49020.1| recombinase A [Ochrobactrum intermedium M86]
Length = 361
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 248
>gi|222086163|ref|YP_002544695.1| recombinase A [Agrobacterium radiobacter K84]
gi|254790417|sp|B9JFS7.1|RECA_AGRRK RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|221723611|gb|ACM26767.1| recombinase A protein [Agrobacterium radiobacter K84]
Length = 361
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 127/240 (52%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 248
>gi|90818656|emb|CAJ32633.1| recombinase A [Ochrobactrum anthropi]
Length = 355
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 130/249 (52%), Positives = 167/249 (67%), Gaps = 13/249 (5%)
Query: 58 HDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLAL 112
H + + K AL ALSQ+ FGK S++ L + PVI TGSL LD+AL
Sbjct: 8 HVEENSVDKTKALDAALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIAL 62
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
G+GGLPKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D
Sbjct: 63 GVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDL 122
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M
Sbjct: 123 ENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLM 182
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRT 292
+QALRK+ S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 183 SQALRKLTASISRSSCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRI 239
Query: 293 RLFKIADKV 301
K D+V
Sbjct: 240 GSIKERDEV 248
>gi|398826393|ref|ZP_10584638.1| protein RecA [Bradyrhizobium sp. YR681]
gi|398221156|gb|EJN07582.1| protein RecA [Bradyrhizobium sp. YR681]
Length = 362
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 14 MDKTKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 248
>gi|398831799|ref|ZP_10589975.1| protein RecA [Phyllobacterium sp. YR531]
gi|398211501|gb|EJM98119.1| protein RecA [Phyllobacterium sp. YR531]
Length = 364
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 164/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L R + TGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERSFGKGSIMRLGRNEQVVEIETVPTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSLKERDEV 248
>gi|339018114|ref|ZP_08644256.1| DNA recombinase RecA [Acetobacter tropicalis NBRC 101654]
gi|338752779|dbj|GAA07560.1| DNA recombinase RecA [Acetobacter tropicalis NBRC 101654]
Length = 340
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 127/241 (52%), Positives = 169/241 (70%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL AL Q+ FGK S++ L G R + VI TGSL LD+ALGIGGLP+G
Sbjct: 1 MDKAKALEGALGQIERAFGKGSVMRL----GQRPREQADVIPTGSLGLDIALGIGGLPRG 56
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
R++EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A+ +G+D +NLLI+QP
Sbjct: 57 RVIEIYGPESSGKTTLALHAIAEAQKRGGTCAFIDAEHALDPGYAKKLGVDVDNLLISQP 116
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 117 DAGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 176
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +S+T++IFLNQ+R K G G E T+GGNALKFYA++RL + R K D+
Sbjct: 177 GSVSRSNTMMIFLNQIRL--KIGVMFGN-PETTTGGNALKFYASVRLDIRRVGSIKDKDE 233
Query: 301 V 301
V
Sbjct: 234 V 234
>gi|85715199|ref|ZP_01046183.1| recombinase A [Nitrobacter sp. Nb-311A]
gi|85698114|gb|EAQ35987.1| recombinase A [Nitrobacter sp. Nb-311A]
Length = 362
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 168/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S V+S+GSL LD+ALG+GGLPKGRIV
Sbjct: 14 MDKSKALSAALSQIERQFGKGSVMKLGKNDKSMDVEVVSSGSLGLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD
Sbjct: 74 EVYGPESSGKTTLALHAVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+++DSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 248
>gi|421850101|ref|ZP_16283069.1| DNA recombinase RecA [Acetobacter pasteurianus NBRC 101655]
gi|371459097|dbj|GAB28272.1| DNA recombinase RecA [Acetobacter pasteurianus NBRC 101655]
Length = 344
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 127/242 (52%), Positives = 169/242 (69%), Gaps = 10/242 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL AL Q+ FGK S++ L G R VI TGSL LD+ALGIGGLP+G
Sbjct: 4 MDKAKALEGALGQIERAFGKGSVMRL----GQRPKVEADVIPTGSLGLDIALGIGGLPRG 59
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
R+VEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDPS A+ +G+D +NLLI+QP
Sbjct: 60 RVVEIYGPESSGKTTLALHAIAEAQKRGGTCAFIDAEHALDPSYAKKLGVDVDNLLISQP 119
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 120 DTGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 179
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
++ +S+TL+IFLNQ+R K G G E T+GGNALKFY+++R+ + R K D+
Sbjct: 180 GTVARSNTLMIFLNQIRL--KIGVMFGN-PETTTGGNALKFYSSVRMDIRRIGSIKDKDE 236
Query: 301 VN 302
V
Sbjct: 237 VT 238
>gi|260758162|ref|ZP_05870510.1| recombinase A [Brucella abortus bv. 4 str. 292]
gi|260761988|ref|ZP_05874331.1| recombinase A [Brucella abortus bv. 2 str. 86/8/59]
gi|260668480|gb|EEX55420.1| recombinase A [Brucella abortus bv. 4 str. 292]
gi|260672420|gb|EEX59241.1| recombinase A [Brucella abortus bv. 2 str. 86/8/59]
Length = 420
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 73 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 132
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 133 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 192
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 193 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 252
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 253 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 307
>gi|162148079|ref|YP_001602540.1| protein recA (recombinase A) [Gluconacetobacter diazotrophicus PAl
5]
gi|161786656|emb|CAP56239.1| Protein recA (Recombinase A) [Gluconacetobacter diazotrophicus PAl
5]
Length = 381
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 128/241 (53%), Positives = 169/241 (70%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKG 120
+ K AL ALSQ+ FGK S++ L G R VISTGSL LD+ALGIGGLP+G
Sbjct: 38 IDKSKALEGALSQIERAFGKGSVMRL----GQRANEAVDVISTGSLGLDIALGIGGLPRG 93
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D +NLLI+QP
Sbjct: 94 RIVEIYGPESSGKTTLALHAIAEAQKKGGVCAFIDAEHALDPGYARKLGVDVDNLLISQP 153
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 154 DAGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 213
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
++ +S+T++IFLNQ+R K G G E T+GGNALKFYA++R+ + R K D+
Sbjct: 214 GTVSRSNTMMIFLNQIRL--KIGVMFGS-PETTTGGNALKFYASVRMDIRRIGQIKDKDE 270
Query: 301 V 301
V
Sbjct: 271 V 271
>gi|158424479|ref|YP_001525771.1| recombinase A [Azorhizobium caulinodans ORS 571]
gi|158331368|dbj|BAF88853.1| RecA protein [Azorhizobium caulinodans ORS 571]
Length = 363
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + IS+GSL LD+ALGIGGLPKGRIV
Sbjct: 14 MDKTKALDAALSQIERHFGKGSIMRLGKSGKVMEVESISSGSLGLDIALGIGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGTCAFIDAEHALDPIYARKLGVNLDDLLISQPDAG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAIDVLVVDSVAALTPRAELDGEMGDNQPGMQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R + K D+V
Sbjct: 194 SKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGMIKERDEV 248
>gi|209542693|ref|YP_002274922.1| recA protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209530370|gb|ACI50307.1| recA protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 350
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 128/241 (53%), Positives = 169/241 (70%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKG 120
+ K AL ALSQ+ FGK S++ L G R VISTGSL LD+ALGIGGLP+G
Sbjct: 7 IDKSKALEGALSQIERAFGKGSVMRL----GQRANEAVDVISTGSLGLDIALGIGGLPRG 62
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D +NLLI+QP
Sbjct: 63 RIVEIYGPESSGKTTLALHAIAEAQKKGGVCAFIDAEHALDPGYARKLGVDVDNLLISQP 122
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 123 DAGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 182
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
++ +S+T++IFLNQ+R K G G E T+GGNALKFYA++R+ + R K D+
Sbjct: 183 GTVSRSNTMMIFLNQIRL--KIGVMFGS-PETTTGGNALKFYASVRMDIRRIGQIKDKDE 239
Query: 301 V 301
V
Sbjct: 240 V 240
>gi|237815621|ref|ZP_04594618.1| recA protein [Brucella abortus str. 2308 A]
gi|237788919|gb|EEP63130.1| recA protein [Brucella abortus str. 2308 A]
Length = 424
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 77 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 136
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 137 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 196
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 197 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 256
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 257 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 311
>gi|452963778|gb|EME68836.1| recombinase A [Magnetospirillum sp. SO-1]
Length = 359
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 124/242 (51%), Positives = 168/242 (69%), Gaps = 3/242 (1%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
D M + AL A+SQ+ FGK S++ + + VISTGSL LD+ALGIGGLP+
Sbjct: 10 DKDTMDRQKALEAAVSQIERAFGKGSIMKMGQKDQVVETEVISTGSLGLDVALGIGGLPR 69
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+EIYG E+SGKTTLALHVI EAQK GG CA++D E+ALDP A +G++ + LLI+Q
Sbjct: 70 GRIIEIYGPESSGKTTLALHVIAEAQKKGGTCAFVDAEHALDPIYARKLGVNLDELLISQ 129
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 130 PDAGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDNHMGLHARLMSQALRKL 189
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
S+ +S T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D
Sbjct: 190 TGSVSKSKTIVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLEIRRVGAIKDRD 246
Query: 300 KV 301
+V
Sbjct: 247 EV 248
>gi|421604191|ref|ZP_16046428.1| recombinase A, partial [Bradyrhizobium sp. CCGE-LA001]
gi|404263701|gb|EJZ29144.1| recombinase A, partial [Bradyrhizobium sp. CCGE-LA001]
Length = 285
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDIEAVSSGSLGLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 181 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 235
>gi|225627673|ref|ZP_03785710.1| recA protein [Brucella ceti str. Cudo]
gi|225617678|gb|EEH14723.1| recA protein [Brucella ceti str. Cudo]
Length = 424
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 77 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 136
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 137 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 196
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 197 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 256
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 257 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 311
>gi|306840332|ref|ZP_07473104.1| recA protein [Brucella sp. BO2]
gi|306289731|gb|EFM60920.1| recA protein [Brucella sp. BO2]
Length = 389
Score = 236 bits (603), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 42 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 101
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 102 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 161
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 162 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 221
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 222 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 276
>gi|356561937|ref|XP_003549233.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Glycine max]
Length = 459
Score = 236 bits (603), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 136/278 (48%), Positives = 185/278 (66%), Gaps = 18/278 (6%)
Query: 24 SFSQNGRRDAITCIGMNIHSLSSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGK 83
SFS GRR + + D + + +K+ AL+ AL Q+ + FGK
Sbjct: 59 SFSSKGRRRSKS------------------DGSDSGEENMSKKELALQQALDQITSAFGK 100
Query: 84 ESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKE 143
S++ L R + PV+STGS LD+ALGIGGLPKGR+VEIYG EASGKTTLALHVI E
Sbjct: 101 GSIMWLGRSVSPKNVPVVSTGSFALDVALGIGGLPKGRVVEIYGPEASGKTTLALHVIAE 160
Query: 144 AQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIV 203
AQK GGYC ++D E+ALD +LAE++G++ NLL++QPD E LS+VDTL +SGS+DV+V
Sbjct: 161 AQKQGGYCVFVDAEHALDKTLAESIGVNTTNLLLSQPDCGEQALSLVDTLIRSGSVDVVV 220
Query: 204 VDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSG 263
VDSVAAL+PK E+ + + Q+R+M+QALRK+ ++L S T++IF+NQVR +
Sbjct: 221 VDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHALSLSQTILIFINQVRSKISTF 280
Query: 264 QGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
G EVT GGNALKFYA++RL + R K +++
Sbjct: 281 GGFSGPTEVTCGGNALKFYASVRLNIKRIGFVKKGEEI 318
>gi|163843467|ref|YP_001627871.1| recombinase A [Brucella suis ATCC 23445]
gi|189039592|sp|B0CH00.1|RECA_BRUSI RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|163674190|gb|ABY38301.1| recA protein [Brucella suis ATCC 23445]
Length = 361
Score = 236 bits (603), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 248
>gi|109254800|emb|CAK22262.1| recombinase A [Pseudochrobactrum kiredjianiae]
Length = 299
Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 124/229 (54%), Positives = 162/229 (70%), Gaps = 3/229 (1%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIVEIYG E+SG
Sbjct: 3 ALSQIERSFGKGSIMRLGQNDKVVEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTT+ALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DT
Sbjct: 63 KTTMALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T++IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSNTMVIF 182
Query: 253 LNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 INQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 228
>gi|23502079|ref|NP_698206.1| recombinase A [Brucella suis 1330]
gi|62290113|ref|YP_221906.1| recombinase A [Brucella abortus bv. 1 str. 9-941]
gi|82700036|ref|YP_414610.1| recombinase A [Brucella melitensis biovar Abortus 2308]
gi|161619157|ref|YP_001593044.1| recombinase A [Brucella canis ATCC 23365]
gi|189024351|ref|YP_001935119.1| recombinase A [Brucella abortus S19]
gi|225852698|ref|YP_002732931.1| recombinase A [Brucella melitensis ATCC 23457]
gi|229220681|ref|NP_539704.2| recombinase A [Brucella melitensis bv. 1 str. 16M]
gi|260546662|ref|ZP_05822401.1| recombinase A [Brucella abortus NCTC 8038]
gi|260565545|ref|ZP_05836029.1| recombinase A [Brucella melitensis bv. 1 str. 16M]
gi|260566268|ref|ZP_05836738.1| recombinase A [Brucella suis bv. 4 str. 40]
gi|260754946|ref|ZP_05867294.1| recombinase A [Brucella abortus bv. 6 str. 870]
gi|261214198|ref|ZP_05928479.1| recombinase A [Brucella abortus bv. 3 str. Tulya]
gi|261219550|ref|ZP_05933831.1| recombinase A [Brucella ceti M13/05/1]
gi|261314076|ref|ZP_05953273.1| recombinase [Brucella pinnipedialis M163/99/10]
gi|261317836|ref|ZP_05957033.1| recombinase A [Brucella pinnipedialis B2/94]
gi|261322045|ref|ZP_05961242.1| recombinase A [Brucella ceti M644/93/1]
gi|261752510|ref|ZP_05996219.1| recombinase A [Brucella suis bv. 5 str. 513]
gi|261755169|ref|ZP_05998878.1| recombinase A [Brucella suis bv. 3 str. 686]
gi|261758393|ref|ZP_06002102.1| recombinase A [Brucella sp. F5/99]
gi|265984260|ref|ZP_06096995.1| recombinase A [Brucella sp. 83/13]
gi|265999433|ref|ZP_05466343.2| recombinase A [Brucella melitensis bv. 2 str. 63/9]
gi|306838011|ref|ZP_07470869.1| recA protein [Brucella sp. NF 2653]
gi|306844103|ref|ZP_07476697.1| recA protein [Brucella inopinata BO1]
gi|340790820|ref|YP_004756285.1| recombinase A [Brucella pinnipedialis B2/94]
gi|376280873|ref|YP_005154879.1| recombinase A [Brucella suis VBI22]
gi|384224867|ref|YP_005616031.1| recombinase A [Brucella suis 1330]
gi|423166703|ref|ZP_17153406.1| protein recA [Brucella abortus bv. 1 str. NI435a]
gi|423170923|ref|ZP_17157598.1| protein recA [Brucella abortus bv. 1 str. NI474]
gi|423172995|ref|ZP_17159666.1| protein recA [Brucella abortus bv. 1 str. NI486]
gi|423178312|ref|ZP_17164956.1| protein recA [Brucella abortus bv. 1 str. NI488]
gi|423180353|ref|ZP_17166994.1| protein recA [Brucella abortus bv. 1 str. NI010]
gi|423183485|ref|ZP_17170122.1| protein recA [Brucella abortus bv. 1 str. NI016]
gi|423185575|ref|ZP_17172189.1| protein recA [Brucella abortus bv. 1 str. NI021]
gi|423188710|ref|ZP_17175320.1| protein recA [Brucella abortus bv. 1 str. NI259]
gi|54039031|sp|P65976.1|RECA_BRUSU RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|54041791|sp|P65975.1|RECA_BRUME RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|68067733|sp|Q04761.2|RECA_BRUAB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|123768490|sp|Q2YRU7.1|RECA_BRUA2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|189039591|sp|A9M5L8.1|RECA_BRUC2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238689380|sp|B2S648.1|RECA_BRUA1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|254790424|sp|C0RJG9.1|RECA_BRUMB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|23348037|gb|AAN30121.1| recA protein [Brucella suis 1330]
gi|62196245|gb|AAX74545.1| RecA, recA protein [Brucella abortus bv. 1 str. 9-941]
gi|82616137|emb|CAJ11180.1| RecA bacterial DNA recombination protein:ATP/GTP-binding site motif
A (P-loop):AAA ATPase [Brucella melitensis biovar
Abortus 2308]
gi|161335968|gb|ABX62273.1| recA protein [Brucella canis ATCC 23365]
gi|189019923|gb|ACD72645.1| RecA bacterial DNA recombination protein [Brucella abortus S19]
gi|225641063|gb|ACO00977.1| recA protein [Brucella melitensis ATCC 23457]
gi|260095712|gb|EEW79589.1| recombinase A [Brucella abortus NCTC 8038]
gi|260151613|gb|EEW86707.1| recombinase A [Brucella melitensis bv. 1 str. 16M]
gi|260155786|gb|EEW90866.1| recombinase A [Brucella suis bv. 4 str. 40]
gi|260675054|gb|EEX61875.1| recombinase A [Brucella abortus bv. 6 str. 870]
gi|260915805|gb|EEX82666.1| recombinase A [Brucella abortus bv. 3 str. Tulya]
gi|260924639|gb|EEX91207.1| recombinase A [Brucella ceti M13/05/1]
gi|261294735|gb|EEX98231.1| recombinase A [Brucella ceti M644/93/1]
gi|261297059|gb|EEY00556.1| recombinase A [Brucella pinnipedialis B2/94]
gi|261303102|gb|EEY06599.1| recombinase [Brucella pinnipedialis M163/99/10]
gi|261738377|gb|EEY26373.1| recombinase A [Brucella sp. F5/99]
gi|261742263|gb|EEY30189.1| recombinase A [Brucella suis bv. 5 str. 513]
gi|261744922|gb|EEY32848.1| recombinase A [Brucella suis bv. 3 str. 686]
gi|263093939|gb|EEZ17873.1| recombinase A [Brucella melitensis bv. 2 str. 63/9]
gi|264662852|gb|EEZ33113.1| recombinase A [Brucella sp. 83/13]
gi|306275546|gb|EFM57278.1| recA protein [Brucella inopinata BO1]
gi|306406935|gb|EFM63156.1| recA protein [Brucella sp. NF 2653]
gi|340559279|gb|AEK54517.1| recombinase A [Brucella pinnipedialis B2/94]
gi|343383047|gb|AEM18539.1| recombinase A [Brucella suis 1330]
gi|358258472|gb|AEU06207.1| recombinase A [Brucella suis VBI22]
gi|374539501|gb|EHR11005.1| protein recA [Brucella abortus bv. 1 str. NI474]
gi|374542934|gb|EHR14418.1| protein recA [Brucella abortus bv. 1 str. NI435a]
gi|374543550|gb|EHR15032.1| protein recA [Brucella abortus bv. 1 str. NI486]
gi|374545551|gb|EHR17012.1| protein recA [Brucella abortus bv. 1 str. NI488]
gi|374548917|gb|EHR20364.1| protein recA [Brucella abortus bv. 1 str. NI010]
gi|374549548|gb|EHR20991.1| protein recA [Brucella abortus bv. 1 str. NI016]
gi|374558368|gb|EHR29761.1| protein recA [Brucella abortus bv. 1 str. NI259]
gi|374559666|gb|EHR31051.1| protein recA [Brucella abortus bv. 1 str. NI021]
Length = 361
Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 248
>gi|148559731|ref|YP_001259122.1| recombinase A [Brucella ovis ATCC 25840]
gi|148370988|gb|ABQ60967.1| protein RecA [Brucella ovis ATCC 25840]
Length = 424
Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 77 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 136
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 137 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 196
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 197 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 256
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 257 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 311
>gi|90420927|ref|ZP_01228832.1| RecA [Aurantimonas manganoxydans SI85-9A1]
gi|90334902|gb|EAS48674.1| RecA [Aurantimonas manganoxydans SI85-9A1]
Length = 357
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/239 (52%), Positives = 164/239 (68%), Gaps = 3/239 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K+ AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR+V
Sbjct: 14 LDKNKALDAALSQIERAFGKGSIMRLGENEKIVEIETVSTGSLGLDIALGIGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EVYGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 SRSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIKDRDEVT 249
>gi|408378032|ref|ZP_11175631.1| recombinase A [Agrobacterium albertimagni AOL15]
gi|407748146|gb|EKF59663.1| recombinase A [Agrobacterium albertimagni AOL15]
Length = 362
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/240 (52%), Positives = 164/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGANESVVEVETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSKTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKDREEV 248
>gi|209964227|ref|YP_002297142.1| recombinase A [Rhodospirillum centenum SW]
gi|226723637|sp|B6IS93.1|RECA_RHOCS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|209957693|gb|ACI98329.1| RecA protein [Rhodospirillum centenum SW]
Length = 358
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 162/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL Q+ FGK S++ L ISTGSL LD+ALGIGGLP+GRIV
Sbjct: 13 MDKQKALDAALGQIERAFGKGSIMKLGAREAMAETEAISTGSLGLDIALGIGGLPRGRIV 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP+ A +G+D + LLI+QPD+
Sbjct: 73 EIYGPESSGKTTLALHAIAEAQKAGGTCAFVDAEHALDPAYARKLGVDVDELLISQPDAG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 133 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSI 192
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S L+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 193 SKSRCLVIFINQIRL--KIGVMFGN-PETTTGGNALKFYASIRLDIRRIGAIKDRDNV 247
>gi|89473563|emb|CAJ34594.1| recombinase A [Brucella abortus]
gi|89473565|emb|CAJ34595.1| recombinase A [Brucella canis]
gi|89473567|emb|CAJ34596.1| recombinase A [Brucella neotomae]
gi|89473569|emb|CAJ34597.1| recombinase A [Brucella ovis]
gi|89473571|emb|CAJ34598.1| recombinase A [Brucella suis 1330]
gi|89473573|emb|CAJ34599.1| recombinase A [Brucella pinnipedialis]
gi|89473575|emb|CAJ34600.1| recombinase A [Brucella ceti]
gi|90818664|emb|CAJ32637.1| recombinase A [Brucella melitensis]
Length = 355
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 248
>gi|404319018|ref|ZP_10966951.1| recombinase A [Ochrobactrum anthropi CTS-325]
Length = 361
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/243 (53%), Positives = 166/243 (68%), Gaps = 13/243 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLALGIGGLP 118
+ K AL ALSQ+ FGK S++ L + PVI TGSL LD+ALG+GGLP
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIALGVGGLP 68
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+
Sbjct: 69 KGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLIS 128
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK
Sbjct: 129 QPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRK 188
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 189 LTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKER 245
Query: 299 DKV 301
D+V
Sbjct: 246 DEV 248
>gi|90818668|emb|CAJ32639.1| recombinase A [Ochrobactrum tritici]
Length = 355
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/243 (53%), Positives = 166/243 (68%), Gaps = 13/243 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLALGIGGLP 118
+ K AL ALSQ+ FGK S++ L + PVI TGSL LD+ALG+GGLP
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIALGVGGLP 68
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+
Sbjct: 69 KGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLIS 128
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK
Sbjct: 129 QPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRK 188
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 189 LTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKER 245
Query: 299 DKV 301
D+V
Sbjct: 246 DEV 248
>gi|297248509|ref|ZP_06932227.1| recombinase A [Brucella abortus bv. 5 str. B3196]
gi|17982728|gb|AAL51968.1| reca protein [Brucella melitensis bv. 1 str. 16M]
gi|297175678|gb|EFH35025.1| recombinase A [Brucella abortus bv. 5 str. B3196]
Length = 378
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 31 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 90
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 91 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 150
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 151 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 210
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 211 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 265
>gi|440226825|ref|YP_007333916.1| recombination protein RecA [Rhizobium tropici CIAT 899]
gi|440038336|gb|AGB71370.1| recombination protein RecA [Rhizobium tropici CIAT 899]
Length = 361
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/240 (52%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 248
>gi|354952162|emb|CCE46008.1| RecA protein, partial [Brucella sp. 152]
Length = 329
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 7 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 66
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 67 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 126
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 127 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 186
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 187 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 241
>gi|256369626|ref|YP_003107136.1| recombinase A [Brucella microti CCM 4915]
gi|255999788|gb|ACU48187.1| recombinase A [Brucella microti CCM 4915]
Length = 361
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 248
>gi|296448224|ref|ZP_06890120.1| recA protein [Methylosinus trichosporium OB3b]
gi|296254264|gb|EFH01395.1| recA protein [Methylosinus trichosporium OB3b]
Length = 358
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/242 (51%), Positives = 167/242 (69%), Gaps = 9/242 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + + ISTGSL LD+ALG+GGLP+GR+V
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGKNQKAVEIETISTGSLGLDIALGVGGLPRGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LHVI EAQK GG CA++D E+ALDP A +G++ E LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLTLHVIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLEELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL P+ EI + + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGEVQPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRM---DEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
+S+TL+IF+NQ+R +G M E T+GGNALKFYA++RL + R K D+
Sbjct: 194 SRSNTLVIFINQIRMK------IGVMYGSPETTTGGNALKFYASVRLDIRRIGSIKDRDE 247
Query: 301 VN 302
V
Sbjct: 248 VT 249
>gi|226939722|ref|YP_002794795.1| recombinase A [Laribacter hongkongensis HLHK9]
gi|254790435|sp|C1D4J2.1|RECA_LARHH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226714648|gb|ACO73786.1| RecA [Laribacter hongkongensis HLHK9]
Length = 354
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/236 (51%), Positives = 165/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ + + VISTGSL LD+ALG+GGLP+GR+VEI
Sbjct: 6 KQKALSAALSQIEKQFGKGSIMRMNETQVNDNLQVISTGSLGLDMALGVGGLPRGRVVEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L V+ EAQKLGG CAY+D ENALDP A +G+ ++LL++QPD+ E
Sbjct: 66 YGPESSGKTTLCLQVVAEAQKLGGTCAYIDAENALDPVYAGKLGVKVDDLLVSQPDTGEQ 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG +DVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 126 ALEICDMLVRSGGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKR 185
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 186 TNTLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKKTDEI 238
>gi|153009316|ref|YP_001370531.1| recombinase A [Ochrobactrum anthropi ATCC 49188]
gi|166220662|sp|A6X0E8.1|RECA_OCHA4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|151561204|gb|ABS14702.1| recA protein [Ochrobactrum anthropi ATCC 49188]
Length = 361
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/243 (53%), Positives = 166/243 (68%), Gaps = 13/243 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLALGIGGLP 118
+ K AL ALSQ+ FGK S++ L + PVI TGSL LD+ALG+GGLP
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIALGVGGLP 68
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+
Sbjct: 69 KGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLIS 128
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK
Sbjct: 129 QPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRK 188
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 189 LTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKER 245
Query: 299 DKV 301
D+V
Sbjct: 246 DEV 248
>gi|374291978|ref|YP_005039013.1| Recombinase A (recA) [Azospirillum lipoferum 4B]
gi|384872617|sp|P62209.2|RECA_AZOL4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|357423917|emb|CBS86779.1| Recombinase A (recA) [Azospirillum lipoferum 4B]
Length = 359
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L VISTGSL LD+ALGIGGLPKGRIV
Sbjct: 14 MDKQKALDAALSQIERAFGKGSIMKLGARENLVETEVISTGSLGLDIALGIGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I +AQK GG CA++D E+ALDPS A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHAIAQAQKAGGTCAFVDAEHALDPSYARKLGVNIDELLISQPDAG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ L+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 194 SKSNCLVIFINQIRL--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGSIKDRDTV 248
>gi|443497939|dbj|BAM76762.1| recombinase A, partial [Ochrobactrum anthropi]
Length = 340
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/243 (53%), Positives = 166/243 (68%), Gaps = 13/243 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLALGIGGLP 118
+ K AL ALSQ+ FGK S++ L + PVI TGSL LD+ALG+GGLP
Sbjct: 6 VDKTKALDAALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIALGVGGLP 60
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+
Sbjct: 61 KGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLIS 120
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK
Sbjct: 121 QPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRK 180
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 181 LTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKER 237
Query: 299 DKV 301
D+V
Sbjct: 238 DEV 240
>gi|381167306|ref|ZP_09876514.1| Recombinase A (recA) [Phaeospirillum molischianum DSM 120]
gi|380683614|emb|CCG41326.1| Recombinase A (recA) [Phaeospirillum molischianum DSM 120]
Length = 359
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/242 (50%), Positives = 168/242 (69%), Gaps = 3/242 (1%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
D M + AL A+SQ+ FGK S++ L + VISTGSL LD+ALGIGG+P+
Sbjct: 10 DKDTMDRQKALEAAVSQIERAFGKGSIMKLGQKDQVVETEVISTGSLGLDVALGIGGVPR 69
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+E+YG E+SGKTTLALH+I EAQK GG CA++D E+ALDP A +G+ + LLI+Q
Sbjct: 70 GRIIEVYGPESSGKTTLALHIIAEAQKKGGACAFIDAEHALDPGYARKLGVVLDELLISQ 129
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L +VDTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 130 PDAGEQALEIVDTLVRSGAIDVLVVDSVAALVPRAELEGEMGDAHVGLHARLMSQALRKL 189
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
S+ +S T++IF+NQ+R K G G E T+GGNALKFYA++R+ + R K D
Sbjct: 190 TGSVSKSKTIVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRMEIRRVGAIKDRD 246
Query: 300 KV 301
+V
Sbjct: 247 EV 248
>gi|89143137|emb|CAJ41870.1| recombinase A [Pseudochrobactrum asaccharolyticum]
Length = 302
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/233 (53%), Positives = 163/233 (69%), Gaps = 3/233 (1%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL ALSQ+ FGK S++ L + + TGSL LD+ALG+GGLPKGRIVEIYG
Sbjct: 2 ALDAALSQIERSFGKGSIMRLGQNDKVVEIETVPTGSLSLDIALGVGGLPKGRIVEIYGP 61
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTT+ALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L
Sbjct: 62 ESSGKTTMALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALE 121
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T
Sbjct: 122 ITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSNT 181
Query: 249 LIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 182 MVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 231
>gi|258541148|ref|YP_003186581.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-01]
gi|384041069|ref|YP_005479813.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-12]
gi|384049584|ref|YP_005476647.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-03]
gi|384052694|ref|YP_005485788.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-07]
gi|384055926|ref|YP_005488593.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-22]
gi|384058567|ref|YP_005497695.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-26]
gi|384061861|ref|YP_005482503.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-32]
gi|384117937|ref|YP_005500561.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256632226|dbj|BAH98201.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-01]
gi|256635283|dbj|BAI01252.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-03]
gi|256638338|dbj|BAI04300.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-07]
gi|256641392|dbj|BAI07347.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-22]
gi|256644447|dbj|BAI10395.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-26]
gi|256647502|dbj|BAI13443.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-32]
gi|256650555|dbj|BAI16489.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256653546|dbj|BAI19473.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-12]
Length = 398
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/242 (52%), Positives = 169/242 (69%), Gaps = 10/242 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL AL Q+ FGK S++ L G R VI TGSL LD+ALGIGGLP+G
Sbjct: 58 MDKAKALEGALGQIERAFGKGSVMRL----GQRPKVEADVIPTGSLGLDIALGIGGLPRG 113
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
R+VEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDPS A+ +G+D +NLLI+QP
Sbjct: 114 RVVEIYGPESSGKTTLALHAIAEAQKRGGTCAFIDAEHALDPSYAKKLGVDVDNLLISQP 173
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 174 DTGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 233
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
++ +S+TL+IFLNQ+R K G G E T+GGNALKFY+++R+ + R K D+
Sbjct: 234 GTVARSNTLMIFLNQIRL--KIGVMFGN-PETTTGGNALKFYSSVRMDIRRIGSIKDKDE 290
Query: 301 VN 302
V
Sbjct: 291 VT 292
>gi|316932870|ref|YP_004107852.1| recA protein [Rhodopseudomonas palustris DX-1]
gi|315600584|gb|ADU43119.1| recA protein [Rhodopseudomonas palustris DX-1]
Length = 363
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + + IS+GSL LD+ALG+GGLPKGRIV
Sbjct: 15 MDKSKALSAALSQIERQFGKGSVMKLGKNDRAMEIETISSGSLGLDIALGVGGLPKGRIV 74
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD
Sbjct: 75 EIYGPESSGKTTLALHCVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHG 134
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 135 EQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 194
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 195 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 249
>gi|92117166|ref|YP_576895.1| recombinase A [Nitrobacter hamburgensis X14]
gi|123083700|sp|Q1QMW2.1|RECA_NITHX RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|91800060|gb|ABE62435.1| RecA protein [Nitrobacter hamburgensis X14]
Length = 362
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S VIS+GSL LD+ALG+GGLPKGR+V
Sbjct: 14 MDKSKALSAALSQIERQFGKGSVMKLGKNDKSMDIEVISSGSLGLDIALGVGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+ ++LLI+QPD
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPIYARKLGVKVDDLLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+++DSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 248
>gi|334353267|emb|CBZ39225.1| recombinase A [Brucella sp. F60]
gi|334353269|emb|CBZ39226.1| recombinase A [Brucella sp. F965]
Length = 328
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 4 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 64 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 124 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 183
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 184 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 238
>gi|405382935|ref|ZP_11036711.1| protein RecA [Rhizobium sp. CF142]
gi|397320696|gb|EJJ25128.1| protein RecA [Rhizobium sp. CF142]
Length = 363
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/244 (52%), Positives = 168/244 (68%), Gaps = 11/244 (4%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGL 117
K + K AL ALSQ+ FGK S++ L GS V +STGSL LD+ALGIGGL
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKL----GSNESIVEIETVSTGSLSLDIALGIGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGRI+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI
Sbjct: 68 PKGRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKI 297
K+ S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 188 KLTASISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKE 244
Query: 298 ADKV 301
++V
Sbjct: 245 REEV 248
>gi|224087995|ref|XP_002308284.1| predicted protein [Populus trichocarpa]
gi|222854260|gb|EEE91807.1| predicted protein [Populus trichocarpa]
Length = 418
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/253 (51%), Positives = 179/253 (70%), Gaps = 1/253 (0%)
Query: 54 DDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALG 113
D + + +K+ AL+ AL Q+ + FGK +++ R + PV+STGS LD+ALG
Sbjct: 46 DGSESGEENMSKKELALQQALDQITSQFGKGAIMWFGRSEAPKNVPVVSTGSFALDIALG 105
Query: 114 IGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAE 173
GG PKGR+VEI+G EASGKTTLALHVI EAQK GGYC ++D E+ALD SLA+A+G++ E
Sbjct: 106 CGGFPKGRVVEIFGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDSSLAKAIGVNTE 165
Query: 174 NLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMT 233
NLL++QPD E LS+VDTL +SGS+DV+VVDSVAAL+PK E+ + + Q+R+M+
Sbjct: 166 NLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHMAMQARLMS 225
Query: 234 QALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTR 293
QALRK+ +SL QS T+++F+NQVR + S G G EVT GGNALKFYA++RL + R
Sbjct: 226 QALRKLSHSLSQSQTILVFINQVR-AKLSTFGFGGPTEVTCGGNALKFYASVRLNIRRVG 284
Query: 294 LFKIADKVNILEV 306
K ++ +V
Sbjct: 285 FIKKGEETTGTQV 297
>gi|5103048|dbj|BAA78779.1| RecA protein [Rhodopseudomonas palustris]
Length = 363
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + + IS+GSL LD+ALG+GGLPKGRIV
Sbjct: 15 MDKSKALSAALSQIERQFGKGSVMKLGKNDRAMEIETISSGSLGLDIALGVGGLPKGRIV 74
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD
Sbjct: 75 EIYGPESSGKTTLALHCVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHG 134
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 135 EQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 194
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 195 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 249
>gi|347761691|ref|YP_004869252.1| DNA recombinase RecA [Gluconacetobacter xylinus NBRC 3288]
gi|347580661|dbj|BAK84882.1| DNA recombinase RecA [Gluconacetobacter xylinus NBRC 3288]
Length = 348
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 169/239 (70%), Gaps = 4/239 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ + S + VISTGSL LD+ALGIGGLP+GRIV
Sbjct: 7 IDKSKALEGALSQIERAFGKGSIMRMGERP-SEQVDVISTGSLGLDIALGIGGLPRGRIV 65
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH I EAQ+ GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 66 EIYGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAG 125
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 126 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSV 185
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+S+T++IFLNQ+R K G G E T+GGNALKFYA++R+ + R K D+V
Sbjct: 186 SRSNTMLIFLNQIRL--KIGVMFGS-PETTTGGNALKFYASVRMDIRRIGSIKDKDEVT 241
>gi|330993236|ref|ZP_08317172.1| Protein recA [Gluconacetobacter sp. SXCC-1]
gi|329759638|gb|EGG76146.1| Protein recA [Gluconacetobacter sp. SXCC-1]
Length = 348
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 169/239 (70%), Gaps = 4/239 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ + S + VISTGSL LD+ALGIGGLP+GRIV
Sbjct: 7 IDKSKALEGALSQIERAFGKGSIMRMGERP-SEQVDVISTGSLGLDIALGIGGLPRGRIV 65
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH I EAQ+ GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 66 EIYGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAG 125
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 126 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSV 185
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+S+T++IFLNQ+R K G G E T+GGNALKFYA++R+ + R K D+V
Sbjct: 186 SRSNTMLIFLNQIRL--KIGVMFGS-PETTTGGNALKFYASVRMDIRRIGSIKDKDEVT 241
>gi|39936912|ref|NP_949188.1| recombinase A [Rhodopseudomonas palustris CGA009]
gi|192292742|ref|YP_001993347.1| recombinase A [Rhodopseudomonas palustris TIE-1]
gi|39650769|emb|CAE29292.1| recombination protein recA [Rhodopseudomonas palustris CGA009]
gi|192286491|gb|ACF02872.1| recA protein [Rhodopseudomonas palustris TIE-1]
Length = 363
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S IS+GSL LD+ALG+GGLPKGRIV
Sbjct: 15 MDKSKALSAALSQIERQFGKGSVMRLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRIV 74
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD
Sbjct: 75 EIYGPESSGKTTLALHCVAEAQKKGGICAFVDAEHALDPVYARKLGVNVDDLLISQPDHG 134
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 135 EQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 194
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 195 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGQIKERDEV 249
>gi|430003827|emb|CCF19618.1| Recombinase A (recA) [Rhizobium sp.]
Length = 348
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 163/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKSKALDAALSQIERSFGKGSIMKLGAKENVVETETVSTGSLSLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPIYARKLGVDLENLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKEREEV 235
>gi|420244107|ref|ZP_14747942.1| protein RecA [Rhizobium sp. CF080]
gi|398056095|gb|EJL48120.1| protein RecA [Rhizobium sp. CF080]
Length = 362
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/240 (52%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KGVDKSKALEAALSQIERSFGKGSIMKLGSNENIVEIETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEREEV 248
>gi|86750850|ref|YP_487346.1| recombinase A [Rhodopseudomonas palustris HaA2]
gi|86573878|gb|ABD08435.1| RecA protein [Rhodopseudomonas palustris HaA2]
Length = 364
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S IS+GSL LD+ALG+GGLPKGR+V
Sbjct: 16 MDKTKALAAALSQIERQFGKGSVMKLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRVV 75
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH EAQK GG CA++D E+ALDP A +G++ + LLI+QPD
Sbjct: 76 EIYGPESSGKTTLALHCAAEAQKKGGICAFIDAEHALDPVYARKLGVNVDELLISQPDHG 135
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 136 EQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGDMGDALPGLQARLMSQALRKLTASI 195
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+SHT++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 196 NKSHTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGQIKERDEV 250
>gi|90818658|emb|CAJ32634.1| recombinase A [Ochrobactrum anthropi]
Length = 355
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/249 (51%), Positives = 167/249 (67%), Gaps = 13/249 (5%)
Query: 58 HDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLAL 112
H + + K AL ALSQ+ FGK S++ L + PVI TGSL LD+AL
Sbjct: 8 HVEENSVDKTKALDAALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIAL 62
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
G+GGLPKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D
Sbjct: 63 GVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDL 122
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
ENLLI+QPD+ E L + D L +SG+IDV+VVDSVAAL P+ EI + Q+R+M
Sbjct: 123 ENLLISQPDTGEQALEITDALVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLM 182
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRT 292
+QALRK+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 183 SQALRKLTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRI 239
Query: 293 RLFKIADKV 301
K D+V
Sbjct: 240 GSIKERDEV 248
>gi|144900462|emb|CAM77326.1| RecA bacterial DNA recombination protein [Magnetospirillum
gryphiswaldense MSR-1]
Length = 358
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/242 (50%), Positives = 171/242 (70%), Gaps = 4/242 (1%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
D M + AL A+SQ+ FGK S++ + + + V+STGSL LD+ALGIGGLP+
Sbjct: 10 DKDTMDRQKALEAAVSQIERAFGKGSIMKMGQKE-TVETEVVSTGSLGLDIALGIGGLPR 68
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+EIYG E+SGKTTLALHV+ EAQK GG CA++D E+ALDPS A +G++ ++LLI+Q
Sbjct: 69 GRIIEIYGPESSGKTTLALHVLAEAQKKGGTCAFIDAEHALDPSYARKLGVNLDDLLISQ 128
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 129 PDAGEQALEICDTLVRSGAVDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKL 188
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
S+ +S T++IF+NQ+R K G G E T+GGNALKFYA++R+ + R K D
Sbjct: 189 TGSVSKSKTIVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRMEIRRVGAIKDRD 245
Query: 300 KV 301
+V
Sbjct: 246 EV 247
>gi|254692312|emb|CBA10404.1| recombinase A [Agrobacterium larrymoorei]
Length = 323
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/230 (53%), Positives = 160/230 (69%), Gaps = 3/230 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
S+ +S T++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 181 SISKSKTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 227
>gi|89143139|emb|CAJ41871.1| recombinase A [Pseudochrobactrum saccharolyticum]
Length = 302
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 163/233 (69%), Gaps = 3/233 (1%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL ALSQ+ FGK S++ L + + TGSL LD+ALG+GGLPKGRIVEIYG
Sbjct: 2 ALDAALSQIERSFGKGSIMRLGQNDKVVEIETVPTGSLSLDIALGVGGLPKGRIVEIYGP 61
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTT+ALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L
Sbjct: 62 ESSGKTTMALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALE 121
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T
Sbjct: 122 ITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSNT 181
Query: 249 LIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 182 MVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEI 231
>gi|62288901|sp|Q9XBC1.3|RECA_RHOPA RecName: Full=Protein RecA; AltName: Full=Recombinase A
Length = 349
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S IS+GSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKSKALSAALSQIERQFGKGSVMRLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD
Sbjct: 61 EIYGPESSGKTTLALHCVAEAQKKGGICAFVDAEHALDPVYARKLGVNVDDLLISQPDHG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 181 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGQIKERDEV 235
>gi|357029345|ref|ZP_09091343.1| recombinase A [Mesorhizobium amorphae CCNWGS0123]
gi|355535264|gb|EHH04553.1| recombinase A [Mesorhizobium amorphae CCNWGS0123]
Length = 353
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 164/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GRIV
Sbjct: 1 MDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 181 SRSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKDRDEV 235
>gi|132236|sp|P24074.1|RECA_RHILV RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|581514|emb|CAA42578.1| RecA protein [Rhizobium leguminosarum]
Length = 351
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 163/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GRI+
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG +DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGRVDVLVVDSVAALTPRAEIEGEMGDTVPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 235
>gi|421588720|ref|ZP_16033969.1| recombinase A [Rhizobium sp. Pop5]
gi|403706515|gb|EJZ21764.1| recombinase A [Rhizobium sp. Pop5]
Length = 362
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/240 (52%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKEREEV 248
>gi|374576548|ref|ZP_09649644.1| protein RecA [Bradyrhizobium sp. WSM471]
gi|386401717|ref|ZP_10086495.1| protein RecA [Bradyrhizobium sp. WSM1253]
gi|374424869|gb|EHR04402.1| protein RecA [Bradyrhizobium sp. WSM471]
gi|385742343|gb|EIG62539.1| protein RecA [Bradyrhizobium sp. WSM1253]
Length = 362
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 166/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 14 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + E QK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVLVIDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 248
>gi|319899071|ref|YP_004159164.1| recombinase A [Bartonella clarridgeiae 73]
gi|319403035|emb|CBI76590.1| RecA protein [Bartonella clarridgeiae 73]
Length = 347
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/252 (50%), Positives = 168/252 (66%), Gaps = 10/252 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKTKALEAALSQIERSFGKGSIMRLGQKEQVVEIETVSTGSLSLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHSIAEAQKNGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNI 303
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIKDRDTV-- 235
Query: 304 LEVVNIGSMIRL 315
IGS R+
Sbjct: 236 -----IGSQTRV 242
>gi|361049809|emb|CCE21614.1| recombinase A, partial [Brucella sp. 4986/3]
Length = 348
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 1 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALR++ S+
Sbjct: 121 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRELTGSI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 181 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 235
>gi|350564305|ref|ZP_08933123.1| recA protein [Thioalkalimicrobium aerophilum AL3]
gi|349777783|gb|EGZ32145.1| recA protein [Thioalkalimicrobium aerophilum AL3]
Length = 347
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 164/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL Q+ FGK S++ + SR ISTGSL LD+ALGIGGLPKGR++EI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRMGDSTASRDIEAISTGSLGLDIALGIGGLPKGRVIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LH I EAQK GG A++D E+ALDPS AE +G+D +NLL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLHAIAEAQKKGGVAAFVDAEHALDPSYAEKLGVDVDNLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG +D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIADMLVRSGGVDIVVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K +++
Sbjct: 185 TNTLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIKKGEEI 237
>gi|45825424|gb|AAS77561.1| RecA protein [Bradyrhizobium sp. ICMP 14755]
Length = 277
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 166/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 3 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 62
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + E QK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 63 EIYGPESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 122
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 123 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 182
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 237
>gi|406925490|gb|EKD61951.1| hypothetical protein ACD_54C00009G0002 [uncultured bacterium]
Length = 355
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/243 (51%), Positives = 171/243 (70%), Gaps = 13/243 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI-----STGSLKLDLALGIGGLP 118
M K AL AL+Q+ FGK S++ L + PV+ STGSL LD+ALGIGGLP
Sbjct: 15 MDKAKALESALAQIERQFGKGSIMKL-----GQDNPVMDIEATSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRIVEIYG E+SGKTTL LHV+ EAQK GG CA++D E+ALDP A+ +G++ + LLI+
Sbjct: 70 QGRIVEIYGPESSGKTTLTLHVVAEAQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VDTL +SG++ +IVVDSVAAL+PK EI + M +Q+R+M+QA+RK
Sbjct: 130 QPDTGEQALEIVDTLVRSGAVSLIVVDSVAALVPKSEIEGDMGDMQMGSQARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K
Sbjct: 190 LTASIGRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGSIKDR 246
Query: 299 DKV 301
D+V
Sbjct: 247 DEV 249
>gi|418937705|ref|ZP_13491312.1| Protein recA [Rhizobium sp. PDO1-076]
gi|375055572|gb|EHS51813.1| Protein recA [Rhizobium sp. PDO1-076]
Length = 361
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 164/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGANESVVEVETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSKTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKDREEV 248
>gi|218463763|ref|ZP_03503854.1| recombinase A [Rhizobium etli Kim 5]
Length = 362
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 125/240 (52%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKEREEV 248
>gi|83309721|ref|YP_419985.1| recombinase A [Magnetospirillum magneticum AMB-1]
gi|123754202|sp|Q2W9P9.1|RECA_MAGSA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|82944562|dbj|BAE49426.1| RecA protein [Magnetospirillum magneticum AMB-1]
Length = 359
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/242 (49%), Positives = 168/242 (69%), Gaps = 3/242 (1%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
D M + AL A+SQ+ FGK S++ L V+STGSL LD+ALGIGG+P+
Sbjct: 10 DKDTMDRQKALEAAVSQIERAFGKGSIMKLGGKDQVVETEVVSTGSLGLDVALGIGGVPR 69
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+E+YG E+SGKTTLALH+I EAQK GG CA++D E+ALDPS A +G++ + LLI+Q
Sbjct: 70 GRIIEVYGPESSGKTTLALHIIAEAQKKGGTCAFVDAEHALDPSYARKLGVNLDELLISQ 129
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 130 PDAGEQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDNHMGLHARLMSQALRKL 189
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
S+ +S T++IF+NQ+R K G G E T+GGNALKFYA++R+ + R K D
Sbjct: 190 TGSVSKSKTIVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRMEIRRVGAIKDRD 246
Query: 300 KV 301
+V
Sbjct: 247 EV 248
>gi|241204889|ref|YP_002975985.1| recombinase A [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240858779|gb|ACS56446.1| recA protein [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 364
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 125/240 (52%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 248
>gi|424881821|ref|ZP_18305453.1| protein RecA [Rhizobium leguminosarum bv. trifolii WU95]
gi|392518184|gb|EIW42916.1| protein RecA [Rhizobium leguminosarum bv. trifolii WU95]
Length = 364
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 125/240 (52%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 248
>gi|218515602|ref|ZP_03512442.1| recombinase A [Rhizobium etli 8C-3]
Length = 297
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/228 (53%), Positives = 160/228 (70%), Gaps = 3/228 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 181 SKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 225
>gi|218675164|ref|ZP_03524833.1| recombinase A [Rhizobium etli GR56]
Length = 349
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/228 (53%), Positives = 160/228 (70%), Gaps = 3/228 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 181 SKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 225
>gi|283481769|emb|CBA10139.1| recombinase A [Agrobacterium larrymoorei]
Length = 323
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/228 (53%), Positives = 159/228 (69%), Gaps = 3/228 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+
Sbjct: 3 VDKSKALEAALSQIERSFGKGSIMKLGSNENVIEVETVSTGSLSLDIALGIGGLPKGRII 62
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 63 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 122
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 123 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 182
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
+S T++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 183 SKSKTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 227
>gi|329114759|ref|ZP_08243516.1| Protein RecA [Acetobacter pomorum DM001]
gi|326695890|gb|EGE47574.1| Protein RecA [Acetobacter pomorum DM001]
Length = 367
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/242 (52%), Positives = 168/242 (69%), Gaps = 10/242 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL AL Q+ FGK S++ L G R VI TGSL LD+ALGIGGLP+G
Sbjct: 27 MDKAKALEGALGQIERAFGKGSVMRL----GQRPKVEADVIPTGSLGLDIALGIGGLPRG 82
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
R+VEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A+ +G+D +NLLI+QP
Sbjct: 83 RVVEIYGPESSGKTTLALHAIAEAQKRGGTCAFIDAEHALDPGYAKKLGVDVDNLLISQP 142
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 143 DAGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 202
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
++ +S+TL+IFLNQ+R K G G E T+GGNALKFY+++R+ + R K D+
Sbjct: 203 GTVARSNTLMIFLNQIRL--KIGVMFGN-PETTTGGNALKFYSSVRMDIRRIGSIKDKDE 259
Query: 301 VN 302
V
Sbjct: 260 VT 261
>gi|83594151|ref|YP_427903.1| recombinase A [Rhodospirillum rubrum ATCC 11170]
gi|386350903|ref|YP_006049151.1| recombinase A [Rhodospirillum rubrum F11]
gi|123766962|sp|Q2RQH9.1|RECA_RHORT RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|83577065|gb|ABC23616.1| RecA protein [Rhodospirillum rubrum ATCC 11170]
gi|346719339|gb|AEO49354.1| recombinase A [Rhodospirillum rubrum F11]
Length = 366
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 126/247 (51%), Positives = 170/247 (68%), Gaps = 13/247 (5%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV-----ISTGSLKLDLALGI 114
D M K AL A+ Q+ FGK S++ L +RG V ISTGSL LD+ALGI
Sbjct: 10 DKDTMDKQKALEAAVGQIERAFGKGSIMKL-----GQRGSVVDIESISTGSLGLDIALGI 64
Query: 115 GGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAEN 174
GGLP+GRIVEIYG E+SGKTTLALHV+ EAQK GG CA++D E+A DP A +G+ ++
Sbjct: 65 GGLPRGRIVEIYGPESSGKTTLALHVVAEAQKKGGQCAFVDAEHAFDPLYARKLGVSLDD 124
Query: 175 LLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQ 234
LL++QPD+ E L + DTL +SG+IDV+V+DSVAAL+PK E+ + + Q+R+M+Q
Sbjct: 125 LLVSQPDTGEQALEIADTLVRSGAIDVLVIDSVAALVPKAELEGDMGDSHVGLQARLMSQ 184
Query: 235 ALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRL 294
ALRK+ ++ +S+TLIIF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 185 ALRKLTGTVSRSNTLIIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGA 241
Query: 295 FKIADKV 301
K ++V
Sbjct: 242 VKDKEEV 248
>gi|45825408|gb|AAS77553.1| RecA protein [Mesorhizobium sp. ICMP 14330]
Length = 284
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 126/240 (52%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GR
Sbjct: 1 KSVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 181 SISRSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKDRDEV 237
>gi|91976208|ref|YP_568867.1| recombinase A [Rhodopseudomonas palustris BisB5]
gi|91682664|gb|ABE38966.1| RecA protein [Rhodopseudomonas palustris BisB5]
Length = 363
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 166/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S IS+GSL LD+ALG+GGLPKGR+V
Sbjct: 15 MDKTKALTAALSQIERQFGKGSVMRLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRVV 74
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD
Sbjct: 75 EIYGPESSGKTTLALHCVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDELLISQPDHG 134
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 135 EQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 194
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 195 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGQIKERDEV 249
>gi|295810384|emb|CBL81076.1| recombinase A [Agrobacterium larrymoorei]
Length = 316
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 122/226 (53%), Positives = 158/226 (69%), Gaps = 3/226 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVIEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
S T++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 181 SKTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 223
>gi|116252383|ref|YP_768221.1| recombinase A [Rhizobium leguminosarum bv. viciae 3841]
gi|424870873|ref|ZP_18294535.1| protein RecA [Rhizobium leguminosarum bv. viciae WSM1455]
gi|122988509|sp|Q1MFZ8.1|RECA_RHIL3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|115257031|emb|CAK08125.1| putative recombinase [Rhizobium leguminosarum bv. viciae 3841]
gi|393166574|gb|EJC66621.1| protein RecA [Rhizobium leguminosarum bv. viciae WSM1455]
Length = 364
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 248
>gi|407782762|ref|ZP_11129971.1| recombinase A [Oceanibaculum indicum P24]
gi|407205058|gb|EKE75035.1| recombinase A [Oceanibaculum indicum P24]
Length = 360
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL Q+ FGK S++ L + + ISTGSL LD+ALGIGGLP+GRI+
Sbjct: 14 MDKQKALDAALGQIERAFGKGSIMKLGQRDSAVEIEAISTGSLGLDIALGIGGLPRGRII 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK+GG CA++D E+ALDP+ A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHAVAEAQKVGGTCAFVDAEHALDPTYARKLGVNVDELLISQPDAG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S ++IF+NQ+R K G G E T+GG+ALKFYA++RL + R K D+V
Sbjct: 194 SKSRCMVIFINQIRM--KIGVMFGN-PETTTGGHALKFYASVRLDIRRIGAIKDKDEV 248
>gi|71062458|gb|AAZ21461.1| recA protein [Candidatus Pelagibacter ubique HTCC1062]
Length = 358
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 123/232 (53%), Positives = 165/232 (71%), Gaps = 10/232 (4%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEIYGRE 129
A+SQ+ ++FGK S++ L G RR ISTGSL LD+ALGIGGLPKGR++E+YG E
Sbjct: 4 AMSQIIDNFGKGSVMKL----GQRRAMDVESISTGSLSLDVALGIGGLPKGRVIEVYGPE 59
Query: 130 ASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSV 189
+SGKTTLAL V+ EAQK GG CA++D E+ALDP A+ +G+D E LLI+QPD+ E L +
Sbjct: 60 SSGKTTLALQVLAEAQKAGGICAFIDAEHALDPIYAKKLGVDTEELLISQPDTGEQALEI 119
Query: 190 VDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTL 249
DTL KSGSI VIV+DSVAAL P+ EI + + QSR+M+QALRK+ S+ ++T+
Sbjct: 120 ADTLVKSGSISVIVIDSVAALTPRAEIEGEMGDHHVGLQSRLMSQALRKLTGSISSTNTM 179
Query: 250 IIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+IF+NQ+R K G G E TSGGNALKFY+++R+ + R K D++
Sbjct: 180 MIFINQIRM--KIGVMFGS-PETTSGGNALKFYSSVRMDIRRIGAIKNGDEI 228
>gi|114775363|ref|ZP_01450931.1| recombinase A [Mariprofundus ferrooxydans PV-1]
gi|114553474|gb|EAU55855.1| recombinase A [Mariprofundus ferrooxydans PV-1]
Length = 336
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 167/238 (70%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
K AL ALSQ+ FGK +++ R + PV + +GSL LD ALG+GG P+GR++
Sbjct: 4 KSKALDTALSQIERQFGKGTVM---RLGDHAKVPVSVVPSGSLALDAALGVGGYPRGRVI 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH I EAQKLGG A++D E+ALDPS AE +G+D +NLL++QPDS
Sbjct: 61 EIYGPESSGKTTMALHAIAEAQKLGGQAAFVDAEHALDPSYAERLGVDVDNLLVSQPDSG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L +VD LT+SG +D+IVVDSVAAL PK E+ + + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEIVDMLTRSGGVDIIVVDSVAALTPKAELEGDMGDSHMGLQARLMSQALRKLTGSI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T+IIF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 181 ARSNTIIIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDVRRIGAIKKGDEV 235
>gi|319405870|emb|CBI79502.1| RecA protein [Bartonella sp. AR 15-3]
Length = 347
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 128/252 (50%), Positives = 168/252 (66%), Gaps = 10/252 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + +STGSL LD+ALGIGGLPKGRI+
Sbjct: 1 MDKTKALESALSQIERSFGKGSIMRLGQKEQVVEIETVSTGSLSLDIALGIGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHSIAEAQKNGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNI 303
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIKDRDTI-- 235
Query: 304 LEVVNIGSMIRL 315
IGS R+
Sbjct: 236 -----IGSQTRV 242
>gi|13470353|ref|NP_101919.1| recombinase A [Mesorhizobium loti MAFF303099]
gi|20178054|sp|Q98NQ6.1|RECA_RHILO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|14021092|dbj|BAB47705.1| recombination protein; RecA [Mesorhizobium loti MAFF303099]
Length = 365
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/240 (52%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GR
Sbjct: 12 KAVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 192 SISRSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKDRDEV 248
>gi|337269281|ref|YP_004613336.1| recA protein [Mesorhizobium opportunistum WSM2075]
gi|433775682|ref|YP_007306149.1| protein RecA [Mesorhizobium australicum WSM2073]
gi|336029591|gb|AEH89242.1| recA protein [Mesorhizobium opportunistum WSM2075]
gi|433667697|gb|AGB46773.1| protein RecA [Mesorhizobium australicum WSM2073]
Length = 366
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/240 (52%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GR
Sbjct: 12 KAVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 192 SISRSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKDRDEV 248
>gi|295810382|emb|CBL81075.1| recombinase A [Agrobacterium larrymoorei]
Length = 319
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 122/226 (53%), Positives = 158/226 (69%), Gaps = 3/226 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVIEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
S T++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 181 SKTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 223
>gi|319784063|ref|YP_004143539.1| recA protein [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169951|gb|ADV13489.1| recA protein [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 365
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/240 (52%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GR
Sbjct: 12 KAVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 192 SISRSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKDRDEV 248
>gi|209549552|ref|YP_002281469.1| recombinase A [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|402487937|ref|ZP_10834752.1| recombinase A [Rhizobium sp. CCGE 510]
gi|424913756|ref|ZP_18337120.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM597]
gi|226723636|sp|B5ZRG2.1|RECA_RHILW RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|209535308|gb|ACI55243.1| recA protein [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|363399254|gb|AEW16333.1| recombination protein A [Rhizobium sp. CCGE 510]
gi|392849932|gb|EJB02453.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM597]
gi|401813105|gb|EJT05452.1| recombinase A [Rhizobium sp. CCGE 510]
Length = 362
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 248
>gi|207366250|emb|CAQ58020.1| recombinase A [Agrobacterium tumefaciens]
gi|207366252|emb|CAQ58021.1| recombinase A [Agrobacterium tumefaciens]
gi|207366254|emb|CAQ58022.1| recombinase A [Agrobacterium tumefaciens]
gi|207366256|emb|CAQ58023.1| recombinase A [Agrobacterium tumefaciens]
gi|207366258|emb|CAQ58024.1| recombinase A [Agrobacterium tumefaciens]
gi|207366260|emb|CAQ58025.1| recombinase A [Agrobacterium tumefaciens]
gi|207366262|emb|CAQ58026.1| recombinase A [Agrobacterium tumefaciens]
gi|207366264|emb|CAQ58027.1| recombinase A [Agrobacterium tumefaciens]
gi|207366266|emb|CAQ58028.1| recombinase A [Agrobacterium tumefaciens]
gi|207366268|emb|CAQ58029.1| recombinase A [Agrobacterium tumefaciens]
gi|207366270|emb|CAQ58030.1| recombinase A [Agrobacterium tumefaciens]
gi|207366272|emb|CAQ58031.1| recombinase A [Agrobacterium tumefaciens]
gi|207366274|emb|CAQ58032.1| recombinase A [Agrobacterium tumefaciens]
gi|207366276|emb|CAQ58033.1| recombinase A [Agrobacterium tumefaciens]
gi|444436478|gb|AGE09607.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436480|gb|AGE09608.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436482|gb|AGE09609.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436484|gb|AGE09610.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436486|gb|AGE09611.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436488|gb|AGE09612.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436490|gb|AGE09613.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436492|gb|AGE09614.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436494|gb|AGE09615.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436496|gb|AGE09616.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436498|gb|AGE09617.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436500|gb|AGE09618.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436502|gb|AGE09619.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436504|gb|AGE09620.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436506|gb|AGE09621.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436508|gb|AGE09622.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436510|gb|AGE09623.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436512|gb|AGE09624.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436514|gb|AGE09625.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436516|gb|AGE09626.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436518|gb|AGE09627.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436520|gb|AGE09628.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436522|gb|AGE09629.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436524|gb|AGE09630.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436526|gb|AGE09631.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436528|gb|AGE09632.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436530|gb|AGE09633.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436532|gb|AGE09634.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436534|gb|AGE09635.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436536|gb|AGE09636.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436538|gb|AGE09637.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436540|gb|AGE09638.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436542|gb|AGE09639.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436544|gb|AGE09640.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436546|gb|AGE09641.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436548|gb|AGE09642.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436550|gb|AGE09643.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436552|gb|AGE09644.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436554|gb|AGE09645.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436556|gb|AGE09646.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436560|gb|AGE09648.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436562|gb|AGE09649.1| recombinase A, partial [Agrobacterium tumefaciens]
Length = 323
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/240 (52%), Positives = 163/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETISTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 237
>gi|444436558|gb|AGE09647.1| recombinase A, partial [Agrobacterium tumefaciens]
Length = 323
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/240 (52%), Positives = 163/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETISTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 237
>gi|88813101|ref|ZP_01128342.1| recA protein [Nitrococcus mobilis Nb-231]
gi|88789585|gb|EAR20711.1| recA protein [Nitrococcus mobilis Nb-231]
Length = 351
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 163/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL LAL Q+ FGK +++ + R PVISTGSL LD+ALGIGGLP+GR+VEI
Sbjct: 7 RKKALNLALGQIEKQFGKGTVMRMGDMQAVRDVPVISTGSLSLDIALGIGGLPRGRVVEI 66
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L I EAQK GG A++D E+ALDP A+ +G+D LL++QPD+ E
Sbjct: 67 YGPESSGKTTLTLQTIAEAQKAGGIAAFVDAEHALDPDYAQKLGVDINELLLSQPDTGEQ 126
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D+IVVDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 127 ALEITDMLVRSGAVDIIVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 186
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
SH+L+IF+NQ+R K G G E T+GGNALKFY+++RL + R K D++
Sbjct: 187 SHSLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRIGAIKKGDEI 239
>gi|424887837|ref|ZP_18311440.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM2012]
gi|393173386|gb|EJC73430.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM2012]
Length = 362
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 248
>gi|424895240|ref|ZP_18318814.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM2297]
gi|393179467|gb|EJC79506.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM2297]
Length = 362
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 248
>gi|45825420|gb|AAS77559.1| RecA protein [Bradyrhizobium sp. ICMP 12835]
Length = 277
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 166/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 3 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 62
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + E QK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 63 EIYGPESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 122
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 123 EQALEICDTLVRSGAVDVLVIDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 182
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 237
>gi|349686592|ref|ZP_08897734.1| DNA recombinase RecA [Gluconacetobacter oboediens 174Bp2]
Length = 348
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 169/239 (70%), Gaps = 4/239 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ + + + VISTGSL LD+ALGIGGLP+GRI+
Sbjct: 7 IDKSKALEGALSQIERAFGKGSIMRMGERP-TEQVDVISTGSLGLDIALGIGGLPRGRII 65
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH I EAQ+ GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 66 EIYGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAG 125
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 126 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSV 185
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+S+T++IFLNQ+R K G G E T+GGNALKFYA++R+ + R K D+V
Sbjct: 186 SRSNTMLIFLNQIRL--KIGVMFGS-PETTTGGNALKFYASVRMDIRRIGSIKDKDEVT 241
>gi|374087442|gb|AEY82524.1| RecA [Rhizobium sp. LPU83]
Length = 361
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 125/240 (52%), Positives = 164/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNESVVEIETVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSKTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 248
>gi|148887229|emb|CAM12781.1| recombinase A [Ochrobactrum anthropi]
Length = 299
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 124/229 (54%), Positives = 162/229 (70%), Gaps = 3/229 (1%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + S +STGSL LD+ALG+GGLPKGRIVEIYG E+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDHSIEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG+IDV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+ ++IF
Sbjct: 123 LVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNCMVIF 182
Query: 253 LNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 INQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 228
>gi|378826124|ref|YP_005188856.1| recombinase A [Sinorhizobium fredii HH103]
gi|365179176|emb|CCE96031.1| RecA protein [Sinorhizobium fredii HH103]
Length = 361
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 128/244 (52%), Positives = 168/244 (68%), Gaps = 11/244 (4%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGL 117
K + K AL ALSQ+ FGK S++ L GS+ + +STGSL LD+ALGIGGL
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKL----GSKDSVIEIETVSTGSLGLDIALGIGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGRIVEIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI
Sbjct: 68 PKGRIVEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPIYARKLGVDLENLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKI 297
K+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 188 KLTASISKSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKE 244
Query: 298 ADKV 301
++V
Sbjct: 245 REEV 248
>gi|338707127|ref|YP_004661328.1| recA protein [Zymomonas mobilis subsp. pomaceae ATCC 29192]
gi|336293931|gb|AEI37038.1| recA protein [Zymomonas mobilis subsp. pomaceae ATCC 29192]
Length = 355
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 126/241 (52%), Positives = 169/241 (70%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M K AL AL+Q+ FGK S++ L GSR IS+GSL LD+ALGIGGLP+G
Sbjct: 16 MDKQKALDAALAQIDRAFGKGSVMRL----GSREKIEIDTISSGSLGLDIALGIGGLPRG 71
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G++ E+L+++QP
Sbjct: 72 RIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPIYAKKLGVNTEDLIVSQP 131
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +S ++D++V+DSVAAL P+ EI + + Q+R+M+QALRKI
Sbjct: 132 DTGEQALEITDTLIRSNAVDILVIDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKIT 191
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +SHTL+IF+NQVR K G G E T+GGNALKFYA++RL + RT K D+
Sbjct: 192 GSINRSHTLVIFINQVRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRTGQIKDRDE 248
Query: 301 V 301
+
Sbjct: 249 I 249
>gi|121602844|ref|YP_989026.1| recombinase A [Bartonella bacilliformis KC583]
gi|421760829|ref|ZP_16197643.1| recombinase A [Bartonella bacilliformis INS]
gi|166199600|sp|A1USS3.1|RECA_BARBK RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|120615021|gb|ABM45622.1| protein RecA [Bartonella bacilliformis KC583]
gi|411174597|gb|EKS44629.1| recombinase A [Bartonella bacilliformis INS]
Length = 347
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 121/228 (53%), Positives = 162/228 (71%), Gaps = 3/228 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + G ISTGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKKKALDAALSQIERSFGKGSIMRLGQKEGVVEIETISTGSLSLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL ++QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFVDAEHALDPIYARKLGVDLENLFVSQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI ++ Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMSDSLPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 225
>gi|254502491|ref|ZP_05114642.1| protein RecA [Labrenzia alexandrii DFL-11]
gi|222438562|gb|EEE45241.1| protein RecA [Labrenzia alexandrii DFL-11]
Length = 355
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/243 (52%), Positives = 166/243 (68%), Gaps = 14/243 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI-----STGSLKLDLALGIGGLP 118
M K AL ALSQ+ FGK S++ + + G V+ STGSL LD+ALGIGGLP
Sbjct: 14 MDKTKALDAALSQIERAFGKGSIMRMGQ------GQVVEVQSVSTGSLGLDIALGIGGLP 67
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRIVEIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D +NLLI+
Sbjct: 68 KGRIVEIYGPESSGKTTLALHTVAEAQKTGGICAFIDAEHALDPIYARKLGVDIDNLLIS 127
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+IDV+V+DSVAAL PK E+ + Q+R+M+QALRK
Sbjct: 128 QPDAGEQALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGMQARLMSQALRK 187
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 188 LTASISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIKDK 244
Query: 299 DKV 301
D+V
Sbjct: 245 DEV 247
>gi|319407396|emb|CBI81047.1| RecA protein [Bartonella sp. 1-1C]
Length = 347
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/252 (50%), Positives = 168/252 (66%), Gaps = 10/252 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKTKALEAALSQIERSFGKGSIMRLGQKEQVVEIETVSTGSLSLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHSIAEAQKNGGVCAFVDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNI 303
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIKDRDTI-- 235
Query: 304 LEVVNIGSMIRL 315
IGS R+
Sbjct: 236 -----IGSQTRV 242
>gi|288958054|ref|YP_003448395.1| recombination protein [Azospirillum sp. B510]
gi|288910362|dbj|BAI71851.1| recombination protein [Azospirillum sp. B510]
Length = 359
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L V+STGSL LD+ALGIGGLP+GRIV
Sbjct: 14 MDKQKALDAALSQIERAFGKGSIMKLGARENLVETEVVSTGSLGLDIALGIGGLPRGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I +AQK GG CA++D E+ALDPS A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHAIAQAQKNGGTCAFVDAEHALDPSYARKLGVNIDELLISQPDAG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ L+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 194 AKSNCLVIFINQIRL--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGSIKDRDTV 248
>gi|190892009|ref|YP_001978551.1| recombinase A [Rhizobium etli CIAT 652]
gi|417105487|ref|ZP_11961728.1| recombinase A protein [Rhizobium etli CNPAF512]
gi|238692491|sp|B3PPU4.1|RECA_RHIE6 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|190697288|gb|ACE91373.1| recombinase A protein [Rhizobium etli CIAT 652]
gi|327190520|gb|EGE57614.1| recombinase A protein [Rhizobium etli CNPAF512]
Length = 362
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 122/230 (53%), Positives = 161/230 (70%), Gaps = 3/230 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 238
>gi|1172888|sp|P24543.2|RECA_RHIET RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|683661|emb|CAA44346.1| RecA [Rhizobium phaseoli]
Length = 361
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 122/230 (53%), Positives = 161/230 (70%), Gaps = 3/230 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 238
>gi|421852716|ref|ZP_16285401.1| DNA recombinase RecA [Acetobacter pasteurianus subsp. pasteurianus
LMG 1262 = NBRC 106471]
gi|371479047|dbj|GAB30604.1| DNA recombinase RecA [Acetobacter pasteurianus subsp. pasteurianus
LMG 1262 = NBRC 106471]
Length = 344
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 126/242 (52%), Positives = 168/242 (69%), Gaps = 10/242 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL AL Q+ FGK S++ L G R VI TGSL LD+ALGIGGLP+G
Sbjct: 4 MDKAKALEGALGQIERAFGKGSVMRL----GQRPKVEADVIPTGSLGLDIALGIGGLPRG 59
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
R+VEIYG E+SGKTTLALH I EAQK G CA++D E+ALDPS A+ +G+D +NLLI+QP
Sbjct: 60 RVVEIYGPESSGKTTLALHAIAEAQKRDGTCAFIDAEHALDPSYAKKLGVDVDNLLISQP 119
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 120 DTGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 179
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
++ +S+TL+IFLNQ+R K G G E T+GGNALKFY+++R+ + R K D+
Sbjct: 180 GTVARSNTLMIFLNQIRL--KIGVMFGN-PETTTGGNALKFYSSVRMDIRRIGSIKDKDE 236
Query: 301 VN 302
V
Sbjct: 237 VT 238
>gi|409437565|ref|ZP_11264674.1| Recombinase A (recA) [Rhizobium mesoamericanum STM3625]
gi|358029543|emb|CCA94648.1| recombinase A [Rhizobium sp. STM 3625]
gi|408750601|emb|CCM75832.1| Recombinase A (recA) [Rhizobium mesoamericanum STM3625]
Length = 362
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDNLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 248
>gi|325293276|ref|YP_004279140.1| recombinase A [Agrobacterium sp. H13-3]
gi|418408608|ref|ZP_12981924.1| recombinase A [Agrobacterium tumefaciens 5A]
gi|325061129|gb|ADY64820.1| recombinase A [Agrobacterium sp. H13-3]
gi|358005522|gb|EHJ97848.1| recombinase A [Agrobacterium tumefaciens 5A]
gi|444299298|emb|CCP29598.1| recombinase A [Agrobacterium genomosp. 1]
Length = 363
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 125/240 (52%), Positives = 163/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETISTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 248
>gi|227822194|ref|YP_002826165.1| recombinase A [Sinorhizobium fredii NGR234]
gi|254790442|sp|C3MD93.1|RECA_RHISN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|227341194|gb|ACP25412.1| RecA protein [Sinorhizobium fredii NGR234]
Length = 361
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 127/244 (52%), Positives = 168/244 (68%), Gaps = 11/244 (4%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGL 117
K + K AL ALSQ+ FGK S++ L GS+ + +STGSL LD+ALGIGGL
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKL----GSKDSVIEIETVSTGSLGLDIALGIGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGRI+EIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI
Sbjct: 68 PKGRIIEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKI 297
K+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 188 KLTASISKSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKE 244
Query: 298 ADKV 301
++V
Sbjct: 245 REEV 248
>gi|67906614|gb|AAY82716.1| predicted recombination protein RecA [uncultured bacterium]
Length = 370
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 125/240 (52%), Positives = 167/240 (69%), Gaps = 10/240 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
+K+ AL A+SQ+ ++FGK S++ L G ++ I TGSL LDLALGIGG PKGR
Sbjct: 21 EKNKALDAAISQITDNFGKGSVMKL----GQKKAMDIESIFTGSLSLDLALGIGGFPKGR 76
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL V+ EAQK GG CA++D E+ALDP A+ +G++ E LLI+QPD
Sbjct: 77 IVEIYGPESSGKTTLALQVVAEAQKSGGICAFVDAEHALDPVYAKKLGVNTEELLISQPD 136
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL KSGSI VIV+DSVAAL P+ EI + + QSR+M+QALRK+
Sbjct: 137 AGEQALEIADTLVKSGSISVIVIDSVAALTPRAEIEGDMGDHHVGLQSRLMSQALRKLTS 196
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++T++IF+NQ+R K G G E TSGGNALKFY+++R+ + R K D +
Sbjct: 197 SISNTNTMMIFINQIRM--KIGVMFGS-PETTSGGNALKFYSSVRMDIRRIGAIKDKDAI 253
>gi|349699591|ref|ZP_08901220.1| DNA recombinase RecA [Gluconacetobacter europaeus LMG 18494]
Length = 348
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 169/239 (70%), Gaps = 4/239 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ + + + VISTGSL LD+ALGIGGLP+GRI+
Sbjct: 7 IDKSKALEGALSQIERAFGKGSIMRMGERP-TEQVDVISTGSLGLDIALGIGGLPRGRII 65
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH I EAQ+ GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 66 EIYGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAG 125
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 126 EQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSV 185
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+S+T++IFLNQ+R K G G E T+GGNALKFYA++R+ + R K D+V
Sbjct: 186 SRSNTMLIFLNQIRL--KIGVMFGS-PETTTGGNALKFYASVRMDIRRIGSIKDKDEVT 241
>gi|132237|sp|P27865.1|RECA_RHIME RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|581521|emb|CAA42580.1| RecA protein [Sinorhizobium meliloti]
Length = 348
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 163/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+ID++V+DSVAAL+P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAIDILVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SKSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKEREEV 235
>gi|398353909|ref|YP_006399373.1| protein RecA [Sinorhizobium fredii USDA 257]
gi|390129235|gb|AFL52616.1| protein RecA [Sinorhizobium fredii USDA 257]
Length = 361
Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 127/244 (52%), Positives = 168/244 (68%), Gaps = 11/244 (4%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGL 117
K + K AL ALSQ+ FGK S++ L GS+ V +STGSL LD+ALGIGGL
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKL----GSKDSVVEIETVSTGSLGLDIALGIGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGR++EIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI
Sbjct: 68 PKGRVIEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPIYARKLGVDLENLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKI 297
K+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 188 KLTASISKSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKE 244
Query: 298 ADKV 301
++V
Sbjct: 245 REEV 248
>gi|347446582|dbj|BAK82133.1| recombination protein RecA [Calyptogena fossajaponica symbiont]
Length = 344
Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 167/237 (70%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
QK AL+ AL+Q+ FGK S++ L V+STGSL LD+ALGIGGLP+GR+VE
Sbjct: 4 QKKQALKAALAQIDKQFGKGSVIFLGDDQAQSDIEVVSTGSLSLDIALGIGGLPRGRVVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LHVI E QKLGG A++D E+ALDP A+ +G++ ++LLI+QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHVIAEVQKLGGIAAFIDAEHALDPKYAKCLGVNTDDLLISQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SGS+D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEITDMLVRSGSVDIVVIDSVAALTPKAEIEGEMGASHMGLQARLMSQALRKLTSNIK 183
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+++T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 RTNTMVIFINQLRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKKGDEI 237
>gi|207366314|emb|CAQ58052.1| recombinase A [Agrobacterium tumefaciens]
gi|207366316|emb|CAQ58053.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 163/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 237
>gi|114328048|ref|YP_745205.1| recombinase A [Granulibacter bethesdensis CGDNIH1]
gi|84620800|gb|ABC59514.1| RecA [Granulibacter bethesdensis CGDNIH1]
gi|114316222|gb|ABI62282.1| recA protein [Granulibacter bethesdensis CGDNIH1]
Length = 351
Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 168/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M+K+ AL AL+Q+ FGK S++ + + + VI +GSL LDLALGIGG+P+GRIV
Sbjct: 7 MEKNKALDAALAQIERSFGKGSIMRMGARNVAEQIEVIPSGSLGLDLALGIGGMPRGRIV 66
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 67 EIYGPESSGKTTLALHTVAEAQKRGGTCAFVDAEHALDPIYARKLGVDVDNLLISQPDAG 126
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 127 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSV 186
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T +IFLNQ+R K G G E T+GGNALKFYA++R + R K ++V
Sbjct: 187 NRSNTTLIFLNQIRM--KIGVMFGS-PETTTGGNALKFYASVRFDIRRIGQLKDKEEV 241
>gi|46200836|ref|ZP_00056375.2| COG0468: RecA/RadA recombinase [Magnetospirillum magnetotacticum
MS-1]
Length = 351
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 120/242 (49%), Positives = 167/242 (69%), Gaps = 3/242 (1%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
D M + AL A+SQ+ FGK S++ L V+STGSL LD+ALGIGG+P+
Sbjct: 2 DKDTMDRQKALEAAVSQIERAFGKGSIMKLGGKDQVVETEVVSTGSLGLDVALGIGGVPR 61
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+E+YG E+SGKTTLALH+I EAQK GG CA++D E+ALDPS A +G+ + LLI+Q
Sbjct: 62 GRIIEVYGPESSGKTTLALHIIAEAQKKGGTCAFVDAEHALDPSYARKLGVALDELLISQ 121
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 122 PDAGEQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDNHMGLHARLMSQALRKL 181
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
S+ +S T++IF+NQ+R K G G E T+GGNALKFYA++R+ + R K D
Sbjct: 182 TGSVSKSKTIVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRMEIRRVGAIKDRD 238
Query: 300 KV 301
+V
Sbjct: 239 EV 240
>gi|150396733|ref|YP_001327200.1| recombinase A [Sinorhizobium medicae WSM419]
gi|166220683|sp|A6U9N5.1|RECA_SINMW RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|150028248|gb|ABR60365.1| recA protein [Sinorhizobium medicae WSM419]
Length = 361
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 126/240 (52%), Positives = 164/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERAFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPIYARKLGVDLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKEREEV 248
>gi|115523612|ref|YP_780523.1| recombinase A [Rhodopseudomonas palustris BisA53]
gi|115517559|gb|ABJ05543.1| RecA protein [Rhodopseudomonas palustris BisA53]
Length = 362
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S ISTGSL LD+ALG+GGLPKGR+V
Sbjct: 14 MDKSKALAAALSQIERQFGKGSVMRLGKNDRSMDVETISTGSLGLDIALGVGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH EAQK GG CA++D E+ALDP A +G++ + LLI+QPD
Sbjct: 74 EIYGPESSGKTTLALHCAAEAQKKGGICAFIDAEHALDPIYARKLGVNVDELLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGQIKERDEV 248
>gi|444299276|emb|CCP29587.1| recombinase A, partial [Agrobacterium genomosp. 1]
Length = 322
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 162/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 2 VDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETISTGSLSLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 182 SKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 236
>gi|418403219|ref|ZP_12976714.1| recombinase A [Sinorhizobium meliloti CCNWSX0020]
gi|359502831|gb|EHK75398.1| recombinase A [Sinorhizobium meliloti CCNWSX0020]
Length = 361
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 164/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+ID++V+DSVAAL+P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDILVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKEREEV 248
>gi|330813880|ref|YP_004358119.1| recombinase A [Candidatus Pelagibacter sp. IMCC9063]
gi|327486975|gb|AEA81380.1| RecA protein [Candidatus Pelagibacter sp. IMCC9063]
Length = 376
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 128/250 (51%), Positives = 175/250 (70%), Gaps = 12/250 (4%)
Query: 55 DEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLA 111
+E H D K QK +L A+SQ+ ++FGK S++ L G R+ ISTGSL LD+A
Sbjct: 12 NEAHTDDKERQK--SLDAAISQIDSNFGKGSVMKL----GQRQVMDIESISTGSLSLDIA 65
Query: 112 LGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGID 171
LGIGGLPK RIVEIYG E+SGKTTLAL VI EAQK GG CA++D E+ALDPS A+ +G++
Sbjct: 66 LGIGGLPKSRIVEIYGPESSGKTTLALQVIAEAQKSGGTCAFIDAEHALDPSYAKKLGVN 125
Query: 172 AENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRI 231
+LLI+QPD+ E L + DTL +SG+I V+VVDSVAAL P+ E+ + + Q+R+
Sbjct: 126 TTDLLISQPDTGEQALEITDTLVRSGAISVLVVDSVAALTPRAELEGEMGDHHMGLQARL 185
Query: 232 MTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
M+QALRK+ S+ +S+T++IF+NQ+R K G G E T+GGNALKFY+++RL + R
Sbjct: 186 MSQALRKLTGSISKSNTMVIFINQIRM--KIGVMFGS-PETTAGGNALKFYSSVRLDIRR 242
Query: 292 TRLFKIADKV 301
K D++
Sbjct: 243 IGAIKDGDEI 252
>gi|399042548|ref|ZP_10737258.1| protein RecA [Rhizobium sp. CF122]
gi|398058991|gb|EJL50859.1| protein RecA [Rhizobium sp. CF122]
Length = 362
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 122/230 (53%), Positives = 161/230 (70%), Gaps = 3/230 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDNLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 238
>gi|427431120|ref|ZP_18920760.1| RecA protein [Caenispirillum salinarum AK4]
gi|425877952|gb|EKV26675.1| RecA protein [Caenispirillum salinarum AK4]
Length = 362
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL A+SQ+ FGK S++ L + ISTGSL LDLALGIGGLPKGRI+
Sbjct: 14 MDKQKALDAAVSQIERAFGKGSIMRLGQRETVIDVEAISTGSLGLDLALGIGGLPKGRII 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTTLALHV+ EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EVYGPESSGKTTLALHVVAEAQKKGGACAFVDAEHALDPVYARKLGVNLDELLISQPDAG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL+P+ E+ + + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKLTGSV 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S T++IF+NQ+R K G G E T+GGNALKFY+++R+ + R K D+V
Sbjct: 194 SRSKTMVIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRMEIRRIGAIKDRDEV 248
>gi|359790738|ref|ZP_09293620.1| recombinase A [Mesorhizobium alhagi CCNWXJ12-2]
gi|359253328|gb|EHK56478.1| recombinase A [Mesorhizobium alhagi CCNWXJ12-2]
Length = 362
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GR
Sbjct: 12 KSVDKSKALDAALSQIERAFGKGSIMRLGANEKIVEIETVPTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEICDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 192 SISRSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKDRDEV 248
>gi|294013267|ref|YP_003546727.1| recombination protein RecA [Sphingobium japonicum UT26S]
gi|390165991|ref|ZP_10218264.1| recombinase A [Sphingobium indicum B90A]
gi|292676597|dbj|BAI98115.1| recombination protein RecA [Sphingobium japonicum UT26S]
gi|389591150|gb|EIM69125.1| recombinase A [Sphingobium indicum B90A]
Length = 357
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 129/244 (52%), Positives = 170/244 (69%), Gaps = 12/244 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M + AL ALSQ+ FGK S + L GSR ISTGSL LD+ALGIGGLP+G
Sbjct: 16 MDRQKALEAALSQIDRAFGKGSAMKL----GSREKIEIEAISTGSLGLDIALGIGGLPRG 71
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G+D + L+++QP
Sbjct: 72 RIVEIYGPESSGKTTLALHAIAEAQKAGGIAAFVDAEHALDPGYAKKLGVDIDELIVSQP 131
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L +VDTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 132 DTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLT 191
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +S L+IF+NQVR K G G E T+GGNALKFYA++RL + RT +I D+
Sbjct: 192 GSISRSRCLVIFINQVRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRT--GQIKDR 246
Query: 301 VNIL 304
+I+
Sbjct: 247 EDIV 250
>gi|110633616|ref|YP_673824.1| recombinase A [Chelativorans sp. BNC1]
gi|123058023|sp|Q11IW6.1|RECA_MESSB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|110284600|gb|ABG62659.1| RecA protein [Chelativorans sp. BNC1]
Length = 360
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 122/228 (53%), Positives = 160/228 (70%), Gaps = 3/228 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GRI+
Sbjct: 14 VDKSKALDAALSQIERAFGKGSIMRLGANDKVVEIETISTGSLGLDIALGVGGLPRGRII 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DVIVVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVIVVDSVAALTPRAEIEGEMGESLPGMQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 194 SRSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 238
>gi|222148885|ref|YP_002549842.1| recombinase A [Agrobacterium vitis S4]
gi|254790418|sp|B9JX56.1|RECA_AGRVS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|221735871|gb|ACM36834.1| RecA protein [Agrobacterium vitis S4]
Length = 362
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/230 (53%), Positives = 160/230 (69%), Gaps = 3/230 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KTVDKSKALEAALSQIERSFGKGSIMKLGANEKIVEVETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGVCAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+V+DSVAAL PK EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDVLVIDSVAALTPKAEIEGEMGDSLPGMQARLMSQALRKLTG 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
S+ +S+ +++F+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 192 SISRSNCMVVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 238
>gi|371782151|emb|CCE46142.1| recombinase A, partial [Rhizobium undicola]
Length = 253
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/226 (53%), Positives = 159/226 (70%), Gaps = 3/226 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ +FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERNFGKGSIMKLGANEKVVEIDTVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASISR 180
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 181 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 223
>gi|392382934|ref|YP_005032131.1| recombinase A (recA) [Azospirillum brasilense Sp245]
gi|356877899|emb|CCC98755.1| recombinase A (recA) [Azospirillum brasilense Sp245]
Length = 359
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/233 (51%), Positives = 164/233 (70%), Gaps = 3/233 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL+Q+ FGK S++ L + V+STGSL LD+ALGIGGLP+GRI+
Sbjct: 14 MDKQKALDAALAQIERAFGKGSIMKLGARENTVETEVVSTGSLGLDIALGIGGLPRGRII 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I +AQK GG CA++D E+ALDPS A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHAIAQAQKGGGTCAFVDAEHALDPSYARKLGVNVDELLISQPDAG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+S+ L+IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 194 AKSNCLVIFINQIRL--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIK 243
>gi|146424893|emb|CAM12555.1| recombinase A [Ochrobactrum anthropi]
gi|146424973|emb|CAM12595.1| recombinase A [Ochrobactrum anthropi]
gi|148887245|emb|CAM12789.1| recombinase A [Ochrobactrum intermedium]
gi|148897667|emb|CAM18487.1| recombinase A [Ochrobactrum intermedium]
gi|148897669|emb|CAM18488.1| recombinase A [Ochrobactrum intermedium]
gi|148897671|emb|CAM18489.1| recombinase A [Ochrobactrum intermedium]
gi|148897673|emb|CAM18490.1| recombinase A [Ochrobactrum intermedium]
gi|148897675|emb|CAM18491.1| recombinase A [Ochrobactrum intermedium]
gi|148897677|emb|CAM18492.1| recombinase A [Ochrobactrum intermedium]
gi|148897681|emb|CAM18494.1| recombinase A [Ochrobactrum intermedium]
gi|148897683|emb|CAM18495.1| recombinase A [Ochrobactrum intermedium]
gi|148897685|emb|CAM18496.1| recombinase A [Ochrobactrum intermedium]
gi|148897687|emb|CAM18497.1| recombinase A [Ochrobactrum intermedium]
gi|148897689|emb|CAM18498.1| recombinase A [Ochrobactrum intermedium]
gi|148897691|emb|CAM18499.1| recombinase A [Ochrobactrum intermedium]
gi|148897693|emb|CAM18500.1| recombinase A [Ochrobactrum intermedium]
Length = 299
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/229 (54%), Positives = 161/229 (70%), Gaps = 3/229 (1%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIVEIYG E+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+ ++IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNCMVIF 182
Query: 253 LNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 INQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 228
>gi|224825851|ref|ZP_03698955.1| recA protein [Pseudogulbenkiania ferrooxidans 2002]
gi|224602075|gb|EEG08254.1| recA protein [Pseudogulbenkiania ferrooxidans 2002]
Length = 351
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/236 (51%), Positives = 166/236 (70%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL+Q+ FGK S++ + + VISTGSL LDLALG+GGLP+GR+VEI
Sbjct: 8 KSRALAAALAQIEKQFGKGSIMRMSDNQITENLQVISTGSLGLDLALGVGGLPRGRVVEI 67
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L V+ EAQKLGG CAY+D ENALDP+ A+ +G++ E+LLI+QPD+ E
Sbjct: 68 YGPESSGKTTLCLQVVAEAQKLGGTCAYIDAENALDPTYAQKLGVNVEDLLISQPDTGEQ 127
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +S +DVIVVDSVAAL+PK EI + + +R+M+QALRK+ ++ +
Sbjct: 128 ALEICDMLVRSSGVDVIVVDSVAALVPKAEIEGEMGDNHVGLHARLMSQALRKLTGNIKR 187
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K +++
Sbjct: 188 TNTLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGGIKKGEEI 240
>gi|417859682|ref|ZP_12504738.1| recombinase A [Agrobacterium tumefaciens F2]
gi|338822746|gb|EGP56714.1| recombinase A [Agrobacterium tumefaciens F2]
Length = 363
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 163/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 248
>gi|255546127|ref|XP_002514123.1| DNA repair protein reca, putative [Ricinus communis]
gi|223546579|gb|EEF48077.1| DNA repair protein reca, putative [Ricinus communis]
Length = 380
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/246 (52%), Positives = 176/246 (71%), Gaps = 7/246 (2%)
Query: 70 LRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGRE 129
++L + + + +GK +++ R + PV+STGS LD+ALG GGLPKGR+VEIYG E
Sbjct: 22 IKLQVHXITSAYGKGAIMWFGRSIAPKDVPVVSTGSFALDVALGTGGLPKGRVVEIYGPE 81
Query: 130 ASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSV 189
ASGKTTLALHVI EAQK GGYC ++D E+ALD SLA+++G++ ENLL++QPD E LS+
Sbjct: 82 ASGKTTLALHVIAEAQKQGGYCVFVDAEHALDSSLAQSIGVNTENLLLSQPDCGEQALSL 141
Query: 190 VDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTL 249
VDTL +SGS+DV+VVDSVAAL+PK E+ + + Q+R+M+QALRK+ +SL QS T+
Sbjct: 142 VDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSQSETV 201
Query: 250 IIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNILEVVNI 309
+IF+NQVR + G G EVT GGNALKFYA++RL + R L K ++ I
Sbjct: 202 LIFINQVRAKLSTFGGFGGPQEVTCGGNALKFYASVRLNIRRVGLIKKGEE-------TI 254
Query: 310 GSMIRL 315
GS +++
Sbjct: 255 GSQVQV 260
>gi|109254803|emb|CAK22263.1| recombinase A [Ochrobactrum oryzae]
gi|148897703|emb|CAM18505.1| recombinase A [Ochrobactrum oryzae]
Length = 299
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/229 (54%), Positives = 161/229 (70%), Gaps = 3/229 (1%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIVEIYG E+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTIAEAQKRGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+ ++IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNCMVIF 182
Query: 253 LNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 INQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 228
>gi|118588632|ref|ZP_01546040.1| recombinase A [Stappia aggregata IAM 12614]
gi|118438618|gb|EAV45251.1| recombinase A [Labrenzia aggregata IAM 12614]
Length = 344
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/243 (51%), Positives = 166/243 (68%), Gaps = 14/243 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI-----STGSLKLDLALGIGGLP 118
M K AL ALSQ+ FGK S++ + + G V+ STGSL LD+ALGIGGLP
Sbjct: 1 MDKTKALDAALSQIERAFGKGSIMKMGQ------GQVVEVQAVSTGSLGLDIALGIGGLP 54
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRIVEIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D +NLLI+
Sbjct: 55 RGRIVEIYGPESSGKTTLALHAVSEAQKTGGICAFIDAEHALDPIYARKLGVDIDNLLIS 114
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+IDV+V+DSVAAL PK E+ + Q+R+M+QALRK
Sbjct: 115 QPDAGEQALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGMQARLMSQALRK 174
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 175 LTASISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIKDR 231
Query: 299 DKV 301
D+V
Sbjct: 232 DEV 234
>gi|77464021|ref|YP_353525.1| recombinase A [Rhodobacter sphaeroides 2.4.1]
gi|126462866|ref|YP_001043980.1| recombinase A [Rhodobacter sphaeroides ATCC 17029]
gi|332558895|ref|ZP_08413217.1| recombinase A [Rhodobacter sphaeroides WS8N]
gi|429209616|ref|ZP_19200846.1| RecA protein [Rhodobacter sp. AKP1]
gi|166220670|sp|A3PLJ2.1|RECA_RHOS1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|77388439|gb|ABA79624.1| Recombinase A, DNA recombination protein [Rhodobacter sphaeroides
2.4.1]
gi|126104530|gb|ABN77208.1| recA protein [Rhodobacter sphaeroides ATCC 17029]
gi|332276607|gb|EGJ21922.1| recombinase A [Rhodobacter sphaeroides WS8N]
gi|428187498|gb|EKX56080.1| RecA protein [Rhodobacter sp. AKP1]
Length = 357
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL+Q+ FGK S++ L STGSL LD+ALGIGGLPKGRI+
Sbjct: 15 MDKAKALESALAQIERQFGKGSIMKLGANSPVMEIEATSTGSLGLDIALGIGGLPKGRII 74
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LHV+ E QK GG CA++D E+ALDP A+ +G++ + LLI+QPD+
Sbjct: 75 EIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLISQPDTG 134
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L +VDTL +SG++++IVVDSVAAL PK EI + M +Q+R+M+QA+RK+ S+
Sbjct: 135 EQALEIVDTLVRSGAVNLIVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAMRKLTASI 194
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D V
Sbjct: 195 GRSNCMVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDRDNV 249
>gi|195970165|ref|NP_385905.2| recombinase A [Sinorhizobium meliloti 1021]
gi|334316434|ref|YP_004549053.1| protein recA [Sinorhizobium meliloti AK83]
gi|384529619|ref|YP_005713707.1| protein recA [Sinorhizobium meliloti BL225C]
gi|384536050|ref|YP_005720135.1| recombinase A [Sinorhizobium meliloti SM11]
gi|407720741|ref|YP_006840403.1| recombinase A [Sinorhizobium meliloti Rm41]
gi|433613582|ref|YP_007190380.1| protein RecA [Sinorhizobium meliloti GR4]
gi|187904183|emb|CAC46378.2| DNA strand exchange and recombination protein [Sinorhizobium
meliloti 1021]
gi|333811795|gb|AEG04464.1| Protein recA [Sinorhizobium meliloti BL225C]
gi|334095428|gb|AEG53439.1| Protein recA [Sinorhizobium meliloti AK83]
gi|336032942|gb|AEH78874.1| recombinase A [Sinorhizobium meliloti SM11]
gi|407318973|emb|CCM67577.1| recombinase A [Sinorhizobium meliloti Rm41]
gi|429551772|gb|AGA06781.1| protein RecA [Sinorhizobium meliloti GR4]
Length = 361
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 164/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+ID++V+DSVAAL+P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDILVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKEREEV 248
>gi|585797|sp|Q08327.1|RECA_ACEPO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|300185|gb|AAC60438.1| RecA [Gluconacetobacter polyoxogenes]
gi|391592|dbj|BAA02478.1| RecA protein [Gluconacetobacter polyoxogenes]
Length = 348
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 169/239 (70%), Gaps = 4/239 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ + + + VISTGSL LD+ALGIGGLP+GRI+
Sbjct: 7 IDKSKALEGALSQIERAFGKGSIMRMGERP-TEQVDVISTGSLGLDIALGIGGLPRGRII 65
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH I EAQ+ GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 66 EIYGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAG 125
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 126 EQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSV 185
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+S+T++IFLNQ+R K G G E T+GGNALKFYA++R+ + R K D+V
Sbjct: 186 SRSNTMLIFLNQIRL--KIGVMFGS-PESTTGGNALKFYASVRMDIRRIGSIKDKDEVT 241
>gi|182679357|ref|YP_001833503.1| recA protein [Beijerinckia indica subsp. indica ATCC 9039]
gi|182635240|gb|ACB96014.1| recA protein [Beijerinckia indica subsp. indica ATCC 9039]
Length = 343
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/240 (50%), Positives = 168/240 (70%), Gaps = 5/240 (2%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + + ISTGSL LD+ALG+GGLP+GR++
Sbjct: 1 MDKTKALDAALSQIERAFGKGSIMRLGKSQKAIEIETISTGSLGLDIALGVGGLPRGRVI 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LHVI EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLTLHVIAEAQKKGGVCAFIDAEHALDPVYARKLGVNLDDLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDNQPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNI 303
+S T++IF+NQ+R K G G E T+GGNALKFYA++RL + R+ I D+ +I
Sbjct: 181 SRSQTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIR--RIGSIKDREDI 235
>gi|408785530|ref|ZP_11197275.1| recombinase A [Rhizobium lupini HPC(L)]
gi|408488678|gb|EKJ96987.1| recombinase A [Rhizobium lupini HPC(L)]
Length = 300
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 162/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 235
>gi|221639883|ref|YP_002526145.1| recombinase A [Rhodobacter sphaeroides KD131]
gi|221160664|gb|ACM01644.1| Protein recA [Rhodobacter sphaeroides KD131]
Length = 367
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL+Q+ FGK S++ L STGSL LD+ALGIGGLPKGRI+
Sbjct: 25 MDKAKALESALAQIERQFGKGSIMKLGANSPVMEIEATSTGSLGLDIALGIGGLPKGRII 84
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LHV+ E QK GG CA++D E+ALDP A+ +G++ + LLI+QPD+
Sbjct: 85 EIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLISQPDTG 144
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L +VDTL +SG++++IVVDSVAAL PK EI + M +Q+R+M+QA+RK+ S+
Sbjct: 145 EQALEIVDTLVRSGAVNLIVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAMRKLTASI 204
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D V
Sbjct: 205 GRSNCMVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDRDNV 259
>gi|154248001|ref|YP_001418959.1| recombinase A [Xanthobacter autotrophicus Py2]
gi|154162086|gb|ABS69302.1| recA protein [Xanthobacter autotrophicus Py2]
Length = 361
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + + + TGSL LD+A+GIGGLPKGR+V
Sbjct: 14 MDKTKALDAALSQIERHFGKGSIMRLGKGGKALEIESVPTGSLGLDIAIGIGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+
Sbjct: 74 EIFGPESSGKTTLALHTVAEAQKRGGTCAFIDAEHALDPIYARKLGVNLDDLLISQPDAG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAIDVLVVDSVAALTPRAELDGEMGDSQPGMQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R + K D+V
Sbjct: 194 SKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGMIKERDEV 248
>gi|112362894|emb|CAL34148.1| recombinase A [Brucella microti CCM 4915]
gi|112362896|emb|CAL34149.1| recombinase A [Brucella microti]
Length = 299
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/229 (54%), Positives = 161/229 (70%), Gaps = 3/229 (1%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIVEIYG E+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+ ++IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISRSNCMVIF 182
Query: 253 LNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 INQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 228
>gi|417636|sp|P32725.1|RECA_RHOS4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|288349|emb|CAA51258.1| recA [Rhodobacter sphaeroides]
Length = 343
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL+Q+ FGK S++ L STGSL LD+ALGIGGLPKGRI+
Sbjct: 1 MDKAKALESALAQIERQFGKGSIMKLGANSPVMEIEATSTGSLGLDIALGIGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LHV+ E QK GG CA++D E+ALDP A+ +G++ + LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L +VDTL +SG++++IVVDSVAAL PK EI + M +Q+R+M+QA+RK+ S+
Sbjct: 121 EQALEIVDTLVRSGAVNLIVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAMRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D V
Sbjct: 181 GRSNCMVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDRDNV 235
>gi|239787354|emb|CAX83831.1| Protein RecA [uncultured bacterium]
Length = 353
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 169/240 (70%), Gaps = 5/240 (2%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL AL+Q+ +FGK S++ L + S ISTGSL LDLALGIGGLPKGRI+E
Sbjct: 5 EKVKALDAALAQIERNFGKGSVMRLGQKDTSMNIESISTGSLGLDLALGIGGLPKGRIIE 64
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
I+G E+SGKTTL LHVI E QK GG CA++D E+ALDPS A +G+ E L+I+QPD+ E
Sbjct: 65 IFGPESSGKTTLTLHVIAECQKKGGICAFVDAEHALDPSYARKLGVKTEELIISQPDTGE 124
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + DTL +SG++D+IV+DSVAAL+PK E+ + + Q+R+M+QALRKI S+
Sbjct: 125 QALEIADTLVRSGAVDIIVIDSVAALVPKAELEGDMGDSHMGLQARLMSQALRKITGSIS 184
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNIL 304
+++ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R+ + DK I+
Sbjct: 185 KTNCMVIFINQIR--QKIGIVFGN-PETTTGGNALKFYASVRLDIR--RIGAVKDKEEIV 239
>gi|384261788|ref|YP_005416974.1| protein recA [Rhodospirillum photometricum DSM 122]
gi|378402888|emb|CCG08004.1| Protein recA [Rhodospirillum photometricum DSM 122]
Length = 372
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/245 (50%), Positives = 169/245 (68%), Gaps = 5/245 (2%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
D M K AL A+ Q+ FGK S++ L + ISTGSL LD+ALG+GGLP+
Sbjct: 24 DKDTMDKQKALEAAVGQIERSFGKGSIMRLGQRERVVETESISTGSLGLDIALGVGGLPR 83
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRIVEIYG E+SGKTTLA+HVI EAQK GG CA++D E+A DP +G++ + LLI+Q
Sbjct: 84 GRIVEIYGPESSGKTTLAMHVIAEAQKKGGSCAFVDAEHAFDPLYGRKLGLNLDELLISQ 143
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG+IDV+VVDSVAAL+PK E+ + + Q+R+M+QALRK+
Sbjct: 144 PDTGEQALEIADTLVRSGAIDVLVVDSVAALVPKAELEGDMGDSHVGLQARLMSQALRKL 203
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
++ +S+TLIIF+NQ+R K G G E T+GGNALKFYA++RL + R+ + D
Sbjct: 204 TGTVSRSNTLIIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDI--RRIGAVKD 258
Query: 300 KVNIL 304
K +I+
Sbjct: 259 KEDIV 263
>gi|398386042|ref|ZP_10544052.1| protein RecA [Sphingobium sp. AP49]
gi|397718974|gb|EJK79549.1| protein RecA [Sphingobium sp. AP49]
Length = 357
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/241 (52%), Positives = 166/241 (68%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M + AL AL+Q+ FGK S + L GSR ISTGSL LD+ALGIGGLPKG
Sbjct: 16 MDRQKALEAALAQIDRAFGKGSAMKL----GSREKIEIEAISTGSLGLDIALGIGGLPKG 71
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G+D + L+++QP
Sbjct: 72 RIIEIYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPGYAKKLGVDIDELIVSQP 131
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L +VDTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 132 DTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLT 191
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +S ++IF+NQVR K G G E T+GGNALKFYA++RL + RT K D
Sbjct: 192 GSISRSKCMVIFINQVRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRTGQIKDRDD 248
Query: 301 V 301
+
Sbjct: 249 I 249
>gi|390451215|ref|ZP_10236794.1| recombinase A [Nitratireductor aquibiodomus RA22]
gi|389661356|gb|EIM72975.1| recombinase A [Nitratireductor aquibiodomus RA22]
Length = 361
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 163/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GRI+
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGANDQVVEIETISTGSLGLDIALGVGGLPRGRII 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DVIVVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGALDVIVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S T++IF+NQ+R K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 194 SRSKTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGSVKDRDEV 248
>gi|298292139|ref|YP_003694078.1| recA protein [Starkeya novella DSM 506]
gi|296928650|gb|ADH89459.1| recA protein [Starkeya novella DSM 506]
Length = 360
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + +STGSL LD+ALGIGGLP+GRIV
Sbjct: 14 MDKAKALDAALSQIERHFGKGSIMRLGKNDKIMEIETVSTGSLGLDIALGIGGLPRGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTLALH I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 74 EIFGPESSGKTTLALHTIAESQKKGGVCAFIDAEHALDPIYARKLGVDLDNLLISQPDAG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLVVDSVAALTPRAELDGEMGDNQPGMQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S T++IF+NQ+R K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 194 NRSQTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYSSVRLDIRRIGAIKERDEV 248
>gi|146424879|emb|CAM12548.1| recombinase A [Ochrobactrum anthropi]
Length = 298
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/234 (53%), Positives = 162/234 (69%), Gaps = 13/234 (5%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLALGIGGLPKGRIVEIYG 127
ALSQ+ FGK S++ L + PVI TGSL LD+ALG+GGLPKGRIVEIYG
Sbjct: 3 ALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIVEIYG 57
Query: 128 REASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLL 187
E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L
Sbjct: 58 PESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQAL 117
Query: 188 SVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSH 247
+ DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+
Sbjct: 118 EITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSN 177
Query: 248 TLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 178 CMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 228
>gi|90423078|ref|YP_531448.1| recombinase A [Rhodopseudomonas palustris BisB18]
gi|90105092|gb|ABD87129.1| RecA protein [Rhodopseudomonas palustris BisB18]
Length = 363
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S IS+GSL LD+ALG+GGLPKGR+V
Sbjct: 15 MDKTKALAAALSQIERQFGKGSVMKLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRVV 74
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH EAQK GG CA++D E+ALDP A +G++ + LLI+QPD
Sbjct: 75 EIYGPESSGKTTLALHCAAEAQKKGGICAFIDAEHALDPVYARKLGVNVDELLISQPDHG 134
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 135 EQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 194
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 195 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGQIKERDEV 249
>gi|146424877|emb|CAM12547.1| recombinase A [Ochrobactrum anthropi]
gi|146424881|emb|CAM12549.1| recombinase A [Ochrobactrum anthropi]
gi|146424883|emb|CAM12550.1| recombinase A [Ochrobactrum anthropi]
gi|146424885|emb|CAM12551.1| recombinase A [Ochrobactrum anthropi]
gi|146424887|emb|CAM12552.1| recombinase A [Ochrobactrum anthropi]
gi|146424889|emb|CAM12553.1| recombinase A [Ochrobactrum anthropi]
gi|146424891|emb|CAM12554.1| recombinase A [Ochrobactrum anthropi]
gi|146424895|emb|CAM12556.1| recombinase A [Ochrobactrum anthropi]
gi|146424897|emb|CAM12557.1| recombinase A [Ochrobactrum anthropi]
gi|146424899|emb|CAM12558.1| recombinase A [Ochrobactrum anthropi]
gi|146424901|emb|CAM12559.1| recombinase A [Ochrobactrum anthropi]
gi|146424903|emb|CAM12560.1| recombinase A [Ochrobactrum anthropi]
gi|146424905|emb|CAM12561.1| recombinase A [Ochrobactrum anthropi]
gi|146424907|emb|CAM12562.1| recombinase A [Ochrobactrum anthropi]
gi|146424909|emb|CAM12563.1| recombinase A [Ochrobactrum anthropi]
gi|146424911|emb|CAM12564.1| recombinase A [Ochrobactrum anthropi]
gi|146424913|emb|CAM12565.1| recombinase A [Ochrobactrum anthropi]
gi|146424915|emb|CAM12566.1| recombinase A [Ochrobactrum anthropi]
gi|146424917|emb|CAM12567.1| recombinase A [Ochrobactrum anthropi]
gi|146424919|emb|CAM12568.1| recombinase A [Ochrobactrum anthropi]
gi|146424921|emb|CAM12569.1| recombinase A [Ochrobactrum anthropi]
gi|146424923|emb|CAM12570.1| recombinase A [Ochrobactrum anthropi]
gi|146424925|emb|CAM12571.1| recombinase A [Ochrobactrum anthropi]
gi|146424927|emb|CAM12572.1| recombinase A [Ochrobactrum anthropi]
gi|146424929|emb|CAM12573.1| recombinase A [Ochrobactrum anthropi]
gi|146424931|emb|CAM12574.1| recombinase A [Ochrobactrum anthropi]
gi|146424933|emb|CAM12575.1| recombinase A [Ochrobactrum anthropi]
gi|146424935|emb|CAM12576.1| recombinase A [Ochrobactrum anthropi]
gi|146424937|emb|CAM12577.1| recombinase A [Ochrobactrum anthropi]
gi|146424939|emb|CAM12578.1| recombinase A [Ochrobactrum anthropi]
gi|146424941|emb|CAM12579.1| recombinase A [Ochrobactrum anthropi]
gi|146424943|emb|CAM12580.1| recombinase A [Ochrobactrum anthropi]
gi|146424945|emb|CAM12581.1| recombinase A [Ochrobactrum anthropi]
gi|146424947|emb|CAM12582.1| recombinase A [Ochrobactrum anthropi]
gi|146424949|emb|CAM12583.1| recombinase A [Ochrobactrum anthropi]
gi|146424951|emb|CAM12584.1| recombinase A [Ochrobactrum anthropi]
gi|146424953|emb|CAM12585.1| recombinase A [Ochrobactrum anthropi]
gi|146424955|emb|CAM12586.1| recombinase A [Ochrobactrum anthropi]
gi|146424957|emb|CAM12587.1| recombinase A [Ochrobactrum anthropi]
gi|146424959|emb|CAM12588.1| recombinase A [Ochrobactrum anthropi]
gi|146424961|emb|CAM12589.1| recombinase A [Ochrobactrum anthropi]
gi|146424963|emb|CAM12590.1| recombinase A [Ochrobactrum anthropi]
gi|146424965|emb|CAM12591.1| recombinase A [Ochrobactrum anthropi]
gi|146424967|emb|CAM12592.1| recombinase A [Ochrobactrum anthropi]
gi|146424969|emb|CAM12593.1| recombinase A [Ochrobactrum anthropi]
gi|146424971|emb|CAM12594.1| recombinase A [Ochrobactrum anthropi]
gi|146424977|emb|CAM12597.1| recombinase A [Ochrobactrum anthropi]
gi|146424979|emb|CAM12598.1| recombinase A [Ochrobactrum anthropi]
gi|146424981|emb|CAM12599.1| recombinase A [Ochrobactrum anthropi]
gi|146424983|emb|CAM12600.1| recombinase A [Ochrobactrum anthropi]
gi|148887235|emb|CAM12784.1| recombinase A [Ochrobactrum anthropi]
gi|148887247|emb|CAM12790.1| recombinase A [Ochrobactrum anthropi]
gi|148897665|emb|CAM18486.1| recombinase A [Ochrobactrum intermedium]
gi|148897695|emb|CAM18501.1| recombinase A [Ochrobactrum lupini]
gi|148897697|emb|CAM18502.1| recombinase A [Ochrobactrum tritici]
gi|148897699|emb|CAM18503.1| recombinase A [Ochrobactrum tritici]
gi|148897701|emb|CAM18504.1| recombinase A [Ochrobactrum tritici]
gi|148897711|emb|CAM18509.1| recombinase A [Ochrobactrum anthropi]
Length = 299
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/234 (53%), Positives = 162/234 (69%), Gaps = 13/234 (5%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLALGIGGLPKGRIVEIYG 127
ALSQ+ FGK S++ L + PVI TGSL LD+ALG+GGLPKGRIVEIYG
Sbjct: 3 ALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIVEIYG 57
Query: 128 REASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLL 187
E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L
Sbjct: 58 PESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQAL 117
Query: 188 SVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSH 247
+ DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+
Sbjct: 118 EITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSN 177
Query: 248 TLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 178 CMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 228
>gi|207366288|emb|CAQ58039.1| recombinase A [Agrobacterium tumefaciens]
gi|207366290|emb|CAQ58040.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 163/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 237
>gi|422594039|ref|ZP_16668331.1| recombinase A [Pseudomonas syringae pv. lachrymans str. M301315]
gi|330984348|gb|EGH82451.1| recombinase A [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 468
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 165/239 (69%), Gaps = 8/239 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRI 122
QK AL AL+Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 5 QKKAALATALTQIEKQFGKGAVM---RMGDQERMAIPAISTGSLNLDIALGIGGLPKGRI 61
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL+AQPD+
Sbjct: 62 VEIYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAAKLGVNVDDLLVAQPDT 121
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SGS+DV++VDSVAAL+PK EI + M+ Q+R+M+QALRKI +
Sbjct: 122 GEQALEITDMLVRSGSVDVLIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGN 181
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ ++ L+IF+NQ+R K G G E T+GGNALKFY+++RL + RT K D +
Sbjct: 182 IKNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRTGAVKDGDNI 237
>gi|418299453|ref|ZP_12911286.1| recombinase A [Agrobacterium tumefaciens CCNWGS0286]
gi|355534918|gb|EHH04214.1| recombinase A [Agrobacterium tumefaciens CCNWGS0286]
Length = 350
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 161/238 (67%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 235
>gi|6225929|sp|Q9ZIQ0.1|RECA_RHOVI RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|3769371|gb|AAC64504.1| RecA protein [Blastochloris viridis]
Length = 348
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL+Q+ FGK S++ L + + ISTGSL LD+ALGIGGLP+GR+V
Sbjct: 1 MDKTKALDAALTQIERAFGKGSIMRLGKSGAALEVETISTGSLGLDIALGIGGLPRGRVV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+
Sbjct: 61 EIFGPESSGKTTLALHTVAEAQKKGGVCAFIDAEHALDPLYARKLGVNLDDLLISQPDAG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSQPGMQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 181 SRSNCMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 235
>gi|86357938|ref|YP_469830.1| recombinase A [Rhizobium etli CFN 42]
gi|123751994|sp|Q2K7T3.1|RECA_RHIEC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|86282040|gb|ABC91103.1| recombinase A protein [Rhizobium etli CFN 42]
gi|388603163|gb|AFK76186.1| recombinase A [Rhizobium etli]
Length = 362
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 164/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKEREEV 248
>gi|16125339|ref|NP_419903.1| recombinase A [Caulobacter crescentus CB15]
gi|221234078|ref|YP_002516514.1| recombinase A [Caulobacter crescentus NA1000]
gi|20178056|sp|Q9A9A7.1|RECA_CAUCR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|254790426|sp|B8H3I7.1|RECA_CAUCN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|13422391|gb|AAK23071.1| recA protein [Caulobacter crescentus CB15]
gi|220963250|gb|ACL94606.1| RecA protein [Caulobacter crescentus NA1000]
Length = 356
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/243 (50%), Positives = 168/243 (69%), Gaps = 18/243 (7%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPKGR 121
K AL AL+Q+ FGK S++ L +G V +STGSL LD+ALGIGGLPKGR
Sbjct: 17 KQRALEAALAQIDRAFGKGSVMKL-----GEKGKVEIESVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVE+YG E+SGKTTLALHV+ E QK GG A++D E+ALDPS A +G++ +NLL++QPD
Sbjct: 72 IVEVYGPESSGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAYKLGVNLDNLLVSQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++VVDSVAAL PK EI + Q+R+M+QALRK+
Sbjct: 132 NGEQALEITDTLVRSGAVDIVVVDSVAALTPKAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRM---DEVTSGGNALKFYAALRLRMMRTRLFKIA 298
S+ +++T++IF+NQ+R +G M E T+GGNALKFYA++RL + RT K
Sbjct: 192 SINKANTIVIFINQIRHK------IGVMYGSPETTTGGNALKFYASVRLDIRRTGSVKAR 245
Query: 299 DKV 301
D++
Sbjct: 246 DEI 248
>gi|334345425|ref|YP_004553977.1| protein recA [Sphingobium chlorophenolicum L-1]
gi|334102047|gb|AEG49471.1| Protein recA [Sphingobium chlorophenolicum L-1]
Length = 357
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/244 (52%), Positives = 170/244 (69%), Gaps = 12/244 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M + AL ALSQ+ FGK S + L GSR ISTGSL LD+ALGIGGLP+G
Sbjct: 16 MDRQKALEAALSQIDRAFGKGSAMKL----GSREKIEIEAISTGSLGLDIALGIGGLPRG 71
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G+D + L+++QP
Sbjct: 72 RIIEIYGPESSGKTTLALHAIAEAQKTGGIAAFVDAEHALDPGYAKKLGVDIDELIVSQP 131
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L +VDTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 132 DTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLT 191
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +S ++IF+NQVR K G G E T+GGNALKFYA++RL + RT +I D+
Sbjct: 192 GSISRSKCMVIFINQVRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRT--GQIKDR 246
Query: 301 VNIL 304
+I+
Sbjct: 247 EDIV 250
>gi|189485625|ref|YP_001956566.1| recombinase A [uncultured Termite group 1 bacterium phylotype
Rs-D17]
gi|170287584|dbj|BAG14105.1| recombinase A [uncultured Termite group 1 bacterium phylotype
Rs-D17]
Length = 354
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/240 (50%), Positives = 166/240 (69%), Gaps = 9/240 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL LALSQ+ DFGKE+++ L R I TG+L LD+A+GIGG+P+GRI+E
Sbjct: 5 EKLKALDLALSQIEKDFGKEAIMRLGEKHSKERVDSIPTGALPLDIAIGIGGIPRGRIIE 64
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTLAL ++ EAQKLGG AY+D E+A+DP A+ +G+D NLLI+QPDS E
Sbjct: 65 IYGPESSGKTTLALCMVAEAQKLGGIAAYIDAEHAMDPEYAQKLGVDINNLLISQPDSGE 124
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++D+IVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++
Sbjct: 125 QGLEIADKLIRSGAVDIIVVDSVAALVPKAEIEGEMGDSFVGLQARLMSQALRKLTSNIS 184
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRM---DEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S T I+F+NQ+R Q +G M E T GG ALKFY+++RL + R K D++
Sbjct: 185 KSKTSIVFINQLR------QKIGVMWGSPETTPGGLALKFYSSVRLDIRRIESIKKGDEI 238
>gi|394989244|ref|ZP_10382078.1| recombinase A [Sulfuricella denitrificans skB26]
gi|393791663|dbj|GAB71717.1| recombinase A [Sulfuricella denitrificans skB26]
Length = 343
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 124/250 (49%), Positives = 171/250 (68%), Gaps = 10/250 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL ALSQ+ FGK S++ L + V+STGSL LD+ALG+GGLP+GR+VEI
Sbjct: 5 KNKALAAALSQIEKQFGKGSIMRLGDGEVVKDIQVVSTGSLGLDIALGVGGLPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QKLGG A++D E+ALDP A+ +G++ +LLI+QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDPQYAQKLGVNVSDLLISQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SGS+D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIADMLVRSGSVDIVVIDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTGNIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNILE 305
++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 185 TNTLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKKGDEV---- 237
Query: 306 VVNIGSMIRL 315
IGS R+
Sbjct: 238 ---IGSETRV 244
>gi|207366292|emb|CAQ58041.1| recombinase A [Agrobacterium tumefaciens]
gi|207366294|emb|CAQ58042.1| recombinase A [Agrobacterium tumefaciens]
gi|207366296|emb|CAQ58043.1| recombinase A [Agrobacterium tumefaciens]
gi|207366298|emb|CAQ58044.1| recombinase A [Agrobacterium tumefaciens]
gi|207366300|emb|CAQ58045.1| recombinase A [Agrobacterium tumefaciens]
gi|207366302|emb|CAQ58046.1| recombinase A [Agrobacterium tumefaciens]
gi|207366304|emb|CAQ58047.1| recombinase A [Agrobacterium tumefaciens]
gi|207366306|emb|CAQ58048.1| recombinase A [Agrobacterium tumefaciens]
gi|207366308|emb|CAQ58049.1| recombinase A [Agrobacterium tumefaciens]
gi|207366310|emb|CAQ58050.1| recombinase A [Agrobacterium tumefaciens]
gi|207366312|emb|CAQ58051.1| recombinase A [Agrobacterium tumefaciens]
gi|207366348|emb|CAQ58069.1| recombinase A [Agrobacterium tumefaciens]
gi|444436566|gb|AGE09651.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436574|gb|AGE09655.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436604|gb|AGE09670.1| recombinase A, partial [Agrobacterium tumefaciens]
Length = 323
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 162/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 237
>gi|389689406|ref|ZP_10178744.1| protein RecA [Microvirga sp. WSM3557]
gi|388590317|gb|EIM30602.1| protein RecA [Microvirga sp. WSM3557]
Length = 364
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 167/238 (70%), Gaps = 11/238 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPKGR 121
K AL ALSQ+ FGK S++ L G + PV +STGSL LD+ALG+GGLP+GR
Sbjct: 18 KSKALDAALSQIERAFGKGSIMRL----GKGQQPVEIETVSTGSLGLDIALGVGGLPRGR 73
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD
Sbjct: 74 IIEIYGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPD 133
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+V+DSVAAL PK E+ + + Q+R+M+QALRK+
Sbjct: 134 TGEQALEIADTLVRSGAVDVLVIDSVAALTPKAELDGEMGEVQPGLQARLMSQALRKLTG 193
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D
Sbjct: 194 SISRSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRVSTLKDRD 248
>gi|207366318|emb|CAQ58054.1| recombinase A [Agrobacterium tumefaciens]
gi|207366320|emb|CAQ58055.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 162/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 237
>gi|444436564|gb|AGE09650.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436568|gb|AGE09652.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436570|gb|AGE09653.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436572|gb|AGE09654.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436576|gb|AGE09656.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436578|gb|AGE09657.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436580|gb|AGE09658.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436582|gb|AGE09659.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436584|gb|AGE09660.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436586|gb|AGE09661.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436588|gb|AGE09662.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436590|gb|AGE09663.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436592|gb|AGE09664.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436594|gb|AGE09665.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436596|gb|AGE09666.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436598|gb|AGE09667.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436600|gb|AGE09668.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436602|gb|AGE09669.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436606|gb|AGE09671.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436608|gb|AGE09672.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436610|gb|AGE09673.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436612|gb|AGE09674.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436614|gb|AGE09675.1| recombinase A, partial [Agrobacterium tumefaciens]
Length = 323
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 162/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 237
>gi|377555585|ref|ZP_09785313.1| recombinase A [endosymbiont of Bathymodiolus sp.]
Length = 341
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 166/237 (70%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
QK AL++AL+Q+ FGK S++ L + +STGSL LD+ALGIGGLP+GR++E
Sbjct: 4 QKKQALKVALTQIDKQFGKGSVMFLGDAGANTDIEAVSTGSLSLDIALGIGGLPRGRVIE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LHVI E QKLGG A++D E+ALDP A+ +G++ + LLI+QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHVIAEMQKLGGTAAFIDAEHALDPQYAKRLGVNTDELLISQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG +D++VVDSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEITDMLVRSGGVDIVVVDSVAALTPKAEIEGEMGASHMGLQARLMSQALRKLTSNIK 183
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+++T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 KTNTMVIFINQLRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKKGDEI 237
>gi|337757325|emb|CCA61584.1| recombinase A [Agrobacterium vitis]
Length = 319
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/226 (53%), Positives = 158/226 (69%), Gaps = 3/226 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGANEKIVEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGVCAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+V+DSVAAL PK EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAIDVLVIDSVAALTPKAEIEGEMGDSLPGMQARLMSQALRKLTGSISR 180
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
S+ +++F+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 181 SNCMVVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 223
>gi|424910654|ref|ZP_18334031.1| protein RecA [Rhizobium leguminosarum bv. viciae USDA 2370]
gi|392846685|gb|EJA99207.1| protein RecA [Rhizobium leguminosarum bv. viciae USDA 2370]
Length = 362
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 163/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 248
>gi|395793295|ref|ZP_10472700.1| protein recA [Bartonella vinsonii subsp. arupensis Pm136co]
gi|395431609|gb|EJF97627.1| protein recA [Bartonella vinsonii subsp. arupensis Pm136co]
Length = 347
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKAKALNAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK+GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKDRDAI 235
>gi|410666362|ref|YP_006918733.1| recombinase A [Simiduia agarivorans SA1 = DSM 21679]
gi|409028719|gb|AFV01004.1| recombinase A [Simiduia agarivorans SA1 = DSM 21679]
Length = 347
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 166/239 (69%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL+ ALSQ+ FGK +++ + G R P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 5 KEKALQAALSQIERQFGKGTVMRM----GDREQVAIPSISTGSLGLDVALGIGGLPKGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI EAQK GG CA++D E+ALDP AE +G++ + L+++QPD+
Sbjct: 61 VEIYGPESSGKTTLTLQVIAEAQKAGGVCAFVDAEHALDPIYAEKLGVNVDELIVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L V D L +SG++DV+VVDSVAAL PK EI + + Q+R+M+QALRKI +
Sbjct: 121 GEQALEVADMLVRSGAVDVLVVDSVAALTPKAEIEGEMGDHHVGLQARLMSQALRKITGN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ ++ L IF+NQ+R K G G E T+GGNALKFY+++RL + RT K D+V
Sbjct: 181 IKNANCLAIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRTGAVKDGDEV 236
>gi|407976207|ref|ZP_11157108.1| recombinase A [Nitratireductor indicus C115]
gi|407428382|gb|EKF41065.1| recombinase A [Nitratireductor indicus C115]
Length = 361
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 162/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L ISTGSL LD+ALGIGGLP+GRI+
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGANDQVVEIETISTGSLGLDIALGIGGLPRGRII 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DVIVVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGALDVIVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S T++IF+NQ+R K G G E T+GGNALKFY+++RL + R K D+
Sbjct: 194 SRSKTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGSVKDRDET 248
>gi|269469106|gb|EEZ80654.1| RecA/RadA recombinase [uncultured SUP05 cluster bacterium]
Length = 335
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/237 (49%), Positives = 166/237 (70%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
QK AL+ AL+Q+ FGK S++ L +STGSL LD+ALGIGGLP+GR+VE
Sbjct: 4 QKKQALKAALAQIDKQFGKGSVMFLGDENAHADIEAVSTGSLSLDIALGIGGLPRGRVVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LHVI E QKLGG A++D E+ALDP A+ +G++ ++LLI+QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHVIAEMQKLGGTAAFIDAEHALDPQYAKRLGVNTDDLLISQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SGS+D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEITDMLVRSGSVDIVVIDSVAALTPKAEIEGEMGASHMGLQARLMSQALRKLTSNIK 183
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+++T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 KTNTMVIFINQLRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKKGDEI 237
>gi|255287396|emb|CAQ58037.2| recombinase A [Agrobacterium tumefaciens]
Length = 320
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 163/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 237
>gi|326387207|ref|ZP_08208817.1| recombinase A [Novosphingobium nitrogenifigens DSM 19370]
gi|326208388|gb|EGD59195.1| recombinase A [Novosphingobium nitrogenifigens DSM 19370]
Length = 356
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/240 (52%), Positives = 170/240 (70%), Gaps = 4/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K M + AL AL+Q+ FGK S++ L + + + IS+GSL LD+ALGIGGLP+GR
Sbjct: 14 KEMDRQKALDAALAQIDRAFGKGSVMKLGQKE-TMQIEAISSGSLGLDIALGIGGLPRGR 72
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLALHVI EAQK GG A++D E+ALDP A+ +G+D +NL+++QPD
Sbjct: 73 IVEIYGPESSGKTTLALHVIAEAQKAGGTAAFVDAEHALDPVYAKKLGVDIDNLIVSQPD 132
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 133 TGEQALEITDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTG 192
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S L+IF+NQVR K G G E T+GGNALKFYA++RL + RT K D++
Sbjct: 193 SISRSRCLVIFINQVRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRTGQIKDRDEI 249
>gi|304391434|ref|ZP_07373376.1| protein RecA [Ahrensia sp. R2A130]
gi|303295663|gb|EFL90021.1| protein RecA [Ahrensia sp. R2A130]
Length = 368
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/240 (50%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL AL Q+ FGK S++ L + ISTG + LD+ALG+GGLPKGR
Sbjct: 12 KKLDKSKALEAALGQIERAFGKGSIMRLGANEQAVEIETISTGCIGLDIALGVGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTT+ALH + EAQK GG CA++D E+ALDP A+ +G++ ENLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTMALHTVAEAQKEGGICAFVDAEHALDPVYAKKLGVNLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+ D++V+DSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEIADTLVRSGACDILVIDSVAALTPRAEIEGEMGASLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIKDRDEI 248
>gi|336324365|ref|YP_004604332.1| protein recA [Flexistipes sinusarabici DSM 4947]
gi|336107946|gb|AEI15764.1| Protein recA [Flexistipes sinusarabici DSM 4947]
Length = 348
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/239 (49%), Positives = 167/239 (69%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ LAL ++ DFGK +++ L + + PVI TGSL LD+ALG+GG+P+GRIVEI
Sbjct: 5 KQKAIDLALGKIERDFGKGAVMRLGDK-AAEKLPVIPTGSLSLDIALGVGGVPRGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALHVI EAQK GG A++D E+A+DP A+A+G+D +NLL++QPDS E
Sbjct: 64 YGAESSGKTTVALHVIAEAQKKGGVAAFVDAEHAMDPVYADAIGVDTDNLLVSQPDSGEA 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + +TL +SG++DV+V+DSVAAL P+ EI + + Q+R+M+QALRK+ + +
Sbjct: 124 ALEIAETLVRSGAVDVVVIDSVAALTPRAEIEGEMGDAHMGLQARLMSQALRKLTSIVNK 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRM---DEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S T +IF+NQ R Q +G M E T+GGNALKFY+ +R+ + RT K D+
Sbjct: 184 SRTTLIFINQTR------QKIGVMFGNPETTTGGNALKFYSTVRVEVKRTASLKEKDET 236
>gi|319404396|emb|CBI77999.1| RecA protein [Bartonella rochalimae ATCC BAA-1498]
Length = 347
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/252 (50%), Positives = 167/252 (66%), Gaps = 10/252 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKTKALEAALSQIERSFGKGSIMRLGQKEQVVEIETVSTGSLSLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D NL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHSIAEAQKNGGVCAFVDAEHALDPIYARKLGVDLANLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNI 303
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIKDRDTI-- 235
Query: 304 LEVVNIGSMIRL 315
IGS R+
Sbjct: 236 -----IGSQTRV 242
>gi|1172889|sp|P42447.1|RECA_RHOCA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|558631|emb|CAA57673.1| recA [Rhodobacter capsulatus]
gi|1581748|prf||2117248A recA gene
Length = 355
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 128/246 (52%), Positives = 167/246 (67%), Gaps = 9/246 (3%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI---STGSLKLDLALGIG 115
+D K AL AL+Q+ FGK S++ L G P I STGSL LD+ALGIG
Sbjct: 10 NDKGKADKQKALECALAQIERQFGKGSIMKLG---GDTPPPEIEATSTGSLGLDIALGIG 66
Query: 116 GLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENL 175
GLPKGRIVEIYG E+SGKTTL LH I E QK GG CA++D E+ALDP A+ +G+ E+L
Sbjct: 67 GLPKGRIVEIYGPESSGKTTLTLHCIAEEQKKGGVCAFVDAEHALDPYYAKKLGVSLEDL 126
Query: 176 LIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQA 235
LI+QPD+ E L +VDTL +SG++ ++VVDSVAAL PK EI + AQ+R+M+QA
Sbjct: 127 LISQPDTGEQALEIVDTLVRSGAVSLVVVDSVAALTPKAEIEGDMGDATVGAQARLMSQA 186
Query: 236 LRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLF 295
+RK+ S+ +S+ ++IF+NQ+R K G G E TSGGNALKFYA++RL + RT
Sbjct: 187 MRKLTASIGRSNCMVIFINQIRM--KIGVMFGS-PETTSGGNALKFYASVRLDIRRTGAI 243
Query: 296 KIADKV 301
K D+V
Sbjct: 244 KDRDEV 249
>gi|146278408|ref|YP_001168567.1| recombinase A [Rhodobacter sphaeroides ATCC 17025]
gi|166220671|sp|A4WV48.1|RECA_RHOS5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|145556649|gb|ABP71262.1| recA protein [Rhodobacter sphaeroides ATCC 17025]
Length = 357
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL+Q+ FGK S++ L STGSL LD+ALGIGGLPKGRI+
Sbjct: 15 MDKAKALESALAQIERQFGKGSIMKLGANSPVMEIEATSTGSLGLDIALGIGGLPKGRII 74
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LHV+ E QK GG CA++D E+ALDP+ A+ +G++ + LLI+QPD+
Sbjct: 75 EIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPAYAKKLGVNLDELLISQPDTG 134
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L +VDTL +SG++ +IVVDSVAAL PK EI + M +Q+R+M+QA+RK+ S+
Sbjct: 135 EQALEIVDTLVRSGAVSLIVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAMRKLTASI 194
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D V
Sbjct: 195 GRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGGIKDRDNV 249
>gi|207366280|emb|CAQ58035.1| recombinase A [Agrobacterium tumefaciens]
gi|207366286|emb|CAQ58038.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 163/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 237
>gi|331000526|ref|ZP_08324197.1| RecA protein [Parasutterella excrementihominis YIT 11859]
gi|329571290|gb|EGG52979.1| RecA protein [Parasutterella excrementihominis YIT 11859]
Length = 367
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/239 (49%), Positives = 171/239 (71%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKGRI 122
+ AL++AL Q++ FGK+++LS+ GS+ V+STGS LDLALG+GGLP+GRI
Sbjct: 20 RKKALKMALDQISKQFGKDAILSM----GSQPDQNLDVVSTGSFTLDLALGVGGLPRGRI 75
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL LH++ E QKLGG CA++D E+ALD A+A+G+ ++LL++QPDS
Sbjct: 76 VEIYGPESSGKTTLTLHILAEMQKLGGTCAFIDAEHALDVKYAKALGVKVDDLLLSQPDS 135
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++D++V+DSVAAL+P+ EI + Q+R+M+QALRK+ S
Sbjct: 136 GEQALEITDALVRSGAVDLVVIDSVAALVPRSEIEGDMGEALPGLQARLMSQALRKLTSS 195
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S+TL++F+NQVR K G G E T+GGNALKFYA +R+ + RT K D++
Sbjct: 196 IKKSNTLVVFINQVR--QKIGVVYGS-PETTTGGNALKFYATIRMDIRRTGGIKQGDEI 251
>gi|395782692|ref|ZP_10463064.1| protein recA [Bartonella rattimassiliensis 15908]
gi|395416570|gb|EJF82940.1| protein recA [Bartonella rattimassiliensis 15908]
Length = 347
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 162/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + + TGSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKTKALNAALSQIERSFGKGSIMRLGQKEQVVEIETVPTGSLSLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKSGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKDRDMI 235
>gi|88798291|ref|ZP_01113877.1| recombinase A [Reinekea blandensis MED297]
gi|88779067|gb|EAR10256.1| recombinase A [Reinekea sp. MED297]
Length = 365
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 167/239 (69%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL ALSQ+ FGK S++ + G + P ISTGSL LD+ALGIGGLPKGR+
Sbjct: 10 KEKALSAALSQIERQFGKGSVMRM----GDQEKVNVPAISTGSLGLDIALGIGGLPKGRV 65
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI EAQK GG CA++D E+ALDP+ A +G++ ++LL++QPD+
Sbjct: 66 VEIYGPESSGKTTLTLQVIAEAQKAGGTCAFVDAEHALDPNYAGKLGVNVDDLLVSQPDT 125
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI +
Sbjct: 126 GEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDHHVGLQARLMSQALRKITGN 185
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ ++ L+IF+NQ+R K G G E T+GGNALKFY+++RL + RT K D+V
Sbjct: 186 IKTANCLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRTGTIKDGDEV 241
>gi|207366278|emb|CAQ58034.1| recombinase A [Agrobacterium tumefaciens]
gi|207366342|emb|CAQ58066.1| recombinase A [Agrobacterium tumefaciens]
gi|207366344|emb|CAQ58067.1| recombinase A [Agrobacterium tumefaciens]
gi|255287394|emb|CAQ58036.2| recombinase A [Agrobacterium tumefaciens]
gi|444299282|emb|CCP29590.1| recombinase A, partial [Agrobacterium genomosp. 7]
gi|444299290|emb|CCP29594.1| recombinase A, partial [Agrobacterium genomosp. 9]
Length = 323
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 163/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 237
>gi|408375592|ref|ZP_11173255.1| recA protein [Alcanivorax hongdengensis A-11-3]
gi|407764556|gb|EKF73030.1| recA protein [Alcanivorax hongdengensis A-11-3]
Length = 344
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 122/240 (50%), Positives = 167/240 (69%), Gaps = 10/240 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ + G R R P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 4 KSKALSAALSQIERQFGKGSVMRM----GDRKRERMPSISTGSLGLDIALGIGGLPKGRI 59
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI +AQK G CA++D E+ALDP AE +G++ ++L+++QPD+
Sbjct: 60 VEIYGPESSGKTTLTLSVIAQAQKKGATCAFVDAEHALDPDYAEKLGVNVDDLIVSQPDT 119
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DV++VDSVAAL+PK EI + + Q+R+M+QALRKI +
Sbjct: 120 GEQALEITDMLVRSGAVDVVIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGN 179
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+ ++TL++F+NQ+R K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 180 VKNANTLVVFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRIGAVKQGDEVT 236
>gi|395767195|ref|ZP_10447730.1| protein recA [Bartonella doshiae NCTC 12862]
gi|395414508|gb|EJF80950.1| protein recA [Bartonella doshiae NCTC 12862]
Length = 347
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK+GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKDRDAI 235
>gi|407777783|ref|ZP_11125051.1| recombinase A [Nitratireductor pacificus pht-3B]
gi|407300583|gb|EKF19707.1| recombinase A [Nitratireductor pacificus pht-3B]
Length = 360
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/228 (53%), Positives = 159/228 (69%), Gaps = 3/228 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GRI+
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGANDQVVEIETISTGSLGLDIALGVGGLPRGRII 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTMALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DVIVVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGALDVIVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
+S T++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 194 SRSKTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 238
>gi|371782147|emb|CCE46140.1| recombinase A, partial [Rhizobium skierniewicense]
Length = 290
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 122/232 (52%), Positives = 160/232 (68%), Gaps = 3/232 (1%)
Query: 70 LRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGRE 129
L ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EIYG E
Sbjct: 1 LEAALSQIERSFGKGSIMKLGSNESIVEVETVSTGSLSLDVALGIGGLPKGRIIEIYGPE 60
Query: 130 ASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSV 189
+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D NLLI+QPD+ E L +
Sbjct: 61 SSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLHNLLISQPDTGEQALEI 120
Query: 190 VDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTL 249
DTL +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+ +S T+
Sbjct: 121 TDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSKTM 180
Query: 250 IIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+IF+NQ+R K G G EVT+GGNALKFYA++RL + R K ++V
Sbjct: 181 VIFINQIRM--KIGISYGS-PEVTTGGNALKFYASVRLDIRRIGAVKDREEV 229
>gi|347758444|ref|YP_004866006.1| protein RecA [Micavibrio aeruginosavorus ARL-13]
gi|347590962|gb|AEP10004.1| protein RecA [Micavibrio aeruginosavorus ARL-13]
Length = 383
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 169/238 (71%), Gaps = 5/238 (2%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL AL+Q+ FGK S++ L + +STGSL LD+ALGIGGLP+GRI+E
Sbjct: 15 EKTKALDAALAQIERAFGKGSIMKLTGDSNPMQVEAVSTGSLGLDIALGIGGLPRGRIIE 74
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
++G E+SGKTTLAL VI EAQK GG CA +D E+ALDPS A+ +G++ ++LLI+QPD+ E
Sbjct: 75 VFGPESSGKTTLALQVIAEAQKAGGTCAIVDAEHALDPSYAKKLGVNIDDLLISQPDTGE 134
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + DTL +SG++DV+V+DSVAAL+P+ E+ + + Q+R+M+QALRKI S+
Sbjct: 135 QALEIADTLVRSGALDVLVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKITGSIS 194
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+S T++IF+NQ+R K G G E T+GGNALKFYA++RL + R+ I DK N
Sbjct: 195 RSRTIVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDI--RRIGTIKDKEN 247
>gi|395789472|ref|ZP_10468992.1| protein recA [Bartonella taylorii 8TBB]
gi|395430015|gb|EJF96067.1| protein recA [Bartonella taylorii 8TBB]
Length = 347
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK+GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKDRDMI 235
>gi|207366346|emb|CAQ58068.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 162/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 237
>gi|303256569|ref|ZP_07342583.1| protein RecA [Burkholderiales bacterium 1_1_47]
gi|302860060|gb|EFL83137.1| protein RecA [Burkholderiales bacterium 1_1_47]
Length = 353
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/239 (49%), Positives = 171/239 (71%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKGRI 122
+ AL++AL Q++ FGK+++LS+ GS+ V+STGS LDLALG+GGLP+GRI
Sbjct: 6 RKKALKMALDQISKQFGKDAILSM----GSQPDQNLDVVSTGSFTLDLALGVGGLPRGRI 61
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL LH++ E QKLGG CA++D E+ALD A+A+G+ ++LL++QPDS
Sbjct: 62 VEIYGPESSGKTTLTLHILAEMQKLGGTCAFIDAEHALDVKYAKALGVKVDDLLLSQPDS 121
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++D++V+DSVAAL+P+ EI + Q+R+M+QALRK+ S
Sbjct: 122 GEQALEITDALVRSGAVDLVVIDSVAALVPRSEIEGDMGEALPGLQARLMSQALRKLTSS 181
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S+TL++F+NQVR K G G E T+GGNALKFYA +R+ + RT K D++
Sbjct: 182 IKKSNTLVVFINQVR--QKIGVVYGS-PETTTGGNALKFYATIRMDIRRTGGIKQGDEI 237
>gi|295688601|ref|YP_003592294.1| recombination protein RecA [Caulobacter segnis ATCC 21756]
gi|295430504|gb|ADG09676.1| recA protein [Caulobacter segnis ATCC 21756]
Length = 356
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/243 (48%), Positives = 169/243 (69%), Gaps = 18/243 (7%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPKGR 121
K AL AL+Q+ FGK S++ L +G V +STGSL LD+ALGIGGLPKGR
Sbjct: 17 KQRALEAALAQIDRAFGKGSVMKL-----GEKGKVEMESVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+E+YG E+SGKTTLALHV+ E QK GG A++D E+ALDPS A +G++ ++LL++QPD
Sbjct: 72 IIEVYGPESSGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAHKLGVNLDSLLVSQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++V+DSVAAL PK EI + Q+R+M+QALRK+
Sbjct: 132 NGEQALEITDTLVRSGAVDIVVIDSVAALTPKAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRM---DEVTSGGNALKFYAALRLRMMRTRLFKIA 298
S+ +++T++IF+NQ+R +G M E T+GGNALKFYA++RL + RT K+
Sbjct: 192 SINKANTIVIFINQIRHK------IGVMYGSPETTTGGNALKFYASVRLDIRRTGSVKVR 245
Query: 299 DKV 301
D++
Sbjct: 246 DEI 248
>gi|395765153|ref|ZP_10445769.1| protein recA [Bartonella sp. DB5-6]
gi|395413006|gb|EJF79485.1| protein recA [Bartonella sp. DB5-6]
Length = 347
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK+GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKDRDMI 235
>gi|270157136|ref|ZP_06185793.1| recombinase A [Legionella longbeachae D-4968]
gi|289164459|ref|YP_003454597.1| RecA protein [Legionella longbeachae NSW150]
gi|269989161|gb|EEZ95415.1| recombinase A [Legionella longbeachae D-4968]
gi|288857632|emb|CBJ11472.1| RecA protein [Legionella longbeachae NSW150]
Length = 347
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/236 (51%), Positives = 165/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ + +R ISTGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KQKALSAALSQIERQFGKGSVMRMGDSSVARDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QK+GG A++D E+ALDPS A+ +G++ + LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAECQKIGGTAAFIDAEHALDPSYAQKLGVNVDELLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DVI+VDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSGAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K +++
Sbjct: 185 SNTLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKKGEEI 237
>gi|110834662|ref|YP_693521.1| recA protein [Alcanivorax borkumensis SK2]
gi|110647773|emb|CAL17249.1| recA protein [Alcanivorax borkumensis SK2]
Length = 344
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 122/240 (50%), Positives = 167/240 (69%), Gaps = 10/240 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ + G R R P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 4 KSKALSAALSQIERQFGKGSVMRM----GDRKRERMPSISTGSLGLDVALGIGGLPKGRI 59
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI +AQK G CA++D E+ALDP AE +G++ ++L+++QPD+
Sbjct: 60 VEIYGPESSGKTTLTLSVIAQAQKKGATCAFVDAEHALDPDYAEKLGVNVDDLIVSQPDT 119
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DV++VDSVAAL+PK EI + + Q+R+M+QALRKI +
Sbjct: 120 GEQALEITDMLVRSGAVDVVIVDSVAALVPKAEIEGEMGDTHVGLQARLMSQALRKITGN 179
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+ ++TL++F+NQ+R K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 180 VKNANTLVVFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRIGAVKQGDEVT 236
>gi|423713065|ref|ZP_17687325.1| protein recA [Bartonella vinsonii subsp. arupensis OK-94-513]
gi|395424691|gb|EJF90871.1| protein recA [Bartonella vinsonii subsp. arupensis OK-94-513]
Length = 347
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKAKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK+GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKDRDAI 235
>gi|163852021|ref|YP_001640064.1| recA protein [Methylobacterium extorquens PA1]
gi|218530775|ref|YP_002421591.1| recA protein [Methylobacterium extorquens CM4]
gi|240139288|ref|YP_002963763.1| DNA strand exchange and recombination protein [Methylobacterium
extorquens AM1]
gi|254561744|ref|YP_003068839.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Methylobacterium extorquens DM4]
gi|418061813|ref|ZP_12699648.1| Protein recA [Methylobacterium extorquens DSM 13060]
gi|163663626|gb|ABY30993.1| recA protein [Methylobacterium extorquens PA1]
gi|218523078|gb|ACK83663.1| recA protein [Methylobacterium extorquens CM4]
gi|240009260|gb|ACS40486.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Methylobacterium extorquens AM1]
gi|254269022|emb|CAX24983.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Methylobacterium extorquens DM4]
gi|373564630|gb|EHP90724.1| Protein recA [Methylobacterium extorquens DSM 13060]
Length = 366
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 120/235 (51%), Positives = 164/235 (69%), Gaps = 3/235 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ AL+Q+ FGK S++ L + + ISTGSL LD+ALG+GGLP+GR+VEI
Sbjct: 21 KSKAIEAALTQIERAFGKGSIMRLGKSDKVQEVETISTGSLGLDIALGVGGLPRGRVVEI 80
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+ E
Sbjct: 81 YGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQ 140
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 141 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGESQPGLQARLMSQALRKLTGSISR 200
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+
Sbjct: 201 SNCMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRVSTLKDRDE 252
>gi|395787671|ref|ZP_10467263.1| protein recA [Bartonella birtlesii LL-WM9]
gi|395410293|gb|EJF76848.1| protein recA [Bartonella birtlesii LL-WM9]
Length = 347
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK+GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKDRDMI 235
>gi|374705872|ref|ZP_09712742.1| recombinase A [Pseudomonas sp. S9]
Length = 347
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 125/237 (52%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQKLG CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKLGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|207366324|emb|CAQ58057.1| recombinase A [Agrobacterium tumefaciens]
gi|207366354|emb|CAQ58072.1| recombinase A [Agrobacterium tumefaciens]
gi|207366360|emb|CAQ58075.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 162/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 237
>gi|294677288|ref|YP_003577903.1| RecA protein [Rhodobacter capsulatus SB 1003]
gi|294476108|gb|ADE85496.1| RecA protein [Rhodobacter capsulatus SB 1003]
Length = 355
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 128/246 (52%), Positives = 167/246 (67%), Gaps = 9/246 (3%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI---STGSLKLDLALGIG 115
+D K AL AL+Q+ FGK S++ L G P I STGSL LD+ALGIG
Sbjct: 10 NDKGKADKQKALESALAQIERQFGKGSIMKLG---GDTPPPEIEATSTGSLGLDIALGIG 66
Query: 116 GLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENL 175
GLPKGRIVEIYG E+SGKTTL LH I E QK GG CA++D E+ALDP A+ +G+ E+L
Sbjct: 67 GLPKGRIVEIYGPESSGKTTLTLHCIAEEQKKGGVCAFVDAEHALDPYYAKKLGVSLEDL 126
Query: 176 LIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQA 235
LI+QPD+ E L +VDTL +SG++ ++VVDSVAAL PK EI + AQ+R+M+QA
Sbjct: 127 LISQPDTGEQALEIVDTLVRSGAVSLVVVDSVAALTPKAEIEGDMGDATVGAQARLMSQA 186
Query: 236 LRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLF 295
+RK+ S+ +S+ ++IF+NQ+R K G G E TSGGNALKFYA++RL + RT
Sbjct: 187 MRKLTASIGRSNCMVIFINQIRM--KIGVMFGS-PETTSGGNALKFYASVRLDIRRTGAI 243
Query: 296 KIADKV 301
K D+V
Sbjct: 244 KDRDEV 249
>gi|334143598|ref|YP_004536754.1| protein recA [Thioalkalimicrobium cyclicum ALM1]
gi|333964509|gb|AEG31275.1| Protein recA [Thioalkalimicrobium cyclicum ALM1]
Length = 347
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 162/236 (68%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL Q+ FGK S++ + R ISTGSL LD+ALGI GLPKGR++EI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRMGDSTAPRDIEAISTGSLGLDIALGIAGLPKGRVIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LH I EAQK GG A++D E+ALDPS AE +G+D +NLL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLHAIAEAQKKGGVAAFVDAEHALDPSYAEKLGVDVDNLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG +D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIADMLVRSGGVDIVVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K +++
Sbjct: 185 TNTLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIKKGEEI 237
>gi|338814546|ref|ZP_08626560.1| recA protein [Acetonema longum DSM 6540]
gi|337273482|gb|EGO62105.1| recA protein [Acetonema longum DSM 6540]
Length = 348
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 161/236 (68%), Gaps = 3/236 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL A+ Q+ DFGK S++ L VI TG++ LD+ALG+GG+P+GR++
Sbjct: 1 MDKIKALESAMRQIEKDFGKGSIMKLGEAAAKMNVEVIPTGAISLDVALGVGGVPRGRVI 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALHVI EAQK GG A++D E+ALDP A+ +G+D +NLLI+QPD
Sbjct: 61 EIYGPESSGKTTVALHVIAEAQKKGGIAAFIDAEHALDPVYAKKLGVDIDNLLISQPDHG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG+IDVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ +
Sbjct: 121 EQALEIADALVRSGAIDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGII 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
+S T IF+NQ+R K G G E T+GG ALKFYA++RL + RT K+ +
Sbjct: 181 SKSRTTAIFINQIR--EKVGVMFGN-PETTTGGRALKFYASVRLEVRRTESIKVGN 233
>gi|444299278|emb|CCP29588.1| recombinase A, partial [Rhizobium pusense]
gi|444299280|emb|CCP29589.1| recombinase A, partial [Rhizobium pusense]
Length = 319
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 122/236 (51%), Positives = 161/236 (68%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 233
>gi|357975507|ref|ZP_09139478.1| recombinase A [Sphingomonas sp. KC8]
Length = 357
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 125/241 (51%), Positives = 166/241 (68%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M + AL AL+Q+ FGK S + L GSR ISTGSL LD+ALGIGGLP+G
Sbjct: 17 MDRQKALEAALAQIDRAFGKGSAMKL----GSREKIEIESISTGSLGLDIALGIGGLPRG 72
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVE++G E+SGKTTLALHVI EAQK GG A++D E+ALDP A +G+D + L+++QP
Sbjct: 73 RIVEVFGPESSGKTTLALHVIAEAQKAGGTAAFVDAEHALDPVYARKLGVDIDELIVSQP 132
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +S +IDV+V+DSVAAL+P+ EI + + Q+R+M+QALRKI
Sbjct: 133 DTGEQALEITDTLIRSNAIDVLVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKIT 192
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +S TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D
Sbjct: 193 GSISRSRTLVIFINQIRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRTGQIKDRDD 249
Query: 301 V 301
+
Sbjct: 250 I 250
>gi|338738241|ref|YP_004675203.1| recombinase A [Hyphomicrobium sp. MC1]
gi|337758804|emb|CCB64629.1| recombinase A [Hyphomicrobium sp. MC1]
Length = 377
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 122/231 (52%), Positives = 164/231 (70%), Gaps = 10/231 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M K AL AL+Q+ FGK S++ L G+ ISTGSL LD+ALGIGGLPKG
Sbjct: 14 MDKKQALEQALAQIDKTFGKGSIMRL----GANEKLDIEAISTGSLGLDIALGIGGLPKG 69
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+E+YG E+SGKTTLAL VI E+QK GG CA++D E+A+DP A+ +G+ E+LLI+QP
Sbjct: 70 RIIEVYGPESSGKTTLALQVIAESQKKGGVCAFVDAEHAIDPGYAKKLGVKVEDLLISQP 129
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+VVDSVAAL PK E+ + AQ+R+M+QALRK+
Sbjct: 130 DTGEQALEIADTLVRSGAIDVLVVDSVAALTPKAELEGEMGEATMGAQARLMSQALRKLT 189
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
S+ +++T++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 190 ASISRANTMVIFINQIRM--KIGIMFGN-PETTTGGNALKFYASVRLDIRR 237
>gi|148887243|emb|CAM12788.1| recombinase A [Ochrobactrum intermedium]
Length = 299
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 123/229 (53%), Positives = 160/229 (69%), Gaps = 3/229 (1%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIVEIYG E+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH I EAQ GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTIAEAQXKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+ ++IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNCMVIF 182
Query: 253 LNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 INQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 228
>gi|49474376|ref|YP_032418.1| recombinase A [Bartonella quintana str. Toulouse]
gi|59798256|sp|Q6FZF0.1|RECA_BARQU RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|49239880|emb|CAF26278.1| recA protein [Bartonella quintana str. Toulouse]
Length = 347
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 162/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRVGSIKDRDMI 235
>gi|207366328|emb|CAQ58059.1| recombinase A [Agrobacterium tumefaciens]
gi|207366330|emb|CAQ58060.1| recombinase A [Agrobacterium tumefaciens]
gi|207366332|emb|CAQ58061.1| recombinase A [Agrobacterium tumefaciens]
gi|207366334|emb|CAQ58062.1| recombinase A [Agrobacterium tumefaciens]
gi|207366336|emb|CAQ58063.1| recombinase A [Agrobacterium tumefaciens]
gi|207366338|emb|CAQ58064.1| recombinase A [Agrobacterium tumefaciens]
gi|207366340|emb|CAQ58065.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 122/240 (50%), Positives = 163/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 237
>gi|444299296|emb|CCP29597.1| recombinase A, partial [Agrobacterium rubi]
Length = 284
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 122/229 (53%), Positives = 159/229 (69%), Gaps = 3/229 (1%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L ISTGSL LD+ALGIGGLPKGRI+EIYG E+SG
Sbjct: 3 ALSQIERSFGKGSIMKLGSNESIVEVETISTGSLSLDVALGIGGLPKGRIIEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLAL I EAQK GG CA++D E+ALDP A +G+D NLLI+QPD+ E L + DT
Sbjct: 63 KTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLHNLLISQPDTGEQALEITDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+ +S T++IF
Sbjct: 123 LVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSKTMVIF 182
Query: 253 LNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+NQ+R K G G EVT+GGNALKFYA++RL + R K ++V
Sbjct: 183 INQIRM--KIGISYGS-PEVTTGGNALKFYASVRLDIRRIGAVKDREEV 228
>gi|254427618|ref|ZP_05041325.1| protein RecA [Alcanivorax sp. DG881]
gi|196193787|gb|EDX88746.1| protein RecA [Alcanivorax sp. DG881]
Length = 344
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 122/240 (50%), Positives = 167/240 (69%), Gaps = 10/240 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ + G R R P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 4 KGKALSAALSQIERQFGKGSVMRM----GDRKRERMPSISTGSLGLDVALGIGGLPKGRI 59
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI +AQK G CA++D E+ALDP AE +G++ ++L+++QPD+
Sbjct: 60 VEIYGPESSGKTTLTLSVIAQAQKKGATCAFVDAEHALDPDYAEKLGVNVDDLIVSQPDT 119
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DV++VDSVAAL+PK EI + + Q+R+M+QALRKI +
Sbjct: 120 GEQALEITDMLVRSGAVDVVIVDSVAALVPKAEIEGEMGDTHVGLQARLMSQALRKITGN 179
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+ ++TL++F+NQ+R K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 180 VKNANTLVVFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRIGAVKQGDEVT 236
>gi|403530664|ref|YP_006665193.1| recombinase A [Bartonella quintana RM-11]
gi|403232735|gb|AFR26478.1| recombinase A [Bartonella quintana RM-11]
Length = 347
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 162/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRVGSIKDRDMI 235
>gi|207366322|emb|CAQ58056.1| recombinase A [Agrobacterium tumefaciens]
gi|207366326|emb|CAQ58058.1| recombinase A [Agrobacterium tumefaciens]
gi|207366356|emb|CAQ58073.1| recombinase A [Agrobacterium tumefaciens]
gi|207366358|emb|CAQ58074.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 121/230 (52%), Positives = 158/230 (68%), Gaps = 3/230 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 181 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 227
>gi|197104451|ref|YP_002129828.1| recombinase A [Phenylobacterium zucineum HLK1]
gi|196477871|gb|ACG77399.1| recombinase A protein [Phenylobacterium zucineum HLK1]
Length = 361
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 123/245 (50%), Positives = 167/245 (68%), Gaps = 19/245 (7%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI-----STGSLKLDLALGIGGLPK 119
+K AL AL+Q+ FGK S++ L +G ++ STGSL LD+ALGIGGLPK
Sbjct: 15 EKQRALEAALAQIDRAFGKGSVMKL-----GDKGKIVEIESVSTGSLGLDMALGIGGLPK 69
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRIVEIYG E+SGKTTLALHV+ E QK GG A++D E+ALDPS A +G++ ++LL+AQ
Sbjct: 70 GRIVEIYGPESSGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAHKLGVNLDDLLVAQ 129
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +S ++DVIVVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 130 PDTGEQALEITDTLVRSNAVDVIVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRM---DEVTSGGNALKFYAALRLRMMRTRLFK 296
S+ ++ TL+IF+NQ+R +G M E T+GGNALKFYA++RL + RT K
Sbjct: 190 TASISKAKTLVIFINQIRMK------IGVMYGSPETTTGGNALKFYASVRLDIRRTGSVK 243
Query: 297 IADKV 301
D++
Sbjct: 244 QRDEI 248
>gi|34497062|ref|NP_901277.1| recombinase A [Chromobacterium violaceum ATCC 12472]
gi|60393012|sp|Q7NXL9.1|RECA_CHRVO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|34102919|gb|AAQ59283.1| RecA protein [Chromobacterium violaceum ATCC 12472]
Length = 350
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 119/226 (52%), Positives = 160/226 (70%), Gaps = 3/226 (1%)
Query: 76 QLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTT 135
Q+ FGK S++ + + VISTGSL LDLALG+GGLP+GR+VEIYG E+SGKTT
Sbjct: 16 QIEKQFGKGSIMRMSDNQITENLQVISTGSLTLDLALGVGGLPRGRVVEIYGPESSGKTT 75
Query: 136 LALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTK 195
L L + EAQKLGG CAY+D ENALDP A+ +G++ E+LLI+QPD+ E L + D L +
Sbjct: 76 LCLQAVAEAQKLGGTCAYIDAENALDPVYAQKLGVNVEDLLISQPDTGEQALEICDMLVR 135
Query: 196 SGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQ 255
S +DVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ +++TL+IF+NQ
Sbjct: 136 SSGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRTNTLVIFINQ 195
Query: 256 VRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 196 IRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGGIKKGDEV 238
>gi|319408737|emb|CBI82394.1| RecA protein [Bartonella schoenbuchensis R1]
Length = 347
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 163/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKTKALDSALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+ E+LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKSGGVCAFVDAEHALDPIYARKLGVKLEDLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG+IDV+VVDSVAAL P+ EI +N Q+R+M++ALRK+ S+
Sbjct: 121 EQALEIAETLVRSGAIDVLVVDSVAALTPRAEIDGEMNDSVPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRVGAIKDRDMV 235
>gi|163759602|ref|ZP_02166687.1| recombinase A [Hoeflea phototrophica DFL-43]
gi|162283199|gb|EDQ33485.1| recombinase A [Hoeflea phototrophica DFL-43]
Length = 360
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 123/243 (50%), Positives = 163/243 (67%), Gaps = 3/243 (1%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ K + K AL ALSQ+ FGK S++ L I TGSL LD+ALG+GGLPK
Sbjct: 10 EEKSVDKSKALDAALSQIERSFGKGSIMKLGANESVVEIETIPTGSLGLDIALGVGGLPK 69
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+EIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI+Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQ 129
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGALDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D
Sbjct: 190 TASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKERD 246
Query: 300 KVN 302
+V
Sbjct: 247 EVT 249
>gi|148897679|emb|CAM18493.1| recombinase A [Ochrobactrum intermedium]
Length = 299
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 124/229 (54%), Positives = 159/229 (69%), Gaps = 3/229 (1%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIVEIYG E+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALR + S+ +S L+IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRTLTASISRSGCLVIF 182
Query: 253 LNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 INQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 228
>gi|148887237|emb|CAM12785.1| recombinase A [Ochrobactrum sp. TK 14]
Length = 299
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 122/229 (53%), Positives = 161/229 (70%), Gaps = 3/229 (1%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV+IYG E+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVKIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG+IDV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+ ++IF
Sbjct: 123 LVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNCMVIF 182
Query: 253 LNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 INQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 228
>gi|302389774|ref|YP_003825595.1| recombinase A [Thermosediminibacter oceani DSM 16646]
gi|302200402|gb|ADL07972.1| RecA protein [Thermosediminibacter oceani DSM 16646]
Length = 343
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 114/239 (47%), Positives = 167/239 (69%), Gaps = 3/239 (1%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+M+K AL +AL+Q+ FGK S++ L VI TG+L LD+ALG+GG+P+GRI
Sbjct: 1 MMEKQKALEMALAQIERQFGKGSIMRLGEAESKFNVEVIPTGALPLDIALGVGGVPRGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTT+ALH++ EAQK GG A++D E+ALDP+ A +G+D +NLLI+QPD+
Sbjct: 61 IEIFGPESSGKTTVALHIVAEAQKAGGTAAFIDAEHALDPTYARKLGVDTDNLLISQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG++DVIV+DSVAAL+PK E+ + + Q+R+M+QALRK+ S
Sbjct: 121 GEQALEIAEALVRSGAVDVIVIDSVAALVPKAELEGEMGEAHVGLQARLMSQALRKLAGS 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S T+ IF+NQ+R K G G E T GG ALKFYA++R+ + +T + K + V
Sbjct: 181 ISKSKTVAIFINQLR--EKVGVMFGN-PETTPGGRALKFYASVRMEVRKTSVIKDGENV 236
>gi|307945635|ref|ZP_07660971.1| protein RecA [Roseibium sp. TrichSKD4]
gi|307771508|gb|EFO30733.1| protein RecA [Roseibium sp. TrichSKD4]
Length = 355
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 165/238 (69%), Gaps = 4/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ + + V STGSL LD+ALGIGGLPKGRIV
Sbjct: 14 MDKTKALDAALSQIERAFGKGSIMRMGQGQAVEVQSV-STGSLGLDIALGIGGLPKGRIV 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+
Sbjct: 73 EIYGPESSGKTTLALHTVAEAQKTGGICAFVDAEHALDPIYARKLGVNIDDLLISQPDAG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+V+DSVAAL PK E+ + Q+R+M+QALRK+ S+
Sbjct: 133 EQALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGMQARLMSQALRKLTASI 192
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 193 SKSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIKDRDEV 247
>gi|328543179|ref|YP_004303288.1| recombinase A [Polymorphum gilvum SL003B-26A1]
gi|326412925|gb|ADZ69988.1| recombinase A [Polymorphum gilvum SL003B-26A1]
Length = 344
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 166/238 (69%), Gaps = 4/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLP+GRIV
Sbjct: 1 MDKTKALDAALSQIERAFGKGSIMRLGQGQAVEV-QTVSTGSLGLDIALGVGGLPRGRIV 59
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQKLGG CA++D E+ALDP A +G++ ++LLI+QPD+
Sbjct: 60 EIYGPESSGKTTLALHTIAEAQKLGGICAFIDAEHALDPVYARKLGVNIDDLLISQPDAG 119
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+I+V+V+DSVAAL PK E+ + Q+R+M+QALRK+ S+
Sbjct: 120 EQALEIADTLVRSGAIEVLVIDSVAALTPKAELEGEMGDSLPGMQARLMSQALRKLTASI 179
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 180 SKSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKDRDEV 234
>gi|300113490|ref|YP_003760065.1| recA protein [Nitrosococcus watsonii C-113]
gi|299539427|gb|ADJ27744.1| recA protein [Nitrosococcus watsonii C-113]
Length = 342
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 165/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL ALSQ+ FGK +++ L R VISTGSL LD+ALG+GGLP+GR+VEI
Sbjct: 5 RKKALGAALSQIEKQFGKGAVMRLGDASIVREVEVISTGSLGLDIALGVGGLPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G EASGKTTLAL V EAQ LGG A++D E+ALDP AE +G++ E+LL++QPD+ E
Sbjct: 65 FGPEASGKTTLALQVAAEAQALGGTAAFVDAEHALDPQYAERLGVNVEDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DV+V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIADMLVRSGAVDVVVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 185 SNTLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRVGALKKGDEI 237
>gi|344924247|ref|ZP_08777708.1| recombination protein [Candidatus Odyssella thessalonicensis L13]
gi|297717870|gb|ADI50078.1| RecA protein [Candidatus Odyssella thessalonicensis L13]
Length = 349
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 121/242 (50%), Positives = 169/242 (69%), Gaps = 16/242 (6%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ L G R +S+GSL LD+ALGIGG P+GRI
Sbjct: 6 KGKALDAALSQIERAFGKGSVMRL----GQRETVEIEALSSGSLGLDIALGIGGFPRGRI 61
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG E+SGKTTLALH + EAQK+GG CA++D E+ALDPS A +G++ +NL+I+QPD+
Sbjct: 62 IEIYGPESSGKTTLALHAVAEAQKVGGTCAFVDAEHALDPSYARKLGVNIDNLIISQPDT 121
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +SG+IDV++VDSVAAL+PK E+ + + Q+R+M+QALRK+ S
Sbjct: 122 GEQALEIADTLVRSGAIDVLIVDSVAALVPKAELEGDMGDSHMGLQARLMSQALRKLAGS 181
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRM---DEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
+ +++ ++IF+NQ+R Q +G M E T+GGNALKFYA++RL + R K D
Sbjct: 182 INKTNCMVIFINQIR------QKIGVMFGNPETTTGGNALKFYASVRLDIRRIGSIKDKD 235
Query: 300 KV 301
+V
Sbjct: 236 QV 237
>gi|344199960|ref|YP_004784286.1| protein recA [Acidithiobacillus ferrivorans SS3]
gi|343775404|gb|AEM47960.1| Protein recA [Acidithiobacillus ferrivorans SS3]
Length = 348
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 164/237 (69%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
Q+ AL ALSQ+ FGK +++ L + V STGSL LDLALG+GGLP+GR+VE
Sbjct: 4 QRSKALAAALSQIDKQFGKGAVMRLGDHNAIKDIAVYSTGSLGLDLALGVGGLPRGRVVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LHVI Q GG A++D E+ALDPS A +G+D ENLLI+QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHVIASCQAAGGTAAFIDAEHALDPSYAHKLGVDLENLLISQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++D+IV+DSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEIADMLVRSGAVDLIVIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANIS 183
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K +D+V
Sbjct: 184 RTNTLVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKKSDEV 237
>gi|357030598|ref|ZP_09092542.1| recombinase A [Gluconobacter morbifer G707]
gi|356415292|gb|EHH68935.1| recombinase A [Gluconobacter morbifer G707]
Length = 345
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 123/241 (51%), Positives = 170/241 (70%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL ALSQ+ FGK S++ + G R + VISTGSL LD+ALGIGG+P+G
Sbjct: 1 MDKTKALEGALSQIERAFGKGSIMRM----GQRPKEQADVISTGSLGLDIALGIGGMPRG 56
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALHV+ EAQK GG A++D E+ALDP A +G++ ++LL++QP
Sbjct: 57 RIVEIYGPESSGKTTLALHVLAEAQKKGGTVAFIDAEHALDPGYARKLGVNIDDLLLSQP 116
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 117 DAGEQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 176
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
++ +S+TL+IFLNQ+R K G G E T+GGNALKFY+++RL + R K D+
Sbjct: 177 GTVARSNTLVIFLNQIRM--KIGVMFGN-PETTTGGNALKFYSSIRLDIRRIGSIKDKDE 233
Query: 301 V 301
V
Sbjct: 234 V 234
>gi|406979549|gb|EKE01311.1| hypothetical protein ACD_21C00162G0004 [uncultured bacterium]
Length = 338
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 165/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL ALSQ+ FGK S++ L ++ V+STGSL LD+ALG GGLP+GR+VEI
Sbjct: 5 RKKALAAALSQIDKQFGKGSVMLLGEHESTKDIQVVSTGSLGLDIALGTGGLPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LHVI E QKLGG A++D E+ALDPS AE +G++ +LLI+QPD+ E
Sbjct: 65 YGPESSGKTTLTLHVIAECQKLGGTAAFIDAEHALDPSYAEKLGVNINDLLISQPDNGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +S ++D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIADMLVRSNAVDMVVIDSVAALTPKAEIEGEMGDQHMGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 185 SNTLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGSIKKGDEV 237
>gi|402851912|ref|ZP_10900035.1| RecA protein [Rhodovulum sp. PH10]
gi|402497811|gb|EJW09600.1| RecA protein [Rhodovulum sp. PH10]
Length = 365
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 118/238 (49%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL+Q+ FGK S++ L + +STGSL LD+ALGIGGLP+GR+V
Sbjct: 14 MDKTKALDAALTQIERAFGKGSIMRLGKGSKPIEIEAVSTGSLGLDIALGIGGLPRGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+
Sbjct: 74 EIFGPESSGKTTLALHCVAEAQKKGGICAFVDAEHALDPVYARKLGVNLDDLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLVIDSVAALVPRAELEGEMGDAQPGMQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T+++F+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 SRSNTMVVFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 248
>gi|393770443|ref|ZP_10358939.1| recA protein [Methylobacterium sp. GXF4]
gi|392724123|gb|EIZ81492.1| recA protein [Methylobacterium sp. GXF4]
Length = 363
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 121/235 (51%), Positives = 164/235 (69%), Gaps = 3/235 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ ALSQ+ FGK S++ L + + ISTGSL LD+ALG+GGLP+GR+VEI
Sbjct: 18 KSKAIDAALSQIERAFGKGSIMRLGKNDKVQEVETISTGSLGLDIALGVGGLPRGRVVEI 77
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+ E
Sbjct: 78 YGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQ 137
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 138 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGESQPGLQARLMSQALRKLTGSISR 197
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+
Sbjct: 198 SNCMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRISTLKDRDE 249
>gi|159184959|ref|NP_354855.2| RecA protein [Agrobacterium fabrum str. C58]
gi|335036228|ref|ZP_08529555.1| recombinase A [Agrobacterium sp. ATCC 31749]
gi|417633|sp|P33156.1|RECA_AGRT5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|159140237|gb|AAK87640.2| RecA protein [Agrobacterium fabrum str. C58]
gi|333792119|gb|EGL63489.1| recombinase A [Agrobacterium sp. ATCC 31749]
Length = 363
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 122/240 (50%), Positives = 163/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 248
>gi|388456113|ref|ZP_10138408.1| recombinase A [Fluoribacter dumoffii Tex-KL]
Length = 348
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 121/236 (51%), Positives = 164/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ + SR ISTGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KQKALSAALSQIERQFGKGSVMRMGDSNVSRDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QK+GG A++D E+ALDPS A+ +G++ + LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVNVDELLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +S ++DVI+VDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSAAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K +++
Sbjct: 185 SNTLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKKGEEI 237
>gi|260752406|ref|YP_003225299.1| recombinase A [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|258551769|gb|ACV74715.1| recA protein [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 354
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 124/241 (51%), Positives = 167/241 (69%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M K AL AL+Q+ FGK S++ L GSR IS+GSL LD+ALGIGGLP+G
Sbjct: 16 MDKQKALEAALAQIDRAFGKGSVMRL----GSREKIEIDTISSGSLGLDIALGIGGLPRG 71
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G++ ++L+++QP
Sbjct: 72 RIVEIYGHESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPVYAKKLGVNTDDLIVSQP 131
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +S ++D++VVDSVAAL P+ EI + + Q+R+M+QALRKI
Sbjct: 132 DTGEQALEITDTLIRSNAVDILVVDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKIT 191
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +S TL+IF+NQVR K G G E T+GGNALKFYA++RL + R K D+
Sbjct: 192 GSINRSQTLVIFINQVRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRVGQIKDRDE 248
Query: 301 V 301
+
Sbjct: 249 I 249
>gi|163868622|ref|YP_001609831.1| recombinase A [Bartonella tribocorum CIP 105476]
gi|189039590|sp|A9IVY9.1|RECA_BART1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|161018278|emb|CAK01836.1| RecA protein [Bartonella tribocorum CIP 105476]
Length = 347
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 162/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + + TGSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETVPTGSLSLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKGGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKDRDMI 235
>gi|262277415|ref|ZP_06055208.1| protein RecA [alpha proteobacterium HIMB114]
gi|262224518|gb|EEY74977.1| protein RecA [alpha proteobacterium HIMB114]
Length = 376
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 164/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL A+ Q+ +FGK S++ L + + ISTGSL LD+ALGIGGLPK RIVEI
Sbjct: 19 KQKALEAAIGQIDQNFGKGSVMKLGQKDQALDIEAISTGSLSLDIALGIGGLPKSRIVEI 78
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL VI EAQK GG CA++D E+ALDP+ A +G+D LLI+QPD+ E
Sbjct: 79 YGPESSGKTTLALQVIAEAQKTGGVCAFVDAEHALDPTYARKLGVDTSELLISQPDTGEQ 138
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++ V+VVDSVAAL P+ E+ + + Q+R+M+QALRK+ S+ +
Sbjct: 139 ALEIADTLVRSGAVSVLVVDSVAALTPRAELEGDMGDTHVGLQARLMSQALRKLTGSISK 198
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+T++IF+NQ+R K G G E T+GGNALKFY+++R+ + R K D++
Sbjct: 199 SNTMVIFINQIRM--KIGVMFGS-PETTAGGNALKFYSSVRMDIRRIGAIKEKDEI 251
>gi|61097691|emb|CAI38690.1| recombinase A [Chromobacterium violaceum]
gi|61097701|emb|CAI38695.1| recombinase A [Chromobacterium pseudoviolaceum]
Length = 285
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 119/226 (52%), Positives = 161/226 (71%), Gaps = 3/226 (1%)
Query: 76 QLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTT 135
Q+ FGK S++ + + VISTGSL LDLALG+GGLP+GR+VEIYG E+SGKTT
Sbjct: 1 QIEKQFGKGSIMRMSDNQITENLQVISTGSLSLDLALGVGGLPRGRVVEIYGPESSGKTT 60
Query: 136 LALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTK 195
L L V+ EAQKLGG CAY+D ENALDP A+ +G++ E+LLI+QPD+ E L + D L +
Sbjct: 61 LCLQVVAEAQKLGGTCAYIDAENALDPVYAQKLGVNVEDLLISQPDTGEQALEICDMLVR 120
Query: 196 SGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQ 255
S +DVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ +++TL+IF+NQ
Sbjct: 121 SSGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRTNTLVIFINQ 180
Query: 256 VRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+R K G G E T+GGNALKFYA++RL + RT K ++V
Sbjct: 181 IRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGGIKKGEEV 223
>gi|146424975|emb|CAM12596.1| recombinase A [Ochrobactrum anthropi]
Length = 299
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 125/234 (53%), Positives = 161/234 (68%), Gaps = 13/234 (5%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLALGIGGLPKGRIVEIYG 127
ALSQ+ FGK S++ L + PVI TGSL LD+ALG+GGLPKGRIVEIYG
Sbjct: 3 ALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIVEIYG 57
Query: 128 REASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLL 187
E+SGKTTLALH I EAQ GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L
Sbjct: 58 PESSGKTTLALHTIAEAQXKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQAL 117
Query: 188 SVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSH 247
+ DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+
Sbjct: 118 EITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSN 177
Query: 248 TLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 178 CMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 228
>gi|444299288|emb|CCP29593.1| recombinase A, partial [Agrobacterium fabrum]
Length = 321
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 121/236 (51%), Positives = 161/236 (68%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 233
>gi|395777979|ref|ZP_10458492.1| protein recA [Bartonella elizabethae Re6043vi]
gi|423715905|ref|ZP_17690126.1| protein recA [Bartonella elizabethae F9251]
gi|395418288|gb|EJF84615.1| protein recA [Bartonella elizabethae Re6043vi]
gi|395429207|gb|EJF95281.1| protein recA [Bartonella elizabethae F9251]
Length = 347
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 162/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + + TGSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETVPTGSLSLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKGGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKDRDMI 235
>gi|451940784|ref|YP_007461422.1| recombinase A [Bartonella australis Aust/NH1]
gi|451900171|gb|AGF74634.1| recombinase A [Bartonella australis Aust/NH1]
Length = 347
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 163/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + +STGSL LD+ALGIGGLPKGRI+
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETVSTGSLSLDIALGIGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I E QK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHSIAEIQKSGGVCAFIDAEHALDPVYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI ++ Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMSDSLPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIKDRDIV 235
>gi|395784151|ref|ZP_10463990.1| protein recA [Bartonella melophagi K-2C]
gi|395423906|gb|EJF90094.1| protein recA [Bartonella melophagi K-2C]
Length = 347
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 163/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKTKALDSALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+ E+LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFVDAEHALDPIYARKLGVKLEDLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG+IDV+VVDSVAAL P+ EI +N Q+R+M++ALRK+ S+
Sbjct: 121 EQALEIAETLVRSGAIDVLVVDSVAALTPRAEIDGEMNDSVPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 181 FRSNCMVIFINQIRI--KIGVMFGS-PETTTGGNALKFYASVRLDIRRVGAIKDRDMV 235
>gi|354951767|emb|CBL81077.2| recombinase A, partial [Agrobacterium sp. NCPPB 1650]
Length = 298
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 126/240 (52%), Positives = 165/240 (68%), Gaps = 8/240 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L ISTGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNESIVEVETISTGSLSLDVALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLHNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEI----GVPINGMYSDAQSRIMTQALRKIHY 241
L + DTL +SG++DV+V+DSVAAL P+ EI G + G+ + +R+M+QALRK+
Sbjct: 121 ALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARL-ARLMSQALRKLTA 179
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S T++IF+NQ+R K G G EVT+GGNALKFYA++RL + R K ++V
Sbjct: 180 SISKSKTMVIFINQIRM--KIGISYGS-PEVTTGGNALKFYASVRLDIRRIGAVKDREEV 236
>gi|61097689|emb|CAI28921.1| recombinase A [Chromobacterium violaceum]
gi|61097697|emb|CAI38693.1| recombinase A [Chromobacterium violaceum]
gi|61097711|emb|CAI38700.1| recombinase A [Chromobacterium violaceum]
Length = 285
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 119/226 (52%), Positives = 160/226 (70%), Gaps = 3/226 (1%)
Query: 76 QLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTT 135
Q+ FGK S++ + + VISTGSL LDLALG+GGLP+GR+VEIYG E+SGKTT
Sbjct: 1 QIEKQFGKGSIMRMSDNQITENLQVISTGSLTLDLALGVGGLPRGRVVEIYGPESSGKTT 60
Query: 136 LALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTK 195
L L + EAQKLGG CAY+D ENALDP A+ +G++ E+LLI+QPD+ E L + D L +
Sbjct: 61 LCLQAVAEAQKLGGTCAYIDAENALDPVYAQKLGVNVEDLLISQPDTGEQALEICDMLVR 120
Query: 196 SGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQ 255
S +DVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ +++TL+IF+NQ
Sbjct: 121 SSGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRTNTLVIFINQ 180
Query: 256 VRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 181 IRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGGIKKGDEV 223
>gi|451942153|ref|YP_007462790.1| recombinase A [Bartonella vinsonii subsp. berkhoffii str. Winnie]
gi|451901540|gb|AGF76002.1| recombinase A [Bartonella vinsonii subsp. berkhoffii str. Winnie]
Length = 347
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 162/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKAKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ +++F+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKDRDAI 235
>gi|188581876|ref|YP_001925321.1| recA protein [Methylobacterium populi BJ001]
gi|179345374|gb|ACB80786.1| recA protein [Methylobacterium populi BJ001]
Length = 366
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 164/235 (69%), Gaps = 3/235 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ AL+Q+ FGK S++ L + + +STGSL LD+ALG+GGLP+GR++EI
Sbjct: 21 KSKAIEAALTQIERAFGKGSIMRLGKTDKVQEVETVSTGSLGLDIALGVGGLPRGRVIEI 80
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+ E
Sbjct: 81 YGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQ 140
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 141 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGESQPGLQARLMSQALRKLTGSISR 200
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+
Sbjct: 201 SNCMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRVSTLKDRDE 252
>gi|407803080|ref|ZP_11149918.1| recA protein [Alcanivorax sp. W11-5]
gi|407022935|gb|EKE34684.1| recA protein [Alcanivorax sp. W11-5]
Length = 346
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/253 (49%), Positives = 171/253 (67%), Gaps = 17/253 (6%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ + G R+ P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 5 KSKALSAALSQIERQFGKGSVMRM----GDRKREPMPAISTGSLGLDVALGIGGLPKGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI +AQK G CA++D E+ALDP AE +G++ ++L+++QPD+
Sbjct: 61 VEIYGPESSGKTTLTLSVIAQAQKNGANCAFVDAEHALDPDYAEKLGVNVDDLIVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DV++VDSVAAL+PK EI + + Q+R+M+QALRKI S
Sbjct: 121 GEQALEITDMLVRSGAVDVVIVDSVAALVPKAEIEGEMGDHHVGVQARLMSQALRKITGS 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+ ++ L+IF+NQ+R K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 181 VKNANCLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRIGAVKQGDEV- 236
Query: 303 ILEVVNIGSMIRL 315
IGS R+
Sbjct: 237 ------IGSETRV 243
>gi|148553436|ref|YP_001261018.1| recombinase A [Sphingomonas wittichii RW1]
gi|148498626|gb|ABQ66880.1| recA protein [Sphingomonas wittichii RW1]
Length = 357
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/245 (50%), Positives = 169/245 (68%), Gaps = 10/245 (4%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGG 116
+A M + AL AL+Q+ FGK S + L GSR ISTGSL LD+ALGIGG
Sbjct: 13 EAANMDRQKALEAALAQIDRAFGKGSAMKL----GSRETMQVEAISTGSLGLDIALGIGG 68
Query: 117 LPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLL 176
LPKGR+VE++G E+SGKTTLALH I EAQK+GG A++D E+ALDP A+ +G++ + L+
Sbjct: 69 LPKGRVVEVFGPESSGKTTLALHAIAEAQKVGGTAAFIDAEHALDPVYAKKLGVNIDELI 128
Query: 177 IAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQAL 236
++QPD+ E L + DTL +S +IDV+V+DSVAAL+P+ EI + + Q+R+M+QAL
Sbjct: 129 VSQPDTGEQALEIADTLVRSNAIDVLVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQAL 188
Query: 237 RKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
RKI S+ +S L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K
Sbjct: 189 RKITGSISRSKCLVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRTGAIK 245
Query: 297 IADKV 301
D+V
Sbjct: 246 DRDEV 250
>gi|77164441|ref|YP_342966.1| DNA recombination protein RecA [Nitrosococcus oceani ATCC 19707]
gi|254433644|ref|ZP_05047152.1| protein RecA [Nitrosococcus oceani AFC27]
gi|76882755|gb|ABA57436.1| RecA protein [Nitrosococcus oceani ATCC 19707]
gi|207089977|gb|EDZ67248.1| protein RecA [Nitrosococcus oceani AFC27]
Length = 342
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 164/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL ALSQ+ FGK +++ L R VISTGSL LD+ALG+GGLP+GR+VEI
Sbjct: 5 RKKALGAALSQIEKQFGKGAVMRLGDASIVREVEVISTGSLGLDIALGVGGLPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G EASGKTTLAL V EAQ LGG A++D E+ALDP AE +G+ E+LL++QPD+ E
Sbjct: 65 FGPEASGKTTLALQVAAEAQALGGTAAFVDAEHALDPQYAERLGVSVEDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DV+V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIADMLVRSGAVDVVVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 185 SNTLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRVGALKKGDEI 237
>gi|444299292|emb|CCP29595.1| recombinase A, partial [Rhizobium nepotum]
gi|444299294|emb|CCP29596.1| recombinase A, partial [Rhizobium nepotum]
Length = 323
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/230 (52%), Positives = 158/230 (68%), Gaps = 3/230 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLP+GR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPRGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I E QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALQTIAECQKKGGICAFVDAEHALDPIYARKLGVDLQNLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 181 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 227
>gi|444299284|emb|CCP29591.1| recombinase A, partial [Agrobacterium genomosp. 7]
gi|444299286|emb|CCP29592.1| recombinase A, partial [Agrobacterium genomosp. 7]
Length = 319
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/236 (51%), Positives = 160/236 (67%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKEREEV 233
>gi|340027698|ref|ZP_08663761.1| recombinase A [Paracoccus sp. TRP]
Length = 356
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/243 (49%), Positives = 168/243 (69%), Gaps = 3/243 (1%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
+D + K AL AL+Q+ FGK S++ L STGSL LD+ALGIGGLP
Sbjct: 10 NDKRSADKQKALDSALAQIERQFGKGSIMRLGADSPVAEIEATSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRI+E++G E+SGKTTL LHV+ E QK GG CA++D E+ALDP A+ +G++ ++LLI+
Sbjct: 70 KGRIIEVFGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDDLLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VDTL +SG++ ++VVDSVAAL PK EI + M +Q+R+M+QA+RK
Sbjct: 130 QPDTGEQALEIVDTLVRSGAVSLVVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K
Sbjct: 190 LTASIGRSNCMVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDR 246
Query: 299 DKV 301
D+V
Sbjct: 247 DEV 249
>gi|398849140|ref|ZP_10605905.1| protein RecA [Pseudomonas sp. GM84]
gi|398244726|gb|EJN30268.1| protein RecA [Pseudomonas sp. GM84]
Length = 355
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+G P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQGIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|260574638|ref|ZP_05842641.1| recA protein [Rhodobacter sp. SW2]
gi|259023055|gb|EEW26348.1| recA protein [Rhodobacter sp. SW2]
Length = 360
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/238 (50%), Positives = 166/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGLPKGRI+
Sbjct: 15 MDKAKALESALAQIERQFGKGSIMKLGANSPAMDIESTSTGSLGLDIALGIGGLPKGRII 74
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LHV+ E QK GG CA++D E+ALDP A+ +G++ + LLI+QPD+
Sbjct: 75 EIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLISQPDTG 134
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L +VDTL +SG++ ++V+DSVAAL+PK EI + M +Q+R+M+QA+RK+ S+
Sbjct: 135 EQALEIVDTLVRSGAVSLVVIDSVAALVPKSEIEGDMGDMQMGSQARLMSQAMRKLTASI 194
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ +++F+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 195 GRSNCMVVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKDRDEV 249
>gi|49475766|ref|YP_033807.1| recombinase A [Bartonella henselae str. Houston-1]
gi|59798263|sp|Q6G2Z3.1|RECA_BARHE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|49238573|emb|CAF27814.1| recA protein [Bartonella henselae str. Houston-1]
Length = 347
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 162/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKIKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKDRDMI 235
>gi|170748646|ref|YP_001754906.1| recA protein [Methylobacterium radiotolerans JCM 2831]
gi|238688878|sp|B1LWT6.1|RECA_METRJ RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|170655168|gb|ACB24223.1| recA protein [Methylobacterium radiotolerans JCM 2831]
Length = 363
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 164/235 (69%), Gaps = 3/235 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ ALSQ+ FGK S++ L + + +STGSL LD+ALG+GGLP+GR++EI
Sbjct: 18 KSKAIDAALSQIERAFGKGSIMRLGKSDKVQEVETVSTGSLGLDIALGVGGLPRGRVIEI 77
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+ E
Sbjct: 78 YGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQ 137
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 138 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGESQPGLQARLMSQALRKLTGSISR 197
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+
Sbjct: 198 SNCMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRISTLKDRDE 249
>gi|220925348|ref|YP_002500650.1| recA protein [Methylobacterium nodulans ORS 2060]
gi|254790438|sp|B8IP29.1|RECA_METNO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|219949955|gb|ACL60347.1| recA protein [Methylobacterium nodulans ORS 2060]
Length = 363
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 164/235 (69%), Gaps = 3/235 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ AL+Q+ FGK S++ L + + ISTGSL LD+ALG+GGLP+GR++EI
Sbjct: 18 KSKAIDAALAQIERAFGKGSIMRLGKGDKVQEVETISTGSLGLDIALGVGGLPRGRVIEI 77
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+ E
Sbjct: 78 YGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQ 137
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 138 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDQQPGLQARLMSQALRKLTGSISR 197
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+
Sbjct: 198 SNCMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRVSTLKDRDE 249
>gi|212726671|gb|AAM50050.2| recombinase A [Zymomonas mobilis subsp. mobilis]
Length = 354
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/241 (51%), Positives = 167/241 (69%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M K AL AL+Q+ FGK S++ L GSR IS+GSL LD+ALGIGGLP+G
Sbjct: 16 MDKQKALEAALAQIDRAFGKGSVMRL----GSREKIEIDTISSGSLGLDIALGIGGLPRG 71
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G++ ++L+++QP
Sbjct: 72 RIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPVYAKKLGVNTDDLIVSQP 131
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +S ++D++VVDSVAAL P+ EI + + Q+R+M+QALRKI
Sbjct: 132 DTGEQALEITDTLIRSNAVDILVVDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKIT 191
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +S TL+IF+NQVR K G G E T+GGNALKFYA++RL + R K D+
Sbjct: 192 GSINRSQTLVIFINQVRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRVGQIKDRDE 248
Query: 301 V 301
+
Sbjct: 249 I 249
>gi|410942845|ref|ZP_11374586.1| recombinase A [Gluconobacter frateurii NBRC 101659]
Length = 344
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/241 (51%), Positives = 169/241 (70%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL ALSQ+ FGK S++ + G R + VISTGSL LD+ALGIGG+P+G
Sbjct: 1 MDKTKALEGALSQIERAFGKGSIMRM----GQRPKEQADVISTGSLGLDIALGIGGMPRG 56
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALHV+ EAQK GG A++D E+ALDP A +G++ + LL++QP
Sbjct: 57 RIVEIYGPESSGKTTLALHVLAEAQKKGGTVAFIDAEHALDPGYARKLGVNIDELLLSQP 116
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 117 DAGEQALEICDTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 176
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
++ +S+TL+IFLNQ+R K G G E T+GGNALKFY+++RL + R K D+
Sbjct: 177 GTVARSNTLVIFLNQIRM--KIGVMFGN-PETTTGGNALKFYSSIRLDIRRIGSIKDKDE 233
Query: 301 V 301
V
Sbjct: 234 V 234
>gi|237747401|ref|ZP_04577881.1| recA protein [Oxalobacter formigenes HOxBLS]
gi|229378752|gb|EEO28843.1| recA protein [Oxalobacter formigenes HOxBLS]
Length = 353
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/260 (47%), Positives = 175/260 (67%), Gaps = 13/260 (5%)
Query: 59 DDAKIM---QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIG 115
DD K +K+ AL +AL+Q+ FGK S++ + PV+STGSL LD+ALG+G
Sbjct: 2 DDNKTASNPEKNKALAIALAQIEKQFGKGSVMRMAPGVVVEEIPVVSTGSLGLDIALGVG 61
Query: 116 GLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENL 175
GLP+GR++EIYG E+SGKTTL L VI E QKLGG CA++D E+ALD A+ +G+ ++L
Sbjct: 62 GLPRGRVIEIYGPESSGKTTLTLQVIAEMQKLGGTCAFIDAEHALDVGYAQKLGVHLQDL 121
Query: 176 LIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQA 235
LI+QPD+ E L + D L +SG++D+IV+DSVAAL PK EI + Q+R+M+QA
Sbjct: 122 LISQPDTGEQALEITDALVRSGAVDLIVIDSVAALTPKAEIEGDMGDSLPGLQARLMSQA 181
Query: 236 LRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLF 295
LRK+ S+ +++T +IF+NQ+R K G G E T+GGNALKFY+++RL + RT
Sbjct: 182 LRKLTGSINKTNTSVIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRTGSI 238
Query: 296 KIADKVNILEVVNIGSMIRL 315
K +D+V IGS R+
Sbjct: 239 KSSDEV-------IGSETRV 251
>gi|421522612|ref|ZP_15969253.1| recombinase A [Pseudomonas putida LS46]
gi|402753712|gb|EJX14205.1| recombinase A [Pseudomonas putida LS46]
Length = 356
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+G P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 6 KKRALAAALGQIERQFGKGAVMRMGDH--ERQGIPAISTGSLGLDIALGIGGLPKGRIVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 64 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 124 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 183
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 184 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 237
>gi|283856414|ref|YP_162901.2| recombinase A [Zymomonas mobilis subsp. mobilis ZM4]
gi|384411101|ref|YP_005620466.1| recA protein [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|397676052|ref|YP_006517590.1| protein recA [Zymomonas mobilis subsp. mobilis ATCC 29191]
gi|292495071|sp|Q9X5D8.3|RECA_ZYMMO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|283775414|gb|AAV89790.2| recA protein [Zymomonas mobilis subsp. mobilis ZM4]
gi|335931475|gb|AEH62015.1| recA protein [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|395396741|gb|AFN56068.1| Protein recA [Zymomonas mobilis subsp. mobilis ATCC 29191]
Length = 354
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/241 (51%), Positives = 167/241 (69%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M K AL AL+Q+ FGK S++ L GSR IS+GSL LD+ALGIGGLP+G
Sbjct: 16 MDKQKALEAALAQIDRAFGKGSVMRL----GSREKIEIDTISSGSLGLDIALGIGGLPRG 71
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G++ ++L+++QP
Sbjct: 72 RIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPVYAKKLGVNTDDLIVSQP 131
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +S ++D++VVDSVAAL P+ EI + + Q+R+M+QALRKI
Sbjct: 132 DTGEQALEITDTLIRSNAVDILVVDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKIT 191
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +S TL+IF+NQVR K G G E T+GGNALKFYA++RL + R K D+
Sbjct: 192 GSINRSQTLVIFINQVRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRVGQIKDRDE 248
Query: 301 V 301
+
Sbjct: 249 I 249
>gi|422664940|ref|ZP_16724813.1| recombinase A [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|330975359|gb|EGH75425.1| recombinase A [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 354
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|292491237|ref|YP_003526676.1| recA protein [Nitrosococcus halophilus Nc4]
gi|291579832|gb|ADE14289.1| recA protein [Nitrosococcus halophilus Nc4]
Length = 342
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/236 (49%), Positives = 167/236 (70%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL ALSQ+ FGK +++ L R VISTGSL LD+ALG+GGLP+GR+VEI
Sbjct: 5 RKKALGAALSQIEKQFGKGAVMRLGDANTVRGVEVISTGSLGLDIALGVGGLPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G EASGKTTLAL V+ EAQK+GG A++D E+ALDP AE +G++ ++LL++QPD+ E
Sbjct: 65 FGPEASGKTTLALQVVAEAQKVGGTAAFVDAEHALDPQYAEKLGVNVDDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DV+V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIADMLVRSGAVDVVVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+TL++F+NQ+R K G G E T+GGNALKFYA++RL + R K +++
Sbjct: 185 SNTLVVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRVGSLKKGEEI 237
>gi|170738641|ref|YP_001767296.1| recA protein [Methylobacterium sp. 4-46]
gi|238688062|sp|B0UGP0.1|RECA_METS4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|168192915|gb|ACA14862.1| recA protein [Methylobacterium sp. 4-46]
Length = 363
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 164/235 (69%), Gaps = 3/235 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ AL+Q+ FGK S++ L + + ISTGSL LD+ALG+GGLP+GR++EI
Sbjct: 18 KSKAIDAALAQIERAFGKGSIMRLGKGDKVQEVETISTGSLGLDVALGVGGLPRGRVIEI 77
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+ E
Sbjct: 78 YGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQ 137
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 138 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDQQPGLQARLMSQALRKLTGSISR 197
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+
Sbjct: 198 SNCMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRVSTLKDRDE 249
>gi|414341531|ref|YP_006983052.1| recombinase A [Gluconobacter oxydans H24]
gi|411026866|gb|AFW00121.1| RecA [Gluconobacter oxydans H24]
Length = 344
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/241 (51%), Positives = 169/241 (70%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL ALSQ+ FGK S++ + G R + VISTGSL LD+ALGIGG+P+G
Sbjct: 1 MDKTKALEGALSQIERAFGKGSIMRM----GQRPKEQADVISTGSLGLDIALGIGGMPRG 56
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALHV+ EAQK GG A++D E+ALDP A +G++ + LL++QP
Sbjct: 57 RIVEIYGPESSGKTTLALHVLAEAQKKGGTVAFIDAEHALDPGYARKLGVNIDELLLSQP 116
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 117 DAGEQALEICDTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 176
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
++ +S+TL+IFLNQ+R K G G E T+GGNALKFY+++RL + R K D+
Sbjct: 177 GTVSRSNTLVIFLNQIRM--KIGVMFGN-PETTTGGNALKFYSSIRLDIRRIGSIKDKDE 233
Query: 301 V 301
V
Sbjct: 234 V 234
>gi|408483477|ref|ZP_11189696.1| recombinase A [Pseudomonas sp. R81]
gi|423690263|ref|ZP_17664783.1| RecA protein [Pseudomonas fluorescens SS101]
gi|387998220|gb|EIK59549.1| RecA protein [Pseudomonas fluorescens SS101]
Length = 352
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|335043023|ref|ZP_08536050.1| recA/RadA recombinase [Methylophaga aminisulfidivorans MP]
gi|333789637|gb|EGL55519.1| recA/RadA recombinase [Methylophaga aminisulfidivorans MP]
Length = 346
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 164/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL Q+ FGK S++ L +R +S+GS+ LD+ALGIGGLP+GRIVEI
Sbjct: 5 KKKALGAALGQIEKQFGKGSVMRLGDNAAARDVSAVSSGSIGLDIALGIGGLPRGRIVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LH I E QKLGG A++D E+ALDP AE +G++ ++LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLHAIAEMQKLGGTAAFVDAEHALDPVYAEKLGVNIDDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D++VVDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 185 SNTLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKKGDEI 237
>gi|312959310|ref|ZP_07773827.1| RecA [Pseudomonas fluorescens WH6]
gi|311286027|gb|EFQ64591.1| RecA [Pseudomonas fluorescens WH6]
Length = 352
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|207366350|emb|CAQ58070.1| recombinase A [Agrobacterium tumefaciens]
Length = 316
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/234 (52%), Positives = 159/234 (67%), Gaps = 3/234 (1%)
Query: 68 NALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYG 127
AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIVEIYG
Sbjct: 1 KALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIVEIYG 60
Query: 128 REASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLL 187
E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD+ E L
Sbjct: 61 PESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQAL 120
Query: 188 SVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSH 247
+ DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S
Sbjct: 121 EITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSK 180
Query: 248 TLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 CMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 231
>gi|395496840|ref|ZP_10428419.1| recombinase A [Pseudomonas sp. PAMC 25886]
Length = 352
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|344344513|ref|ZP_08775375.1| Protein recA [Marichromatium purpuratum 984]
gi|343803920|gb|EGV21824.1| Protein recA [Marichromatium purpuratum 984]
Length = 344
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 164/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL AL+Q+ FGK S++ + R ISTGSL LD+ALGIGGLPKGR+VEI
Sbjct: 5 RKKALAAALTQIEKQFGKGSVMRMGDAGAVRNIEAISTGSLGLDIALGIGGLPKGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LHV+ E QKLGG A++D E+ALDP AE +G+ E+LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLHVVAEVQKLGGTAAFVDAEHALDPVYAEKLGVQMEDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DV++VDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSGAVDVVIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ L++F+NQ+R K G G E T+GGNALKFY+++RL + R K +D+V
Sbjct: 185 SNCLVVFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGSLKKSDEV 237
>gi|440737262|ref|ZP_20916834.1| recombinase A [Pseudomonas fluorescens BRIP34879]
gi|447915570|ref|YP_007396138.1| recombinase A [Pseudomonas poae RE*1-1-14]
gi|440382241|gb|ELQ18746.1| recombinase A [Pseudomonas fluorescens BRIP34879]
gi|445199433|gb|AGE24642.1| recombinase A [Pseudomonas poae RE*1-1-14]
Length = 352
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|453328282|dbj|GAC89411.1| DNA recombinase RecA [Gluconobacter thailandicus NBRC 3255]
Length = 344
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/241 (51%), Positives = 169/241 (70%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL ALSQ+ FGK S++ + G R + VISTGSL LD+ALGIGG+P+G
Sbjct: 1 MDKTKALEGALSQIERAFGKGSIMRM----GQRPKEQADVISTGSLGLDIALGIGGMPRG 56
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALHV+ EAQK GG A++D E+ALDP A +G++ + LL++QP
Sbjct: 57 RIVEIYGPESSGKTTLALHVLAEAQKKGGTVAFIDAEHALDPGYARKLGVNIDELLLSQP 116
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 117 DAGEQALEICDTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 176
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
++ +S+TL+IFLNQ+R K G G E T+GGNALKFY+++RL + R K D+
Sbjct: 177 GTVSRSNTLVIFLNQIRM--KIGVMFGN-PETTTGGNALKFYSSIRLDIRRIGSIKDKDE 233
Query: 301 V 301
V
Sbjct: 234 V 234
>gi|11387037|sp|Q9RDU0.1|RECA_PSETO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|6689065|emb|CAB65373.1| recombination enzyme [Pseudomonas tolaasii]
Length = 352
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|283481767|emb|CBA10138.1| recombinase A [Agrobacterium tumefaciens]
Length = 317
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/234 (52%), Positives = 159/234 (67%), Gaps = 3/234 (1%)
Query: 68 NALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYG 127
AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIVEIYG
Sbjct: 2 KALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIVEIYG 61
Query: 128 REASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLL 187
E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD+ E L
Sbjct: 62 PESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQAL 121
Query: 188 SVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSH 247
+ DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S
Sbjct: 122 EITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSK 181
Query: 248 TLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 182 CMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 232
>gi|4768851|gb|AAD29645.1|AF124757_5 RecA protein [Zymomonas mobilis subsp. mobilis ZM4]
Length = 339
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/241 (51%), Positives = 167/241 (69%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M K AL AL+Q+ FGK S++ L GSR IS+GSL LD+ALGIGGLP+G
Sbjct: 1 MDKQKALEAALAQIDRAFGKGSVMRL----GSREKIEIDTISSGSLGLDIALGIGGLPRG 56
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G++ ++L+++QP
Sbjct: 57 RIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPVYAKKLGVNTDDLIVSQP 116
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +S ++D++VVDSVAAL P+ EI + + Q+R+M+QALRKI
Sbjct: 117 DTGEQALEITDTLIRSNAVDILVVDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKIT 176
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +S TL+IF+NQVR K G G E T+GGNALKFYA++RL + R K D+
Sbjct: 177 GSINRSQTLVIFINQVRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRVGQIKDRDE 233
Query: 301 V 301
+
Sbjct: 234 I 234
>gi|26988361|ref|NP_743786.1| recombinase A [Pseudomonas putida KT2440]
gi|148549294|ref|YP_001269396.1| recombinase A [Pseudomonas putida F1]
gi|386013498|ref|YP_005931775.1| recombinase A [Pseudomonas putida BIRD-1]
gi|395444994|ref|YP_006385247.1| recombinase A [Pseudomonas putida ND6]
gi|397697716|ref|YP_006535599.1| Protein recA [Pseudomonas putida DOT-T1E]
gi|37537942|sp|Q88ME4.1|RECA_PSEPK RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|166220669|sp|A5W7V2.1|RECA_PSEP1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|24983113|gb|AAN67250.1|AE016352_3 recA protein [Pseudomonas putida KT2440]
gi|148513352|gb|ABQ80212.1| RecA protein [Pseudomonas putida F1]
gi|313500204|gb|ADR61570.1| RecA [Pseudomonas putida BIRD-1]
gi|388558991|gb|AFK68132.1| recombinase A [Pseudomonas putida ND6]
gi|397334446|gb|AFO50805.1| Protein recA [Pseudomonas putida DOT-T1E]
Length = 355
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+G P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQGIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|372271417|ref|ZP_09507465.1| recombinase A [Marinobacterium stanieri S30]
Length = 347
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 165/238 (69%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
+ AL ALSQ+ FGK +++ R R P +STGSL LD+ALGIGGLP GR+V
Sbjct: 5 RKKALDAALSQIERQFGKGAVM---RMGDQPREAIPSVSTGSLGLDIALGIGGLPFGRVV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI EAQK G CA++D E+ALDP AE +G+D + LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLQVIAEAQKQGKTCAFVDAEHALDPVYAEKLGVDVDALLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D LT+SG++DVI+VDSVAAL+PK EI + + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEITDMLTRSGAVDVIIVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGSV 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
QS+ L++F+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 KQSNCLLVFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAVKQGDEV 236
>gi|66044626|ref|YP_234467.1| recombinase A [Pseudomonas syringae pv. syringae B728a]
gi|289674623|ref|ZP_06495513.1| recombinase A [Pseudomonas syringae pv. syringae FF5]
gi|302187192|ref|ZP_07263865.1| recombinase A [Pseudomonas syringae pv. syringae 642]
gi|422616512|ref|ZP_16685218.1| recombinase A [Pseudomonas syringae pv. japonica str. M301072]
gi|422628272|ref|ZP_16693481.1| recombinase A [Pseudomonas syringae pv. pisi str. 1704B]
gi|422638246|ref|ZP_16701677.1| recombinase A [Pseudomonas syringae Cit 7]
gi|422671183|ref|ZP_16730549.1| recombinase A [Pseudomonas syringae pv. aceris str. M302273]
gi|424066571|ref|ZP_17804035.1| recA protein [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|424071225|ref|ZP_17808651.1| recA protein [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|440720448|ref|ZP_20900866.1| recombinase A [Pseudomonas syringae BRIP34876]
gi|440726576|ref|ZP_20906829.1| recombinase A [Pseudomonas syringae BRIP34881]
gi|440744167|ref|ZP_20923471.1| recombinase A [Pseudomonas syringae BRIP39023]
gi|443644969|ref|ZP_21128819.1| Recombinase RecA [Pseudomonas syringae pv. syringae B64]
gi|76363338|sp|Q4ZWP3.1|RECA_PSEU2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|63255333|gb|AAY36429.1| RecA protein [Pseudomonas syringae pv. syringae B728a]
gi|298157248|gb|EFH98333.1| RecA protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|330896096|gb|EGH28317.1| recombinase A [Pseudomonas syringae pv. japonica str. M301072]
gi|330936774|gb|EGH40938.1| recombinase A [Pseudomonas syringae pv. pisi str. 1704B]
gi|330950641|gb|EGH50901.1| recombinase A [Pseudomonas syringae Cit 7]
gi|330968923|gb|EGH68989.1| recombinase A [Pseudomonas syringae pv. aceris str. M302273]
gi|407999158|gb|EKG39545.1| recA protein [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|408002170|gb|EKG42433.1| recA protein [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|429843318|gb|AGA16514.1| RecA [Pseudomonas syringae pv. syringae]
gi|429843324|gb|AGA16517.1| RecA [Pseudomonas syringae pv. syringae]
gi|440365973|gb|ELQ03060.1| recombinase A [Pseudomonas syringae BRIP34876]
gi|440366158|gb|ELQ03243.1| recombinase A [Pseudomonas syringae BRIP34881]
gi|440374181|gb|ELQ10917.1| recombinase A [Pseudomonas syringae BRIP39023]
gi|443284986|gb|ELS43991.1| Recombinase RecA [Pseudomonas syringae pv. syringae B64]
Length = 354
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|229588727|ref|YP_002870846.1| recombinase A [Pseudomonas fluorescens SBW25]
gi|259563341|sp|C3KDG0.1|RECA_PSEFS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|229360593|emb|CAY47450.1| recombinase A [Pseudomonas fluorescens SBW25]
Length = 352
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|387892385|ref|YP_006322682.1| recombinase A [Pseudomonas fluorescens A506]
gi|387160632|gb|AFJ55831.1| RecA protein [Pseudomonas fluorescens A506]
Length = 352
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|333899523|ref|YP_004473396.1| protein recA [Pseudomonas fulva 12-X]
gi|333114788|gb|AEF21302.1| Protein recA [Pseudomonas fulva 12-X]
Length = 349
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLQVIAEAQKAGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|90020935|ref|YP_526762.1| recombinase A [Saccharophagus degradans 2-40]
gi|123277374|sp|Q21L79.1|RECA_SACD2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|89950535|gb|ABD80550.1| recA protein [Saccharophagus degradans 2-40]
Length = 348
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/236 (52%), Positives = 164/236 (69%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK +++ L G + P ISTGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALEAALSQIDRQFGKGTVMRLGDK-GREKMPAISTGSLGLDVALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI EAQ+ GG CA++D E+ALDP AE +G++ ++L+I+QPD+ E
Sbjct: 64 YGPESSGKTTLTLQVIAEAQRQGGTCAFVDAEHALDPVYAEKLGVNVDDLIISQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L V D L +SG++DV+VVDSVAAL PK EI + + Q+R+M+QALRKI ++
Sbjct: 124 ALEVADMLVRSGAVDVLVVDSVAALTPKAEIEGDMGDHHVGLQARLMSQALRKITGNIKN 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L IF+NQ+R K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 184 ANCLAIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRIGSVKEGDEV 236
>gi|1092932|prf||2102240A recA gene
Length = 352
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|399521378|ref|ZP_10762118.1| Protein recA;Recombinase A [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399110616|emb|CCH38678.1| Protein recA;Recombinase A [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 347
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQKLG CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKLGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K ++V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGEEV 236
>gi|78485933|ref|YP_391858.1| recA protein [Thiomicrospira crunogena XCL-2]
gi|123741557|sp|Q31F89.1|RECA_THICR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|78364219|gb|ABB42184.1| RecA protein [Thiomicrospira crunogena XCL-2]
Length = 347
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/236 (49%), Positives = 164/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL Q+ FGK S++ + R +STGSL LD+ALGIGGLP+GR+VEI
Sbjct: 5 KKKALEAALGQIEKQFGKGSIMRMGDKGAIRDIDSVSTGSLGLDVALGIGGLPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LH I E QK+GG A++D E+ALDP AE +G+D +NLL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLHAIAEMQKMGGTAAFVDAEHALDPIYAEKLGVDIDNLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D+L +SG++D+++VDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDSLVRSGAVDIVIVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++TL+IF+NQ+R K G G E T+GGNALKFY+++RL + R K D++
Sbjct: 185 TNTLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRIGAIKKGDEI 237
>gi|388471152|ref|ZP_10145361.1| RecA protein [Pseudomonas synxantha BG33R]
gi|388007849|gb|EIK69115.1| RecA protein [Pseudomonas synxantha BG33R]
Length = 352
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|266895|sp|Q01953.1|RECA_PSEFL RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|151530|gb|AAA25980.1| putative [Pseudomonas fluorescens]
Length = 352
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|388256999|ref|ZP_10134179.1| recombinase A [Cellvibrio sp. BR]
gi|387939203|gb|EIK45754.1| recombinase A [Cellvibrio sp. BR]
Length = 347
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/239 (50%), Positives = 167/239 (69%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL+ ALSQ+ FGK +++ + G + P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 5 KEKALQAALSQIERQFGKGTVMRM----GDKEQVAIPAISTGSLGLDVALGIGGLPKGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG E+SGKTTL L VI EAQ++GG CA++D E+ALDP A +G++ E+L+I+QPD+
Sbjct: 61 IEIYGPESSGKTTLTLQVIAEAQRMGGTCAFIDAEHALDPIYASKLGVNVEDLIISQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L V D L +SG++DV+VVDSVAAL P+ EI + + Q+R+M+QALRKI +
Sbjct: 121 GEQALEVTDMLVRSGAVDVLVVDSVAALTPRAEIEGEMGDHHVGLQARLMSQALRKITGN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ ++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 IKNANCLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGEEV 236
>gi|240850807|ref|YP_002972207.1| recombinase A [Bartonella grahamii as4aup]
gi|240267930|gb|ACS51518.1| recombinase A [Bartonella grahamii as4aup]
Length = 347
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 162/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + + TGSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETVPTGSLSLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKGGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ +++F+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKDRDAI 235
>gi|87199296|ref|YP_496553.1| recombinase A [Novosphingobium aromaticivorans DSM 12444]
gi|87134977|gb|ABD25719.1| recA protein [Novosphingobium aromaticivorans DSM 12444]
Length = 356
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/243 (51%), Positives = 167/243 (68%), Gaps = 10/243 (4%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLP 118
K M + AL AL+Q+ FGK S + L GS+ +STGSL LD+ALGIGGLP
Sbjct: 14 KDMDRQKALDAALAQIDRAFGKGSAMRL----GSKEAMQVEAVSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRI+EIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A +G+D +NL+++
Sbjct: 70 RGRIIEIYGPESSGKTTLALHAIAEAQKGGGTAAFIDAEHALDPVYARKLGVDIDNLIVS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+QALRK
Sbjct: 130 QPDTGEQALEITDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRK 189
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S ++IF+NQVR K G G E T+GGNALKFYA++RL + RT K
Sbjct: 190 LTGSISRSRCMVIFINQVRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRTGQIKDR 246
Query: 299 DKV 301
D++
Sbjct: 247 DEI 249
>gi|395795704|ref|ZP_10475007.1| recombinase A [Pseudomonas sp. Ag1]
gi|421138316|ref|ZP_15598381.1| recA protein [Pseudomonas fluorescens BBc6R8]
gi|395340164|gb|EJF72002.1| recombinase A [Pseudomonas sp. Ag1]
gi|404510484|gb|EKA24389.1| recA protein [Pseudomonas fluorescens BBc6R8]
Length = 352
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|170723191|ref|YP_001750879.1| recombinase A [Pseudomonas putida W619]
gi|229619922|sp|B1JDA2.1|RECA_PSEPW RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|169761194|gb|ACA74510.1| recA protein [Pseudomonas putida W619]
Length = 355
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R G P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERTGIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKSGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|395779782|ref|ZP_10460251.1| protein recA [Bartonella washoensis 085-0475]
gi|395420157|gb|EJF86442.1| protein recA [Bartonella washoensis 085-0475]
Length = 347
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 162/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKSGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTSAI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ +++F+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKDRDAI 235
>gi|306819658|ref|ZP_07453321.1| recombination protein A [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304552303|gb|EFM40231.1| recombination protein A [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 373
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/240 (50%), Positives = 164/240 (68%), Gaps = 2/240 (0%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
+++ K AL ALS + +FGK S++ L I TGS+ LD A+GIGG+PKGR
Sbjct: 12 EVVDKKKALDKALSDIQKEFGKGSIMLLGENT-KMNVEAIPTGSVGLDKAIGIGGVPKGR 70
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTT+ALH I EAQKLGG A++D E+ALDP A A+G+D ++LLI+QPD
Sbjct: 71 IVEIYGAESSGKTTIALHCIAEAQKLGGTAAFIDAEHALDPIYARALGVDIDSLLISQPD 130
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D+IVVDSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 131 TGEQALDITDTLVRSGALDIIVVDSVAALVPKTEIEGEMGDTFIGLQARLMSQALRKLTG 190
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ S T++IF+NQ+R + +G G E T+GG ALKFYA +RL + RT K D V
Sbjct: 191 HINWSKTVVIFINQLRSTISTGYAQGPT-ETTAGGRALKFYATVRLDVRRTGQLKQGDNV 249
>gi|422645684|ref|ZP_16708819.1| recombinase A [Pseudomonas syringae pv. maculicola str. ES4326]
gi|330959233|gb|EGH59493.1| recombinase A [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 354
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|20161605|dbj|BAB90525.1| putative RecA protein [Oryza sativa Japonica Group]
Length = 344
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 162/215 (75%)
Query: 87 LSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQK 146
+ L R G R PV+STGS LDLALG GGLPKGR++E+YG EASGKTTLALHVI EAQK
Sbjct: 1 MWLGRSEGRREVPVVSTGSFSLDLALGTGGLPKGRVIEVYGPEASGKTTLALHVIAEAQK 60
Query: 147 LGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDS 206
GGYCA++D E+ALDP+LAE++G++ NLL++QPD E LS+VDTL +SGS+DV+VVDS
Sbjct: 61 HGGYCAFVDAEHALDPALAESIGVNTSNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDS 120
Query: 207 VAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGL 266
VAAL+PK E+ + + Q+R+M+QALRK+ +SL S T+++F+NQ+R + G
Sbjct: 121 VAALVPKSELDGEMGDAHVALQARLMSQALRKLSHSLSLSQTILLFINQIRSKVTTFGGF 180
Query: 267 GRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
G EVTSGGNALKFYA++R+ + R L K ++
Sbjct: 181 GGPMEVTSGGNALKFYASVRMNIKRIGLVKKGEET 215
>gi|410089203|ref|ZP_11285829.1| recombinase A [Pseudomonas viridiflava UASWS0038]
gi|409763490|gb|EKN48450.1| recombinase A [Pseudomonas viridiflava UASWS0038]
Length = 354
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|167032243|ref|YP_001667474.1| recombinase A [Pseudomonas putida GB-1]
gi|189039602|sp|B0KT20.1|RECA_PSEPG RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|166858731|gb|ABY97138.1| recA protein [Pseudomonas putida GB-1]
Length = 355
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+G P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDQ--ERQGIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|423712844|ref|ZP_17687142.1| protein recA [Bartonella washoensis Sb944nv]
gi|395410540|gb|EJF77094.1| protein recA [Bartonella washoensis Sb944nv]
Length = 347
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 162/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKSGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTSAI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ +++F+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKDRDAI 235
>gi|254489873|ref|ZP_05103068.1| protein RecA [Methylophaga thiooxidans DMS010]
gi|224464958|gb|EEF81212.1| protein RecA [Methylophaga thiooxydans DMS010]
Length = 347
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/236 (48%), Positives = 164/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL Q+ FGK +++ + +R +STGS+ LD+ALGIGGLP+GR++EI
Sbjct: 5 KKKALGAALGQIEKQFGKGAVMRMGDAGAARDIAAVSTGSIGLDVALGIGGLPRGRVIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LH I E QK+GG A++D E+ALDP AE +G+D ++LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLHAIAEMQKMGGTAAFVDAEHALDPVYAEKLGVDIDDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D++VVDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 185 SNTLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKKGDEI 237
>gi|402309792|ref|ZP_10828765.1| RecA protein [Eubacterium sp. AS15]
gi|400370418|gb|EJP23403.1| RecA protein [Eubacterium sp. AS15]
Length = 374
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/240 (50%), Positives = 164/240 (68%), Gaps = 2/240 (0%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
+++ K AL ALS + +FGK S++ L I TGS+ LD A+GIGG+PKGR
Sbjct: 12 EVVDKKKALDKALSDIQKEFGKGSIMLLGENT-KMNVEAIPTGSVGLDKAIGIGGVPKGR 70
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTT+ALH I EAQKLGG A++D E+ALDP A A+G+D ++LLI+QPD
Sbjct: 71 IVEIYGAESSGKTTIALHCIAEAQKLGGTAAFIDAEHALDPIYARALGVDIDSLLISQPD 130
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D+IVVDSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 131 TGEQALDITDTLVRSGALDIIVVDSVAALVPKTEIEGEMGDTFIGLQARLMSQALRKLTG 190
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ S T++IF+NQ+R + +G G E T+GG ALKFYA +RL + RT K D V
Sbjct: 191 HINWSKTVVIFINQLRSTISTGYAQGPT-ETTAGGRALKFYATVRLDVRRTGQLKQGDNV 249
>gi|381201040|ref|ZP_09908171.1| recombinase A [Sphingobium yanoikuyae XLDN2-5]
Length = 341
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 124/241 (51%), Positives = 165/241 (68%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M + AL AL+Q+ FGK S + L GSR ISTGSL LD+ALGIGGLPKG
Sbjct: 1 MDRQKALEAALAQIDRAFGKGSAMKL----GSREKIEIESISTGSLGLDIALGIGGLPKG 56
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EIYG E+SGKTTL LH I EAQK GG A++D E+ALDP A+ +G+D + L+++QP
Sbjct: 57 RIIEIYGPESSGKTTLTLHAIAEAQKAGGTAAFVDAEHALDPIYAKKLGVDIDELIVSQP 116
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L +VDTL +S +ID++VVDSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 117 DTGEQALEIVDTLVRSNAIDILVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLT 176
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +S ++IF+NQVR K G G E T+GGNALKFYA++RL + RT K D
Sbjct: 177 GSIARSKCMVIFINQVRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRTGQIKDRDD 233
Query: 301 V 301
+
Sbjct: 234 I 234
>gi|78044103|ref|YP_360011.1| recA protein [Carboxydothermus hydrogenoformans Z-2901]
gi|77996218|gb|ABB15117.1| recA protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 343
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 119/250 (47%), Positives = 171/250 (68%), Gaps = 10/250 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL L +SQ+ FGK S++ L G + VI TGSL LDLALG+GG+P+GR+VEI
Sbjct: 4 KLKALELTISQIEKQFGKGSIMRLGENTGKFQVEVIPTGSLALDLALGVGGVPRGRVVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTT+ALH+I EAQK+GG A++D E+ALDP A+ +G+D ENLL++QPD+ E
Sbjct: 64 FGPESSGKTTVALHIIAEAQKMGGIAAFIDAEHALDPVYAQKLGVDIENLLVSQPDTGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + ++L +SG+IDVIV+DSVAAL+P+ EI + + Q+R+M+QALRK+ ++ +
Sbjct: 124 ALEIAESLVRSGAIDVIVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAISK 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNILE 305
S T+ IF+NQ+R K G G E T GG ALKFYA++R+ + + + K + +
Sbjct: 184 SKTVAIFINQMR--EKVGVMFGN-PETTPGGRALKFYASIRMDVRKIDVIKQGNDI---- 236
Query: 306 VVNIGSMIRL 315
IGS R+
Sbjct: 237 ---IGSRTRV 243
>gi|28871176|ref|NP_793795.1| recA protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213969154|ref|ZP_03397293.1| recombinase A [Pseudomonas syringae pv. tomato T1]
gi|301383952|ref|ZP_07232370.1| recombinase A [Pseudomonas syringae pv. tomato Max13]
gi|302064162|ref|ZP_07255703.1| recombinase A [Pseudomonas syringae pv. tomato K40]
gi|302134752|ref|ZP_07260742.1| recombinase A [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422297521|ref|ZP_16385156.1| recA protein [Pseudomonas avellanae BPIC 631]
gi|422586984|ref|ZP_16661655.1| recombinase A [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|422654855|ref|ZP_16717583.1| recombinase A [Pseudomonas syringae pv. actinidiae str. M302091]
gi|422657794|ref|ZP_16720233.1| recombinase A [Pseudomonas syringae pv. lachrymans str. M302278]
gi|37537940|sp|Q87XY7.1|RECA_PSESM RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|28854426|gb|AAO57490.1| recA protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213926152|gb|EEB59708.1| recombinase A [Pseudomonas syringae pv. tomato T1]
gi|330872692|gb|EGH06841.1| recombinase A [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|330967904|gb|EGH68164.1| recombinase A [Pseudomonas syringae pv. actinidiae str. M302091]
gi|331016403|gb|EGH96459.1| recombinase A [Pseudomonas syringae pv. lachrymans str. M302278]
gi|407991049|gb|EKG32993.1| recA protein [Pseudomonas avellanae BPIC 631]
Length = 354
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|237800182|ref|ZP_04588643.1| recombinase A [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331023039|gb|EGI03096.1| recombinase A [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 354
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|374261319|ref|ZP_09619903.1| RecA protein [Legionella drancourtii LLAP12]
gi|363538214|gb|EHL31624.1| RecA protein [Legionella drancourtii LLAP12]
Length = 348
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 164/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ + SR ISTGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KQKALSAALSQIERQFGKGSVMLMGDSSVSRDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QK+GG A++D E+ALDPS A+ +G++ + LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVNVDELLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +S ++DVI++DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSAAVDVIIIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K +++
Sbjct: 185 SNTLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKKGEEI 237
>gi|427408934|ref|ZP_18899136.1| protein recA [Sphingobium yanoikuyae ATCC 51230]
gi|425713244|gb|EKU76258.1| protein recA [Sphingobium yanoikuyae ATCC 51230]
Length = 356
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 124/241 (51%), Positives = 165/241 (68%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M + AL AL+Q+ FGK S + L GSR ISTGSL LD+ALGIGGLPKG
Sbjct: 16 MDRQKALEAALAQIDRAFGKGSAMKL----GSREKIEIESISTGSLGLDIALGIGGLPKG 71
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EIYG E+SGKTTL LH I EAQK GG A++D E+ALDP A+ +G+D + L+++QP
Sbjct: 72 RIIEIYGPESSGKTTLTLHAIAEAQKAGGTAAFVDAEHALDPIYAKKLGVDIDELIVSQP 131
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L +VDTL +S +ID++VVDSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 132 DTGEQALEIVDTLVRSNAIDILVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLT 191
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +S ++IF+NQVR K G G E T+GGNALKFYA++RL + RT K D
Sbjct: 192 GSIARSKCMVIFINQVRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRTGQIKDRDD 248
Query: 301 V 301
+
Sbjct: 249 I 249
>gi|54294688|ref|YP_127103.1| recombinase A [Legionella pneumophila str. Lens]
gi|59798134|sp|Q5WVQ0.1|RECA_LEGPL RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|53754520|emb|CAH16004.1| RecA protein [Legionella pneumophila str. Lens]
Length = 348
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 163/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ + SR ISTGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QK+GG A++D E+ALDPS A+ +G+ + LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +S ++DV+++DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K +++
Sbjct: 185 SNTLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKKGEEI 237
>gi|71737127|ref|YP_275943.1| recombinase A [Pseudomonas syringae pv. phaseolicola 1448A]
gi|257487044|ref|ZP_05641085.1| recombinase A [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|289625999|ref|ZP_06458953.1| recombinase A [Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|289651485|ref|ZP_06482828.1| recombinase A [Pseudomonas syringae pv. aesculi str. 2250]
gi|416025760|ref|ZP_11569408.1| recombinase A [Pseudomonas syringae pv. glycinea str. race 4]
gi|422404655|ref|ZP_16481706.1| recombinase A [Pseudomonas syringae pv. glycinea str. race 4]
gi|422583750|ref|ZP_16658870.1| recombinase A [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|422594838|ref|ZP_16669128.1| recombinase A [Pseudomonas syringae pv. lachrymans str. M301315]
gi|422609003|ref|ZP_16680962.1| recombinase A [Pseudomonas syringae pv. mori str. 301020]
gi|422679969|ref|ZP_16738242.1| recombinase A [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|123747565|sp|Q48F94.1|RECA_PSE14 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|71557680|gb|AAZ36891.1| recA protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320329643|gb|EFW85632.1| recombinase A [Pseudomonas syringae pv. glycinea str. race 4]
gi|330868577|gb|EGH03286.1| recombinase A [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330878036|gb|EGH12185.1| recombinase A [Pseudomonas syringae pv. glycinea str. race 4]
gi|330894630|gb|EGH27291.1| recombinase A [Pseudomonas syringae pv. mori str. 301020]
gi|330985145|gb|EGH83248.1| recombinase A [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331009316|gb|EGH89372.1| recombinase A [Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 354
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|218325541|emb|CAV24649.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/230 (52%), Positives = 157/230 (68%), Gaps = 3/230 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDXSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 181 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 227
>gi|52842028|ref|YP_095827.1| recombinase A [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|54297714|ref|YP_124083.1| recombinase A [Legionella pneumophila str. Paris]
gi|148359347|ref|YP_001250554.1| DNA recombination protein RecA [Legionella pneumophila str. Corby]
gi|296107394|ref|YP_003619094.1| recombination protein RecA [Legionella pneumophila 2300/99 Alcoy]
gi|378777663|ref|YP_005186101.1| recombinase A [Legionella pneumophila subsp. pneumophila ATCC
43290]
gi|397664255|ref|YP_006505793.1| DNA strand exchange and recombination protein [Legionella
pneumophila subsp. pneumophila]
gi|397667528|ref|YP_006509065.1| DNA strand exchange and recombination protein [Legionella
pneumophila subsp. pneumophila]
gi|59798138|sp|Q5X4B5.1|RECA_LEGPA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|59798152|sp|Q5ZUJ7.1|RECA_LEGPH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|166220654|sp|A5ICV8.1|RECA_LEGPC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|13186174|emb|CAC33484.1| RecA protein [Legionella pneumophila]
gi|52629139|gb|AAU27880.1| RecA bacterial DNA recombination protein [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|53751499|emb|CAH12917.1| RecA protein [Legionella pneumophila str. Paris]
gi|148281120|gb|ABQ55208.1| RecA bacterial DNA recombination protein [Legionella pneumophila
str. Corby]
gi|165968102|gb|ABY75873.1| RecA protein [Legionella pneumophila 2300/99 Alcoy]
gi|295649295|gb|ADG25142.1| recombination protein RecA [Legionella pneumophila 2300/99 Alcoy]
gi|307610503|emb|CBX00085.1| RecA protein [Legionella pneumophila 130b]
gi|364508478|gb|AEW52002.1| RecA bacterial DNA recombination protein [Legionella pneumophila
subsp. pneumophila ATCC 43290]
gi|395127666|emb|CCD05865.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Legionella pneumophila subsp.
pneumophila]
gi|395130939|emb|CCD09188.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Legionella pneumophila subsp.
pneumophila]
Length = 348
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 163/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ + SR ISTGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QK+GG A++D E+ALDPS A+ +G+ + LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +S ++DV+++DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K +++
Sbjct: 185 SNTLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKKGEEI 237
>gi|161728767|dbj|BAF94200.1| recombinase A [Pseudochrobactrum glaciei]
Length = 255
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 123/233 (52%), Positives = 162/233 (69%), Gaps = 4/233 (1%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL ALSQ+ FGK S++ L + + TGSL LD+ALG+GGLPKGRIVEIYG
Sbjct: 1 ALDAALSQIERQFGKGSIMRLGQSEVVEI-ETVPTGSLSLDIALGVGGLPKGRIVEIYGP 59
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D E+LLI+QPD+ E L
Sbjct: 60 ESSGKTTLALHTIAEAQKKGGMCAFVDAEHALDPVYARKLGVDLESLLISQPDTGEQALE 119
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ DTL +SG+IDV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+
Sbjct: 120 ITDTLVRSGAIDVLVIDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTASISRSNC 179
Query: 249 LIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 180 MVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIKDRDEV 229
>gi|61097693|emb|CAI38691.1| recombinase A [Chromobacterium violaceum]
gi|61097695|emb|CAI38692.1| recombinase A [Chromobacterium violaceum]
gi|61097699|emb|CAI38694.1| recombinase A [Chromobacterium violaceum]
gi|61097705|emb|CAI38697.1| recombinase A [Chromobacterium violaceum]
gi|61097709|emb|CAI38699.1| recombinase A [Chromobacterium violaceum]
Length = 285
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/226 (52%), Positives = 160/226 (70%), Gaps = 3/226 (1%)
Query: 76 QLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTT 135
Q+ FGK S++ + + VISTGSL LDLALG+GGLP+GR+VEIYG E+SGKTT
Sbjct: 1 QIEKQFGKGSIMRMSDNQITENLQVISTGSLTLDLALGVGGLPRGRVVEIYGPESSGKTT 60
Query: 136 LALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTK 195
L L + EAQKLGG CAY+D ENALDP A+ +G++ E+LLI+QPD+ E L + D L +
Sbjct: 61 LCLQAVAEAQKLGGTCAYIDAENALDPVYAQKLGVNVEDLLISQPDTGEQALEICDMLVR 120
Query: 196 SGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQ 255
S +DVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ +++TL+IF+NQ
Sbjct: 121 SSGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRTNTLVIFINQ 180
Query: 256 VRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+R K G G E T+GGNALKFYA++RL + RT K ++V
Sbjct: 181 IRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGGIKKGEEV 223
>gi|418054896|ref|ZP_12692951.1| Protein recA [Hyphomicrobium denitrificans 1NES1]
gi|353210478|gb|EHB75879.1| Protein recA [Hyphomicrobium denitrificans 1NES1]
Length = 377
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/235 (51%), Positives = 163/235 (69%), Gaps = 8/235 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGR 121
M K AL AL Q+ +FGK S++ R + + + I TGSL LD+ALGIGGLPKGR
Sbjct: 14 MDKKQALEHALQQIDKNFGKGSIM---RLGANEKVDIEAIPTGSLGLDIALGIGGLPKGR 70
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLALHV+ EAQK GG CA++D E+A+DP A+ +G+ E+LLI+QPD
Sbjct: 71 IIEIYGPESSGKTTLALHVVAEAQKRGGICAFVDAEHAIDPGYAKKLGVKVEDLLISQPD 130
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL PK E+ + Q+R+M+QALRK+
Sbjct: 131 TGEQALEIADTLVRSGAIDVLVVDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTG 190
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 191 SISKSKCMVIFINQIRM--KIGIMFGN-PETTTGGNALKFYASVRLDIRRIGQIK 242
>gi|389683198|ref|ZP_10174530.1| RecA protein [Pseudomonas chlororaphis O6]
gi|388552711|gb|EIM15972.1| RecA protein [Pseudomonas chlororaphis O6]
Length = 350
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIV+DSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVIDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|416018035|ref|ZP_11565036.1| recombinase A [Pseudomonas syringae pv. glycinea str. B076]
gi|320323085|gb|EFW79174.1| recombinase A [Pseudomonas syringae pv. glycinea str. B076]
Length = 354
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKIGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|94496514|ref|ZP_01303090.1| recA protein [Sphingomonas sp. SKA58]
gi|94423874|gb|EAT08899.1| recA protein [Sphingomonas sp. SKA58]
Length = 384
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 123/241 (51%), Positives = 166/241 (68%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M + AL AL+Q+ FGK S + L GSR ISTGSL LD+ALGIGGLPKG
Sbjct: 43 MDRQKALDAALAQIDRAFGKGSAMKL----GSREKIEIESISTGSLGLDIALGIGGLPKG 98
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EIYG E+SGKTTL LH I EAQK GG A++D E+ALDP+ A+ +G+D + L+++QP
Sbjct: 99 RIIEIYGPESSGKTTLTLHAIAEAQKAGGTAAFVDAEHALDPAYAKKLGVDIDELIVSQP 158
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L +VDTL +S +ID++V+DSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 159 DTGEQALEIVDTLVRSNAIDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLT 218
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +S ++IF+NQVR K G G E T+GGNALKFYA++RL + RT K D
Sbjct: 219 GSISRSKCMVIFINQVRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRTGQIKDRDD 275
Query: 301 V 301
+
Sbjct: 276 I 276
>gi|344943375|ref|ZP_08782662.1| Protein recA [Methylobacter tundripaludum SV96]
gi|344260662|gb|EGW20934.1| Protein recA [Methylobacter tundripaludum SV96]
Length = 345
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 165/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL Q+ FGK S++ + SR V+STGSL LD+ALG GGLP+GR++EI
Sbjct: 5 KKKALGAALMQIEKQFGKGSVMRMGDVAASRDIDVVSTGSLGLDIALGCGGLPRGRVIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QKLGG A++D E+ALDPS AE +G++ ++LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAEMQKLGGTAAFVDAEHALDPSYAEKIGVNVDDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DV+V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSGAVDVVVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTGNIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 185 SNTLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKKGEEV 237
>gi|399006173|ref|ZP_10708701.1| protein RecA [Pseudomonas sp. GM17]
gi|425897877|ref|ZP_18874468.1| RecA protein [Pseudomonas chlororaphis subsp. aureofaciens 30-84]
gi|397892204|gb|EJL08682.1| RecA protein [Pseudomonas chlororaphis subsp. aureofaciens 30-84]
gi|398122632|gb|EJM12218.1| protein RecA [Pseudomonas sp. GM17]
Length = 350
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIV+DSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVIDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|374852275|dbj|BAL55212.1| recombination protein RecA [uncultured prokaryote]
Length = 354
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 164/233 (70%), Gaps = 3/233 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M + AL LA+SQ+ FGK +++ + + VI TG++ LDLALG+GG+P+GRI
Sbjct: 1 MDRQKALELAISQIERTFGKGAIMRMGEDASKLQVDVIPTGAIALDLALGVGGIPRGRIT 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTLALHVI +AQK+GG AY+D E+A DP AE +G+D +NLLI+QPD+
Sbjct: 61 EIFGPESSGKTTLALHVIAQAQKMGGIAAYIDAEHAFDPVYAERLGVDLDNLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+V+DSVAAL+P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVVVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+S T +IF+NQ+R K G G E T+GGNALKFYA++RL + + K
Sbjct: 181 SRSKTAVIFINQLRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRKVDAIK 230
>gi|94309411|ref|YP_582621.1| recombinase A [Cupriavidus metallidurans CH34]
gi|430807700|ref|ZP_19434815.1| recombinase A [Cupriavidus sp. HMR-1]
gi|123081425|sp|Q1LR74.1|RECA_RALME RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|93353263|gb|ABF07352.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Cupriavidus metallidurans CH34]
gi|429499984|gb|EKZ98374.1| recombinase A [Cupriavidus sp. HMR-1]
Length = 353
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 123/249 (49%), Positives = 166/249 (66%), Gaps = 3/249 (1%)
Query: 53 FDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLAL 112
DD+ +K AL ALSQ+ FGK S++ L + V+STGSL LD+AL
Sbjct: 1 MDDKKAGAGVSAEKQKALAAALSQIEKQFGKGSIMRLGDGEIEQDIQVVSTGSLGLDIAL 60
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
G+GGLP+GR+VEIYG E+SGKTTL L V+ E QKLGG CA++D E+ALD A +G+D
Sbjct: 61 GVGGLPRGRVVEIYGPESSGKTTLTLQVVAEMQKLGGTCAFIDAEHALDVQYAGKLGVDV 120
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
NLLI+QPD+ E L + D L +SGSID+IV+DSVAAL+PK EI + Q+R+M
Sbjct: 121 GNLLISQPDTGEQALEITDALVRSGSIDLIVIDSVAALVPKAEIEGEMGDSLPGLQARLM 180
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRT 292
+QALRK+ ++ +++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 181 SQALRKLTGTIKRTNCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRI 237
Query: 293 RLFKIADKV 301
K D+V
Sbjct: 238 GSIKKGDEV 246
>gi|384085451|ref|ZP_09996626.1| recA protein [Acidithiobacillus thiooxidans ATCC 19377]
Length = 345
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 162/237 (68%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
Q+ AL ALSQ+ FGK +++ L + V STGSL LDLALG+GGLP+GR+VE
Sbjct: 4 QRSKALSAALSQIDKQFGKGAVMRLGDHNAIKDIAVYSTGSLGLDLALGVGGLPRGRVVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LH I Q+ GG A++D E+ALDP A +G+D ENLL++QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHAIASCQQAGGTAAFIDAEHALDPGYAHKLGVDLENLLVSQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++D+IVVDSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEIADMLVRSGAVDLIVVDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANIS 183
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 184 RTNTLVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKKGDEV 237
>gi|207366352|emb|CAQ58071.1| recombinase A [Agrobacterium tumefaciens]
Length = 322
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 121/233 (51%), Positives = 159/233 (68%), Gaps = 3/233 (1%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EIYG
Sbjct: 2 ALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEIYGP 61
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD+ E L
Sbjct: 62 ESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQALE 121
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S
Sbjct: 122 ITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSKC 181
Query: 249 LIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 182 MVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKEREEV 231
>gi|399058151|ref|ZP_10744422.1| protein RecA [Novosphingobium sp. AP12]
gi|398041199|gb|EJL34273.1| protein RecA [Novosphingobium sp. AP12]
Length = 357
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 125/258 (48%), Positives = 175/258 (67%), Gaps = 12/258 (4%)
Query: 47 AAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVIST 103
AA++ + DA M + AL AL+Q+ FGK S + L GS+ IST
Sbjct: 2 AAQLKLIQEGKEKDA--MDRQKALEAALAQIDKAFGKGSAMKL----GSKETMQVEAIST 55
Query: 104 GSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPS 163
GSL LD+ALG+GGLP+GR++EIYG E+SGKTTLALHVI EAQK GG A++D E+ALDP
Sbjct: 56 GSLGLDIALGVGGLPRGRVIEIYGPESSGKTTLALHVIAEAQKTGGTAAFIDAEHALDPV 115
Query: 164 LAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGM 223
A+ +G++ + L+++QPD+ E L +VDTL +S +IDV+VVDSVAAL+P+ EI +
Sbjct: 116 YAKKLGVNIDELIVSQPDTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDS 175
Query: 224 YSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYA 283
+ Q+R+M+Q+LRK+ S+ +S ++IF+NQ+R K G G E T+GGNALKFYA
Sbjct: 176 HVGLQARLMSQSLRKLTGSISRSRCMVIFINQLRM--KIGVMYGN-PETTTGGNALKFYA 232
Query: 284 ALRLRMMRTRLFKIADKV 301
++RL + RT K D+V
Sbjct: 233 SVRLDIRRTGAIKDKDEV 250
>gi|444921804|ref|ZP_21241634.1| Protein RecA [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507077|gb|ELV07259.1| Protein RecA [Wohlfahrtiimonas chitiniclastica SH04]
Length = 350
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 122/240 (50%), Positives = 164/240 (68%), Gaps = 11/240 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPKGR 121
K AL+ AL Q+ FGK S++ FG + +STGSL LD+ALGIGGLP+GR
Sbjct: 5 KRKALQAALGQIDKQFGKGSVMR----FGDQTENTDIIPVSTGSLGLDIALGIGGLPRGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTL LH I EAQK GG A++D E+ALDP A +G+D ENL I+QPD
Sbjct: 61 IIEIYGPESSGKTTLTLHAIAEAQKAGGMAAFIDAEHALDPVYAAKLGVDVENLYISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++V+DSVAAL PK EI + + Q+R+M+QALRK+
Sbjct: 121 NGEQALEIADTLVRSGALDIVVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ +S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 181 NIKKSNTLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGSIKKGDEV 237
>gi|58039956|ref|YP_191920.1| recombinase A [Gluconobacter oxydans 621H]
gi|61252238|sp|P48289.2|RECA_GLUOX RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|58002370|gb|AAW61264.1| RecA protein [Gluconobacter oxydans 621H]
Length = 345
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 122/241 (50%), Positives = 169/241 (70%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL ALSQ+ FGK S++ + G R VISTGS+ LD+ALGIGG+P+G
Sbjct: 1 MDKTKALEGALSQIERAFGKGSIMRM----GQRPKVETNVISTGSIGLDIALGIGGMPRG 56
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALHV+ EAQK GG A++D E+ALDP A +G++ ++LL++QP
Sbjct: 57 RIVEIYGPESSGKTTLALHVLAEAQKKGGTVAFIDAEHALDPGYARKLGVNIDDLLLSQP 116
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 117 DAGEQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 176
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
++ +S+TL+IFLNQ+R K G G E T+GGNALKFY+++RL + R K D+
Sbjct: 177 GTVSRSNTLVIFLNQIRM--KIGVMFGN-PETTTGGNALKFYSSIRLDIRRIGSIKDKDE 233
Query: 301 V 301
V
Sbjct: 234 V 234
>gi|374332412|ref|YP_005082596.1| recombinase A [Pseudovibrio sp. FO-BEG1]
gi|359345200|gb|AEV38574.1| recombinase A [Pseudovibrio sp. FO-BEG1]
Length = 354
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 166/238 (69%), Gaps = 4/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K+ AL ALSQ+ FGK S++ + + V STGSL LD+ALGIGGLPKGRI+
Sbjct: 14 MDKNKALDAALSQIERAFGKGSIMRMGQGQAVEIQSV-STGSLSLDIALGIGGLPKGRII 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTTLALH + AQ+ GG CA++D E+ALDP A +G++ ++LLI+QPD+
Sbjct: 73 EVYGPESSGKTTLALHTVASAQRDGGICAFVDAEHALDPVYARKLGVNIDDLLISQPDAG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+V+DSVAAL PK E+ + Q+R+M+QALRK+ S+
Sbjct: 133 EQALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTASI 192
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 193 SKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIKDRDEI 247
>gi|339055914|ref|ZP_08648510.1| RecA protein [gamma proteobacterium IMCC2047]
gi|330720883|gb|EGG99071.1| RecA protein [gamma proteobacterium IMCC2047]
Length = 343
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 164/238 (68%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL +ALSQ+ FGK S++ R R P ISTGSL LD+ALGIGGLPKGRI+
Sbjct: 5 KQRALDMALSQIDKQFGKGSVM---RMGDQERPNVPAISTGSLGLDIALGIGGLPKGRII 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L I EAQK GG A++D E+ALDP A+ +G+D +NLL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLQAIAEAQKAGGTAAFIDAEHALDPDYAQKIGVDVDNLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG++D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 122 EQALEIADALVRSGAVDILVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKMTGNV 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 182 KRSNCMVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKEGDEV 236
>gi|357406174|ref|YP_004918098.1| protein RecA (Recombinase A) [Methylomicrobium alcaliphilum 20Z]
gi|351718839|emb|CCE24513.1| Protein RecA (Recombinase A) [Methylomicrobium alcaliphilum 20Z]
Length = 346
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 164/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL Q+ FGK S++ + SR V+STGSL LD+ALG GGLP+GR++EI
Sbjct: 5 KKKALGAALMQIEKQFGKGSVMRMGDVAASRDIQVVSTGSLSLDIALGCGGLPRGRVIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI + QKLGG A++D E+ALDP AE +G++ ++LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLSVIAQMQKLGGTAAFVDAEHALDPGYAEKIGVNVDDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D++VVDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 185 SNTLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKKGDEV 237
>gi|310658983|ref|YP_003936704.1| DNA strand exchange and recombination protein with protease and
nuclease activity [[Clostridium] sticklandii]
gi|308825761|emb|CBH21799.1| DNA strand exchange and recombination protein with protease and
nuclease activity [[Clostridium] sticklandii]
Length = 350
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 118/241 (48%), Positives = 170/241 (70%), Gaps = 4/241 (1%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D+ ++ +K AL A++++ DFGK S+++L ISTGS+ LD+A+GIGGLP
Sbjct: 2 DEKRMEEKRKALDAAIAKIEKDFGKGSIMTLGEN-AKMNIETISTGSIGLDVAIGIGGLP 60
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRIVEIYG E+SGKTT+ALH + EAQKLGG A++D E+ALDP A+A+G+D + L+++
Sbjct: 61 KGRIVEIYGPESSGKTTVALHAVAEAQKLGGIAAFVDAEHALDPVYAKALGVDIDKLIVS 120
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + ++L +SG+ID+IVVDSVAAL+PK EI + + Q+R+M+QALRK
Sbjct: 121 QPDTGEQALEITESLVRSGAIDIIVVDSVAALVPKAEIEGEMGDSHIGLQARLMSQALRK 180
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S T+ IF+NQ+R K G G E T+GG ALKFYA++RL + + + K
Sbjct: 181 LAGSINKSKTITIFINQLR--EKVGVMFGN-PETTTGGRALKFYASVRLDVRKIDIIKQG 237
Query: 299 D 299
D
Sbjct: 238 D 238
>gi|255021553|ref|ZP_05293596.1| RecA protein [Acidithiobacillus caldus ATCC 51756]
gi|340782427|ref|YP_004749034.1| RecA protein [Acidithiobacillus caldus SM-1]
gi|254968941|gb|EET26460.1| RecA protein [Acidithiobacillus caldus ATCC 51756]
gi|340556579|gb|AEK58333.1| RecA protein [Acidithiobacillus caldus SM-1]
Length = 347
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 162/237 (68%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+ AL ALSQ+ FGK +++ L + V STGSL LDLALG+GGLP+GR+VE
Sbjct: 4 HRSKALAAALSQIDKQFGKGAIMRLGEQSAVKDIQVYSTGSLGLDLALGVGGLPRGRVVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LH I Q GG A++D E+ALDPS A+ +G+D ENLLI+QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHAIASCQASGGTAAFIDAEHALDPSYAQKLGVDLENLLISQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++D+IVVDSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEIADMLVRSGAVDLIVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIS 183
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 RTNTLVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGTIKKGDEI 237
>gi|167645357|ref|YP_001683020.1| recombinase A [Caulobacter sp. K31]
gi|189039593|sp|B0SZN2.1|RECA_CAUSK RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|167347787|gb|ABZ70522.1| recA protein [Caulobacter sp. K31]
Length = 356
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 120/243 (49%), Positives = 167/243 (68%), Gaps = 18/243 (7%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPKGR 121
K AL AL+Q+ FGK S++ L +G V ISTGSL LD+ALGIGGLPKGR
Sbjct: 17 KQRALEAALAQIDRAFGKGSVMKL-----GEKGKVEMESISTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
++EIYG E+SGKTTLALHV+ E QK GG A++D E+ALDP A +G++ +NLL++QPD
Sbjct: 72 VIEIYGPESSGKTTLALHVVAECQKAGGTAAFVDAEHALDPGYAFKLGVNLDNLLVSQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++V+DSVAAL PK EI + Q+R+M+QALRK+
Sbjct: 132 NGEQALEITDTLVRSGAVDIVVIDSVAALTPKAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRM---DEVTSGGNALKFYAALRLRMMRTRLFKIA 298
S+ +++T++IF+NQ+R +G M E T+GGNALKFYA++RL + RT K
Sbjct: 192 SINKANTIVIFINQIRHK------IGVMYGSPETTTGGNALKFYASVRLDIRRTGSIKNR 245
Query: 299 DKV 301
D++
Sbjct: 246 DEI 248
>gi|284047740|ref|YP_003398079.1| recA protein [Acidaminococcus fermentans DSM 20731]
gi|283951961|gb|ADB46764.1| recA protein [Acidaminococcus fermentans DSM 20731]
Length = 362
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 115/237 (48%), Positives = 161/237 (67%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K+ AL AL Q+ DFGK S++ L I TG+L LD+ALG+GG+P+GRI+E
Sbjct: 6 EKNKALDAALKQIEKDFGKGSIMKLGAASAKMNIETIPTGALSLDIALGVGGIPRGRIIE 65
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTT+ALH+I EAQK GGY A++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 66 IYGPESSGKTTVALHMIAEAQKRGGYAAFIDAEHALDPEYARHLGVDIDNLLISQPDTGE 125
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG+ID+IV+DSVAAL+PK EI + + Q+R+M+QALRK+ +
Sbjct: 126 QALEICDALVRSGAIDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTGVIA 185
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S T +F+NQ+R K G G EVT+GG ALKFY+ +R+ + R K + +
Sbjct: 186 KSRTATVFINQIR--EKVGVMFGN-PEVTTGGRALKFYSTIRMDVRRVESLKSGNDI 239
>gi|330504207|ref|YP_004381076.1| recombinase A [Pseudomonas mendocina NK-01]
gi|328918493|gb|AEB59324.1| recombinase A [Pseudomonas mendocina NK-01]
Length = 347
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQKLG CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKLGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFY+++RL + RT K ++V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRTGAVKEGEEV 236
>gi|395790914|ref|ZP_10470373.1| protein recA [Bartonella alsatica IBS 382]
gi|395409210|gb|EJF75809.1| protein recA [Bartonella alsatica IBS 382]
Length = 347
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 161/238 (67%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL Q+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKTKALDAALLQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKDRDMI 235
>gi|121536015|ref|ZP_01667805.1| recA protein [Thermosinus carboxydivorans Nor1]
gi|121305405|gb|EAX46357.1| recA protein [Thermosinus carboxydivorans Nor1]
Length = 345
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 121/252 (48%), Positives = 166/252 (65%), Gaps = 10/252 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL A+ Q+ +FGK S++ L VI TG L LD+ALG+GG+P+GR+V
Sbjct: 1 MDKLKALENAMRQIEKEFGKGSIMRLGEAAAKMNVEVIPTGCLALDIALGVGGIPRGRVV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH+I +AQK+GG A++D E+ALDP A+ +G+D ENLLI+QPD+
Sbjct: 61 EIYGHESSGKTTVALHMIAQAQKMGGIAAFIDAEHALDPIYAKKLGVDTENLLISQPDNG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG+ID+IVVDSVAAL+PK EI + + Q+R+M+QALRK+ +
Sbjct: 121 EQALEIADALVRSGAIDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGII 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNI 303
+S T IF+NQ+R K G G E T+GG ALKFYA++RL + + K +V
Sbjct: 181 SKSRTTAIFINQIR--EKVGVMFGN-PETTTGGRALKFYASVRLEVRKAEAIKQGSEV-- 235
Query: 304 LEVVNIGSMIRL 315
IGS R+
Sbjct: 236 -----IGSRTRI 242
>gi|388543742|ref|ZP_10147032.1| recombinase A [Pseudomonas sp. M47T1]
gi|388278299|gb|EIK97871.1| recombinase A [Pseudomonas sp. M47T1]
Length = 354
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDQ--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|347527908|ref|YP_004834655.1| recombinase A [Sphingobium sp. SYK-6]
gi|345136589|dbj|BAK66198.1| protein RecA [Sphingobium sp. SYK-6]
Length = 364
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/245 (49%), Positives = 168/245 (68%), Gaps = 10/245 (4%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGL 117
A M++ AL AL+Q+ FGK S + L GS+ ISTGSL LD+ALGIGGL
Sbjct: 19 AGTMERQKALEAALAQIDRAFGKGSAMRL----GSKETMQIEAISTGSLGLDIALGIGGL 74
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
P+GRI+EIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G++ + L++
Sbjct: 75 PRGRIIEIYGPESSGKTTLALHAIAEAQKAGGTAAFIDAEHALDPVYAKKLGVNIDELIV 134
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +S +IDV+V+DSVAAL+P+ EI + + Q+R+M+QALR
Sbjct: 135 SQPDTGEQALEIADTLVRSNAIDVLVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALR 194
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKI 297
K+ S+ +S ++IF+NQVR K G G E T+GGNALKFYA++RL + RT K
Sbjct: 195 KLTGSISRSRCMVIFINQVRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRTGQIKD 251
Query: 298 ADKVN 302
D++
Sbjct: 252 RDEIT 256
>gi|415975305|ref|ZP_11558834.1| recombinase A [Acidithiobacillus sp. GGI-221]
gi|339833935|gb|EGQ61735.1| recombinase A [Acidithiobacillus sp. GGI-221]
Length = 357
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 162/237 (68%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
Q+ AL ALSQ+ FGK +++ L + V STGSL LDLALG+GGLP+GR+VE
Sbjct: 16 QRSKALSAALSQIDKQFGKGAVMRLGDHNAIKDIEVYSTGSLGLDLALGVGGLPRGRVVE 75
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LH I Q GG A++D E+ALDP A +G+D ENLLI+QPD+ E
Sbjct: 76 IYGPESSGKTTLTLHAIASCQAAGGTAAFIDAEHALDPGYAHKLGVDLENLLISQPDTGE 135
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++D+IV+DSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 136 QALEIADMLVRSGAVDLIVIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANIS 195
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K +D+V
Sbjct: 196 RTNTLVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKKSDEV 249
>gi|251773419|gb|EES53968.1| recA protein [Leptospirillum ferrodiazotrophum]
Length = 357
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/236 (51%), Positives = 160/236 (67%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K +L LALSQ+ FGK S++ + + PVIS+GSL LD+ALGIGG PKGRI+EI
Sbjct: 8 KQRSLDLALSQIEKQFGKGSIMRMGKDAPIIETPVISSGSLALDIALGIGGYPKGRIIEI 67
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I E K G A++D E+ALD A +G+ E+LLIAQPDS E
Sbjct: 68 YGPESSGKTTLALHAIAEVHKKNGMAAFIDAEHALDLGYARKLGVKTEDLLIAQPDSGEQ 127
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + +TL +SGS+D+IVVDSVAAL+PK E+ + + Q+R+M+QALRK+ S+ +
Sbjct: 128 ALEIAETLVRSGSLDLIVVDSVAALVPKAELEGDMGDSHMGLQARLMSQALRKLTSSISK 187
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S T++IF+NQ+R K G G E T+GGNALKFYA+ RL + R K D V
Sbjct: 188 SSTVVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASQRLDIRRIESIKEGDHV 240
>gi|144123|gb|AAA22999.1| RecA protein [Brucella abortus]
Length = 360
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 126/241 (52%), Positives = 165/241 (68%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+ ENLLI+QP +
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVHLENLLISQPITG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDA---QSRIMTQALRKIH 240
E L + DTL +SG+IDV+VVDSVAAL P+ E I G D+ Q+R+M+QA+RK+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAE----IEGEMGDSHGLQARLMSQAVRKLT 189
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+
Sbjct: 190 GSISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDE 246
Query: 301 V 301
V
Sbjct: 247 V 247
>gi|198283178|ref|YP_002219499.1| recA protein [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665991|ref|YP_002425407.1| recA protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|226723623|sp|B5EQ47.1|RECA_ACIF5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226737749|sp|B7J7A9.1|RECA_ACIF2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|198247699|gb|ACH83292.1| recA protein [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518204|gb|ACK78790.1| recA protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 345
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 162/237 (68%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
Q+ AL ALSQ+ FGK +++ L + V STGSL LDLALG+GGLP+GR+VE
Sbjct: 4 QRSKALSAALSQIDKQFGKGAVMRLGDHNAIKDIEVYSTGSLGLDLALGVGGLPRGRVVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LH I Q GG A++D E+ALDP A +G+D ENLLI+QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHAIASCQAAGGTAAFIDAEHALDPGYAHKLGVDLENLLISQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++D+IV+DSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEIADMLVRSGAVDLIVIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANIS 183
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K +D+V
Sbjct: 184 RTNTLVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKKSDEV 237
>gi|464597|sp|Q05358.1|RECA_LEGPN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|48780|emb|CAA39097.1| recA [Legionella pneumophila]
gi|227652|prf||1708209A recA gene
Length = 348
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 163/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL A+SQ+ FGK S++ + SR ISTGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KQKALSAAVSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QK+GG A++D E+ALDPS A+ +G+ + LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +S ++DV+++DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K +++
Sbjct: 185 SNTLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKKGEEI 237
>gi|119383349|ref|YP_914405.1| recombinase A [Paracoccus denitrificans PD1222]
gi|119373116|gb|ABL68709.1| recA protein [Paracoccus denitrificans PD1222]
Length = 356
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 120/244 (49%), Positives = 166/244 (68%), Gaps = 3/244 (1%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
+D + K AL AL+Q+ FGK S++ L STGSL LD+ALGIGGLP
Sbjct: 10 NDKRSADKQKALDSALAQIERQFGKGSIMKLGADNPVAEIEATSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRI+EI+G E+SGKTTL LHV+ E QK GG CA++D E+ALDP A+ +G++ + LLI+
Sbjct: 70 KGRIIEIFGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VDTL +SG++ ++VVDSVAAL PK EI + M +Q+R+M+QA+RK
Sbjct: 130 QPDTGEQALEIVDTLVRSGAVSLVVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 190 LTASIGRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRAGSIKDR 246
Query: 299 DKVN 302
D+V
Sbjct: 247 DEVT 250
>gi|217969145|ref|YP_002354379.1| recombinase A [Thauera sp. MZ1T]
gi|217506472|gb|ACK53483.1| recA protein [Thauera sp. MZ1T]
Length = 345
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 162/236 (68%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ + R +STGSL LD+ALG+GGLP+GR+VEI
Sbjct: 5 KAKALSAALSQIEKQFGKGSIMRMGDGSIERDIQTVSTGSLGLDIALGLGGLPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QKLGG A++D E+ALD AE +G+D E+LLI+QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDVGYAEKLGVDIEDLLISQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG +D++V+DSVAAL PK EI + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIADMLVRSGGVDIVVIDSVAALTPKAEIEGEMGDQLPGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++TL+IF+NQ+R K G G E T+GGNALKFYA++R+ + RT K D+V
Sbjct: 185 TNTLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRMDIRRTGTIKKGDEV 237
>gi|154253020|ref|YP_001413844.1| recA protein [Parvibaculum lavamentivorans DS-1]
gi|189039601|sp|A7HWA4.1|RECA_PARL1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|154156970|gb|ABS64187.1| recA protein [Parvibaculum lavamentivorans DS-1]
Length = 365
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 163/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L + +STGSL LD+ALGIGGLP+GRI+EI
Sbjct: 15 KKKALDAALSQIERSFGKGSIMRLGKNEQIVEIESVSTGSLGLDIALGIGGLPRGRIIEI 74
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL + EAQK GG CA++D E+ALDP A +G+ ++LLI+QPD+ E
Sbjct: 75 YGPESSGKTTLALQTVAEAQKSGGVCAFVDAEHALDPIYARKLGVQLDDLLISQPDTGEQ 134
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+V+DSVAAL PK E+ + Q+R+M+QALRK+ S+ +
Sbjct: 135 ALEIADTLVRSGAVDVLVIDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTGSISK 194
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 195 SNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIKDRDEV 247
>gi|254470359|ref|ZP_05083763.1| protein RecA [Pseudovibrio sp. JE062]
gi|211960670|gb|EEA95866.1| protein RecA [Pseudovibrio sp. JE062]
Length = 354
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 165/238 (69%), Gaps = 4/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K+ AL ALSQ+ FGK S++ + + V STGSL LD+ LGIGGLPKGRI+
Sbjct: 14 MDKNKALDAALSQIERAFGKGSIMRMGQGQAVEIQSV-STGSLSLDIGLGIGGLPKGRII 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + AQ+ GG CA++D E+ALDP A +G++ ++LLI+QPD+
Sbjct: 73 EIYGPESSGKTTLALHTVASAQREGGICAFVDAEHALDPVYARKLGVNIDDLLISQPDAG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+V+DSVAAL PK E+ + Q+R+M+QALRK+ S+
Sbjct: 133 EQALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTASI 192
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 193 SKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIKDRDEI 247
>gi|333985518|ref|YP_004514728.1| recombinase A [Methylomonas methanica MC09]
gi|333809559|gb|AEG02229.1| Protein recA [Methylomonas methanica MC09]
Length = 351
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 117/236 (49%), Positives = 164/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL Q+ FGK S++ + SR V+STGSL LD+ALG+GGLP+GR++EI
Sbjct: 5 KKKALGAALMQIEKQFGKGSVMRMGDVAASRDIEVVSTGSLSLDIALGVGGLPRGRVIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L I + QKLGG A++D E+ALDP AE +G++ ++LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQTIAQMQKLGGTAAFVDAEHALDPVYAEKIGVNIDDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D++VVDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 185 SNTLVIFINQLRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKKGDEV 237
>gi|359407389|ref|ZP_09199866.1| protein RecA [SAR116 cluster alpha proteobacterium HIMB100]
gi|356677428|gb|EHI49772.1| protein RecA [SAR116 cluster alpha proteobacterium HIMB100]
Length = 357
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 120/240 (50%), Positives = 164/240 (68%), Gaps = 11/240 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPKGR 121
K AL A+ Q+ FGK S++ L G R V +STGSL LD+ALGIGG PKGR
Sbjct: 15 KSKALEAAIGQIEKAFGKGSVMKL----GQRDSVVDIQAVSTGSLGLDIALGIGGFPKGR 70
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLALH + EAQ GG CA++D E+ALDP+ A +G++ ++LLI+QPD
Sbjct: 71 IIEIYGPESSGKTTLALHAVAEAQAAGGNCAFVDAEHALDPTYARKLGVNLDDLLISQPD 130
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+V+DSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 131 AGEQALEIADTLVRSGAIDVLVIDSVAALVPRAELEGEMGDTHVGLHARLMSQALRKLTS 190
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+ L+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 191 SIARSNCLVIFINQIRL--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKDKDDV 247
>gi|421617858|ref|ZP_16058840.1| recombinase A [Pseudomonas stutzeri KOS6]
gi|409780103|gb|EKN59746.1| recombinase A [Pseudomonas stutzeri KOS6]
Length = 347
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDTHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|409426349|ref|ZP_11260904.1| recombinase A [Pseudomonas sp. HYS]
Length = 355
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|104783104|ref|YP_609602.1| recombinase A [Pseudomonas entomophila L48]
gi|122402255|sp|Q1I6B7.1|RECA_PSEE4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|95112091|emb|CAK16818.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Pseudomonas entomophila L48]
Length = 355
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|347446578|dbj|BAK82130.1| recombination protein RecA [Calyptogena phaseoliformis symbiont]
Length = 344
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 115/237 (48%), Positives = 164/237 (69%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
QK AL+ L+Q+ FGK S++ L + TGSL LD+ALGIGGLP+GR++E
Sbjct: 4 QKKQALKATLAQIDKQFGKGSVMFLGDDQAQSDIEAVFTGSLSLDIALGIGGLPRGRVIE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LHVI E QKLGG A++D E+ALDP A+ +G++ ++LLI+QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHVIAEVQKLGGTAAFIDAEHALDPRYAKRLGVNTDDLLISQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SGS+D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEITDMLVRSGSVDIVVIDSVAALTPKAEIEGEMGASHMGLQARLMSQALRKLTSNIK 183
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+++T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 RTNTMVIFINQLRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGTIKKGDEI 237
>gi|372267657|ref|ZP_09503705.1| recombinase A [Alteromonas sp. S89]
Length = 343
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 165/236 (69%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
KD AL+ ALSQ+ FGK +++ + R P ISTGSL LD+ALGIGGLP+GRIVEI
Sbjct: 5 KDKALQAALSQIERQFGKGTVMRMGDKE-RERIPAISTGSLGLDVALGIGGLPRGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI EAQ+ GG CA++D E+ALDP AE +G++ + L+++QPD+ E
Sbjct: 64 YGPESSGKTTLTLQVIAEAQRKGGTCAFVDAEHALDPIYAEKLGVNVDELIVSQPDTGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L V D L +SG++DV++VDSVAAL P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 124 ALEVADMLVRSGAVDVLIVDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKLTGNIKN 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++TL +F+NQ+R K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 184 TNTLCVFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGSVKEGDEV 236
>gi|325277019|ref|ZP_08142684.1| recombinase A [Pseudomonas sp. TJI-51]
gi|324097855|gb|EGB96036.1| recombinase A [Pseudomonas sp. TJI-51]
Length = 355
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|585798|sp|Q07447.1|RECA_PSEPU RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|294375|gb|AAC36872.1| recA protein [Pseudomonas putida]
gi|1617593|gb|AAB16921.1| RecA [Pseudomonas putida]
gi|740001|prf||2004287A recA gene
Length = 355
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|357384882|ref|YP_004899606.1| recombinase A [Pelagibacterium halotolerans B2]
gi|351593519|gb|AEQ51856.1| RecA protein [Pelagibacterium halotolerans B2]
Length = 357
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 119/242 (49%), Positives = 167/242 (69%), Gaps = 4/242 (1%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
D M K+ AL AL Q+ +FGK S++ L ISTGSL LD+ALGIGGLP+
Sbjct: 10 DGGSMDKNKALEAALGQIERNFGKGSIMKLGENT-QVNVESISTGSLGLDIALGIGGLPR 68
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+E++G E+SGKTTLALHV+ EAQK GG CA++D E+ALDP+ A +G++ ++LLI+Q
Sbjct: 69 GRIIEVFGPESSGKTTLALHVLAEAQKSGGICAFIDAEHALDPTYARKLGVNIDDLLISQ 128
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG+IDV+VVDSVAAL P+ E+ + Q+R+M+QA+RK+
Sbjct: 129 PDAGEQALEIADTLVRSGAIDVLVVDSVAALTPRAELEGEMGDSLPGLQARLMSQAMRKL 188
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
S+ +S ++IF+NQ+R K G G E T+GGNALKFY+++RL + R K +
Sbjct: 189 TASISKSKAMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGAIKDRE 245
Query: 300 KV 301
+V
Sbjct: 246 EV 247
>gi|221632222|ref|YP_002521443.1| recA protein [Thermomicrobium roseum DSM 5159]
gi|221156923|gb|ACM06050.1| recA protein [Thermomicrobium roseum DSM 5159]
Length = 354
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 113/233 (48%), Positives = 164/233 (70%), Gaps = 3/233 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M + AL LA+SQ+ FGK +++ + + VI TG++ LDLALG+GG+P+GRI
Sbjct: 1 MDRQKALELAISQIERSFGKGAIMRMGEDPSKLQVDVIPTGAIALDLALGVGGIPRGRIT 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTLALHVI +AQ++GG AY+D E+A DP AE +G+D +NLLI+QPD+
Sbjct: 61 EIFGPESSGKTTLALHVIAQAQRMGGIAAYIDAEHAFDPVYAERLGVDLDNLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+V+DSVAAL+P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVVVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+S T +IF+NQ+R K G G E T+GGNALKFYA++RL + + K
Sbjct: 181 SRSKTAVIFINQLRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRKVDAIK 230
>gi|393718758|ref|ZP_10338685.1| recombinase A [Sphingomonas echinoides ATCC 14820]
Length = 367
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 121/245 (49%), Positives = 171/245 (69%), Gaps = 10/245 (4%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGG 116
D ++ AL AL+Q+ FGK S + L GS++ VISTGSL LD+ALG+GG
Sbjct: 20 DKATAERAKALEAALAQIDRAFGKGSAMKL----GSKQTMQVEVISTGSLGLDIALGVGG 75
Query: 117 LPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLL 176
LP+GR++EIYG E+SGKTTLALHVI EAQK GG A++D E+ALDP A+ +G++ + L+
Sbjct: 76 LPRGRVIEIYGPESSGKTTLALHVIAEAQKGGGTAAFVDAEHALDPVYAKKLGVNIDELI 135
Query: 177 IAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQAL 236
++QPD+ E L +VDTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+Q+L
Sbjct: 136 VSQPDTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSL 195
Query: 237 RKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
RK+ S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K
Sbjct: 196 RKLTGSISRSRCMVIFINQLRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRTGQIK 252
Query: 297 IADKV 301
D++
Sbjct: 253 DRDEI 257
>gi|431801194|ref|YP_007228097.1| recombinase A [Pseudomonas putida HB3267]
gi|430791959|gb|AGA72154.1| recombinase A [Pseudomonas putida HB3267]
Length = 355
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|90416732|ref|ZP_01224662.1| recombinase A [gamma proteobacterium HTCC2207]
gi|90331485|gb|EAS46721.1| recombinase A [marine gamma proteobacterium HTCC2207]
Length = 340
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 120/237 (50%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + G+R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KSKALEAALGQIERQFGKGTVMRMGE--GTRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK GG CA++D E+ALDP AE +G+ ++L+++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLQVIAEAQKAGGTCAFIDAEHALDPVYAEKLGVSVDDLIVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L V D L +SG+ DV+VVDSVAAL P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 123 QALEVTDMLVRSGACDVLVVDSVAALTPRAEIEGDMGDHHVGLQARLMSQALRKLTGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFY+++RL + R K D++
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRIGAVKDGDEI 236
>gi|418295685|ref|ZP_12907535.1| recombinase A [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|50250475|emb|CAH03857.1| RecA protein [Pseudomonas stutzeri]
gi|379067018|gb|EHY79761.1| recombinase A [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 347
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDTHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|406916498|gb|EKD55510.1| hypothetical protein ACD_60C00004G0020 [uncultured bacterium]
Length = 347
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 164/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +R VISTGSL LD+ALG+GGLP+GR+VEI
Sbjct: 5 KKKALGAALSQIERQFGKGSVMRLGDASSTRDIEVISTGSLALDIALGVGGLPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI Q+ GG A++D E+ALDP+ A+ +G++ + LLI+QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAACQRQGGTAAFVDAEHALDPAYAKRLGVNVDELLISQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +S ++D++VVDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSSAVDIVVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 185 SNTLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGSVKNGDEV 237
>gi|331007036|ref|ZP_08330270.1| RecA protein [gamma proteobacterium IMCC1989]
gi|330419163|gb|EGG93595.1| RecA protein [gamma proteobacterium IMCC1989]
Length = 377
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 121/229 (52%), Positives = 161/229 (70%), Gaps = 10/229 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGRI 122
KD AL ALSQ+ FGK +++ + G + + P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 34 KDKALEAALSQIERQFGKGTVMRM----GDKELVKIPAISTGSLGLDIALGIGGLPKGRI 89
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
EIYG E+SGKTTL L VI EAQK GG CA++D E+ALDP AE +G++ ++L+I+QPD+
Sbjct: 90 AEIYGPESSGKTTLTLQVIAEAQKQGGTCAFIDAEHALDPVYAEKLGVNVDDLIISQPDT 149
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L V D L +SG++DVIV+DSVAAL PK EI + + Q+R+M+QALRKI +
Sbjct: 150 GEQALEVADMLVRSGAVDVIVIDSVAALTPKAEIEGDMGDHHVGLQARLMSQALRKITGN 209
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
+ ++ L IF+NQ+R K G G E T+GGNALKFY+++RL + R
Sbjct: 210 IKNANCLCIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRR 255
>gi|347446589|dbj|BAK82138.1| recombination protein RecA [Calyptogena pacifica symbiont]
Length = 344
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 115/237 (48%), Positives = 164/237 (69%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
QK+ AL+ AL+Q+ FGK S++ L +STGSL LD+ALGIGGLP+GR++E
Sbjct: 4 QKEQALKAALAQIDKQFGKGSVMFLGDDQAQSNIEAVSTGSLSLDIALGIGGLPRGRVIE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LHVI E QKLGG A++D E+ALDP A+ + ++ ++LLI+QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHVIAEVQKLGGTAAFIDAEHALDPRYAKRLDVNTDDLLISQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG +D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEITDMLVRSGGVDIVVIDSVAALAPKAEIEGEMGASHMGLQARLMSQALRKLTSNIK 183
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+++T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+
Sbjct: 184 RTNTMVIFINQLRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKKGDET 237
>gi|61097703|emb|CAI38696.1| recombinase A [Chromobacterium violaceum]
gi|61097713|emb|CAI38701.1| recombinase A [Chromobacterium violaceum]
Length = 285
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 117/226 (51%), Positives = 160/226 (70%), Gaps = 3/226 (1%)
Query: 76 QLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTT 135
Q+ FGK S++ + + VISTGSL LDLALG+GGLP+GR+VEIYG E+SGKTT
Sbjct: 1 QIEKQFGKGSIMRMSDNQITENLQVISTGSLTLDLALGVGGLPRGRVVEIYGPESSGKTT 60
Query: 136 LALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTK 195
L L + EAQKLGG CAY+D ENALDP A+ +G++ E+LLI+QPD+ E L + D L +
Sbjct: 61 LCLQAVAEAQKLGGTCAYIDAENALDPVYAQKLGVNVEDLLISQPDTGEQALEICDMLVR 120
Query: 196 SGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQ 255
S +DVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ +++TL+IF+NQ
Sbjct: 121 SSGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRTNTLVIFINQ 180
Query: 256 VRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+R K G G E T+GGNALKFYA++RL + RT K +++
Sbjct: 181 IRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGGIKKGEEL 223
>gi|339486208|ref|YP_004700736.1| recombinase A [Pseudomonas putida S16]
gi|338837051|gb|AEJ11856.1| recombinase A [Pseudomonas putida S16]
Length = 355
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|395652525|ref|ZP_10440375.1| recombinase A [Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 348
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 122/252 (48%), Positives = 172/252 (68%), Gaps = 15/252 (5%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
K AL ALSQ+ FGK +++ R R P+ +STGSL LD+ALGIGG+P+GRI+
Sbjct: 5 KKKALDAALSQIEKQFGKGAVM---RMGEEPREPIPAVSTGSLGLDIALGIGGVPEGRII 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGK+TL L ++ +AQKLG CA++D E+ALDP AE +G+D ++LL++QPD+
Sbjct: 62 EIYGPESSGKSTLCLQIVAQAQKLGKACAFIDAEHALDPLYAEKLGVDLDSLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SGSI VI++DSVAAL+PK EI + + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEITDMLVRSGSIGVIIIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTASV 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNI 303
Q++T+++F+NQ+R K G G E T+GGNALKFY+++RL + RT K D V
Sbjct: 182 KQTNTILVFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRTGAVKDGDTV-- 236
Query: 304 LEVVNIGSMIRL 315
IGS R+
Sbjct: 237 -----IGSETRV 243
>gi|339493489|ref|YP_004713782.1| recombinase A [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338800861|gb|AEJ04693.1| recombinase A [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 348
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDTHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|289208783|ref|YP_003460849.1| recA protein [Thioalkalivibrio sp. K90mix]
gi|288944414|gb|ADC72113.1| recA protein [Thioalkalivibrio sp. K90mix]
Length = 348
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 116/239 (48%), Positives = 168/239 (70%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
+ AL AL Q+ FGK +++ + G ++ P ISTGSL LD+ALGIGG+P+GR+
Sbjct: 5 RKKALTAALGQIERQFGKGAVMRM----GDQQAVDVPAISTGSLALDIALGIGGVPRGRV 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L V+ EAQKLGG A++D E+ALDP+ AE +G++ ++LL++QPD+
Sbjct: 61 VEIYGPESSGKTTLTLQVVAEAQKLGGTAAFVDAEHALDPTYAEKLGVNVDDLLVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DV++VDSVAAL PK EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEIADMLVRSGAVDVVIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTAN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S+TL+IF+NQ+R K G G E T+GGNALKFY+++R+ + R K D+V
Sbjct: 181 IKRSNTLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRMDIRRIGAIKKGDEV 236
>gi|393725026|ref|ZP_10344953.1| recombinase A [Sphingomonas sp. PAMC 26605]
Length = 358
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 120/240 (50%), Positives = 170/240 (70%), Gaps = 10/240 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
++ AL AL+Q+ FGK S + L GS++ VISTGSL LD+ALG+GGLP+GR
Sbjct: 15 ERAKALEAALAQIDRAFGKGSAMKL----GSKQTMQVEVISTGSLGLDIALGVGGLPRGR 70
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
++EIYG E+SGKTTLALHVI EAQK GG A++D E+ALDP A+ +G++ + L+++QPD
Sbjct: 71 VIEIYGPESSGKTTLALHVIAEAQKTGGTAAFVDAEHALDPVYAKKLGVNIDELIVSQPD 130
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L +VDTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+Q+LRK+
Sbjct: 131 TGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTG 190
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D++
Sbjct: 191 SISRSRCMVIFINQLRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRTGQIKDRDEI 247
>gi|350560891|ref|ZP_08929730.1| recA protein [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349780998|gb|EGZ35306.1| recA protein [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 375
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 166/243 (68%), Gaps = 3/243 (1%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
+DA + AL AL Q+ FGK +++ + R VISTGSL LD+ALGIGGLP
Sbjct: 30 EDAVDENRKKALAAALGQIERQFGKGAVMRMGDGTAVRDIEVISTGSLALDVALGIGGLP 89
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GR+VE+YG E+SGKTTL L V+ E QKLGG A++D E+ALDP A+ +G++ + LLIA
Sbjct: 90 RGRVVEVYGPESSGKTTLTLQVVAECQKLGGTAAFIDAEHALDPGYAQKLGVNVDELLIA 149
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + D L +SG++D++VVDSVAAL PK EI + + Q+R+M+QALRK
Sbjct: 150 QPDTGEQALEIADMLVRSGAVDLVVVDSVAALTPKAEIEGEMGDAHVGLQARLMSQALRK 209
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ ++ +S+TL++F+NQ+R K G G E T+GGNALKFY+++R+ + R K
Sbjct: 210 LTANIKRSNTLVVFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRMDIRRIGAIKRG 266
Query: 299 DKV 301
D+V
Sbjct: 267 DEV 269
>gi|300023634|ref|YP_003756245.1| recA protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299525455|gb|ADJ23924.1| recA protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 377
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/230 (51%), Positives = 162/230 (70%), Gaps = 8/230 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGR 121
M K AL AL Q+ +FGK S++ R + + + I TGSL LD+ALGIGGLPKGR
Sbjct: 14 MDKKQALEHALQQIDKNFGKGSIM---RLGANDKVDIEAIPTGSLGLDIALGIGGLPKGR 70
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLALHV+ EAQK GG CA++D E+A+DP A+ +G+ E+LLI+QPD
Sbjct: 71 IIEIYGPESSGKTTLALHVVAEAQKRGGICAFIDAEHAIDPGYAKKLGVKIEDLLISQPD 130
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL PK E+ + Q+R+M+QALRK+
Sbjct: 131 TGEQALEIADTLVRSGAVDVLVVDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTG 190
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
S+ +S +++F+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 191 SISKSKCMVVFINQIRM--KIGIMFGN-PETTTGGNALKFYASVRLDIRR 237
>gi|449446596|ref|XP_004141057.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Cucumis sativus]
Length = 422
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/232 (56%), Positives = 174/232 (75%), Gaps = 1/232 (0%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ K+ +K+ AL+ AL Q+ FGK S++ L R S+ PV+S+GS+ LD+ALG+GG PK
Sbjct: 54 EEKLSKKELALQQALDQITTAFGKGSIMWLGRSQSSKSVPVVSSGSVSLDIALGVGGFPK 113
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GR++EIYG EASGKTTLALHVI E QK GG C ++D E+ALDP+LA+ +G+D ENLL++Q
Sbjct: 114 GRVIEIYGPEASGKTTLALHVIAETQKQGGCCVFIDAEHALDPALAQTIGVDTENLLLSQ 173
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD E LS+VDTL +SGS+D +VVDSVAAL+PK E+ + + Q+R+M+QALRK+
Sbjct: 174 PDCGEQALSLVDTLIRSGSVDCVVVDSVAALVPKAELDGEMGDAHMAMQARLMSQALRKL 233
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
+SL QS T++IF+NQVR S S G G EVT GGNALKFYA++RL + R
Sbjct: 234 CHSLSQSQTILIFINQVR-SKMSTYGYGGPSEVTCGGNALKFYASVRLNIRR 284
>gi|431927972|ref|YP_007241006.1| protein RecA [Pseudomonas stutzeri RCH2]
gi|431826259|gb|AGA87376.1| protein RecA [Pseudomonas stutzeri RCH2]
Length = 347
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDTHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|387127527|ref|YP_006296132.1| recombinase A [Methylophaga sp. JAM1]
gi|386274589|gb|AFI84487.1| RecA protein [Methylophaga sp. JAM1]
Length = 346
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 163/237 (68%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ L R +STGS+ LD+ALGIGGLP+GR+VE
Sbjct: 4 NKKKALGAALGQIEKQFGKGAVMRLGDGTAHRDIDAVSTGSIGLDVALGIGGLPRGRVVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LH I E QKLGG A++D E+ALDP AE +G++ ++LL++QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHAIAEMQKLGGTAAFVDAEHALDPLYAEKLGVNIDDLLVSQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++D++VVDSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIK 183
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 RSNTLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKKGDEI 237
>gi|70728613|ref|YP_258362.1| recombinase A [Pseudomonas protegens Pf-5]
gi|76363337|sp|Q4KHC1.1|RECA_PSEF5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|68342912|gb|AAY90518.1| RecA protein [Pseudomonas protegens Pf-5]
Length = 350
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|224369826|ref|YP_002603990.1| recombinase A [Desulfobacterium autotrophicum HRM2]
gi|259563332|sp|C0QI90.1|RECA_DESAH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|223692543|gb|ACN15826.1| RecA [Desulfobacterium autotrophicum HRM2]
Length = 347
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/247 (46%), Positives = 172/247 (69%), Gaps = 12/247 (4%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRR---GPVISTGSLKLDLALGIGGL 117
A++ +KD A++ A+ Q+ FGK S++ L G+R P+ISTGSL LD ALG+GG
Sbjct: 2 AELTEKDKAIQTAMGQIERQFGKGSIMKL----GAREIQAVPIISTGSLALDKALGVGGF 57
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
P+GR++EIYG E+SGKTTLALH + EAQ+ GG A++D E+ALD + A +G++ + LL+
Sbjct: 58 PRGRVIEIYGPESSGKTTLALHAVAEAQRQGGIAAFIDAEHALDVAYARRLGVNCDELLV 117
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L +VD L +SG++D+I+VDSVAAL+P+ EI + + Q+R+M+QALR
Sbjct: 118 SQPDTGEQALEIVDMLVRSGAVDIIIVDSVAALVPRAEIEGDMGDSHMGLQARLMSQALR 177
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKI 297
K+ ++ ++HT +IF+NQ+R K G G E T+GGNALKFYA++R+ + + K
Sbjct: 178 KLTATIGKTHTTLIFINQIRM--KIGVVYGN-PETTTGGNALKFYASVRIEIRKATAIK- 233
Query: 298 ADKVNIL 304
D NIL
Sbjct: 234 -DGENIL 239
>gi|113866572|ref|YP_725061.1| recombinase A [Ralstonia eutropha H16]
gi|339324718|ref|YP_004684411.1| recombinase A [Cupriavidus necator N-1]
gi|123134402|sp|Q0KE78.1|RECA_CUPNH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|113525348|emb|CAJ91693.1| Recobination protein RecA [Ralstonia eutropha H16]
gi|338164875|gb|AEI75930.1| protein RecA [Cupriavidus necator N-1]
Length = 354
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/249 (48%), Positives = 166/249 (66%), Gaps = 3/249 (1%)
Query: 53 FDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLAL 112
DD+ +K AL ALSQ+ FGK S++ L + V+STGSL LD+AL
Sbjct: 1 MDDKKAGAGVSAEKQKALAAALSQIEKQFGKGSIMRLGDGEVEKDIQVVSTGSLGLDIAL 60
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
G+GGLP+GR+VEIYG E+SGKTTL L V+ E QKLGG CA++D E+ALD S A +G++
Sbjct: 61 GVGGLPRGRVVEIYGPESSGKTTLTLQVVAEMQKLGGTCAFIDAEHALDVSYANKLGVNV 120
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
+LLI+QPD+ E L + D L +SGSID+IV+DSVAAL+PK EI + Q+R+M
Sbjct: 121 GDLLISQPDTGEQALEITDALVRSGSIDLIVIDSVAALVPKAEIEGEMGDSLPGLQARLM 180
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRT 292
+QALRK+ ++ +++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 181 SQALRKLTGTIKRTNCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRI 237
Query: 293 RLFKIADKV 301
K D V
Sbjct: 238 GSIKKGDDV 246
>gi|20178057|sp|Q9APB2.1|RECA_CUPNE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|12659037|gb|AAK01164.1|AF312928_1 RecA [Cupriavidus necator]
Length = 353
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/249 (48%), Positives = 165/249 (66%), Gaps = 3/249 (1%)
Query: 53 FDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLAL 112
DD+ +K AL ALSQ+ FGK S++ L + V+STGSL LD+AL
Sbjct: 1 MDDKKAGAGVSAEKQKALAAALSQIEKQFGKGSIMRLGDGEIEQDIQVVSTGSLGLDIAL 60
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
G+GGLP+GR+VEIYG E+SGKTTL L V+ E QKLGG CA++D E+ALD A +G+D
Sbjct: 61 GVGGLPRGRVVEIYGPESSGKTTLTLQVVAEMQKLGGTCAFIDAEHALDVQYAGKLGVDV 120
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
NLLI+QPD+ E L + D L +SGSID+IV+DSVAAL+PK EI + Q+R+M
Sbjct: 121 GNLLISQPDTGEQALEITDALVRSGSIDLIVIDSVAALVPKAEIEGEMGDSLPGLQARLM 180
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRT 292
+Q LRK+ ++ +++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 181 SQGLRKLTGTIKRTNCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRI 237
Query: 293 RLFKIADKV 301
K D+V
Sbjct: 238 GSIKKGDEV 246
>gi|300122439|emb|CBK23010.2| Recombinase A protein (RecA) [Blastocystis hominis]
Length = 398
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/245 (51%), Positives = 166/245 (67%), Gaps = 10/245 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL+ A+ QL FGK S++ L GS+ PVISTGSL +D ALGIGGLP+GRI
Sbjct: 46 KELALKNAIKQLETQFGKGSVMKL----GSKSHLDVPVISTGSLTVDHALGIGGLPRGRI 101
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTLALH + E QK GG C ++D E+ALDP A +G++ +L I+QPDS
Sbjct: 102 VEIYGPESSGKTTLALHTVAELQKTGGTCTFIDAEHALDPLYASKIGVNINDLYISQPDS 161
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++D+IVVDSVAAL+PK E + + Q+R+M+QALRKI S
Sbjct: 162 GEQALEIADCLVRSGAMDMIVVDSVAALVPKAEAEGNMGDAHMALQARLMSQALRKITGS 221
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
L +S+ L+IF+NQ+R K G G EVT GGNALKFY+++RL + R K D+V
Sbjct: 222 LSRSNCLLIFINQIR--QKVGILFGN-PEVTPGGNALKFYSSVRLDIRRKTAIKEGDEVI 278
Query: 303 ILEVV 307
E V
Sbjct: 279 GYETV 283
>gi|386020153|ref|YP_005938177.1| recombinase A [Pseudomonas stutzeri DSM 4166]
gi|327480125|gb|AEA83435.1| recombinase A [Pseudomonas stutzeri DSM 4166]
Length = 348
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|419955573|ref|ZP_14471699.1| recombinase A [Pseudomonas stutzeri TS44]
gi|387967614|gb|EIK51913.1| recombinase A [Pseudomonas stutzeri TS44]
Length = 352
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|312797180|ref|YP_004030102.1| recombinase A [Burkholderia rhizoxinica HKI 454]
gi|312168955|emb|CBW75958.1| RecA protein [Burkholderia rhizoxinica HKI 454]
Length = 376
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/237 (50%), Positives = 162/237 (68%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL ALSQ+ FGK S++ L V+STGSL LD+ALG+GGLP+GR+VE
Sbjct: 36 EKSKALAAALSQIEKQFGKGSIMRLGHGEAVEDIQVVSTGSLGLDIALGVGGLPRGRVVE 95
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI E QK+GG CA++D E+ALD A +G++A LLI+QPD+ E
Sbjct: 96 IYGPESSGKTTLTLQVIAEMQKIGGTCAFIDAEHALDVQYASKLGVNASELLISQPDTGE 155
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SGSID+IV+DSVAAL+PK EI + Q+R+M+QALRK+ ++
Sbjct: 156 QALEIADALVRSGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTIK 215
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 216 RTNCLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGSIKKNDEV 269
>gi|229577464|ref|YP_001172035.2| recombinase A [Pseudomonas stutzeri A1501]
Length = 348
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|237749552|ref|ZP_04580032.1| recA [Oxalobacter formigenes OXCC13]
gi|229380914|gb|EEO31005.1| recA [Oxalobacter formigenes OXCC13]
Length = 353
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/263 (46%), Positives = 173/263 (65%), Gaps = 12/263 (4%)
Query: 53 FDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLAL 112
DD + +A +K+ AL AL+Q+ FGK S++ + P +STGSL LD+AL
Sbjct: 1 MDD--NKNASNQEKNKALSAALAQIEKQFGKGSVMRMAPGVVVEEIPSVSTGSLGLDIAL 58
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
G+GGLP+GR++EIYG E+SGKTTL L VI E QKLGG CA++D E+ALD A+ +G+
Sbjct: 59 GVGGLPRGRVIEIYGPESSGKTTLTLQVIAEMQKLGGTCAFIDAEHALDVGYAQKLGVHL 118
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
++LLI+QPD+ E L + D L +SG +D+IV+DSVAAL PK EI + Q+R+M
Sbjct: 119 QDLLISQPDTGEQALEITDALVRSGGVDLIVIDSVAALTPKAEIEGDMGDSLPGLQARLM 178
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRT 292
+QALRK+ S+ +++T +IF+NQ+R K G G E T+GGNALKFY+++RL + RT
Sbjct: 179 SQALRKLTGSINKTNTSVIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRT 235
Query: 293 RLFKIADKVNILEVVNIGSMIRL 315
K D+V IGS R+
Sbjct: 236 GSIKSGDEV-------IGSETRV 251
>gi|392420687|ref|YP_006457291.1| recombinase A [Pseudomonas stutzeri CCUG 29243]
gi|390982875|gb|AFM32868.1| recombinase A [Pseudomonas stutzeri CCUG 29243]
Length = 347
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDTHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|409393634|ref|ZP_11244934.1| recombinase A [Pseudomonas sp. Chol1]
gi|409393772|ref|ZP_11245059.1| recombinase A [Pseudomonas sp. Chol1]
gi|409121703|gb|EKM97768.1| recombinase A [Pseudomonas sp. Chol1]
gi|409121776|gb|EKM97838.1| recombinase A [Pseudomonas sp. Chol1]
Length = 352
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|194477062|ref|YP_002049241.1| recombinase A [Paulinella chromatophora]
gi|171192069|gb|ACB43031.1| recombinase A [Paulinella chromatophora]
Length = 367
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 164/238 (68%), Gaps = 5/238 (2%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
DD+ + +D AL LSQ+ +FGK S++ L R ISTG+L LDLALG GG P
Sbjct: 8 DDSHVENRDKALSSVLSQIERNFGKGSIMRLGDAT-RMRVETISTGALTLDLALG-GGYP 65
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGR+VEIYG E+SGKTTL LH I E Q+ GG A++D E+ALDP A A+G+D ENLLI+
Sbjct: 66 KGRVVEIYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAAALGVDIENLLIS 125
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VD L +SG+ID++V+DSVAAL P+ EI + + +Q+R+M+QA+RK
Sbjct: 126 QPDTGEMALEIVDQLVRSGAIDIVVIDSVAALTPRAEIEGEMGDVAMGSQARLMSQAMRK 185
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
I ++ +S +IFLNQ+R K G G E TSGGNALKFYA++RL + R++ K
Sbjct: 186 ITGNIGKSGCTVIFLNQLRL--KIGVTYGN-PETTSGGNALKFYASVRLDIRRSQTLK 240
>gi|325183181|emb|CCA17639.1| protein recA putative [Albugo laibachii Nc14]
Length = 717
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/271 (46%), Positives = 179/271 (66%), Gaps = 10/271 (3%)
Query: 32 DAITCIGMNIHSLSSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKR 91
+ + C+ M+I +LS+ ++ + E H D K NAL +A+ Q+ + FGK S++ L
Sbjct: 334 NVLNCVTMHIQNLSTRSKKISANKE-HSD-----KSNALAMAIRQIESSFGKGSVMQLGS 387
Query: 92 FFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKL-GGY 150
+ R VISTGSL LD ALGIGGLP+GRIVEIYG E+SGKTTLAL I +AQK G
Sbjct: 388 AKIAERVEVISTGSLSLDYALGIGGLPRGRIVEIYGPESSGKTTLALSCIAQAQKKDGAV 447
Query: 151 CAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAAL 210
CA++D E+A+D A A+G++ E L ++QPDS E L + DTL +SG++D++V+DSVAAL
Sbjct: 448 CAFIDAEHAIDAHYANALGVNIEELYVSQPDSGEQALEITDTLIRSGAVDLVVLDSVAAL 507
Query: 211 IPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMD 270
+P+ E+ + Q+R+M+QALRK+ SL +S+ +IFLNQ+R K G G
Sbjct: 508 VPRAELEGEMGDQQIALQARLMSQALRKLTGSLSKSNCTLIFLNQIRH--KVGVIFGS-P 564
Query: 271 EVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
EVTSGG AL++YA++RL + R K D +
Sbjct: 565 EVTSGGTALRYYASVRLDIRRQTQIKQGDAI 595
>gi|169831007|ref|YP_001716989.1| recA protein [Candidatus Desulforudis audaxviator MP104C]
gi|169637851|gb|ACA59357.1| recA protein [Candidatus Desulforudis audaxviator MP104C]
Length = 345
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/234 (47%), Positives = 163/234 (69%), Gaps = 3/234 (1%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
++ + AL LAL+Q+ FGK +++ L G VI TG+L LDLALG+GG+P+GR+
Sbjct: 1 MIDRQKALELALAQIERQFGKGAVMKLGEATGKLSVEVIPTGALALDLALGVGGMPRGRV 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G EASGKTT+ALHVI EAQ++GG A++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 61 IEIFGPEASGKTTVALHVIAEAQRMGGTAAFIDAEHALDPVYAGKVGVDIENLLISQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG++DV+V+DSVAAL+P+ E+ + ++ Q+R+M+QALRK+
Sbjct: 121 GEQALEITEALVRSGAVDVVVIDSVAALVPRAELEGEMGDIHVGLQARLMSQALRKLTAV 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+ +S T+ IF+NQ+R K G G E T GG ALKFY+++RL + R K
Sbjct: 181 IGKSRTVAIFINQIR--EKVGVMFGN-PETTPGGRALKFYSSIRLEVRRLEALK 231
>gi|387129198|ref|YP_006292088.1| recombinase A [Methylophaga sp. JAM7]
gi|386270487|gb|AFJ01401.1| RecA protein [Methylophaga sp. JAM7]
Length = 347
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/237 (48%), Positives = 165/237 (69%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+ AL +AL Q+ FGK +++ L +R +STGS+ LD+ALGIGGLP+GR++E
Sbjct: 4 NRKKALGVALGQIEKQFGKGAVMRLGDGSAARDIEAVSTGSIGLDVALGIGGLPRGRVIE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LH I E QK+GG A++D E+ALDP AE +G++ ++LL++QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHAIAEMQKMGGTAAFVDAEHALDPLYAEKLGVNIDDLLVSQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++D++VVDSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEIADMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIK 183
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 RSNTLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKKGDEI 237
>gi|254419524|ref|ZP_05033248.1| protein RecA [Brevundimonas sp. BAL3]
gi|196185701|gb|EDX80677.1| protein RecA [Brevundimonas sp. BAL3]
Length = 359
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 167/236 (70%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL A++Q+ FGK S++ L + + P +STGSL LD+ALGIGGLP+GR++E+
Sbjct: 16 KQRALEAAIAQIDRAFGKGSVMKLGKGGVADVIPSVSTGSLGLDMALGIGGLPRGRVIEV 75
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTLALH + E QK GG A++D E+ALDP A+ +G++ ++LL++QPD+ E
Sbjct: 76 FGPESSGKTTLALHTVAEVQKAGGTAAFVDAEHALDPGYAQKLGVNLDDLLVSQPDTGEQ 135
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L +VDTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 136 ALEIVDTLVRSGAVDIVVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +++F+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 196 SNCIVLFINQIRH--KIGVMYGS-PETTTGGNALKFYASVRLDIRRTGAIKNRDEV 248
>gi|347540647|ref|YP_004848072.1| recombinase A [Pseudogulbenkiania sp. NH8B]
gi|345643825|dbj|BAK77658.1| RecA protein [Pseudogulbenkiania sp. NH8B]
Length = 351
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/226 (51%), Positives = 160/226 (70%), Gaps = 3/226 (1%)
Query: 76 QLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTT 135
Q+ FGK S++ + + VISTGSL LDLALG+GGLP+GR+VEIYG E+SGKTT
Sbjct: 18 QIEKQFGKGSIMRMSDNQITENLQVISTGSLGLDLALGVGGLPRGRVVEIYGPESSGKTT 77
Query: 136 LALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTK 195
L L V+ EAQKLGG CAY+D ENALDP+ A+ +G++ E+LLI+QPD+ E L + D L +
Sbjct: 78 LCLQVVAEAQKLGGTCAYIDAENALDPTYAQKLGVNVEDLLISQPDTGEQALEICDMLVR 137
Query: 196 SGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQ 255
S +DVIVVDSVAAL+PK EI + + +R+M+QALRK+ ++ +++TL+IF+NQ
Sbjct: 138 SSGVDVIVVDSVAALVPKAEIEGEMGDNHVGLHARLMSQALRKLTGNIKRTNTLVIFINQ 197
Query: 256 VRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+R K G G E T+GGNALKFYA++RL + R K +++
Sbjct: 198 IRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGGIKKGEEI 240
>gi|3219852|sp|P95469.1|RECA_PARDE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|1825468|gb|AAB51561.1| recA [Paracoccus denitrificans]
Length = 356
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/244 (49%), Positives = 165/244 (67%), Gaps = 3/244 (1%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
+D + K AL AL+Q+ FGK S++ L STGSL LD+ALGIGGLP
Sbjct: 10 NDKRSADKQKALDSALAQIERQFGKGSIMKLGADNPVAEIEATSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRI+EI+G E+SGKTTL LHV+ E QK GG CA++D E+ALDP A+ +G++ + LLI+
Sbjct: 70 KGRIIEIFGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VDTL SG++ ++VVDSVAAL PK EI + M +Q+R+M+QA+RK
Sbjct: 130 QPDTGEQALEIVDTLVASGAVSLVVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 190 LTASIGRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRAGSIKDR 246
Query: 299 DKVN 302
D+V
Sbjct: 247 DEVT 250
>gi|398877414|ref|ZP_10632560.1| protein RecA [Pseudomonas sp. GM67]
gi|398884515|ref|ZP_10639448.1| protein RecA [Pseudomonas sp. GM60]
gi|398194324|gb|EJM81400.1| protein RecA [Pseudomonas sp. GM60]
gi|398202577|gb|EJM89418.1| protein RecA [Pseudomonas sp. GM67]
Length = 352
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 KNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|393770644|ref|ZP_10359123.1| recombination protein RecA [Novosphingobium sp. Rr 2-17]
gi|392723991|gb|EIZ81377.1| recombination protein RecA [Novosphingobium sp. Rr 2-17]
Length = 356
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/241 (49%), Positives = 168/241 (69%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M + AL AL+Q+ FGK S + L GS+ ISTGSL LD+ALG+GGLP+G
Sbjct: 17 MDRQKALEAALAQIDKAFGKGSAMKL----GSKETMQVESISTGSLGLDIALGVGGLPRG 72
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
R++EIYG E+SGKTTLALHVI EAQK GG A++D E+ALDP A+ +G++ + L+++QP
Sbjct: 73 RVIEIYGPESSGKTTLALHVIAEAQKTGGTAAFIDAEHALDPVYAKKLGVNIDELIVSQP 132
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L +VDTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+Q+LRK+
Sbjct: 133 DTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLT 192
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+
Sbjct: 193 GSISRSRCMVIFINQLRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRTGQIKDRDE 249
Query: 301 V 301
+
Sbjct: 250 I 250
>gi|404402540|ref|ZP_10994124.1| recombinase A [Pseudomonas fuscovaginae UPB0736]
Length = 354
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPSISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|406945512|gb|EKD76979.1| hypothetical protein ACD_42C00513G0003 [uncultured bacterium]
Length = 349
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/236 (49%), Positives = 164/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FG+ +++SL + VISTGSL LD+ALGIGGLP+GR+VEI
Sbjct: 5 KSKALSAALSQIEKQFGRGAIMSLGDGQAEKDISVISTGSLGLDVALGIGGLPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L I E QK GG A++D E+ALDP AE +G+D + LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQTIAECQKAGGTAAFVDAEHALDPIYAEKLGVDIKKLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D++V+DSVAAL P+ EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSGAVDMVVIDSVAALTPRAEIEGDMGDSHMGLQARLMSQALRKLTANIKK 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+TL++F+NQ+R K G G E T+GGNALKFYA++RL + RT K +++
Sbjct: 185 SNTLVVFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKKGEEI 237
>gi|120598088|ref|YP_962662.1| recombinase A [Shewanella sp. W3-18-1]
gi|146293841|ref|YP_001184265.1| recombinase A [Shewanella putrefaciens CN-32]
gi|386314590|ref|YP_006010755.1| recA protein [Shewanella putrefaciens 200]
gi|166220680|sp|A4Y933.1|RECA_SHEPC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|166220682|sp|A1RHG3.1|RECA_SHESW RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|120558181|gb|ABM24108.1| recA protein [Shewanella sp. W3-18-1]
gi|145565531|gb|ABP76466.1| recA protein [Shewanella putrefaciens CN-32]
gi|319427215|gb|ADV55289.1| recA protein [Shewanella putrefaciens 200]
Length = 357
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/239 (52%), Positives = 162/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL LSQ+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KEKALAAVLSQIEKQFGKGSIMKL----GEDRSMDVETISTGSLSLDVALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDGDEV 238
>gi|77457402|ref|YP_346907.1| recombinase A [Pseudomonas fluorescens Pf0-1]
gi|398965158|ref|ZP_10680824.1| protein RecA [Pseudomonas sp. GM30]
gi|398976912|ref|ZP_10686722.1| protein RecA [Pseudomonas sp. GM25]
gi|424921731|ref|ZP_18345092.1| RecA [Pseudomonas fluorescens R124]
gi|123772305|sp|Q3KH38.1|RECA_PSEPF RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|77381405|gb|ABA72918.1| recombinase A [Pseudomonas fluorescens Pf0-1]
gi|379772230|gb|AFD18719.1| recombinase A [Pseudomonas fluorescens]
gi|398138795|gb|EJM27809.1| protein RecA [Pseudomonas sp. GM25]
gi|398147612|gb|EJM36316.1| protein RecA [Pseudomonas sp. GM30]
gi|404302891|gb|EJZ56853.1| RecA [Pseudomonas fluorescens R124]
Length = 352
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 KNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|398930943|ref|ZP_10664874.1| protein RecA [Pseudomonas sp. GM48]
gi|398949318|ref|ZP_10673197.1| protein RecA [Pseudomonas sp. GM33]
gi|426408038|ref|YP_007028137.1| recombinase A [Pseudomonas sp. UW4]
gi|398159377|gb|EJM47680.1| protein RecA [Pseudomonas sp. GM33]
gi|398164466|gb|EJM52602.1| protein RecA [Pseudomonas sp. GM48]
gi|426266255|gb|AFY18332.1| recombinase A [Pseudomonas sp. UW4]
Length = 352
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 KNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|398893160|ref|ZP_10645978.1| protein RecA [Pseudomonas sp. GM55]
gi|398184633|gb|EJM72075.1| protein RecA [Pseudomonas sp. GM55]
Length = 352
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 KNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|114771070|ref|ZP_01448510.1| recombinase A [Rhodobacterales bacterium HTCC2255]
gi|114548352|gb|EAU51238.1| recombinase A [alpha proteobacterium HTCC2255]
Length = 362
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/240 (49%), Positives = 162/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K M K+ AL AL Q+ FGK S++ L STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSMDKEKALESALGQIERQFGKGSIMKLGDESARLDIEATSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTL LH I E QK GG CA++D E+ALDP+ A+ +G+D + LLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLTLHAIAEEQKKGGVCAFVDAEHALDPTYAKRLGVDIDELLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++ ++VVDSVAAL P+ E+ + AQ+R+M+QA+RK+
Sbjct: 132 AGEQALEITDTLVRSGAVSMVVVDSVAALTPRAELEGDMGDHQVGAQARLMSQAMRKLTG 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E TSGGNALKFY+++RL + R K D++
Sbjct: 192 SIAKSGCMVIFINQIRM--KIGVMFGS-PETTSGGNALKFYSSVRLDIRRIGAIKDRDEI 248
>gi|452748552|ref|ZP_21948330.1| recombinase A [Pseudomonas stutzeri NF13]
gi|452007458|gb|EMD99712.1| recombinase A [Pseudomonas stutzeri NF13]
Length = 347
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/237 (50%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTT+ L VI EAQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTMTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|398874988|ref|ZP_10630185.1| protein RecA [Pseudomonas sp. GM74]
gi|398913777|ref|ZP_10656636.1| protein RecA [Pseudomonas sp. GM49]
gi|398179862|gb|EJM67461.1| protein RecA [Pseudomonas sp. GM49]
gi|398193651|gb|EJM80749.1| protein RecA [Pseudomonas sp. GM74]
Length = 352
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 KNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|398984121|ref|ZP_10690430.1| protein RecA [Pseudomonas sp. GM24]
gi|399011254|ref|ZP_10713586.1| protein RecA [Pseudomonas sp. GM16]
gi|398117996|gb|EJM07736.1| protein RecA [Pseudomonas sp. GM16]
gi|398156238|gb|EJM44662.1| protein RecA [Pseudomonas sp. GM24]
Length = 351
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 KNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|334142450|ref|YP_004535658.1| recombination protein RecA [Novosphingobium sp. PP1Y]
gi|359401185|ref|ZP_09194156.1| recombination protein RecA [Novosphingobium pentaromativorans
US6-1]
gi|333940482|emb|CCA93840.1| recombination protein RecA [Novosphingobium sp. PP1Y]
gi|357597434|gb|EHJ59181.1| recombination protein RecA [Novosphingobium pentaromativorans
US6-1]
Length = 358
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/245 (49%), Positives = 168/245 (68%), Gaps = 10/245 (4%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGG 116
D M + AL AL+Q+ FGK S + L GS+ ISTGSL LD+ALG+GG
Sbjct: 13 DKDSMDRQKALDAALAQIDRAFGKGSAMKL----GSKETMQVEAISTGSLGLDIALGVGG 68
Query: 117 LPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLL 176
LPKGR++E+YG E+SGKTTLALHVI EAQK GG A++D E+ALDP A+ +G+D + L+
Sbjct: 69 LPKGRVIEVYGPESSGKTTLALHVIAEAQKAGGTAAFIDAEHALDPVYAKKLGVDIDELI 128
Query: 177 IAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQAL 236
++QPD+ E L + DTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+Q+L
Sbjct: 129 VSQPDTGEQALEITDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSL 188
Query: 237 RKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
RK+ S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K
Sbjct: 189 RKLTGSINRSKCMVIFINQLRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRTGQIK 245
Query: 297 IADKV 301
D++
Sbjct: 246 DRDEI 250
>gi|398866414|ref|ZP_10621908.1| protein RecA [Pseudomonas sp. GM78]
gi|398240644|gb|EJN26313.1| protein RecA [Pseudomonas sp. GM78]
Length = 352
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 KNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|389690298|ref|ZP_10179315.1| protein RecA [Microvirga sp. WSM3557]
gi|388589816|gb|EIM30104.1| protein RecA [Microvirga sp. WSM3557]
Length = 347
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/239 (49%), Positives = 167/239 (69%), Gaps = 8/239 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGR 121
+ K+ A+ A++Q+ FGK +++ R G + V ISTGSL LD+ALG+GGLPKGR
Sbjct: 3 LDKNKAIETAVAQIERAFGKGAIM---RLGGDQVVEVETISTGSLGLDIALGVGGLPKGR 59
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTL LH I EAQK GG CA++D E+ALDP A +G++ ++L+++QPD
Sbjct: 60 IIEIYGPESSGKTTLTLHAIAEAQKKGGVCAFIDAEHALDPVYARKLGVNLDDLIVSQPD 119
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
E L + DT+ +SG+IDV+++DSVAAL PK EI + Q+R+M+QALRK+
Sbjct: 120 HGEQALEIADTMVRSGAIDVVIIDSVAALTPKAEIEGEMGESRPGLQARLMSQALRKLTG 179
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+
Sbjct: 180 SIHRTNTLVIFINQIRM--KIGVTYGS-PETTTGGNALKFYASVRLDIRRTSTLKDRDE 235
>gi|398849432|ref|ZP_10606173.1| protein RecA [Pseudomonas sp. GM80]
gi|398250917|gb|EJN36208.1| protein RecA [Pseudomonas sp. GM80]
Length = 351
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 KNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|317121901|ref|YP_004101904.1| recombinase A [Thermaerobacter marianensis DSM 12885]
gi|315591881|gb|ADU51177.1| RecA protein [Thermaerobacter marianensis DSM 12885]
Length = 340
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/234 (48%), Positives = 162/234 (69%), Gaps = 3/234 (1%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+++++ AL +ALSQ+ FGK S++ + VI TGSL LD+ALG+GG+P+GRI
Sbjct: 1 MIERERALEIALSQIEKQFGKGSIMRMGEASSRLNVEVIPTGSLALDIALGVGGMPRGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G EASGKTT+ALHV AQ+ GG A++D E+ALDP AE +G+D NLLI+QPD+
Sbjct: 61 IEIFGPEASGKTTVALHVAASAQRAGGVAAFIDAEHALDPVYAENLGVDINNLLISQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG++DVIV+DSVAAL+P+ EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEIAEALVRSGAVDVIVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGA 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+ +S T +IF+NQ+R K G G EVT GG ALKFYA++RL + R K
Sbjct: 181 IAKSRTCLIFINQIR--EKVGVMFGN-PEVTPGGRALKFYASVRLDVRRVETLK 231
>gi|399003123|ref|ZP_10705794.1| protein RecA [Pseudomonas sp. GM18]
gi|398123527|gb|EJM13076.1| protein RecA [Pseudomonas sp. GM18]
Length = 350
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 KNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|114562240|ref|YP_749753.1| recombinase A [Shewanella frigidimarina NCIMB 400]
gi|122300464|sp|Q086A0.1|RECA_SHEFN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|114333533|gb|ABI70915.1| recA protein [Shewanella frigidimarina NCIMB 400]
Length = 354
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/240 (52%), Positives = 162/240 (67%), Gaps = 10/240 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
K+ AL LSQ+ FGK S++ L G R ISTGSL LD+ALG GGLP GR
Sbjct: 6 NKEKALAAVLSQIEKQFGKGSIMKL----GEDRTMDVETISTGSLSLDIALGAGGLPMGR 61
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD
Sbjct: 62 IVEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPD 121
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D LT+SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+
Sbjct: 122 TGEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAG 181
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 NLKQSNTLLIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAIKDGDEV 238
>gi|398859889|ref|ZP_10615554.1| protein RecA [Pseudomonas sp. GM79]
gi|398235825|gb|EJN21632.1| protein RecA [Pseudomonas sp. GM79]
Length = 350
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 KNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|398843169|ref|ZP_10600319.1| protein RecA [Pseudomonas sp. GM102]
gi|398902815|ref|ZP_10651269.1| protein RecA [Pseudomonas sp. GM50]
gi|398942995|ref|ZP_10670633.1| protein RecA [Pseudomonas sp. GM41(2012)]
gi|407366114|ref|ZP_11112646.1| recombinase A [Pseudomonas mandelii JR-1]
gi|296932699|gb|ADH93503.1| recombinase A [Pseudomonas sp. In5]
gi|398103987|gb|EJL94146.1| protein RecA [Pseudomonas sp. GM102]
gi|398159926|gb|EJM48212.1| protein RecA [Pseudomonas sp. GM41(2012)]
gi|398177908|gb|EJM65569.1| protein RecA [Pseudomonas sp. GM50]
Length = 350
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 KNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|429330738|ref|ZP_19211520.1| recombinase A [Pseudomonas putida CSV86]
gi|428764518|gb|EKX86651.1| recombinase A [Pseudomonas putida CSV86]
Length = 355
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/237 (50%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTT+ L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTMTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|158320574|ref|YP_001513081.1| recA protein [Alkaliphilus oremlandii OhILAs]
gi|158140773|gb|ABW19085.1| recA protein [Alkaliphilus oremlandii OhILAs]
Length = 352
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/238 (49%), Positives = 166/238 (69%), Gaps = 4/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M+K AL +ALSQ+ FGK S++ L +STGS+ LD+ALGIGG+PKGRI+
Sbjct: 1 MEKKKALDMALSQIEKQFGKGSIMKLGED-AKLNLESVSTGSIGLDVALGIGGIPKGRII 59
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT++LHVI E QK GG A++D E+ALDPS A+ +G+D ENL+++QPD+
Sbjct: 60 EIYGPESSGKTTVSLHVIAETQKRGGIAAFIDAEHALDPSYAKNLGVDIENLIVSQPDTG 119
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + + L +SG++D+IVVDSVAAL+PK EI + + Q+R+M+QALRK+ S+
Sbjct: 120 EQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLAGSI 179
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T+ IF+NQ+R K G G E T+GG ALKFYA++RL + + K + V
Sbjct: 180 SKSNTIAIFINQLR--EKIGVMFG-TPETTTGGRALKFYASVRLDVRKVDSIKQGNDV 234
>gi|226737763|sp|B8CJQ6.1|RECA_SHEPW RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|212555699|gb|ACJ28153.1| RecA bacterial DNA recombination protein [Shewanella piezotolerans
WP3]
Length = 355
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 161/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL L Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KEKALNAVLGQIEKQFGKGSIMKL----GEDRSMDVETISTGSLSLDVALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQK G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLEVIAAAQKQGKTCAFIDAEHALDPVYAQKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDRDEV 238
>gi|345862875|ref|ZP_08815089.1| protein RecA [endosymbiont of Tevnia jerichonana (vent Tica)]
gi|345876718|ref|ZP_08828482.1| putative RecA protein [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|344226217|gb|EGV52556.1| putative RecA protein [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|345126217|gb|EGW56083.1| protein RecA [endosymbiont of Tevnia jerichonana (vent Tica)]
Length = 342
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 161/233 (69%), Gaps = 3/233 (1%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL AL Q+ FGK S++ + R ISTGSL LD+ALG+GGLPKGR+VEIYG
Sbjct: 8 ALSAALGQIEKQFGKGSVMRMGDSGSIRNIEAISTGSLGLDIALGVGGLPKGRVVEIYGP 67
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTTL L V+ EAQK GG CA++D E+ALDP AE +G++ + LL++QPD+ E L
Sbjct: 68 ESSGKTTLTLQVVAEAQKQGGTCAFIDAEHALDPIYAEKIGVNVDELLVSQPDTGEQALE 127
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ D L +SG++DV+V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +++
Sbjct: 128 ITDMLVRSGAVDVVVIDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLTANIKRTNC 187
Query: 249 LIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L+IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 188 LVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIKKGEEV 237
>gi|452995305|emb|CCQ93072.1| multifunctional SOS repair factor [Clostridium ultunense Esp]
Length = 350
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 169/237 (71%), Gaps = 4/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K+ AL +A+SQ+ FGK S++ L + + VI TGSL+LD+ALGIGG+P+GRI+E
Sbjct: 6 EKNKALDMAISQIEKQFGKGSIMRLGDT-KTVKMEVIPTGSLELDIALGIGGVPRGRIIE 64
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTT+ALHVI EAQK G A++D E+ALDP+ A+ +G+D ENL+++QPD+ E
Sbjct: 65 IYGPESSGKTTVALHVIAEAQKRDGIAAFIDAEHALDPNYAKKLGVDVENLIVSQPDTGE 124
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + + L +SG++D++VVDSVAAL+PK EI + + Q+R+M+QALRK+ ++
Sbjct: 125 QGLEITEALVRSGAVDIVVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLAGAIN 184
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T +IF+NQ+R K G G E T+GG ALKFY+++RL + R K D V
Sbjct: 185 KSNTTVIFINQLR--EKVGVMFGN-PETTTGGRALKFYSSIRLDVRRVDSIKQGDNV 238
>gi|410478671|ref|YP_006766308.1| recombinase A [Leptospirillum ferriphilum ML-04]
gi|424869559|ref|ZP_18293256.1| RecA protein [Leptospirillum sp. Group II 'C75']
gi|124514183|gb|EAY55698.1| RecA protein [Leptospirillum rubarum]
gi|387220610|gb|EIJ75269.1| RecA protein [Leptospirillum sp. Group II 'C75']
gi|406773923|gb|AFS53348.1| RecA protein [Leptospirillum ferriphilum ML-04]
Length = 360
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/236 (48%), Positives = 165/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ +L LA+SQ+ FGK S++ L + + PVI +GSL LD+ALGIGG P+GR+VE+
Sbjct: 9 RQKSLDLAVSQIEKQFGKGSIMRLGKDQVPQNVPVIPSGSLALDIALGIGGYPRGRVVEL 68
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I E K GG A++D E+ALD + A+ +G+ E+LLIAQPD+ E
Sbjct: 69 YGPESSGKTTLALHAISEVHKAGGVAAFIDAEHALDVTYAKRLGVRTEDLLIAQPDTGEQ 128
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + +TL +SGSID+IVVDSVAAL+P+ E+ + + Q+R+M+QALRK+ ++ +
Sbjct: 129 ALEITETLVRSGSIDLIVVDSVAALVPRAELEGEMGDAHVGLQARLMSQALRKLTSAISK 188
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+T ++F+NQ+R K G G E T+GGNALKFYA++R+ + R K D+V
Sbjct: 189 SNTTVLFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRMDIRRIESIKEGDQV 241
>gi|113969469|ref|YP_733262.1| recombinase A [Shewanella sp. MR-4]
gi|114046702|ref|YP_737252.1| recombinase A [Shewanella sp. MR-7]
gi|122944845|sp|Q0HXG0.1|RECA_SHESR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|123130637|sp|Q0HL62.1|RECA_SHESM RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|113884153|gb|ABI38205.1| recA protein [Shewanella sp. MR-4]
gi|113888144|gb|ABI42195.1| recA protein [Shewanella sp. MR-7]
Length = 357
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/240 (52%), Positives = 162/240 (67%), Gaps = 10/240 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
K+ AL LSQ+ FGK S++ L G R ISTGSL LD+ALG GGLP GR
Sbjct: 6 NKEKALAAVLSQIEKQFGKGSIMKL----GEDRSMDVETISTGSLSLDVALGAGGLPMGR 61
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD
Sbjct: 62 IVEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPD 121
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+
Sbjct: 122 TGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAG 181
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 NLKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKEGDEV 238
>gi|443469641|ref|ZP_21059795.1| RecA protein [Pseudomonas pseudoalcaligenes KF707]
gi|442899093|gb|ELS25624.1| RecA protein [Pseudomonas pseudoalcaligenes KF707]
Length = 351
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQKLG CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKLGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K ++V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAVKEGEEV 236
>gi|91792566|ref|YP_562217.1| recombinase A [Shewanella denitrificans OS217]
gi|122968879|sp|Q12PY2.1|RECA_SHEDO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|91714568|gb|ABE54494.1| recA protein [Shewanella denitrificans OS217]
Length = 353
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/239 (52%), Positives = 162/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL LSQ+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KEKALAAVLSQIEKQFGKGSIMKL----GEDRTMDVETISTGSLSLDVALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDGDEV 238
>gi|304321908|ref|YP_003855551.1| recombinase A [Parvularcula bermudensis HTCC2503]
gi|303300810|gb|ADM10409.1| recombinase A [Parvularcula bermudensis HTCC2503]
Length = 360
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/242 (52%), Positives = 164/242 (67%), Gaps = 11/242 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPK 119
M K AL ALSQ+ FGK S++ L GS+ V ISTGSL LD+ALGIGGLPK
Sbjct: 12 MDKSKALEAALSQIDKAFGKGSVMKL----GSQDKIVQIEGISTGSLGLDIALGIGGLPK 67
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRIVEIYG E+SGKTTLALH E+QK GG A++D E+ALDP A +G+ + LLI+Q
Sbjct: 68 GRIVEIYGPESSGKTTLALHCAAESQKAGGTAAFIDAEHALDPIYASKLGVKLDELLISQ 127
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG+IDV+V+DSVAAL PK E+ + Q+R+M+QALRK+
Sbjct: 128 PDTGEQALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKL 187
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
S+ +S+ L+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D
Sbjct: 188 TGSISRSNCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGALKARD 244
Query: 300 KV 301
+V
Sbjct: 245 EV 246
>gi|73540233|ref|YP_294753.1| recombinase A [Ralstonia eutropha JMP134]
gi|123760257|sp|Q475M4.1|RECA_CUPPJ RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|72117646|gb|AAZ59909.1| RecA protein [Ralstonia eutropha JMP134]
Length = 353
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/249 (48%), Positives = 165/249 (66%), Gaps = 3/249 (1%)
Query: 53 FDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLAL 112
DD+ +K AL ALSQ+ FGK S++ + + V+STGSL LD+AL
Sbjct: 1 MDDKKAGAGLSAEKQKALAAALSQIEKQFGKGSIMRMGDGEVEKDIQVVSTGSLGLDIAL 60
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
G+GGLP+GR+VEIYG E+SGKTTL L V+ E QKLGG CA++D E+ALD + A +G+D
Sbjct: 61 GVGGLPRGRVVEIYGPESSGKTTLTLQVVAEMQKLGGTCAFIDAEHALDVNYASKLGVDV 120
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
LLI+QPD+ E L + D L +SGSID+IV+DSVAAL+PK EI + Q+R+M
Sbjct: 121 GELLISQPDTGEQALEITDALVRSGSIDLIVIDSVAALVPKAEIEGEMGDSLPGLQARLM 180
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRT 292
+QALRK+ ++ +++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 181 SQALRKLTGTIKRTNCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRI 237
Query: 293 RLFKIADKV 301
K D V
Sbjct: 238 GSIKKGDDV 246
>gi|398996620|ref|ZP_10699471.1| protein RecA [Pseudomonas sp. GM21]
gi|398126203|gb|EJM15646.1| protein RecA [Pseudomonas sp. GM21]
Length = 350
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 KNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|53802433|ref|YP_112918.1| recombinase A [Methylococcus capsulatus str. Bath]
gi|59798161|sp|Q60BS8.1|RECA_METCA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|53756194|gb|AAU90485.1| recA protein [Methylococcus capsulatus str. Bath]
Length = 347
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 163/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ + R VI TGSL LD+ALG GGLP+GRIVEI
Sbjct: 5 KRKALGAALSQIEKQFGKGSVMRMGDVAAVRDIDVIPTGSLALDIALGCGGLPRGRIVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI +AQK GG A++D E+ALDP AE +G++ ++LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLEVIAQAQKTGGVAAFVDAEHALDPVYAEKIGVNLDDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG +DV+V+DSVAAL PK E+ + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIADVLVRSGGVDVVVIDSVAALTPKAELEGEMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R+ K D+V
Sbjct: 185 SNTLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRSGAIKNGDEV 237
>gi|24374940|ref|NP_718983.1| recombinase A RecA [Shewanella oneidensis MR-1]
gi|30173289|sp|Q8EBS0.1|RECA_SHEON RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|24349655|gb|AAN56427.1| recombinase A RecA [Shewanella oneidensis MR-1]
Length = 357
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/240 (52%), Positives = 162/240 (67%), Gaps = 10/240 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
K+ AL LSQ+ FGK S++ L G R ISTGSL LD+ALG GGLP GR
Sbjct: 6 NKEKALAAVLSQIEKQFGKGSIMKL----GEDRSMDVETISTGSLSLDVALGAGGLPMGR 61
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD
Sbjct: 62 IVEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPD 121
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+
Sbjct: 122 TGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAG 181
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 NLKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKEGDEV 238
>gi|410584495|ref|ZP_11321598.1| protein RecA [Thermaerobacter subterraneus DSM 13965]
gi|410504430|gb|EKP93941.1| protein RecA [Thermaerobacter subterraneus DSM 13965]
Length = 340
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/234 (48%), Positives = 163/234 (69%), Gaps = 3/234 (1%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+++++ AL +AL+Q+ FGK S++ + VI TGSL LD+ALG+GG+P+GRI
Sbjct: 1 MIERERALEMALNQIEKQFGKGSIMRMGEASARLNVEVIPTGSLALDIALGVGGMPRGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G EASGKTT+ALHV+ AQ+ GG A++D E+ALDP AE +G+D NLLI+QPD+
Sbjct: 61 IEIFGPEASGKTTVALHVVASAQRSGGVAAFIDAEHALDPVYAENLGVDINNLLISQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG++DVIV+DSVAAL+P+ EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEIAEALVRSGAVDVIVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGA 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+ +S T +IF+NQ+R K G G EVT GG ALKFYA++RL + R K
Sbjct: 181 IAKSRTCLIFINQIR--EKVGVMFGN-PEVTPGGRALKFYASVRLDVRRVETLK 231
>gi|392951170|ref|ZP_10316725.1| RecA protein [Hydrocarboniphaga effusa AP103]
gi|391860132|gb|EIT70660.1| RecA protein [Hydrocarboniphaga effusa AP103]
Length = 338
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 164/238 (68%), Gaps = 10/238 (4%)
Query: 68 NALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKGRIVE 124
AL AL Q+ FGK +++ + G+ P VISTGS+ LD ALGIGG+P+GR+VE
Sbjct: 7 KALEAALGQIDKQFGKGTIMRM----GANERPEIEVISTGSITLDAALGIGGVPRGRVVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTT ALHV +AQK+GG CAY+D E+ALD + AE +G+ +LLI+QPD+ E
Sbjct: 63 IYGPESSGKTTFALHVTAQAQKIGGTCAYIDAEHALDVTYAERLGVQVGDLLISQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVIV+DSVAAL+PK EI + Q+R+M+QALRK+ S+
Sbjct: 123 QALEIADMLVRSNAVDVIVIDSVAALVPKSEIEGEMGDAAVGVQARLMSQALRKLTGSIN 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGL-GRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S TLIIF+NQ+R K G + G+ E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 RSKTLIIFINQLRM--KIGVMMPGQSPETTTGGNALKFYASMRLDIRRIGAIKKGDEV 238
>gi|117919575|ref|YP_868767.1| recombinase A [Shewanella sp. ANA-3]
gi|166220681|sp|A0KU92.1|RECA_SHESA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|117611907|gb|ABK47361.1| recA protein [Shewanella sp. ANA-3]
Length = 357
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 162/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL LSQ+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KEKALAAVLSQIEKQFGKGSIMKL----GEDRSMDVETISTGSLSLDVALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKEGDEV 238
>gi|256371456|ref|YP_003109280.1| recA protein [Acidimicrobium ferrooxidans DSM 10331]
gi|256008040|gb|ACU53607.1| recA protein [Acidimicrobium ferrooxidans DSM 10331]
Length = 346
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 162/236 (68%), Gaps = 10/236 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M +D AL A++Q+ FGK S++ + I TG++ LDLALG+GGLP+GRIV
Sbjct: 1 MDRDKALETAIAQIEKQFGKGSIMRMGEH-PEMAIESIPTGAMALDLALGVGGLPRGRIV 59
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGK+TLALHV+ EAQ+ GG CAY+D E+ALDP A+A+G+D + LLI+QPD
Sbjct: 60 EIYGPESSGKSTLALHVVAEAQRQGGRCAYIDAEHALDPVYAQAIGVDVDQLLISQPDYG 119
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SGSIDV++VDSVAAL PK EI I + Q+R+M+QALRK+ +L
Sbjct: 120 EQALEIADLLIRSGSIDVVIVDSVAALTPKAEIEGDIGDSHVGLQARLMSQALRKLTANL 179
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRM---DEVTSGGNALKFYAALRLRMMRTRLFK 296
+++TL +F+NQ+R + +G M EVT GG ALKFY+++RL + R K
Sbjct: 180 SKTNTLAVFINQLR------EKIGVMYGSPEVTPGGRALKFYSSVRLDIRRVESIK 229
>gi|85374373|ref|YP_458435.1| recombinase A [Erythrobacter litoralis HTCC2594]
gi|84787456|gb|ABC63638.1| recombinase A [Erythrobacter litoralis HTCC2594]
Length = 352
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/249 (48%), Positives = 172/249 (69%), Gaps = 16/249 (6%)
Query: 62 KIMQKDN------ALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLAL 112
K+++K+N AL AL+Q+ FGK S + L GS+ ISTGSL LD+AL
Sbjct: 6 KLVEKENNVDRQKALDAALAQIDRAFGKGSAMKL----GSKEAMNVEAISTGSLGLDIAL 61
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
GIGGLPKGR++E+YG E+SGKTTLALH I EAQK GG A++D E+ALDP A+A+G+D
Sbjct: 62 GIGGLPKGRVIEVYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPVYAKALGVDI 121
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
+ L+++QPD+ E L + DTL +S ++D++VVDSVAAL+P+ EI + + Q+R+M
Sbjct: 122 DELIVSQPDTGEQALEITDTLVRSNAVDILVVDSVAALVPRAEIEGEMGDSHVGLQARLM 181
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRT 292
+Q+LRK+ S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT
Sbjct: 182 SQSLRKLTGSINRSKCMVIFINQLRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRT 238
Query: 293 RLFKIADKV 301
K D+V
Sbjct: 239 GQIKDRDEV 247
>gi|147677636|ref|YP_001211851.1| RecA/RadA recombinase [Pelotomaculum thermopropionicum SI]
gi|146273733|dbj|BAF59482.1| RecA/RadA recombinase [Pelotomaculum thermopropionicum SI]
Length = 342
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 161/231 (69%), Gaps = 3/231 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL LAL Q+ FGK S++ L VI TG+L LD+ALG+GG+P+GR++EI
Sbjct: 4 RQKALELALMQIERQFGKGSIMKLGEASAKLNVEVIPTGALALDIALGVGGVPRGRVIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTT+ALHVI EAQK+GG A++D E+ALDP A+ +G+D ENLL++QPD+ E
Sbjct: 64 FGPESSGKTTVALHVIAEAQKMGGTAAFVDAEHALDPVYAKNLGVDIENLLVSQPDTGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG++DVIVVDSVAAL+P+ EI + + Q+R+M+QALRK+ ++ +
Sbjct: 124 ALEIAEALVRSGAVDVIVVDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAISK 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
S T +IF+NQ+R K G G E T+GG ALKFYA++RL + + K
Sbjct: 184 SRTTVIFINQIR--EKVGVVYGS-PETTTGGRALKFYASIRLEVRKQENIK 231
>gi|108804260|ref|YP_644197.1| recA protein [Rubrobacter xylanophilus DSM 9941]
gi|123177369|sp|Q1AW43.1|RECA_RUBXD RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|108765503|gb|ABG04385.1| RecA protein [Rubrobacter xylanophilus DSM 9941]
Length = 344
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/238 (50%), Positives = 164/238 (68%), Gaps = 4/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL A+SQ+ FGK S++ + S++ ISTGSL LDLALG+GG+P+GRIV
Sbjct: 3 LDKSKALDTAVSQIERQFGKGSIMRMGDR-ASQKVASISTGSLALDLALGVGGVPRGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTLALH+I EAQ+ GG A++D E+ALDP+ AEA+G+D ENL +QPDS
Sbjct: 62 EIFGPESSGKTTLALHIIAEAQRAGGLAAFIDAEHALDPTYAEAIGVDLENLYFSQPDSG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++D +V+DSVAAL+P+ EI + + Q+R+M+QALRK+ SL
Sbjct: 122 EQALEIADTLVRSGALDAVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLSGSL 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S T IF+NQ+R K G G E T GG ALKFYA++R+ + R K ++
Sbjct: 182 SRSGTTAIFINQLR--EKIGVMFGS-PETTPGGRALKFYASVRMDIRRIGALKAGNET 236
>gi|430760747|ref|YP_007216604.1| RecA protein [Thioalkalivibrio nitratireducens DSM 14787]
gi|430010371|gb|AGA33123.1| RecA protein [Thioalkalivibrio nitratireducens DSM 14787]
Length = 347
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/243 (47%), Positives = 165/243 (67%), Gaps = 3/243 (1%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
+DA + AL AL Q+ FGK +++ + R VISTGSL LD+ALGIGGLP
Sbjct: 2 EDAVDENRKKALAAALGQIERQFGKGAVMRMGDGTAVRDVEVISTGSLALDVALGIGGLP 61
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GR+VE+YG E+SGKTTL L V+ E QKLGG A++D E+ALDP A+ +G+ + LLI+
Sbjct: 62 RGRVVEVYGPESSGKTTLTLQVVAECQKLGGTAAFIDAEHALDPGYAQKLGVKVDELLIS 121
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + D L +SG++D++VVDSVAAL PK EI + + Q+R+M+QALRK
Sbjct: 122 QPDTGEQALEIADMLVRSGAVDLVVVDSVAALTPKAEIEGEMGDAHVGLQARLMSQALRK 181
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ ++ +S+TL++F+NQ+R K G G E T+GGNALKFY+++R+ + R K
Sbjct: 182 LTANIKRSNTLVVFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRMDIRRIGAIKRG 238
Query: 299 DKV 301
D+V
Sbjct: 239 DEV 241
>gi|206602303|gb|EDZ38784.1| RecA protein [Leptospirillum sp. Group II '5-way CG']
Length = 360
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/236 (49%), Positives = 165/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ +L LALSQ+ FGK S++ L + + PVI +GSL LD+ALGIGG P+GR+VE+
Sbjct: 9 RQKSLDLALSQIEKQFGKGSIMRLGKDQVPQIVPVIPSGSLALDIALGIGGYPRGRVVEL 68
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I E K GG A++D E+ALD + A+ +G+ E+LLIAQPD+ E
Sbjct: 69 YGPESSGKTTLALHAISEVHKAGGVAAFIDAEHALDVTYAKRLGVRTEDLLIAQPDTGEQ 128
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + +TL +SGSID+IVVDSVAAL+P+ E+ + + Q+R+M+QALRK+ ++ +
Sbjct: 129 ALEITETLVRSGSIDLIVVDSVAALVPRAELEGEMGDAHVGLQARLMSQALRKLTSAISK 188
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+T ++F+NQ+R K G G E T+GGNALKFYA++R+ + R K D+V
Sbjct: 189 SNTTVLFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRMDIRRIESIKEGDQV 241
>gi|167623166|ref|YP_001673460.1| recombinase A [Shewanella halifaxensis HAW-EB4]
gi|189039608|sp|B0TK14.1|RECA_SHEHH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|167353188|gb|ABZ75801.1| recA protein [Shewanella halifaxensis HAW-EB4]
Length = 355
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/239 (52%), Positives = 162/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL LSQ+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KEKALNAVLSQIEKQFGKGSIMKL----GEDRSMDVETISTGSLSLDVALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQK G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLEVIAAAQKQGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K ++V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDREEV 238
>gi|132241|sp|P16238.1|RECA_THIFE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|154653|gb|AAA27385.1| recA protein [Acidithiobacillus ferrooxidans]
Length = 346
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/237 (49%), Positives = 160/237 (67%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
Q+ L ALSQ+ FGK +++ L + V STGSL LDLALG+GGLP+GR+VE
Sbjct: 4 QRSKGLSAALSQIDKQFGKGAVMRLGDHNAIKDIEVYSTGSLGLDLALGVGGLPRGRVVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LH I Q GG A++D E+ALDP A +G+D ENLLI+QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHAIASCQAAGGTAAFIDAEHALDPGYAHKLGVDLENLLISQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++D+IV+DSVAAL PK EI + + Q+R+M+QALR + ++
Sbjct: 124 QALEIADMLVRSGAVDLIVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRNLTANIS 183
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K +D+V
Sbjct: 184 RSNTLVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKKSDEV 237
>gi|402825157|ref|ZP_10874470.1| recombinase A [Sphingomonas sp. LH128]
gi|402261292|gb|EJU11342.1| recombinase A [Sphingomonas sp. LH128]
Length = 356
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 120/241 (49%), Positives = 167/241 (69%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M + AL AL+Q+ FGK S + L GS+ ISTGSL LD+ALG+GGLP+G
Sbjct: 17 MDRQKALEAALAQIDKAFGKGSAMKL----GSKETMQVEAISTGSLGLDIALGVGGLPRG 72
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
R++EIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G++ + L+++QP
Sbjct: 73 RVIEIYGPESSGKTTLALHCIAEAQKTGGTAAFIDAEHALDPVYAKKLGVNIDELIVSQP 132
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L +VDTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+Q+LRK+
Sbjct: 133 DTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLT 192
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+
Sbjct: 193 GSISRSRCMVIFINQLRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRTGAIKDRDE 249
Query: 301 V 301
V
Sbjct: 250 V 250
>gi|15598813|ref|NP_252307.1| recombinase A [Pseudomonas aeruginosa PAO1]
gi|107103131|ref|ZP_01367049.1| hypothetical protein PaerPA_01004200 [Pseudomonas aeruginosa PACS2]
gi|116051614|ref|YP_789547.1| recombinase A [Pseudomonas aeruginosa UCBPP-PA14]
gi|152984834|ref|YP_001346907.1| recombinase A [Pseudomonas aeruginosa PA7]
gi|218890158|ref|YP_002439022.1| recombinase A [Pseudomonas aeruginosa LESB58]
gi|313108975|ref|ZP_07794950.1| RecA protein [Pseudomonas aeruginosa 39016]
gi|355640039|ref|ZP_09051529.1| recA [Pseudomonas sp. 2_1_26]
gi|386057435|ref|YP_005973957.1| recombinase A [Pseudomonas aeruginosa M18]
gi|386067652|ref|YP_005982956.1| recombinase A [Pseudomonas aeruginosa NCGM2.S1]
gi|392982659|ref|YP_006481246.1| recombinase A [Pseudomonas aeruginosa DK2]
gi|416854716|ref|ZP_11911073.1| recombinase A [Pseudomonas aeruginosa 138244]
gi|416874852|ref|ZP_11918401.1| recombinase A [Pseudomonas aeruginosa 152504]
gi|418586148|ref|ZP_13150194.1| recombinase A [Pseudomonas aeruginosa MPAO1/P1]
gi|418589424|ref|ZP_13153346.1| recombinase A [Pseudomonas aeruginosa MPAO1/P2]
gi|419754791|ref|ZP_14281149.1| recombinase A [Pseudomonas aeruginosa PADK2_CF510]
gi|420138185|ref|ZP_14646125.1| recombinase A [Pseudomonas aeruginosa CIG1]
gi|421152574|ref|ZP_15612154.1| recombinase A [Pseudomonas aeruginosa ATCC 14886]
gi|421158591|ref|ZP_15617838.1| recombinase A [Pseudomonas aeruginosa ATCC 25324]
gi|421166151|ref|ZP_15624419.1| recombinase A [Pseudomonas aeruginosa ATCC 700888]
gi|421173145|ref|ZP_15630899.1| recombinase A [Pseudomonas aeruginosa CI27]
gi|421179219|ref|ZP_15636815.1| recombinase A [Pseudomonas aeruginosa E2]
gi|421518160|ref|ZP_15964834.1| recombinase A [Pseudomonas aeruginosa PAO579]
gi|424939570|ref|ZP_18355333.1| RecA protein [Pseudomonas aeruginosa NCMG1179]
gi|451987804|ref|ZP_21935956.1| RecA protein [Pseudomonas aeruginosa 18A]
gi|132233|sp|P08280.1|RECA_PSEAE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|122260757|sp|Q02R89.1|RECA_PSEAB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|166220668|sp|A6V1H2.1|RECA_PSEA7 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226737762|sp|B7V8D1.1|RECA_PSEA8 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|9949775|gb|AAG07005.1|AE004782_3 RecA protein [Pseudomonas aeruginosa PAO1]
gi|45384|emb|CAA36504.1| unnamed protein product [Pseudomonas aeruginosa]
gi|45414|emb|CAA29173.1| unnamed protein product [Pseudomonas aeruginosa]
gi|115586835|gb|ABJ12850.1| RecA protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|150959992|gb|ABR82017.1| protein RecA [Pseudomonas aeruginosa PA7]
gi|218770381|emb|CAW26146.1| RecA protein [Pseudomonas aeruginosa LESB58]
gi|310881452|gb|EFQ40046.1| RecA protein [Pseudomonas aeruginosa 39016]
gi|334842594|gb|EGM21198.1| recombinase A [Pseudomonas aeruginosa 152504]
gi|334843699|gb|EGM22284.1| recombinase A [Pseudomonas aeruginosa 138244]
gi|346056016|dbj|GAA15899.1| RecA protein [Pseudomonas aeruginosa NCMG1179]
gi|347303741|gb|AEO73855.1| recombinase A [Pseudomonas aeruginosa M18]
gi|348036211|dbj|BAK91571.1| recombinase A [Pseudomonas aeruginosa NCGM2.S1]
gi|354831559|gb|EHF15571.1| recA [Pseudomonas sp. 2_1_26]
gi|375043822|gb|EHS36438.1| recombinase A [Pseudomonas aeruginosa MPAO1/P1]
gi|375051658|gb|EHS44124.1| recombinase A [Pseudomonas aeruginosa MPAO1/P2]
gi|384398609|gb|EIE45014.1| recombinase A [Pseudomonas aeruginosa PADK2_CF510]
gi|392318164|gb|AFM63544.1| recombinase A [Pseudomonas aeruginosa DK2]
gi|403249038|gb|EJY62554.1| recombinase A [Pseudomonas aeruginosa CIG1]
gi|404347642|gb|EJZ73991.1| recombinase A [Pseudomonas aeruginosa PAO579]
gi|404525334|gb|EKA35610.1| recombinase A [Pseudomonas aeruginosa ATCC 14886]
gi|404536446|gb|EKA46086.1| recombinase A [Pseudomonas aeruginosa CI27]
gi|404539128|gb|EKA48633.1| recombinase A [Pseudomonas aeruginosa ATCC 700888]
gi|404547462|gb|EKA56460.1| recombinase A [Pseudomonas aeruginosa E2]
gi|404549472|gb|EKA58331.1| recombinase A [Pseudomonas aeruginosa ATCC 25324]
gi|451754563|emb|CCQ88479.1| RecA protein [Pseudomonas aeruginosa 18A]
gi|453047376|gb|EME95090.1| recombinase A [Pseudomonas aeruginosa PA21_ST175]
Length = 346
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 163/237 (68%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKQGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|330807842|ref|YP_004352304.1| recombinase A [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|423695630|ref|ZP_17670120.1| RecA protein [Pseudomonas fluorescens Q8r1-96]
gi|327375950|gb|AEA67300.1| recombinase A [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|388009046|gb|EIK70297.1| RecA protein [Pseudomonas fluorescens Q8r1-96]
Length = 350
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPSISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 KNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|49087284|gb|AAT51440.1| PA3617, partial [synthetic construct]
Length = 347
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 163/237 (68%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKQGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|119774183|ref|YP_926923.1| recombinase A [Shewanella amazonensis SB2B]
gi|166220676|sp|A1S4E7.1|RECA_SHEAM RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|119766683|gb|ABL99253.1| recA protein [Shewanella amazonensis SB2B]
Length = 355
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 161/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL L Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KEKALAAVLGQIEKQFGKGSIMKL----GEDRSMDVETISTGSLSLDVALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLEVIAAAQREGKVCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL+PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALVPKAEIEGEIGDSHVGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKEGDEV 238
>gi|302382290|ref|YP_003818113.1| recA protein [Brevundimonas subvibrioides ATCC 15264]
gi|302192918|gb|ADL00490.1| recA protein [Brevundimonas subvibrioides ATCC 15264]
Length = 367
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 167/236 (70%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL A++Q+ FGK S++ L + + P +STGSL LD+ALGIGGLP+GR++E+
Sbjct: 24 KQRALEAAIAQIDRAFGKGSVMKLGKGGIADVIPSVSTGSLGLDMALGIGGLPRGRVIEV 83
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTLALH + E QK GG A++D E+ALDP A+ +G++ ++LL++QPD+ E
Sbjct: 84 FGPESSGKTTLALHTVAEIQKSGGTAAFVDAEHALDPGYAQKLGVNLDDLLVSQPDTGEQ 143
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L +VDTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 144 ALEIVDTLVRSGAVDIVVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 203
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +++F+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 204 SNCIVLFINQIRH--KIGVMYGS-PETTTGGNALKFYASVRLDIRRTGAIKDRDEV 256
>gi|296387879|ref|ZP_06877354.1| recombinase A [Pseudomonas aeruginosa PAb1]
Length = 327
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 163/237 (68%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKQGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|421504009|ref|ZP_15950953.1| recombinase A [Pseudomonas mendocina DLHK]
gi|400345110|gb|EJO93476.1| recombinase A [Pseudomonas mendocina DLHK]
Length = 347
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFY+++RL + RT K ++V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRTGAVKEGEEV 236
>gi|336312352|ref|ZP_08567302.1| RecA protein [Shewanella sp. HN-41]
gi|335864081|gb|EGM69195.1| RecA protein [Shewanella sp. HN-41]
Length = 357
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 162/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL LSQ+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KEKALAAVLSQIEKQFGKGSIMKL----GEDRSMDVETISTGSLSLDVALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDGDEV 238
>gi|217979628|ref|YP_002363775.1| recA protein [Methylocella silvestris BL2]
gi|217505004|gb|ACK52413.1| recA protein [Methylocella silvestris BL2]
Length = 355
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/238 (49%), Positives = 164/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + + TGSL LD+ALG+GGLP+GR+V
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGKNQKVVEIETVPTGSLGLDVALGVGGLPRGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LHVI EAQK GG CA++D E+ALD A +G++ E+LL++QPD+
Sbjct: 74 EIYGPESSGKTTLTLHVIAEAQKKGGVCAFIDAEHALDTIYARKLGVNLEDLLVSQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSQPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 194 SRSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGSIKDHEEV 248
>gi|254461098|ref|ZP_05074514.1| protein RecA [Rhodobacterales bacterium HTCC2083]
gi|206677687|gb|EDZ42174.1| protein RecA [Rhodobacteraceae bacterium HTCC2083]
Length = 351
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 162/236 (68%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL+Q+ FGK S++ L ++ STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 9 KQKALDSALAQIERQFGKGSIMKLGDENAVQQIEATSTGSLGLDIALGIGGLPKGRIVEI 68
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LH + E QK GG CA++D E+ALDP A+ +G+D + LLI+QPD+ E
Sbjct: 69 YGPESSGKTTLTLHTVAEEQKKGGVCAFVDAEHALDPQYAKKLGVDLDELLISQPDTGEQ 128
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L +VDTL +SG++++IVVDSVAAL PK E+ + +R+M+QA+RK+ S+ +
Sbjct: 129 ALEIVDTLVRSGAVNMIVVDSVAALTPKSELEGDMGDSSVGVHARLMSQAMRKLTGSISR 188
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 189 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGALKDRDEV 241
>gi|423097009|ref|ZP_17084805.1| RecA protein [Pseudomonas fluorescens Q2-87]
gi|397884783|gb|EJL01266.1| RecA protein [Pseudomonas fluorescens Q2-87]
Length = 350
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPSISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 KNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|226945899|ref|YP_002800972.1| recombinase A [Azotobacter vinelandii DJ]
gi|259563331|sp|C1DSQ4.1|RECA_AZOVD RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226720826|gb|ACO79997.1| bacterial DNA recombination protein [Azotobacter vinelandii DJ]
Length = 349
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 124/251 (49%), Positives = 168/251 (66%), Gaps = 13/251 (5%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L I EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSTIAEAQKQGATCAFVDAEHALDPDYAAKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDQHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNIL 304
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K +D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAVKESDEV--- 236
Query: 305 EVVNIGSMIRL 315
IGS R+
Sbjct: 237 ----IGSETRV 243
>gi|146308037|ref|YP_001188502.1| recombinase A [Pseudomonas mendocina ymp]
gi|145576238|gb|ABP85770.1| RecA protein [Pseudomonas mendocina ymp]
Length = 347
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFY+++RL + RT K ++V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRTGAVKEGEEV 236
>gi|378949128|ref|YP_005206616.1| recombinase A [Pseudomonas fluorescens F113]
gi|359759142|gb|AEV61221.1| RecA [Pseudomonas fluorescens F113]
Length = 350
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPSISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 KNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|291288669|ref|YP_003505485.1| recA protein [Denitrovibrio acetiphilus DSM 12809]
gi|290885829|gb|ADD69529.1| recA protein [Denitrovibrio acetiphilus DSM 12809]
Length = 342
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/239 (48%), Positives = 168/239 (70%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGRI 122
K AL A+ ++ DFGK +++ L G + + PVI +G L LD+ALG+GG P+GRI
Sbjct: 5 KQKALDAAMGKIEKDFGKGAVMRL----GDKPVEKLPVIPSGILSLDIALGVGGFPRGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG E+SGKTT+ALH I EAQKLGG A++D E+ALDP A+A+G+D +NL+++QPDS
Sbjct: 61 IEIYGAESSGKTTIALHAIAEAQKLGGAAAFVDAEHALDPIYAKAIGVDTDNLIVSQPDS 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + +TL +SG+ID+IVVDSVAAL P+ EI + + Q+R+M+QALRK+
Sbjct: 121 GEVALEITETLVRSGAIDIIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKLTSI 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S T ++F+NQ R +K G G E T+GGNALKFYA++RL + +T+ K ++V
Sbjct: 181 VNKSKTTLVFINQTR--SKIGVVYGN-PETTTGGNALKFYASMRLEIKKTQALKEKEEV 236
>gi|103487210|ref|YP_616771.1| recombinase A [Sphingopyxis alaskensis RB2256]
gi|98977287|gb|ABF53438.1| recA protein [Sphingopyxis alaskensis RB2256]
Length = 360
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/239 (49%), Positives = 167/239 (69%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
+ AL AL+Q+ FGK S++ L GS+ +STGSL LD+ALG+GGLP+GR+
Sbjct: 19 RQKALDAALAQIDRAFGKGSVMKL----GSKEAMQVEAVSTGSLGLDIALGVGGLPRGRV 74
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG E+SGKTTLALH I EAQK+GG A++D E+ALDP A +G+D + L+++QPD+
Sbjct: 75 IEIYGPESSGKTTLALHCIAEAQKIGGTAAFVDAEHALDPVYARKLGVDIDELIVSQPDT 134
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L +VDTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+Q+LRK+ S
Sbjct: 135 GEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGS 194
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D++
Sbjct: 195 ISRSRCMVIFINQLRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRTGQIKNGDEI 250
>gi|114569557|ref|YP_756237.1| recA protein [Maricaulis maris MCS10]
gi|114340019|gb|ABI65299.1| RecA protein [Maricaulis maris MCS10]
Length = 359
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/242 (50%), Positives = 165/242 (68%), Gaps = 4/242 (1%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ K M K+ A+ ALSQ+ FGK S++ L + + ISTGSL LD+ALGIGGLPK
Sbjct: 11 NEKNMDKEKAIEAALSQIDKAFGKGSVMKLGQKP-AMEIETISTGSLGLDIALGIGGLPK 69
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+EIYG E+SGKTTLALH + EAQK GG A++D E+ALDP A +G+D LLI+Q
Sbjct: 70 GRIIEIYGPESSGKTTLALHTVAEAQKAGGVAAFVDAEHALDPVYAGKLGVDLGELLISQ 129
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG+ID++V+DSVAAL P+ E+ + Q+R+M+QALRK+
Sbjct: 130 PDTGEQALEIADTLVRSGAIDILVIDSVAALTPRAELEGEMGDSLPGLQARLMSQALRKL 189
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
S+ +S L+IF+NQ+R K G G E T+GGNALKFY+++RL + R K D
Sbjct: 190 TGSISKSKCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGAIKNRD 246
Query: 300 KV 301
+V
Sbjct: 247 EV 248
>gi|257126448|ref|YP_003164562.1| recombinase A [Leptotrichia buccalis C-1013-b]
gi|257050387|gb|ACV39571.1| recA protein [Leptotrichia buccalis C-1013-b]
Length = 370
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/250 (46%), Positives = 169/250 (67%), Gaps = 5/250 (2%)
Query: 54 DDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSL--KRFFGSRRGPVISTGSLKLDLA 111
+++ DD + +K+ L LAL Q+ D+G+ +++ L + R ISTGSL LD+A
Sbjct: 7 EEKEKDDKGLTEKEKMLDLALKQIQKDYGEGAVMKLGENQKMNIR---AISTGSLNLDIA 63
Query: 112 LGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGID 171
LGIGG+P+GRIVEIYG E+SGKTTLALH+I EAQK GG A++D E+ALDP A+A+G++
Sbjct: 64 LGIGGVPRGRIVEIYGAESSGKTTLALHIIAEAQKAGGVVAFIDAEHALDPVYAKALGVN 123
Query: 172 AENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRI 231
+ LLI+QPD+ E L + D L +SG+IDVIVVDSVAAL+PK EI + Q+R+
Sbjct: 124 IDELLISQPDTGEQALEISDMLVRSGAIDVIVVDSVAALVPKAEIEGEMGDQQMGLQARL 183
Query: 232 MTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
M++ALRK+ ++ +S T++IF+NQ+R + + TSGG ALKF++ +R+ + R
Sbjct: 184 MSKALRKLTGNIAKSDTVMIFINQIREKIGGFSFVPGVQTTTSGGRALKFFSTVRMEVKR 243
Query: 292 TRLFKIADKV 301
K D V
Sbjct: 244 VGSVKQGDDV 253
>gi|452877934|ref|ZP_21955179.1| recombinase A [Pseudomonas aeruginosa VRFPA01]
gi|452185371|gb|EME12389.1| recombinase A [Pseudomonas aeruginosa VRFPA01]
Length = 332
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 163/237 (68%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKQGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|383784750|ref|YP_005469320.1| recombinase A [Leptospirillum ferrooxidans C2-3]
gi|383083663|dbj|BAM07190.1| RecA protein [Leptospirillum ferrooxidans C2-3]
Length = 357
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/242 (49%), Positives = 163/242 (67%), Gaps = 3/242 (1%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ K + + +L LALSQ+ FGK S++ L + P I TGSL LDLALGIGG P+
Sbjct: 3 EEKEVNRQRSLELALSQIEKQFGKGSIMRLGKDQPVVVVPAIPTGSLSLDLALGIGGYPR 62
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GR+VEI+G E+SGKTTL L I E K GG A++D E+ALD S A +G+ E+LLI+Q
Sbjct: 63 GRVVEIFGPESSGKTTLTLQAIAEVHKRGGIAAFIDAEHALDISYARKLGVKTEDLLISQ 122
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + +TL +SGSID++VVDSVAAL+PK E+ + + Q+R+M+QALRK+
Sbjct: 123 PDTGEQALEIAETLVRSGSIDLVVVDSVAALVPKAELEGEMGDSHMGLQARLMSQALRKL 182
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
S+ +S+T +IF+NQ+R K G G E T+GGNALKFYA++RL + R K D
Sbjct: 183 TSSISKSNTTVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIEAIKDGD 239
Query: 300 KV 301
+V
Sbjct: 240 QV 241
>gi|46447629|ref|YP_008994.1| recombinase A [Candidatus Protochlamydia amoebophila UWE25]
gi|46401270|emb|CAF24719.1| probable recombination protein recA [Candidatus Protochlamydia
amoebophila UWE25]
Length = 361
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/245 (47%), Positives = 168/245 (68%), Gaps = 3/245 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
++ AL LA+SQ+ FG+ +++S + + VI TG+L LD+ALGIGG+P+GR+VE
Sbjct: 10 ERKKALGLAVSQIKKQFGEGAIMSFGKHSSEKEMSVIKTGALALDIALGIGGVPRGRVVE 69
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGK+TLALH++ AQK GG AY+D E+ALDPS A +GI+ ++L+I+QPDS E
Sbjct: 70 IYGPESSGKSTLALHIVANAQKNGGLAAYIDAEHALDPSYAGKIGINIDDLMISQPDSGE 129
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L++ + L +S ++DVIV+DSVAAL+PK E+ I + Q+R+M+QALRK+ SL
Sbjct: 130 EALNIAEMLARSNAVDVIVIDSVAALVPKSELEGEIGDQFMGLQARMMSQALRKLTASLS 189
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNIL 304
+S+T IF+NQ+R K G G E T+GG ALKFY+++RL + RT K D I
Sbjct: 190 KSNTCAIFINQIR--DKIGIVYGN-PETTTGGRALKFYSSVRLDIRRTGGIKGPDNTEIG 246
Query: 305 EVVNI 309
V +
Sbjct: 247 NRVKV 251
>gi|126735783|ref|ZP_01751528.1| recA protein [Roseobacter sp. CCS2]
gi|126714970|gb|EBA11836.1| recA protein [Roseobacter sp. CCS2]
Length = 360
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 120/245 (48%), Positives = 166/245 (67%), Gaps = 9/245 (3%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI---STGSLKLDLALGIGG 116
D K K+ AL AL+Q+ FGK S++ L G + P I STGSL LD+ALGIGG
Sbjct: 11 DKKTADKEKALESALAQIERQFGKGSIMKLG---GENKMPEIEATSTGSLGLDIALGIGG 67
Query: 117 LPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLL 176
LPKGR++EIYG E+SGKTTL LH I E QK GG CA++D E+ALDP A+ +G++ + LL
Sbjct: 68 LPKGRVIEIYGPESSGKTTLTLHAIAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELL 127
Query: 177 IAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQAL 236
I+QPD+ E L +VDTL +SG++++++VDSVAAL PK E+ + +R+M+QA+
Sbjct: 128 ISQPDTGEQALEIVDTLVRSGAVNMVIVDSVAALTPKSELEGDMGDSSVGVHARLMSQAM 187
Query: 237 RKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
RK+ S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 188 RKLTGSINRSGCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIK 244
Query: 297 IADKV 301
D+V
Sbjct: 245 DRDEV 249
>gi|145590013|ref|YP_001156610.1| recA protein [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145048419|gb|ABP35046.1| RecA protein [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 363
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 162/236 (68%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL+Q+ FGK S++ L S+ V+S+GSL LD+ALG+GGL +GR++EI
Sbjct: 21 KQKALTAALAQIEKQFGKGSIMRLGDAEISQDIQVVSSGSLGLDIALGVGGLARGRVIEI 80
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LH I E QKLGG CA++D E+ALD A +G+D NLLI+QPD+ E
Sbjct: 81 YGPESSGKTTLTLHAIAEMQKLGGTCAFIDAEHALDVQYASRLGVDVNNLLISQPDTGEQ 140
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SGSID+IV+DSVAAL+P+ EI + Q+R+M+QALRK+ ++ +
Sbjct: 141 ALEIADALVRSGSIDLIVIDSVAALVPRAEIEGDMGDSLPGLQARLMSQALRKLTGAIKR 200
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++T +IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 201 TNTTVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASMRLDIRRIGSIKKGDEV 253
>gi|389876987|ref|YP_006370552.1| recombinase A [Tistrella mobilis KA081020-065]
gi|388527771|gb|AFK52968.1| RecA protein [Tistrella mobilis KA081020-065]
Length = 366
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/255 (48%), Positives = 169/255 (66%), Gaps = 17/255 (6%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M K AL AL Q+ FGK S++ L G + V+ TGSL LD+ALG+GG P+G
Sbjct: 19 MDKQKALEAALGQIERAFGKGSVMKL----GQQEKVDVDVVPTGSLALDIALGVGGFPRG 74
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
R++EIYG E+SGKTTLALH I EAQ+ GG CA++D E+ALDPS A +G++ + L+I+QP
Sbjct: 75 RVIEIYGPESSGKTTLALHAIAEAQRGGGTCAFVDAEHALDPSYARKLGVNIDELVISQP 134
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+VVDSVAAL PK E+ + + Q+R+M+QALRK+
Sbjct: 135 DTGEQALEIADTLVRSGAIDVLVVDSVAALTPKAELEGEMGDSHVGLQARLMSQALRKLT 194
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+
Sbjct: 195 GSISRSRCVVIFINQIRM--KIGVMYGS-PETTAGGNALKFYASVRLDIRRIGAVKERDE 251
Query: 301 VNILEVVNIGSMIRL 315
V +GS R+
Sbjct: 252 V-------VGSQTRV 259
>gi|386817726|ref|ZP_10104944.1| Protein recA [Thiothrix nivea DSM 5205]
gi|386422302|gb|EIJ36137.1| Protein recA [Thiothrix nivea DSM 5205]
Length = 347
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 163/237 (68%), Gaps = 3/237 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL Q+ FGK +++ + R VISTGSL LD+ALGIGGLPKGR+VEI
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDTNAIRDVDVISTGSLTLDIALGIGGLPKGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QK GG A++D E+ALDP A+ +G++ ++LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAECQKQGGTAAFVDAEHALDPIYAQKLGVNVDDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIADMLVRSGAVDIVVIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTGNIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
S+TL+IF+NQ+R K G G E T+GGNALKFY+++RL + R K D++
Sbjct: 185 SNTLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRIGAIKKGDEIT 238
>gi|171464132|ref|YP_001798245.1| recA protein [Polynucleobacter necessarius subsp. necessarius
STIR1]
gi|171193670|gb|ACB44631.1| recA protein [Polynucleobacter necessarius subsp. necessarius
STIR1]
Length = 362
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 161/236 (68%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL+Q+ FGK S++ L S V+S+GSL LD+ALG+GGL +GR++EI
Sbjct: 21 KQKALTAALAQIEKQFGKGSIMRLGDAEISEDIQVVSSGSLGLDIALGVGGLARGRVIEI 80
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LH I E QKLGG CA++D E+ALD A +G+D NLLI+QPD+ E
Sbjct: 81 YGPESSGKTTLTLHAIAEMQKLGGTCAFIDAEHALDVQYAGKLGVDVNNLLISQPDTGEQ 140
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SGSID+IV+DSVAAL+PK EI + Q+R+M+QALRK+ ++ +
Sbjct: 141 ALEIADALVRSGSIDLIVIDSVAALVPKAEIEGDMGDSLPGLQARLMSQALRKLTGAIKR 200
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++T +IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 201 TNTTVIFINQIRM--KIGVIFGS-PETTTGGNALKFYASMRLDIRRIGSIKKGDEV 253
>gi|431805797|ref|YP_007232698.1| recombinase A [Liberibacter crescens BT-1]
gi|430799772|gb|AGA64443.1| RecA protein [Liberibacter crescens BT-1]
Length = 345
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/232 (52%), Positives = 161/232 (69%), Gaps = 11/232 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPK 119
M K AL ALSQ+ FGK S++ L GS+ V ISTGSL LD+ALGIGGLPK
Sbjct: 1 MDKGKALEAALSQIERSFGKGSIMRL----GSKENVVEIETISTGSLGLDIALGIGGLPK 56
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI EIYG E+SGKTTLALH I +AQK G CA++D E+A D A+ +G+D +NLL++Q
Sbjct: 57 GRITEIYGPESSGKTTLALHTIAQAQKKSGICAFVDAEHAFDSLYAKKLGVDLQNLLVSQ 116
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 117 PDTGEQALEITDTLIRSGAVDVLVVDSVAALTPRAEIEGEMGDNLPGMQARLMSQALRKL 176
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
S+ +S+ ++IF+NQ+R K G G E T+GGNALKFY+++RL + R
Sbjct: 177 TASISRSNCILIFINQMRM--KIGVMFGS-PETTTGGNALKFYSSIRLDIRR 225
>gi|114330801|ref|YP_747023.1| recombinase A [Nitrosomonas eutropha C91]
gi|122314264|sp|Q0AHX4.1|RECA_NITEC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|114307815|gb|ABI59058.1| RecA protein [Nitrosomonas eutropha C91]
Length = 343
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 168/240 (70%), Gaps = 11/240 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL AL+Q+ +GK S++ L ++ V+STGSL LD+ALG+GGLP+GRI+EI
Sbjct: 5 KNKALTAALAQIEKQYGKGSIMRLGDSDVAKDIQVVSTGSLSLDIALGVGGLPRGRIIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QKLGG A++D E+ALDP A+ +G++ + LLI+QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDPQYAQKIGVNVQELLISQPDNGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEI----GVPINGMYSDAQSRIMTQALRKIHY 241
L + D L +SGS+D++V+DSVAAL P+ EI G P G+ Q+R+M+QALRK+
Sbjct: 125 ALEITDMLVRSGSVDIVVIDSVAALTPRAEIEGEMGEPQMGL----QARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ +++T +IF+NQ+R K G G E T+GGNALKFYA++RL + RT K +++
Sbjct: 181 NIKRTNTTVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGSIKRGEEI 237
>gi|222064100|emb|CAR78905.1| recombinase A [Pseudochrobactrum sp. KSS 7.8]
Length = 247
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 113/201 (56%), Positives = 148/201 (73%), Gaps = 3/201 (1%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLPKGRIVEIYG E+SGKTT+ALH I EAQK GG CA++D E+AL
Sbjct: 3 VPTGSLSLDIALGVGGLPKGRIVEIYGPESSGKTTMALHTIAEAQKKGGICAFVDAEHAL 62
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 63 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 122
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALK 280
Q+R+M+QALRK+ S+ +S+T++IF+NQ+R K G G E T+GGNALK
Sbjct: 123 GDSLPGLQARLMSQALRKLTASISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALK 179
Query: 281 FYAALRLRMMRTRLFKIADKV 301
FYA++RL + R K D++
Sbjct: 180 FYASVRLDIRRIGSIKERDEI 200
>gi|299769713|ref|YP_003731739.1| recombinase A [Acinetobacter oleivorans DR1]
gi|298699801|gb|ADI90366.1| recombinase A [Acinetobacter oleivorans DR1]
Length = 348
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 161/236 (68%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKTGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|322379036|ref|ZP_08053439.1| recombinase A [Helicobacter suis HS1]
gi|321148528|gb|EFX43025.1| recombinase A [Helicobacter suis HS1]
Length = 341
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 163/235 (69%), Gaps = 9/235 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKGR 121
QK AL LA+ Q+ FGK +++ L G + V STGSL LD+ALGIGG+PKGR
Sbjct: 4 QKQKALELAIKQIDKQFGKGALMRL----GDKEVEHIEVTSTGSLGLDMALGIGGVPKGR 59
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVE+YG E+SGKTTL LH+I +AQ+ GG CA++D E+ALD A+ +G+D +NLLI+QPD
Sbjct: 60 IVEVYGPESSGKTTLTLHIIAQAQREGGTCAFIDAEHALDVQYAKKLGVDTDNLLISQPD 119
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L +++TL +SG++DVIVVDSVAAL P+ EI + + Q+R+M+QALRKI
Sbjct: 120 TGEEALEILETLARSGAVDVIVVDSVAALTPRAEIEGDMGDQHVGLQARLMSQALRKITG 179
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
L + +T +IF+NQ+R + G G E T+GGNALKFYA++R+ + R K
Sbjct: 180 ILHKMNTTLIFINQIRMKIGT-MGYGS-PETTTGGNALKFYASVRIDIRRIATLK 232
>gi|340756969|ref|ZP_08693573.1| RecA protein [Fusobacterium varium ATCC 27725]
gi|251834235|gb|EES62798.1| RecA protein [Fusobacterium varium ATCC 27725]
Length = 373
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 164/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K+ AL LA+ Q++ +FG+ S++ L S VISTGSL L++ALG+GG+P+GRI+
Sbjct: 9 MSKEKALDLAIKQISKEFGEGSIMKLGNNL-SMNVEVISTGSLNLNIALGVGGVPRGRII 67
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTT+ALH++ EAQK GG A++D E+ALDP A A+G+D + LLI+QPD
Sbjct: 68 EVYGAESSGKTTIALHIVAEAQKAGGIAAFIDAEHALDPVYARALGVDVDELLISQPDYG 127
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++D+IVVDSVAAL+PK EI + Q+R+M++ALRK+ +L
Sbjct: 128 EQALEIADMLVRSNAVDIIVVDSVAALVPKVEIDGEMGDQQMGLQARLMSKALRKLTATL 187
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S T ++F+NQ+R G G G T+GG ALKFY+++RL + R K D+V
Sbjct: 188 NKSKTTMVFINQIR-DKIGGFGFGPQT-TTTGGKALKFYSSVRLEVKRIGSVKQGDEV 243
>gi|304310615|ref|YP_003810213.1| recombinase A [gamma proteobacterium HdN1]
gi|301796348|emb|CBL44556.1| RecA/RadA recombinase [gamma proteobacterium HdN1]
Length = 343
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 120/237 (50%), Positives = 164/237 (69%), Gaps = 4/237 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL+Q+ FGK S++ + + P ISTGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KRKALGAALAQIERQFGKGSIMRMGDQL-QQAIPAISTGSLGLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 64 YGPESSGKTTLTLSVIAQAQKQGAVCAFVDAEHALDPIYANKLGVNVDDLLVSQPDTGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +S ++DVIVVDSVAAL+P+ EI + + Q+R+M+QALRKI ++ Q
Sbjct: 124 ALEITDMLVRSNAVDVIVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGNVKQ 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K ++V
Sbjct: 184 ANCLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGSVKQGEEVT 237
>gi|269836955|ref|YP_003319183.1| recA protein [Sphaerobacter thermophilus DSM 20745]
gi|269786218|gb|ACZ38361.1| recA protein [Sphaerobacter thermophilus DSM 20745]
Length = 352
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 114/232 (49%), Positives = 161/232 (69%), Gaps = 3/232 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
++D A+ LA++Q+ FGK S++ + + I TGS+ LDLALG+GG+P+GRI E
Sbjct: 3 ERDRAIELAMAQIERQFGKGSIMRMGEAESRLQIEAIPTGSIALDLALGVGGIPRGRITE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTLA H+I EAQKLGG AY+D E+A DP AE GI ++LLI+QPD+ E
Sbjct: 63 IYGPESSGKTTLAQHIIAEAQKLGGVAAYIDAEHAFDPVYAERCGIKLDDLLISQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + +TL +SG++DVIV+DSVAAL+P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 123 QALEICETLVRSGALDVIVIDSVAALVPRAEIDGDMGDAHVGLQARLMSQALRKLTGAIS 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+S T +IF+NQ+R K G G E T+GGNALKFY+++RL + R K
Sbjct: 183 RSRTAVIFINQLRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRIETIK 231
>gi|429757402|ref|ZP_19289938.1| RecA protein [Actinomyces sp. oral taxon 181 str. F0379]
gi|429175072|gb|EKY16525.1| RecA protein [Actinomyces sp. oral taxon 181 str. F0379]
Length = 363
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 120/235 (51%), Positives = 160/235 (68%), Gaps = 8/235 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL LALSQ+ FGK S++ R R PV I TGSL LD+ALGIGGLP+GR++
Sbjct: 16 RNKALELALSQIDKQFGKGSVM---RLGDDSRPPVQVIPTGSLALDVALGIGGLPRGRVI 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A A+G+D +NLL++QPD+
Sbjct: 73 EIYGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPVYARALGVDTDNLLVSQPDTG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 133 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 192
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ T IF+NQ+R K G G E T+GG ALKFYA++R+ + R K A
Sbjct: 193 SATGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYASVRIDVRRIETLKEA 244
>gi|148887239|emb|CAM12786.1| recombinase A [Ochrobactrum sp. PR 17]
Length = 268
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 114/201 (56%), Positives = 148/201 (73%), Gaps = 3/201 (1%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+STGSL LD+ALG+GGLPKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+AL
Sbjct: 7 VSTGSLSLDIALGVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHAL 66
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+V+DSVAAL P+ EI +
Sbjct: 67 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEM 126
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALK 280
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+R K G G E T+GGNALK
Sbjct: 127 GDSLPGLQARLMSQALRKLTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALK 183
Query: 281 FYAALRLRMMRTRLFKIADKV 301
FYA++RL + R K D+V
Sbjct: 184 FYASVRLDIRRIGSIKERDEV 204
>gi|395493566|ref|ZP_10425145.1| recombinase A [Sphingomonas sp. PAMC 26617]
gi|404253892|ref|ZP_10957860.1| recombinase A [Sphingomonas sp. PAMC 26621]
Length = 359
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/243 (49%), Positives = 172/243 (70%), Gaps = 12/243 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
++ AL AL+Q+ FGK S + L GS++ VISTGSL LD+ALG+GGLP+GR
Sbjct: 15 ERAKALEAALAQIDRAFGKGSAMKL----GSKQTMQVEVISTGSLGLDIALGVGGLPRGR 70
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
++EIYG E+SGKTTLALHVI EAQK GG A++D E+ALDP A+ +G++ + L+++QPD
Sbjct: 71 VIEIYGPESSGKTTLALHVIAEAQKGGGTAAFVDAEHALDPVYAKKLGVNIDELIVSQPD 130
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L +VDTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+Q+LRK+
Sbjct: 131 TGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTG 190
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT +I D+
Sbjct: 191 SISRSRCMVIFINQLRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRT--GQIKDRE 245
Query: 302 NIL 304
I+
Sbjct: 246 EII 248
>gi|11387036|sp|Q9R9U2.1|RECA_PSEOL RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|5824159|emb|CAB54066.1| RecA gene protein [Pseudomonas putida]
Length = 348
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 165/239 (69%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ L GS R VISTGSL LD+ALG+GGLP+GRI
Sbjct: 5 KSKALEAALSQIEKQFGKGSIMRL----GSDRTMDIDVISTGSLGLDIALGVGGLPRGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI EAQ+ G CA++D E+ALDP A +G++ + LL +QPD+
Sbjct: 61 VEIYGPESSGKTTLTLSVIAEAQRQGLTCAFVDAEHALDPIYAAKLGVNIDELLCSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L +VD LT+SG++++IVVDSVAAL+PK EI I + +R+M+QA+RKI +
Sbjct: 121 GEQALEIVDILTRSGAVNLIVVDSVAALVPKAEIEGEIGDSHVGLAARMMSQAMRKITGN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L S+T+ IF+NQ+R K G G E T+GGNALKFYA++RL + RT K ++V
Sbjct: 181 LKNSNTMCIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAVKEGEEV 236
>gi|296132793|ref|YP_003640040.1| recA protein [Thermincola potens JR]
gi|296031371|gb|ADG82139.1| recA protein [Thermincola potens JR]
Length = 343
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 115/231 (49%), Positives = 159/231 (68%), Gaps = 3/231 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL +ALSQ+ FGK S++ L VI TG+L LD+ALG+GG+P+GR+VEI
Sbjct: 4 KLKALDMALSQIEKQFGKGSIMKLGEASAKMNIEVIPTGALALDVALGVGGVPRGRVVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+I EAQKLGG A++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTVALHIIAEAQKLGGTAAFIDAEHALDPYYARKLGVDIDNLLVSQPDTGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG+IDVIVVDSVAAL+P+ EI + + Q+R+M+QALRK+ ++ +
Sbjct: 124 ALEIAEALVRSGAIDVIVVDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAISK 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
S T IF+NQ+R K G G E T GG ALKFYA++R+ + + K
Sbjct: 184 SRTTAIFINQIR--EKVGVMFGN-PETTPGGRALKFYASVRMEVRKIESLK 231
>gi|373457380|ref|ZP_09549147.1| Protein recA [Caldithrix abyssi DSM 13497]
gi|371719044|gb|EHO40815.1| Protein recA [Caldithrix abyssi DSM 13497]
Length = 348
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 169/243 (69%), Gaps = 16/243 (6%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
+K A+ +A+SQ+ +FGK +++ L G R VI TGS+ LD ALGIGG+P+GR
Sbjct: 6 EKAKAIEIAVSQIERNFGKGAIMRL----GDRVKIDVDVIPTGSVSLDAALGIGGVPRGR 61
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I EIYG E+SGKTTLALH+I EAQK GG A++D E+ALDP A+ +G+D NLL++QPD
Sbjct: 62 ITEIYGPESSGKTTLALHIIAEAQKRGGLAAFVDAEHALDPGYAKKLGVDTINLLVSQPD 121
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L +V+TL +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 122 NGEQALEIVETLVRSGALDVIVIDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLTG 181
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRM---DEVTSGGNALKFYAALRLRMMRTRLFKIA 298
++ +S+T +IF+NQ+R + LG M E T+GG ALKFY ++RL + R K+
Sbjct: 182 TVSKSNTCVIFINQIR------EKLGVMFGNPETTTGGRALKFYTSIRLDIRRIATIKVG 235
Query: 299 DKV 301
+++
Sbjct: 236 NEM 238
>gi|293609243|ref|ZP_06691545.1| recA protein [Acinetobacter sp. SH024]
gi|375135062|ref|YP_004995712.1| recombinase A [Acinetobacter calcoaceticus PHEA-2]
gi|427423493|ref|ZP_18913645.1| RecA protein [Acinetobacter baumannii WC-136]
gi|292827695|gb|EFF86058.1| recA protein [Acinetobacter sp. SH024]
gi|325122507|gb|ADY82030.1| recombinase A [Acinetobacter calcoaceticus PHEA-2]
gi|425699726|gb|EKU69331.1| RecA protein [Acinetobacter baumannii WC-136]
Length = 348
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 123/250 (49%), Positives = 166/250 (66%), Gaps = 11/250 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNILE 305
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI---- 236
Query: 306 VVNIGSMIRL 315
IGS R+
Sbjct: 237 ---IGSETRV 243
>gi|192362324|ref|YP_001982693.1| recombinase A [Cellvibrio japonicus Ueda107]
gi|190688489|gb|ACE86167.1| recA protein [Cellvibrio japonicus Ueda107]
Length = 353
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 124/253 (49%), Positives = 169/253 (66%), Gaps = 17/253 (6%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL+ AL Q+ FGK +++ + G R P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 10 KEKALQAALGQIERQFGKGTVMRM----GDREQMVIPAISTGSLGLDVALGIGGLPKGRI 65
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG E+SGKTTL L VI EAQ+ GG CA++D E+ALDP A +G++ +L+++QPD+
Sbjct: 66 IEIYGPESSGKTTLTLQVIAEAQRQGGTCAFIDAEHALDPIYATKLGVNVGDLIVSQPDT 125
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L V D L +SG+IDV+VVDSVAAL P+ EI + + Q+R+M+QALRKI +
Sbjct: 126 GEQALEVTDMLVRSGAIDVLVVDSVAALTPRAEIEGEMGDHHVGLQARLMSQALRKITGN 185
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+ ++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 186 IKNANCLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRVGAVKEGEEV- 241
Query: 303 ILEVVNIGSMIRL 315
IGS R+
Sbjct: 242 ------IGSETRV 248
>gi|424742868|ref|ZP_18171188.1| RecA protein [Acinetobacter baumannii WC-141]
gi|422943831|gb|EKU38842.1| RecA protein [Acinetobacter baumannii WC-141]
Length = 348
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 161/236 (68%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKTGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDMIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|402819550|ref|ZP_10869118.1| hypothetical protein IMCC14465_03520 [alpha proteobacterium
IMCC14465]
gi|402511697|gb|EJW21958.1| hypothetical protein IMCC14465_03520 [alpha proteobacterium
IMCC14465]
Length = 363
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 161/236 (68%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
++ AL AL Q+ ++GK S++ L I TGSL LD+ALGIGGLP+GRI+EI
Sbjct: 15 RNKALEAALGQIERNYGKGSVMKLGDPKNIVEIGSIPTGSLGLDIALGIGGLPQGRIIEI 74
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G D E LLI+QPD+ E
Sbjct: 75 YGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPLYASKLGADVEELLISQPDNGEQ 134
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+V+DSVAAL P+ E+ + Q+R+M+QALRK+ S+ +
Sbjct: 135 ALEIADTLVRSGAIDVLVIDSVAALTPRAELEGDMGDSLPGLQARLMSQALRKLTASISK 194
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+T++IF+NQ+R K G G E T+GGNALKFYA+ RL + R K ++V
Sbjct: 195 SNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASCRLDIRRIGAIKDREEV 247
>gi|420153910|ref|ZP_14660842.1| RecA protein [Actinomyces massiliensis F0489]
gi|394756320|gb|EJF39421.1| RecA protein [Actinomyces massiliensis F0489]
Length = 400
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 121/242 (50%), Positives = 162/242 (66%), Gaps = 8/242 (3%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLP 118
AK + AL AL+Q+ FGK S++ R R PV I TGS LD+ALGIGGLP
Sbjct: 4 AKTQDRSKALATALAQIDKSFGKGSVM---RLGDETRPPVAVIPTGSTALDVALGIGGLP 60
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRIVEIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A+A+G+D +NLL++
Sbjct: 61 RGRIVEIYGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPVYAKALGVDTDNLLVS 120
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + D L +SG +D+IVVDSVAAL+PK EI + + Q+R+M+QALRK
Sbjct: 121 QPDTGEQALEITDMLIRSGGLDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRK 180
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
I +L + T IF+NQ+R K G G E T+GG ALKFYA++R+ + R + K
Sbjct: 181 ITGALSATGTTAIFINQLR--EKIGVFFGNP-ETTTGGKALKFYASVRIDVRRAQTLKDG 237
Query: 299 DK 300
D+
Sbjct: 238 DQ 239
>gi|262279350|ref|ZP_06057135.1| DNA strand exchange and recombination protein RecA [Acinetobacter
calcoaceticus RUH2202]
gi|262259701|gb|EEY78434.1| DNA strand exchange and recombination protein RecA [Acinetobacter
calcoaceticus RUH2202]
Length = 348
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 161/236 (68%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDMIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|188591287|ref|YP_001795887.1| recombinase a [Cupriavidus taiwanensis LMG 19424]
gi|238692937|sp|B2AHB8.1|RECA_CUPTR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|170938181|emb|CAP63167.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Cupriavidus taiwanensis LMG 19424]
Length = 354
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 120/249 (48%), Positives = 166/249 (66%), Gaps = 3/249 (1%)
Query: 53 FDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLAL 112
DD+ +K AL ALSQ+ FGK S++ L + V+STGSL LD+AL
Sbjct: 1 MDDKKAGAGVSAEKQKALAAALSQIEKQFGKGSIMRLGDGEVEKDIQVVSTGSLGLDIAL 60
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
G+GGLP+GR+VEIYG E+SGKTTL L V+ E QKLGG CA++D E+ALD + A +G++
Sbjct: 61 GVGGLPRGRVVEIYGPESSGKTTLTLQVVAEMQKLGGTCAFIDAEHALDVNYASKLGVNV 120
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
+LLI+QPD+ E L + D L +SGSID+I++DSVAAL+PK EI + Q+R+M
Sbjct: 121 GDLLISQPDTGEQALEITDALVRSGSIDLIIIDSVAALVPKAEIEGEMGDSLPGLQARLM 180
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRT 292
+QALRK+ ++ +++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 181 SQALRKLTGTIKRTNCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRI 237
Query: 293 RLFKIADKV 301
K D V
Sbjct: 238 GSIKKGDDV 246
>gi|301335042|emb|CBW30484.1| recombinase A [Ochrobactrum pecoris]
gi|301335044|emb|CBW30485.1| recombinase A [Ochrobactrum pecoris]
Length = 247
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/201 (56%), Positives = 148/201 (73%), Gaps = 3/201 (1%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+STGSL LD+ALG+GGLPKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+AL
Sbjct: 3 VSTGSLSLDIALGVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHAL 62
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+V+DSVAAL P+ EI +
Sbjct: 63 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEM 122
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALK 280
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+R K G G E T+GGNALK
Sbjct: 123 GDSLPGLQARLMSQALRKLTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALK 179
Query: 281 FYAALRLRMMRTRLFKIADKV 301
FYA++RL + R K D+V
Sbjct: 180 FYASVRLDIRRIGSIKERDEV 200
>gi|296282672|ref|ZP_06860670.1| recombinase A [Citromicrobium bathyomarinum JL354]
Length = 354
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 124/259 (47%), Positives = 176/259 (67%), Gaps = 14/259 (5%)
Query: 46 SAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVIS 102
+AA++ DD+ + + + AL AL+Q+ FGK S + L GS+ IS
Sbjct: 2 AAAKLKLVDDKETN----VDRQKALDAALAQIDRAFGKGSAMKL----GSKETMNVESIS 53
Query: 103 TGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDP 162
TGSL LD+ALGIGGLPKGR++E+YG E+SGKTTLALHVI EAQK GG A++D E+ALDP
Sbjct: 54 TGSLGLDIALGIGGLPKGRVIEVYGPESSGKTTLALHVIAEAQKAGGTAAFVDAEHALDP 113
Query: 163 SLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPING 222
A+ +G+D + L+++QPD+ E L + DTL +S +IDV+VVDSVAAL+P+ EI +
Sbjct: 114 VYAKKLGVDIDELIVSQPDTGEQALEITDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGD 173
Query: 223 MYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFY 282
+ Q+R+M+Q+LRK+ S+ +S ++IF+NQ+R K G G E T+GGNALKFY
Sbjct: 174 SHVGLQARLMSQSLRKLTGSINRSKCMVIFINQLRM--KIGVMYGN-PETTTGGNALKFY 230
Query: 283 AALRLRMMRTRLFKIADKV 301
A++RL + RT K D++
Sbjct: 231 ASVRLDIRRTGQIKDRDEI 249
>gi|188586099|ref|YP_001917644.1| recombinase A [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350786|gb|ACB85056.1| RecA protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 364
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 162/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M+K AL +ALSQ+ FGK S++ L VI TG+L LD+ALGIGGLP+GR+V
Sbjct: 1 MEKQKALDMALSQIEKQFGKGSIMKLGESNAKMNVEVIPTGALSLDIALGIGGLPRGRVV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTT+ALH + EAQK GG A++D E+ALDP+ A +G++ + LL++QPD+
Sbjct: 61 EVYGPESSGKTTVALHAVAEAQKNGGNAAFIDAEHALDPAYARNLGVNIDELLVSQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + ++L +SG+IDVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEIAESLVRSGAIDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGSI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S T +F+NQ+R K G G E T GG ALKFY+++R+ + R K + +
Sbjct: 181 RKSRTTAVFINQIR--EKVGVMFGN-PETTPGGRALKFYSSVRIEVRRIESLKKGNDI 235
>gi|226953077|ref|ZP_03823541.1| recombinase A [Acinetobacter sp. ATCC 27244]
gi|226836169|gb|EEH68552.1| recombinase A [Acinetobacter sp. ATCC 27244]
Length = 347
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 161/236 (68%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKTGGTCAFIDAEHALDPEYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEGDEI 236
>gi|23465975|ref|NP_696578.1| recombinase A [Bifidobacterium longum NCC2705]
gi|239621261|ref|ZP_04664292.1| protein recA [Bifidobacterium longum subsp. infantis CCUG 52486]
gi|30316236|sp|Q8G4G9.1|RECA_BIFLO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|23326690|gb|AAN25214.1| RecA protein [Bifidobacterium longum NCC2705]
gi|239515722|gb|EEQ55589.1| protein recA [Bifidobacterium longum subsp. infantis CCUG 52486]
Length = 397
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 125/256 (48%), Positives = 170/256 (66%), Gaps = 7/256 (2%)
Query: 45 SSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTG 104
+ A+ P +D+ D K + AL AL+Q+ FGK S + L + VI TG
Sbjct: 5 TKPAKDPAAEDKHELDPK---RKAALDTALAQVEKSFGKGSAMRLGDQP-EQNVEVIPTG 60
Query: 105 SLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSL 164
SL LD+ALGIGGLPKGRIVEIYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+
Sbjct: 61 SLALDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAY 120
Query: 165 AEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMY 224
A +G+D ++L+++QPD+ E L + D L +SG++DVIV+DSVAAL+PK EI + +
Sbjct: 121 ARKLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSH 180
Query: 225 SDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAA 284
Q+R+M+QALRK+ +L Q+ T IF+NQ+R K G G E T+GG ALKFYA+
Sbjct: 181 VGLQARLMSQALRKMTGALAQAGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYAS 237
Query: 285 LRLRMMRTRLFKIADK 300
+RL + R + K D+
Sbjct: 238 VRLDIRRIQTLKNGDE 253
>gi|294650666|ref|ZP_06728020.1| recombination protein A [Acinetobacter haemolyticus ATCC 19194]
gi|292823457|gb|EFF82306.1| recombination protein A [Acinetobacter haemolyticus ATCC 19194]
Length = 347
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 161/236 (68%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKTGGTCAFIDAEHALDPEYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEGDEI 236
>gi|392542198|ref|ZP_10289335.1| recombinase A [Pseudoalteromonas piscicida JCM 20779]
Length = 351
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 162/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ L G + ISTGSL LD+ALGIGGLP GRI
Sbjct: 5 KQKALDAALSQIERQFGKGSIMKL----GENKALDIEAISTGSLGLDIALGIGGLPTGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L I EAQKLG CA++D E+ALDP AE +G++ + LL++QPD+
Sbjct: 61 VEIYGPESSGKTTLTLQAIAEAQKLGKTCAFVDAEHALDPIYAEKLGVNVDELLVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++D+IV+DSVAAL PK EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEICDMLVRSGAVDLIVIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTAN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S+TL IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 181 IKRSNTLCIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGSVKEGDEV 236
>gi|406967497|gb|EKD92563.1| hypothetical protein ACD_28C00403G0006 [uncultured bacterium]
Length = 335
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 119/226 (52%), Positives = 160/226 (70%), Gaps = 5/226 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ LALSQ+ FGK S++ L S + ISTGSL LDLALG GG+PKGRIVEI
Sbjct: 6 KKKAIELALSQIEKSFGKGSIMRLGES-KSIQVETISTGSLSLDLALG-GGIPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALHVI E QK GY A++D E+ALDP A+ +G+D +NLLI+QPD+ E
Sbjct: 64 YGPESSGKTTLALHVIAEVQKNKGYAAFIDAEHALDPDYAKKIGVDVDNLLISQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + +TL +S ++DVIV+DSVAAL+P+ EI + + Q+R+M+QALRK+ ++ +
Sbjct: 124 ALEITETLVRSNAVDVIVIDSVAALVPRAEIEGEMGDSHMGLQARLMSQALRKLTAAISK 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
S +IF+NQ+RF K G G E T GGNALKFY+++R+ + R
Sbjct: 184 SKVTVIFINQIRF--KIGVMYGN-PETTPGGNALKFYSSVRMDIRR 226
>gi|296454323|ref|YP_003661466.1| recA protein [Bifidobacterium longum subsp. longum JDM301]
gi|296183754|gb|ADH00636.1| recA protein [Bifidobacterium longum subsp. longum JDM301]
Length = 397
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 125/256 (48%), Positives = 170/256 (66%), Gaps = 7/256 (2%)
Query: 45 SSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTG 104
+ A+ P +D+ D K + AL AL+Q+ FGK S + L + VI TG
Sbjct: 5 TKPAKDPAAEDKHELDPK---RKAALDTALAQVEKSFGKGSAMRLGDQP-EQNVEVIPTG 60
Query: 105 SLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSL 164
SL LD+ALGIGGLPKGRIVEIYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+
Sbjct: 61 SLALDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAY 120
Query: 165 AEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMY 224
A +G+D ++L+++QPD+ E L + D L +SG++DVIV+DSVAAL+PK EI + +
Sbjct: 121 ARKLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSH 180
Query: 225 SDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAA 284
Q+R+M+QALRK+ +L Q+ T IF+NQ+R K G G E T+GG ALKFYA+
Sbjct: 181 VGLQARLMSQALRKMTGALAQAGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYAS 237
Query: 285 LRLRMMRTRLFKIADK 300
+RL + R + K D+
Sbjct: 238 VRLDIRRIQTLKNGDE 253
>gi|146305465|ref|YP_001185930.1| recA protein [Pseudomonas mendocina ymp]
gi|145573666|gb|ABP83198.1| recA protein [Pseudomonas mendocina ymp]
Length = 348
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 165/239 (69%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ L GS R VISTGSL LD+ALG+GGLP+GRI
Sbjct: 5 KSKALEAALSQIEKQFGKGSIMRL----GSDRTMDIDVISTGSLGLDIALGVGGLPRGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI EAQ+ G CA++D E+ALDP A +G++ + LL +QPD+
Sbjct: 61 VEIYGPESSGKTTLTLSVIAEAQRQGLTCAFVDAEHALDPIYAAKLGVNIDELLCSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L +VD LT+SG++++IVVDSVAAL+PK EI I + +R+M+QA+RKI +
Sbjct: 121 GEQALEIVDILTRSGAVNLIVVDSVAALVPKAEIEGEIGDSHVGLAARMMSQAMRKITGN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L S+T+ IF+NQ+R K G G E T+GGNALKFYA++RL + RT K ++V
Sbjct: 181 LKNSNTMCIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGEEV 236
>gi|213691840|ref|YP_002322426.1| recombinase A [Bifidobacterium longum subsp. infantis ATCC 15697 =
JCM 1222]
gi|384198983|ref|YP_005584726.1| recombinase RecA [Bifidobacterium longum subsp. infantis ATCC 15697
= JCM 1222]
gi|213523301|gb|ACJ52048.1| recA protein [Bifidobacterium longum subsp. infantis ATCC 15697 =
JCM 1222]
gi|320457935|dbj|BAJ68556.1| recombinase RecA [Bifidobacterium longum subsp. infantis ATCC 15697
= JCM 1222]
Length = 418
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 125/256 (48%), Positives = 170/256 (66%), Gaps = 7/256 (2%)
Query: 45 SSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTG 104
+ A+ P +D+ D K + AL AL+Q+ FGK S + L + VI TG
Sbjct: 26 TKPAKDPAAEDKHELDPK---RKAALDTALAQVEKSFGKGSAMRLGDQ-PEQNVEVIPTG 81
Query: 105 SLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSL 164
SL LD+ALGIGGLPKGRIVEIYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+
Sbjct: 82 SLALDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAY 141
Query: 165 AEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMY 224
A +G+D ++L+++QPD+ E L + D L +SG++DVIV+DSVAAL+PK EI + +
Sbjct: 142 ARKLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSH 201
Query: 225 SDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAA 284
Q+R+M+QALRK+ +L Q+ T IF+NQ+R K G G E T+GG ALKFYA+
Sbjct: 202 VGLQARLMSQALRKMTGALAQAGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYAS 258
Query: 285 LRLRMMRTRLFKIADK 300
+RL + R + K D+
Sbjct: 259 VRLDIRRIQTLKNGDE 274
>gi|46191337|ref|ZP_00206783.1| COG0468: RecA/RadA recombinase [Bifidobacterium longum DJO10A]
gi|189439147|ref|YP_001954228.1| recombinase A [Bifidobacterium longum DJO10A]
gi|227547654|ref|ZP_03977703.1| recombination protein A [Bifidobacterium longum subsp. longum ATCC
55813]
gi|317482460|ref|ZP_07941477.1| recA bacterial DNA recombination protein [Bifidobacterium sp.
12_1_47BFAA]
gi|322689410|ref|YP_004209144.1| recombinase RecA [Bifidobacterium longum subsp. infantis 157F]
gi|322691377|ref|YP_004220947.1| recombinase RecA [Bifidobacterium longum subsp. longum JCM 1217]
gi|419846676|ref|ZP_14369904.1| RecA protein [Bifidobacterium longum subsp. longum 1-6B]
gi|419855760|ref|ZP_14378510.1| RecA protein [Bifidobacterium longum subsp. longum 44B]
gi|189427582|gb|ACD97730.1| RecA/RadA recombinase [Bifidobacterium longum DJO10A]
gi|227211909|gb|EEI79805.1| recombination protein A [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|316916120|gb|EFV37525.1| recA bacterial DNA recombination protein [Bifidobacterium sp.
12_1_47BFAA]
gi|320456233|dbj|BAJ66855.1| recombinase RecA [Bifidobacterium longum subsp. longum JCM 1217]
gi|320460746|dbj|BAJ71366.1| recombinase RecA [Bifidobacterium longum subsp. infantis 157F]
gi|386413456|gb|EIJ28062.1| RecA protein [Bifidobacterium longum subsp. longum 1-6B]
gi|386414983|gb|EIJ29524.1| RecA protein [Bifidobacterium longum subsp. longum 44B]
Length = 418
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 125/256 (48%), Positives = 170/256 (66%), Gaps = 7/256 (2%)
Query: 45 SSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTG 104
+ A+ P +D+ D K + AL AL+Q+ FGK S + L + VI TG
Sbjct: 26 TKPAKDPAAEDKHELDPK---RKAALDTALAQVEKSFGKGSAMRLGDQ-PEQNVEVIPTG 81
Query: 105 SLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSL 164
SL LD+ALGIGGLPKGRIVEIYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+
Sbjct: 82 SLALDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAY 141
Query: 165 AEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMY 224
A +G+D ++L+++QPD+ E L + D L +SG++DVIV+DSVAAL+PK EI + +
Sbjct: 142 ARKLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSH 201
Query: 225 SDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAA 284
Q+R+M+QALRK+ +L Q+ T IF+NQ+R K G G E T+GG ALKFYA+
Sbjct: 202 VGLQARLMSQALRKMTGALAQAGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYAS 258
Query: 285 LRLRMMRTRLFKIADK 300
+RL + R + K D+
Sbjct: 259 VRLDIRRIQTLKNGDE 274
>gi|340360394|ref|ZP_08682864.1| recombination protein A [Actinomyces sp. oral taxon 448 str. F0400]
gi|339883595|gb|EGQ73438.1| recombination protein A [Actinomyces sp. oral taxon 448 str. F0400]
Length = 400
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 120/241 (49%), Positives = 162/241 (67%), Gaps = 8/241 (3%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPK 119
+ + AL ALSQ+ FGK S++ R R PV I TGS LD+ALGIGGLP+
Sbjct: 6 QTQDRSKALATALSQIDKSFGKGSVM---RLGDDTRPPVAVIPTGSTALDVALGIGGLPR 62
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GR+VEIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A+A+G+D +NLL++Q
Sbjct: 63 GRVVEIYGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPVYAKALGVDTDNLLVSQ 122
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + D L +SG +D+IVVDSVAAL+PK EI + + Q+R+M+QALRKI
Sbjct: 123 PDTGEQALEITDMLIRSGGLDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKI 182
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
+L + T IF+NQ+R K G G E T+GG ALKFYA++R+ + RT+ K D
Sbjct: 183 TGALSATGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYASVRIDVRRTQTLKDGD 239
Query: 300 K 300
+
Sbjct: 240 Q 240
>gi|315122763|ref|YP_004063252.1| recombinase A [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313496165|gb|ADR52764.1| recombinase A [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 348
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 121/239 (50%), Positives = 162/239 (67%), Gaps = 4/239 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRI 122
M K AL ALSQ+ +GK S++ L G V+S+GSL LD+ALGIGG PKGRI
Sbjct: 1 MDKSKALDAALSQIERLYGKGSIMQLGSQSSISEGVEVVSSGSLGLDIALGIGGFPKGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTLALH I ++QK GG CA++D E+ALD A +G+D +NLLI+QPD+
Sbjct: 61 VEIYGPESSGKTTLALHAIAQSQKAGGTCAFVDAEHALDSVYARKLGVDLKNLLISQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++D+IVVDSVAAL P+ EI + Q+R+M+QALRK+ S
Sbjct: 121 GEQALEITDMLVRSGAVDIIVVDSVAALTPRAEIEGDMGESLPGLQARLMSQALRKLTGS 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 ISRSNCILIFINQIRM--KIGVMFGS-PETTTGGNALKFYASIRLDIRRIGAIKEKDAI 236
>gi|317050275|ref|YP_004111391.1| recA protein [Desulfurispirillum indicum S5]
gi|316945359|gb|ADU64835.1| recA protein [Desulfurispirillum indicum S5]
Length = 357
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 163/230 (70%), Gaps = 10/230 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKGR 121
+K AL LA++Q+ GK S++ L GS P V+ +G+L LD+ALG+GG P+GR
Sbjct: 3 EKQKALELAIAQIEKAHGKGSIMRL----GSGEIPAIPVVPSGNLALDIALGVGGYPRGR 58
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
++EIYG E+SGKTTL+LH I EAQK+GG A++D ENA D A +GI+ E LL++QPD
Sbjct: 59 VIEIYGPESSGKTTLSLHAIAEAQKMGGTAAFIDAENAFDAMYARKIGINTEALLVSQPD 118
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
E+ L + DTL +SG+IDVIV+DSVAAL+PK E+ + AQ+R+M+QALRK+
Sbjct: 119 YGESALEIADTLVRSGAIDVIVIDSVAALVPKAELEGEMGEATMGAQARLMSQALRKLTG 178
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
++ +SHT++IF+NQ+R +K G G E T+GGNALKFYA++RL + R
Sbjct: 179 AINKSHTVVIFINQIR--SKIGVMFGN-PETTTGGNALKFYASMRLDIRR 225
>gi|384201328|ref|YP_005587075.1| recombinase RecA [Bifidobacterium longum subsp. longum KACC 91563]
gi|291516744|emb|CBK70360.1| RecA protein [Bifidobacterium longum subsp. longum F8]
gi|338754335|gb|AEI97324.1| recombinase RecA [Bifidobacterium longum subsp. longum KACC 91563]
Length = 418
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 125/256 (48%), Positives = 170/256 (66%), Gaps = 7/256 (2%)
Query: 45 SSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTG 104
+ A+ P +D+ D K + AL AL+Q+ FGK S + L + VI TG
Sbjct: 26 TKPAKDPAAEDKHELDPK---RKAALDTALAQVEKSFGKGSAMRLGDQ-PEQNVEVIPTG 81
Query: 105 SLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSL 164
SL LD+ALGIGGLPKGRIVEIYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+
Sbjct: 82 SLALDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAY 141
Query: 165 AEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMY 224
A +G+D ++L+++QPD+ E L + D L +SG++DVIV+DSVAAL+PK EI + +
Sbjct: 142 ARKLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSH 201
Query: 225 SDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAA 284
Q+R+M+QALRK+ +L Q+ T IF+NQ+R K G G E T+GG ALKFYA+
Sbjct: 202 VGLQARLMSQALRKMTGALAQAGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYAS 258
Query: 285 LRLRMMRTRLFKIADK 300
+RL + R + K D+
Sbjct: 259 VRLDIRRIQTLKNGDE 274
>gi|373487512|ref|ZP_09578179.1| RecA protein [Holophaga foetida DSM 6591]
gi|372008587|gb|EHP09212.1| RecA protein [Holophaga foetida DSM 6591]
Length = 352
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/218 (51%), Positives = 155/218 (71%), Gaps = 3/218 (1%)
Query: 70 LRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGRE 129
L AL+ + FGK S++ L + VISTGS+ LD ALG+GG+PKGRIVE+YG E
Sbjct: 13 LNRALADIERAFGKGSIMKLGDRMNADGIEVISTGSISLDSALGVGGVPKGRIVEVYGPE 72
Query: 130 ASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSV 189
ASGKTTLALH++ EAQK GG AY+D E+ALDP A +G+D +NL I+QPDS E L +
Sbjct: 73 ASGKTTLALHMVAEAQKKGGLAAYIDAEHALDPEYARKLGVDVDNLFISQPDSGEQALEI 132
Query: 190 VDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTL 249
D L +SG++D+IVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ ++++
Sbjct: 133 CDQLVRSGALDIIVVDSVAALVPKAEIDGEMGDTHVGLQARLMSQALRKMTATISRTNSC 192
Query: 250 IIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRL 287
++F+NQ+R K G G E T+GGNALKFYA++RL
Sbjct: 193 VVFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRL 227
>gi|452752974|ref|ZP_21952713.1| RecA protein [alpha proteobacterium JLT2015]
gi|451959796|gb|EMD82213.1| RecA protein [alpha proteobacterium JLT2015]
Length = 347
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 162/238 (68%), Gaps = 4/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL+Q+ FGK S + L + + ISTGS+ LDLALG+GG P+GRI+
Sbjct: 12 MDKQKALDAALAQIDRAFGKGSAMKLGQQE-KQEIEAISTGSIGLDLALGVGGFPRGRII 70
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G+D + L+++QPD+
Sbjct: 71 EIYGPESSGKTTLALHAIAEAQKTGGTAAFVDAEHALDPIYAKKLGVDIDELIVSQPDTG 130
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +S ++DV+VVDSVAAL P+ EI + + Q+R+M+QALRK+ S+
Sbjct: 131 EQALEITDTLVRSNAVDVLVVDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKLTGSI 190
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S T +IF+NQVR K G G E T+GGNALKFYA+ RL + RT K D++
Sbjct: 191 NRSRTTVIFINQVRM--KIGVMYGN-PETTTGGNALKFYASCRLDIRRTGQIKDRDEI 245
>gi|416157769|ref|ZP_11605292.1| recombinase A [Moraxella catarrhalis 101P30B1]
gi|416224493|ref|ZP_11626556.1| recombinase A [Moraxella catarrhalis 103P14B1]
gi|416235610|ref|ZP_11630241.1| recombinase A [Moraxella catarrhalis 12P80B1]
gi|416253822|ref|ZP_11638423.1| recombinase A [Moraxella catarrhalis O35E]
gi|326562574|gb|EGE12887.1| recombinase A [Moraxella catarrhalis 103P14B1]
gi|326564101|gb|EGE14341.1| recombinase A [Moraxella catarrhalis 12P80B1]
gi|326573518|gb|EGE23481.1| recombinase A [Moraxella catarrhalis 101P30B1]
gi|326577768|gb|EGE27641.1| recombinase A [Moraxella catarrhalis O35E]
Length = 349
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 121/250 (48%), Positives = 168/250 (67%), Gaps = 10/250 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL+ AL+Q+ FGK +++ L V+STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KEKALKAALAQIEKQFGKNTIMHLGDETAKLDVDVVSTGSLGLDIALGIGGLPKGRIIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTL L I E QK GG CA++D E+ALDP A+ +G++ ++LL++QPD+ E
Sbjct: 65 FGPESSGKTTLTLQTIAECQKQGGTCAFIDAEHALDPIYAKKLGVNIDDLLVSQPDNGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 125 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNILE 305
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 185 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKDGDEI---- 237
Query: 306 VVNIGSMIRL 315
IGS R+
Sbjct: 238 ---IGSETRV 244
>gi|254486860|ref|ZP_05100065.1| protein RecA [Roseobacter sp. GAI101]
gi|214043729|gb|EEB84367.1| protein RecA [Roseobacter sp. GAI101]
Length = 356
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 119/243 (48%), Positives = 164/243 (67%), Gaps = 3/243 (1%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D+ K +K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGLP
Sbjct: 10 DNKKQAEKQKALDSALAQIERQFGKGSIMKLGAPGAIQDIKSSSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
GRI+EIYG E+SGKTTL LH + E QK GG CA++D E+ALDP A +G+D + LLI+
Sbjct: 70 MGRIIEIYGPESSGKTTLTLHCVAEQQKAGGVCAFVDAEHALDPQYARKLGVDIDELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VDTL +SG+++++VVDSVAAL PK E+ + Q+R+M+QA+RK
Sbjct: 130 QPDTGEQALEIVDTLVRSGAVNMVVVDSVAALTPKSELEGDMGDSSVGVQARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S+ ++IF+NQ+R K G G E TSGGNALKFY+++RL + R K
Sbjct: 190 LTGSISRSNCMVIFINQIRM--KIGVMFGS-PETTSGGNALKFYSSVRLDIRRIGALKDR 246
Query: 299 DKV 301
D+V
Sbjct: 247 DEV 249
>gi|160933139|ref|ZP_02080528.1| hypothetical protein CLOLEP_01982 [Clostridium leptum DSM 753]
gi|156868213|gb|EDO61585.1| RecA protein [Clostridium leptum DSM 753]
Length = 391
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 120/245 (48%), Positives = 166/245 (67%), Gaps = 4/245 (1%)
Query: 52 EFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLA 111
+F D ++ + K AL AL Q+ FGK +++ L + + I TGSL LDLA
Sbjct: 10 KFKDSGGNETMAVDKSKALETALGQIEKQFGKGAVMRLGQNE-AMHVDAIPTGSLSLDLA 68
Query: 112 LGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGID 171
LGIGGLP+GRIVEIYG E+SGKTTLALH I E QK GGY A++DVE+ALDP A A+G+D
Sbjct: 69 LGIGGLPRGRIVEIYGPESSGKTTLALHCIAEGQKSGGYAAFIDVEHALDPVYARALGVD 128
Query: 172 AENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRI 231
++LL++QPD+ E L + + L +SG+IDVIVVDSVAAL+P+ EI + + Q+R+
Sbjct: 129 VDSLLVSQPDTGEQALEITEALVRSGAIDVIVVDSVAALVPRAEIEGEMGDSHVGLQARL 188
Query: 232 MTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
M+QALRK+ ++ +S+ + IF+NQ+R K G G EVT GG ALKFY+++R+ + R
Sbjct: 189 MSQALRKLAGAISKSNCVAIFINQLR--EKVGVMYGN-PEVTPGGRALKFYSSVRIDIRR 245
Query: 292 TRLFK 296
K
Sbjct: 246 IETLK 250
>gi|157961023|ref|YP_001501057.1| recombinase A [Shewanella pealeana ATCC 700345]
gi|189039609|sp|A8H1T5.1|RECA_SHEPA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|157846023|gb|ABV86522.1| recA protein [Shewanella pealeana ATCC 700345]
Length = 355
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 161/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL L Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KEKALNAVLGQIEKQFGKGSIMKL----GEDRSMDVETISTGSLALDVALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQK G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLEVIAAAQKQGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K ++V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDREEV 238
>gi|210622626|ref|ZP_03293286.1| hypothetical protein CLOHIR_01234 [Clostridium hiranonis DSM 13275]
gi|210154127|gb|EEA85133.1| hypothetical protein CLOHIR_01234 [Clostridium hiranonis DSM 13275]
Length = 361
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 165/237 (69%), Gaps = 4/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL AL ++ DFGK S++ L S ISTGS+ LD+A+GIGGLPKGRIVE
Sbjct: 6 EKLKALNEALGKIEKDFGKGSVMRLGEAT-SLEIDTISTGSIGLDIAIGIGGLPKGRIVE 64
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTT+ALH + EAQK GG A++D E+ALDP A+A+G+D ENL+I+QPD+ E
Sbjct: 65 IYGPESSGKTTVALHCVAEAQKDGGIAAFIDAEHALDPVYAKALGVDVENLIISQPDTGE 124
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + + L +SG+ID+IVVDSVAAL+PK EI + + Q+R+M+QALRK+ S+
Sbjct: 125 QALEIAEALIRSGAIDIIVVDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTGSIK 184
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ + IF+NQ+R K G G E T+GG ALKFY+++RL + + K DKV
Sbjct: 185 KSNCVAIFINQLR--EKVGIMFGNP-ETTTGGRALKFYSSVRLDVRKIDTIKQGDKV 238
>gi|385233454|ref|YP_005794796.1| recombinase A [Ketogulonicigenium vulgare WSH-001]
gi|343462365|gb|AEM40800.1| recombinase A [Ketogulonicigenium vulgare WSH-001]
Length = 362
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 121/245 (49%), Positives = 166/245 (67%), Gaps = 9/245 (3%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI---STGSLKLDLALGIGG 116
D K K AL AL+Q+ FGK +++ R G+ P I STGSL LD+ALGIGG
Sbjct: 11 DKKASDKQKALDSALAQIERQFGKGAIM---RLGGANALPEIEATSTGSLGLDIALGIGG 67
Query: 117 LPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLL 176
LPKGRI+EI+G E+SGKTTL LH + E QK GG CA++D E+ALDPS A+ +G++ + LL
Sbjct: 68 LPKGRIIEIFGPESSGKTTLTLHAVAEEQKKGGVCAFVDAEHALDPSYAKKLGVNLDELL 127
Query: 177 IAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQAL 236
I+QPD+ E L +VDTL +SG++ ++VVDSVAAL PK EI + +R+M+QA+
Sbjct: 128 ISQPDTGEQALEIVDTLVRSGAVSMVVVDSVAALTPKSEIEGDMGDSSVGVHARLMSQAM 187
Query: 237 RKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
RK+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 188 RKLTGSISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIK 244
Query: 297 IADKV 301
D+V
Sbjct: 245 DRDEV 249
>gi|160876375|ref|YP_001555691.1| recombinase A [Shewanella baltica OS195]
gi|373950462|ref|ZP_09610423.1| recA protein [Shewanella baltica OS183]
gi|378709576|ref|YP_005274470.1| recA protein [Shewanella baltica OS678]
gi|386323701|ref|YP_006019818.1| recA protein [Shewanella baltica BA175]
gi|418025432|ref|ZP_12664410.1| Protein recA [Shewanella baltica OS625]
gi|189039607|sp|A9KYG0.1|RECA_SHEB9 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|160861897|gb|ABX50431.1| recA protein [Shewanella baltica OS195]
gi|315268565|gb|ADT95418.1| recA protein [Shewanella baltica OS678]
gi|333817846|gb|AEG10512.1| recA protein [Shewanella baltica BA175]
gi|353535044|gb|EHC04608.1| Protein recA [Shewanella baltica OS625]
gi|373887062|gb|EHQ15954.1| recA protein [Shewanella baltica OS183]
Length = 355
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 161/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL L Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KEKALAAVLIQIEKQFGKGSIMKL----GEDRSMDVETISTGSLSLDVALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDGDEV 238
>gi|325983480|ref|YP_004295882.1| recA protein [Nitrosomonas sp. AL212]
gi|325532999|gb|ADZ27720.1| recA protein [Nitrosomonas sp. AL212]
Length = 344
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 120/240 (50%), Positives = 167/240 (69%), Gaps = 11/240 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL +AL+Q+ FGK S++ L + V+STGSL LD+ALG+GGLP+GRIVEI
Sbjct: 5 RSKALDVALAQIEKQFGKGSIMRLGANDVAYDIQVVSTGSLGLDIALGVGGLPRGRIVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QK+GG A++D E+ALDP A+ +G++ + LLI+QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAEMQKVGGTAAFIDAEHALDPQYAQKIGVNVKELLISQPDNGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEI----GVPINGMYSDAQSRIMTQALRKIHY 241
L + D L +SGS+D+IV+DSVAAL P+ EI G P G+ Q+R+M+QALRK+
Sbjct: 125 ALEIADMLVRSGSVDIIVIDSVAALTPRAEIEGDMGDPQMGL----QARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+
Sbjct: 181 NIKRSNTMVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGSIKKGDET 237
>gi|406919471|gb|EKD57755.1| hypothetical protein ACD_57C00159G0005 [uncultured bacterium]
Length = 359
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 118/241 (48%), Positives = 167/241 (69%), Gaps = 16/241 (6%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
QK A++LA+ Q+ +GK S++ L G R+ +I TGS+ LDLALG+GGLP+GR
Sbjct: 21 QKLQAIKLAMEQIEKQYGKGSIMKL----GDRQSVKVDIIPTGSIALDLALGVGGLPRGR 76
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG EASGKTTLALHV+ EAQK GG A++D E+ALDP+ AE +G++ ++LL++QPD
Sbjct: 77 IVEIYGPEASGKTTLALHVVAEAQKRGGQAAFIDAEHALDPARAETIGVNLDDLLMSQPD 136
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
S E L + +TL +SG++DVIVVDSVAAL+P+ E+ + Q+R+M+QALRK+
Sbjct: 137 SGEQALEITETLIRSGAVDVIVVDSVAALVPRAELEGEMGDAVMGMQARLMSQALRKLTG 196
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRM---DEVTSGGNALKFYAALRLRMMRTRLFKIA 298
++ +S T++IF NQ+R Q +G M E T GG ALKFY+++R+ + R K
Sbjct: 197 AISKSKTILIFTNQLR------QKIGVMFGNPETTPGGLALKFYSSVRIDIRRIDTIKEG 250
Query: 299 D 299
D
Sbjct: 251 D 251
>gi|50084563|ref|YP_046073.1| recombinase A [Acinetobacter sp. ADP1]
gi|1172879|sp|P42438.1|RECA_ACIAD RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|440089|gb|AAC27115.1| RecA [Acinetobacter sp. ADP1]
gi|49530539|emb|CAG68251.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Acinetobacter sp. ADP1]
Length = 349
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 160/236 (67%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|71361898|gb|AAZ30056.1| recombinant protein A [Moraxella catarrhalis O35E]
Length = 349
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 121/250 (48%), Positives = 168/250 (67%), Gaps = 10/250 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL+ AL+Q+ FGK +++ L V+STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KEKALKAALAQIEKQFGKNTIMHLGDETAKLDVDVVSTGSLGLDIALGIGGLPKGRIIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTL L I E QK GG CA++D E+ALDP A+ +G++ ++LL++QPD+ E
Sbjct: 65 FGPESSGKTTLTLQTIAECQKQGGTCAFIDAEHALDPIYAKKLGVNIDDLLVSQPDNGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 125 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNILE 305
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 185 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKDGDEI---- 237
Query: 306 VVNIGSMIRL 315
IGS R+
Sbjct: 238 ---IGSETRV 244
>gi|88858311|ref|ZP_01132953.1| RecA protein (Recombinase A) [Pseudoalteromonas tunicata D2]
gi|88819928|gb|EAR29741.1| RecA protein (Recombinase A) [Pseudoalteromonas tunicata D2]
Length = 353
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 120/239 (50%), Positives = 166/239 (69%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL ALSQ+ FGK S++ L G + ISTGSL +D+ALGIGGLP GRI
Sbjct: 5 KEKALSAALSQIERQFGKGSIMKL----GDSQALDIESISTGSLGIDIALGIGGLPAGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEI+G E+SGKTTL L VI EAQK G CA++D E+ALDP AE +G++ ++LL++QPD+
Sbjct: 61 VEIFGPESSGKTTLTLQVIAEAQKKGKTCAFIDAEHALDPVYAEKLGVNIKDLLVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DV+++DSVAAL PK EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEICDMLVRSGAVDVVIIDSVAALTPKAEIEGDMGDHHVGLQARLMSQALRKLTGN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S+TL+IF+NQ+R K G G E T+GGNALKFYA++R+ + RT K D+V
Sbjct: 181 IKRSNTLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRIDIRRTGSVKEGDEV 236
>gi|84517389|ref|ZP_01004742.1| recombinase A [Loktanella vestfoldensis SKA53]
gi|84508753|gb|EAQ05217.1| recombinase A [Loktanella vestfoldensis SKA53]
Length = 359
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 121/245 (49%), Positives = 165/245 (67%), Gaps = 9/245 (3%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI---STGSLKLDLALGIGG 116
D K K+ AL AL+Q+ FGK S++ L G + P I STGSL LD+ALGIGG
Sbjct: 11 DKKTADKEKALESALAQIERQFGKGSIMKLG---GQNQMPEIEATSTGSLGLDIALGIGG 67
Query: 117 LPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLL 176
LPKGR++EIYG E+SGKTTL LH I E QK GG CA++D E+ALDP A+ +G++ + LL
Sbjct: 68 LPKGRVIEIYGPESSGKTTLTLHSIAEEQKKGGICAFVDAEHALDPQYAKKLGVNLDELL 127
Query: 177 IAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQAL 236
I+QPD+ E L +VDTL +SG++ ++VVDSVAAL PK E+ + +R+M+QA+
Sbjct: 128 ISQPDTGEQALEIVDTLVRSGAVSLVVVDSVAALTPKSELEGDMGDSSVGVHARLMSQAM 187
Query: 237 RKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
RK+ S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 188 RKLTGSINRSGCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIK 244
Query: 297 IADKV 301
D+V
Sbjct: 245 DRDEV 249
>gi|256822657|ref|YP_003146620.1| recA protein [Kangiella koreensis DSM 16069]
gi|256796196|gb|ACV26852.1| recA protein [Kangiella koreensis DSM 16069]
Length = 346
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 117/236 (49%), Positives = 163/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL+Q+ FGK S++ L +R ISTGSL LD+ALGIGGLPKGR+VEI
Sbjct: 5 KKKALGAALTQIERQFGKGSIMRLGDNSAARGIGTISTGSLGLDIALGIGGLPKGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I QK GG A++D E+ALDP+ AE +G++ ++L+++QPD+ E
Sbjct: 65 YGPESSGKTTLALQAIASCQKDGGTAAFVDAEHALDPTYAEKLGVNLDDLIVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D++VVDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+TL +F+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 185 SNTLCVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQIKQGDEI 237
>gi|296112538|ref|YP_003626476.1| recombination protein RecA [Moraxella catarrhalis RH4]
gi|416216870|ref|ZP_11623904.1| recombinase A [Moraxella catarrhalis 7169]
gi|416229548|ref|ZP_11628086.1| recombinase A [Moraxella catarrhalis 46P47B1]
gi|416240237|ref|ZP_11632301.1| recombinase A [Moraxella catarrhalis BC1]
gi|416242132|ref|ZP_11633266.1| recombinase A [Moraxella catarrhalis BC7]
gi|416247761|ref|ZP_11635908.1| recombinase A [Moraxella catarrhalis BC8]
gi|416249097|ref|ZP_11636375.1| recombinase A [Moraxella catarrhalis CO72]
gi|421779352|ref|ZP_16215845.1| recombination protein RecA [Moraxella catarrhalis RH4]
gi|295920232|gb|ADG60583.1| recombination protein RecA [Moraxella catarrhalis BBH18]
gi|326561307|gb|EGE11665.1| recombinase A [Moraxella catarrhalis 7169]
gi|326562548|gb|EGE12863.1| recombinase A [Moraxella catarrhalis 46P47B1]
gi|326566176|gb|EGE16330.1| recombinase A [Moraxella catarrhalis BC1]
gi|326569092|gb|EGE19155.1| recombinase A [Moraxella catarrhalis BC8]
gi|326571693|gb|EGE21708.1| recombinase A [Moraxella catarrhalis BC7]
gi|326576322|gb|EGE26232.1| recombinase A [Moraxella catarrhalis CO72]
gi|407813492|gb|EKF84273.1| recombination protein RecA [Moraxella catarrhalis RH4]
Length = 349
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 121/250 (48%), Positives = 168/250 (67%), Gaps = 10/250 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL+ AL+Q+ FGK +++ L V+STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KEKALKAALAQIEKQFGKNTIMHLGDETAKLDVDVVSTGSLGLDIALGIGGLPKGRIIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTL L I E QK GG CA++D E+ALDP A+ +G++ ++LL++QPD+ E
Sbjct: 65 FGPESSGKTTLTLQTIAECQKQGGTCAFIDAEHALDPIYAKKLGVNIDDLLVSQPDNGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 125 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNILE 305
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 185 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKDGDEI---- 237
Query: 306 VVNIGSMIRL 315
IGS R+
Sbjct: 238 ---IGSETRV 244
>gi|126175318|ref|YP_001051467.1| recombinase A [Shewanella baltica OS155]
gi|153001639|ref|YP_001367320.1| recombinase A [Shewanella baltica OS185]
gi|217972430|ref|YP_002357181.1| recombinase A [Shewanella baltica OS223]
gi|386342071|ref|YP_006038437.1| protein recA [Shewanella baltica OS117]
gi|166220677|sp|A3D785.1|RECA_SHEB5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|166220678|sp|A6WR18.1|RECA_SHEB8 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|254790445|sp|B8E8U2.1|RECA_SHEB2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|125998523|gb|ABN62598.1| recA protein [Shewanella baltica OS155]
gi|151366257|gb|ABS09257.1| recA protein [Shewanella baltica OS185]
gi|217497565|gb|ACK45758.1| recA protein [Shewanella baltica OS223]
gi|334864472|gb|AEH14943.1| Protein recA [Shewanella baltica OS117]
Length = 355
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 161/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL L Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KEKALAAVLIQIEKQFGKGSIMKL----GEDRSMDVETISTGSLSLDVALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDGDEV 238
>gi|406708467|ref|YP_006758819.1| recombinase A [alpha proteobacterium HIMB59]
gi|406654243|gb|AFS49642.1| RecA protein [alpha proteobacterium HIMB59]
Length = 353
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 117/238 (49%), Positives = 167/238 (70%), Gaps = 6/238 (2%)
Query: 68 NALRLALSQLANDFGKESMLSL-KRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIY 126
N L+ +S + +GK S++ L K+ V STGSL LD+ALGIGGLPKGR+VE+Y
Sbjct: 8 NKLKTVISSIEKSYGKGSIMMLGKKDEDMGNVDVYSTGSLGLDIALGIGGLPKGRVVEVY 67
Query: 127 GREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENL 186
G E+SGKTTL LHVI EAQK+GG CA++D E+ALDP A+ +G++ + LLI+QPD+ E
Sbjct: 68 GPESSGKTTLTLHVIAEAQKMGGTCAFIDAEHALDPGYAKKLGVNIDELLISQPDTGEQA 127
Query: 187 LSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQS 246
L + DTL KS ID++V+DSVAAL+P+ E+ + Q+R+M+QALRK+ S+ ++
Sbjct: 128 LEIADTLVKSEGIDLLVIDSVAALVPRAELEGEMGDSLPGLQARLMSQALRKLTSSISKT 187
Query: 247 HTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNIL 304
+T+++F+NQ+R K G G E T+GGNALKFY+++RL + R+ I DK NI+
Sbjct: 188 NTMVVFINQLRM--KIGVMFGS-PETTTGGNALKFYSSVRLDI--RRIGAIKDKDNII 240
>gi|312132580|ref|YP_003999919.1| reca [Bifidobacterium longum subsp. longum BBMN68]
gi|311773522|gb|ADQ03010.1| RecA [Bifidobacterium longum subsp. longum BBMN68]
Length = 418
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 125/256 (48%), Positives = 170/256 (66%), Gaps = 7/256 (2%)
Query: 45 SSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTG 104
+ A+ P +D+ D K + AL AL+Q+ FGK S + L + VI TG
Sbjct: 26 TKPAKDPAAEDKHELDPK---RKAALDTALAQVEKSFGKGSAMRLGDQ-PEQNVEVIPTG 81
Query: 105 SLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSL 164
SL LD+ALGIGGLPKGRIVEIYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+
Sbjct: 82 SLALDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKKGGVSAYIDAEHALDPAY 141
Query: 165 AEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMY 224
A +G+D ++L+++QPD+ E L + D L +SG++DVIV+DSVAAL+PK EI + +
Sbjct: 142 ARKLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSH 201
Query: 225 SDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAA 284
Q+R+M+QALRK+ +L Q+ T IF+NQ+R K G G E T+GG ALKFYA+
Sbjct: 202 VGLQARLMSQALRKMTGALAQAGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYAS 258
Query: 285 LRLRMMRTRLFKIADK 300
+RL + R + K D+
Sbjct: 259 VRLDIRRIQTLKNGDE 274
>gi|410447432|ref|ZP_11301528.1| RecA protein [SAR86 cluster bacterium SAR86E]
gi|409979707|gb|EKO36465.1| RecA protein [SAR86 cluster bacterium SAR86E]
Length = 339
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 120/239 (50%), Positives = 163/239 (68%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
KD L ALSQ+ FGK +++ + G R P +STGSL LD+ALGIGGLPKGR+
Sbjct: 8 KDKNLNEALSQIEKQFGKGTVMKM----GDREIVDIPSVSTGSLGLDIALGIGGLPKGRV 63
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEI+G E+SGKTTL L I E QK GG A++D E+ALDP+ AE +G+D + LL++QPD+
Sbjct: 64 VEIFGPESSGKTTLTLQAIAECQKAGGTAAFIDAEHALDPNYAEKLGVDVDELLLSQPDT 123
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L V D L KSGS+D+IVVDSVAAL P+ EI + + Q+R+M+QALRKI +
Sbjct: 124 GEQALEVTDMLVKSGSVDLIVVDSVAALTPRAEIEGDMGDHHVGLQARLMSQALRKITGN 183
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S+ ++IF+NQ+R K G G E T+GGNALKFY+++RL + R K ++V
Sbjct: 184 IQRSNAMVIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRIGAVKEGEEV 239
>gi|148897709|emb|CAM18508.1| recombinase A [Ochrobactrum gallinifaecis]
Length = 238
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/201 (57%), Positives = 147/201 (73%), Gaps = 3/201 (1%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALGIGGLPKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+AL
Sbjct: 5 VPTGSLSLDIALGIGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHAL 64
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 65 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 124
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALK 280
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+R K G G E T+GGNALK
Sbjct: 125 GDSLPGLQARLMSQALRKLTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALK 181
Query: 281 FYAALRLRMMRTRLFKIADKV 301
FYA++RL + R K D+V
Sbjct: 182 FYASVRLDIRRIGSIKERDEV 202
>gi|409202684|ref|ZP_11230887.1| recombinase A [Pseudoalteromonas flavipulchra JG1]
Length = 351
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 162/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ L G + ISTGSL LD+ALGIGGLP GRI
Sbjct: 5 KQKALDAALSQIERQFGKGSIMKL----GENKALDIEAISTGSLGLDIALGIGGLPTGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L I EAQKLG CA++D E+ALDP AE +G++ + LL++QPD+
Sbjct: 61 VEIYGPESSGKTTLTLQAIAEAQKLGKTCAFVDAEHALDPIYAEKLGVNVDELLVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++D++V+DSVAAL PK EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEICDMLVRSGAVDLVVIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTAN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S+TL IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 181 IKRSNTLCIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGSVKEGDEV 236
>gi|378822355|ref|ZP_09845145.1| RecA protein [Sutterella parvirubra YIT 11816]
gi|378598826|gb|EHY31924.1| RecA protein [Sutterella parvirubra YIT 11816]
Length = 376
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/237 (48%), Positives = 164/237 (69%), Gaps = 4/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
++ AL +AL+ + FGK +++ + +STGSL LDLALG+GGLP+GRI+E
Sbjct: 18 ERKKALSVALANIEKQFGKGAIMRMAEGTEIEDIDTVSTGSLGLDLALGVGGLPRGRIIE 77
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
++G E+SGKTTL LHVI E QKLGG CA++D E+ALD A+ +G+D NLL++QPD+ E
Sbjct: 78 VFGPESSGKTTLTLHVIAEMQKLGGTCAFIDAEHALDIQYAKRLGVDVPNLLLSQPDTGE 137
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SGS+D+IVVDSVAAL PK EI + Q+R+M+QALRK+ S+
Sbjct: 138 QALEIADALVRSGSVDLIVVDSVAALTPKSEIEGDMGEALPGLQARLMSQALRKLTGSIT 197
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ ++++F+NQ+R K G G G E T+GGNALKFY+++RL + RT K D+V
Sbjct: 198 RTKSMVVFINQIRM--KIG-GYGN-PETTTGGNALKFYSSVRLDIRRTGGIKKGDEV 250
>gi|148897705|emb|CAM18506.1| recombinase A [Ochrobactrum grignonense]
gi|148897707|emb|CAM18507.1| recombinase A [Ochrobactrum grignonense]
Length = 247
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/201 (56%), Positives = 147/201 (73%), Gaps = 3/201 (1%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLPKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+AL
Sbjct: 3 VPTGSLSLDIALGVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHAL 62
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 63 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 122
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALK 280
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+R K G G E T+GGNALK
Sbjct: 123 GDSLPGLQARLMSQALRKLTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALK 179
Query: 281 FYAALRLRMMRTRLFKIADKV 301
FYA++RL + R K D+V
Sbjct: 180 FYASVRLDIRRIGSIKERDEV 200
>gi|148887241|emb|CAM12787.1| recombinase A [Ochrobactrum pseudogrignonense]
Length = 251
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/201 (56%), Positives = 147/201 (73%), Gaps = 3/201 (1%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLPKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+AL
Sbjct: 4 VPTGSLSLDIALGVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHAL 63
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 64 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 123
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALK 280
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+R K G G E T+GGNALK
Sbjct: 124 GDSLPGLQARLMSQALRKLTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALK 180
Query: 281 FYAALRLRMMRTRLFKIADKV 301
FYA++RL + R K D+V
Sbjct: 181 FYASVRLDIRRIGSIKERDEV 201
>gi|322380801|ref|ZP_08054907.1| recombinase A [Helicobacter suis HS5]
gi|321146805|gb|EFX41599.1| recombinase A [Helicobacter suis HS5]
Length = 341
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 163/235 (69%), Gaps = 9/235 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI---STGSLKLDLALGIGGLPKGR 121
QK AL LA+ Q+ FGK +++ L G + I STGSL LD+ALGIGG+PKGR
Sbjct: 4 QKQKALELAIKQIDKQFGKGALMRL----GDKEVEHIEATSTGSLGLDMALGIGGVPKGR 59
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVE+YG E+SGKTTL LH+I +AQ+ GG CA++D E+ALD A+ +G+D +NLLI+QPD
Sbjct: 60 IVEVYGPESSGKTTLTLHIIAQAQREGGTCAFIDAEHALDVQYAKKLGVDTDNLLISQPD 119
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L +++TL +SG++DVIVVDSVAAL P+ EI + + Q+R+M+QALRKI
Sbjct: 120 TGEEALEILETLARSGAVDVIVVDSVAALTPRAEIEGDMGDQHVGLQARLMSQALRKITG 179
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
L + +T +IF+NQ+R + G G E T+GGNALKFYA++R+ + R K
Sbjct: 180 ILHKMNTTLIFINQIRMKIGT-MGYGS-PETTTGGNALKFYASVRIDIRRIATLK 232
>gi|340759367|ref|ZP_08695939.1| recA [Fusobacterium varium ATCC 27725]
gi|251835562|gb|EES64102.1| recA [Fusobacterium varium ATCC 27725]
Length = 363
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/243 (47%), Positives = 166/243 (68%), Gaps = 9/243 (3%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLP 118
++ +K+ AL LA+ Q+ DFG+ S++ L G + VISTGS+ LD ALG+GG+P
Sbjct: 12 EVSEKEKALELAMKQIKKDFGEGSIMKL----GDNQEMNVEVISTGSINLDAALGLGGVP 67
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRIVEIYG E+SGKTT+ALH+ EAQK GG A++D E+ALDP A+A+G+D + LLI+
Sbjct: 68 RGRIVEIYGAESSGKTTIALHIAAEAQKTGGIVAFIDAEHALDPVYAKALGVDVDELLIS 127
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD E L + D L +SG++D+IVVDSVAAL+PK EI + Q+R+M++ALRK
Sbjct: 128 QPDYGEQALEIADMLVRSGAVDLIVVDSVAALVPKVEIDGEMGDQQMGLQARLMSKALRK 187
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ +L +S T ++F+NQ+R G G G T+GG ALKFY+++R+ + R K
Sbjct: 188 LTATLNKSKTTMVFINQIR-DKIGGFGFGPQT-TTTGGKALKFYSSVRMEVKRIGSVKQG 245
Query: 299 DKV 301
D+V
Sbjct: 246 DEV 248
>gi|359780396|ref|ZP_09283622.1| recombinase A [Pseudomonas psychrotolerans L19]
gi|359371708|gb|EHK72273.1| recombinase A [Pseudomonas psychrotolerans L19]
Length = 347
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/251 (49%), Positives = 168/251 (66%), Gaps = 13/251 (5%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGTVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKQGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNIL 304
++ L+IF+NQ+R K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRIGAVKEGDEV--- 236
Query: 305 EVVNIGSMIRL 315
IGS R+
Sbjct: 237 ----IGSETRV 243
>gi|429212390|ref|ZP_19203555.1| recombinase A [Pseudomonas sp. M1]
gi|428156872|gb|EKX03420.1| recombinase A [Pseudomonas sp. M1]
Length = 353
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/237 (50%), Positives = 163/237 (68%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQ+ G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQRQGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|262376180|ref|ZP_06069410.1| recA protein [Acinetobacter lwoffii SH145]
gi|262308781|gb|EEY89914.1| recA protein [Acinetobacter lwoffii SH145]
Length = 347
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 160/236 (67%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KNKALNAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I E QK GG CA++D E+ALDP A +G+D +NLL++QPD E
Sbjct: 64 YGPESSGKTTMTLQAIAECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL P+ EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDMIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|157374439|ref|YP_001473039.1| recombinase A [Shewanella sediminis HAW-EB3]
gi|189039610|sp|A8FST8.1|RECA_SHESH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|157316813|gb|ABV35911.1| Calcium-transporting ATPase [Shewanella sediminis HAW-EB3]
Length = 353
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 161/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL L Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KEKALNAVLGQIEKQFGKGSIMKL----GENRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLEVIAAAQREGKVCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L Q++T++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 LKQTNTMLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDRDEV 238
>gi|315453305|ref|YP_004073575.1| recombinase A [Helicobacter felis ATCC 49179]
gi|315132357|emb|CBY82985.1| recA protein [Helicobacter felis ATCC 49179]
Length = 337
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/242 (49%), Positives = 164/242 (67%), Gaps = 15/242 (6%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRI 122
QK AL LA+ Q+ FGK +++ R+ P+ STGSL LD+ALGIGG+P+GRI
Sbjct: 4 QKQKALDLAIRQIDKTFGKGALM---RWGDKEIEPIEATSTGSLGLDMALGIGGVPRGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG E+SGKTTL LHVI +AQK GG CA++D E+ALD A+ +G+D +NLLI+QPD+
Sbjct: 61 IEIYGPESSGKTTLTLHVIAQAQKEGGVCAFIDAEHALDVEYAKKLGVDVDNLLISQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L +++TL +SG++DVI VDSVAAL P+ EI + + Q+R+M+QALRKI
Sbjct: 121 GEEALEILETLARSGAVDVIAVDSVAALTPRAEIEGDMGDQHVGLQARLMSQALRKITGV 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMD----EVTSGGNALKFYAALRLRMMRTRLFKIA 298
L + +T +IF+NQ+R +G M E T+GGNALKFYA++RL + R K
Sbjct: 181 LHKMNTTLIFINQIRMK------IGMMGYGSPETTTGGNALKFYASVRLDIRRIATLKQN 234
Query: 299 DK 300
D+
Sbjct: 235 DQ 236
>gi|169633342|ref|YP_001707078.1| recombinase A [Acinetobacter baumannii SDF]
gi|169795694|ref|YP_001713487.1| recombinase A [Acinetobacter baumannii AYE]
gi|184158405|ref|YP_001846744.1| recombinase A [Acinetobacter baumannii ACICU]
gi|213158361|ref|YP_002319659.1| recombinase A [Acinetobacter baumannii AB0057]
gi|215483180|ref|YP_002325387.1| protein RecA [Acinetobacter baumannii AB307-0294]
gi|229577096|ref|YP_001084991.2| recombinase A [Acinetobacter baumannii ATCC 17978]
gi|239501635|ref|ZP_04660945.1| recombinase A [Acinetobacter baumannii AB900]
gi|260554756|ref|ZP_05826977.1| recA protein [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|301348114|ref|ZP_07228855.1| recombinase A [Acinetobacter baumannii AB056]
gi|301512103|ref|ZP_07237340.1| recombinase A [Acinetobacter baumannii AB058]
gi|301597370|ref|ZP_07242378.1| recombinase A [Acinetobacter baumannii AB059]
gi|332852512|ref|ZP_08434251.1| RecA protein [Acinetobacter baumannii 6013150]
gi|332871284|ref|ZP_08439833.1| RecA protein [Acinetobacter baumannii 6013113]
gi|332873896|ref|ZP_08441836.1| RecA protein [Acinetobacter baumannii 6014059]
gi|384132509|ref|YP_005515121.1| recA [Acinetobacter baumannii 1656-2]
gi|384143510|ref|YP_005526220.1| recombinase A [Acinetobacter baumannii MDR-ZJ06]
gi|385237835|ref|YP_005799174.1| recombinase A [Acinetobacter baumannii TCDC-AB0715]
gi|387123646|ref|YP_006289528.1| protein RecA [Acinetobacter baumannii MDR-TJ]
gi|407933108|ref|YP_006848751.1| recA [Acinetobacter baumannii TYTH-1]
gi|416148628|ref|ZP_11602455.1| recombinase A [Acinetobacter baumannii AB210]
gi|417549009|ref|ZP_12200089.1| RecA protein [Acinetobacter baumannii Naval-18]
gi|417553293|ref|ZP_12204363.1| RecA protein [Acinetobacter baumannii Naval-81]
gi|417562600|ref|ZP_12213479.1| RecA protein [Acinetobacter baumannii OIFC137]
gi|417567491|ref|ZP_12218363.1| RecA protein [Acinetobacter baumannii OIFC143]
gi|417568604|ref|ZP_12219467.1| RecA protein [Acinetobacter baumannii OIFC189]
gi|417572576|ref|ZP_12223430.1| RecA protein [Acinetobacter baumannii Canada BC-5]
gi|417578012|ref|ZP_12228849.1| RecA protein [Acinetobacter baumannii Naval-17]
gi|417871744|ref|ZP_12516671.1| recombinase A [Acinetobacter baumannii ABNIH1]
gi|417873723|ref|ZP_12518588.1| recombinase A [Acinetobacter baumannii ABNIH2]
gi|417882601|ref|ZP_12526890.1| recombinase A [Acinetobacter baumannii ABNIH4]
gi|421200286|ref|ZP_15657446.1| RecA protein [Acinetobacter baumannii OIFC109]
gi|421204120|ref|ZP_15661249.1| recombinase A [Acinetobacter baumannii AC12]
gi|421457340|ref|ZP_15906677.1| RecA protein [Acinetobacter baumannii IS-123]
gi|421534471|ref|ZP_15980744.1| recombinase A [Acinetobacter baumannii AC30]
gi|421621683|ref|ZP_16062598.1| RecA protein [Acinetobacter baumannii OIFC074]
gi|421627143|ref|ZP_16067956.1| RecA protein [Acinetobacter baumannii OIFC098]
gi|421630008|ref|ZP_16070723.1| RecA protein [Acinetobacter baumannii OIFC180]
gi|421633702|ref|ZP_16074331.1| RecA protein [Acinetobacter baumannii Naval-13]
gi|421644384|ref|ZP_16084868.1| RecA protein [Acinetobacter baumannii IS-235]
gi|421645926|ref|ZP_16086381.1| RecA protein [Acinetobacter baumannii IS-251]
gi|421651720|ref|ZP_16092087.1| RecA protein [Acinetobacter baumannii OIFC0162]
gi|421658484|ref|ZP_16098717.1| RecA protein [Acinetobacter baumannii Naval-83]
gi|421664217|ref|ZP_16104357.1| RecA protein [Acinetobacter baumannii OIFC110]
gi|421675545|ref|ZP_16115466.1| RecA protein [Acinetobacter baumannii OIFC065]
gi|421677010|ref|ZP_16116904.1| RecA protein [Acinetobacter baumannii OIFC111]
gi|421686624|ref|ZP_16126371.1| RecA protein [Acinetobacter baumannii IS-143]
gi|421691636|ref|ZP_16131295.1| RecA protein [Acinetobacter baumannii IS-116]
gi|421696007|ref|ZP_16135603.1| RecA protein [Acinetobacter baumannii WC-692]
gi|421698740|ref|ZP_16138279.1| RecA protein [Acinetobacter baumannii IS-58]
gi|421703881|ref|ZP_16143337.1| recombinase A [Acinetobacter baumannii ZWS1122]
gi|421707664|ref|ZP_16147055.1| recombinase A [Acinetobacter baumannii ZWS1219]
gi|421788299|ref|ZP_16224603.1| RecA protein [Acinetobacter baumannii Naval-82]
gi|421794625|ref|ZP_16230723.1| RecA protein [Acinetobacter baumannii Naval-2]
gi|421795586|ref|ZP_16231668.1| RecA protein [Acinetobacter baumannii Naval-21]
gi|421801278|ref|ZP_16237240.1| RecA protein [Acinetobacter baumannii Canada BC1]
gi|421804378|ref|ZP_16240288.1| RecA protein [Acinetobacter baumannii WC-A-694]
gi|424052069|ref|ZP_17789601.1| protein recA [Acinetobacter baumannii Ab11111]
gi|424059633|ref|ZP_17797124.1| protein recA [Acinetobacter baumannii Ab33333]
gi|424063571|ref|ZP_17801056.1| protein recA [Acinetobacter baumannii Ab44444]
gi|425748699|ref|ZP_18866683.1| RecA protein [Acinetobacter baumannii WC-348]
gi|425751868|ref|ZP_18869809.1| RecA protein [Acinetobacter baumannii Naval-113]
gi|445405220|ref|ZP_21431197.1| RecA protein [Acinetobacter baumannii Naval-57]
gi|445461237|ref|ZP_21448650.1| RecA protein [Acinetobacter baumannii OIFC047]
gi|445471296|ref|ZP_21452049.1| RecA protein [Acinetobacter baumannii OIFC338]
gi|445475945|ref|ZP_21453578.1| RecA protein [Acinetobacter baumannii Naval-78]
gi|445492094|ref|ZP_21460041.1| RecA protein [Acinetobacter baumannii AA-014]
gi|226737747|sp|B7H1V4.1|RECA_ACIB3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226737748|sp|B7I9U0.1|RECA_ACIB5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238685519|sp|A3M645.2|RECA_ACIBT RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238688039|sp|B0V6E0.1|RECA_ACIBY RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238688140|sp|B0VMV7.1|RECA_ACIBS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238691026|sp|B2I316.1|RECA_ACIBC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|169148621|emb|CAM86487.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Acinetobacter baumannii AYE]
gi|169152134|emb|CAP01033.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Acinetobacter baumannii]
gi|183209999|gb|ACC57397.1| RecA/RadA recombinase [Acinetobacter baumannii ACICU]
gi|193077556|gb|ABO12389.2| DNA strand exchange and recombination protein [Acinetobacter
baumannii ATCC 17978]
gi|213057521|gb|ACJ42423.1| DNA strand exchange and recombination protein RecA [Acinetobacter
baumannii AB0057]
gi|213987860|gb|ACJ58159.1| protein RecA [Acinetobacter baumannii AB307-0294]
gi|260411298|gb|EEX04595.1| recA protein [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|322508729|gb|ADX04183.1| recA [Acinetobacter baumannii 1656-2]
gi|323518334|gb|ADX92715.1| recombinase A [Acinetobacter baumannii TCDC-AB0715]
gi|332729214|gb|EGJ60557.1| RecA protein [Acinetobacter baumannii 6013150]
gi|332731568|gb|EGJ62854.1| RecA protein [Acinetobacter baumannii 6013113]
gi|332737882|gb|EGJ68769.1| RecA protein [Acinetobacter baumannii 6014059]
gi|333364897|gb|EGK46911.1| recombinase A [Acinetobacter baumannii AB210]
gi|342224582|gb|EGT89608.1| recombinase A [Acinetobacter baumannii ABNIH1]
gi|342230591|gb|EGT95422.1| recombinase A [Acinetobacter baumannii ABNIH2]
gi|342237454|gb|EGU01923.1| recombinase A [Acinetobacter baumannii ABNIH4]
gi|347594003|gb|AEP06724.1| recombinase A [Acinetobacter baumannii MDR-ZJ06]
gi|385878138|gb|AFI95233.1| protein RecA [Acinetobacter baumannii MDR-TJ]
gi|395525182|gb|EJG13271.1| RecA protein [Acinetobacter baumannii OIFC137]
gi|395553163|gb|EJG19171.1| RecA protein [Acinetobacter baumannii OIFC143]
gi|395554899|gb|EJG20901.1| RecA protein [Acinetobacter baumannii OIFC189]
gi|395563887|gb|EJG25539.1| RecA protein [Acinetobacter baumannii OIFC109]
gi|395568709|gb|EJG29379.1| RecA protein [Acinetobacter baumannii Naval-17]
gi|398326280|gb|EJN42429.1| recombinase A [Acinetobacter baumannii AC12]
gi|400207064|gb|EJO38035.1| RecA protein [Acinetobacter baumannii IS-123]
gi|400208144|gb|EJO39114.1| RecA protein [Acinetobacter baumannii Canada BC-5]
gi|400386977|gb|EJP50050.1| RecA protein [Acinetobacter baumannii Naval-18]
gi|400393552|gb|EJP60598.1| RecA protein [Acinetobacter baumannii Naval-81]
gi|404562245|gb|EKA67469.1| RecA protein [Acinetobacter baumannii IS-116]
gi|404563990|gb|EKA69184.1| RecA protein [Acinetobacter baumannii WC-692]
gi|404567731|gb|EKA72848.1| RecA protein [Acinetobacter baumannii IS-143]
gi|404572059|gb|EKA77104.1| RecA protein [Acinetobacter baumannii IS-58]
gi|404664575|gb|EKB32553.1| protein recA [Acinetobacter baumannii Ab11111]
gi|404670371|gb|EKB38263.1| protein recA [Acinetobacter baumannii Ab33333]
gi|404674163|gb|EKB41923.1| protein recA [Acinetobacter baumannii Ab44444]
gi|407191431|gb|EKE62632.1| recombinase A [Acinetobacter baumannii ZWS1122]
gi|407191770|gb|EKE62960.1| recombinase A [Acinetobacter baumannii ZWS1219]
gi|407901689|gb|AFU38520.1| recA [Acinetobacter baumannii TYTH-1]
gi|408505709|gb|EKK07429.1| RecA protein [Acinetobacter baumannii IS-235]
gi|408507653|gb|EKK09347.1| RecA protein [Acinetobacter baumannii OIFC0162]
gi|408517919|gb|EKK19454.1| RecA protein [Acinetobacter baumannii IS-251]
gi|408693522|gb|EKL39125.1| RecA protein [Acinetobacter baumannii OIFC098]
gi|408697280|gb|EKL42795.1| RecA protein [Acinetobacter baumannii OIFC074]
gi|408699357|gb|EKL44837.1| RecA protein [Acinetobacter baumannii OIFC180]
gi|408706232|gb|EKL51556.1| RecA protein [Acinetobacter baumannii Naval-13]
gi|408709918|gb|EKL55157.1| RecA protein [Acinetobacter baumannii Naval-83]
gi|408712514|gb|EKL57697.1| RecA protein [Acinetobacter baumannii OIFC110]
gi|409987676|gb|EKO43856.1| recombinase A [Acinetobacter baumannii AC30]
gi|410382476|gb|EKP35030.1| RecA protein [Acinetobacter baumannii OIFC065]
gi|410393667|gb|EKP46019.1| RecA protein [Acinetobacter baumannii OIFC111]
gi|410394243|gb|EKP46581.1| RecA protein [Acinetobacter baumannii Naval-2]
gi|410401536|gb|EKP53676.1| RecA protein [Acinetobacter baumannii Naval-21]
gi|410403507|gb|EKP55599.1| RecA protein [Acinetobacter baumannii Naval-82]
gi|410405932|gb|EKP57966.1| RecA protein [Acinetobacter baumannii Canada BC1]
gi|410411749|gb|EKP63618.1| RecA protein [Acinetobacter baumannii WC-A-694]
gi|425490744|gb|EKU57039.1| RecA protein [Acinetobacter baumannii WC-348]
gi|425499624|gb|EKU65656.1| RecA protein [Acinetobacter baumannii Naval-113]
gi|444763333|gb|ELW87669.1| RecA protein [Acinetobacter baumannii AA-014]
gi|444771731|gb|ELW95856.1| RecA protein [Acinetobacter baumannii OIFC047]
gi|444772036|gb|ELW96160.1| RecA protein [Acinetobacter baumannii OIFC338]
gi|444778489|gb|ELX02501.1| RecA protein [Acinetobacter baumannii Naval-78]
gi|444781970|gb|ELX05881.1| RecA protein [Acinetobacter baumannii Naval-57]
gi|452952511|gb|EME57942.1| recombinase A [Acinetobacter baumannii MSP4-16]
Length = 349
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 161/236 (68%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|403675541|ref|ZP_10937703.1| recombinase A [Acinetobacter sp. NCTC 10304]
gi|417545549|ref|ZP_12196635.1| RecA protein [Acinetobacter baumannii OIFC032]
gi|421667199|ref|ZP_16107274.1| RecA protein [Acinetobacter baumannii OIFC087]
gi|421669367|ref|ZP_16109391.1| RecA protein [Acinetobacter baumannii OIFC099]
gi|421808262|ref|ZP_16244113.1| RecA protein [Acinetobacter baumannii OIFC035]
gi|400383437|gb|EJP42115.1| RecA protein [Acinetobacter baumannii OIFC032]
gi|410385545|gb|EKP38036.1| RecA protein [Acinetobacter baumannii OIFC087]
gi|410388759|gb|EKP41187.1| RecA protein [Acinetobacter baumannii OIFC099]
gi|410415842|gb|EKP67623.1| RecA protein [Acinetobacter baumannii OIFC035]
Length = 349
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 161/236 (68%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|371782149|emb|CCE46141.1| recombinase A, partial [Agrobacterium tumefaciens]
Length = 246
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 152/218 (69%), Gaps = 3/218 (1%)
Query: 74 LSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGK 133
LSQ+ FGK S++ L +STGSL LD+ALGIGGLP+GRIVEIYG E+SGK
Sbjct: 1 LSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPRGRIVEIYGPESSGK 60
Query: 134 TTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTL 193
TTLAL I E QK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E L + DTL
Sbjct: 61 TTLALQTIAECQKKGGICAFVDAEHALDPIYARKLGVDLQNLLISQPDTGEQALEITDTL 120
Query: 194 TKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFL 253
+SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S ++IF+
Sbjct: 121 VRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSKCMVIFI 180
Query: 254 NQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 181 NQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 215
>gi|146328886|ref|YP_001209208.1| DNA recombination protein RecA [Dichelobacter nodosus VCS1703A]
gi|166220643|sp|A5EW90.1|RECA_DICNV RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|146232356|gb|ABQ13334.1| DNA recombination protein RecA [Dichelobacter nodosus VCS1703A]
Length = 350
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 161/237 (67%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
++ AL L+QL FGK +++ L + ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 4 EQKKALTAVLTQLDKQFGKGTVMRLGEQVAAHDIQAISTGSLTLDIALGIGGLPKGRIVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTT+ LHVI EAQK GG A++D E+ALDP A +G++ ++L + QPD+ E
Sbjct: 64 IYGPESSGKTTMMLHVIAEAQKNGGTAAFIDAEHALDPIYARKLGVNTDDLYVTQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG+ DVIVVDSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEICDALVRSGAFDVIVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIK 183
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+++TL++F+NQ+R K G G E T+GGNALKFYA++R+ + R K D+V
Sbjct: 184 RANTLVVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRMDIRRIGSIKEGDEV 237
>gi|419850084|ref|ZP_14373100.1| RecA protein [Bifidobacterium longum subsp. longum 35B]
gi|419853863|ref|ZP_14376663.1| RecA protein [Bifidobacterium longum subsp. longum 2-2B]
gi|386406437|gb|EIJ21444.1| RecA protein [Bifidobacterium longum subsp. longum 2-2B]
gi|386410139|gb|EIJ24941.1| RecA protein [Bifidobacterium longum subsp. longum 35B]
Length = 418
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/256 (48%), Positives = 170/256 (66%), Gaps = 7/256 (2%)
Query: 45 SSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTG 104
+ A+ P +D+ D K + AL AL+Q+ FGK S + L + VI TG
Sbjct: 26 TKPAKDPAAEDKHELDPK---RKAALDTALAQVEKSFGKGSAMRLGDQ-PEQNVEVIPTG 81
Query: 105 SLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSL 164
SL LD+ALGIGGLPKGRIVEIYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+
Sbjct: 82 SLALDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAY 141
Query: 165 AEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMY 224
A +G+D ++L+++QPD+ E L + D L +SG++D+IV+DSVAAL+PK EI + +
Sbjct: 142 ARKLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDIIVIDSVAALVPKAEIEGEMGDSH 201
Query: 225 SDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAA 284
Q+R+M+QALRK+ +L Q+ T IF+NQ+R K G G E T+GG ALKFYA+
Sbjct: 202 VGLQARLMSQALRKMTGALAQAGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYAS 258
Query: 285 LRLRMMRTRLFKIADK 300
+RL + R + K D+
Sbjct: 259 VRLDIRRIQTLKNGDE 274
>gi|296393357|ref|YP_003658241.1| recA protein [Segniliparus rotundus DSM 44985]
gi|296180504|gb|ADG97410.1| recA protein [Segniliparus rotundus DSM 44985]
Length = 346
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 162/236 (68%), Gaps = 4/236 (1%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKG 120
A+ + ++ AL LALSQ+ FGK S++ L S+ VI TGS+ LD+ALGIGGLPKG
Sbjct: 2 AQALDRNKALELALSQIDKSFGKGSVMRLGDQ-ASQPIAVIPTGSIALDVALGIGGLPKG 60
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
R++EIYG E+SGKTT+ALH + AQ GG A++D E+ALDP A+ +G+D ENLL++QP
Sbjct: 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTENLLVSQP 120
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + D L +SG++D+IV+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 121 DTGEQALEIADMLIRSGALDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMT 180
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+L S T IF+NQ+R K G G E T+GG ALKFYA++RL + R K
Sbjct: 181 GALNNSGTTAIFINQLR--EKIGVMFGPT-ETTTGGKALKFYASVRLDVRRIETLK 233
>gi|258545021|ref|ZP_05705255.1| recombinase A [Cardiobacterium hominis ATCC 15826]
gi|258519719|gb|EEV88578.1| recombinase A [Cardiobacterium hominis ATCC 15826]
Length = 363
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/237 (49%), Positives = 161/237 (67%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+++ AL+ L+QL FGK +++ L ISTGSL LD+ALGIGGLP+GRIVE
Sbjct: 8 EQEKALKAVLAQLDKQFGKGTVMRLGDQTTEHDIQAISTGSLGLDIALGIGGLPRGRIVE 67
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LHVI EAQK GG A++D E+ALDP A +G++ ++L I QPD+ E
Sbjct: 68 IYGPESSGKTTLTLHVIAEAQKAGGTAAFIDAEHALDPIYARKLGVNTDDLYITQPDTGE 127
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG+ VIV+DSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 128 QALEIADALVRSGAFSVIVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIK 187
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 188 RANTLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKEGDEV 241
>gi|421653964|ref|ZP_16094295.1| RecA protein [Acinetobacter baumannii Naval-72]
gi|408511814|gb|EKK13461.1| RecA protein [Acinetobacter baumannii Naval-72]
Length = 349
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 161/236 (68%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|417942042|ref|ZP_12585319.1| Protein RecA (Recombinase A) [Bifidobacterium breve CECT 7263]
gi|376167427|gb|EHS86263.1| Protein RecA (Recombinase A) [Bifidobacterium breve CECT 7263]
Length = 416
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 163/236 (69%), Gaps = 4/236 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
++ AL AL+Q+ +FGK S + L + VI TGSL LD+ALGIGGLPKGRIVE
Sbjct: 44 KRKAALDTALAQVEKNFGKGSAMRLGDQ-PVQNVEVIPTGSLALDMALGIGGLPKGRIVE 102
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+ A +G+D ++L+++QPD+ E
Sbjct: 103 IYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGE 162
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+ +L
Sbjct: 163 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 222
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
Q+ T IF+NQ+R K G G E T+GG ALKFYA++RL + R + K D+
Sbjct: 223 QAGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYASVRLDIRRIQTLKNGDE 275
>gi|254292634|ref|YP_003058657.1| recA protein [Hirschia baltica ATCC 49814]
gi|254041165|gb|ACT57960.1| recA protein [Hirschia baltica ATCC 49814]
Length = 364
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 162/238 (68%), Gaps = 4/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL Q+ +FGK S++ L S +STGSL LD+ALGIGGLPKGRI+
Sbjct: 14 MDKQKALETALGQIERNFGKGSIMRLGDN-ASMDVEAVSTGSLSLDIALGIGGLPKGRII 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A +G+D +LL++QPD+
Sbjct: 73 EIYGPESSGKTTLALHCIAEAQKNGGVAAFVDAEHALDPIYAGKLGVDLGDLLVSQPDTG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 133 EQSLEIADTLVRSGAVDVLVIDSVAALTPRAELEGEMGDSLPGLQARLMSQALRKLTGSI 192
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S ++IF+NQ+R K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 193 SKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGALKDRDEV 247
>gi|417877996|ref|ZP_12522634.1| recombinase A [Acinetobacter baumannii ABNIH3]
gi|342233972|gb|EGT98668.1| recombinase A [Acinetobacter baumannii ABNIH3]
Length = 349
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 161/236 (68%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRI--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|262038532|ref|ZP_06011901.1| protein RecA [Leptotrichia goodfellowii F0264]
gi|261747401|gb|EEY34871.1| protein RecA [Leptotrichia goodfellowii F0264]
Length = 382
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/254 (47%), Positives = 173/254 (68%), Gaps = 16/254 (6%)
Query: 56 EPHDDAKIM-QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLAL 112
E DD K+ +K+ L LAL+Q+ +FG+ S++ L +++ V ISTGS+ LD+AL
Sbjct: 8 EEKDDNKVQSEKERVLNLALTQIQKEFGEGSIMKLGE---NQKMNVKSISTGSINLDMAL 64
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
GIGG+P+GRI+EIYG E+SGKTTLALHVI EAQK GG A++D E+ALDP A+A+G++
Sbjct: 65 GIGGVPRGRIIEIYGAESSGKTTLALHVIAEAQKEGGVAAFIDAEHALDPVYAKALGVNI 124
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
+ LLI+QPD+ E L + D L +SG++DVIVVDSVAAL+PK EI + Q+R+M
Sbjct: 125 DELLISQPDTGEQALEIADMLVRSGAMDVIVVDSVAALVPKAEIEGEMGDQQMGLQARLM 184
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVR-----FSAKSGQGLGRMDEVTSGGNALKFYAALRL 287
++ALRK+ ++ +S T++IF+NQ+R FS G TSGG ALKF++ +R+
Sbjct: 185 SKALRKLTANISKSSTVMIFINQIREKIGGFSFTPGP-----QTTTSGGRALKFFSTVRM 239
Query: 288 RMMRTRLFKIADKV 301
+ R K ++V
Sbjct: 240 EVKRVGSVKQGEEV 253
>gi|148887233|emb|CAM12783.1| recombinase A [Ochrobactrum pseudogrignonense]
Length = 267
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/201 (56%), Positives = 147/201 (73%), Gaps = 3/201 (1%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLPKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+AL
Sbjct: 8 VPTGSLSLDIALGVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHAL 67
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 68 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 127
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALK 280
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+R K G G E T+GGNALK
Sbjct: 128 GDSLPGLQARLMSQALRKLTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALK 184
Query: 281 FYAALRLRMMRTRLFKIADKV 301
FYA++RL + R K D+V
Sbjct: 185 FYASVRLDIRRIGSIKERDEV 205
>gi|259419113|ref|ZP_05743030.1| protein RecA [Silicibacter sp. TrichCH4B]
gi|259345335|gb|EEW57189.1| protein RecA [Silicibacter sp. TrichCH4B]
Length = 357
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/244 (48%), Positives = 162/244 (66%), Gaps = 3/244 (1%)
Query: 58 HDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGL 117
DD K K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGL
Sbjct: 8 KDDKKSGDKQKALDSALAQIERQFGKGSIMKLGDGTALQEIEASSTGSLGLDIALGIGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
P GRIVEIYG E+SGKTTL LH I E QK GG CA++D E+ALDP A+ +G+D + LLI
Sbjct: 68 PMGRIVEIYGPESSGKTTLTLHCIAEQQKKGGVCAFVDAEHALDPQYAKKLGVDLDELLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG++++++VDSVAAL PK E+ + Q+R+M+QA+R
Sbjct: 128 SQPDTGEQALEITDTLVRSGAVNMVIVDSVAALTPKSELEGDMGDSNVGVQARLMSQAMR 187
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKI 297
K+ S+ +S ++IF+NQ+R K G G E T+GGNALKFY+++RL + R K
Sbjct: 188 KLTGSISRSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGSIKD 244
Query: 298 ADKV 301
D+V
Sbjct: 245 RDEV 248
>gi|99081071|ref|YP_613225.1| recombinase A [Ruegeria sp. TM1040]
gi|99037351|gb|ABF63963.1| recA protein [Ruegeria sp. TM1040]
Length = 357
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/244 (48%), Positives = 162/244 (66%), Gaps = 3/244 (1%)
Query: 58 HDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGL 117
DD K K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGL
Sbjct: 8 KDDKKSGDKQKALDSALAQIERQFGKGSIMKLGDGTALQEIEASSTGSLGLDIALGIGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
P GRIVEIYG E+SGKTTL LH I E QK GG CA++D E+ALDP A+ +G+D + LLI
Sbjct: 68 PMGRIVEIYGPESSGKTTLTLHCIAEQQKKGGVCAFVDAEHALDPQYAKKLGVDLDELLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG++++++VDSVAAL PK E+ + Q+R+M+QA+R
Sbjct: 128 SQPDTGEQALEITDTLVRSGAVNMVIVDSVAALTPKSELEGDMGDSNVGVQARLMSQAMR 187
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKI 297
K+ S+ +S ++IF+NQ+R K G G E T+GGNALKFY+++RL + R K
Sbjct: 188 KLTGSISRSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGSIKD 244
Query: 298 ADKV 301
D+V
Sbjct: 245 RDEV 248
>gi|406036320|ref|ZP_11043684.1| recombinase A [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 348
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 161/236 (68%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KNKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKNGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|262370234|ref|ZP_06063560.1| recombinase A [Acinetobacter johnsonii SH046]
gi|381196442|ref|ZP_09903784.1| recombinase A [Acinetobacter lwoffii WJ10621]
gi|262314576|gb|EEY95617.1| recombinase A [Acinetobacter johnsonii SH046]
Length = 347
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 159/236 (67%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALNAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I E QK GG CA++D E+ALDP A +G+D +NLL++QPD E
Sbjct: 64 YGPESSGKTTMTLQAIAECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL P+ EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRVGQVKEGDEI 236
>gi|340751351|ref|ZP_08688172.1| recA [Fusobacterium mortiferum ATCC 9817]
gi|229421667|gb|EEO36714.1| recA [Fusobacterium mortiferum ATCC 9817]
Length = 359
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/242 (47%), Positives = 166/242 (68%), Gaps = 9/242 (3%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLP 118
++ ++ AL +A+ Q+ DFG+ S++ L GS + ISTGS+ LDLALG GG+P
Sbjct: 7 EVNDREKALEMAMKQIKKDFGEGSIMKL----GSNQSMAVETISTGSINLDLALGQGGVP 62
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRIVEIYG E+SGKTT+ALH+ EAQK+GG A++D E+ALDP A+A+G+D + LLI+
Sbjct: 63 RGRIVEIYGAESSGKTTIALHIAAEAQKMGGIVAFIDAEHALDPVYAKALGVDVDELLIS 122
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD E L + D L +SG++D++VVDSVAAL+PK EI ++ Q+R+M++ALRK
Sbjct: 123 QPDYGEQALEIADMLVRSGAVDLVVVDSVAALVPKAEIDGEMSDQQMGLQARLMSKALRK 182
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ +L +S T +IF+NQ+R G G G T+GG ALKFYA++R+ + R K
Sbjct: 183 LTATLNKSKTTMIFINQIR-DKIGGFGFGPQT-TTTGGKALKFYASVRMEVKRVGSVKQG 240
Query: 299 DK 300
D+
Sbjct: 241 DE 242
>gi|260554248|ref|ZP_05826501.1| RecA/RadA recombinase [Acinetobacter sp. RUH2624]
gi|424055351|ref|ZP_17792874.1| protein recA [Acinetobacter nosocomialis Ab22222]
gi|425741964|ref|ZP_18860089.1| RecA protein [Acinetobacter baumannii WC-487]
gi|260404628|gb|EEW98145.1| RecA/RadA recombinase [Acinetobacter sp. RUH2624]
gi|407438546|gb|EKF45089.1| protein recA [Acinetobacter nosocomialis Ab22222]
gi|425489173|gb|EKU55486.1| RecA protein [Acinetobacter baumannii WC-487]
Length = 350
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 161/236 (68%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|445431866|ref|ZP_21438919.1| RecA protein [Acinetobacter baumannii OIFC021]
gi|444759249|gb|ELW83725.1| RecA protein [Acinetobacter baumannii OIFC021]
Length = 350
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 161/236 (68%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|365131217|ref|ZP_09341784.1| protein RecA [Subdoligranulum sp. 4_3_54A2FAA]
gi|363618883|gb|EHL70220.1| protein RecA [Subdoligranulum sp. 4_3_54A2FAA]
Length = 392
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/231 (49%), Positives = 167/231 (72%), Gaps = 4/231 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K +AL AL+Q+ FGK +++ L + + + ISTGS+ LD+ALGIGGLP+GRIVEI
Sbjct: 17 KKSALETALAQIEKQFGKGAVMKLGQNV-TMQVDAISTGSISLDMALGIGGLPRGRIVEI 75
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG EASGKTTLALH I EAQK GG A++DVE+ALDP A+A+G+D ++LL++QPD+ E
Sbjct: 76 YGPEASGKTTLALHCIAEAQKGGGEVAFIDVEHALDPVYAKALGVDIDSLLVSQPDTGEQ 135
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG+ID +VVDSVAA++P+ EI + + Q+R+M+QA+RK+ + +
Sbjct: 136 ALEICEALVRSGAIDCVVVDSVAAMVPRAEIEGEMGDAHVGLQARLMSQAMRKLTGIIGK 195
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+ T++IF+NQ+R K G G EVT+GGNALK+Y+++R+ + RT K
Sbjct: 196 TGTVVIFINQLRL--KVGIVYGN-PEVTAGGNALKYYSSVRIDVRRTEQLK 243
>gi|389711178|ref|ZP_10186989.1| recombinase A [Acinetobacter sp. HA]
gi|388610030|gb|EIM39167.1| recombinase A [Acinetobacter sp. HA]
Length = 347
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 160/236 (67%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KNKALNAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I E QK GG CA++D E+ALDP A +G+D +NLL++QPD E
Sbjct: 64 YGPESSGKTTMTLQAIAECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL P+ EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|150390420|ref|YP_001320469.1| recA protein [Alkaliphilus metalliredigens QYMF]
gi|149950282|gb|ABR48810.1| recA protein [Alkaliphilus metalliredigens QYMF]
Length = 347
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/234 (50%), Positives = 165/234 (70%), Gaps = 6/234 (2%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRI 122
M+K AL +A+SQ+ FGK S++ L S+ ISTGS+ LD+A+GIGG+P+GR+
Sbjct: 1 MEKKKALDVAISQIEKQFGKGSIMKLGE--DSKLSLECISTGSIDLDVAIGIGGVPRGRV 58
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTT++LH+I EAQK GG A++D E+ALDP A +G+D ENL+++QPD+
Sbjct: 59 VEIYGPESSGKTTVSLHIIAEAQKNGGSAAFIDAEHALDPIYARKLGVDTENLIVSQPDT 118
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG+IDVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ S
Sbjct: 119 GEQALEIAEALVRSGAIDVIVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGS 178
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+ +S+T IF+NQ+R K G G E T+GG ALKFYA++RL + R + K
Sbjct: 179 INKSNTTAIFINQLR--EKIGVMFGN-PETTTGGRALKFYASVRLDVRRIDVIK 229
>gi|403054210|ref|ZP_10908694.1| recombinase A [Acinetobacter bereziniae LMG 1003]
gi|445426086|ref|ZP_21437512.1| RecA protein [Acinetobacter sp. WC-743]
gi|444753039|gb|ELW77708.1| RecA protein [Acinetobacter sp. WC-743]
Length = 347
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 160/236 (67%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALNAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|121606843|ref|YP_984172.1| recombination protein RecA [Polaromonas naphthalenivorans CJ2]
gi|254790441|sp|A1VUC3.1|RECA_POLNA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|120595812|gb|ABM39251.1| recA protein [Polaromonas naphthalenivorans CJ2]
Length = 384
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/237 (48%), Positives = 166/237 (70%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL +AL+Q+ FGK +++ L V+STGSL LD+ALG+GGLP+GR+VE
Sbjct: 14 EKARALAVALAQIEKQFGKGTIMKLGAGEVIEDIQVVSTGSLGLDIALGVGGLPRGRVVE 73
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI E QK+GG CA++D E+ALD A+ +G++ + LLI+QPD+ E
Sbjct: 74 IYGPESSGKTTLTLQVIAEMQKIGGTCAFVDAEHALDIQYAQKLGVNLQELLISQPDTGE 133
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L +VD+LT+SG++D+IV+DSVAAL PK E+ + Q+R+M+QALRK+ ++
Sbjct: 134 QALEIVDSLTRSGAVDLIVIDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTATIK 193
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+++ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 KANCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKKGDEV 247
>gi|84686865|ref|ZP_01014749.1| recombinase A [Maritimibacter alkaliphilus HTCC2654]
gi|84665062|gb|EAQ11542.1| recombinase A [Rhodobacterales bacterium HTCC2654]
Length = 361
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 162/237 (68%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL AL+Q+ FGK S++ L STGSL LD+ALGIGGLPKGRI+E
Sbjct: 19 EKQKALDSALAQIERQFGKGSIMKLGADNPVAEIASTSTGSLGLDIALGIGGLPKGRIIE 78
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LH + E QK GG CA++D E+ALDP A+ +G+D + LLI+QPD+ E
Sbjct: 79 IYGPESSGKTTLTLHCVAEEQKKGGVCAFVDAEHALDPQYAKRLGVDLDELLISQPDTGE 138
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L +VDTL +SG+++++VVDSVAAL PK E+ + Q+R+M+QA+RK+ S+
Sbjct: 139 QALEIVDTLVRSGAVNMVVVDSVAALTPKSELEGDMGDSSVGVQARLMSQAMRKLTGSIA 198
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 199 RSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGAIKDRDEV 252
>gi|71279561|ref|YP_270789.1| recA protein [Colwellia psychrerythraea 34H]
gi|123760965|sp|Q47WN3.1|RECA_COLP3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|71145301|gb|AAZ25774.1| recA protein [Colwellia psychrerythraea 34H]
Length = 345
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/236 (51%), Positives = 164/236 (69%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL AL+Q+ FGK S++ L + ISTGSL LD+ALG GGLP GR+VEI
Sbjct: 5 KEKALSAALAQIERQFGKGSIMKLGDNT-TMDVETISTGSLGLDIALGAGGLPMGRVVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI EAQ+ G CA++D E+ALDP AE +G++ + LLI+QPD+ E
Sbjct: 64 YGPESSGKTTLTLEVIAEAQRNGKVCAFIDAEHALDPVYAEKLGVNIDELLISQPDTGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L +VD LT+SG+IDVIVVDSVAAL PK EI + + Q+R+++QA+RK+ +L +
Sbjct: 124 ALEIVDMLTRSGAIDVIVVDSVAALTPKAEIEGDMGDSHMGLQARMLSQAMRKLTGNLKK 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNTMLIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKNGDEI 236
>gi|149688786|gb|ABR27804.1| RecA [Candidatus Pelagibacter ubique]
gi|149688788|gb|ABR27805.1| RecA [Candidatus Pelagibacter ubique]
gi|149688792|gb|ABR27807.1| RecA [Candidatus Pelagibacter ubique]
gi|149688796|gb|ABR27809.1| RecA [Candidatus Pelagibacter ubique]
Length = 289
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/212 (54%), Positives = 151/212 (71%), Gaps = 6/212 (2%)
Query: 93 FGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGG 149
G RR ISTGSL LD+ALGIGGLPKGR++E+YG E+SGKTTLAL V+ EAQK GG
Sbjct: 7 LGQRRAMDVESISTGSLSLDVALGIGGLPKGRVIEVYGPESSGKTTLALQVLAEAQKAGG 66
Query: 150 YCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAA 209
CA++D E+ALDP A+ +G+D E LLI+QPD+ E L + DTL KSGSI VIV+DSVAA
Sbjct: 67 ICAFIDAEHALDPIYAKKLGVDTEELLISQPDTGEQALEIADTLVKSGSISVIVIDSVAA 126
Query: 210 LIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRM 269
L P+ EI + + QSR+M+QALRK+ S+ ++T++IF+NQ+R K G G
Sbjct: 127 LTPRAEIEGEMGDHHVGLQSRLMSQALRKLTGSISSTNTMMIFINQIRM--KIGVMFGS- 183
Query: 270 DEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
E TSGGNALKFY+++R+ + R K D++
Sbjct: 184 PETTSGGNALKFYSSVRMDIRRIGAIKNGDEI 215
>gi|356545731|ref|XP_003541289.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein recA homolog 3,
mitochondrial-like [Glycine max]
Length = 442
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/297 (44%), Positives = 183/297 (61%), Gaps = 22/297 (7%)
Query: 5 LQPFRFSSIAPRRFFSLFPSFSQNGRRDAITCIGMNIHSLSSAAEVPEFDDEPHDDAKIM 64
LQ F+ I + S FS GRR + + D D+ +
Sbjct: 43 LQGFKLGIIGTSQILS----FSSKGRRRSKS------------------DGSDSDEENMS 80
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K+ AL+ AL Q+ + FG S++ L R + PV+STGS LD+AL IGGLP G +VE
Sbjct: 81 KKELALQQALDQITSAFGNGSIMWLGRSVSPKSLPVVSTGSFALDVALVIGGLPXGHVVE 140
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG EAS KT LALHVI EAQK GGYC ++D E+ALD LAE++G++ NLL++QPD E
Sbjct: 141 IYGPEASVKTILALHVIAEAQKQGGYCVFVDAEHALDKKLAESIGVNTTNLLLSQPDCGE 200
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
LS+VDTL +SGS+DVIVVDSVAAL+PK E+ + + Q+R+M+QALRK+ ++L
Sbjct: 201 QALSLVDTLIRSGSVDVIVVDSVAALVPKGELDGEMGHAHMAMQARLMSQALRKLSHALS 260
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S ++IF+NQVR + + G E T GGN LKFYA++RL + R K +++
Sbjct: 261 PSQCILIFINQVRSNISTFGGFSGPTEXTCGGNTLKFYASVRLNIKRIGFVKKGEEI 317
>gi|308187886|ref|YP_003932017.1| protein recA (Recombinase A) [Pantoea vagans C9-1]
gi|308058396|gb|ADO10568.1| Protein recA (Recombinase A) [Pantoea vagans C9-1]
Length = 356
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 158/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D ENLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIASAQRKGKTCAFIDAEHALDPVYAKKLGVDIENLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKEGDNV 238
>gi|262372265|ref|ZP_06065544.1| recA protein [Acinetobacter junii SH205]
gi|262312290|gb|EEY93375.1| recA protein [Acinetobacter junii SH205]
Length = 348
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 161/236 (68%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKNGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|227824639|ref|ZP_03989471.1| recA protein [Acidaminococcus sp. D21]
gi|226905138|gb|EEH91056.1| recA protein [Acidaminococcus sp. D21]
Length = 352
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/237 (47%), Positives = 159/237 (67%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL A+ Q+ DFGK S++ L I TG+L LD+ALG+GG+P+GRI+E
Sbjct: 4 EKGKALDAAVKQIEKDFGKGSIMKLGAASAKMNIETIPTGALSLDIALGVGGIPRGRIIE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTT+ALH+I EAQK GGY A++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 64 IYGPESSGKTTVALHMIAEAQKRGGYAAFIDAEHALDPEYARHLGVDIDNLLISQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG+ID+IV+DSVAAL+PK EI + + Q+R+M+QALRK+ +
Sbjct: 124 QALEICDALVRSGAIDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTGIIS 183
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S T +F+NQ+R K G G E T+GG ALKFY+ +R+ + R K + +
Sbjct: 184 KSRTATVFINQIR--EKVGVMFGN-PETTTGGRALKFYSTVRMDVRRIESLKSGNDI 237
>gi|386286543|ref|ZP_10063731.1| recombinase A [gamma proteobacterium BDW918]
gi|385280340|gb|EIF44264.1| recombinase A [gamma proteobacterium BDW918]
Length = 344
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 163/237 (68%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRR-GPVISTGSLKLDLALGIGGLPKGRIVE 124
K AL ALSQ+ FGK S++ + SR P +STGSL LD+ALGIGGLP GRIVE
Sbjct: 5 KQKALESALSQIERQFGKGSIMKMGD--SSREVMPSVSTGSLGLDIALGIGGLPYGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L V+ EAQK G A +D E+ALDP AE +G++ E+LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLCLQVMAEAQKAGKTVAIVDAEHALDPQYAEKLGVNLEDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SGS+DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+ ++
Sbjct: 123 QALEITDMLVRSGSVDVIVIDSVAALVPKAEIEGEMGDTHVGLQARLMSQALRKLTGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E TSGGN+LKFYA++RL + RT K ++V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGN-PETTSGGNSLKFYASVRLDIRRTGAVKDGEEV 236
>gi|163746279|ref|ZP_02153637.1| recombinase A [Oceanibulbus indolifex HEL-45]
gi|161380164|gb|EDQ04575.1| recombinase A [Oceanibulbus indolifex HEL-45]
Length = 356
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/243 (47%), Positives = 163/243 (67%), Gaps = 3/243 (1%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D K +K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGLP
Sbjct: 10 DSKKTAEKQKALDSALAQIERQFGKGSIMKLGAEGAVQDIRASSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
GRI+EIYG E+SGKTTL LH + E QK GG CA++D E+ALDP A+ +G+D + LLI+
Sbjct: 70 MGRIIEIYGPESSGKTTLTLHCVAEQQKAGGVCAFVDAEHALDPQYAKKLGVDIDELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG++++++VDSVAAL PK E+ + Q+R+M+QA+RK
Sbjct: 130 QPDTGEQALEITDTLVRSGAVNMVIVDSVAALTPKSELEGEMGDSSVGVQARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFY+++RL + R K
Sbjct: 190 LTGSISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGALKDR 246
Query: 299 DKV 301
D+V
Sbjct: 247 DEV 249
>gi|442805655|ref|YP_007373804.1| protein RecA [Clostridium stercorarium subsp. stercorarium DSM
8532]
gi|442741505|gb|AGC69194.1| protein RecA [Clostridium stercorarium subsp. stercorarium DSM
8532]
Length = 345
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/232 (49%), Positives = 160/232 (68%), Gaps = 4/232 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL + SQ+ FGK +++ L VI TG+L LD+ALG+GGLP+GRIVE
Sbjct: 5 EKKKALEMVFSQIEKQFGKGAIMKLGEA-AHMNIDVIPTGALGLDIALGVGGLPRGRIVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
I+G E+SGKTT+ALHVI EAQK GG A++D E+ALDP A+A+G++ ENL+++QPD+ E
Sbjct: 64 IFGPESSGKTTVALHVIAEAQKAGGEAAFIDAEHALDPVYAKALGVNIENLIVSQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + + L +SG+IDVIV+DSVAAL+PK EI + Y Q+R+M+QALRK+ +
Sbjct: 124 QALEIAEALVRSGAIDVIVIDSVAALVPKAEIDGEMGEQYVGLQARLMSQALRKLSGVIS 183
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+S T+ IF+NQ+R K G G EVT GG ALKFYA++R+ + + K
Sbjct: 184 KSRTVAIFINQLR--EKVGVMFGN-PEVTPGGRALKFYASIRMDVRKVETLK 232
>gi|149688800|gb|ABR27811.1| RecA [Candidatus Pelagibacter ubique]
Length = 289
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/212 (54%), Positives = 151/212 (71%), Gaps = 6/212 (2%)
Query: 93 FGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGG 149
G RR ISTGSL LD+ALGIGGLPKGR++E+YG E+SGKTTLAL V+ EAQK GG
Sbjct: 7 LGQRRAMDVESISTGSLSLDVALGIGGLPKGRVIEVYGPESSGKTTLALQVLAEAQKAGG 66
Query: 150 YCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAA 209
CA++D E+ALDP A+ +G+D E LLI+QPD+ E L + DTL KSGSI VIV+DSVAA
Sbjct: 67 ICAFIDAEHALDPIYAKKLGVDTEELLISQPDTGEQALEIADTLVKSGSISVIVIDSVAA 126
Query: 210 LIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRM 269
L P+ EI + + QSR+M+QALRK+ S+ ++T++IF+NQ+R K G G
Sbjct: 127 LTPRAEIEGEMGDHHVGLQSRLMSQALRKLTGSISSTNTMMIFINQIRM--KIGVMFGS- 183
Query: 270 DEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
E TSGGNALKFY+++R+ + R K D++
Sbjct: 184 PETTSGGNALKFYSSVRMDIRRIGAIKNGDEI 215
>gi|304399192|ref|ZP_07381059.1| recA protein [Pantoea sp. aB]
gi|440757504|ref|ZP_20936689.1| RecA protein [Pantoea agglomerans 299R]
gi|304353246|gb|EFM17626.1| recA protein [Pantoea sp. aB]
gi|436428750|gb|ELP26402.1| RecA protein [Pantoea agglomerans 299R]
Length = 356
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 158/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D ENLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIASAQRKGKTCAFIDAEHALDPVYAKKLGVDIENLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKEGDNV 238
>gi|132220|sp|P29246.1|RECA_AZOVI RecName: Full=Protein RecA; AltName: Full=Recombinase A
Length = 349
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/251 (49%), Positives = 167/251 (66%), Gaps = 13/251 (5%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L I EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSTIAEAQKQGATCAFVDAEHALDPDYAAKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDQHVGLQARLMSQALRKITGNIQ 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNIL 304
++ L+IF+NQ+R K G G E T+G NALKFYA++RL + RT K +D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGN-PETTTGANALKFYASVRLDIRRTGAVKESDEV--- 236
Query: 305 EVVNIGSMIRL 315
IGS R+
Sbjct: 237 ----IGSETRV 243
>gi|379009775|ref|YP_005267588.1| DNA strand exchange/recombination protease/nuclease [Wigglesworthia
glossinidia endosymbiont of Glossina morsitans morsitans
(Yale colony)]
gi|375158299|gb|AFA41365.1| DNA strand exchange/recombination protease/nuclease [Wigglesworthia
glossinidia endosymbiont of Glossina morsitans morsitans
(Yale colony)]
Length = 333
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 162/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL LA+ Q+ FG S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KKKALDLAMYQIEKQFGHGSIMRL----GEDRSMDIETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L +I EAQK G CA++D E+ALDP+ A+++G+D NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLTIIAEAQKKGKICAFIDAEHALDPNYAKSLGVDINNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LTKSG++D+I+VDSVAAL PK EI I ++ +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDVLTKSGAVDLIIVDSVAALTPKAEIDGEIGDLHIGLAARMMSQAMRKLARN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L ++TL+IF+NQ+R K G G EVT+GGNALKFYA++RL + R K D V
Sbjct: 183 LKNANTLLIFINQIRL--KIGVIFGN-PEVTTGGNALKFYASIRLDIRRIGSIKDGDHV 238
>gi|126726569|ref|ZP_01742410.1| recombinase A [Rhodobacterales bacterium HTCC2150]
gi|126704432|gb|EBA03524.1| recombinase A [Rhodobacteraceae bacterium HTCC2150]
Length = 358
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/233 (49%), Positives = 164/233 (70%), Gaps = 3/233 (1%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL ALSQ+ FGK S++ L + ++ STGSL LD+ALGIGGLPKGR++EIYG
Sbjct: 19 ALDSALSQIERQFGKGSIMKLGQDGATQEISATSTGSLGLDIALGIGGLPKGRVIEIYGP 78
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTTL LH I E QKLGG CA++D E+ALDP A+ +G++ + LLI+QPD+ E L
Sbjct: 79 ESSGKTTLTLHSIAEEQKLGGVCAFVDAEHALDPLYAKKLGVNLDELLISQPDTGEQALE 138
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ +TL +SG+++++VVDSVAAL PK E+ + AQ+R+M+QA+RK+ ++ +S+
Sbjct: 139 ITETLVRSGAVNMVVVDSVAALTPKAELEGDMGDRQVGAQARLMSQAMRKLTGAINKSNC 198
Query: 249 LIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++IF+NQ+R K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 199 MVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGSIKDRDEV 248
>gi|425743838|ref|ZP_18861906.1| RecA protein [Acinetobacter baumannii WC-323]
gi|425492702|gb|EKU58955.1| RecA protein [Acinetobacter baumannii WC-323]
Length = 348
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 160/236 (67%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKNGGTCAFIDAEHALDPEYARKLGVDIDNLLVSQPDHGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEGDEI 236
>gi|339479391|gb|ABE95859.1| RecA protein [Bifidobacterium breve UCC2003]
Length = 392
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 162/236 (68%), Gaps = 4/236 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
++ AL AL+Q+ FGK S + L + VI TGSL LD+ALGIGGLPKGRIVE
Sbjct: 22 KRKAALDTALAQVEKSFGKGSAMRLGDQ-PVQNVEVIPTGSLALDMALGIGGLPKGRIVE 80
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+ A +G+D ++L+++QPD+ E
Sbjct: 81 IYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGE 140
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+ +L
Sbjct: 141 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 200
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
Q+ T IF+NQ+R K G G E T+GG ALKFYA++RL + R + K D+
Sbjct: 201 QAGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYASVRLDIRRIQTLKNGDE 253
>gi|456064161|ref|YP_007503131.1| recA protein [beta proteobacterium CB]
gi|455441458|gb|AGG34396.1| recA protein [beta proteobacterium CB]
Length = 362
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/250 (48%), Positives = 165/250 (66%), Gaps = 9/250 (3%)
Query: 52 EFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLA 111
EFD D K AL AL+Q+ FGK S++ L + V+S+GSL LD+A
Sbjct: 13 EFDGMSGD------KQKALTAALAQIEKQFGKGSIMRLGDAEIHQDIQVVSSGSLGLDIA 66
Query: 112 LGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGID 171
LG+GGL +GR++EIYG E+SGKTTL LH I E QK+GG CA++D E+ALD A +G+D
Sbjct: 67 LGVGGLARGRVIEIYGPESSGKTTLTLHAIAEMQKIGGTCAFIDAEHALDVQYASRLGVD 126
Query: 172 AENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRI 231
NLLI+QPD+ E L + D L +SGSID+IV+DSVAAL+P+ EI + Q+R+
Sbjct: 127 VNNLLISQPDTGEQALEIADALVRSGSIDLIVIDSVAALVPRAEIEGDMGDSLPGLQARL 186
Query: 232 MTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
M+QALRK+ ++ +++T +IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 187 MSQALRKLTGAIKRTNTTVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASMRLDIRR 243
Query: 292 TRLFKIADKV 301
K D+V
Sbjct: 244 IGSIKKGDEV 253
>gi|332799245|ref|YP_004460744.1| protein recA [Tepidanaerobacter acetatoxydans Re1]
gi|438002374|ref|YP_007272117.1| RecA protein [Tepidanaerobacter acetatoxydans Re1]
gi|332696980|gb|AEE91437.1| Protein recA [Tepidanaerobacter acetatoxydans Re1]
gi|432179168|emb|CCP26141.1| RecA protein [Tepidanaerobacter acetatoxydans Re1]
Length = 345
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 169/239 (70%), Gaps = 3/239 (1%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+ +K+ AL +A++Q+ FGK S++ L ISTG+L LD+ALG+GG+P+GR+
Sbjct: 1 MAEKEKALEMAITQIERQFGKGSIMKLGEAAARFNIEAISTGALPLDIALGVGGVPRGRV 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTT+ALH+I EAQK GG A++D E+ALDP+ A+ +G++ ++LLI+QPD+
Sbjct: 61 IEIFGPESSGKTTVALHIIAEAQKGGGTAAFIDAEHALDPTYAKNLGVNTDDLLISQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + +TL +SG++DV+V+DSVAAL+PK EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEIAETLVRSGAVDVVVIDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLSGA 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S+T+ IF+NQ+R K G G E T GG ALKFY+++RL + R K +++
Sbjct: 181 ISKSNTVAIFINQLR--EKVGIMFGN-PETTPGGRALKFYSSVRLDVRRIETLKQGEEM 236
>gi|149688784|gb|ABR27803.1| RecA [Candidatus Pelagibacter ubique HTCC1002]
Length = 289
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/212 (54%), Positives = 151/212 (71%), Gaps = 6/212 (2%)
Query: 93 FGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGG 149
G RR ISTGSL LD+ALGIGGLPKGR++E+YG E+SGKTTLAL V+ EAQK GG
Sbjct: 7 LGQRRAMDVESISTGSLSLDVALGIGGLPKGRVIEVYGPESSGKTTLALQVLAEAQKAGG 66
Query: 150 YCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAA 209
CA++D E+ALDP A+ +G+D E LLI+QPD+ E L + DTL KSGSI VIV+DSVAA
Sbjct: 67 ICAFIDAEHALDPIYAKKLGVDTEELLISQPDTGEQALEIADTLVKSGSISVIVIDSVAA 126
Query: 210 LIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRM 269
L P+ EI + + QSR+M+QALRK+ S+ ++T++IF+NQ+R K G G
Sbjct: 127 LTPRAEIEGEMGDHHVGLQSRLMSQALRKLTGSISSTNTMMIFINQIRM--KIGVMFGS- 183
Query: 270 DEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
E TSGGNALKFY+++R+ + R K D++
Sbjct: 184 PETTSGGNALKFYSSVRMDIRRIGAIKNGDEI 215
>gi|11387040|sp|Q9S660.1|RECA_BIFBR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|4416209|gb|AAD20261.1| RecA protein [Bifidobacterium breve]
Length = 392
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 162/236 (68%), Gaps = 4/236 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
++ AL AL+Q+ FGK S + L + VI TGSL LD+ALGIGGLPKGRIVE
Sbjct: 22 KRKAALDTALAQVEKSFGKGSAMRLGDQ-PVQNVEVIPTGSLALDMALGIGGLPKGRIVE 80
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+ A +G+D ++L+++QPD+ E
Sbjct: 81 IYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGE 140
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+ +L
Sbjct: 141 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 200
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
Q+ T IF+NQ+R K G G E T+GG ALKFYA++RL + R + K D+
Sbjct: 201 QAGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYASVRLDIRRIQTLKNGDE 253
>gi|333369804|ref|ZP_08461900.1| recombination protein A [Psychrobacter sp. 1501(2011)]
gi|332969626|gb|EGK08643.1| recombination protein A [Psychrobacter sp. 1501(2011)]
Length = 350
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/236 (49%), Positives = 161/236 (68%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ AL Q+ FGK +++ L + V+STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KAKALKAALGQIEKQFGKNTIMHLGDNSAALDVDVVSTGSLGLDIALGIGGLPKGRIVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L I E QK GG CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQAIAECQKQGGTCAFIDAEHALDPVYARKLGVNTDDLLVSQPDNGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D+IV+DSVAAL P+ EI + + Q+R+M+QALRKI + +
Sbjct: 125 ALEITDMLVRSGALDMIVIDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 185 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKSGDEI 237
>gi|269925195|ref|YP_003321818.1| recA protein [Thermobaculum terrenum ATCC BAA-798]
gi|269788855|gb|ACZ40996.1| recA protein [Thermobaculum terrenum ATCC BAA-798]
Length = 344
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 160/231 (69%), Gaps = 3/231 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+D AL A++Q+ FG S++ + + I TGS+ LD+ALG+GG+P+GRIVEI
Sbjct: 4 RDKALESAIAQIERAFGTGSIMRMTGDRAKMQIEAIPTGSIALDIALGVGGVPRGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLA H+I EAQKLGG AY+D E+A DPS AE G+ +LLI+QPD+ E
Sbjct: 64 YGPESSGKTTLAQHIIAEAQKLGGTAAYIDAEHAFDPSYAEKCGVQLSDLLISQPDTGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + +TL +SG++DV+V+DSVAAL+P+ EI + + Q+R+M+QALRK+ ++ +
Sbjct: 124 ALEIAETLVRSGAVDVVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLAGAVNK 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
S T++IF+NQ+R K G G E TSGGNALKFYA++RL + + K
Sbjct: 184 SKTVLIFINQIRM--KIGVMFGN-PETTSGGNALKFYASVRLEIRKVESIK 231
>gi|352683763|ref|YP_004895747.1| recA protein [Acidaminococcus intestini RyC-MR95]
gi|350278417|gb|AEQ21607.1| recA protein [Acidaminococcus intestini RyC-MR95]
Length = 354
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/237 (47%), Positives = 159/237 (67%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL A+ Q+ DFGK S++ L I TG+L LD+ALG+GG+P+GRI+E
Sbjct: 6 EKGKALDAAVKQIEKDFGKGSIMKLGAASAKMNIETIPTGALSLDIALGVGGIPRGRIIE 65
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTT+ALH+I EAQK GGY A++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 66 IYGPESSGKTTVALHMIAEAQKRGGYAAFIDAEHALDPEYARHLGVDIDNLLISQPDTGE 125
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG+ID+IV+DSVAAL+PK EI + + Q+R+M+QALRK+ +
Sbjct: 126 QALEICDALVRSGAIDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTGIIS 185
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S T +F+NQ+R K G G E T+GG ALKFY+ +R+ + R K + +
Sbjct: 186 KSRTATVFINQIR--EKVGVMFGN-PETTTGGRALKFYSTVRMDVRRIESLKSGNDI 239
>gi|323141085|ref|ZP_08075990.1| RecA protein [Phascolarctobacterium succinatutens YIT 12067]
gi|322414461|gb|EFY05275.1| RecA protein [Phascolarctobacterium succinatutens YIT 12067]
Length = 350
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/250 (46%), Positives = 165/250 (66%), Gaps = 10/250 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL +A+ Q+ DFGK S++ L VI TG+L LD+ALG+GG+P+GR++EI
Sbjct: 5 KKKALDMAMHQIEKDFGKGSIMMLGEASAKMNIEVIPTGALSLDIALGVGGIPRGRVIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+I EAQK+GGY A++D E+ALDP A +G+D ++LLI+QPD+ E
Sbjct: 65 YGPESSGKTTVALHMIAEAQKMGGYAAFIDAEHALDPEYARHLGVDIDDLLISQPDNGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IV+DSVAAL+P+ EI + + Q+R+M+QALRK+ + +
Sbjct: 125 ALEIADALVRSGAIDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGLISK 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNILE 305
S IF+NQ+R K G G E T+GG ALKFY+ +R+ + R K + V
Sbjct: 185 SKCATIFINQIR--EKVGVMFGN-PETTTGGRALKFYSTVRMDVRRIDTLKNGNDV---- 237
Query: 306 VVNIGSMIRL 315
IGS R+
Sbjct: 238 ---IGSRTRV 244
>gi|85708968|ref|ZP_01040034.1| recombinase A [Erythrobacter sp. NAP1]
gi|85690502|gb|EAQ30505.1| recombinase A [Erythrobacter sp. NAP1]
Length = 354
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/243 (49%), Positives = 167/243 (68%), Gaps = 10/243 (4%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLP 118
K + + AL AL+Q+ FGK S + L GS+ ISTGSL LD+ALGIGGLP
Sbjct: 12 KDVDRQKALDAALAQIDRAFGKGSAMKL----GSKEAMQVESISTGSLGLDIALGIGGLP 67
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGR++E+YG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G+D + L+++
Sbjct: 68 KGRVIEVYGPESSGKTTLALHCIAEAQKAGGTAAFVDAEHALDPVYAKKLGVDIDELVVS 127
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +S ++DV+VVDSVAAL+P+ EI + + Q+R+M+Q+LRK
Sbjct: 128 QPDTGEQALEITDTLVRSNAVDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRK 187
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K
Sbjct: 188 LTGSINRSKCMVIFINQLRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRTGQIKDR 244
Query: 299 DKV 301
D+V
Sbjct: 245 DEV 247
>gi|402698774|ref|ZP_10846753.1| recombinase A [Pseudomonas fragi A22]
Length = 368
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/239 (50%), Positives = 161/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK +++ G + P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 5 KKKALAAALGQIERQFGKGAVM----LMGDQERQAVPAISTGSLGLDIALGIGGLPKGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 61 VEIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAAKLGVNVDDLLVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +S ++DVI++DSVAAL PK EI + M+ Q+R+M+QALRKI +
Sbjct: 121 GEQALEITDMLVRSNAVDVIIIDSVAALTPKAEIEGDMGDMHVGLQARLMSQALRKITGN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ ++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D V
Sbjct: 181 IKNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDVV 236
>gi|359428516|ref|ZP_09219548.1| protein RecA [Acinetobacter sp. NBRC 100985]
gi|358236059|dbj|GAB01087.1| protein RecA [Acinetobacter sp. NBRC 100985]
Length = 348
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 160/236 (67%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKNGGTCAFIDAEHALDPEYARKLGVDIDNLLVSQPDHGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|290476265|ref|YP_003469169.1| DNA strand exchange and recombination protein [Xenorhabdus bovienii
SS-2004]
gi|289175602|emb|CBJ82405.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Xenorhabdus bovienii SS-2004]
Length = 358
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 160/240 (66%), Gaps = 10/240 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GR
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRL----GENRSMDVETISTGSLSLDIALGAGGLPMGR 61
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD
Sbjct: 62 IVEIYGPESSGKTTLTLQVIASAQREGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPD 121
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D L++SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+
Sbjct: 122 TGEQALEICDALSRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAG 181
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+L S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 NLKNSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGSVKNGDEV 238
>gi|406990642|gb|EKE10279.1| hypothetical protein ACD_16C00058G0003 [uncultured bacterium]
Length = 343
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M+K AL AL Q+ FGK S++ L + +S+GSL LD+ALGIGGLPKGRIV
Sbjct: 1 MEKKKALEAALGQIEKAFGKGSVMRLGQRDVVADVSSVSSGSLGLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D +NL+I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAVAEAQKAGGTCAFVDAEHALDPVYARKLGVDTDNLIISQPDAG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+V+DSVAAL+P+ E+ + + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAIDVLVIDSVAALVPRAELEGEMGDTHVGLQARLMSQALRKLTGSV 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+++ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 181 SKTNCMVIFINQIRH--KIGIMFGN-PETTTGGNALKFYASIRLDIRRIGSLKDRDEV 235
>gi|384196826|ref|YP_005582570.1| recombinase A [Bifidobacterium breve ACS-071-V-Sch8b]
gi|333110211|gb|AEF27227.1| RecA protein [Bifidobacterium breve ACS-071-V-Sch8b]
Length = 394
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 162/236 (68%), Gaps = 4/236 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
++ AL AL+Q+ FGK S + L + VI TGSL LD+ALGIGGLPKGRIVE
Sbjct: 22 KRKAALDTALAQVEKSFGKGSAMRLGDQ-PVQNVEVIPTGSLALDMALGIGGLPKGRIVE 80
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+ A +G+D ++L+++QPD+ E
Sbjct: 81 IYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGE 140
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+ +L
Sbjct: 141 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 200
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
Q+ T IF+NQ+R K G G E T+GG ALKFYA++RL + R + K D+
Sbjct: 201 QAGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYASVRLDIRRIQTLKNGDE 253
>gi|404368013|ref|ZP_10973372.1| protein recA [Fusobacterium ulcerans ATCC 49185]
gi|313690549|gb|EFS27384.1| protein recA [Fusobacterium ulcerans ATCC 49185]
Length = 363
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/243 (47%), Positives = 165/243 (67%), Gaps = 9/243 (3%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLP 118
++ +K+ AL LA+ Q+ DFG+ S++ L G + VISTGS+ LD ALG+GG+P
Sbjct: 12 EVSEKEKALELAMKQIKKDFGEGSIMKL----GDNQEMNIEVISTGSINLDAALGLGGVP 67
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GR+VEIYG E+SGKTT+ALH+ EAQK GG A++D E+ALDP A+A+G+D + LLI+
Sbjct: 68 RGRVVEIYGAESSGKTTIALHIAAEAQKAGGIVAFIDAEHALDPVYAKALGVDVDELLIS 127
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD E L + D L +SG++D I+VDSVAAL+PK EI + Q+R+M++ALRK
Sbjct: 128 QPDYGEQALEIADMLVRSGAVDAIIVDSVAALVPKVEIDGEMGDQQMGLQARLMSKALRK 187
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ +L +S T +IF+NQ+R G G G T+GG ALKFY+++R+ + R K
Sbjct: 188 LTATLNKSKTTMIFINQIR-DKIGGFGFGPQT-TTTGGKALKFYSSVRMEVKRIGSVKQG 245
Query: 299 DKV 301
D+V
Sbjct: 246 DEV 248
>gi|149688798|gb|ABR27810.1| RecA [Candidatus Pelagibacter ubique]
Length = 289
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 151/212 (71%), Gaps = 6/212 (2%)
Query: 93 FGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGG 149
G RR +STGSL LD+ALGIGGLPKGR++E+YG E+SGKTTLAL V+ EAQK GG
Sbjct: 7 LGQRRAMDVESVSTGSLSLDVALGIGGLPKGRVIEVYGPESSGKTTLALQVLAEAQKAGG 66
Query: 150 YCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAA 209
CA++D E+ALDP A+ +G+D E LLI+QPD+ E L + DTL KSGSI VIV+DSVAA
Sbjct: 67 ICAFIDAEHALDPIYAKKLGVDTEELLISQPDTGEQALEIADTLVKSGSISVIVIDSVAA 126
Query: 210 LIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRM 269
L P+ EI + + QSR+M+QALRK+ S+ ++T++IF+NQ+R K G G
Sbjct: 127 LTPRAEIEGEMGDHHVGLQSRLMSQALRKLTGSISSTNTMMIFINQIRM--KIGVMFGS- 183
Query: 270 DEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
E TSGGNALKFY+++R+ + R K D++
Sbjct: 184 PETTSGGNALKFYSSVRMDIRRIGAIKNGDEI 215
>gi|97537035|sp|Q07809.2|RECA_PSEST RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|50250477|emb|CAH03858.1| RecA protein [Pseudomonas stutzeri]
Length = 347
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 163/237 (68%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPSISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI AQ++G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAAAQRMGSTCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|319940910|ref|ZP_08015248.1| recA [Sutterella wadsworthensis 3_1_45B]
gi|319805626|gb|EFW02414.1| recA [Sutterella wadsworthensis 3_1_45B]
Length = 381
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/237 (49%), Positives = 164/237 (69%), Gaps = 4/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
++ AL AL+ + FGK +++ + + V+STGSL LDLALG+GGLP+GRIVE
Sbjct: 18 ERKKALNAALASIEKQFGKGAIMRMADGVEQQNIEVVSTGSLGLDLALGVGGLPRGRIVE 77
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL+L VI E QK+GG CA++D E+ALD A+ +G++ LL++QPD+ E
Sbjct: 78 IYGPESSGKTTLSLQVIAEMQKIGGTCAFVDAEHALDIQYAQRLGVNVPELLLSQPDAGE 137
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L +VD L +SGSID+IVVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 138 QALEIVDALVRSGSIDLIVVDSVAALTPRSEIEGDMGDALPGLQARLMSQALRKLTTSVS 197
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G G E T+GGNALKFY+++RL + R K AD+V
Sbjct: 198 RTKCLVIFINQIRM--KIG-GYGN-PETTTGGNALKFYSSVRLDIRRVGAIKRADEV 250
>gi|408359052|gb|AFU55263.1| recombinase A [Xenorhabdus stockiae]
Length = 358
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 161/240 (67%), Gaps = 10/240 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GR
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRL----GENRSMDVETISTGSLSLDIALGAGGLPMGR 61
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD
Sbjct: 62 IVEIYGPESSGKTTLTLQVIAAAQREGRTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPD 121
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D L++SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+
Sbjct: 122 TGEQALEICDALSRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAG 181
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+L S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K +D+V
Sbjct: 182 NLKNSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGSVKNSDEV 238
>gi|149688794|gb|ABR27808.1| RecA [Candidatus Pelagibacter ubique]
Length = 289
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 151/212 (71%), Gaps = 6/212 (2%)
Query: 93 FGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGG 149
G RR +STGSL LD+ALGIGGLPKGR++E+YG E+SGKTTLAL V+ EAQK GG
Sbjct: 7 LGQRRAMDVESVSTGSLSLDVALGIGGLPKGRVIEVYGPESSGKTTLALQVLAEAQKAGG 66
Query: 150 YCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAA 209
CA++D E+ALDP A+ +G+D E LLI+QPD+ E L + DTL KSGSI VIV+DSVAA
Sbjct: 67 ICAFIDAEHALDPIYAKKLGVDTEELLISQPDTGEQALEIADTLVKSGSISVIVIDSVAA 126
Query: 210 LIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRM 269
L P+ EI + + QSR+M+QALRK+ S+ ++T++IF+NQ+R K G G
Sbjct: 127 LTPRAEIEGEMGDHHVGLQSRLMSQALRKLTGSISSTNTMMIFINQIRM--KIGVMFGS- 183
Query: 270 DEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
E TSGGNALKFY+++R+ + R K D++
Sbjct: 184 PETTSGGNALKFYSSVRMDIRRIGAIKNGDEI 215
>gi|315917818|ref|ZP_07914058.1| recombinase A [Fusobacterium gonidiaformans ATCC 25563]
gi|313691693|gb|EFS28528.1| recombinase A [Fusobacterium gonidiaformans ATCC 25563]
Length = 359
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/240 (48%), Positives = 164/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
++ K AL A+ ++ DFG+ +++ L + VI TGSL LD ALG+GG+P+GR
Sbjct: 10 ELTAKQKALETAVKEITKDFGEGAIMKLGDN-SHMQIEVIPTGSLNLDAALGLGGVPRGR 68
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
+VEIYG E+SGKTT+ALH+I EAQK+GG A++D E+ALDP A+A+G+D + LLI+QPD
Sbjct: 69 VVEIYGAESSGKTTIALHIIAEAQKMGGIAAFIDAEHALDPVYAKALGVDIDELLISQPD 128
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
E L + DTL +SG+IDVIVVDSVAAL+PK EI ++ Q+R+M++ALRK+
Sbjct: 129 FGEQALDIADTLVRSGAIDVIVVDSVAALVPKVEIDGEMSDQQMGLQARLMSKALRKLTA 188
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+L +S T +IF+NQ+R G G G T+GG ALKFY+++R+ + R K D V
Sbjct: 189 TLNKSKTTMIFINQIR-EKIGGFGFGPQT-TTTGGKALKFYSSVRMEVKRIASVKQGDDV 246
>gi|291457715|ref|ZP_06597105.1| protein RecA [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|291380768|gb|EFE88286.1| protein RecA [Bifidobacterium breve DSM 20213 = JCM 1192]
Length = 416
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 162/236 (68%), Gaps = 4/236 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
++ AL AL+Q+ FGK S + L + VI TGSL LD+ALGIGGLPKGRIVE
Sbjct: 44 KRKAALDTALAQVEKSFGKGSAMRLGDQ-PVQNVEVIPTGSLALDMALGIGGLPKGRIVE 102
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+ A +G+D ++L+++QPD+ E
Sbjct: 103 IYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGE 162
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+ +L
Sbjct: 163 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 222
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
Q+ T IF+NQ+R K G G E T+GG ALKFYA++RL + R + K D+
Sbjct: 223 QAGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYASVRLDIRRIQTLKNGDE 275
>gi|341614587|ref|ZP_08701456.1| recombinase A [Citromicrobium sp. JLT1363]
Length = 353
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/258 (47%), Positives = 174/258 (67%), Gaps = 14/258 (5%)
Query: 47 AAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVIST 103
AA++ DD+ + + + AL AL+Q+ FGK S + L GS+ IST
Sbjct: 2 AAKLKLVDDKESN----VDRQKALDAALAQIDRAFGKGSAMKL----GSKEAMNVEAIST 53
Query: 104 GSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPS 163
GSL LD+ALG+GGLPKGR++E+YG E+SGKTTLALHV+ E QK GG A++D E+ALDP
Sbjct: 54 GSLGLDIALGVGGLPKGRVIEVYGPESSGKTTLALHVLAECQKAGGTVAFVDAEHALDPV 113
Query: 164 LAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGM 223
A +G+D + L+++QPD+ E L +VDTL +S +IDV+VVDSVAAL+P+ EI +
Sbjct: 114 YARKLGVDIDELIVSQPDTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDS 173
Query: 224 YSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYA 283
+ Q+R+M+Q+LRK+ S+ +S ++IF+NQ+R K G G E T+GGNALKFYA
Sbjct: 174 HVGLQARLMSQSLRKLTGSINRSKCMVIFINQLRM--KIGVMYGN-PETTTGGNALKFYA 230
Query: 284 ALRLRMMRTRLFKIADKV 301
++RL + RT K D++
Sbjct: 231 SVRLDIRRTGQIKDRDEI 248
>gi|227357822|ref|ZP_03842170.1| recombination protein A [Proteus mirabilis ATCC 29906]
gi|227161932|gb|EEI46950.1| recombination protein A [Proteus mirabilis ATCC 29906]
Length = 364
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/268 (48%), Positives = 171/268 (63%), Gaps = 21/268 (7%)
Query: 51 PEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLK 107
PE D+ D+ K AL AL Q+ FGK S++ L G R ISTGSL
Sbjct: 5 PEGDNMAIDE----NKQKALAAALGQIEKQFGKGSIMRL----GEDRSMNVETISTGSLS 56
Query: 108 LDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEA 167
LD+ALG GGLP+GRIVEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+
Sbjct: 57 LDVALGAGGLPRGRIVEIYGPESSGKTTLTLQVIASAQREGKICAFIDAEHALDPIYAQK 116
Query: 168 MGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDA 227
+G+D +NLL +QPD+ E L + D L++SG++DVIVVDSVAAL PK EI I +
Sbjct: 117 LGVDIDNLLCSQPDTGEQALEICDALSRSGAVDVIVVDSVAALTPKAEIEGEIGDSHVGL 176
Query: 228 QSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRL 287
+R+M+QA+RK+ +L S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL
Sbjct: 177 AARMMSQAMRKLAGNLKNSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRL 233
Query: 288 RMMRTRLFKIADKVNILEVVNIGSMIRL 315
+ R K D+V IGS R+
Sbjct: 234 DIRRIGSVKNGDEV-------IGSETRV 254
>gi|6226684|sp|P96185.2|RECA_XENBV RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|4220426|gb|AAD12585.1| RecA [Xenorhabdus bovienii]
Length = 358
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 160/240 (66%), Gaps = 10/240 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GR
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRL----GENRSMDVETISTGSLSLDIALGAGGLPMGR 61
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD
Sbjct: 62 IVEIYGPESSGKTTLTLQVIASAQREGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPD 121
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D L++SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+
Sbjct: 122 TGEQALEICDALSRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAG 181
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+L S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 NLKNSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGSVKNGDEV 238
>gi|158336682|ref|YP_001517856.1| recombinase A [Acaryochloris marina MBIC11017]
gi|158306923|gb|ABW28540.1| protein RecA [Acaryochloris marina MBIC11017]
Length = 356
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/238 (49%), Positives = 167/238 (70%), Gaps = 5/238 (2%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D++ +KD AL + L+Q+ FGK S++ L + IS+G+L LDLALG GGLP
Sbjct: 4 DNSTNSEKDKALGVVLNQIERTFGKGSIMRLGDAT-QMKVETISSGALTLDLALG-GGLP 61
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGR++EIYG E+SGKTTLALH I E Q+ GG A++D E+ALDP+ A A+G+D ENLL+A
Sbjct: 62 KGRVIEIYGPESSGKTTLALHAIAEVQRSGGIAAFVDAEHALDPTYASALGVDTENLLVA 121
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E+ L +VD L +S ++D++V+DSVAAL+P+ EI + + Q+R+M+QALRK
Sbjct: 122 QPDTGESALEIVDQLVRSTAVDIVVIDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRK 181
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
I ++ ++ ++FLNQ+R K G G EVT+GGNALKFYA++RL + R + K
Sbjct: 182 ITGNIGRTGCTVVFLNQLR--QKIGVTYGN-PEVTTGGNALKFYASVRLDIRRIQTLK 236
>gi|421463945|ref|ZP_15912638.1| RecA protein [Acinetobacter radioresistens WC-A-157]
gi|421855941|ref|ZP_16288313.1| protein RecA [Acinetobacter radioresistens DSM 6976 = NBRC 102413]
gi|400206319|gb|EJO37296.1| RecA protein [Acinetobacter radioresistens WC-A-157]
gi|403188624|dbj|GAB74514.1| protein RecA [Acinetobacter radioresistens DSM 6976 = NBRC 102413]
Length = 348
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 160/236 (67%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALNAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL P+ EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|397686222|ref|YP_006523541.1| recombinase A [Pseudomonas stutzeri DSM 10701]
gi|395807778|gb|AFN77183.1| recombinase A [Pseudomonas stutzeri DSM 10701]
Length = 347
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 163/237 (68%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPSISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI AQ++G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAAAQRMGSTCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|315499501|ref|YP_004088304.1| reca protein [Asticcacaulis excentricus CB 48]
gi|315417513|gb|ADU14153.1| recA protein [Asticcacaulis excentricus CB 48]
Length = 356
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 161/237 (67%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL AL+Q+ FGK S++ L ISTGSL LD+ALGIGGLPKGR++E
Sbjct: 15 EKQRALESALAQIDRAFGKGSVMKLGNAGKVVEVESISTGSLGLDMALGIGGLPKGRVIE 74
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTLALH + E QK GG A++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 75 IYGPESSGKTTLALHTVAEIQKAGGTAAFVDAEHALDPVYAHKLGVNLDDLLVSQPDNGE 134
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + DTL +SG++D++VVDSVAAL PK EI + Q+R+M+QALRK+ S+
Sbjct: 135 QALEITDTLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSLPGLQARLMSQALRKLTASIS 194
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S ++IF+NQ+R K G G E T+GGNALKFYA++RL + K+ D++
Sbjct: 195 KSKCIVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRSIGKIKVRDEI 248
>gi|149924950|ref|ZP_01913278.1| recombinase A [Plesiocystis pacifica SIR-1]
gi|149814175|gb|EDM73790.1| recombinase A [Plesiocystis pacifica SIR-1]
Length = 378
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/240 (50%), Positives = 162/240 (67%), Gaps = 5/240 (2%)
Query: 65 QKDNALRLALSQLANDFGKESM--LSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
Q+ A+ LAL+ + FGK S+ LS S+ PV+ TG L LD+ALGIGGLP+GRI
Sbjct: 13 QRSAAIDLALATIEKQFGKGSIMRLSADGKLPSQDVPVVPTGCLGLDIALGIGGLPRGRI 72
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL LH + EAQ+ GG CA++D E+ALD A +G+ E+LLI+QPD
Sbjct: 73 VEIYGPESSGKTTLTLHAVAEAQRQGGVCAFIDAEHALDVGYARKIGVKTEDLLISQPDY 132
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG+IDVIVVDSVAAL PK E+ + + Q+R+M+QALRK+ S
Sbjct: 133 GEQALEICDMLVRSGAIDVIVVDSVAALTPKAELEGEMGDSHVGLQARLMSQALRKLTGS 192
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+ + TL+IF+NQ+R +K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 193 VSRGRTLVIFINQLR--SKIGVMFG-SPETTTGGNALKFYSSVRLDIRRIGKIKQGDQVT 249
>gi|329849340|ref|ZP_08264186.1| protein RecA [Asticcacaulis biprosthecum C19]
gi|328841251|gb|EGF90821.1| protein RecA [Asticcacaulis biprosthecum C19]
Length = 360
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/239 (49%), Positives = 164/239 (68%), Gaps = 7/239 (2%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRI 122
+K AL AL+Q+ FGK S++ L G + V ISTGSL LD+ALGIGGLPKGR+
Sbjct: 15 EKQRALEAALAQIDRAFGKGSVMRLG--VGGKIAEVESISTGSLGLDIALGIGGLPKGRV 72
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG E+SGKTTLALH + E QK GG A++D E+ALDP+ A +G++ E LL++QPD+
Sbjct: 73 IEIYGPESSGKTTLALHTVAEIQKAGGTAAFVDAEHALDPTYAGKLGVNLEELLVSQPDN 132
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+ S
Sbjct: 133 GEQALEITDTLVRSGAVDIVVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTGS 192
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + K+ D++
Sbjct: 193 ISKSKCIVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRSIGKIKVRDEI 248
>gi|83858788|ref|ZP_00952310.1| recombinase A [Oceanicaulis sp. HTCC2633]
gi|83853611|gb|EAP91463.1| recombinase A [Oceanicaulis sp. HTCC2633]
Length = 360
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/241 (50%), Positives = 162/241 (67%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKG 120
M K AL AL+Q+ FGK S++ L G++ ISTGSL LD+ALG+GGLPKG
Sbjct: 14 MDKQKALEAALTQIDRAFGKGSVMKL----GAKPDQDIQAISTGSLGLDIALGVGGLPKG 69
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALH + E QK GG A++D E+ALDP A +G+D LL++QP
Sbjct: 70 RIVEIYGPESSGKTTLALHTVAECQKSGGTAAFVDAEHALDPVYARKLGVDVSELLVSQP 129
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+V+DSVAAL P+ E+ + Q+R+M+QALRK+
Sbjct: 130 DAGEQALEIADTLVRSGAIDVLVIDSVAALTPRAELEGDMGDSLPGLQARLMSQALRKLT 189
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +S L+IF+NQ+R K G G E T+GGNALKFY+++RL + R K D+
Sbjct: 190 ASISKSKCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGAIKNRDE 246
Query: 301 V 301
V
Sbjct: 247 V 247
>gi|378581076|ref|ZP_09829726.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Pantoea stewartii subsp. stewartii
DC283]
gi|377816155|gb|EHT99260.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Pantoea stewartii subsp. stewartii
DC283]
Length = 356
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 158/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG EASGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPEASGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKEGDNV 238
>gi|407473997|ref|YP_006788397.1| recombinase A [Clostridium acidurici 9a]
gi|407050505|gb|AFS78550.1| recombinase A [Clostridium acidurici 9a]
Length = 357
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/251 (46%), Positives = 169/251 (67%), Gaps = 11/251 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL +A+SQ+ FGK S+++L +STG+L LD+A+GIGG P+GRI+E
Sbjct: 3 EKAKALEMAISQIEKQFGKGSIMTLGEE-SKLNVEAVSTGALDLDIAIGIGGFPRGRIIE 61
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTT+ALH I E QK+GG A++D E+ALDP A+ +G+D ENL+++QPD+ E
Sbjct: 62 IYGPESSGKTTVALHAIAEHQKIGGVAAFIDAEHALDPQYAKNLGVDIENLIVSQPDTGE 121
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + + L +SG++D+IVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++
Sbjct: 122 QALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHIGLQARLMSQALRKLAGAIK 181
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNIL 304
+S+T IF+NQ+R K G G E T+GG ALKFYA++RL + R K ++V
Sbjct: 182 RSNTTAIFINQLR--EKVGVMFGS-PETTTGGRALKFYASVRLDVRRIEALKQGEEV--- 235
Query: 305 EVVNIGSMIRL 315
IGS R+
Sbjct: 236 ----IGSRTRI 242
>gi|227495813|ref|ZP_03926124.1| recombination protein A [Actinomyces urogenitalis DSM 15434]
gi|226834635|gb|EEH67018.1| recombination protein A [Actinomyces urogenitalis DSM 15434]
Length = 399
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/242 (48%), Positives = 163/242 (67%), Gaps = 8/242 (3%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLP 118
A+ + AL ALSQ+ FGK S++ R R PV I TGS+ LD+ALG+GGLP
Sbjct: 4 AQTQDRSKALATALSQIDKAFGKGSVM---RLGDDTRPPVSVIPTGSIALDVALGVGGLP 60
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRI+EIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A+A+G+D +NLL++
Sbjct: 61 RGRIIEIYGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPVYAKALGVDTDNLLVS 120
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + D L +SG +D+IV+DSVAAL+PK EI + + Q+R+M+QALRK
Sbjct: 121 QPDTGEQALEIADMLIRSGGLDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRK 180
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
I +L + T IF+NQ+R K G G E T+GG ALKFYA++R+ + R + K
Sbjct: 181 ITGALSATGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYASVRIDVRRIQTLKDG 237
Query: 299 DK 300
D+
Sbjct: 238 DQ 239
>gi|443323255|ref|ZP_21052263.1| protein RecA [Gloeocapsa sp. PCC 73106]
gi|442786993|gb|ELR96718.1| protein RecA [Gloeocapsa sp. PCC 73106]
Length = 359
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 164/236 (69%), Gaps = 5/236 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL L LSQ+ +FGK +++ L R I +G+L LDLALG GGLPKGRI+EI
Sbjct: 12 KEKALNLVLSQIERNFGKGAIMRLGDAI-QMRVETIPSGALTLDLALG-GGLPKGRIIEI 69
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I E QK GG A++D E+ALDP+ +EA+G+D NLL+AQPD+ E+
Sbjct: 70 YGPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSEALGVDIANLLVAQPDTGES 129
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L +VD L +S ++D++V+DSVAAL+P+ EI + Q+R+M++ALRKI ++ +
Sbjct: 130 ALEIVDQLVRSAAVDLVVIDSVAALVPRAEIEGEMGDTQVGLQARLMSKALRKIAGNMSK 189
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S +IFLNQ+R K G G EVT+GGNALKFYA++RL + R + K +V
Sbjct: 190 SGCTVIFLNQLR--QKIGVTYGN-PEVTTGGNALKFYASIRLDIRRIQTLKKGSEV 242
>gi|398792411|ref|ZP_10553042.1| protein RecA [Pantoea sp. YR343]
gi|398213140|gb|EJM99735.1| protein RecA [Pantoea sp. YR343]
Length = 356
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 159/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIASAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKEGDEV 238
>gi|398801684|ref|ZP_10560922.1| protein RecA [Pantoea sp. GM01]
gi|398091368|gb|EJL81813.1| protein RecA [Pantoea sp. GM01]
Length = 356
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 159/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIASAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKEGDEV 238
>gi|148653778|ref|YP_001280871.1| recombinase A [Psychrobacter sp. PRwf-1]
gi|172048565|sp|A5WGY0.1|RECA_PSYWF RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|148572862|gb|ABQ94921.1| recA protein [Psychrobacter sp. PRwf-1]
Length = 349
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/236 (48%), Positives = 161/236 (68%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ AL Q+ FGK +++ L + V+STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KAKALKAALGQIEKQFGKNTIMHLGDNSATLDVDVVSTGSLGLDIALGIGGLPKGRIIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L I E QK GG CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQAIAECQKQGGTCAFIDAEHALDPIYARKLGVNTDDLLVSQPDNGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D+IV+DSVAAL P+ EI + + Q+R+M+QALRKI + +
Sbjct: 125 ALEITDMLVRSGALDMIVIDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 185 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKSGDEI 237
>gi|160872478|ref|ZP_02062610.1| protein RecA [Rickettsiella grylli]
gi|159121277|gb|EDP46615.1| protein RecA [Rickettsiella grylli]
Length = 351
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 168/238 (70%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL++ALSQ+ G+ +++ R S R V ISTGSL LD+ALGIGGLP+GRIV
Sbjct: 8 REKALKMALSQIKKQHGEGAVM---RLGDSSRVSVDVISTGSLGLDIALGIGGLPRGRIV 64
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L I E QK+GG A++D E+ALD + AE +G+ ++LL++QPD+
Sbjct: 65 EIYGPESSGKTTLTLQTIAECQKMGGVAAFVDAEHALDANYAEKLGVKKDDLLVSQPDTG 124
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L +VD L +S +ID+IVVDSVAAL P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 125 EQALEIVDMLVRSNAIDIIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKLAGNI 184
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K +D+V
Sbjct: 185 KRSNTLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGSIKKSDEV 239
>gi|410667508|ref|YP_006919879.1| protein RecA [Thermacetogenium phaeum DSM 12270]
gi|409105255|gb|AFV11380.1| protein RecA [Thermacetogenium phaeum DSM 12270]
Length = 348
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 162/231 (70%), Gaps = 3/231 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL LALS + FG+ S++ L VI +G+L LDLALG+GG+P+GRI+EI
Sbjct: 4 KLKALELALSHIEKAFGRGSIMRLGDTPAQLNVDVIPSGNLPLDLALGVGGIPRGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALHV+ EAQK GG A++D E+ALDP A+A+G+D +NL ++QPD+ E
Sbjct: 64 YGPESSGKTTVALHVVAEAQKRGGMAAFIDAEHALDPVYAQALGVDIDNLYVSQPDTGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + +TL +SG++DVIV+DSVAAL+P+ E+ + + Q+R+M+QALRK+ ++ +
Sbjct: 124 ALEITETLVRSGALDVIVIDSVAALVPRAELEGEMGDAHVGLQARLMSQALRKLTGTISK 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+ T IF+NQ+R K G G EVT+GG ALKFYA++RL + + L K
Sbjct: 184 TKTTAIFINQIR--EKVGVMFGN-PEVTTGGRALKFYASVRLEVKKIDLIK 231
>gi|406929115|gb|EKD64789.1| hypothetical protein ACD_50C00306G0002, partial [uncultured
bacterium]
Length = 342
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/238 (50%), Positives = 166/238 (69%), Gaps = 10/238 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
QK A+RLA+ Q+ +GK S++ L S + VI TG++ LDLALGIGGLP+GRIVE
Sbjct: 4 QKIQAIRLAMDQIEKQYGKGSIMKLGDKQ-SVKVDVIPTGAIALDLALGIGGLPRGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG EASGKTTLALHV+ EAQK GG A++D E+ALDP+ AE +G++ ++LL++QPDS E
Sbjct: 63 IYGPEASGKTTLALHVVAEAQKRGGQAAFIDAEHALDPARAETIGVNLDDLLLSQPDSGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + +TL +SG++DVIVVDSVAAL+P+ E+ + Q+R+M+QALRK+ ++
Sbjct: 123 QALEITETLIRSGALDVIVVDSVAALVPRAELEGEMGDAVMGLQARLMSQALRKLTGAIS 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRM---DEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
+S T++IF NQ+R Q +G M E T GG ALKFY+++RL + + K D
Sbjct: 183 KSKTILIFTNQLR------QKIGVMFGNPETTPGGLALKFYSSIRLDIRKIDTIKEGD 234
>gi|127512147|ref|YP_001093344.1| recombinase A [Shewanella loihica PV-4]
gi|166220679|sp|A3QC87.1|RECA_SHELP RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|126637442|gb|ABO23085.1| recA protein [Shewanella loihica PV-4]
Length = 353
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 161/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL L Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KEKALSAVLGQIEKQFGKGSIMKL----GENRSMDVETISTGSLSLDVALGAGGLPLGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLEVIAAAQREGKVCAFIDAEHALDPIYAQKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K ++V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDREEV 238
>gi|89902707|ref|YP_525178.1| recombination protein RecA [Rhodoferax ferrireducens T118]
gi|89347444|gb|ABD71647.1| recA protein [Rhodoferax ferrireducens T118]
Length = 384
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/235 (48%), Positives = 164/235 (69%), Gaps = 3/235 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL++AL+Q+ FGK +++ L V+STGSL LD+ALG+GGLP+GR+VE
Sbjct: 38 EKAKALQVALAQIEKQFGKGTIMRLGEGEVIEDIQVVSTGSLGLDIALGVGGLPRGRVVE 97
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI E QK GG CA++D E+ALD A+ +G++ ++LLI+QPD+ E
Sbjct: 98 IYGPESSGKTTLTLQVIAEMQKTGGQCAFIDAEHALDIQYAQNLGVNLQDLLISQPDTGE 157
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L +VD+L +SG++D+IVVDSVAAL PK E+ + Q+R+M+QALRK+ +
Sbjct: 158 QALEIVDSLVRSGAVDLIVVDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTAHIK 217
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
+++ ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D
Sbjct: 218 KTNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGTIKKGD 269
>gi|50122291|ref|YP_051458.1| recombinase A [Pectobacterium atrosepticum SCRI1043]
gi|59798238|sp|Q6D1S8.1|RECA_ERWCT RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|49612817|emb|CAG76267.1| RecA protein (recombinase A) [Pectobacterium atrosepticum SCRI1043]
Length = 357
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 161/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L Q++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K ++V
Sbjct: 183 LKQANTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKEGEEV 238
>gi|260427837|ref|ZP_05781816.1| protein RecA [Citreicella sp. SE45]
gi|260422329|gb|EEX15580.1| protein RecA [Citreicella sp. SE45]
Length = 359
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 162/243 (66%), Gaps = 3/243 (1%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D K + AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGLP
Sbjct: 10 DSKKNADRQKALDSALAQIERQFGKGSIMKLGGDNAMKDIEATSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRI+EIYG E+SGKTTL LHV+ E QK GG CA++D E+ALDP A+ +G+D + LLI+
Sbjct: 70 KGRIIEIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVDLDELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG++ ++VVDSVAAL PK E+ + +R+M+QA+RK
Sbjct: 130 QPDTGEQALEITDTLVRSGAVSLVVVDSVAALTPKSELEGDMGDSSVGVHARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFY+++RL + R K
Sbjct: 190 LTGSISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGSIKDR 246
Query: 299 DKV 301
D+V
Sbjct: 247 DEV 249
>gi|149184397|ref|ZP_01862715.1| recombinase A [Erythrobacter sp. SD-21]
gi|148831717|gb|EDL50150.1| recombinase A [Erythrobacter sp. SD-21]
Length = 341
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/239 (49%), Positives = 164/239 (68%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
+ AL AL+Q+ FGK S + L G + ISTGSL LD+ALGIGGLPKGR+
Sbjct: 5 RQKALDAALAQIDRAFGKGSAMKL----GQKEAMNVEAISTGSLGLDIALGIGGLPKGRV 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+E+YG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G+D + L+++QPD+
Sbjct: 61 IEVYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPVYAKKLGVDVDELIVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +S +ID++VVDSVAAL+P+ EI + + Q+R+M+Q+LRK+ S
Sbjct: 121 GEQALEITDTLVRSNAIDILVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGS 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 181 INRSKCMVIFINQLRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRTGQIKDRDEV 236
>gi|390565874|ref|ZP_10246452.1| Recombinase A (recA) [Nitrolancetus hollandicus Lb]
gi|390170888|emb|CCF85791.1| Recombinase A (recA) [Nitrolancetus hollandicus Lb]
Length = 344
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 161/232 (69%), Gaps = 3/232 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+++ A+ LA++Q+ FG+ S++ + + I TGS+ LDLALG+GG+P+GRI E
Sbjct: 3 EREKAIDLAIAQIERQFGRGSIMRMGEDATRLQIETIPTGSIALDLALGVGGIPRGRITE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTLA H+I EAQKLGG AY+D E+A DP AE G++ + LLI+QPD+ E
Sbjct: 63 IYGPESSGKTTLAQHIIAEAQKLGGVAAYVDAEHAFDPIYAERCGVNLDELLISQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + +TL +SG+IDV+V+DSVAAL+P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 123 QALEIAETLVRSGAIDVVVIDSVAALVPRAEIDGDMGDSHVGLQARLMSQALRKLTGAIS 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+S T +IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 183 RSRTAVIFINQLRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRAEAIK 231
>gi|340755232|ref|ZP_08691928.1| recA [Fusobacterium sp. D12]
gi|340573547|gb|EFS22670.2| recA [Fusobacterium sp. D12]
Length = 348
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/236 (49%), Positives = 162/236 (68%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL A+ ++ DFG+ +++ L + VI TGSL LD ALG+GG+P+GR+VEI
Sbjct: 6 KQKALETAVKEITKDFGEGAIMKLGDN-SHMQIEVIPTGSLNLDAALGLGGVPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+I EAQK+GG A++D E+ALDP A+A+G+D + LLIAQPD E
Sbjct: 65 YGAESSGKTTIALHIIAEAQKMGGIAAFIDAEHALDPVYAKALGVDIDELLIAQPDFGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDVIVVDSVAAL+PK EI ++ Q+R+M++ALRK+ +L +
Sbjct: 125 ALDIADTLVRSGAIDVIVVDSVAALVPKVEIDGEMSDQQMGLQARLMSKALRKLTATLNK 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S T +IF+NQ+R G G G T+GG ALKFY+++R+ + R K + V
Sbjct: 185 SKTTMIFINQIR-EKIGGFGFGPQT-TTTGGKALKFYSSVRMEVKRIAAVKQGEDV 238
>gi|402757854|ref|ZP_10860110.1| recombinase A [Acinetobacter sp. NCTC 7422]
Length = 348
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 160/236 (67%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKNGGTCAFIDAEHALDPEYARKLGVDIDNLLVSQPDHGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|283456289|ref|YP_003360853.1| RecA protein [Bifidobacterium dentium Bd1]
gi|306822508|ref|ZP_07455886.1| recombination protein A [Bifidobacterium dentium ATCC 27679]
gi|309801448|ref|ZP_07695575.1| RecA protein [Bifidobacterium dentium JCVIHMP022]
gi|283102923|gb|ADB10029.1| RecA protein [Bifidobacterium dentium Bd1]
gi|304554053|gb|EFM41962.1| recombination protein A [Bifidobacterium dentium ATCC 27679]
gi|308221963|gb|EFO78248.1| RecA protein [Bifidobacterium dentium JCVIHMP022]
Length = 386
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/235 (51%), Positives = 161/235 (68%), Gaps = 10/235 (4%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEI 125
AL AL+Q+ +FGK S + L G R VI TGSL LD+ALGIGGLPKGRIVEI
Sbjct: 27 ALETALAQVEKNFGKGSAMRL----GDRPEQDVEVIPTGSLALDMALGIGGLPKGRIVEI 82
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALHV+ AQK GG A++D E+ALDP A +G+D ++L+++QPD+ E
Sbjct: 83 YGPESSGKTTLALHVVANAQKKGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGEQ 142
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+ +L Q
Sbjct: 143 ALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQ 202
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
+ T IF+NQ+R K G G E T+GG ALKFYA++R+ + R + K D+
Sbjct: 203 AGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYASVRMDIRRIQTIKNGDE 254
>gi|406038827|ref|ZP_11046182.1| recombinase A [Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 348
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 159/236 (67%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALNAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL P+ EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRVGQVKEGDEI 236
>gi|373499005|ref|ZP_09589500.1| protein recA [Fusobacterium sp. 12_1B]
gi|371959703|gb|EHO77380.1| protein recA [Fusobacterium sp. 12_1B]
Length = 345
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/243 (47%), Positives = 165/243 (67%), Gaps = 9/243 (3%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLP 118
++ +K+ AL LA+ Q+ DFG+ S++ L G + VISTGS+ LD ALG+GG+P
Sbjct: 12 EVSEKEKALELAMKQIKKDFGEGSIMKL----GDNQEMNIEVISTGSINLDAALGLGGVP 67
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GR+VEIYG E+SGKTT+ALH+ EAQK GG A++D E+ALDP A+A+G+D + LLI+
Sbjct: 68 RGRVVEIYGAESSGKTTIALHIAAEAQKAGGIVAFIDAEHALDPVYAKALGVDVDELLIS 127
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD E L + D L +SG++D I+VDSVAAL+PK EI + Q+R+M++ALRK
Sbjct: 128 QPDYGEQALEIADMLVRSGAVDAIIVDSVAALVPKVEIDGEMGDQQMGLQARLMSKALRK 187
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ +L +S T +IF+NQ+R G G G T+GG ALKFY+++R+ + R K
Sbjct: 188 LTATLNKSKTTMIFINQIR-DKIGGFGFGPQT-TTTGGKALKFYSSVRMEVKRIGSVKQG 245
Query: 299 DKV 301
D+V
Sbjct: 246 DEV 248
>gi|255318935|ref|ZP_05360160.1| protein RecA [Acinetobacter radioresistens SK82]
gi|262378327|ref|ZP_06071484.1| recA protein [Acinetobacter radioresistens SH164]
gi|255303952|gb|EET83144.1| protein RecA [Acinetobacter radioresistens SK82]
gi|262299612|gb|EEY87524.1| recA protein [Acinetobacter radioresistens SH164]
Length = 348
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 160/236 (67%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALNAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL P+ EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|148887231|emb|CAM12782.1| recombinase A [Ochrobactrum thiophenivorans]
Length = 259
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/201 (55%), Positives = 147/201 (73%), Gaps = 3/201 (1%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLPKGRI+EIYG E+SGKTTLALH I EAQK GG CA++D E+AL
Sbjct: 8 VPTGSLSLDIALGVGGLPKGRIIEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHAL 67
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+V+DSVAAL P+ EI +
Sbjct: 68 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEM 127
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALK 280
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+R K G G E T+GGNALK
Sbjct: 128 GDSLPGLQARLMSQALRKLTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALK 184
Query: 281 FYAALRLRMMRTRLFKIADKV 301
FYA++RL + R K D+V
Sbjct: 185 FYASVRLDIRRIGSIKERDEV 205
>gi|132232|sp|P26346.1|RECA_PROVU RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|6006603|emb|CAB56804.1| recA [Proteus vulgaris]
Length = 325
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 161/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L Q++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K ++V
Sbjct: 183 LKQANTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDGEEV 238
>gi|126729802|ref|ZP_01745615.1| recombinase A [Sagittula stellata E-37]
gi|126709921|gb|EBA08974.1| recombinase A [Sagittula stellata E-37]
Length = 349
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 161/243 (66%), Gaps = 3/243 (1%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D + K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGLP
Sbjct: 2 DSKRNADKQKALDSALAQIERQFGKGSIMKLGGENAIKDIEATSTGSLGLDIALGIGGLP 61
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRI+EIYG E+SGKTTL LHV+ E QK GG CA++D E+ALDP A +G+D + LLI+
Sbjct: 62 KGRIIEIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYARKLGVDLDELLIS 121
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG++ ++VVDSVAAL PK E+ + +R+M+QA+RK
Sbjct: 122 QPDTGEQALEITDTLVRSGAVSLVVVDSVAALTPKSELEGDMGDSSVGVHARLMSQAMRK 181
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFY+++RL + R K
Sbjct: 182 LTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGAIKDR 238
Query: 299 DKV 301
D+V
Sbjct: 239 DEV 241
>gi|373496208|ref|ZP_09586756.1| protein RecA [Fusobacterium sp. 12_1B]
gi|404368928|ref|ZP_10974275.1| protein RecA [Fusobacterium ulcerans ATCC 49185]
gi|371966119|gb|EHO83611.1| protein RecA [Fusobacterium sp. 12_1B]
gi|404288364|gb|EFS25058.2| protein RecA [Fusobacterium ulcerans ATCC 49185]
Length = 373
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 164/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K+ AL LA+ Q++ +FG S++ L S VISTGSL L++ALG+GG+P+GR++
Sbjct: 9 VSKEKALDLAIKQISKEFGDGSIMKLGDNL-SMHVEVISTGSLNLNMALGVGGVPRGRVI 67
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTT+ALH++ EAQK GG A++D E+ALDP A+A+G+D + LLI+QPD
Sbjct: 68 EVYGAESSGKTTIALHIVAEAQKAGGIAAFIDAEHALDPVYAKALGVDVDELLISQPDYG 127
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++D+IVVDSVAAL+PK EI + Q+R+M++ALRK+ SL
Sbjct: 128 EQALEIADMLVRSNAVDIIVVDSVAALVPKVEIDGEMGDQQMGLQARLMSKALRKLTASL 187
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S T ++F+NQ+R G G G T+GG ALKFY+++RL + R K D+V
Sbjct: 188 NKSKTTMVFINQIR-DKIGGFGFGPQT-TTTGGKALKFYSSVRLEVKRIGSVKQGDEV 243
>gi|445445406|ref|ZP_21443105.1| RecA protein [Acinetobacter baumannii WC-A-92]
gi|444761225|gb|ELW85639.1| RecA protein [Acinetobacter baumannii WC-A-92]
Length = 349
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/236 (49%), Positives = 160/236 (67%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG C ++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKSGGTCGFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|403059641|ref|YP_006647858.1| recA protein [Pectobacterium carotovorum subsp. carotovorum PCC21]
gi|402806967|gb|AFR04605.1| recA protein [Pectobacterium carotovorum subsp. carotovorum PCC21]
Length = 357
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 161/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L Q++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K ++V
Sbjct: 183 LKQANTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKEGEEV 238
>gi|261820429|ref|YP_003258535.1| recombinase A [Pectobacterium wasabiae WPP163]
gi|261604442|gb|ACX86928.1| recA protein [Pectobacterium wasabiae WPP163]
gi|385870604|gb|AFI89124.1| Protein recA [Pectobacterium sp. SCC3193]
Length = 357
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 161/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L Q++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K ++V
Sbjct: 183 LKQANTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDGEEV 238
>gi|253689582|ref|YP_003018772.1| recA protein [Pectobacterium carotovorum subsp. carotovorum PC1]
gi|259563340|sp|C6DCR1.1|RECA_PECCP RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|251756160|gb|ACT14236.1| recA protein [Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 357
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 161/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L Q++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K ++V
Sbjct: 183 LKQANTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKEGEEV 238
>gi|61097707|emb|CAI38698.1| recombinase A [Chromobacterium piscinae]
Length = 285
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/226 (50%), Positives = 158/226 (69%), Gaps = 3/226 (1%)
Query: 76 QLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTT 135
Q+ FGK S++ + + V+STGSL LDLALG+GGLP+GR+VEIYG E+SGKTT
Sbjct: 1 QIEKQFGKGSIMRMSDNQINENLQVVSTGSLTLDLALGVGGLPRGRVVEIYGPESSGKTT 60
Query: 136 LALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTK 195
L L + E QKLGG CAY+D ENALDP A+ +G+ ++LLI+QPD+ E L + D L +
Sbjct: 61 LCLQAVAEMQKLGGTCAYIDAENALDPQYAQKLGVKVDDLLISQPDTGEQALEICDMLVR 120
Query: 196 SGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQ 255
S +D+IV+DSVAAL+PK EI + + Q+R+M+QALRK+ ++ +++TL+IF+NQ
Sbjct: 121 SSGVDLIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRTNTLVIFINQ 180
Query: 256 VRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+R K G G E T+GGNALKFYA++RL + RT K ++V
Sbjct: 181 IRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGGIKKGEEV 223
>gi|365824587|ref|ZP_09366661.1| recA [Actinomyces graevenitzii C83]
gi|365259647|gb|EHM89632.1| recA [Actinomyces graevenitzii C83]
Length = 394
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/249 (48%), Positives = 165/249 (66%), Gaps = 14/249 (5%)
Query: 55 DEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLAL 112
++P D AK AL LAL+Q+ +FGK S++ R R PV I TGS+ LD+AL
Sbjct: 4 NQPQDRAK------ALSLALAQIDKNFGKGSVM---RLGDDTRPPVAVIPTGSVALDVAL 54
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
G+GGLP+GR+VEIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A +G+D
Sbjct: 55 GVGGLPRGRVVEIYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPEYARKLGVDV 114
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
+NLL++QPD+ E L + D L +SG +D+IV+DSVAAL+PK EI + + Q+R+M
Sbjct: 115 DNLLVSQPDTGEQALEIADMLIRSGGLDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLM 174
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRT 292
+QALRKI +L + T IF+NQ+R K G G E T+GG ALKFYA++R+ + R
Sbjct: 175 SQALRKITGALSATGTTAIFINQLR--EKIGVFFGS-PETTTGGKALKFYASVRIDIRRI 231
Query: 293 RLFKIADKV 301
K D+
Sbjct: 232 GALKDGDQT 240
>gi|329896396|ref|ZP_08271495.1| RecA protein [gamma proteobacterium IMCC3088]
gi|328921816|gb|EGG29187.1| RecA protein [gamma proteobacterium IMCC3088]
Length = 345
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 164/238 (68%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL+Q+ FGK +++ R S R P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 5 KQKALEAALAQIERQFGKGTVM---RMGDSERVAIPSISTGSLGLDIALGIGGLPKGRIC 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI EAQKLGG A++D E+ALDP AE +G+ ++L+++QPD+
Sbjct: 62 EIYGPESSGKTTLTLQVIAEAQKLGGTAAFIDAEHALDPIYAERLGVQVDDLILSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L V + L +SG++DV+VVDSVAAL PK EI + + Q+R+++QA+RK+ S+
Sbjct: 122 EQALEVTEMLVRSGAVDVLVVDSVAALTPKAEIEGDMGDSHVGLQARLLSQAMRKLTGSI 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
Q++ L+IF+NQ+R K G G E T+GGNALKFY+++RL + R K D++
Sbjct: 182 KQTNCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGAVKEGDEI 236
>gi|83955443|ref|ZP_00964074.1| recombinase A [Sulfitobacter sp. NAS-14.1]
gi|83840087|gb|EAP79262.1| recombinase A [Sulfitobacter sp. NAS-14.1]
Length = 348
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 163/243 (67%), Gaps = 3/243 (1%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D+ K +K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGLP
Sbjct: 2 DNKKQAEKQKALDSALAQIERQFGKGSIMKLGAEGAIQDIKASSTGSLGLDIALGIGGLP 61
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
GRI+EIYG E+SGKTTL LH + E QK GG CA++D E+ALDP A +G+D + LLI+
Sbjct: 62 MGRIIEIYGPESSGKTTLTLHCVAEQQKNGGVCAFVDAEHALDPQYARKLGVDIDELLIS 121
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+++++VVDSVAAL PK E+ + Q+R+M+QA+RK
Sbjct: 122 QPDTGEQALEITDTLVRSGAVNMVVVDSVAALTPKSELEGDMGDSSVGVQARLMSQAMRK 181
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFY+++RL + R K
Sbjct: 182 LTGSISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGALKDR 238
Query: 299 DKV 301
D+V
Sbjct: 239 DEV 241
>gi|373112777|ref|ZP_09527004.1| protein recA [Fusobacterium necrophorum subsp. funduliforme
1_1_36S]
gi|371654917|gb|EHO20278.1| protein recA [Fusobacterium necrophorum subsp. funduliforme
1_1_36S]
Length = 348
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/236 (49%), Positives = 162/236 (68%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL A+ ++ DFG+ +++ L + VI TGSL LD ALG+GG+P+GR+VEI
Sbjct: 6 KQKALETAVKEITKDFGEGAIMKLGDN-SHMQIEVIPTGSLNLDAALGLGGVPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+I EAQK+GG A++D E+ALDP A+A+G+D + LLIAQPD E
Sbjct: 65 YGAESSGKTTIALHIIAEAQKMGGIAAFIDAEHALDPVYAKALGVDIDELLIAQPDFGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDVIVVDSVAAL+PK EI ++ Q+R+M++ALRK+ +L +
Sbjct: 125 ALDIADTLVRSGAIDVIVVDSVAALVPKVEIDGEMSDQQMGLQARLMSKALRKLTATLNK 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S T +IF+NQ+R G G G T+GG ALKFY+++R+ + R K + V
Sbjct: 185 SKTTMIFINQIR-EKIGGFGFGPQT-TTTGGKALKFYSSVRMEVKRIAAVKQGEDV 238
>gi|391358436|gb|AFM43751.1| recombination protein A, partial [Mesorhizobium sp. CCBAU 41403]
gi|391358438|gb|AFM43752.1| recombination protein A, partial [Mesorhizobium sp. CCBAU 41350]
gi|391358440|gb|AFM43753.1| recombination protein A, partial [Mesorhizobium sp. CCBAU 41335]
Length = 261
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/201 (55%), Positives = 148/201 (73%), Gaps = 3/201 (1%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLP+GRI+EIYG E+SGKTTLALH + EAQK GG CA++D E+AL
Sbjct: 18 VPTGSLGLDIALGVGGLPRGRIIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHAL 77
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 78 DPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 137
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALK 280
Q+R+M+QALRK+ S+ +S+T++IF+NQ+R K G G E T+GGNALK
Sbjct: 138 GDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALK 194
Query: 281 FYAALRLRMMRTRLFKIADKV 301
FYA++RL + R K D+V
Sbjct: 195 FYASVRLDIRRIGSVKDRDEV 215
>gi|358011907|ref|ZP_09143717.1| recombinase A [Acinetobacter sp. P8-3-8]
Length = 348
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 159/236 (67%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALNAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAVDMIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 184 SNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQVKEGDEI 236
>gi|295395410|ref|ZP_06805609.1| recombination protein A [Brevibacterium mcbrellneri ATCC 49030]
gi|294971732|gb|EFG47608.1| recombination protein A [Brevibacterium mcbrellneri ATCC 49030]
Length = 350
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 156/233 (66%), Gaps = 8/233 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
K AL ALSQ+ +GK S++ R R P+ I TGSL LD+ALGIGGLP+GR++
Sbjct: 15 KQKALETALSQVERQYGKGSIM---RLGSQERQPIEAIPTGSLALDVALGIGGLPRGRVI 71
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTT+ALH + AQK GG A++D E+ALDP A +G+D + LL++QPD+
Sbjct: 72 EVYGPESSGKTTVALHAVANAQKAGGLAAFIDAEHALDPEYAAKLGVDTDQLLVSQPDTG 131
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG++D+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 132 EQALEIADMLIRSGALDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 191
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
S T IF+NQ+R K G G E TSGG ALKFYA++RL + R K
Sbjct: 192 AHSKTTAIFINQLR--EKVGVFFGS-PETTSGGKALKFYASVRLDVRRIETLK 241
>gi|83944500|ref|ZP_00956953.1| recombinase A [Sulfitobacter sp. EE-36]
gi|83844702|gb|EAP82586.1| recombinase A [Sulfitobacter sp. EE-36]
Length = 356
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 163/243 (67%), Gaps = 3/243 (1%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D+ K +K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGLP
Sbjct: 10 DNKKQAEKQKALDSALAQIERQFGKGSIMKLGAEGAIQDIKASSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
GRI+EIYG E+SGKTTL LH + E QK GG CA++D E+ALDP A +G+D + LLI+
Sbjct: 70 MGRIIEIYGPESSGKTTLTLHCVAEQQKNGGVCAFVDAEHALDPQYARKLGVDIDELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+++++VVDSVAAL PK E+ + Q+R+M+QA+RK
Sbjct: 130 QPDTGEQALEITDTLVRSGAVNMVVVDSVAALTPKSELEGDMGDSSVGVQARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFY+++RL + R K
Sbjct: 190 LTGSISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGALKDR 246
Query: 299 DKV 301
D+V
Sbjct: 247 DEV 249
>gi|383807189|ref|ZP_09962750.1| recombinase A [Candidatus Aquiluna sp. IMCC13023]
gi|383299619|gb|EIC92233.1| recombinase A [Candidatus Aquiluna sp. IMCC13023]
Length = 362
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/233 (50%), Positives = 158/233 (67%), Gaps = 8/233 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL AL+Q+ FGK S++ R R P+ ISTGS+ LD+ALGIGGLP+GRIV
Sbjct: 7 REKALDTALAQIDRQFGKGSVM---RLGSEERAPIASISTGSIALDVALGIGGLPRGRIV 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG EASGKTT+ALH I AQK GG A++D E+ALDP A +G+D + LL++QPD+
Sbjct: 64 EVYGPEASGKTTIALHAIASAQKAGGTAAFIDAEHALDPIYAAKLGVDIDALLVSQPDTG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SGSIDVIV+DSVAAL+P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 124 EQALEITDMLIRSGSIDVIVIDSVAALVPRAEIEGEMGDTHVGLQARLMSQALRKLTGAI 183
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+ T IF+NQ+R K G G E TSGG ALKFYA++RL + R K
Sbjct: 184 SNTDTTAIFINQLR--EKIGVFFGS-PETTSGGKALKFYASVRLDIRRIETLK 233
>gi|310777953|ref|YP_003966286.1| recA protein [Ilyobacter polytropus DSM 2926]
gi|309747276|gb|ADO81938.1| recA protein [Ilyobacter polytropus DSM 2926]
Length = 353
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/243 (47%), Positives = 165/243 (67%), Gaps = 9/243 (3%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLP 118
+I KD AL +A+ Q+ DFG+ S++ L G+ ISTGS+ +D+ALG+GG+P
Sbjct: 7 EIADKDKALEVAMKQIQKDFGEGSIMKL----GANTHMNVETISTGSIGIDMALGLGGVP 62
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GR+VEIYG E+ GKTT+ALH++ EAQK GG A++D E+ALDP+ A A+G+D + LLI+
Sbjct: 63 RGRVVEIYGAESCGKTTVALHIVAEAQKKGGIAAFIDAEHALDPAYARALGVDVDELLIS 122
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + D L +SG++DVIVVDSVAAL+PK EI + Q+R+M++ALRK
Sbjct: 123 QPDNGEQALEIGDMLVRSGAVDVIVVDSVAALVPKSEIEGEMGDQQMGLQARLMSKALRK 182
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ SL +S T +IF+NQ+R G G G T+GG ALKFY+++R+ + R K
Sbjct: 183 LTGSLNKSKTTMIFINQIREKI-GGFGFGPQT-TTTGGRALKFYSSVRMEIKRIGSVKQG 240
Query: 299 DKV 301
D V
Sbjct: 241 DNV 243
>gi|227114948|ref|ZP_03828604.1| recombinase A [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
gi|227329401|ref|ZP_03833425.1| recombinase A [Pectobacterium carotovorum subsp. carotovorum WPP14]
Length = 357
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 161/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L Q++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K ++V
Sbjct: 183 LKQANTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKEGEEV 238
>gi|170727678|ref|YP_001761704.1| recombinase A [Shewanella woodyi ATCC 51908]
gi|238688716|sp|B1KPS6.1|RECA_SHEWM RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|169813025|gb|ACA87609.1| recA protein [Shewanella woodyi ATCC 51908]
Length = 353
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 161/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL L Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KEKALNAVLGQIEKQFGKGSIMKL----GENRSMDVETISTGSLSLDVALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L +I AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLELIAAAQREGKVCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L Q++T++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 LKQTNTMLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKERDEV 238
>gi|421081332|ref|ZP_15542246.1| RecA protein [Pectobacterium wasabiae CFBP 3304]
gi|401704342|gb|EJS94551.1| RecA protein [Pectobacterium wasabiae CFBP 3304]
Length = 357
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 161/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L Q++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K ++V
Sbjct: 183 LKQANTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDGEEV 238
>gi|373454706|ref|ZP_09546570.1| protein recA [Dialister succinatiphilus YIT 11850]
gi|371935569|gb|EHO63314.1| protein recA [Dialister succinatiphilus YIT 11850]
Length = 352
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 113/237 (47%), Positives = 162/237 (68%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL A+ Q+ +FG S++ L VI TGSL LD+A+G+GG P+GR++E
Sbjct: 10 EKKKALESAMHQITKEFGAGSIMRLGDMGDKLDIDVIPTGSLALDIAVGVGGYPRGRVIE 69
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTLALH I EAQKLGG A++D E+ALDP A +G+D ++LLI+QPDS E
Sbjct: 70 IYGPESSGKTTLALHAIAEAQKLGGVAAFIDAEHALDPMYAHHLGVDTKDLLISQPDSGE 129
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
LS+ ++L +SG++D++V+DSVAAL+PK EI I+ Q+R+M++ALRK+ +
Sbjct: 130 QALSICESLVRSGAVDIVVIDSVAALVPKQEIEGDISDQSVGLQARLMSKALRKLTGIIS 189
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S T++IF+NQ+R K G G E T+GG ALKFYA++R+ + R K +V
Sbjct: 190 KSRTIVIFINQIR--EKVGVMFGN-PETTTGGRALKFYASMRIEIRRAEAIKSGTEV 243
>gi|294141936|ref|YP_003557914.1| recA protein [Shewanella violacea DSS12]
gi|293328405|dbj|BAJ03136.1| recA protein [Shewanella violacea DSS12]
Length = 352
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 161/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL LSQ+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KEKALNAVLSQIEKQFGKGSIMKL----GENRSMDVETISTGSLSLDVALGAGGLPLGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLEVIAAAQRQGRVCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L Q++T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 LKQTNTMLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKDRDEV 238
>gi|56459851|ref|YP_155132.1| recombinase A [Idiomarina loihiensis L2TR]
gi|76363333|sp|Q5QUB8.1|RECA_IDILO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|56178861|gb|AAV81583.1| RecA recombinase [Idiomarina loihiensis L2TR]
Length = 372
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/239 (49%), Positives = 165/239 (69%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
+ AL AL Q+ FGK S++ L G + +STGSL LD+ALGIGGLP GR+
Sbjct: 5 RQKALDAALGQIERQFGKGSIMRL----GDNQTLDIDSVSTGSLGLDIALGIGGLPFGRV 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTT+ L VI EAQK+G CA++D E+ALDP AEA+G++ ++LLI+QPD+
Sbjct: 61 VEIYGPESSGKTTMTLEVIAEAQKMGKTCAFVDAEHALDPIYAEALGVNVDDLLISQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++D+++VDSVAAL PK EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEICDMLVRSGAVDIVIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTSN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S+T+ IF+NQ+R K G G E T+GGNALKFY+++RL + RT K D+V
Sbjct: 181 IKKSNTMCIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRTGALKEGDEV 236
>gi|359459937|ref|ZP_09248500.1| recombinase A [Acaryochloris sp. CCMEE 5410]
Length = 356
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/238 (49%), Positives = 167/238 (70%), Gaps = 5/238 (2%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D++ +KD AL + L+Q+ FGK S++ L + IS+G+L LDLALG GGLP
Sbjct: 4 DNSTNSEKDKALGVVLNQIERTFGKGSIMRLGDAT-QMKVETISSGALTLDLALG-GGLP 61
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGR++EIYG E+SGKTTLALH I E Q+ GG A++D E+ALDP+ A A+G+D ENLL+A
Sbjct: 62 KGRVIEIYGPESSGKTTLALHAIAEVQRSGGIAAFVDAEHALDPTYASAVGVDTENLLVA 121
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E+ L +VD L +S ++D++V+DSVAAL+P+ EI + + Q+R+M+QALRK
Sbjct: 122 QPDTGESALEIVDQLVRSTAVDIVVIDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRK 181
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
I ++ ++ ++FLNQ+R K G G EVT+GGNALKFYA++RL + R + K
Sbjct: 182 ITGNIGRTGCTVVFLNQLR--QKIGVTYGN-PEVTTGGNALKFYASVRLDIRRIQTLK 236
>gi|320094021|ref|ZP_08025846.1| recombination protein A [Actinomyces sp. oral taxon 178 str. F0338]
gi|319979065|gb|EFW10583.1| recombination protein A [Actinomyces sp. oral taxon 178 str. F0338]
Length = 375
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 161/235 (68%), Gaps = 8/235 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL++ALSQ+ FGK S++ R R PV I TGSL LD+ALGIGGLP+GR++
Sbjct: 30 RNKALQVALSQIDKQFGKGSVM---RLGDDSRPPVQVIPTGSLALDVALGIGGLPRGRVI 86
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A A+G+D ++LL++QPD+
Sbjct: 87 EIYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTG 146
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 147 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 206
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ T IF+NQ+R K G G E T+GG ALKFYA++R+ + R K A
Sbjct: 207 SATGTTAIFINQLR--EKIGVFFGS-PETTTGGKALKFYASVRIDVRRIETLKEA 258
>gi|403251213|ref|ZP_10917565.1| RecA/RadA recombinase [actinobacterium SCGC AAA027-L06]
gi|402915468|gb|EJX36439.1| RecA/RadA recombinase [actinobacterium SCGC AAA027-L06]
Length = 371
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/260 (45%), Positives = 174/260 (66%), Gaps = 12/260 (4%)
Query: 40 NIHSLSSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG- 98
N +++SA P+ D + +D + + +L AL+Q+ FGK S++ + G R+
Sbjct: 4 NKSTMASANREPQEDKK--EDKRSSDRAKSLDTALAQIERQFGKGSVMKM----GDRKAV 57
Query: 99 --PVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDV 156
VI TGS+ LD+ALG+GGLP+GR+VEIYG E+SGKTT+ALH I AQK GG A++D
Sbjct: 58 AMEVIPTGSVALDIALGVGGLPRGRVVEIYGPESSGKTTVALHAIANAQKAGGIAAFIDA 117
Query: 157 ENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEI 216
E+ALDP A+ +G+D + LL++QPD+ E L ++D L +SG+ID++VVDSVAAL+P+ EI
Sbjct: 118 EHALDPEYAKKLGVDIDALLVSQPDTGEQALEIMDMLVRSGAIDIVVVDSVAALVPRAEI 177
Query: 217 GVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGG 276
+ + Q+R+M+QALRK+ +L QS+T IF+NQ+R K G G E T+GG
Sbjct: 178 EGEMGDSHMGLQARLMSQALRKMTGALHQSNTTAIFINQLR--DKIGVFFGS-PETTTGG 234
Query: 277 NALKFYAALRLRMMRTRLFK 296
ALKFYA++R+ + R K
Sbjct: 235 KALKFYASIRMDVRRIETLK 254
>gi|339627937|ref|YP_004719580.1| recA protein [Sulfobacillus acidophilus TPY]
gi|379007570|ref|YP_005257021.1| protein recA [Sulfobacillus acidophilus DSM 10332]
gi|339285726|gb|AEJ39837.1| recA protein [Sulfobacillus acidophilus TPY]
gi|361053832|gb|AEW05349.1| Protein recA [Sulfobacillus acidophilus DSM 10332]
Length = 343
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M ++ AL LAL+Q+ FGK S++ L + VI TG + LDLA+G+GGLP+GR+V
Sbjct: 3 MDREKALDLALAQIEKQFGKGSIMRLGQESTRTAIDVIPTGCITLDLAMGVGGLPRGRVV 62
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG+E+SGKTT+ALH I EAQK GG A++DVE+ALDP A +G++ ++LLI+QPD+
Sbjct: 63 EIYGQESSGKTTIALHAIAEAQKGGGVAAFIDVEHALDPLYASKLGVNLDDLLISQPDTG 122
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + + L +SG++D++V+DSVAAL+P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 123 EQALEIAEALVRSGAVDIVVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAI 182
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S T+ +F+NQ+R K G G E T GG ALKFYA++RL + R K ++V
Sbjct: 183 SKSRTIAVFINQLR--EKVGVMFGN-PETTPGGRALKFYASIRLEVRRVDSLKQGNEV 237
>gi|227591|prf||1707271D recA gene
Length = 324
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 161/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 6 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 61
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 62 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 121
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 122 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 181
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L Q++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K ++V
Sbjct: 182 LKQANTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDGEEV 237
>gi|420151065|ref|ZP_14658215.1| RecA protein [Actinomyces georgiae F0490]
gi|394772829|gb|EJF51746.1| RecA protein [Actinomyces georgiae F0490]
Length = 361
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 161/235 (68%), Gaps = 8/235 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL++ALSQ+ FGK S++ R R PV I TGSL LD+ALGIGGLP+GR++
Sbjct: 16 RNKALQVALSQIDKQFGKGSVM---RLGDDSRPPVQVIPTGSLALDVALGIGGLPRGRVI 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A A+G+D ++LL++QPD+
Sbjct: 73 EIYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 133 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 192
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ T IF+NQ+R K G G E T+GG ALKFYA++R+ + R K A
Sbjct: 193 SATGTTAIFINQLR--EKIGVFFGS-PETTTGGKALKFYASVRIDVRRIETLKEA 244
>gi|291618587|ref|YP_003521329.1| RecA [Pantoea ananatis LMG 20103]
gi|291153617|gb|ADD78201.1| RecA [Pantoea ananatis LMG 20103]
Length = 356
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 158/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG EASGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPEASGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKEGDNV 238
>gi|183601363|ref|ZP_02962733.1| recombinase A [Bifidobacterium animalis subsp. lactis HN019]
gi|219683419|ref|YP_002469802.1| recombinase A [Bifidobacterium animalis subsp. lactis AD011]
gi|241191138|ref|YP_002968532.1| recombinase A [Bifidobacterium animalis subsp. lactis Bl-04]
gi|241196544|ref|YP_002970099.1| recombinase A [Bifidobacterium animalis subsp. lactis DSM 10140]
gi|384191391|ref|YP_005577139.1| recombinase A [Bifidobacterium animalis subsp. lactis BB-12]
gi|384192537|ref|YP_005578284.1| recombinase A [Bifidobacterium animalis subsp. lactis CNCM I-2494]
gi|384194131|ref|YP_005579877.1| recombinase A, RecA protein [Bifidobacterium animalis subsp. lactis
BLC1]
gi|384195696|ref|YP_005581441.1| recombinase A [Bifidobacterium animalis subsp. lactis V9]
gi|387821003|ref|YP_006301046.1| recombinase A [Bifidobacterium animalis subsp. lactis B420]
gi|387822681|ref|YP_006302630.1| recombinase A [Bifidobacterium animalis subsp. lactis Bi-07]
gi|423679664|ref|ZP_17654540.1| recombinase A [Bifidobacterium animalis subsp. lactis BS 01]
gi|183218969|gb|EDT89610.1| recombinase A [Bifidobacterium animalis subsp. lactis HN019]
gi|219621069|gb|ACL29226.1| protein RecA [Bifidobacterium animalis subsp. lactis AD011]
gi|240249530|gb|ACS46470.1| recombinase A [Bifidobacterium animalis subsp. lactis Bl-04]
gi|240251098|gb|ACS48037.1| recombinase A [Bifidobacterium animalis subsp. lactis DSM 10140]
gi|289178883|gb|ADC86129.1| RecA [Bifidobacterium animalis subsp. lactis BB-12]
gi|295794127|gb|ADG33662.1| recombinase A [Bifidobacterium animalis subsp. lactis V9]
gi|340365274|gb|AEK30565.1| RecA [Bifidobacterium animalis subsp. lactis CNCM I-2494]
gi|345282990|gb|AEN76844.1| recombinase A, RecA protein [Bifidobacterium animalis subsp. lactis
BLC1]
gi|366041308|gb|EHN17812.1| recombinase A [Bifidobacterium animalis subsp. lactis BS 01]
gi|386653704|gb|AFJ16834.1| RecA protein [Bifidobacterium animalis subsp. lactis B420]
gi|386655289|gb|AFJ18418.1| RecA protein [Bifidobacterium animalis subsp. lactis Bi-07]
Length = 382
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/265 (48%), Positives = 173/265 (65%), Gaps = 14/265 (5%)
Query: 39 MNIHSLSSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG 98
M S SS E E + P D K +++AL AL+Q+ FGK S + L G R
Sbjct: 1 MAARSKSSVKET-EKTEAPGVDKK---REDALNSALAQVEKQFGKGSAMRL----GDRPE 52
Query: 99 ---PVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLD 155
VI TGSL LD ALGIGGLP+GRIVEIYG E+SGKTTLALHV+ AQK GG A++D
Sbjct: 53 QDIEVIPTGSLALDTALGIGGLPRGRIVEIYGPESSGKTTLALHVVANAQKNGGVAAFID 112
Query: 156 VENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCE 215
E+ALDP A +G+D ++L+++QPD+ E L + D L +SG++DVIV+DSVAAL+PK E
Sbjct: 113 AEHALDPVYARHLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAE 172
Query: 216 IGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSG 275
I + + Q+R+M+QALRK+ +L Q++T IF+NQ+R K G G E T+G
Sbjct: 173 IEGDMGDSHVGLQARLMSQALRKMTGALAQANTTAIFINQLR--EKIGVFFGS-PETTTG 229
Query: 276 GNALKFYAALRLRMMRTRLFKIADK 300
G ALKFYA++R+ + R + K D+
Sbjct: 230 GKALKFYASVRMDIRRIQTLKDKDE 254
>gi|330444009|ref|YP_004376995.1| recA protein [Chlamydophila pecorum E58]
gi|197091910|gb|ACH42162.1| RecA [Chlamydophila pecorum E58]
gi|328807119|gb|AEB41292.1| recA protein [Chlamydophila pecorum E58]
Length = 348
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 163/238 (68%), Gaps = 3/238 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL A++ + FG S++SL + + VI TG+L LDLALGIGG+PKGRIVEI
Sbjct: 6 RKKALEAAIAYIEKQFGSGSVMSLGKHSATHEISVIKTGALSLDLALGIGGVPKGRIVEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTLA H++ AQK GG AY+D E+ALDPS A +G++ ++L+I+QPD E+
Sbjct: 66 FGPESSGKTTLATHIVANAQKKGGIAAYIDAEHALDPSYAALIGVNVDDLMISQPDCGED 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
LS+ + L +SG++DV+V+DSVAAL+PK E+ I ++ Q+R+M+QALRK+ +L +
Sbjct: 126 ALSIAELLARSGAVDVLVIDSVAALVPKSELEGDIGDVHVGLQARMMSQALRKLTSTLAR 185
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNI 303
S T IF+NQ+R K G G E T+GG ALKFY+++RL + R K D +I
Sbjct: 186 SQTCAIFINQIR--EKIGVSFGN-PETTTGGRALKFYSSIRLDIRRIGSIKSNDSSDI 240
>gi|219669130|ref|YP_002459565.1| recA protein [Desulfitobacterium hafniense DCB-2]
gi|219539390|gb|ACL21129.1| recA protein [Desulfitobacterium hafniense DCB-2]
Length = 346
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 161/231 (69%), Gaps = 3/231 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL +ALSQ+ FGK S++ L VI TG L +D+ALG+GG+P+GR++EI
Sbjct: 6 KLKALDMALSQIEKQFGKGSIMRLGEASAKMAVEVIPTGCLAIDIALGVGGVPRGRVIEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+ EAQKLGG A++D E+ALDP A+A+G++ +NLL++QPD+ E
Sbjct: 66 YGPESSGKTTVALHIAAEAQKLGGVAAFIDAEHALDPVYAKALGVNIDNLLVSQPDTGEQ 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG+IDVI++DSVAAL+P+ EI + + +R+M+QALRK+ ++ +
Sbjct: 126 ALEICEALVRSGAIDVIIIDSVAALVPRAEIEGEMGDSHVGLHARLMSQALRKLTGAISK 185
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
S+T +IF+NQ+R K G G E T+GG ALKFYA++RL + R K
Sbjct: 186 SNTCVIFINQIR--EKVGIMFGN-PETTTGGRALKFYASVRLEVRRADTLK 233
>gi|282890378|ref|ZP_06298906.1| hypothetical protein pah_c016o106 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338174001|ref|YP_004650811.1| recombinase A [Parachlamydia acanthamoebae UV-7]
gi|281499760|gb|EFB42051.1| hypothetical protein pah_c016o106 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336478359|emb|CCB84957.1| protein recA [Parachlamydia acanthamoebae UV-7]
Length = 357
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/239 (47%), Positives = 163/239 (68%), Gaps = 3/239 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
++ AL LA+S + FG +++SL R VI TG+L LD+ALGIGG+P+GRI+E
Sbjct: 8 ERKKALDLAVSHIKKQFGDGAIMSLGSHSSMREISVIKTGALTLDVALGIGGIPRGRIIE 67
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
I+G E+SGK+TLA H++ AQK GG AY+D E+ALDPS A +G++ + LLI+QPDS E
Sbjct: 68 IFGPESSGKSTLATHIVANAQKAGGLAAYIDAEHALDPSYAAKIGVNVDELLISQPDSGE 127
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L++ +TL +S ++DVIV+DSVAAL+PK E+ I + Q+R+M+QALRK+ +L
Sbjct: 128 EALNIAETLARSNAVDVIVIDSVAALVPKSELEGEIGDSFIGLQARMMSQALRKLAATLA 187
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNI 303
+S+T IF+NQ+R K G G E T+GG ALKFY+++RL + RT K D +
Sbjct: 188 KSNTCAIFINQIR--EKIGVMFGN-PETTTGGRALKFYSSIRLDIRRTAGIKGPDNSEV 243
>gi|451946028|ref|YP_007466623.1| protein RecA [Desulfocapsa sulfexigens DSM 10523]
gi|451905376|gb|AGF76970.1| protein RecA [Desulfocapsa sulfexigens DSM 10523]
Length = 346
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 165/243 (67%), Gaps = 8/243 (3%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGS--RRGPVISTGSLKLDLALGIGGLP 118
A K+ ++ A+SQ+ FGK S++ R G+ + PV+STGSL LD+ALG+GG P
Sbjct: 2 ATAKDKEGSVDNAISQIQRQFGKGSIM---RLGGATVEKIPVVSTGSLSLDIALGVGGFP 58
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRI EIYG E+SGKTTLALH + EAQK GG A++D E+ALD + A+ +G+D +NLL++
Sbjct: 59 KGRIAEIYGPESSGKTTLALHAVAEAQKKGGTAAFIDAEHALDTAYAQRLGVDVDNLLVS 118
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD E L + + L +SG +D+IV+DSVAAL+PK EI + + Q+R+M+QA+RK
Sbjct: 119 QPDFGEQALDIAEILIRSGGVDIIVIDSVAALVPKAEIDGNVGDSHMGLQARLMSQAMRK 178
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
L +S+T++IF+NQ+R K G G E T+GGNALKFY++LRL + R K
Sbjct: 179 FTGVLSRSNTILIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSLRLDIRRIGSLKDG 235
Query: 299 DKV 301
+V
Sbjct: 236 QEV 238
>gi|239787275|emb|CAX83753.1| RecA bacterial DNA recombination protein [uncultured bacterium]
Length = 348
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/237 (48%), Positives = 164/237 (69%), Gaps = 4/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+++ AL A+ Q+ FGK +++ + + PV+STGSL LD+ALGIGGLP+GR+VE
Sbjct: 6 EREKALEAAIGQIERQFGKGAIMRMDGDI-TVDVPVVSTGSLGLDIALGIGGLPRGRVVE 64
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG EASGKTTLALHV E Q++GG A++D E+ALDP+ A +G+ + LL++QPD+ E
Sbjct: 65 IYGPEASGKTTLALHVAAEVQRVGGVAAFVDAEHALDPAYARKLGVKVDQLLLSQPDTGE 124
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++D++VVDSVAAL PK EI + + Q+R+M+QALRK+ S+
Sbjct: 125 QGLEITDMLVRSGAVDLVVVDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTGSIS 184
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S +++F+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 185 RSKAIVLFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRNAPIKEKDEV 238
>gi|83589927|ref|YP_429936.1| recA protein [Moorella thermoacetica ATCC 39073]
gi|83572841|gb|ABC19393.1| RecA protein [Moorella thermoacetica ATCC 39073]
Length = 348
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/239 (47%), Positives = 162/239 (67%), Gaps = 3/239 (1%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
I +K AL +ALSQ+ FGK S++ L ISTG+L LDLALG+GGLP+GR+
Sbjct: 6 INEKQRALEMALSQIERHFGKGSIMRLGETGARLNVEAISTGALPLDLALGVGGLPRGRV 65
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTT+ALHVI EAQ+ GG A++D E+ALDP A +G+D +NLL++QPD+
Sbjct: 66 IEIFGPESSGKTTVALHVIAEAQRAGGTAAFIDAEHALDPVYAHNLGVDTDNLLVSQPDT 125
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG+IDVIV+DSVAAL+P+ E+ + + Q+R+M+QALRK+
Sbjct: 126 GEQALEIAEALVRSGAIDVIVIDSVAALVPRAELEGEMGDAHVGLQARLMSQALRKLAGI 185
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S T+ IF+NQ+R K G G E T GG ALKFYA++RL + + K ++
Sbjct: 186 ISKSRTVAIFINQLR--EKVGVLFGN-PETTPGGRALKFYASVRLDVRKVEQLKAGTEI 241
>gi|378765970|ref|YP_005194431.1| recombinase A [Pantoea ananatis LMG 5342]
gi|386016889|ref|YP_005935185.1| protein RecA [Pantoea ananatis AJ13355]
gi|386078227|ref|YP_005991752.1| recombinase A RecA [Pantoea ananatis PA13]
gi|327394967|dbj|BAK12389.1| protein RecA [Pantoea ananatis AJ13355]
gi|354987408|gb|AER31532.1| recombinase A RecA [Pantoea ananatis PA13]
gi|365185444|emb|CCF08394.1| recombinase A [Pantoea ananatis LMG 5342]
Length = 356
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 158/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG EASGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPEASGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKEGDNV 238
>gi|442768426|gb|AGC70164.1| recombinase A, partial [Xenorhabdus sp. SF80]
Length = 296
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 160/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 4 KQKALAAALGQIEKQFGKGSIMRL----GENRSMDVETISTGSLSLDIALGAGGLPMGRI 59
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 60 VEIYGPESSGKTTLTLQVIAAAQREGRTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDT 119
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L++SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 120 GEQALEICDALSRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 179
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 180 LKNSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGSVKNGDEV 235
>gi|89894689|ref|YP_518176.1| hypothetical protein DSY1943 [Desulfitobacterium hafniense Y51]
gi|423074673|ref|ZP_17063398.1| RecA protein [Desulfitobacterium hafniense DP7]
gi|89334137|dbj|BAE83732.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361854362|gb|EHL06433.1| RecA protein [Desulfitobacterium hafniense DP7]
Length = 346
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 161/231 (69%), Gaps = 3/231 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL +ALSQ+ FGK S++ L VI TG L +D+ALG+GG+P+GR++EI
Sbjct: 6 KLKALDMALSQIEKQFGKGSIMRLGEASAKMAVEVIPTGCLAIDIALGVGGVPRGRVIEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+ EAQKLGG A++D E+ALDP A+A+G++ +NLL++QPD+ E
Sbjct: 66 YGPESSGKTTVALHIAAEAQKLGGVAAFIDAEHALDPVYAKALGVNIDNLLVSQPDTGEQ 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG+IDVI++DSVAAL+P+ EI + + +R+M+QALRK+ ++ +
Sbjct: 126 ALEICEALVRSGAIDVIIIDSVAALVPRAEIEGEMGDSHVGLHARLMSQALRKLTGAISK 185
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
S+T +IF+NQ+R K G G E T+GG ALKFYA++RL + R K
Sbjct: 186 SNTCVIFINQIR--EKVGIMFGN-PETTTGGRALKFYASVRLEVRRADTLK 233
>gi|171742631|ref|ZP_02918438.1| hypothetical protein BIFDEN_01744 [Bifidobacterium dentium ATCC
27678]
gi|171278245|gb|EDT45906.1| RecA protein [Bifidobacterium dentium ATCC 27678]
Length = 451
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 161/236 (68%), Gaps = 10/236 (4%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEI 125
AL AL+Q+ +FGK S + L G R VI TGSL LD+ALGIGGLPKGRIVEI
Sbjct: 92 ALETALAQVEKNFGKGSAMRL----GDRPEQDVEVIPTGSLALDMALGIGGLPKGRIVEI 147
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALHV+ AQK GG A++D E+ALDP A +G+D ++L+++QPD+ E
Sbjct: 148 YGPESSGKTTLALHVVANAQKKGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGEQ 207
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+ +L Q
Sbjct: 208 ALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQ 267
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ T IF+NQ+R K G G E T+GG ALKFYA++R+ + R + K D+
Sbjct: 268 AGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYASVRMDIRRIQTIKNGDEA 320
>gi|363889769|ref|ZP_09317123.1| RecA protein [Eubacteriaceae bacterium CM5]
gi|361966308|gb|EHL19228.1| RecA protein [Eubacteriaceae bacterium CM5]
Length = 371
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 167/240 (69%), Gaps = 2/240 (0%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
+++ K AL L+++ DFGK +++ L ISTGS+ LD A+G+GGLPKGR
Sbjct: 12 EVVDKKKALEDVLARIEKDFGKGAIMLLGENT-KMNVETISTGSVGLDKAIGVGGLPKGR 70
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTT+ALH + EAQK+GG A++D E+ALDP A+A+G+D ++LLI+QPD
Sbjct: 71 IIEIYGPESSGKTTVALHCVAEAQKVGGSAAFIDAEHALDPVYAKALGVDIDSLLISQPD 130
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D L +SG +D++VVDSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 131 TGEQALEITDVLVRSGGVDIVVVDSVAALVPKSEIEGDMGDTFIGLQARLMSQALRKLAG 190
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S T++IF+NQ+R + S G G +E T+GG ALKFY+++RL + R K +++
Sbjct: 191 HINRSKTIVIFINQLRANINS-VGFGGPNETTTGGRALKFYSSIRLDVRRIGSVKQGEEI 249
>gi|315604454|ref|ZP_07879520.1| recombination protein A [Actinomyces sp. oral taxon 180 str. F0310]
gi|315314160|gb|EFU62211.1| recombination protein A [Actinomyces sp. oral taxon 180 str. F0310]
Length = 363
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 160/235 (68%), Gaps = 8/235 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL +ALSQ+ FGK S++ R R PV I TGSL LD+ALGIGGLP+GR++
Sbjct: 16 RNKALEVALSQIDKQFGKGSVM---RLGDDNRPPVQVIPTGSLALDVALGIGGLPRGRVI 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A A+G+D ++LL++QPD+
Sbjct: 73 EIYGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 133 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 192
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ T IF+NQ+R K G G E T+GG ALKFYA++R+ + R K A
Sbjct: 193 SATGTTAIFINQLR--EKIGVFFGS-PETTTGGKALKFYASVRIDVRRIETLKEA 244
>gi|34557830|ref|NP_907645.1| recombinase A [Wolinella succinogenes DSM 1740]
gi|60393634|sp|Q7M8Q1.1|RECA_WOLSU RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|34483548|emb|CAE10545.1| RECA PROTEIN [Wolinella succinogenes]
Length = 350
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/240 (50%), Positives = 165/240 (68%), Gaps = 21/240 (8%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV-----ISTGSLKLDLALGIGGLPKG 120
K A+ LA+ Q+ FGK +++ L G + PV ISTGSL LD+ALGIGG+P+G
Sbjct: 7 KRKAIDLAIKQIDKAFGKGALVRL----GEK--PVEKIDSISTGSLGLDIALGIGGIPQG 60
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EIYG E+SGKTTLAL VI E QK GG CA++D E+ALD S A+ +G+DAENLL++QP
Sbjct: 61 RIIEIYGPESSGKTTLALQVIAECQKKGGICAFIDAEHALDVSYAKRLGVDAENLLVSQP 120
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D E L +++TLT+SG++D+IVVDSVAAL PK EI + + Q+R+M+QALRK+
Sbjct: 121 DYGEQALEILETLTRSGAVDLIVVDSVAALTPKSEIDGDMGDQHVGLQARLMSQALRKVT 180
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMD----EVTSGGNALKFYAALRLRMMRTRLFK 296
L + +T +IF+NQ+R +G M E T+GGNALKFYA++R+ + R K
Sbjct: 181 GVLHKMNTTVIFINQIRMK------IGMMGYGSPETTTGGNALKFYASVRIDVRRIASLK 234
>gi|451982594|ref|ZP_21930903.1| Recombinase RecA [Nitrospina gracilis 3/211]
gi|451760240|emb|CCQ92201.1| Recombinase RecA [Nitrospina gracilis 3/211]
Length = 360
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 163/236 (69%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL LA SQ+ FGK S++ L + +++ I TGSL LD LGIGG+P+GR++EI
Sbjct: 7 KEKALDLAFSQIEKQFGKGSIMKLGQGE-AQKVATIPTGSLSLDAVLGIGGVPRGRVIEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG EASGKT+L LH+I EAQK GG A++D E+ALDP A +G++ E+LL++QPD+ E
Sbjct: 66 YGPEASGKTSLTLHIIAEAQKAGGVAAFIDAEHALDPQYARNLGVNLEDLLLSQPDTGEQ 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG++DVIV+DSVAAL+PK E+ + + Q+R+M+QA+RK+ + +
Sbjct: 126 TLEIAEVLVRSGAVDVIVIDSVAALVPKAELDGEMGDSHMGLQARLMSQAMRKLTGVINK 185
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S T +IF+NQ+R K G G E T+GGNALKFY+++RL + R K DKV
Sbjct: 186 SRTALIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRISALKDGDKV 238
>gi|50955213|ref|YP_062501.1| recombinase A [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50951695|gb|AAT89396.1| recombination repairing protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 374
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 119/243 (48%), Positives = 163/243 (67%), Gaps = 9/243 (3%)
Query: 56 EPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALG 113
EPH + ++ AL AL+Q+ FGK S++ R R PV + TGS+ LD+ALG
Sbjct: 15 EPHMPSP-ADREKALVTALAQIDRQFGKGSVM---RLGSDERAPVEVVPTGSIALDVALG 70
Query: 114 IGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAE 173
IGGLP+GRIVEIYG E+SGKTTL LH I AQ+ GG A++D E+ALDP A +G+D +
Sbjct: 71 IGGLPRGRIVEIYGPESSGKTTLTLHAIANAQRAGGIAAFIDAEHALDPDYARKLGVDID 130
Query: 174 NLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMT 233
LL++QPD+ E L + D L +SGSID+IV+DSVAAL+P+ EI + + Q+R+M+
Sbjct: 131 ALLVSQPDTGEQALEIADMLVRSGSIDLIVIDSVAALVPRAEIEGEMGDAHVGLQARLMS 190
Query: 234 QALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTR 293
QALRK+ +L Q++T +IF+NQ+R K G G E T+GG ALKFYA++RL + R
Sbjct: 191 QALRKLTGALSQTNTTMIFINQLR--EKVGVFFGS-PETTAGGKALKFYASVRLDIRRIE 247
Query: 294 LFK 296
K
Sbjct: 248 TLK 250
>gi|392394096|ref|YP_006430698.1| protein RecA [Desulfitobacterium dehalogenans ATCC 51507]
gi|390525174|gb|AFM00905.1| protein RecA [Desulfitobacterium dehalogenans ATCC 51507]
Length = 346
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 161/231 (69%), Gaps = 3/231 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL +ALSQ+ FGK S++ L VI TG L +D+ALG+GG+P+GRI+EI
Sbjct: 6 KLKALDMALSQIEKQFGKGSIMRLGEASAKMAVEVIPTGCLAIDIALGVGGVPRGRIIEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+ EAQKLGG A++D E+ALDP A+A+G++ +NLL++QPD+ E
Sbjct: 66 YGPESSGKTTVALHIAAEAQKLGGVAAFIDAEHALDPVYAKALGVNIDNLLVSQPDTGEQ 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG+IDV+++DSVAAL+P+ EI + + +R+M+QALRK+ ++ +
Sbjct: 126 ALEICEALVRSGAIDVVIIDSVAALVPRAEIEGEMGDSHVGLHARLMSQALRKLTGAISK 185
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
S+T +IF+NQ+R K G G E T+GG ALKFYA++RL + R K
Sbjct: 186 SNTCVIFINQIR--EKVGIMFGN-PETTTGGRALKFYASVRLEVRRQDTLK 233
>gi|197284275|ref|YP_002150147.1| recombinase A [Proteus mirabilis HI4320]
gi|425067171|ref|ZP_18470287.1| protein recA [Proteus mirabilis WGLW6]
gi|425073316|ref|ZP_18476422.1| protein recA [Proteus mirabilis WGLW4]
gi|132231|sp|P11406.2|RECA_PROMI RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238693164|sp|B4EUV6.1|RECA_PROMH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|45632|emb|CAA33015.1| unnamed protein product [Proteus mirabilis]
gi|194681762|emb|CAR40963.1| protein RecA (recombinase A) [Proteus mirabilis HI4320]
gi|404595294|gb|EKA95839.1| protein recA [Proteus mirabilis WGLW4]
gi|404601466|gb|EKB01875.1| protein recA [Proteus mirabilis WGLW6]
Length = 355
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 127/253 (50%), Positives = 165/253 (65%), Gaps = 17/253 (6%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP+GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMNVETISTGSLSLDVALGAGGLPRGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIASAQREGKICAFIDAEHALDPIYAQKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L++SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALSRSGAVDVIVVDSVAALTPKAEIEGEIGDSHVGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
L S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 LKNSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGSVKNGDEV- 238
Query: 303 ILEVVNIGSMIRL 315
IGS R+
Sbjct: 239 ------IGSETRV 245
>gi|78185515|ref|YP_377950.1| recombinase A [Synechococcus sp. CC9902]
gi|123729905|sp|Q3AUV9.1|RECA_SYNS9 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|78169809|gb|ABB26906.1| RecA protein [Synechococcus sp. CC9902]
Length = 376
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/242 (50%), Positives = 165/242 (68%), Gaps = 8/242 (3%)
Query: 57 PHDDAKIM-QKDNALRLALSQLANDFGKESMLSLKRFFGSR-RGPVISTGSLKLDLALGI 114
P DA+ ++D AL L L Q+ +FGK S++ L SR R ISTG+L LDLALG
Sbjct: 10 PGSDARSSGERDKALNLVLGQIERNFGKGSIMRLGD--ASRMRVETISTGALTLDLALG- 66
Query: 115 GGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAEN 174
GG PKGR+VEIYG E+SGKTTL LH I E QK GG A++D E+ALDP A ++G+D EN
Sbjct: 67 GGYPKGRVVEIYGPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPHYAASLGVDVEN 126
Query: 175 LLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQ 234
LL++QPD+ E L +VD L +S ++D++V+DSVAAL P+ EI + + AQ+R+M+Q
Sbjct: 127 LLVSQPDTGEMALEIVDQLVRSAAVDIVVIDSVAALTPRSEIEGEMGDVSVGAQARLMSQ 186
Query: 235 ALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRL 294
A+RKI ++ +S +IFLNQ+R K G G E T+GGNALKFYA++RL + R +
Sbjct: 187 AMRKITGNIGKSGCTVIFLNQLRL--KIGVMYGN-PETTTGGNALKFYASVRLDIRRIQT 243
Query: 295 FK 296
K
Sbjct: 244 LK 245
>gi|386867274|ref|YP_006280268.1| recombinase A [Bifidobacterium animalis subsp. animalis ATCC 25527]
gi|385701357|gb|AFI63305.1| recombinase A [Bifidobacterium animalis subsp. animalis ATCC 25527]
Length = 382
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 128/265 (48%), Positives = 173/265 (65%), Gaps = 14/265 (5%)
Query: 39 MNIHSLSSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG 98
M S SS E E + P D K +++AL AL+Q+ FGK S + L G R
Sbjct: 1 MAARSKSSVKET-EKTEAPGVDKK---REDALNSALAQVEKQFGKGSAMRL----GDRPE 52
Query: 99 ---PVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLD 155
VI TGSL LD ALGIGGLP+GRIVEIYG E+SGKTTLALHV+ AQK GG A++D
Sbjct: 53 QDIEVIPTGSLALDTALGIGGLPRGRIVEIYGPESSGKTTLALHVVANAQKNGGVAAFID 112
Query: 156 VENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCE 215
E+ALDP A +G+D ++L+++QPD+ E L + D L +SG++DVIV+DSVAAL+PK E
Sbjct: 113 AEHALDPVYARHLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAE 172
Query: 216 IGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSG 275
I + + Q+R+M+QALRK+ +L Q++T IF+NQ+R K G G E T+G
Sbjct: 173 IEGDMGDSHVGLQARLMSQALRKMTGALAQANTTAIFINQLR--EKIGVFFGS-PETTTG 229
Query: 276 GNALKFYAALRLRMMRTRLFKIADK 300
G ALKFYA++R+ + R + K D+
Sbjct: 230 GKALKFYASVRMDIRRIQTLKDKDE 254
>gi|317049271|ref|YP_004116919.1| recA protein [Pantoea sp. At-9b]
gi|316950888|gb|ADU70363.1| recA protein [Pantoea sp. At-9b]
Length = 356
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 159/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKEGDEV 238
>gi|300722253|ref|YP_003711537.1| DNA strand exchange and recombination protein [Xenorhabdus
nematophila ATCC 19061]
gi|298286856|sp|Q9X5P5.2|RECA_XENNA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|297628754|emb|CBJ89332.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Xenorhabdus nematophila ATCC 19061]
Length = 358
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 160/240 (66%), Gaps = 10/240 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GR
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRL----GENRSMDVETISTGSLSLDIALGAGGLPMGR 61
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD
Sbjct: 62 IVEIYGPESSGKTTLTLQVIAAAQREGRTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPD 121
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D L++SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+
Sbjct: 122 TGEQALEICDALSRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAG 181
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+L S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 NLKNSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGSVKNGDEV 238
>gi|149688790|gb|ABR27806.1| RecA [Candidatus Pelagibacter ubique]
Length = 289
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 151/212 (71%), Gaps = 6/212 (2%)
Query: 93 FGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGG 149
G RR ISTGSL LD+ALGIGGLPKGR++E+YG E+SGKTTLAL V+ EAQK GG
Sbjct: 7 LGQRRAMDVESISTGSLSLDVALGIGGLPKGRVIEVYGPESSGKTTLALQVLAEAQKAGG 66
Query: 150 YCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAA 209
CA++D E+ALDP A+ +G+D E LLI+QPD+ E L + DTL KSGSI VIV+DSVAA
Sbjct: 67 ICAFIDAEHALDPIYAKKLGVDTEELLISQPDTGEQALEIADTLVKSGSISVIVIDSVAA 126
Query: 210 LIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRM 269
L P+ EI + + QSR+M+QALRK+ S+ ++T++IF+NQ+R K G G
Sbjct: 127 LTPRAEIEGEMGDHHVGLQSRLMSQALRKLTGSISSTNTMMIFINQIRM--KIGVMFGS- 183
Query: 270 DEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
E TSGGNALKFY+++R+ + R K +++
Sbjct: 184 PETTSGGNALKFYSSVRMDIRRIGAIKNGEEI 215
>gi|398345389|ref|ZP_10530092.1| recombinase A [Leptospira inadai serovar Lyme str. 10]
Length = 393
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/238 (48%), Positives = 163/238 (68%), Gaps = 7/238 (2%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
DD+K M A+ A++Q+ FGK S++ L + PVI TGSL LD+ALGIGG P
Sbjct: 42 DDSKKM----AIDQAMTQIEKQFGKGSIMRLGAASATNVMPVIPTGSLDLDIALGIGGYP 97
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
GRIVEIYG E+SGKTTL L I EAQK GG A++D E+ALDPS A+ +G++ E LL++
Sbjct: 98 LGRIVEIYGPESSGKTTLTLAAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNLEELLVS 157
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + ++L +S +ID+IVVDSVAAL+PK EI + + Q+R+M+QALRK
Sbjct: 158 QPDNGEEALEICESLVRSNAIDIIVVDSVAALVPKAEIEGDMGDAHMGLQARLMSQALRK 217
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+ ++ +S T+++F+NQ+R K G G E T+GGNALKFY+++RL + + K
Sbjct: 218 LTGTISKSRTVVVFINQIRM--KIGVMFGS-PETTTGGNALKFYSSIRLDIRKIETLK 272
>gi|354596471|ref|ZP_09014488.1| Protein recA [Brenneria sp. EniD312]
gi|353674406|gb|EHD20439.1| Protein recA [Brenneria sp. EniD312]
Length = 356
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 160/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIASAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L Q++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 LKQANTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGSIKEGDEV 238
>gi|335424601|ref|ZP_08553609.1| recombinase A [Salinisphaera shabanensis E1L3A]
gi|334888939|gb|EGM27234.1| recombinase A [Salinisphaera shabanensis E1L3A]
Length = 361
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/236 (49%), Positives = 161/236 (68%), Gaps = 4/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL ALSQ+ FGK S++ + S P IS+GSL LD+ALGIGG P+GR++EI
Sbjct: 5 RKKALAAALSQIERQFGKGSVMRMGDQDTSNI-PSISSGSLTLDIALGIGGYPRGRVIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L I E QK GG A++D E+ALDP+ AEA+G+D ENLLI+QPD+ E
Sbjct: 64 YGPESSGKTTLTLQAIAECQKAGGTAAFIDAEHALDPTYAEALGVDIENLLISQPDTGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +S ++D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 124 ALEIADMLVRSAAVDIVVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 183
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ T ++F+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 184 TGTTVMFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAIKKGDEV 236
>gi|381402650|ref|ZP_09927334.1| recombinase A [Pantoea sp. Sc1]
gi|380735849|gb|EIB96912.1| recombinase A [Pantoea sp. Sc1]
Length = 355
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 158/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKEGDNV 238
>gi|117928699|ref|YP_873250.1| recA protein [Acidothermus cellulolyticus 11B]
gi|166199593|sp|A0LV04.1|RECA_ACIC1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|117649162|gb|ABK53264.1| recA protein [Acidothermus cellulolyticus 11B]
Length = 345
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 118/238 (49%), Positives = 160/238 (67%), Gaps = 8/238 (3%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGP--VISTGSLKLDLALGIGGLP 118
A ++ AL A++Q+ GK S++ R R P VI TGS+ LD+ALGIGGLP
Sbjct: 2 AAAFDREKALEHAIAQIERAHGKGSLM---RLGDEARAPIDVIPTGSIALDVALGIGGLP 58
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRIVEIYG E+SGKTTLALH + AQ+ GG A++D E+ALDP A+ +G+D +NLL++
Sbjct: 59 RGRIVEIYGPESSGKTTLALHAVANAQRAGGIAAFIDAEHALDPEYAKKLGVDTDNLLVS 118
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+IDV+V+DSVAAL+P+ EI + + Q+R+M+QALRK
Sbjct: 119 QPDTGEQALEIADTLIRSGAIDVVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRK 178
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
I +L S T IF+NQ+R K G G E T+GG ALKFYA++RL + R K
Sbjct: 179 ITGALSHSGTTAIFINQLR--EKVGVFFGS-PETTTGGKALKFYASIRLDVRRIDTIK 233
>gi|119026042|ref|YP_909887.1| recombinase A [Bifidobacterium adolescentis ATCC 15703]
gi|118765626|dbj|BAF39805.1| protein recA (Recombinase A) [Bifidobacterium adolescentis ATCC
15703]
Length = 394
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 120/235 (51%), Positives = 160/235 (68%), Gaps = 10/235 (4%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEI 125
AL AL+Q+ FGK S + L G R VI TGSL LD+ALGIGGLPKGRIVEI
Sbjct: 40 ALDTALAQVEKSFGKGSAMRL----GDRPEQDVEVIPTGSLALDMALGIGGLPKGRIVEI 95
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALHV+ AQK GG A++D E+ALDP A +G+D ++L+++QPD+ E
Sbjct: 96 YGPESSGKTTLALHVVANAQKAGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGEQ 155
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+ +L Q
Sbjct: 156 ALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQ 215
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
+ T IF+NQ+R K G G E T+GG ALKFYA++R+ + R + K D+
Sbjct: 216 AGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYASVRMDIRRIQTIKNGDE 267
>gi|392552332|ref|ZP_10299469.1| recombinase A [Pseudoalteromonas spongiae UST010723-006]
Length = 349
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 119/239 (49%), Positives = 162/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ L G + ISTGSL +D+ALGIGGLP GRI
Sbjct: 5 KQKALTAALSQIERQFGKGSIMKL----GDSQALDVEAISTGSLGIDIALGIGGLPTGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQK G CA++D E+ALDP AE +G++ + LL++QPD+
Sbjct: 61 VEIYGPESSGKTTLTLQVIAAAQKEGKTCAFVDAEHALDPVYAEKLGVNVDELLVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DV++VDSVAAL PK EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEICDMLVRSGAVDVVIVDSVAALTPKAEIEGDMGDTHVGLQARLMSQALRKLTAN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S+TL IF+NQ+R K G G E T+GGNALKFY+++R+ + RT K D++
Sbjct: 181 IKRSNTLCIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRIDIRRTGSVKEGDEI 236
>gi|154488807|ref|ZP_02029656.1| hypothetical protein BIFADO_02115 [Bifidobacterium adolescentis
L2-32]
gi|154082944|gb|EDN81989.1| RecA protein [Bifidobacterium adolescentis L2-32]
Length = 380
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 160/236 (67%), Gaps = 10/236 (4%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEI 125
AL AL+Q+ FGK S + L G R VI TGSL LD+ALGIGGLPKGRIVEI
Sbjct: 26 ALDTALAQVEKSFGKGSAMRL----GDRPEQDVEVIPTGSLALDMALGIGGLPKGRIVEI 81
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALHV+ AQK GG A++D E+ALDP A +G+D ++L+++QPD+ E
Sbjct: 82 YGPESSGKTTLALHVVANAQKAGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGEQ 141
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+ +L Q
Sbjct: 142 ALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQ 201
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ T IF+NQ+R K G G E T+GG ALKFYA++R+ + R + K D+
Sbjct: 202 AGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYASVRMDIRRIQTIKNGDEA 254
>gi|410656957|ref|YP_006909328.1| RecA protein [Dehalobacter sp. DCA]
gi|410659997|ref|YP_006912368.1| RecA protein [Dehalobacter sp. CF]
gi|409019312|gb|AFV01343.1| RecA protein [Dehalobacter sp. DCA]
gi|409022353|gb|AFV04383.1| RecA protein [Dehalobacter sp. CF]
Length = 346
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 160/231 (69%), Gaps = 3/231 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL +ALSQ+ FGK +++ L ISTGSL LDLALG+GG+P+GR++E+
Sbjct: 6 KLKALDIALSQIEKQFGKGAIMKLGEASDRMAVETISTGSLALDLALGVGGVPRGRVIEV 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ LH+I EAQK GG A++D E+ALDP A A+G++ ++LL++QPD+ E
Sbjct: 66 YGPESSGKTTVTLHIIAEAQKTGGVAAFIDAEHALDPVYARALGVNVDDLLVSQPDTGEQ 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG++DV+V+DSVAAL+P+ EI + + +R+M+QALRK+ + +
Sbjct: 126 ALEICEALVRSGAVDVVVIDSVAALVPRAEIEGEMGDSHMGLHARLMSQALRKLTGCISK 185
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
SHT +IF+NQ+R K G G E T+GG ALKFYA++RL + + + K
Sbjct: 186 SHTCVIFINQIR--EKVGVMFGN-PETTTGGRALKFYASVRLEVKKQDVIK 233
>gi|339503372|ref|YP_004690792.1| recombinase A [Roseobacter litoralis Och 149]
gi|338757365|gb|AEI93829.1| protein RecA [Roseobacter litoralis Och 149]
Length = 359
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 116/240 (48%), Positives = 162/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGLP GR
Sbjct: 13 KSADKQKALDSALAQIERQFGKGSIMKLGTAGAVQDITASSTGSLGLDIALGIGGLPMGR 72
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTL LH + E QK GG CA++D E+ALDP+ A+ +GID + LLI+QPD
Sbjct: 73 IIEIYGPESSGKTTLTLHCVAEQQKAGGVCAFVDAEHALDPAYAKKLGIDLDELLISQPD 132
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++++++VDSVAAL PK E+ + Q+R+M+QA+RK+
Sbjct: 133 TGEQALEITDTLVRSGAVNMVIVDSVAALTPKSELEGDMGDSSVGVQARLMSQAMRKLTG 192
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+ ++IF+NQ+R K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 193 SISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGALKDRDEV 249
>gi|372275053|ref|ZP_09511089.1| recombinase A [Pantoea sp. SL1_M5]
gi|390437365|ref|ZP_10225903.1| recombinase A [Pantoea agglomerans IG1]
Length = 355
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 158/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIASAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKEGDNV 238
>gi|365848106|ref|ZP_09388586.1| RecA protein [Yokenella regensburgei ATCC 43003]
gi|364571500|gb|EHM49087.1| RecA protein [Yokenella regensburgei ATCC 43003]
Length = 357
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 12 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 67
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 68 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 127
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 128 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 187
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 188 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 243
>gi|363894591|ref|ZP_09321671.1| RecA protein [Eubacteriaceae bacterium ACC19a]
gi|361961990|gb|EHL15141.1| RecA protein [Eubacteriaceae bacterium ACC19a]
Length = 371
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 167/240 (69%), Gaps = 2/240 (0%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
+++ K AL L+++ DFGK +++ L ISTGS+ LD A+G+GGLPKGR
Sbjct: 12 EVVDKKKALEDVLARIEKDFGKGAIMLLGENT-KMNVETISTGSVGLDKAIGVGGLPKGR 70
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTT+ALH + EAQK+GG A++D E+ALDP A+A+G+D ++LLI+QPD
Sbjct: 71 IIEIYGPESSGKTTVALHCVAEAQKVGGSAAFIDAEHALDPVYAKALGVDIDSLLISQPD 130
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D L +SG +D++VVDSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 131 TGEQALEITDVLVRSGGVDIVVVDSVAALVPKSEIEGDMGDTFIGLQARLMSQALRKLAG 190
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S T++IF+NQ+R + S G G +E T+GG ALKFY+++RL + R K +++
Sbjct: 191 HINRSKTIVIFINQLRANINS-VGFGGPNETTTGGRALKFYSSIRLDVRRIGSVKQGEEI 249
>gi|375149472|ref|YP_005011913.1| protein recA [Niastella koreensis GR20-10]
gi|361063518|gb|AEW02510.1| Protein recA [Niastella koreensis GR20-10]
Length = 334
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 117/236 (49%), Positives = 164/236 (69%), Gaps = 4/236 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL+L + ++ DFGK S++ + + VISTGS+ LD+ALGIGGLPKGRIVE
Sbjct: 5 EKAKALKLTIDKIEKDFGKGSVMMMNEK-STEPMEVISTGSIGLDVALGIGGLPKGRIVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTT+A+HVI EAQK GG CA +D E+A D A+ +G+D +NLLI+QPD E
Sbjct: 64 IYGPESSGKTTIAIHVIAEAQKKGGMCAIIDAEHAFDSLYAKKLGVDVDNLLISQPDYGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L SG++DV+V+DSVAAL+PK E+ + Q+R+M+QALRK+ ++
Sbjct: 124 QALEIADRLILSGALDVVVIDSVAALVPKGELEGEMGDSKMGLQARLMSQALRKLTATIN 183
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
+++T+ IF+NQ+R K G G E T+GGNALKFYA++RL + R+ K D+
Sbjct: 184 KTNTICIFINQLR--EKIGVMFGN-PETTTGGNALKFYASVRLDIRRSAQIKDGDE 236
>gi|317059497|ref|ZP_07923982.1| recombinase A [Fusobacterium sp. 3_1_5R]
gi|313685173|gb|EFS22008.1| recombinase A [Fusobacterium sp. 3_1_5R]
Length = 359
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 163/237 (68%), Gaps = 5/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL A+ ++ DFG+ +++ L + VI TGSL LD ALG+GG+P+GR+VEI
Sbjct: 14 KQKALETAVKEITKDFGEGAIMKLGDN-SHMQIEVIPTGSLNLDAALGLGGVPRGRVVEI 72
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+I EAQK+GG A++D E+ALDP A+A+G+D + LLI+QPD E
Sbjct: 73 YGAESSGKTTIALHIIAEAQKMGGIAAFIDAEHALDPVYAKALGVDIDELLISQPDFGEQ 132
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDVIVVDSVAAL+PK EI ++ Q+R+M++ALRK+ +L +
Sbjct: 133 ALDIADTLVRSGAIDVIVVDSVAALVPKVEIDGEMSDQQMGLQARLMSKALRKLTATLNK 192
Query: 246 SHTLIIFLNQVRFSAKSGQ-GLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S T +IF+NQ+R K G G G T+GG ALKFY+++R+ + R K D V
Sbjct: 193 SKTTMIFINQIR--EKIGSFGFGPQT-TTTGGKALKFYSSVRMEVKRIASVKQGDDV 246
>gi|406965963|gb|EKD91547.1| hypothetical protein ACD_30C00002G0044 [uncultured bacterium]
Length = 366
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 117/245 (47%), Positives = 162/245 (66%), Gaps = 9/245 (3%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
D+ K NA+ A++Q+ +G S++ L VISTGS+ LDLALG+GGLPK
Sbjct: 11 DSSTDAKKNAIATAMAQIQKQYGSGSIMRLGERAERMATEVISTGSIALDLALGVGGLPK 70
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+EIYG EASGKTT+ LHVI EAQK GG A++D E+ALDP A+ +G++ ++LLI+Q
Sbjct: 71 GRIIEIYGPEASGKTTVCLHVIAEAQKKGGVAAFIDAEHALDPQRAQKIGVNLDDLLISQ 130
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + D L +SG IDV+V+DSVAAL PK EI + Q+R+M+QALRK+
Sbjct: 131 PDTGEQGLEIADALIRSGGIDVLVIDSVAALTPKAEIEGEMGDAVMGMQARLMSQALRKL 190
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRM---DEVTSGGNALKFYAALRLRMMRTRLFK 296
++ ++T++IF NQ+R Q +G M E T+GG ALKFYA++RL + + K
Sbjct: 191 TGAISNTNTIVIFTNQLR------QKIGVMFGNPETTTGGQALKFYASVRLDVRKIENIK 244
Query: 297 IADKV 301
D V
Sbjct: 245 QGDVV 249
>gi|299144062|ref|ZP_07037142.1| protein RecA [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518547|gb|EFI42286.1| protein RecA [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 341
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 109/241 (45%), Positives = 170/241 (70%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
++K AL LA+SQ+ +GK S++ L G+ I TGSL LDL+LG+GG+PKG
Sbjct: 3 IEKKKALELAISQIEKQYGKGSIMKL----GADSKLDIETIPTGSLALDLSLGVGGIPKG 58
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+E+YG E+SGKTTLALH++ E+QK+GG A++D E+ALDPS A+ +G+D ENL+++QP
Sbjct: 59 RIIEVYGPESSGKTTLALHILAESQKMGGIGAFIDAEHALDPSYAKNLGVDVENLIVSQP 118
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L ++++L +S ++D+++VDSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 119 DTGEQALEIIESLVRSNAVDIVIVDSVAALVPKAEIEGEMGDSHIGLQARLMSQALRKLT 178
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
++ +S +IF+NQ+R K G G E T+GG ALKFY+++RL + + K+ ++
Sbjct: 179 GAINKSKASVIFINQLR--EKVGVMFGN-PETTTGGRALKFYSSIRLEIRKVENLKLGEE 235
Query: 301 V 301
+
Sbjct: 236 I 236
>gi|294790979|ref|ZP_06756137.1| protein RecA [Scardovia inopinata F0304]
gi|294458876|gb|EFG27229.1| protein RecA [Scardovia inopinata F0304]
Length = 368
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 164/243 (67%), Gaps = 10/243 (4%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGL 117
A+ Q+ AL AL+Q+ FGK S + L G + VI TGSL LD+ALGIGGL
Sbjct: 10 AQDAQRQAALNTALAQVEKAFGKGSAMRL----GDKPVTHVEVIPTGSLALDMALGIGGL 65
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
P+GRIVEI+G E+SGKTT+ALH + AQ+ GG A++D E+ALDP A +G+D ++L+I
Sbjct: 66 PRGRIVEIFGPESSGKTTIALHAVANAQRNGGVAAFIDAEHALDPEYARNLGVDTDSLII 125
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + D L +SG++D+IV+DSVAAL+PK EI + + Q+R+M+QALR
Sbjct: 126 SQPDNGEQALEIADMLIRSGALDIIVIDSVAALVPKAEIDGEMGDNHVGLQARLMSQALR 185
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKI 297
K+ +L QSHT +F+NQ+R K G G E T+GG ALKFYA++RL + R + K
Sbjct: 186 KMTGALSQSHTTAVFINQLR--EKIGVMFGN-PETTTGGKALKFYASVRLDIRRVQTLKN 242
Query: 298 ADK 300
D+
Sbjct: 243 GDE 245
>gi|254786787|ref|YP_003074216.1| recombinase A [Teredinibacter turnerae T7901]
gi|259563346|sp|C5BMR1.1|RECA_TERTT RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|237684795|gb|ACR12059.1| DNA recombinase RecA [Teredinibacter turnerae T7901]
Length = 342
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 124/253 (49%), Positives = 169/253 (66%), Gaps = 17/253 (6%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRR---GPVISTGSLKLDLALGIGGLPKGRI 122
K+ AL+ AL Q+ FGK +++ + G + P +STGSL LD+ALGIGGLPKGRI
Sbjct: 5 KEKALQAALQQIDRQFGKGTVMRM----GDKELEAIPAVSTGSLGLDVALGIGGLPKGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI EAQ+ GG CA++D E+ALDP A +G++ ++L+++QPD+
Sbjct: 61 VEIYGPESSGKTTLTLQVIAEAQRKGGTCAFVDAEHALDPIYAAKLGVNVDDLIVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L V D L +SG+IDV+VVDSVAAL PK EI + + Q+R+M+QALRKI +
Sbjct: 121 GEQALEVADMLVRSGAIDVLVVDSVAALTPKAEIEGEMGDHHVGLQARLMSQALRKITGN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+ ++ L IF+NQ+R K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 181 IKNANCLAIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRIGSVKDGDEV- 236
Query: 303 ILEVVNIGSMIRL 315
IGS R+
Sbjct: 237 ------IGSETRV 243
>gi|161502126|ref|YP_001569238.1| recombinase A [Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980]
gi|160863473|gb|ABX20096.1| hypothetical protein SARI_00143 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 358
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 12 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 67
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 68 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 127
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 128 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 187
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 188 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 243
>gi|220928127|ref|YP_002505036.1| recA protein [Clostridium cellulolyticum H10]
gi|219998455|gb|ACL75056.1| recA protein [Clostridium cellulolyticum H10]
Length = 347
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 115/239 (48%), Positives = 164/239 (68%), Gaps = 4/239 (1%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+++K AL +AL Q+ FGK +++ L +I TGS+ LDLALG+GG+P+GRI
Sbjct: 1 MLEKRKALEMALGQIEKQFGKGAVMKLGEN-SHMNVEIIPTGSMSLDLALGVGGVPRGRI 59
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEI+G E+SGKTT+ALH+I EAQK GG A++D E+ALDP A+ +G+D ENL+++QPD+
Sbjct: 60 VEIFGPESSGKTTVALHIIAEAQKAGGEAAFIDAEHALDPVYAKKLGVDIENLIVSQPDT 119
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG+IDVIVVDSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 120 GEQALEITEALVRSGAIDVIVVDSVAALVPKAEIDGEMGDSHIGLQARLMSQALRKLAGV 179
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S T IF+NQ+R K G G E T GG ALKFY+++RL + R K +++V
Sbjct: 180 ISKSRTTAIFINQLR--EKVGIMFGN-PETTPGGRALKFYSSVRLDVRRIEAIKQSNEV 235
>gi|114797171|ref|YP_761421.1| recA protein [Hyphomonas neptunium ATCC 15444]
gi|114737345|gb|ABI75470.1| recA protein [Hyphomonas neptunium ATCC 15444]
Length = 356
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 116/244 (47%), Positives = 167/244 (68%), Gaps = 12/244 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
+ K AL AL + FGK S++ L G ++ +STGSL LD+ALGIGGLPKG
Sbjct: 7 VDKQKALETALGNIERSFGKGSVMRL----GDKKTLDIEAVSTGSLGLDIALGIGGLPKG 62
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EI+G E+SGKTTL+LH + EAQK GG CA++D E+ALDP A +G+D ++LLI+QP
Sbjct: 63 RIIEIFGPESSGKTTLSLHCVAEAQKNGGVCAFIDAEHALDPVYASKLGVDLDDLLISQP 122
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG++D++V+DSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 123 DTGEQALEIADTLVRSGAVDLVVIDSVAALTPRAEIEGEMGDQLPGLQARLMSQALRKLT 182
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +S ++IF+NQ+R K G G E T+GGNALKFY+++RL + R+ +I D+
Sbjct: 183 GSISKSKCMVIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDI--RRIGQIKDR 237
Query: 301 VNIL 304
++
Sbjct: 238 EEVI 241
>gi|254242315|ref|ZP_04935637.1| RecA protein [Pseudomonas aeruginosa 2192]
gi|126195693|gb|EAZ59756.1| RecA protein [Pseudomonas aeruginosa 2192]
Length = 346
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 120/237 (50%), Positives = 160/237 (67%), Gaps = 6/237 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G C +DVE LDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKTGATCCSVDVEPPLDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 NANCLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 236
>gi|397905630|ref|ZP_10506474.1| RecA protein [Caloramator australicus RC3]
gi|397161313|emb|CCJ33809.1| RecA protein [Caloramator australicus RC3]
Length = 344
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/229 (51%), Positives = 162/229 (70%), Gaps = 6/229 (2%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIV 123
+K AL LA+SQ+ FGK S++ L S+ ISTGSL LD+ALGIGG+P+GRIV
Sbjct: 4 EKIKALELAISQIEKQFGKGSVMKLGE--NSKLNIEAISTGSLDLDIALGIGGVPRGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTT+ALH+I EAQKLGG A++D E+ALDP A+ +G+D ENL++AQPD+
Sbjct: 62 EIFGPESSGKTTVALHIIAEAQKLGGAAAFIDAEHALDPVYAKKLGVDIENLIVAQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + + L +SG+IDVIV+DSVAAL+PK EI + + Q+R+M+QALRK+ ++
Sbjct: 122 EQALEIAEALVRSGAIDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLAGAI 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRT 292
+S + IF+NQ+R K G G E T GG ALKFYA++RL + +
Sbjct: 182 NKSRCVAIFINQLR--EKVGVMFGN-PETTPGGRALKFYASVRLDVRKV 227
>gi|374995987|ref|YP_004971486.1| protein RecA [Desulfosporosinus orientis DSM 765]
gi|357214353|gb|AET68971.1| protein RecA [Desulfosporosinus orientis DSM 765]
Length = 346
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 163/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL +AL+Q+ FGK S++ L R VI TGSL LDLALG+GG+P+GRI+EI
Sbjct: 6 KLKALDIALAQIEKQFGKGSIMKLGDSTSDRFIEVIPTGSLALDLALGVGGVPRGRIIEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+I EAQKLGG A++D E+ALDP A+A+G++ + LL+AQPD+ E
Sbjct: 66 YGPESSGKTTVALHIIAEAQKLGGAAAFIDAEHALDPIYAKALGVNIDELLVAQPDTGEQ 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +S ++DV+V+DSVAAL+P+ EI + + +R+M+QALRK+ S+ +
Sbjct: 126 GLEICEALVRSAAVDVVVLDSVAALVPRAEIEGEMGDNHVGLHARLMSQALRKLTGSISK 185
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+T ++F+NQ+R K G G E T+GG ALKFYA++R+ + R K V
Sbjct: 186 SNTCVVFINQIR--EKIGVMFGN-PETTTGGRALKFYASIRMDIRRQEAIKSGQDV 238
>gi|442768428|gb|AGC70165.1| recombinase A, partial [Xenorhabdus sp. SF106-C]
Length = 296
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 160/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRL----GENRSMDVETISTGSLSLDIALGAGGLPMGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 61 VEIYGPESSGKTTLTLQVIAAAQREGRTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L++SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 121 GEQALEICDALSRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 181 LKNSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGSVKNGDEV 236
>gi|383641612|ref|ZP_09954018.1| recombinase A [Sphingomonas elodea ATCC 31461]
Length = 356
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/239 (49%), Positives = 166/239 (69%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL+Q+ FGK S + L GS+ ISTGSL LD+ALG+GGLP+GR+
Sbjct: 18 KQKALDAALAQIDRAFGKGSAMRL----GSKETMQVEAISTGSLGLDIALGVGGLPRGRV 73
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+E+YG E+SGKTTLALHVI EAQK GG A++D E+ALDP A+ +G++ + L+++QPD+
Sbjct: 74 IEVYGPESSGKTTLALHVIAEAQKNGGVAAFVDAEHALDPVYAKKLGVNIDELIVSQPDT 133
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+Q+LRK+ S
Sbjct: 134 GEQALEITDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGS 193
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D++
Sbjct: 194 ISRSRCMVIFINQLRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRTGQIKDRDEI 249
>gi|363891401|ref|ZP_09318580.1| protein RecA [Eubacteriaceae bacterium CM2]
gi|361965458|gb|EHL18440.1| protein RecA [Eubacteriaceae bacterium CM2]
Length = 371
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 167/240 (69%), Gaps = 2/240 (0%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
+++ K AL L+++ DFGK +++ L ISTGS+ LD A+G+GGLPKGR
Sbjct: 12 EVVDKKKALEDVLARIEKDFGKGAIMLLGENT-KMNVETISTGSVGLDKAIGVGGLPKGR 70
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTT+ALH + EAQK+GG A++D E+ALDP A+A+G+D ++LLI+QPD
Sbjct: 71 IIEIYGPESSGKTTVALHCVAEAQKVGGSAAFIDAEHALDPVYAKALGVDIDSLLISQPD 130
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D L +SG +D++VVDSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 131 TGEQALEITDVLVRSGGVDIVVVDSVAALVPKSEIEGDMGDTFIGLQARLMSQALRKLAG 190
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S T++IF+NQ+R + S G G +E T+GG ALKFY+++RL + R K +++
Sbjct: 191 HINRSKTVVIFINQLRANINS-VGFGGPNETTTGGRALKFYSSIRLDVRRIGSVKQGEEI 249
>gi|239946715|ref|ZP_04698468.1| protein RecA [Rickettsia endosymbiont of Ixodes scapularis]
gi|239920991|gb|EER21015.1| protein RecA [Rickettsia endosymbiont of Ixodes scapularis]
Length = 362
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 115/242 (47%), Positives = 169/242 (69%), Gaps = 12/242 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ A+ AL+Q+ +GK S++ L G R +STGSL LD+ALGIGG+PKGRI
Sbjct: 25 KERAIAAALTQIEKSYGKGSVMKL----GQRPNVDIEAVSTGSLGLDIALGIGGVPKGRI 80
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTL LH+I EAQK GG CA++D E+ALDP+ A+ +G++ + L+I+QPD+
Sbjct: 81 IEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDT 140
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +SG ID+I++DSVAAL+PK EI + +Q+R+M+QALRK+ S
Sbjct: 141 GEQALEIADTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 200
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+ +++ + +F+NQ+R K G G E T+GGNALKFYA++R+ + R+ I DK
Sbjct: 201 INRTNCITVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRIDI--RRIGSIKDKEE 255
Query: 303 IL 304
++
Sbjct: 256 VI 257
>gi|16761605|ref|NP_457222.1| recombinase A [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|16766135|ref|NP_461750.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|29143089|ref|NP_806431.1| recombinase A [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|62181332|ref|YP_217749.1| recombinase A [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161615727|ref|YP_001589692.1| recombinase A [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|167994128|ref|ZP_02575220.1| protein RecA [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168235857|ref|ZP_02660915.1| protein RecA [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168245260|ref|ZP_02670192.1| protein RecA [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168262060|ref|ZP_02684033.1| protein RecA [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|168464049|ref|ZP_02697966.1| protein RecA [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|168820488|ref|ZP_02832488.1| protein RecA [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194446772|ref|YP_002042070.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194451484|ref|YP_002046789.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194736708|ref|YP_002115781.1| recombinase A [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197250628|ref|YP_002147725.1| recombinase A [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197263607|ref|ZP_03163681.1| protein RecA [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|198241828|ref|YP_002216800.1| recombinase A [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|200386699|ref|ZP_03213311.1| protein RecA [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204928070|ref|ZP_03219270.1| protein RecA [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205353773|ref|YP_002227574.1| recombinase A [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207858093|ref|YP_002244744.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|213028317|ref|ZP_03342764.1| recombinase A [Salmonella enterica subsp. enterica serovar Typhi
str. 404ty]
gi|213051937|ref|ZP_03344815.1| recombinase A [Salmonella enterica subsp. enterica serovar Typhi
str. E00-7866]
gi|213426123|ref|ZP_03358873.1| recombinase A [Salmonella enterica subsp. enterica serovar Typhi
str. E02-1180]
gi|213579899|ref|ZP_03361725.1| recombinase A [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
gi|213648097|ref|ZP_03378150.1| recombinase A [Salmonella enterica subsp. enterica serovar Typhi
str. J185]
gi|224584607|ref|YP_002638405.1| recombinase A [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|238909595|ref|ZP_04653432.1| recombinase A [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|289824465|ref|ZP_06544041.1| recombinase A [Salmonella enterica subsp. enterica serovar Typhi
str. E98-3139]
gi|374981460|ref|ZP_09722787.1| RecA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|375115669|ref|ZP_09760839.1| recombinase A [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|375120292|ref|ZP_09765459.1| recombinase A [Salmonella enterica subsp. enterica serovar Dublin
str. SD3246]
gi|375124631|ref|ZP_09769795.1| recombinase A [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|378446186|ref|YP_005233818.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378451567|ref|YP_005238927.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|378700741|ref|YP_005182698.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378956449|ref|YP_005213936.1| recombinase A [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|378960886|ref|YP_005218372.1| hypothetical protein STBHUCCB_28700 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|378985418|ref|YP_005248574.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|378990154|ref|YP_005253318.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|379702081|ref|YP_005243809.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|383497504|ref|YP_005398193.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|386592518|ref|YP_006088918.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|409246498|ref|YP_006887202.1| Protein recA Recombinase A [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|416425092|ref|ZP_11692127.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416428274|ref|ZP_11693774.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416438730|ref|ZP_11699709.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416444999|ref|ZP_11704043.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416451726|ref|ZP_11708476.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416459696|ref|ZP_11714141.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416471521|ref|ZP_11719241.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416475512|ref|ZP_11720659.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416488622|ref|ZP_11725835.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416499447|ref|ZP_11730814.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416509051|ref|ZP_11736368.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416515261|ref|ZP_11738525.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416530104|ref|ZP_11744720.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416537193|ref|ZP_11748809.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416544801|ref|ZP_11753057.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416550927|ref|ZP_11756253.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416562794|ref|ZP_11762430.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416576945|ref|ZP_11769471.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416584963|ref|ZP_11774567.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416590576|ref|ZP_11777830.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416598025|ref|ZP_11782412.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416606619|ref|ZP_11787887.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416616496|ref|ZP_11794120.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416621842|ref|ZP_11796605.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416627131|ref|ZP_11799002.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416640358|ref|ZP_11804976.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416647451|ref|ZP_11808390.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416656583|ref|ZP_11813269.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416667827|ref|ZP_11818507.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416679151|ref|ZP_11822875.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416691444|ref|ZP_11826223.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416706279|ref|ZP_11831538.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416712042|ref|ZP_11835753.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416718238|ref|ZP_11840346.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416726822|ref|ZP_11846867.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416731054|ref|ZP_11848989.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416741152|ref|ZP_11854903.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416749477|ref|ZP_11859266.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416753631|ref|ZP_11860935.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416765268|ref|ZP_11868649.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416768828|ref|ZP_11870826.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|418482084|ref|ZP_13051107.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418488213|ref|ZP_13056077.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418493528|ref|ZP_13059994.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418501081|ref|ZP_13067471.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418505329|ref|ZP_13071675.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418510562|ref|ZP_13076841.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418512179|ref|ZP_13078422.1| recombinase A [Salmonella enterica subsp. enterica serovar Pomona
str. ATCC 10729]
gi|418524859|ref|ZP_13090844.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|418760333|ref|ZP_13316490.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35185]
gi|418764692|ref|ZP_13320787.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35199]
gi|418773022|ref|ZP_13329014.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21539]
gi|418774444|ref|ZP_13330413.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 33953]
gi|418779572|ref|ZP_13335471.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35188]
gi|418783879|ref|ZP_13339723.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21559]
gi|418787835|ref|ZP_13343634.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19447]
gi|418793502|ref|ZP_13349231.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19449]
gi|418799222|ref|ZP_13354889.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19567]
gi|418800551|ref|ZP_13356202.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35202]
gi|418806021|ref|ZP_13361595.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21550]
gi|418809926|ref|ZP_13365469.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22513]
gi|418816040|ref|ZP_13371534.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|418823623|ref|ZP_13379030.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|418827190|ref|ZP_13382348.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22462]
gi|418829907|ref|ZP_13384871.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM N18486]
gi|418836848|ref|ZP_13391730.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM N1543]
gi|418841831|ref|ZP_13396646.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21554]
gi|418847800|ref|ZP_13402541.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 37978]
gi|418852647|ref|ZP_13407346.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19593]
gi|418867302|ref|ZP_13421761.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 4176]
gi|419731892|ref|ZP_14258800.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419735514|ref|ZP_14262387.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419737097|ref|ZP_14263921.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419741683|ref|ZP_14268361.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419748190|ref|ZP_14274689.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|419787857|ref|ZP_14313559.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. Levine 1]
gi|419793531|ref|ZP_14319152.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. Levine 15]
gi|421360411|ref|ZP_15810687.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421363185|ref|ZP_15813427.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421369508|ref|ZP_15819683.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421370149|ref|ZP_15820316.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421379110|ref|ZP_15829189.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421383219|ref|ZP_15833257.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421385132|ref|ZP_15835155.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421390083|ref|ZP_15840059.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421396509|ref|ZP_15846434.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421399288|ref|ZP_15849183.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421405493|ref|ZP_15855323.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421409814|ref|ZP_15859603.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421415117|ref|ZP_15864853.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421417278|ref|ZP_15866988.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421420616|ref|ZP_15870292.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421428262|ref|ZP_15877873.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421430704|ref|ZP_15880290.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421435868|ref|ZP_15885404.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421440286|ref|ZP_15889766.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421443656|ref|ZP_15893095.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421449127|ref|ZP_15898511.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|421569894|ref|ZP_16015590.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421575114|ref|ZP_16020728.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421580455|ref|ZP_16026013.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421584141|ref|ZP_16029651.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|421886008|ref|ZP_16317189.1| recombinase A [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|422027039|ref|ZP_16373385.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422032073|ref|ZP_16378190.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427553708|ref|ZP_18928684.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427571264|ref|ZP_18933401.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427591972|ref|ZP_18938200.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427615171|ref|ZP_18943084.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427639401|ref|ZP_18947966.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427657060|ref|ZP_18952715.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427662371|ref|ZP_18957676.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427675896|ref|ZP_18962493.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|436614396|ref|ZP_20514084.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|436768334|ref|ZP_20520782.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|436799482|ref|ZP_20523768.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436807663|ref|ZP_20527706.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436818555|ref|ZP_20535188.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436832777|ref|ZP_20537067.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436852875|ref|ZP_20542900.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436861335|ref|ZP_20548519.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436867434|ref|ZP_20552588.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436872780|ref|ZP_20555662.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436880550|ref|ZP_20560309.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436891403|ref|ZP_20566103.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436899689|ref|ZP_20571100.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436903197|ref|ZP_20573661.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436914714|ref|ZP_20579561.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436919416|ref|ZP_20582197.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436928707|ref|ZP_20587913.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436938680|ref|ZP_20593467.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436945758|ref|ZP_20597586.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436955222|ref|ZP_20602097.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436965956|ref|ZP_20606625.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436969651|ref|ZP_20608648.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436985157|ref|ZP_20614742.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436994085|ref|ZP_20618654.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437004738|ref|ZP_20621968.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437022016|ref|ZP_20628144.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437027290|ref|ZP_20630179.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437043198|ref|ZP_20636711.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437050875|ref|ZP_20641020.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437062105|ref|ZP_20647471.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437067021|ref|ZP_20650083.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437073752|ref|ZP_20653194.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437082836|ref|ZP_20658579.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437096507|ref|ZP_20664872.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437110362|ref|ZP_20667708.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437118779|ref|ZP_20670514.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437129321|ref|ZP_20675797.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437135913|ref|ZP_20679551.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437145948|ref|ZP_20685737.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437153134|ref|ZP_20690240.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437158941|ref|ZP_20693529.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437168817|ref|ZP_20699255.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437176047|ref|ZP_20703223.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437184279|ref|ZP_20708144.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437200659|ref|ZP_20711723.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|437264527|ref|ZP_20719803.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437269613|ref|ZP_20722856.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437277825|ref|ZP_20727184.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437302050|ref|ZP_20733384.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437315657|ref|ZP_20737345.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437327488|ref|ZP_20740430.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437341557|ref|ZP_20744680.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437369097|ref|ZP_20749102.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437408211|ref|ZP_20752367.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437445559|ref|ZP_20758281.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437463162|ref|ZP_20762844.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437483924|ref|ZP_20769008.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437495678|ref|ZP_20772822.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437519256|ref|ZP_20778626.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437526982|ref|ZP_20779990.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437555799|ref|ZP_20784766.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437573999|ref|ZP_20789661.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437594207|ref|ZP_20795754.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437605292|ref|ZP_20799471.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437620335|ref|ZP_20804055.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437644633|ref|ZP_20808718.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437664754|ref|ZP_20814368.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437675419|ref|ZP_20816754.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437696162|ref|ZP_20822379.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437710954|ref|ZP_20826632.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437721553|ref|ZP_20829077.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437796056|ref|ZP_20837571.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437808260|ref|ZP_20839965.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437840983|ref|ZP_20846496.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|437864251|ref|ZP_20848041.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438010583|ref|ZP_20854477.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|438094876|ref|ZP_20861831.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438101499|ref|ZP_20864326.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438116099|ref|ZP_20870618.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|438121007|ref|ZP_20872115.1| recombinase A [Salmonella enterica subsp. enterica serovar Pullorum
str. ATCC 9120]
gi|440764319|ref|ZP_20943348.1| recombinase A [Salmonella enterica subsp. enterica serovar Agona
str. SH11G1113]
gi|440770298|ref|ZP_20949250.1| recombinase A [Salmonella enterica subsp. enterica serovar Agona
str. SH08SF124]
gi|440773000|ref|ZP_20951901.1| recombinase A [Salmonella enterica subsp. enterica serovar Agona
str. SH10GFN094]
gi|445145592|ref|ZP_21387554.1| recombinase A [Salmonella enterica subsp. enterica serovar Dublin
str. SL1438]
gi|445159873|ref|ZP_21393361.1| recombinase A [Salmonella enterica subsp. enterica serovar Dublin
str. HWS51]
gi|445162147|ref|ZP_21393711.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445185520|ref|ZP_21398973.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445220783|ref|ZP_21403037.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445244887|ref|ZP_21408138.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445336184|ref|ZP_21415626.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445351795|ref|ZP_21420528.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445364900|ref|ZP_21425057.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|452123347|ref|YP_007473595.1| recombinase A [Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
gi|54039032|sp|P65978.2|RECA_SALTI RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|54041792|sp|P65977.2|RECA_SALTY RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|76363339|sp|Q57KU4.3|RECA_SALCH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|189039605|sp|A9N0C5.1|RECA_SALPB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226723638|sp|B5F352.1|RECA_SALA4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226726276|sp|B5FSY0.1|RECA_SALDC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226726295|sp|B5QV78.1|RECA_SALEP RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226726296|sp|B5RDF4.1|RECA_SALG2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238690630|sp|B4TF13.1|RECA_SALHS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238693603|sp|B4T3A0.1|RECA_SALNS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238693680|sp|B4TT06.1|RECA_SALSV RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|254790444|sp|C0PWM2.1|RECA_SALPC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|25300503|pir||AH0843 RecA protein [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16421374|gb|AAL21709.1| DNA strand exchange and recombination protein [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|16503906|emb|CAD05935.1| RecA protein [Salmonella enterica subsp. enterica serovar Typhi]
gi|29138722|gb|AAO70291.1| recA protein [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|62128965|gb|AAX66668.1| DNA strand exchange and recombination protein with proteiase and
nuclease activity [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|109453380|gb|ABG34170.1| RecA [Salmonella enterica subsp. enterica]
gi|109453382|gb|ABG34171.1| RecA [Salmonella enterica subsp. enterica]
gi|109453384|gb|ABG34172.1| RecA [Salmonella enterica subsp. enterica]
gi|109453386|gb|ABG34173.1| RecA [Salmonella enterica subsp. enterica]
gi|109453388|gb|ABG34174.1| RecA [Salmonella enterica subsp. enterica]
gi|109453390|gb|ABG34175.1| RecA [Salmonella enterica subsp. enterica]
gi|109453392|gb|ABG34176.1| RecA [Salmonella enterica subsp. enterica]
gi|109453394|gb|ABG34177.1| RecA [Salmonella enterica subsp. enterica]
gi|109453396|gb|ABG34178.1| RecA [Salmonella enterica subsp. enterica]
gi|109453398|gb|ABG34179.1| RecA [Salmonella enterica subsp. enterica]
gi|109453400|gb|ABG34180.1| RecA [Salmonella enterica subsp. enterica]
gi|161365091|gb|ABX68859.1| hypothetical protein SPAB_03518 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194405435|gb|ACF65657.1| protein RecA [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194409788|gb|ACF70007.1| protein RecA [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194712210|gb|ACF91431.1| protein RecA [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195633723|gb|EDX52137.1| protein RecA [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197214331|gb|ACH51728.1| protein RecA [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197241862|gb|EDY24482.1| protein RecA [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197290652|gb|EDY30006.1| protein RecA [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197936344|gb|ACH73677.1| protein RecA [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|199603797|gb|EDZ02342.1| protein RecA [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204322392|gb|EDZ07589.1| protein RecA [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205273554|emb|CAR38541.1| Recombinase A [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205327960|gb|EDZ14724.1| protein RecA [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205335992|gb|EDZ22756.1| protein RecA [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205342838|gb|EDZ29602.1| protein RecA [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205349184|gb|EDZ35815.1| protein RecA [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|206709896|emb|CAR34249.1| Recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224469134|gb|ACN46964.1| recombinase A [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|261247965|emb|CBG25798.1| RecA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267994946|gb|ACY89831.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301159389|emb|CBW18907.1| RecA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312913847|dbj|BAJ37821.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|320087232|emb|CBY96997.1| Protein recA Recombinase A [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321223382|gb|EFX48448.1| RecA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|322614352|gb|EFY11283.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322621583|gb|EFY18436.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322624444|gb|EFY21277.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322628775|gb|EFY25558.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322633498|gb|EFY30240.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322635926|gb|EFY32634.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322639634|gb|EFY36319.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322646817|gb|EFY43320.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322650585|gb|EFY46990.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322654803|gb|EFY51122.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322659023|gb|EFY55276.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322664410|gb|EFY60604.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322668341|gb|EFY64498.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322673679|gb|EFY69780.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322677740|gb|EFY73803.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322681430|gb|EFY77462.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322683832|gb|EFY79842.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|322715815|gb|EFZ07386.1| recombinase A [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|323131180|gb|ADX18610.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|323193779|gb|EFZ78982.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323200249|gb|EFZ85331.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323203248|gb|EFZ88277.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323212793|gb|EFZ97604.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323216319|gb|EGA01046.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323221067|gb|EGA05498.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323226888|gb|EGA11070.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323230828|gb|EGA14946.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323234821|gb|EGA18907.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323238860|gb|EGA22910.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323241560|gb|EGA25591.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323248293|gb|EGA32229.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323251123|gb|EGA34996.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323255838|gb|EGA39586.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323263141|gb|EGA46679.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323264354|gb|EGA47860.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323271181|gb|EGA54609.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|326624559|gb|EGE30904.1| recombinase A [Salmonella enterica subsp. enterica serovar Dublin
str. SD3246]
gi|326628881|gb|EGE35224.1| recombinase A [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|332989701|gb|AEF08684.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|357207060|gb|AET55106.1| recombinase A [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|363551524|gb|EHL35841.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363551874|gb|EHL36186.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363563885|gb|EHL47951.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363564241|gb|EHL48298.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363567992|gb|EHL51988.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363572572|gb|EHL56463.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|366064381|gb|EHN28580.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366064817|gb|EHN29014.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366067053|gb|EHN31207.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366067636|gb|EHN31784.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366069938|gb|EHN34056.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366076153|gb|EHN40192.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366083686|gb|EHN47602.1| recombinase A [Salmonella enterica subsp. enterica serovar Pomona
str. ATCC 10729]
gi|366830428|gb|EHN57299.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372207718|gb|EHP21217.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|374354758|gb|AEZ46519.1| hypothetical protein STBHUCCB_28700 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|379984323|emb|CCF89462.1| recombinase A [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|380464325|gb|AFD59728.1| RecA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|381290523|gb|EIC31787.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381293838|gb|EIC34978.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381307136|gb|EIC48002.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381314944|gb|EIC55709.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|381315050|gb|EIC55813.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|383799559|gb|AFH46641.1| RecA protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|392616890|gb|EIW99318.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. Levine 15]
gi|392618793|gb|EIX01185.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. Levine 1]
gi|392730279|gb|EIZ87524.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21539]
gi|392742437|gb|EIZ99525.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35199]
gi|392742961|gb|EJA00039.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35185]
gi|392751256|gb|EJA08211.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 33953]
gi|392751985|gb|EJA08928.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35188]
gi|392756163|gb|EJA13061.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21559]
gi|392764196|gb|EJA20998.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19567]
gi|392764625|gb|EJA21423.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19449]
gi|392764744|gb|EJA21538.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19447]
gi|392782654|gb|EJA39285.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22513]
gi|392783425|gb|EJA40046.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21550]
gi|392783690|gb|EJA40305.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35202]
gi|392785614|gb|EJA42185.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|392790643|gb|EJA47137.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|392799970|gb|EJA56209.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM N1543]
gi|392800649|gb|EJA56880.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22462]
gi|392802701|gb|EJA58910.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM N18486]
gi|392807901|gb|EJA63964.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21554]
gi|392824307|gb|EJA80094.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 37978]
gi|392829051|gb|EJA84735.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19593]
gi|392839435|gb|EJA94975.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 4176]
gi|395980978|gb|EJH90200.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395981631|gb|EJH90852.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395987646|gb|EJH96808.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|395995445|gb|EJI04510.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|395995453|gb|EJI04517.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396007319|gb|EJI16275.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|396008963|gb|EJI17896.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396015142|gb|EJI24025.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396018764|gb|EJI27626.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396023567|gb|EJI32365.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396023747|gb|EJI32539.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396027382|gb|EJI36145.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396035152|gb|EJI43833.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396042113|gb|EJI50735.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396043661|gb|EJI52259.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396048297|gb|EJI56846.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396054530|gb|EJI63022.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396056280|gb|EJI64756.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396068421|gb|EJI76769.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|396069287|gb|EJI77625.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396070424|gb|EJI78752.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|402520211|gb|EJW27565.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402522766|gb|EJW30086.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402525930|gb|EJW33212.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402531481|gb|EJW38692.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|414015294|gb|EKS99110.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414016288|gb|EKT00061.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414016976|gb|EKT00726.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414029538|gb|EKT12695.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414031085|gb|EKT14160.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414034615|gb|EKT17540.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414044463|gb|EKT26905.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414044992|gb|EKT27419.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414050201|gb|EKT32382.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414057444|gb|EKT39198.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|434943347|gb|ELL49485.1| recombinase A [Salmonella enterica subsp. enterica serovar Pullorum
str. ATCC 9120]
gi|434959512|gb|ELL52958.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434963135|gb|ELL56261.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|434968076|gb|ELL60831.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|434968619|gb|ELL61371.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434971099|gb|ELL63660.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434981376|gb|ELL73263.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434984220|gb|ELL75960.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434985779|gb|ELL77466.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434992586|gb|ELL84025.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|434999637|gb|ELL90811.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435005394|gb|ELL96316.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435005532|gb|ELL96452.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435012824|gb|ELM03499.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435019627|gb|ELM10071.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435022796|gb|ELM13092.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435029251|gb|ELM19309.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435033397|gb|ELM23289.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435034204|gb|ELM24094.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435035330|gb|ELM25175.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435045598|gb|ELM35224.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435046366|gb|ELM35981.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435058969|gb|ELM48276.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435062787|gb|ELM51961.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435064710|gb|ELM53830.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435072029|gb|ELM60958.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435077250|gb|ELM66006.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435083848|gb|ELM72449.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435085349|gb|ELM73902.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435088589|gb|ELM77046.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435093579|gb|ELM81919.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435097827|gb|ELM86086.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435107553|gb|ELM95536.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435108008|gb|ELM95986.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435108409|gb|ELM96374.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435118612|gb|ELN06263.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435126541|gb|ELN13935.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435131501|gb|ELN18712.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435136193|gb|ELN23283.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435137459|gb|ELN24510.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435140885|gb|ELN27827.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435149294|gb|ELN35990.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435150416|gb|ELN37088.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435156718|gb|ELN43208.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435159534|gb|ELN45852.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435160890|gb|ELN47132.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435172560|gb|ELN58103.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435173221|gb|ELN58746.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435178130|gb|ELN63366.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435180133|gb|ELN65241.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435191669|gb|ELN76225.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435193223|gb|ELN77702.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435204946|gb|ELN88595.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435207343|gb|ELN90816.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435209948|gb|ELN93219.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435215110|gb|ELN97842.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|435217355|gb|ELN99789.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435218439|gb|ELO00840.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435226468|gb|ELO08033.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435227561|gb|ELO09052.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435242249|gb|ELO22560.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435246053|gb|ELO26074.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435247416|gb|ELO27367.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435251532|gb|ELO31143.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435257235|gb|ELO36529.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435257564|gb|ELO36846.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435265557|gb|ELO44385.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435273630|gb|ELO51895.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435277088|gb|ELO55046.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435277507|gb|ELO55448.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435288443|gb|ELO65462.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435290853|gb|ELO67746.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435294365|gb|ELO71001.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435296801|gb|ELO73152.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|435299928|gb|ELO76023.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435314443|gb|ELO87868.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435324182|gb|ELO96115.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435327614|gb|ELO99265.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|435334800|gb|ELP05234.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|435335951|gb|ELP06017.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|436412128|gb|ELP10072.1| recombinase A [Salmonella enterica subsp. enterica serovar Agona
str. SH08SF124]
gi|436416899|gb|ELP14800.1| recombinase A [Salmonella enterica subsp. enterica serovar Agona
str. SH11G1113]
gi|436417365|gb|ELP15260.1| recombinase A [Salmonella enterica subsp. enterica serovar Agona
str. SH10GFN094]
gi|444844414|gb|ELX69654.1| recombinase A [Salmonella enterica subsp. enterica serovar Dublin
str. HWS51]
gi|444846365|gb|ELX71546.1| recombinase A [Salmonella enterica subsp. enterica serovar Dublin
str. SL1438]
gi|444868887|gb|ELX93498.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444870038|gb|ELX94582.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444870486|gb|ELX94988.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444874140|gb|ELX98406.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444874272|gb|ELX98537.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444883110|gb|ELY07018.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|444890491|gb|ELY13820.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|451912351|gb|AGF84157.1| recombinase A [Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
Length = 353
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|90408944|ref|ZP_01217078.1| putative RecA protein [Psychromonas sp. CNPT3]
gi|90309945|gb|EAS38096.1| putative RecA protein [Psychromonas sp. CNPT3]
Length = 351
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 160/236 (67%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
KD AL AL Q+ FGK S++ L +STGSL LD+ALGIGGLP GR+VEI
Sbjct: 7 KDKALAAALGQIEKQFGKGSIMRLGDGNAMMDIEAVSTGSLGLDIALGIGGLPCGRVVEI 66
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI EAQK G CA++D E+ALDP A+ +G++ + LLI+QPD+ E
Sbjct: 67 YGPESSGKTTLTLQVIAEAQKKGKTCAFIDAEHALDPIYAKKLGVNIDELLISQPDTGEQ 126
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++ V+V+DSVAAL PK EI + + Q+R+M+QALRK+ S+ Q
Sbjct: 127 ALEICDMLIRSGAVGVVVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTGSIKQ 186
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 187 TNTMVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKNGDEI 239
>gi|915212|gb|AAA73517.1| RecA [Gluconobacter oxydans]
Length = 344
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 121/244 (49%), Positives = 167/244 (68%), Gaps = 16/244 (6%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL ALSQ+ FGK S++ + G R + VISTGSL LD+ALGIGG+P+G
Sbjct: 1 MDKTKALEGALSQIERAFGKGSIMRM----GQRPKEQADVISTGSLGLDIALGIGGMPRG 56
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALHV+ EAQK GG A +D E+ALDP A +G++ + LL++QP
Sbjct: 57 RIVEIYGPESSGKTTLALHVLAEAQKKGGTVAVIDAEHALDPGYARKLGVNIDELLLSQP 116
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 117 DAGEQALEICDTLVRSGAVDVLVVDSVAALVPRRELEGDMGDSHVGLHARLMSQALRKLT 176
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRM---DEVTSGGNALKFYAALRLRMMRTRLFKI 297
++ +S+TL+IFLNQ+ G +G M E T+GGNALKFY+++RL + K
Sbjct: 177 GTVSRSNTLVIFLNQM------GMKIGVMFGNPETTTGGNALKFYSSIRLDIRHIGSIKD 230
Query: 298 ADKV 301
D+V
Sbjct: 231 KDEV 234
>gi|418843372|ref|ZP_13398169.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19443]
gi|418856879|ref|ZP_13411515.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19470]
gi|418862497|ref|ZP_13417037.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19536]
gi|392816708|gb|EJA72630.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19443]
gi|392835764|gb|EJA91355.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19470]
gi|392835899|gb|EJA91488.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19536]
Length = 353
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|167550335|ref|ZP_02344092.1| protein RecA [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|168230885|ref|ZP_02655943.1| protein RecA [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|194469905|ref|ZP_03075889.1| protein RecA [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194456269|gb|EDX45108.1| protein RecA [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|205324866|gb|EDZ12705.1| protein RecA [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205334494|gb|EDZ21258.1| protein RecA [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
Length = 353
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|157804130|ref|YP_001492679.1| recombinase A [Rickettsia canadensis str. McKiel]
gi|166220673|sp|A8EZW1.1|RECA_RICCK RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|157785393|gb|ABV73894.1| recombinase A [Rickettsia canadensis str. McKiel]
Length = 343
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 169/242 (69%), Gaps = 12/242 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ A+ AL+Q+ +GK S++ L G R +STGSL LD+ALGIGG+PKGRI
Sbjct: 6 KERAIAAALAQIEKSYGKGSVMKL----GQRPNIDIEAVSTGSLGLDMALGIGGVPKGRI 61
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTL LH+I EAQK GG CA++D E+ALDP+ A+ +G++ + L+I+QPD+
Sbjct: 62 IEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDT 121
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +SG ID++++DSVAAL+PK EI + +Q+R+M+QALRK+ S
Sbjct: 122 GEQALEITDTLIRSGGIDMVIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 181
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+ +++ + +F+NQ+R K G G E T+GGNALKFYA++R+ + R+ I DK
Sbjct: 182 ISRTNCIAVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRIDI--RRIGSIKDKEE 236
Query: 303 IL 304
++
Sbjct: 237 VI 238
>gi|396585089|ref|ZP_10485520.1| RecA protein [Actinomyces sp. ICM47]
gi|395547179|gb|EJG14669.1| RecA protein [Actinomyces sp. ICM47]
Length = 365
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 160/235 (68%), Gaps = 8/235 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL +ALSQ+ FGK S++ R R PV I TGSL LD+ALGIGGLP+GR++
Sbjct: 16 RNKALEVALSQIDKQFGKGSVM---RLGDDNRPPVQVIPTGSLALDVALGIGGLPRGRVI 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTT+ALH + AQK GG A++D E+ALDP A A+G+D ++LL++QPD+
Sbjct: 73 EVYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 133 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 192
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ T IF+NQ+R K G G E T+GG ALKFYA++R+ + R K A
Sbjct: 193 SATGTTAIFINQLR--EKIGVFFGS-PETTTGGKALKFYASVRIDVRRIETLKEA 244
>gi|442608742|ref|ZP_21023489.1| RecA protein [Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441750138|emb|CCQ09551.1| RecA protein [Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 349
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/239 (50%), Positives = 162/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ L G + ISTGSL +D+ALGIGGLP GRI
Sbjct: 5 KQKALDAALSQIERQFGKGSIMKL----GDSQALDIESISTGSLGIDIALGIGGLPTGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI EAQK G CA++D E+ALDP A+ +G++ + LL++QPD+
Sbjct: 61 VEIYGPESSGKTTLTLQVIAEAQKQGKTCAFVDAEHALDPVYAQKLGVNVDELLVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DV++VDSVAAL PK EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEICDMLVRSGAVDVVIVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLTAN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S+TL IF+NQ+R K G G E T+GGNALKFYA++R+ + R K D+V
Sbjct: 181 IKRSNTLCIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRIDIRRIGSVKEGDEV 236
>gi|375256924|ref|YP_005016094.1| recombinase A [Klebsiella oxytoca KCTC 1686]
gi|365906402|gb|AEX01855.1| recombinase A [Klebsiella oxytoca KCTC 1686]
Length = 352
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|392308033|ref|ZP_10270567.1| recombinase A [Pseudoalteromonas citrea NCIMB 1889]
Length = 349
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/239 (50%), Positives = 163/239 (68%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ L G + ISTGSL +D+ALGIGGLP GRI
Sbjct: 5 KQKALDAALSQIERQFGKGSIMKL----GDSQALDIEAISTGSLGIDIALGIGGLPTGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI EAQK G CA++D E+ALDP AE +G++ ++LL++QPD+
Sbjct: 61 VEIYGPESSGKTTLTLQVIAEAQKKGKTCAFVDAEHALDPVYAEKLGVNVDDLLVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DV++VDSVAAL PK EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEICDMLVRSGAVDVVIVDSVAALTPKAEIEGDMGDHHVGLQARLMSQALRKLTGN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S+TL IF+NQ+R K G G E T+GGNALKFY+++R+ + R K D+V
Sbjct: 181 IKRSNTLCIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRIDIRRIGSVKDGDEV 236
>gi|297539361|ref|YP_003675130.1| recombination protein RecA [Methylotenera versatilis 301]
gi|297258708|gb|ADI30553.1| recA protein [Methylotenera versatilis 301]
Length = 342
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 118/250 (47%), Positives = 167/250 (66%), Gaps = 10/250 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL+Q+ FGK S++ + +STGSL LD+ALGIGGLP+GR++EI
Sbjct: 5 KSKALSAALAQIEKQFGKGSIMRMGDGNIGEDIQAVSTGSLGLDIALGIGGLPRGRVIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI + QK GG A++D E+ALDP A +G++ +LLI+QPD+ E
Sbjct: 65 YGPESSGKTTLTLSVIAQMQKSGGVAAFIDAEHALDPQYAAKLGVNVPDLLISQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L +VD L +SGS+D++V+DSVAAL P+ EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIVDMLVRSGSVDIVVIDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKLTGNIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNILE 305
++T++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 185 TNTMVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKKGDEV---- 237
Query: 306 VVNIGSMIRL 315
IGS R+
Sbjct: 238 ---IGSETRV 244
>gi|85712116|ref|ZP_01043169.1| RecA recombinase [Idiomarina baltica OS145]
gi|85694106|gb|EAQ32051.1| RecA recombinase [Idiomarina baltica OS145]
Length = 360
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/239 (50%), Positives = 164/239 (68%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
+ AL ALSQ+ FGK S++ L G + +STGSL LD+ALGIGGLP GR+
Sbjct: 5 RSKALDAALSQIERQFGKGSIMRL----GDNQTMDIASVSTGSLGLDVALGIGGLPFGRV 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI EAQK G CA++D E+ALDP AEA+G+ ++LL++QPD+
Sbjct: 61 VEIYGPESSGKTTLTLQVIAEAQKAGKTCAFVDAEHALDPIYAEALGVRVDDLLVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DV++VDSVAAL PK EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEICDMLVRSGAVDVVIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTSN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S++L IF+NQ+R K G G E T+GGNALKFY+++RL + RT K D+V
Sbjct: 181 IKKSNSLCIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRTGALKEGDEV 236
>gi|109453402|gb|ABG34181.1| RecA [Salmonella enterica subsp. salamae]
gi|109453404|gb|ABG34182.1| RecA [Salmonella enterica subsp. salamae]
gi|109453406|gb|ABG34183.1| RecA [Salmonella enterica subsp. salamae]
gi|109453408|gb|ABG34184.1| RecA [Salmonella enterica subsp. salamae]
gi|109453410|gb|ABG34185.1| RecA [Salmonella enterica subsp. salamae]
gi|109453412|gb|ABG34186.1| RecA [Salmonella enterica subsp. salamae]
gi|109453414|gb|ABG34187.1| RecA [Salmonella enterica subsp. salamae]
gi|109453416|gb|ABG34188.1| RecA [Salmonella enterica subsp. salamae]
gi|109453418|gb|ABG34189.1| RecA [Salmonella enterica subsp. salamae]
gi|109453420|gb|ABG34190.1| RecA [Salmonella enterica subsp. salamae]
gi|109453442|gb|ABG34201.1| RecA [Salmonella enterica subsp. diarizonae]
gi|109453444|gb|ABG34202.1| RecA [Salmonella enterica subsp. diarizonae]
gi|109453446|gb|ABG34203.1| RecA [Salmonella enterica subsp. diarizonae]
gi|109453448|gb|ABG34204.1| RecA [Salmonella enterica subsp. diarizonae]
gi|109453450|gb|ABG34205.1| RecA [Salmonella enterica subsp. diarizonae]
gi|109453456|gb|ABG34208.1| RecA [Salmonella enterica subsp. diarizonae]
gi|109453458|gb|ABG34209.1| RecA [Salmonella enterica subsp. diarizonae]
gi|109453460|gb|ABG34210.1| RecA [Salmonella enterica subsp. diarizonae]
gi|109453462|gb|ABG34211.1| RecA [Salmonella enterica subsp. diarizonae]
Length = 353
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|109453472|gb|ABG34216.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453474|gb|ABG34217.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453488|gb|ABG34224.1| RecA [Salmonella enterica subsp. houtenae]
Length = 353
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|397659531|ref|YP_006500233.1| recombinase A [Klebsiella oxytoca E718]
gi|423109875|ref|ZP_17097570.1| protein recA [Klebsiella oxytoca 10-5243]
gi|423115811|ref|ZP_17103502.1| protein recA [Klebsiella oxytoca 10-5245]
gi|376379756|gb|EHS92506.1| protein recA [Klebsiella oxytoca 10-5245]
gi|376380810|gb|EHS93552.1| protein recA [Klebsiella oxytoca 10-5243]
gi|394347690|gb|AFN33811.1| RecA protein [Klebsiella oxytoca E718]
Length = 352
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|375002549|ref|ZP_09726889.1| protein RecA [Salmonella enterica subsp. enterica serovar Infantis
str. SARB27]
gi|353077237|gb|EHB42997.1| protein RecA [Salmonella enterica subsp. enterica serovar Infantis
str. SARB27]
Length = 358
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 12 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 67
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 68 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 127
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 128 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 187
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 188 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 243
>gi|289806435|ref|ZP_06537064.1| recombinase A [Salmonella enterica subsp. enterica serovar Typhi
str. AG3]
Length = 256
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|109453454|gb|ABG34207.1| RecA [Salmonella enterica subsp. diarizonae]
Length = 353
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|427799961|ref|ZP_18967790.1| recombinase A, partial [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|414063863|gb|EKT44935.1| recombinase A, partial [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
Length = 351
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|442768430|gb|AGC70166.1| recombinase A, partial [Xenorhabdus sp. SF362]
Length = 295
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 160/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 4 KQKALAAALGQIEKQFGKGSIMRL----GENRSMDVETISTGSLSLDIALGAGGLPMGRI 59
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 60 VEIYGPESSGKTTLTLQVIAAAQREGRTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDT 119
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L++SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 120 GEQALEICDALSRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 179
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 180 LKNSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGSVKNGDEV 235
>gi|336246808|ref|YP_004590518.1| recombinase A [Enterobacter aerogenes KCTC 2190]
gi|444355086|ref|YP_007391230.1| RecA protein [Enterobacter aerogenes EA1509E]
gi|334732864|gb|AEG95239.1| recombinase A [Enterobacter aerogenes KCTC 2190]
gi|443905916|emb|CCG33690.1| RecA protein [Enterobacter aerogenes EA1509E]
Length = 352
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|109453422|gb|ABG34191.1| RecA [Salmonella enterica subsp. arizonae]
gi|109453424|gb|ABG34192.1| RecA [Salmonella enterica subsp. arizonae]
gi|109453426|gb|ABG34193.1| RecA [Salmonella enterica subsp. arizonae]
gi|109453428|gb|ABG34194.1| RecA [Salmonella enterica subsp. arizonae]
gi|109453430|gb|ABG34195.1| RecA [Salmonella enterica subsp. arizonae]
gi|109453432|gb|ABG34196.1| RecA [Salmonella enterica subsp. arizonae]
gi|109453434|gb|ABG34197.1| RecA [Salmonella enterica subsp. arizonae]
gi|109453436|gb|ABG34198.1| RecA [Salmonella enterica subsp. arizonae]
gi|109453438|gb|ABG34199.1| RecA [Salmonella enterica subsp. arizonae]
gi|109453440|gb|ABG34200.1| RecA [Salmonella enterica subsp. arizonae]
Length = 353
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|110679928|ref|YP_682935.1| recombinase A [Roseobacter denitrificans OCh 114]
gi|109456044|gb|ABG32249.1| RecA protein [Roseobacter denitrificans OCh 114]
Length = 359
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 116/240 (48%), Positives = 162/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGLP GR
Sbjct: 13 KSADKQKALDSALAQIERQFGKGSIMKLGAEGAVQDIQASSTGSLGLDIALGIGGLPMGR 72
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTL LH + E QK GG CA++D E+ALDP+ A+ +G+D + LLI+QPD
Sbjct: 73 IVEIYGPESSGKTTLTLHCVAEQQKAGGVCAFVDAEHALDPTYAKKLGVDLDELLISQPD 132
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++++++VDSVAAL PK E+ + Q+R+M+QA+RK+
Sbjct: 133 TGEQALEITDTLVRSGAVNMVIVDSVAALTPKSELEGDMGDSSVGVQARLMSQAMRKLTG 192
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+ ++IF+NQ+R K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 193 SISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGALKDRDEV 249
>gi|206577023|ref|YP_002236965.1| recombinase A [Klebsiella pneumoniae 342]
gi|288933922|ref|YP_003437981.1| recA protein [Klebsiella variicola At-22]
gi|290510999|ref|ZP_06550368.1| RecA protein [Klebsiella sp. 1_1_55]
gi|226723632|sp|B5XVB6.1|RECA_KLEP3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|206566081|gb|ACI07857.1| protein RecA [Klebsiella pneumoniae 342]
gi|288888651|gb|ADC56969.1| recA protein [Klebsiella variicola At-22]
gi|289775992|gb|EFD83991.1| RecA protein [Klebsiella sp. 1_1_55]
Length = 352
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|385682125|ref|ZP_10056053.1| recombination protein RecA [Amycolatopsis sp. ATCC 39116]
Length = 346
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 115/233 (49%), Positives = 160/233 (68%), Gaps = 8/233 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGP--VISTGSLKLDLALGIGGLPKGRIV 123
KD AL LAL+Q+ +GK S++ R R P VI TG++ LD+ALGIGGLP+GR++
Sbjct: 7 KDKALELALAQIDKQYGKGSVM---RLGEETRPPIGVIPTGAIALDIALGIGGLPRGRVI 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A+A+G+D + LL++QPD+
Sbjct: 64 EIYGPESSGKTTVALHAVANAQKAGGIAAFIDAEHALDPEYAKALGVDTDALLVSQPDTG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG++D++V+DSVAAL+P+ EI + + Q+R+M+QALRKI +L
Sbjct: 124 EQALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGAL 183
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
S T IF+NQ+R K G G E T+GG ALKFYA++RL + R K
Sbjct: 184 SNSGTTAIFINQLR--EKVGVMFGS-PETTTGGKALKFYASVRLDVRRIETLK 233
>gi|379023275|ref|YP_005299936.1| recombinase A [Rickettsia canadensis str. CA410]
gi|376324213|gb|AFB21454.1| recombinase A [Rickettsia canadensis str. CA410]
Length = 343
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 169/242 (69%), Gaps = 12/242 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ A+ AL+Q+ +GK S++ L G R +STGSL LD+ALGIGG+PKGRI
Sbjct: 6 KERAIAAALAQIEKSYGKGSVMKL----GQRPNIDIEAVSTGSLGLDMALGIGGVPKGRI 61
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTL LH+I EAQK GG CA++D E+ALDP+ A+ +G++ + L+I+QPD+
Sbjct: 62 IEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDT 121
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +SG ID++++DSVAAL+PK EI + +Q+R+M+QALRK+ S
Sbjct: 122 GEQALEITDTLIRSGGIDMVIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 181
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+ +++ + +F+NQ+R K G G E T+GGNALKFYA++R+ + R+ I DK
Sbjct: 182 ISRTNCIAVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRIDI--RRIGSIKDKEE 236
Query: 303 IL 304
++
Sbjct: 237 VI 238
>gi|423141319|ref|ZP_17128957.1| protein RecA [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
gi|109453464|gb|ABG34212.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453466|gb|ABG34213.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453468|gb|ABG34214.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453470|gb|ABG34215.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453476|gb|ABG34218.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453478|gb|ABG34219.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453480|gb|ABG34220.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453482|gb|ABG34221.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453484|gb|ABG34222.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453486|gb|ABG34223.1| RecA [Salmonella enterica subsp. houtenae]
gi|379050491|gb|EHY68383.1| protein RecA [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
Length = 353
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|423121788|ref|ZP_17109472.1| protein recA [Klebsiella oxytoca 10-5246]
gi|376393401|gb|EHT06058.1| protein recA [Klebsiella oxytoca 10-5246]
Length = 354
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 128/253 (50%), Positives = 162/253 (64%), Gaps = 17/253 (6%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKDGDNV- 238
Query: 303 ILEVVNIGSMIRL 315
IGS R+
Sbjct: 239 ------IGSETRV 245
>gi|381157590|ref|ZP_09866824.1| protein RecA [Thiorhodovibrio sp. 970]
gi|380881453|gb|EIC23543.1| protein RecA [Thiorhodovibrio sp. 970]
Length = 360
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 111/236 (47%), Positives = 161/236 (68%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL AL Q+ FGK S++ + R V+STGSL LD+ALGIGGLP+GR++EI
Sbjct: 5 RKKALAAALGQIEKQFGKGSVMRMGDAGAIRNIEVVSTGSLSLDVALGIGGLPRGRVIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LH + E QK GG A++D E+ALDP AE +G++ + LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLHAVAEMQKTGGTAAFVDAEHALDPQYAEKLGVNMDELLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSGAVDLVVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ ++IF+NQ+R K G G E T+GGNALKFY+++RL + R K ++V
Sbjct: 185 SNAIVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGSLKKGEEV 237
>gi|294787000|ref|ZP_06752254.1| protein RecA [Parascardovia denticolens F0305]
gi|315226642|ref|ZP_07868430.1| recombination protein A [Parascardovia denticolens DSM 10105 = JCM
12538]
gi|294485833|gb|EFG33467.1| protein RecA [Parascardovia denticolens F0305]
gi|315120774|gb|EFT83906.1| recombination protein A [Parascardovia denticolens DSM 10105 = JCM
12538]
Length = 373
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/243 (49%), Positives = 164/243 (67%), Gaps = 10/243 (4%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGL 117
A+ ++ AL AL+Q+ FGK S + L G + VI TGSL LDLALGIGGL
Sbjct: 10 AQDARRQAALDTALAQVEKTFGKGSAMRL----GDKPVQHVEVIPTGSLALDLALGIGGL 65
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
P+GRIVEIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A +G+D ++L+I
Sbjct: 66 PRGRIVEIYGPESSGKTTIALHAVANAQKAGGVAAFIDAEHALDPEYARKLGVDTDSLII 125
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + D L +SG++D+IV+DSVAAL+PK EI + + Q+R+M+QALR
Sbjct: 126 SQPDNGEQALEIADMLIRSGALDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALR 185
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKI 297
K+ +L QS+T IF+NQ+R K G G E T+GG ALKFYA++RL + R + K
Sbjct: 186 KMTGALSQSNTTAIFINQLR--EKIGVMFGN-PETTTGGKALKFYASVRLDIRRIQTLKN 242
Query: 298 ADK 300
D+
Sbjct: 243 GDE 245
>gi|67459613|ref|YP_247237.1| recombinase A [Rickettsia felis URRWXCal2]
gi|75535990|sp|Q4UK63.1|RECA_RICFE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|67005146|gb|AAY62072.1| RecA protein [Rickettsia felis URRWXCal2]
Length = 343
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 115/242 (47%), Positives = 169/242 (69%), Gaps = 12/242 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ A+ AL+Q+ +GK S++ L G R +STGSL LD+ALGIGG+PKGRI
Sbjct: 6 KERAIAAALAQIEKSYGKGSVMKL----GQRPNIDIEAVSTGSLGLDIALGIGGVPKGRI 61
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTL LH+I EAQK GG CA++D E+ALDP+ A+ +G++ + L+I+QPD+
Sbjct: 62 IEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDT 121
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +SG ID+I++DSVAAL+PK EI + +Q+R+M+QALRK+ S
Sbjct: 122 GEQALEIADTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 181
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+ +++ + +F+NQ+R K G G E T+GGNALKFYA++R+ + R+ I DK
Sbjct: 182 INRTNCITVFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRIDIR--RIGSIKDKEE 236
Query: 303 IL 304
++
Sbjct: 237 VI 238
>gi|109453490|gb|ABG34225.1| RecA [Salmonella enterica subsp. indica]
gi|109453492|gb|ABG34226.1| RecA [Salmonella enterica subsp. indica]
gi|109453494|gb|ABG34227.1| RecA [Salmonella enterica subsp. indica]
gi|109453496|gb|ABG34228.1| RecA [Salmonella enterica subsp. indica]
gi|109453498|gb|ABG34229.1| RecA [Salmonella enterica subsp. indica]
gi|109453500|gb|ABG34230.1| RecA [Salmonella enterica subsp. indica]
Length = 353
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|399524213|ref|ZP_10764781.1| RecA protein [Atopobium sp. ICM58]
gi|398374655|gb|EJN52233.1| RecA protein [Atopobium sp. ICM58]
Length = 363
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 160/235 (68%), Gaps = 8/235 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL +ALSQ+ FGK S++ R R PV I TGSL LD+ALGIGGLP+GR++
Sbjct: 16 RNKALEVALSQIDKQFGKGSVM---RLGDDNRPPVQVIPTGSLALDVALGIGGLPRGRVI 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTT+ALH + AQK GG A++D E+ALDP A A+G+D ++LL++QPD+
Sbjct: 73 EVYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 133 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 192
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ T IF+NQ+R K G G E T+GG ALKFYA++R+ + R K A
Sbjct: 193 SATGTTAIFINQLR--EKIGVFFGS-PETTTGGKALKFYASVRIDVRRIETLKEA 244
>gi|313112840|ref|ZP_07798487.1| protein RecA [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624910|gb|EFQ08218.1| protein RecA [Faecalibacterium cf. prausnitzii KLE1255]
Length = 393
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 165/231 (71%), Gaps = 4/231 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K +AL AL+Q+ FGK +++ L S + ISTGSL LDLALG+GG+P+GRI+E+
Sbjct: 22 KKDALATALAQIEKQFGKGAVMKLGDN-ASMQVDAISTGSLGLDLALGVGGVPRGRIIEV 80
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH++ EAQK GG A++DVE+ALDP+ AEA+G+D NLL++QPD+ E
Sbjct: 81 YGPESSGKTTLALHILAEAQKQGGEVAFIDVEHALDPTYAEALGVDINNLLVSQPDTGEQ 140
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
+ + + L +SG+ID IVVDSVAA++P+ EI + + Q+R+M+QA+RK+ + +
Sbjct: 141 AMEICEALVRSGAIDAIVVDSVAAMVPRAEIEGEMGDSHVGLQARLMSQAMRKLTSVIGK 200
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
++T+ +F+NQ+R K G G EVT+GG ALK+YA++R+ + R K
Sbjct: 201 TNTVCVFINQLR--EKVGVMYGN-PEVTTGGRALKYYASVRIDIRRVEGLK 248
>gi|295103957|emb|CBL01501.1| RecA protein [Faecalibacterium prausnitzii SL3/3]
Length = 391
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 165/231 (71%), Gaps = 4/231 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K +AL AL+Q+ FGK +++ L S + ISTGSL LDLALG+GG+P+GRI+E+
Sbjct: 21 KKDALATALAQIEKQFGKGAVMKLGDN-ASMQVDAISTGSLGLDLALGVGGVPRGRIIEV 79
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH++ EAQK GG A++DVE+ALDP+ AEA+G+D NLL++QPD+ E
Sbjct: 80 YGPESSGKTTLALHILAEAQKKGGEVAFIDVEHALDPTYAEALGVDINNLLVSQPDTGEQ 139
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
+ + + L +SG+ID IVVDSVAA++P+ EI + + Q+R+M+QA+RK+ + +
Sbjct: 140 AMEICEALVRSGAIDAIVVDSVAAMVPRAEIEGEMGDSHVGLQARLMSQAMRKLTSVIGK 199
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
++T+ +F+NQ+R K G G EVT+GG ALK+YA++R+ + R K
Sbjct: 200 TNTVCVFINQLR--EKVGVMYGN-PEVTTGGRALKYYASVRIDIRRVEGLK 247
>gi|113953696|ref|YP_729672.1| recombinase A [Synechococcus sp. CC9311]
gi|123327976|sp|Q0ID00.1|RECA_SYNS3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|113881047|gb|ABI46005.1| recA protein [Synechococcus sp. CC9311]
Length = 382
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 164/238 (68%), Gaps = 7/238 (2%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSR-RGPVISTGSLKLDLALGIGGLP 118
D++ ++D AL L L Q+ +FGK S++ L SR R ISTG+L LDLALG GG P
Sbjct: 14 DSRPGERDKALDLVLGQIERNFGKGSIMRLGD--ASRMRVETISTGALTLDLALG-GGYP 70
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGR+VE+YG E+SGKTTL LH I E QK GG A++D E+ALDP A ++G+D ENLL++
Sbjct: 71 KGRVVEVYGPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAASLGVDIENLLVS 130
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VD L +S ++D++VVDSVAAL P+ EI + + AQ+R+M+QA+RK
Sbjct: 131 QPDTGEMALEIVDQLVRSAAVDIVVVDSVAALTPRAEIEGEMGDLAVGAQARLMSQAMRK 190
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
I ++ +S +IFLNQ+R K G G E T+GGNALKFYA++RL + R + K
Sbjct: 191 ITGNIGKSGCTVIFLNQLRL--KIGVTYGN-PETTTGGNALKFYASVRLDIRRIQTLK 245
>gi|402839509|ref|ZP_10887996.1| RecA protein [Klebsiella sp. OBRC7]
gi|423104449|ref|ZP_17092151.1| protein recA [Klebsiella oxytoca 10-5242]
gi|423125362|ref|ZP_17113041.1| protein recA [Klebsiella oxytoca 10-5250]
gi|376382412|gb|EHS95145.1| protein recA [Klebsiella oxytoca 10-5242]
gi|376398968|gb|EHT11589.1| protein recA [Klebsiella oxytoca 10-5250]
gi|402287783|gb|EJU36213.1| RecA protein [Klebsiella sp. OBRC7]
Length = 352
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|313672067|ref|YP_004050178.1| reca protein [Calditerrivibrio nitroreducens DSM 19672]
gi|312938823|gb|ADR18015.1| RecA protein [Calditerrivibrio nitroreducens DSM 19672]
Length = 333
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 114/235 (48%), Positives = 163/235 (69%), Gaps = 10/235 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGR 121
+K AL ALS++ DFGK +++ L G + + PVI TG L LD ALG+GG+P+GR
Sbjct: 4 EKLKALDAALSKIEKDFGKGAVMKL----GDKAIEKPPVIPTGILTLDAALGVGGIPRGR 59
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EI+G E+SGKTT+A H+I EAQKLGG A++D E+A+DP A+A+G+D +NL ++QPD
Sbjct: 60 IIEIFGSESSGKTTVAFHMIAEAQKLGGIAAFIDAEHAMDPVYAKAIGVDVDNLFVSQPD 119
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + +TL +SG+ID+IV+DSVAAL PK EI + + Q+R+M+QALRK+
Sbjct: 120 NGEAALEIAETLVRSGAIDIIVIDSVAALTPKAEIEGDMGDSFMGLQARLMSQALRKLTA 179
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+ +S T ++F+NQ R K G G E T+GGNALKFYA +R+ + R+ K
Sbjct: 180 IVNKSKTALVFINQTR--QKIGISYGN-PETTTGGNALKFYATIRIEVKRSGHLK 231
>gi|377819893|ref|YP_004976264.1| recombinase A [Burkholderia sp. YI23]
gi|357934728|gb|AET88287.1| RecA protein [Burkholderia sp. YI23]
Length = 356
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 160/236 (67%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L V+STGSL LD+ALG+GGLP+GR+VEI
Sbjct: 15 KSKALAAALSQIEKQFGKGSIMRLGAGEAVEDIQVVSTGSLGLDIALGVGGLPRGRVVEI 74
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L V+ E QKLGG A++D E+ALD A +G++ LLI+QPD+ E
Sbjct: 75 YGPESSGKTTLTLQVVAEMQKLGGTAAFIDAEHALDVQYAGKLGVNVPELLISQPDTGEQ 134
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L +VD L +SGSID+IV+DSVAAL+PK EI + Q+R+M+QALRK+ S+ +
Sbjct: 135 ALEIVDALVRSGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGSIKR 194
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ L+IF+NQ+R K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 195 TNCLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRIGSIKKNDEV 247
>gi|381394663|ref|ZP_09920375.1| recombination protein RecA [Glaciecola punicea DSM 14233 = ACAM
611]
gi|379329630|dbj|GAB55508.1| recombination protein RecA [Glaciecola punicea DSM 14233 = ACAM
611]
Length = 396
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 125/272 (45%), Positives = 175/272 (64%), Gaps = 18/272 (6%)
Query: 41 IHSLSSAAEVPEFDDEPHD---DAKIM-----QKDNALRLALSQLANDFGKESMLSLKRF 92
+HSL AE P H D K + +K+ AL AL Q+ FGK +++ L
Sbjct: 12 LHSLFYIAESPYITQAEHKIKPDVKRISIVSDKKNQALTAALGQIEKQFGKGAIMRL--- 68
Query: 93 FGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGG 149
G + ISTGSL +D+ALGIGGLP GR+VEIYG E+SGKTTL L VI EAQK G
Sbjct: 69 -GDNQALDIESISTGSLTIDIALGIGGLPCGRVVEIYGPESSGKTTLTLQVIAEAQKKGK 127
Query: 150 YCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAA 209
CA++D E+ALDP A+ +G++ + LL++QPD+ E L +VD L +S ++DV+V+DSVAA
Sbjct: 128 TCAFVDAEHALDPIYAKKLGVNIDELLVSQPDTGEQALEIVDMLVRSAAVDVVVIDSVAA 187
Query: 210 LIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRM 269
L P+ EI + + Q+R+M+QALRK+ ++ +S+T++IF+NQ+R K G G
Sbjct: 188 LTPRAEIEGDMGASHVGLQARLMSQALRKLTANIKRSNTMVIFINQIRM--KIGVMFGN- 244
Query: 270 DEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
E T+GGNALKFYA++RL + R K D+V
Sbjct: 245 PETTTGGNALKFYASVRLDIRRIGAVKDGDEV 276
>gi|345871860|ref|ZP_08823802.1| Protein recA [Thiorhodococcus drewsii AZ1]
gi|343919916|gb|EGV30657.1| Protein recA [Thiorhodococcus drewsii AZ1]
Length = 346
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 160/236 (67%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL AL Q+ FGK S++ + R ISTGSL LDLALGIGG+PKGR++EI
Sbjct: 5 RKKALAAALGQIEKQFGKGSVMRMGDAGAVRNVEAISTGSLGLDLALGIGGVPKGRVIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LHV+ E Q+LGG A++D E+ALD AE +G++ +LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLHVVAECQRLGGTAAFVDAEHALDAVYAEKLGVNMNDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +S ++D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSNAVDIVVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 185 SNCCVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGSIKKGDEV 237
>gi|170781613|ref|YP_001709945.1| recombinase A [Clavibacter michiganensis subsp. sepedonicus]
gi|169156181|emb|CAQ01323.1| recombinase A [Clavibacter michiganensis subsp. sepedonicus]
Length = 405
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 161/243 (66%), Gaps = 8/243 (3%)
Query: 56 EPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALG 113
E H A ++ +L AL+Q+ FGK S++ R R PV I TGS+ LD+ALG
Sbjct: 40 EEHPMASSADREKSLETALAQIDRQFGKGSVM---RLGSDERAPVAVIPTGSVALDVALG 96
Query: 114 IGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAE 173
IGGLP+GRIVEIYG E+SGKTTL LH I AQ+ GG A++D E+ALDP A+ +G+D +
Sbjct: 97 IGGLPRGRIVEIYGPESSGKTTLTLHAIANAQRAGGIAAFIDAEHALDPEYAKKLGVDID 156
Query: 174 NLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMT 233
LL++QPD+ E L + D L +SGSID++V+DSVAAL+P+ EI + + Q+R+M+
Sbjct: 157 ALLVSQPDTGEQALEIADMLVRSGSIDLVVIDSVAALVPRAEIEGEMGDSHVGLQARLMS 216
Query: 234 QALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTR 293
QALRK+ L Q+ T +IF+NQ+R K G G E T+GG ALKFYA++RL + R
Sbjct: 217 QALRKLTGGLNQTQTTMIFINQLR--EKIGVFFGS-PETTAGGKALKFYASVRLDIRRIE 273
Query: 294 LFK 296
K
Sbjct: 274 TLK 276
>gi|146312815|ref|YP_001177889.1| recombinase A [Enterobacter sp. 638]
gi|166918711|sp|A4WDQ8.1|RECA_ENT38 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|145319691|gb|ABP61838.1| RecA protein [Enterobacter sp. 638]
Length = 352
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 127/253 (50%), Positives = 162/253 (64%), Gaps = 17/253 (6%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GR+
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRV 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIASAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKDGDNV- 238
Query: 303 ILEVVNIGSMIRL 315
IGS R+
Sbjct: 239 ------IGSETRV 245
>gi|402703063|ref|ZP_10851042.1| recombinase A [Rickettsia helvetica C9P9]
Length = 343
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 115/242 (47%), Positives = 169/242 (69%), Gaps = 12/242 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ A+ AL+Q+ +GK S++ L G R +STGSL LD+ALGIGG+PKGRI
Sbjct: 6 KERAIAAALAQIEKSYGKGSVMKL----GQRPNVDIEAVSTGSLGLDIALGIGGVPKGRI 61
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTL LH+I EAQK GG CA++D E+ALDP+ A+ +G++ + L+I+QPD+
Sbjct: 62 IEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDT 121
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +SG ID+I++DSVAAL+PK EI + +Q+R+M+QALRK+ S
Sbjct: 122 GEQALEIADTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 181
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+ +++ + +F+NQ+R K G G E T+GGNALKFYA++R+ + R+ I DK
Sbjct: 182 INRTNCITVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRIDIR--RIGSIKDKEE 236
Query: 303 IL 304
++
Sbjct: 237 VI 238
>gi|354557783|ref|ZP_08977041.1| Protein recA [Desulfitobacterium metallireducens DSM 15288]
gi|353550577|gb|EHC20014.1| Protein recA [Desulfitobacterium metallireducens DSM 15288]
Length = 348
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 161/231 (69%), Gaps = 3/231 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL +ALSQ+ FGK S++ L VI TG+L LD+ALG+GG+P+GR++EI
Sbjct: 6 KLKALDVALSQIEKQFGKGSIMRLGEASAKMVVDVIPTGALSLDIALGVGGIPRGRMIEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH++ E+QK+GG A++D E+ALDP A+++G+D +NLLI+QPD+ E
Sbjct: 66 YGPESSGKTTVALHIVAESQKMGGTAAFIDAEHALDPVYAKSIGVDIDNLLISQPDTGEQ 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG++DV+V+DSVAAL+P+ EI + + +R+M+QALRK+ + +
Sbjct: 126 GLEICEALVRSGAVDVVVIDSVAALVPRAEIEGEMGDSHVGLHARLMSQALRKLTGVISK 185
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
SH +IF+NQ+R K G G E T+GG ALKFYA +RL + RT K
Sbjct: 186 SHASVIFINQLR--EKVGIMFGN-PETTTGGRALKFYATIRLDVRRTETLK 233
>gi|32490984|ref|NP_871238.1| recombinase A [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
gi|30316210|sp|Q8D2W7.1|RECA_WIGBR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|25166190|dbj|BAC24381.1| recA [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 331
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 161/238 (67%), Gaps = 10/238 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
K AL AL ++ FGK S+++L G R ISTGSL LD+ALG GGLP GR
Sbjct: 6 NKKKALEKALDKIEKQFGKGSIMTL----GENRSMDIETISTGSLSLDIALGTGGLPMGR 61
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTL L VI EAQK G CA++D E+ALDP A+ +G+D NLL +QPD
Sbjct: 62 IVEIYGPESSGKTTLTLEVIYEAQKKGKICAFIDAEHALDPIYAKNLGVDINNLLCSQPD 121
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D+LT+SG++D+I+VDSVAAL PK EI I ++ +R+M+QA+RK+
Sbjct: 122 NGEQALEICDSLTRSGAVDLIIVDSVAALTPKAEIDGEIGDLHLGLAARMMSQAMRKLAG 181
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
+L ++TL+IF+NQ+R K G G EVT+GGNALKFYA++RL + + K D
Sbjct: 182 NLKNANTLLIFINQIR--VKIGTIFGS-PEVTTGGNALKFYASVRLDIRKIGTIKDGD 236
>gi|332185210|ref|ZP_08386959.1| protein RecA [Sphingomonas sp. S17]
gi|332014934|gb|EGI56990.1| protein RecA [Sphingomonas sp. S17]
Length = 346
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 116/238 (48%), Positives = 169/238 (71%), Gaps = 6/238 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL AL+Q+ FGK S + L + + + ISTGSL LD+ALG+GGLP+GR++E+
Sbjct: 8 RQKALDAALAQIDRAFGKGSAMKLGQKE-TMQVEAISTGSLGLDIALGVGGLPRGRVIEV 66
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALHVI EAQK+GG A++D E+ALDP A+ +G++ + L+++QPD+ E
Sbjct: 67 YGPESSGKTTLALHVIAEAQKMGGTAAFVDAEHALDPVYAKKLGVNIDELIVSQPDTGEQ 126
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+Q+LRK+ S+ +
Sbjct: 127 ALEITDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSISR 186
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNI 303
S ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT +I D+ +I
Sbjct: 187 SRCMVIFINQLRM--KIGVMYGN-PETTTGGNALKFYASVRLDIRRT--GQIKDREDI 239
>gi|284097292|ref|ZP_06385430.1| recombinase A [Candidatus Poribacteria sp. WGA-A3]
gi|283831198|gb|EFC35170.1| recombinase A [Candidatus Poribacteria sp. WGA-A3]
Length = 349
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 118/248 (47%), Positives = 167/248 (67%), Gaps = 10/248 (4%)
Query: 68 NALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYG 127
AL LA++Q+ FGK S++ L S STGSL LDLALG+GGLP+GR+VEI+G
Sbjct: 2 KALELAVTQIEKQFGKGSIMKLGTGDVSDDVQATSTGSLALDLALGVGGLPRGRVVEIFG 61
Query: 128 REASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLL 187
E+SGKTTL LH I EAQK GG A++D E+ALD S A+ +G+ ++LL+AQPD+ E L
Sbjct: 62 PESSGKTTLCLHAIAEAQKTGGSAAFIDAEHALDVSYAKKLGVKIDDLLVAQPDTGEQAL 121
Query: 188 SVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSH 247
+ +TL +SG+ID++VVDSVAAL+P+ EI + + Q+R+M+QALRK+ ++ +S
Sbjct: 122 EIAETLVRSGAIDLVVVDSVAALVPRAEIEGEMGDSHMGLQARLMSQALRKLTGAISKSL 181
Query: 248 TLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNILEVV 307
T ++F+NQ+R K G G E T+GGNALKFY+++RL + R K +V
Sbjct: 182 TTVVFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRIESIKDGQEV------ 232
Query: 308 NIGSMIRL 315
IGS +R+
Sbjct: 233 -IGSRVRV 239
>gi|352102488|ref|ZP_08959235.1| recombinase A [Halomonas sp. HAL1]
gi|350600039|gb|EHA16117.1| recombinase A [Halomonas sp. HAL1]
Length = 357
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 121/245 (49%), Positives = 167/245 (68%), Gaps = 11/245 (4%)
Query: 63 IMQKDN---ALRLALSQLANDFGKESMLSLKRFFGSRR--GPVISTGSLKLDLALGIGGL 117
+ Q DN AL AL+Q+ FGK +++ R + R P +STGSL LD+ALGIGGL
Sbjct: 1 MAQDDNRTKALNAALTQIDRQFGKGTVM---RLGDAPRVVMPSVSTGSLGLDIALGIGGL 57
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
P GR+ EI+G E+SGKTTL L VI +AQK G CA++D E+ALDPS AE +G++ ++LLI
Sbjct: 58 PFGRVAEIFGPESSGKTTLTLSVIAQAQKQGKVCAFVDAEHALDPSYAEKLGVNLDDLLI 117
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + D L +SG +DVIV+DSVAAL P+ EI + + Q+R+M+QALR
Sbjct: 118 SQPDTGEQALEITDMLVRSGGVDVIVIDSVAALTPRAEIEGEMGDTHVGLQARLMSQALR 177
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKI 297
KI ++ ++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K+
Sbjct: 178 KITGNIKNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGSVKV 234
Query: 298 ADKVN 302
D+V
Sbjct: 235 GDEVT 239
>gi|333919370|ref|YP_004492951.1| protein recA [Amycolicicoccus subflavus DQS3-9A1]
gi|333481591|gb|AEF40151.1| Protein recA [Amycolicicoccus subflavus DQS3-9A1]
Length = 361
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLP 118
A ++ AL LAL+Q+ +FGK S++ R R P+ I TGS+ LD+ALGIGGLP
Sbjct: 18 APAYDREKALELALAQIDKNFGKGSVM---RLGDEVRPPISTIPTGSVALDVALGIGGLP 74
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GR++EIYG E+SGKTT+ALH + AQ+ GG A++D E+ALDP A+A+G+D + LL++
Sbjct: 75 RGRVIEIYGPESSGKTTVALHAVANAQRAGGIAAFIDAEHALDPEYAKALGVDTDALLVS 134
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + D LT+SG++D+IV+DSVAAL+P+ EI + + Q+R+M+QALRK
Sbjct: 135 QPDTGEQALEIADMLTRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRK 194
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+ +L S T IF+NQ+R K G G E T+GG ALKFYA++RL + R K
Sbjct: 195 MTSALSSSGTTAIFINQLR--EKIGVMFGS-PETTTGGKALKFYASVRLDVRRIETLK 249
>gi|149915204|ref|ZP_01903732.1| recombinase A [Roseobacter sp. AzwK-3b]
gi|149810925|gb|EDM70764.1| recombinase A [Roseobacter sp. AzwK-3b]
Length = 364
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 120/243 (49%), Positives = 159/243 (65%), Gaps = 3/243 (1%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D K K AL AL+Q+ FGK S++ + STGSL LD+ALGIGGLP
Sbjct: 10 DSKKNADKQKALESALAQIERQFGKGSIMKMGSDNPVADIEATSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRIVEIYG E+SGKTTL LH + E QK GG CA++D E+ALDP A+ +G+D LLI+
Sbjct: 70 KGRIVEIYGPESSGKTTLTLHCVAEEQKKGGVCAFVDAEHALDPIYAQKLGVDINELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VDTL +SG++ +IVVDSVAAL PK E+ + Q+R+M+QA+RK
Sbjct: 130 QPDTGEQSLEIVDTLVRSGAVSMIVVDSVAALTPKSELEGDMGDSNVGVQARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S +IF+NQ+R K G G E T+GGNALKFY+++RL + R K
Sbjct: 190 LTGSISRSKCTVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGSIKDR 246
Query: 299 DKV 301
D+V
Sbjct: 247 DEV 249
>gi|91204932|ref|YP_537287.1| recombinase A [Rickettsia bellii RML369-C]
gi|122990947|sp|Q1RKB6.1|RECA_RICBR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|91068476|gb|ABE04198.1| RecA [Rickettsia bellii RML369-C]
Length = 343
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 115/244 (47%), Positives = 170/244 (69%), Gaps = 12/244 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
+ K+ A+ AL+Q+ +GK S++ L G R +STGSL LD+ALGIGG+PKG
Sbjct: 4 IDKEKAVAAALAQIEKSYGKGSVMKL----GQRPNVDIESVSTGSLGLDIALGIGGIPKG 59
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EI+G E+SGKTTL LH+I EAQK GG CA++D E+ALDP+ A+ +G++ + L+I+QP
Sbjct: 60 RIIEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQP 119
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG ID+I++DSVAAL+PK EI + +Q+R+M+QALRK+
Sbjct: 120 DTGEQALEIADTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLT 179
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +++ + +F+NQ+R K G G E T+GGNALKFYA++R+ + R+ I DK
Sbjct: 180 ASINRTNCITVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRIDIR--RIGSIKDK 234
Query: 301 VNIL 304
++
Sbjct: 235 EEVI 238
>gi|420374718|ref|ZP_14874666.1| protein RecA [Shigella flexneri 1235-66]
gi|391315939|gb|EIQ73439.1| protein RecA [Shigella flexneri 1235-66]
Length = 354
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|374619667|ref|ZP_09692201.1| protein RecA [gamma proteobacterium HIMB55]
gi|374302894|gb|EHQ57078.1| protein RecA [gamma proteobacterium HIMB55]
Length = 347
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 117/238 (49%), Positives = 164/238 (68%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL+Q+ FGK +++ R R P ISTGSL LD+ALGIGGLP+GRIV
Sbjct: 5 KQKALDAALAQIERQFGKGTVM---RMGDQERVAIPAISTGSLGLDIALGIGGLPRGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI EAQK+GG A++D E+ALDP AE +G+ ++L+++QPD+
Sbjct: 62 EIYGPESSGKTTLTLQVIAEAQKMGGTAAFVDAEHALDPQYAEKLGVQMDDLIVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L V + L +SG++DV+VVDSVAAL PK EI + + Q+R+++QA+RK+ ++
Sbjct: 122 EQALEVAEMLVRSGAVDVLVVDSVAALTPKAEIEGDMGDSHVGLQARLLSQAMRKLTGAI 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
Q++ L+IF+NQ+R K G G E T+GGNALKFY+++RL + R K D++
Sbjct: 182 KQTNCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGAIKEGDEI 236
>gi|283786754|ref|YP_003366619.1| RecA protein (recombinase A) [Citrobacter rodentium ICC168]
gi|282950208|emb|CBG89844.1| RecA protein (recombinase A) [Citrobacter rodentium ICC168]
Length = 353
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|293192297|ref|ZP_06609408.1| protein RecA [Actinomyces odontolyticus F0309]
gi|399526449|ref|ZP_10766228.1| RecA protein [Actinomyces sp. ICM39]
gi|292820212|gb|EFF79206.1| protein RecA [Actinomyces odontolyticus F0309]
gi|398363067|gb|EJN46717.1| RecA protein [Actinomyces sp. ICM39]
Length = 363
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 160/235 (68%), Gaps = 8/235 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL +ALSQ+ FGK S++ R R PV I TGSL LD+ALGIGGLP+GR++
Sbjct: 16 RNKALEVALSQIDKQFGKGSVM---RLGDDNRPPVQVIPTGSLALDVALGIGGLPRGRVI 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTT+ALH + AQK GG A++D E+ALDP A A+G+D ++LL++QPD+
Sbjct: 73 EVYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 133 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 192
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ T IF+NQ+R K G G E T+GG ALKFYA++R+ + R K A
Sbjct: 193 SATGTTAIFINQLR--EKIGVFFGS-PETTTGGKALKFYASVRIDVRRIETLKEA 244
>gi|420236829|ref|ZP_14741306.1| recombinase A [Parascardovia denticolens IPLA 20019]
gi|391879932|gb|EIT88432.1| recombinase A [Parascardovia denticolens IPLA 20019]
Length = 373
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 120/243 (49%), Positives = 164/243 (67%), Gaps = 10/243 (4%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGL 117
A+ ++ AL AL+Q+ FGK S + L G + VI TGSL LDLALGIGGL
Sbjct: 10 AQDARRQAALDTALAQVEKTFGKGSAMRL----GDKPVQHVEVIPTGSLALDLALGIGGL 65
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
P+GRIVEIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A +G+D ++L+I
Sbjct: 66 PRGRIVEIYGPESSGKTTIALHAVANAQKAGGVAAFIDAEHALDPEYARKLGVDTDSLII 125
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + D L +SG++D+IV+DSVAAL+PK EI + + Q+R+M+QALR
Sbjct: 126 SQPDNGEQALEIADMLIRSGALDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALR 185
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKI 297
K+ +L QS+T IF+NQ+R K G G E T+GG ALKFYA++RL + R + K
Sbjct: 186 KMTGALSQSNTTAIFINQLR--EKIGVMFGN-PETTTGGKALKFYASVRLDIRRIQTLKN 242
Query: 298 ADK 300
D+
Sbjct: 243 GDE 245
>gi|237729653|ref|ZP_04560134.1| RecA [Citrobacter sp. 30_2]
gi|365101549|ref|ZP_09332179.1| protein recA [Citrobacter freundii 4_7_47CFAA]
gi|395229811|ref|ZP_10408121.1| RecA [Citrobacter sp. A1]
gi|421846629|ref|ZP_16279775.1| recombinase A [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|424730026|ref|ZP_18158624.1| protein reca [Citrobacter sp. L17]
gi|226908259|gb|EEH94177.1| RecA [Citrobacter sp. 30_2]
gi|363647099|gb|EHL86328.1| protein recA [Citrobacter freundii 4_7_47CFAA]
gi|394716486|gb|EJF22224.1| RecA [Citrobacter sp. A1]
gi|411771959|gb|EKS55606.1| recombinase A [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|422895238|gb|EKU35027.1| protein reca [Citrobacter sp. L17]
gi|455643430|gb|EMF22558.1| recombinase A [Citrobacter freundii GTC 09479]
Length = 354
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|359300549|ref|ZP_09186388.1| recombinase A [Haemophilus [parainfluenzae] CCUG 13788]
gi|402304789|ref|ZP_10823853.1| RecA protein [Haemophilus sputorum HK 2154]
gi|400377196|gb|EJP30076.1| RecA protein [Haemophilus sputorum HK 2154]
Length = 374
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 121/251 (48%), Positives = 167/251 (66%), Gaps = 11/251 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
Q++ AL AL+Q+ FGK S++ L + S +STGS+ LD+ALGIGGLP GRIVE
Sbjct: 20 QREKALSAALAQIEKQFGKGSIMKLGQT-QSLDIEAVSTGSIGLDMALGIGGLPMGRIVE 78
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
I+G E+SGKTTL L I +AQK G CA++D E+ALDP A +G+D + LLI+QPD+ E
Sbjct: 79 IFGPESSGKTTLTLSAIAQAQKAGKTCAFIDAEHALDPIYARKLGVDTDELLISQPDNGE 138
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++DVIVVDSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 139 QALEICDALVRSGAVDVIVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIK 198
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNIL 304
++ L+IF+NQ+R K G G E T+GGNALKFY+++RL + RT + K D +
Sbjct: 199 ATNCLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRTGVVKDGDNI--- 252
Query: 305 EVVNIGSMIRL 315
IGS R+
Sbjct: 253 ----IGSETRV 259
>gi|329890680|ref|ZP_08269023.1| protein RecA [Brevundimonas diminuta ATCC 11568]
gi|328845981|gb|EGF95545.1| protein RecA [Brevundimonas diminuta ATCC 11568]
Length = 351
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 163/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL A++Q+ FGK S++ L + +STGSL LD+ALGIGGLP GR++E+
Sbjct: 8 KQRALEAAIAQIDRAFGKGSVMKLGKAGQVAEIESVSTGSLGLDMALGIGGLPVGRVIEV 67
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTLALH + E QK GG A++D E+ALDP A+ +G++ ++LL++QPD+ E
Sbjct: 68 FGPESSGKTTLALHTVAEVQKKGGVAAFVDAEHALDPVYAQKLGVNLDDLLVSQPDAGEQ 127
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L +VDTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 128 ALEIVDTLVRSGAVDIVVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 187
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S +++F+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 188 SKCIVLFINQIRH--KIGVMYGS-PETTTGGNALKFYASVRLDIRRTGAIKNRDEV 240
>gi|283835572|ref|ZP_06355313.1| protein RecA [Citrobacter youngae ATCC 29220]
gi|291068782|gb|EFE06891.1| protein RecA [Citrobacter youngae ATCC 29220]
Length = 354
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|406906278|gb|EKD47483.1| hypothetical protein ACD_66C00041G0004 [uncultured bacterium]
Length = 335
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 157/227 (69%), Gaps = 4/227 (1%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
A+SQ+ FG+ S++ L + + ISTG L LDLALG+GG+P+GRI+EIYG E+SG
Sbjct: 17 AISQIKQRFGEGSIMRLGEA-KAMQIESISTGCLSLDLALGVGGVPRGRIIEIYGPESSG 75
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLA H++ E QK+GG A++D E+ALDP AE +G++ E L I+QPD+ E L +VDT
Sbjct: 76 KTTLAQHIVAEVQKIGGVAAFVDAEHALDPEYAEKIGVNIEELFISQPDNGEQALEIVDT 135
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +S ++DVIV+DSVAAL PK EI + + AQ+R+M+QALRK+ + +SHT +IF
Sbjct: 136 LVRSSAVDVIVIDSVAALTPKAEIEGDMGDHHMGAQARLMSQALRKLAGIISKSHTTVIF 195
Query: 253 LNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
+NQ+R K G G E TSGGNALKFY ++R+ + R K D
Sbjct: 196 INQIRH--KIGVMFGN-PETTSGGNALKFYCSVRIEVRRAAQIKQGD 239
>gi|350551783|ref|ZP_08920995.1| Protein recA [Thiorhodospira sibirica ATCC 700588]
gi|349796474|gb|EGZ50261.1| Protein recA [Thiorhodospira sibirica ATCC 700588]
Length = 352
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 160/236 (67%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ L AL+Q+ FGK +++ + R ISTGSL LD+ALGIGGLPKGR+VEI
Sbjct: 5 RKKQLSAALTQIERQFGKGAVIRMGGGAAVRDIEAISTGSLALDIALGIGGLPKGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTL L VI +AQ+ GG A++D E+ALDP A +G+D + LL++QPD+ E
Sbjct: 65 FGPESSGKTTLTLQVIAQAQRAGGTAAFIDAEHALDPGYARRIGVDIDELLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG +D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIADMLVRSGGVDIVVIDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLTANIQR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 185 SNTLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKKGDEV 237
>gi|376261050|ref|YP_005147770.1| protein RecA [Clostridium sp. BNL1100]
gi|373945044|gb|AEY65965.1| protein RecA [Clostridium sp. BNL1100]
Length = 348
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 116/239 (48%), Positives = 163/239 (68%), Gaps = 4/239 (1%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+++K AL +AL Q+ FGK +++ L I TGS+ LDLALG+GG+P+GRI
Sbjct: 1 MLEKKKALEMALGQIEKQFGKGAVMKLGEN-SHMNIESIPTGSMSLDLALGVGGVPRGRI 59
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEI+G E+SGKTT+ALH+I EAQK GG A++D E+ALDP A+ +G+D ENL+++QPD+
Sbjct: 60 VEIFGPESSGKTTVALHIIAEAQKAGGEAAFIDAEHALDPVYAKKLGVDIENLIVSQPDT 119
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG+IDVIVVDSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 120 GEQALEITEALVRSGAIDVIVVDSVAALVPKAEIDGEMGDSHIGLQARLMSQALRKLAGV 179
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S T IF+NQ+R K G G E T GG ALKFY+++RL + R K A++V
Sbjct: 180 ISKSKTTAIFINQLR--EKVGIMFGN-PETTPGGRALKFYSSVRLDVRRIEAIKQANEV 235
>gi|262273677|ref|ZP_06051490.1| RecA protein [Grimontia hollisae CIP 101886]
gi|262222092|gb|EEY73404.1| RecA protein [Grimontia hollisae CIP 101886]
Length = 347
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 120/239 (50%), Positives = 160/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R +STGSL LD+ALG GGLP GRI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRL----GDDRTMDIETVSTGSLSLDIALGAGGLPYGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI EAQK G CA++D E+ALDP A + +D +NLL++QPD+
Sbjct: 61 VEIYGPESSGKTTLTLQVIAEAQKQGKTCAFIDAEHALDPIYARKLNVDIDNLLVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI++DSVAAL PK EI + + Q+R+++QA+RK+ +
Sbjct: 121 GEQALEIADALTRSGAVDVIIIDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTAN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 181 IKNSNTLMIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGSIKEGDEV 236
>gi|160942862|ref|ZP_02090101.1| hypothetical protein FAEPRAM212_00338 [Faecalibacterium prausnitzii
M21/2]
gi|158445763|gb|EDP22766.1| RecA protein [Faecalibacterium prausnitzii M21/2]
Length = 391
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 165/231 (71%), Gaps = 4/231 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K +AL AL+Q+ FGK +++ L S + ISTGSL LDLALG+GG+P+GRI+E+
Sbjct: 21 KKDALATALAQIEKQFGKGAVMKLGDN-ASMQVDAISTGSLGLDLALGVGGVPRGRIIEV 79
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH++ EAQK GG A++DVE+ALDP+ AEA+G+D NLL++QPD+ E
Sbjct: 80 YGPESSGKTTLALHILAEAQKKGGEVAFIDVEHALDPTYAEALGVDINNLLVSQPDTGEQ 139
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
+ + + L +SG+ID IVVDSVAA++P+ EI + + Q+R+M+QA+RK+ + +
Sbjct: 140 AMEICEALVRSGAIDAIVVDSVAAMVPRAEIEGEMGDSHVGLQARLMSQAMRKLTSVIGK 199
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
++T+ +F+NQ+R K G G EVT+GG ALK+YA++R+ + R K
Sbjct: 200 TNTVCVFINQLR--EKVGVMYGN-PEVTTGGRALKYYASVRIDIRRVEGLK 247
>gi|56414781|ref|YP_151856.1| recombinase A [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197363709|ref|YP_002143346.1| recombinase A [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|76363340|sp|Q5PF15.3|RECA_SALPA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238689955|sp|B5BEN7.1|RECA_SALPK RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|56129038|gb|AAV78544.1| RecA protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. ATCC 9150]
gi|197095186|emb|CAR60737.1| RecA protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. AKU_12601]
Length = 353
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL A+ Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAAMGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|429462914|ref|YP_007184377.1| recombination protein RecA [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
gi|451811340|ref|YP_007447795.1| recombination protein RecA [Candidatus Kinetoplastibacterium
crithidii TCC036E]
gi|429338428|gb|AFZ82851.1| recombination protein RecA [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
gi|451776498|gb|AGF47497.1| recombination protein RecA [Candidatus Kinetoplastibacterium
crithidii TCC036E]
Length = 352
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 116/236 (49%), Positives = 160/236 (67%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
KD AL A+SQ+ FGK S++ VISTGSL LD+ALG+GGLP+GR++EI
Sbjct: 13 KDKALSAAISQIEKQFGKGSVMRYGDNDVQNDIQVISTGSLGLDIALGVGGLPRGRVIEI 72
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QK+GG CA++D E+ALD A +GI +LL++QPD+ E
Sbjct: 73 YGPESSGKTTLTLQVIAEMQKIGGTCAFIDAEHALDVQYASKLGIVLSDLLVSQPDTGEQ 132
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SGS+D+IV+DSVAAL+PK EI + Q+R+M+QALRK+ ++ +
Sbjct: 133 ALEIADALVRSGSVDLIVIDSVAALVPKAEIEGDMGDSLPGLQARLMSQALRKLTATIKR 192
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 193 TNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRVGSIKKGDEV 245
>gi|398347369|ref|ZP_10532072.1| recombinase A [Leptospira broomii str. 5399]
Length = 372
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 163/238 (68%), Gaps = 7/238 (2%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
DD+K M A+ A++Q+ FGK S++ L + PVI TGSL LD+ALGIGG P
Sbjct: 21 DDSKKM----AIDQAMTQIEKQFGKGSIMRLGAASATNVMPVIPTGSLDLDIALGIGGYP 76
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
GRI+EIYG E+SGKTTL L I EAQK GG A++D E+ALDPS A+ +G++ E LL++
Sbjct: 77 LGRIIEIYGPESSGKTTLTLAAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNLEELLVS 136
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + ++L +S +ID+IVVDSVAAL+PK EI + + Q+R+M+QALRK
Sbjct: 137 QPDNGEEALEICESLVRSNAIDIIVVDSVAALVPKAEIEGDMGDAHMGLQARLMSQALRK 196
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+ ++ +S T+++F+NQ+R K G G E T+GGNALKFY+++RL + + K
Sbjct: 197 LTGTISKSRTVVVFINQIRM--KIGVMFGS-PETTTGGNALKFYSSIRLDIRKIETLK 251
>gi|154509073|ref|ZP_02044715.1| hypothetical protein ACTODO_01590 [Actinomyces odontolyticus ATCC
17982]
gi|153798707|gb|EDN81127.1| RecA protein [Actinomyces odontolyticus ATCC 17982]
Length = 363
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 160/235 (68%), Gaps = 8/235 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL +ALSQ+ FGK S++ R R PV I TGSL LD+ALGIGGLP+GR++
Sbjct: 16 RNKALEVALSQIDKQFGKGSVM---RLGDDNRPPVQVIPTGSLALDVALGIGGLPRGRVI 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTT+ALH + AQK GG A++D E+ALDP A A+G+D ++LL++QPD+
Sbjct: 73 EVYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 133 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 192
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ T IF+NQ+R K G G E T+GG ALKFYA++R+ + R K A
Sbjct: 193 SATGTTAIFINQLR--EKIGVFFGS-PETTTGGKALKFYASVRIDVRRIETLKEA 244
>gi|335040835|ref|ZP_08533956.1| Protein recA [Caldalkalibacillus thermarum TA2.A1]
gi|334179270|gb|EGL81914.1| Protein recA [Caldalkalibacillus thermarum TA2.A1]
Length = 352
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 117/245 (47%), Positives = 164/245 (66%), Gaps = 8/245 (3%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL +AL Q+ FGK S++ L + + IS+GSL LD+ALG+GG P+GRIVEIYG
Sbjct: 8 ALDMALRQIEKQFGKGSIMKLGEAAVNNQVSTISSGSLALDIALGVGGYPRGRIVEIYGP 67
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTT+ALH I EAQK+GG A++D E+ALDP A+ +G++ + LL++QPD+ E L
Sbjct: 68 ESSGKTTVALHAIAEAQKMGGQAAFIDAEHALDPQYAKNLGVNIDELLLSQPDTGEQALE 127
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ + L +SG+ID+IV+DSVAAL+PK EI + + Q+R+M+QALRK+ ++ +S T
Sbjct: 128 IAEALVRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAISKSKT 187
Query: 249 LIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK-----IADKVNI 303
+ IF+NQ+R K G G E T GG ALKFYA++RL + R K I +K I
Sbjct: 188 IAIFINQIR--EKVGVMFGN-PETTPGGRALKFYASIRLDVRRAETIKQGNDLIGNKTKI 244
Query: 304 LEVVN 308
V N
Sbjct: 245 KVVKN 249
>gi|352096526|ref|ZP_08957353.1| Protein recA [Synechococcus sp. WH 8016]
gi|351676176|gb|EHA59330.1| Protein recA [Synechococcus sp. WH 8016]
Length = 382
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/233 (51%), Positives = 161/233 (69%), Gaps = 7/233 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSR-RGPVISTGSLKLDLALGIGGLPKGRIV 123
+KD AL L L Q+ +FGK S++ L SR R ISTG+L LDLALG GG PKGR+V
Sbjct: 19 EKDKALDLVLGQIERNFGKGSIMRLGD--ASRMRVETISTGALTLDLALG-GGYPKGRVV 75
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTTL LH I E QK GG A++D E+ALDP A ++G+D ENLL++QPD+
Sbjct: 76 EVYGPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAASLGVDIENLLVSQPDTG 135
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L +VD L +S ++D++VVDSVAAL P+ EI + + AQ+R+M+QA+RKI ++
Sbjct: 136 EMALEIVDQLVRSAAVDIVVVDSVAALTPRAEIEGEMGDLAVGAQARLMSQAMRKITGNI 195
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+S +IFLNQ+R K G G E T+GGNALKFYA++RL + R + K
Sbjct: 196 GKSGCTVIFLNQLRL--KIGVTYGN-PETTTGGNALKFYASVRLDIRRIQTLK 245
>gi|405980451|ref|ZP_11038790.1| protein recA [Actinomyces turicensis ACS-279-V-Col4]
gi|404390444|gb|EJZ85513.1| protein recA [Actinomyces turicensis ACS-279-V-Col4]
Length = 364
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 160/235 (68%), Gaps = 8/235 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL +ALSQ+ FGK S++ R R PV I TGSL LD+ALGIGGLP+GR++
Sbjct: 17 RNKALEVALSQIDKQFGKGSVM---RLGDDSRPPVQVIPTGSLALDVALGIGGLPRGRVI 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A+A+G+D + LL++QPD+
Sbjct: 74 EIYGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPVYAKALGVDTDALLVSQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 134 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ T IF+NQ+R K G G E T+GG ALKFYA++R+ + R K A
Sbjct: 194 SATGTTAIFINQLR--EKIGVFFGS-PETTTGGKALKFYASVRIDVRRIETLKEA 245
>gi|383501258|ref|YP_005414617.1| recombinase A [Rickettsia australis str. Cutlack]
gi|378932269|gb|AFC70774.1| recombinase A [Rickettsia australis str. Cutlack]
Length = 343
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/253 (47%), Positives = 172/253 (67%), Gaps = 17/253 (6%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ A+ AL Q+ +GK S++ L G R +STGSL LD+ALGIGG+PKGRI
Sbjct: 6 KERAIAAALVQIEKSYGKGSVMKL----GQRPNVDIEAVSTGSLGLDIALGIGGVPKGRI 61
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTL LH+I EAQK GG CA++D E+ALDP+ A+ +G++ + L+I+QPD+
Sbjct: 62 IEIFGPESSGKTTLTLHLIAEAQKKGGICAFIDAEHALDPAYAKKLGVNIDELIISQPDT 121
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +SG ID+I++DSVAAL+PK EI + +Q+R+M+QALRK+ S
Sbjct: 122 GEQALEITDTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 181
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+ +++ + +F+NQ+R K G G E T+GGNALKFYA++R+ + R+ I DK
Sbjct: 182 INRTNCITVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRIDI--RRIGSIKDKEE 236
Query: 303 ILEVVNIGSMIRL 315
+ IGS R+
Sbjct: 237 V-----IGSQTRV 244
>gi|221133348|ref|ZP_03559653.1| recA protein [Glaciecola sp. HTCC2999]
Length = 344
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/244 (48%), Positives = 167/244 (68%), Gaps = 13/244 (5%)
Query: 64 MQKDN---ALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGL 117
M +DN AL AL Q+ FGK +++ L G + +STGSL +D+ALGIGGL
Sbjct: 1 MAEDNKTRALSAALGQIEKQFGKGAIMRL----GDNQAMDIESVSTGSLSIDIALGIGGL 56
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
P GR+VEIYG E+SGKTTL L VI EAQK+G CA++D E+ALDP AEA+G++ + LL+
Sbjct: 57 PCGRVVEIYGPESSGKTTLTLQVIAEAQKVGKTCAFVDAEHALDPVYAEALGVNIDELLV 116
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + D L +SG++DV++VDSVAAL PK EI + + Q+R+M+QALR
Sbjct: 117 SQPDTGEQALEICDMLVRSGAVDVVIVDSVAALTPKAEIEGDMGDSHVGLQARLMSQALR 176
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKI 297
K+ ++ +S+TL+IF+NQ+R K G G E T+GGNALKFY+++RL + R K
Sbjct: 177 KLTGNIKRSNTLVIFINQIRL--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRIGAIKD 233
Query: 298 ADKV 301
D++
Sbjct: 234 GDEI 237
>gi|336450646|ref|ZP_08621093.1| protein RecA [Idiomarina sp. A28L]
gi|336282469|gb|EGN75701.1| protein RecA [Idiomarina sp. A28L]
Length = 350
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/239 (49%), Positives = 161/239 (67%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK +++ L G R ISTGSL LD+ALGIGGLP GR+
Sbjct: 7 KQKALTAALGQIERQFGKGAIMRL----GDNRAMDVEAISTGSLSLDIALGIGGLPCGRV 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEI+G E+SGKTTL L VI EAQK G CA++D E+ALDP AE +G++ LL++QPD+
Sbjct: 63 VEIFGPESSGKTTLTLQVIAEAQKQGKTCAFVDAEHALDPIYAENLGVNINELLVSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +S ++DV++VDSVAAL PK EI + + Q+R+M+QALRK+ +
Sbjct: 123 GEQALEICDMLVRSAAVDVVIVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTAN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D++
Sbjct: 183 IKKSNTMVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGALKEGDEI 238
>gi|425075302|ref|ZP_18478405.1| protein recA [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|425085938|ref|ZP_18489031.1| protein recA [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|405595505|gb|EKB68895.1| protein recA [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|405606447|gb|EKB79439.1| protein recA [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
Length = 352
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALTAALGQIEKQFGKGSIMRL----GEDRTMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|291276423|ref|YP_003516195.1| recombination protein RecA [Helicobacter mustelae 12198]
gi|290963617|emb|CBG39449.1| recA protein [Helicobacter mustelae 12198]
Length = 346
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/239 (48%), Positives = 165/239 (69%), Gaps = 9/239 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGR 121
QK A+ LAL Q+ FGK +++ L G + + ISTGSL LDLALGI G+PKGR
Sbjct: 5 QKKKAIELALKQIDKTFGKGALVRL----GDKQVEKIEAISTGSLGLDLALGINGIPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTL+L ++ E Q+ GG CA++D E+ALD A+ +G+D ENLL++QPD
Sbjct: 61 IIEIYGPESSGKTTLSLQIVAECQRNGGICAFIDAEHALDVYYAKRLGVDTENLLVSQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L +++TLT+SG++D++V+DSVAAL PK EI + + Q+R+M+ ALRKI
Sbjct: 121 NGEQALEILETLTRSGAVDLVVIDSVAALTPKAEIDGDMGDQHVGLQARLMSHALRKITG 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
L + +T +IF+NQ+R + G G E T+GGNALKFYA++R+ + R K AD+
Sbjct: 181 VLHKMNTTLIFINQIRMKIGT-MGYGS-PETTTGGNALKFYASVRIDIRRIATLKQADQ 237
>gi|15604595|ref|NP_221113.1| recombinase A [Rickettsia prowazekii str. Madrid E]
gi|383486743|ref|YP_005404423.1| recombinase A [Rickettsia prowazekii str. GvV257]
gi|383488157|ref|YP_005405836.1| recombinase A [Rickettsia prowazekii str. Chernikova]
gi|383489002|ref|YP_005406680.1| recombinase A [Rickettsia prowazekii str. Katsinyian]
gi|383489842|ref|YP_005407519.1| recombinase A [Rickettsia prowazekii str. Dachau]
gi|383499980|ref|YP_005413341.1| recombinase A [Rickettsia prowazekii str. BuV67-CWPP]
gi|383500815|ref|YP_005414175.1| recombinase A [Rickettsia prowazekii str. RpGvF24]
gi|386082643|ref|YP_005999222.1| recombinase A [Rickettsia prowazekii str. Rp22]
gi|730486|sp|P41079.1|RECA_RICPR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|402679|gb|AAA17883.1| Rec A Protein [Rickettsia prowazekii str. Madrid E]
gi|3861290|emb|CAA15189.1| RECA PROTEIN (recA) [Rickettsia prowazekii str. Madrid E]
gi|292572409|gb|ADE30324.1| RecA [Rickettsia prowazekii str. Rp22]
gi|380757108|gb|AFE52345.1| recombinase A [Rickettsia prowazekii str. GvV257]
gi|380758512|gb|AFE53748.1| recombinase A [Rickettsia prowazekii str. RpGvF24]
gi|380761036|gb|AFE49558.1| recombinase A [Rickettsia prowazekii str. Chernikova]
gi|380761881|gb|AFE50402.1| recombinase A [Rickettsia prowazekii str. Katsinyian]
gi|380762726|gb|AFE51246.1| recombinase A [Rickettsia prowazekii str. BuV67-CWPP]
gi|380763565|gb|AFE52084.1| recombinase A [Rickettsia prowazekii str. Dachau]
Length = 340
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/244 (47%), Positives = 170/244 (69%), Gaps = 12/244 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
+ K+ A+ AL+Q+ +GK S++ L G R ISTGSL LD+ALGIGG+PKG
Sbjct: 4 IDKERAIAAALAQIEKSYGKGSVMKL----GQRPNVDIEAISTGSLGLDIALGIGGVPKG 59
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EI+G E+SGKTTL LH+I E+QK GG CA++D E+ALDP+ A+ +G++ + L+I+QP
Sbjct: 60 RIIEIFGPESSGKTTLTLHLIAESQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQP 119
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG ID+I++DSVAAL+PK EI + +Q+R+M+QALRK+
Sbjct: 120 DTGEQALEIADTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLT 179
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +++ + +F+NQ+R K G G E T+GGNALKFYA++R+ + R+ I DK
Sbjct: 180 ASINRTNCITVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRIDI--RRIGSIKDK 234
Query: 301 VNIL 304
++
Sbjct: 235 EEVI 238
>gi|359784995|ref|ZP_09288156.1| recombinase A [Halomonas sp. GFAJ-1]
gi|359297690|gb|EHK61917.1| recombinase A [Halomonas sp. GFAJ-1]
Length = 354
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/243 (49%), Positives = 166/243 (68%), Gaps = 11/243 (4%)
Query: 65 QKDN---ALRLALSQLANDFGKESMLSLKRFFGSRR--GPVISTGSLKLDLALGIGGLPK 119
Q DN AL ALSQ+ FGK +++ R + R P +STGSL LD+ALGIGGLP
Sbjct: 3 QDDNRTKALNAALSQIDRQFGKGTVM---RLGDAPRVVMPSVSTGSLGLDIALGIGGLPF 59
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GR+ EI+G E+SGKTTL L VI +AQK G CA++D E+ALDPS AE +G++ ++LL++Q
Sbjct: 60 GRVCEIFGPESSGKTTLTLSVIAQAQKQGKVCAFVDAEHALDPSYAEKLGVNLDDLLVSQ 119
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + D L +SG +DVIV+DSVAAL P+ EI + + Q+R+M+QALRKI
Sbjct: 120 PDTGEQALEITDMLVRSGGVDVIVIDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKI 179
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
++ ++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K+ D
Sbjct: 180 TGNIKNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGSVKVGD 236
Query: 300 KVN 302
+V
Sbjct: 237 EVT 239
>gi|157826209|ref|YP_001493929.1| recombinase A [Rickettsia akari str. Hartford]
gi|157800167|gb|ABV75421.1| recombinase A [Rickettsia akari str. Hartford]
Length = 362
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/253 (47%), Positives = 172/253 (67%), Gaps = 17/253 (6%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ A+ AL Q+ +GK S++ L G R +STGSL LD+ALGIGG+PKGRI
Sbjct: 25 KERAIAAALVQIEKSYGKGSVMKL----GQRPNVDIEAVSTGSLGLDIALGIGGVPKGRI 80
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTL LH+I EAQK GG CA++D E+ALDP+ A+ +G++ + L+I+QPD+
Sbjct: 81 IEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDT 140
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +SG ID+I++DSVAAL+PK EI + +Q+R+M+QALRK+ S
Sbjct: 141 GEQALEITDTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 200
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+ +++ + +F+NQ+R K G G E T+GGNALKFYA++R+ + R+ I DK
Sbjct: 201 INRTNCITVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRIDI--RRIGSIKDKEE 255
Query: 303 ILEVVNIGSMIRL 315
+ IGS R+
Sbjct: 256 V-----IGSQTRV 263
>gi|157964909|ref|YP_001499733.1| recombinase A [Rickettsia massiliae MTU5]
gi|379713420|ref|YP_005301758.1| recombinase A [Rickettsia massiliae str. AZT80]
gi|166918715|sp|A8F2Q0.1|RECA_RICM5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|157844685|gb|ABV85186.1| RecA [Rickettsia massiliae MTU5]
gi|376334066|gb|AFB31298.1| recombinase A [Rickettsia massiliae str. AZT80]
Length = 343
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/242 (47%), Positives = 169/242 (69%), Gaps = 12/242 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ A+ AL+Q+ +GK S++ L G R +STGSL LD+ALGIGG+PKGRI
Sbjct: 6 KERAIAAALAQIEKSYGKGSVMKL----GQRPHVDIEAVSTGSLGLDIALGIGGIPKGRI 61
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTL LH+I EAQK GG CA++D E+ALDP+ A+ +G++ + L+I+QPD+
Sbjct: 62 IEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDT 121
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +SG ID+I++DSVAAL+PK EI + +Q+R+M+QALRK+ S
Sbjct: 122 GEQALEIADTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 181
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+ +++ + +F+NQ+R K G G E T+GGNALKFYA++R+ + R+ I DK
Sbjct: 182 INRTNCITVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRIDIR--RIGSIKDKEE 236
Query: 303 IL 304
++
Sbjct: 237 VI 238
>gi|157827740|ref|YP_001496804.1| recombinase A [Rickettsia bellii OSU 85-389]
gi|166220672|sp|A8GY17.1|RECA_RICB8 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|157803044|gb|ABV79767.1| recombinase A [Rickettsia bellii OSU 85-389]
Length = 343
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/244 (47%), Positives = 170/244 (69%), Gaps = 12/244 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
+ K+ A+ AL+Q+ +GK S++ L G R +STGSL LD+ALGIGG+PKG
Sbjct: 4 IDKEKAVAAALAQIEKSYGKGSVMKL----GQRPNVDIESVSTGSLGLDIALGIGGVPKG 59
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EI+G E+SGKTTL LH+I EAQK GG CA++D E+ALDP+ A+ +G++ + L+I+QP
Sbjct: 60 RIIEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQP 119
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG ID+I++DSVAAL+PK EI + +Q+R+M+QALRK+
Sbjct: 120 DTGEQALEIADTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLT 179
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ +++ + +F+NQ+R K G G E T+GGNALKFYA++R+ + R+ I DK
Sbjct: 180 ASINRTNCITVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRIDIR--RIGSIKDK 234
Query: 301 VNIL 304
++
Sbjct: 235 EEVI 238
>gi|452990331|emb|CCQ98553.1| multifunctional SOS repair factor [Clostridium ultunense Esp]
Length = 359
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 162/235 (68%), Gaps = 3/235 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K+ + AL ALSQ+ FGK S++ L + + V+++GS+ LD+ALG+GG P+GR
Sbjct: 8 KVSDRKAALEKALSQIEKQFGKGSIMRLGEASQANQVSVVTSGSIALDVALGVGGYPRGR 67
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTT+ALH I E Q++GG A++D E+ALDP+ AE +G++ + LLI+QPD
Sbjct: 68 IIEIYGPESSGKTTVALHAIAEVQRIGGTAAFIDAEHALDPTYAEKLGVNIDELLISQPD 127
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + + L +SG+ID++V+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 128 TGEQALEICEALVRSGAIDIVVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLSG 187
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
++ +S T+ IF+NQ+R K G G E T GG ALKFYA++RL + R K
Sbjct: 188 AINKSKTIAIFINQLR--EKVGVMFGN-PETTPGGRALKFYASIRLDVRRAESIK 239
>gi|381210057|ref|ZP_09917128.1| recombinase A [Lentibacillus sp. Grbi]
Length = 349
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 157/231 (67%), Gaps = 4/231 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL +AL Q+ FGK S++ L G + I +GSL LD+ALGIGG P+GR+VEI
Sbjct: 4 KKQALDMALKQIEKQFGKGSIMKLGEQEGQKVA-TIPSGSLALDVALGIGGYPRGRVVEI 62
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH I EAQ+ GG A++D E+ALDP+ A A+G+D E LL++QPD+ E
Sbjct: 63 YGPESSGKTTVALHAIAEAQQQGGQAAFIDAEHALDPTYARALGVDIEELLLSQPDTGEQ 122
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG++D+IVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 123 ALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLSGAINK 182
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
S T +F+NQ+R K G G E T GG ALKFY+++RL + R K
Sbjct: 183 SKTTAVFINQIR--EKVGVMFGN-PETTPGGRALKFYSSVRLEVRRAETLK 230
>gi|348171421|ref|ZP_08878315.1| DNA recombination/repair [Saccharopolyspora spinosa NRRL 18395]
Length = 346
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 160/233 (68%), Gaps = 8/233 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGP--VISTGSLKLDLALGIGGLPKGRIV 123
K AL LAL+Q+ +GK S++ R R P VI TGS+ LD+ALGIGGLP+GRIV
Sbjct: 7 KGKALELALAQIDKQYGKGSVM---RLGDESRAPIEVIPTGSISLDVALGIGGLPRGRIV 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKT++ALH + AQKLGG A++D E+ALDP A+A+G+D + LL++QPD+
Sbjct: 64 EIYGPESSGKTSVALHAVANAQKLGGTAAFIDAEHALDPEYAKAIGVDTDALLVSQPDTG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG++DVIV+DSVAAL+P+ EI + + Q+R+M+QALRK+ +L
Sbjct: 124 EQALEIADMLIRSGALDVIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTSAL 183
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+ T IF+NQ+R K G G E T+GG ALKFY+++RL + R K
Sbjct: 184 YNAKTTAIFINQLR--EKVGVMFGS-PETTTGGKALKFYSSVRLDVRRIETLK 233
>gi|340000388|ref|YP_004731272.1| recombinase A [Salmonella bongori NCTC 12419]
gi|109453502|gb|ABG34231.1| RecA [Salmonella enterica]
gi|109453504|gb|ABG34232.1| RecA [Salmonella enterica]
gi|109453506|gb|ABG34233.1| RecA [Salmonella enterica]
gi|109453508|gb|ABG34234.1| RecA [Salmonella enterica]
gi|109453510|gb|ABG34235.1| RecA [Salmonella enterica]
gi|109453512|gb|ABG34236.1| RecA [Salmonella enterica]
gi|339513750|emb|CCC31507.1| RecA protein [Salmonella bongori NCTC 12419]
Length = 353
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|134098318|ref|YP_001103979.1| DNA recombination/repair protein [Saccharopolyspora erythraea NRRL
2338]
gi|291004262|ref|ZP_06562235.1| DNA recombination/repair [Saccharopolyspora erythraea NRRL 2338]
gi|166220675|sp|A4FAH9.1|RECA_SACEN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|133910941|emb|CAM01054.1| DNA recombination/repair [Saccharopolyspora erythraea NRRL 2338]
Length = 346
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 161/233 (69%), Gaps = 8/233 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGP--VISTGSLKLDLALGIGGLPKGRIV 123
K AL LAL+Q+ +GK S++ R R P VI TGS+ LD+ALGIGGLP+GRIV
Sbjct: 7 KGKALELALAQIDKQYGKGSVM---RLGDETRAPIEVIPTGSISLDVALGIGGLPRGRIV 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKT++ALH + AQKLGG A++D E+ALDP A+A+G+D ++LL++QPD+
Sbjct: 64 EVYGPESSGKTSVALHAVANAQKLGGTAAFIDAEHALDPEYAKAIGVDTDSLLVSQPDTG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG++D+IV+DSVAAL+P+ EI + + Q+R+M+QALRK+ +L
Sbjct: 124 EQALEIADMLIRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTSAL 183
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+ T IF+NQ+R K G G E T+GG ALKFY+++RL + R K
Sbjct: 184 YNAKTTAIFINQLR--EKVGVMFGS-PETTTGGKALKFYSSVRLDVRRIETLK 233
>gi|21231175|ref|NP_637092.1| recombinase A [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66768817|ref|YP_243579.1| recombinase A [Xanthomonas campestris pv. campestris str. 8004]
gi|188991932|ref|YP_001903942.1| recombinase A [Xanthomonas campestris pv. campestris str. B100]
gi|384427611|ref|YP_005636970.1| protein RecA [Xanthomonas campestris pv. raphani 756C]
gi|2500097|sp|Q60101.1|RECA_XANCP RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|76363348|sp|Q4UTR4.1|RECA_XANC8 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|229470328|sp|B0RTY3.1|RECA_XANCB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|15150333|gb|AAK85398.1|AF399933_2 RecA [Xanthomonas campestris]
gi|1322036|gb|AAC44078.1| RecA [Xanthomonas campestris pv. campestris]
gi|21112815|gb|AAM41016.1| RecA protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66574149|gb|AAY49559.1| RecA protein [Xanthomonas campestris pv. campestris str. 8004]
gi|167733692|emb|CAP51897.1| RecA protein [Xanthomonas campestris pv. campestris]
gi|341936713|gb|AEL06852.1| protein RecA [Xanthomonas campestris pv. raphani 756C]
Length = 343
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/238 (49%), Positives = 164/238 (68%), Gaps = 6/238 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSL-KRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
K AL ALSQ+ FGK S++ + R + VI TGSL LD+ALGIGGLPKGR+VE
Sbjct: 5 KKRALSAALSQIEKQFGKGSVMRMGDRVIEAVE--VIPTGSLMLDIALGIGGLPKGRVVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L I E QKLGG A++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLQAIAECQKLGGTAAFIDAEHALDPIYAAKLGVNVDDLLLSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S S+D++V+DSVAAL PK EI + Q+R+M+QALRK+ ++
Sbjct: 123 QALEIADMLVRSSSVDIVVIDSVAALTPKAEIEGEMGDQLPGLQARLMSQALRKLTGNIK 182
Query: 245 QSHTLIIFLNQVRFSAKSGQGL-GRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+TL++F+NQ+R K G + G+ EVT+GGNALKFYA++RL + R K D++
Sbjct: 183 RSNTLVVFINQLRM--KIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEI 238
>gi|78211933|ref|YP_380712.1| recombinase A [Synechococcus sp. CC9605]
gi|123770811|sp|Q3AMM5.1|RECA_SYNSC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|78196392|gb|ABB34157.1| recA protein [Synechococcus sp. CC9605]
Length = 374
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/233 (51%), Positives = 161/233 (69%), Gaps = 7/233 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSR-RGPVISTGSLKLDLALGIGGLPKGRIV 123
++D AL L L Q+ +FGK S++ L SR R ISTG+L LDLALG GG PKGR+V
Sbjct: 17 ERDKALNLVLGQIERNFGKGSIMRLGD--ASRMRVETISTGALTLDLALG-GGYPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LH I E QK GG A++D E+ALDP A ++G+D ENLL++QPD+
Sbjct: 74 EIYGPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L +VD L +S ++D++VVDSVAAL P+ EI + + AQ+R+M+QA+RKI ++
Sbjct: 134 EMALEIVDQLVRSAAVDLVVVDSVAALTPRAEIEGEMGDLAVGAQARLMSQAMRKITGNI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+S +IFLNQ+R K G G E T+GGNALKFYA++RL + R + K
Sbjct: 194 GKSGCTVIFLNQLRL--KIGVTYGN-PETTTGGNALKFYASVRLDIRRIQTLK 243
>gi|229817437|ref|ZP_04447719.1| hypothetical protein BIFANG_02699 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785226|gb|EEP21340.1| hypothetical protein BIFANG_02699 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 395
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 160/235 (68%), Gaps = 10/235 (4%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGRIVEI 125
AL AL+Q+ FGK S + L G R VI TGSL LD+ALGIGGLPKGRIVE+
Sbjct: 21 ALDTALAQVEKSFGKGSAMRL----GDRPEQNVEVIPTGSLALDMALGIGGLPKGRIVEV 76
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALHV+ AQK GG A++D E+ALDP A +G+D ++L+++QPD+ E
Sbjct: 77 YGPESSGKTTLALHVVANAQKAGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGEQ 136
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+ +L Q
Sbjct: 137 ALEIADMLIRSGALDVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKMTGALAQ 196
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
+ T IF+NQ+R K G G E T+GG ALKFY+++RL + R + K D+
Sbjct: 197 AGTTAIFINQLR--EKIGVFFGS-PETTTGGKALKFYSSVRLDIRRIQTIKNGDE 248
>gi|117924908|ref|YP_865525.1| recA protein [Magnetococcus marinus MC-1]
gi|117608664|gb|ABK44119.1| RecA protein [Magnetococcus marinus MC-1]
Length = 390
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/239 (47%), Positives = 166/239 (69%), Gaps = 6/239 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL+Q+ FGK S++ + + PV+STGSL LD+ALG+GGLP+GRIVE+
Sbjct: 16 KSKALDAALAQIERQFGKGSIMRMSEGAATDI-PVVSTGSLGLDIALGVGGLPRGRIVEV 74
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALHV E QK+GG A++D E+ALDP A +G++ + L+I+QPD+ E
Sbjct: 75 YGPESSGKTTMALHVAAEIQKVGGVAAFVDAEHALDPIYARKLGVNVDELIISQPDTGEQ 134
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D++VVDSVAAL P+ E+ + + Q+R+M+QALRK+ S+ +
Sbjct: 135 ALEITDMLVRSGAVDLVVVDSVAALTPRAELEGEMGDSHVGLQARLMSQALRKLTGSISR 194
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNIL 304
S +L++F+NQ+R K G G E T+GGNALKFYA++RL + R+ I DK ++
Sbjct: 195 SSSLVLFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDI--RRIGSIKDKEEVV 248
>gi|206890314|ref|YP_002248376.1| RecA protein [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742252|gb|ACI21309.1| RecA protein [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 342
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 11/238 (4%)
Query: 64 MQKDN--ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
M KD AL +A+SQ+ +FGK +++ L + VI TGS+ LD+A GIGG P+GR
Sbjct: 1 MNKDKLKALEIAISQIEKNFGKGAIMRLGTKAHAEGIGVIPTGSISLDIATGIGGYPRGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
++EI+G E+SGKTTLALH I EAQ+ GG A++D E+ALD + A +G+D ENLLI+QPD
Sbjct: 61 VIEIFGPESSGKTTLALHAIAEAQRHGGVAAFIDAEHALDVNYASKLGVDVENLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L V +TL +SG++D+IV+DSVAAL+PK EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEVTETLVRSGAVDIIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRM---DEVTSGGNALKFYAALRLRMMRTRLFK 296
++ +S T +IF+NQ+R Q +G M E T GG ALKFYA++RL + + K
Sbjct: 181 AISKSQTAVIFINQIR------QKIGVMFGNPETTPGGTALKFYASMRLDIRKIDTLK 232
>gi|428223540|ref|YP_007107637.1| recombinase A [Geitlerinema sp. PCC 7407]
gi|427983441|gb|AFY64585.1| RecA protein [Geitlerinema sp. PCC 7407]
Length = 361
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/241 (49%), Positives = 166/241 (68%), Gaps = 7/241 (2%)
Query: 57 PHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSR-RGPVISTGSLKLDLALGIG 115
P ++ +K AL L LSQ+ +FGK S++ L SR + IS+G++ LDLALG G
Sbjct: 3 PKTSSENTEKQKALNLVLSQIERNFGKGSIMRLGD--ASRMKVETISSGAITLDLALG-G 59
Query: 116 GLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENL 175
GLPKGR++EIYG E+SGKTTLALH I E QK GG A++D E+ALDPS + A+G+D ENL
Sbjct: 60 GLPKGRVIEIYGPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPSYSAALGVDIENL 119
Query: 176 LIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQA 235
L++QPD+ E L +VD L +S ++D++VVDSVAAL P+ EI + +Q+R+M+QA
Sbjct: 120 LVSQPDTGEMGLELVDQLVRSAAVDIVVVDSVAALTPRAEIEGEMGDAQVGSQARLMSQA 179
Query: 236 LRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLF 295
+RKI ++ +S +IFLNQ+R K G G E T+GGNALKFYA++RL + R +
Sbjct: 180 MRKITGNIGKSGCTVIFLNQLR--QKIGISYGN-PETTTGGNALKFYASVRLDIRRIQTL 236
Query: 296 K 296
K
Sbjct: 237 K 237
>gi|425092934|ref|ZP_18496018.1| protein recA [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|405611276|gb|EKB84044.1| protein recA [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
Length = 352
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRTMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|421855544|ref|ZP_16287921.1| protein RecA [Acinetobacter radioresistens DSM 6976 = NBRC 102413]
gi|403188979|dbj|GAB74122.1| protein RecA [Acinetobacter radioresistens DSM 6976 = NBRC 102413]
Length = 356
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/240 (48%), Positives = 165/240 (68%), Gaps = 10/240 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI---STGSLKLDLALGIGGLPKGR 121
Q+ AL+ AL+Q+ FG +++ L GS++ + STGSL +D+A GIGGLPKGR
Sbjct: 13 QRGAALQTALNQIEKQFGTNAIMRL----GSKKVTAVDAVSTGSLGIDIATGIGGLPKGR 68
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEI+G E+SGKTTL L I +AQK GG CA++D E+ALDP A+ +G+D + LL++QPD
Sbjct: 69 IVEIFGPESSGKTTLTLQTIAQAQKNGGVCAFVDAEHALDPQYAKKLGVDIDALLVSQPD 128
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
E L +VD L +SG++D++VVDSVAAL P+ EI + + Q+R+M+QALRKI
Sbjct: 129 HGEQALEIVDMLVRSGAVDMVVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITG 188
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +++TL++F+NQ+R K G G E T+GGNALKFYA++RL + R K AD +
Sbjct: 189 NAQKTNTLVVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGQIKEADAI 245
>gi|431794107|ref|YP_007221012.1| protein RecA [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430784333|gb|AGA69616.1| protein RecA [Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 347
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 161/231 (69%), Gaps = 3/231 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL +ALSQ+ FGK S++ L VI TG L +D+ALG+GG+P+GR++EI
Sbjct: 7 KLKALDMALSQIEKQFGKGSIMRLGEASAKMAVEVIPTGCLAIDIALGVGGVPRGRVIEI 66
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+ EAQKLGG A++D E+ALDP A+A+G++ +NLLI+QPD+ E
Sbjct: 67 YGPESSGKTTVALHIAAEAQKLGGVAAFIDAEHALDPVYAKALGVNIDNLLISQPDTGEQ 126
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG+IDVI++DSVAAL+P+ EI + + +R+M+QALRK+ ++ +
Sbjct: 127 ALEICEALVRSGAIDVIIIDSVAALVPRAEIEGEMGDSHVGLHARLMSQALRKLTGAISK 186
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
S+T +IF+NQ+R K G G E T+GG ALKFY+++R+ + R K
Sbjct: 187 SNTCVIFINQIR--EKVGIMFGN-PETTTGGRALKFYSSVRMEVRRQDTLK 234
>gi|297622180|ref|YP_003710317.1| bacterial DNA recombination protein recA [Waddlia chondrophila WSU
86-1044]
gi|297377481|gb|ADI39311.1| bacterial DNA recombination protein recA [Waddlia chondrophila WSU
86-1044]
gi|337292521|emb|CCB90538.1| protein recA [Waddlia chondrophila 2032/99]
Length = 350
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/235 (48%), Positives = 163/235 (69%), Gaps = 3/235 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
++ AL LA+S + FG+ +++SL + VI TG+L LD+ALGIGG+P+GRIVE
Sbjct: 8 ERKKALDLAVSHIKKQFGEGAIMSLGSRASQQEIGVIKTGTLALDVALGIGGVPRGRIVE 67
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGK+TLALH++ AQK GG AY+D E+ALDPS A +G++ E LLI+QPD E
Sbjct: 68 IYGPESSGKSTLALHIVANAQKSGGLAAYIDAEHALDPSYATKIGVNIEELLISQPDCGE 127
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L++ +TL +S ++DVI++DSVAAL+PK E+ I + Q+R+M+QALRK+ +L
Sbjct: 128 EALNIAETLARSNAVDVIIIDSVAALVPKSELEGEIGDSFVGLQARMMSQALRKLTATLA 187
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
+S+T +F+NQ+R K G G E T+GG ALKFY+++R+ + RT K D
Sbjct: 188 RSNTCAVFINQIR--EKIGVMYGN-PETTTGGRALKFYSSVRMEIRRTGGIKGPD 239
>gi|153003330|ref|YP_001377655.1| recA protein [Anaeromyxobacter sp. Fw109-5]
gi|152026903|gb|ABS24671.1| recA protein [Anaeromyxobacter sp. Fw109-5]
Length = 358
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/242 (47%), Positives = 164/242 (67%), Gaps = 12/242 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV-----ISTGSLKLDLALGIGGLPK 119
+K+ A+ LA+S + FGK S++ L G+ V +STGS+ LD+ALG+GG P+
Sbjct: 6 EKEKAIELAVSSIEKAFGKGSIMRL----GNEEALVKDVQAVSTGSVSLDIALGVGGFPR 61
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+EIYG E+SGKTTLALH + EAQK GG A++D E+ALD A +G+ ++LLI+Q
Sbjct: 62 GRIIEIYGPESSGKTTLALHAVAEAQKKGGIAAFVDAEHALDVGYARKLGVRTDDLLISQ 121
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + +TL +SG+IDV+VVDSVAAL+PK E+ + + Q+R+M+QALRK+
Sbjct: 122 PDTGEQALEIAETLVRSGAIDVLVVDSVAALVPKAELEGEMGDAHMGVQARLMSQALRKL 181
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
++ +S T++IF+NQ+R K G G E T+GGNALKFYA RL + R K D
Sbjct: 182 TGTISKSSTIVIFINQIRM--KIGVMFGN-PETTTGGNALKFYATQRLDIRRIGAIKDGD 238
Query: 300 KV 301
+V
Sbjct: 239 QV 240
>gi|444376501|ref|ZP_21175745.1| RecA protein [Enterovibrio sp. AK16]
gi|443679479|gb|ELT86135.1| RecA protein [Enterovibrio sp. AK16]
Length = 347
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/239 (50%), Positives = 160/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R +STGSL LD+ALG GGLP GRI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRL----GDDRTMDIETVSTGSLSLDIALGAGGLPYGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI EAQK G CA++D E+ALDP A + +D +NLL++QPD+
Sbjct: 61 VEIYGPESSGKTTLTLQVIAEAQKQGKTCAFIDAEHALDPVYARKLHVDIDNLLVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI++DSVAAL PK EI + + Q+R+++QA+RK+ +
Sbjct: 121 GEQALEIADALTRSGAVDVIIIDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTAN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 181 IKNSNTLMIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGSIKEGDEV 236
>gi|397164027|ref|ZP_10487485.1| protein RecA [Enterobacter radicincitans DSM 16656]
gi|396094582|gb|EJI92134.1| protein RecA [Enterobacter radicincitans DSM 16656]
Length = 354
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/253 (50%), Positives = 162/253 (64%), Gaps = 17/253 (6%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DV+VVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVLVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV- 238
Query: 303 ILEVVNIGSMIRL 315
IGS R+
Sbjct: 239 ------IGSETRV 245
>gi|377577345|ref|ZP_09806328.1| RecA protein [Escherichia hermannii NBRC 105704]
gi|377541873|dbj|GAB51493.1| RecA protein [Escherichia hermannii NBRC 105704]
Length = 354
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 158/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLTLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L V+ AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVVAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDEV 238
>gi|347542477|ref|YP_004857114.1| recombinase A [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346985513|dbj|BAK81188.1| recombinase A [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 356
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 164/241 (68%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
+ K A+ +A+SQ+ +GK S++ L G + +STG L LD+ALGIGGLPKG
Sbjct: 5 LDKMKAIEIAMSQIEKQYGKGSIMKL----GEQSALNIESVSTGCLDLDIALGIGGLPKG 60
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+E+YG E+SGKTT+ALHVI EAQK GG A++D E+ALDPS A+ +G+D ENL+I+QP
Sbjct: 61 RIIEVYGPESSGKTTVALHVIAEAQKKGGAAAFIDAEHALDPSYAKNLGVDTENLIISQP 120
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + + L +SG+IDVIV+DSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 121 DNGEQALEIAEALVRSGAIDVIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLA 180
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
+ +S + IF+NQ+R K G G E T GG ALKFYA++RL + R K D+
Sbjct: 181 GHINKSKCVAIFINQLR--EKVGVMFGN-PETTPGGRALKFYASVRLDVRRIDSIKQGDE 237
Query: 301 V 301
+
Sbjct: 238 I 238
>gi|152971553|ref|YP_001336662.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|238896150|ref|YP_002920886.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
gi|262043944|ref|ZP_06017029.1| recombinase A [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
gi|329999037|ref|ZP_08303292.1| RecA protein [Klebsiella sp. MS 92-3]
gi|365140024|ref|ZP_09346144.1| protein recA [Klebsiella sp. 4_1_44FAA]
gi|378980261|ref|YP_005228402.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae HS11286]
gi|386036158|ref|YP_005956071.1| recombinase A [Klebsiella pneumoniae KCTC 2242]
gi|402779349|ref|YP_006634895.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|419764367|ref|ZP_14290607.1| RecA protein [Klebsiella pneumoniae subsp. pneumoniae DSM 30104]
gi|419972489|ref|ZP_14487917.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|419980167|ref|ZP_14495453.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|419983588|ref|ZP_14498738.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|419991126|ref|ZP_14506093.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|419997255|ref|ZP_14512052.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|420001055|ref|ZP_14515712.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|420008090|ref|ZP_14522581.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|420013617|ref|ZP_14527927.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|420019459|ref|ZP_14533652.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|420024950|ref|ZP_14538961.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|420029935|ref|ZP_14543763.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|420035663|ref|ZP_14549326.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|420042530|ref|ZP_14556023.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|420048044|ref|ZP_14561359.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|420053116|ref|ZP_14566295.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|420058782|ref|ZP_14571793.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|420065304|ref|ZP_14578110.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|420070898|ref|ZP_14583547.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|420075686|ref|ZP_14588161.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|420084293|ref|ZP_14596555.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|421913376|ref|ZP_16343061.1| RecA protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421914417|ref|ZP_16344064.1| RecA protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|424832001|ref|ZP_18256729.1| protein RecA [Klebsiella pneumoniae subsp. pneumoniae Ecl8]
gi|424932153|ref|ZP_18350525.1| Protein RecA (Recombinase A) [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425082836|ref|ZP_18485933.1| protein recA [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|428147860|ref|ZP_18995763.1| RecA protein [Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428934712|ref|ZP_19008220.1| recombinase A [Klebsiella pneumoniae JHCK1]
gi|428941319|ref|ZP_19014370.1| recombinase A [Klebsiella pneumoniae VA360]
gi|449059587|ref|ZP_21737279.1| recombinase A [Klebsiella pneumoniae hvKP1]
gi|166220653|sp|A6TCW1.1|RECA_KLEP7 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|150956402|gb|ABR78432.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|238548468|dbj|BAH64819.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
gi|259038708|gb|EEW39894.1| recombinase A [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
gi|328538477|gb|EGF64592.1| RecA protein [Klebsiella sp. MS 92-3]
gi|339763286|gb|AEJ99506.1| recombinase A [Klebsiella pneumoniae KCTC 2242]
gi|363653899|gb|EHL92843.1| protein recA [Klebsiella sp. 4_1_44FAA]
gi|364519672|gb|AEW62800.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae HS11286]
gi|397346478|gb|EJJ39592.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|397350898|gb|EJJ43984.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|397355220|gb|EJJ48230.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|397363048|gb|EJJ55691.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|397364475|gb|EJJ57105.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|397372580|gb|EJJ65064.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|397379700|gb|EJJ71891.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|397383651|gb|EJJ75785.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|397389151|gb|EJJ81101.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|397398253|gb|EJJ89918.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|397402394|gb|EJJ93997.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|397407680|gb|EJJ99065.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|397415988|gb|EJK07167.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|397416332|gb|EJK07507.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|397424533|gb|EJK15431.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|397431741|gb|EJK22412.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|397436620|gb|EJK27206.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|397440984|gb|EJK31372.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|397448185|gb|EJK38364.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|397450324|gb|EJK40432.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|397742950|gb|EJK90168.1| RecA protein [Klebsiella pneumoniae subsp. pneumoniae DSM 30104]
gi|402540290|gb|AFQ64439.1| RecA protein [Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|405599155|gb|EKB72331.1| protein recA [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|407806340|gb|EKF77591.1| Protein RecA (Recombinase A) [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|410112696|emb|CCM85686.1| RecA protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410123173|emb|CCM86689.1| RecA protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|414709440|emb|CCN31144.1| protein RecA [Klebsiella pneumoniae subsp. pneumoniae Ecl8]
gi|426300665|gb|EKV62938.1| recombinase A [Klebsiella pneumoniae VA360]
gi|426302158|gb|EKV64370.1| recombinase A [Klebsiella pneumoniae JHCK1]
gi|427542181|emb|CCM91901.1| RecA protein [Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
gi|448874712|gb|EMB09747.1| recombinase A [Klebsiella pneumoniae hvKP1]
Length = 352
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRTMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|380703530|gb|AFD96734.1| RecA, partial [Rhizobium leguminosarum]
Length = 232
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 148/201 (73%), Gaps = 3/201 (1%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
ISTGSL LD+ALG+GGLP+GRI+EIYG E+SGKTTLAL I EAQK GG CA++D E+AL
Sbjct: 4 ISTGSLGLDIALGVGGLPRGRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHAL 63
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D +NLLI+QPD+ E L + DTL +SG++DV+VVDSVAAL P+ EI +
Sbjct: 64 DPVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEM 123
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALK 280
Q+R+M+QALRK+ S+ +S+T++IF+NQ+R K G G E T+GGNALK
Sbjct: 124 GDSLPGLQARLMSQALRKLTASISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALK 180
Query: 281 FYAALRLRMMRTRLFKIADKV 301
FYA++RL + R K ++V
Sbjct: 181 FYASVRLDIRRIGAVKEREEV 201
>gi|242238443|ref|YP_002986624.1| recA protein [Dickeya dadantii Ech703]
gi|242130500|gb|ACS84802.1| recA protein [Dickeya dadantii Ech703]
Length = 363
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/253 (49%), Positives = 165/253 (65%), Gaps = 17/253 (6%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG+GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGVGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGSIKDGEEV- 238
Query: 303 ILEVVNIGSMIRL 315
IGS R+
Sbjct: 239 ------IGSETRV 245
>gi|326389417|ref|ZP_08210984.1| recA protein [Thermoanaerobacter ethanolicus JW 200]
gi|345017684|ref|YP_004820037.1| protein recA [Thermoanaerobacter wiegelii Rt8.B1]
gi|392940973|ref|ZP_10306617.1| protein RecA [Thermoanaerobacter siderophilus SR4]
gi|325994422|gb|EGD52847.1| recA protein [Thermoanaerobacter ethanolicus JW 200]
gi|344033027|gb|AEM78753.1| Protein recA [Thermoanaerobacter wiegelii Rt8.B1]
gi|392292723|gb|EIW01167.1| protein RecA [Thermoanaerobacter siderophilus SR4]
Length = 341
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/239 (46%), Positives = 166/239 (69%), Gaps = 4/239 (1%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+++K AL +A+SQ+ FGK S++ L VI TGSL+LD+ALG+GG+P+GRI
Sbjct: 1 MIEKQKALEMAISQIERQFGKGSIMRLGDT-AKLNVEVIPTGSLELDIALGVGGVPRGRI 59
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTLALH+I EAQK+GG A++D E+ALDP A+ +G++ E+LL+AQPD+
Sbjct: 60 IEIFGPESSGKTTLALHMIAEAQKMGGTGAFIDAEHALDPVYAKNLGVNIEDLLVAQPDT 119
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG++D+IV+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 120 GEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLAGV 179
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S T+++F+NQ+R K G G E T GG ALKFYA +RL + + K +++
Sbjct: 180 TSKSKTIVVFINQLR--EKVGVMFGN-PETTPGGRALKFYATIRLDVRKVDAIKQGNEI 235
>gi|218245807|ref|YP_002371178.1| recombinase A [Cyanothece sp. PCC 8801]
gi|257058853|ref|YP_003136741.1| recombinase A [Cyanothece sp. PCC 8802]
gi|226737754|sp|B7JZS9.1|RECA_CYAP8 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|218166285|gb|ACK65022.1| recA protein [Cyanothece sp. PCC 8801]
gi|256589019|gb|ACU99905.1| recA protein [Cyanothece sp. PCC 8802]
Length = 349
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/231 (51%), Positives = 164/231 (70%), Gaps = 5/231 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL L L+Q+ +FGK S++ L R IS+GSL LDLALG GGLP+GRI+EI
Sbjct: 10 KEKALGLVLNQIERNFGKGSIMRLGDA-ARMRVETISSGSLTLDLALG-GGLPQGRIIEI 67
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I E QK GG A++D E+ALDP+ + A+G+D +NLL+AQPD+ E+
Sbjct: 68 YGPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPNYSNALGVDIDNLLVAQPDTGES 127
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L +VD L +S ++D++V+DSVAAL+P+ EI + Q+R+M++ALRKI ++ +
Sbjct: 128 ALEIVDQLVRSAAVDIVVIDSVAALVPRAEIEGEMGDTQVGLQARLMSKALRKIAGNIGK 187
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
S ++IFLNQ+R K G G EVT+GGNALKFYA++RL + R + K
Sbjct: 188 SGCVVIFLNQLR--QKIGVTYGS-PEVTTGGNALKFYASVRLDIRRIQTLK 235
>gi|440229530|ref|YP_007343323.1| protein RecA [Serratia marcescens FGI94]
gi|440051235|gb|AGB81138.1| protein RecA [Serratia marcescens FGI94]
Length = 350
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 159/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L ++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 LKNANTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKEGDEV 238
>gi|257454120|ref|ZP_05619393.1| protein RecA [Enhydrobacter aerosaccus SK60]
gi|257448448|gb|EEV23418.1| protein RecA [Enhydrobacter aerosaccus SK60]
Length = 351
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/250 (48%), Positives = 165/250 (66%), Gaps = 10/250 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK +++ L V+STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KAKALTAALSQIEKQFGKNTIMRLGDESAKINVDVVSTGSLGLDIALGIGGLPKGRIVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L I + QK GG CA++D E+ALDP A+ +G+D + LL+ QPD+ E
Sbjct: 65 YGPESSGKTTLTLQAIAQCQKQGGTCAFIDAEHALDPIYAKKLGVDVDALLVTQPDNGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D+IVVDSVAAL P+ EI + + Q+R+M+QALRKI + +
Sbjct: 125 ALEITDMLVRSGAVDMIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 184
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNILE 305
S+ +++F+NQ+R K G G E T+GGNALKFYA++RL + R+ + D NI
Sbjct: 185 SNCMVVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDI--RRIGAVKDGENI-- 237
Query: 306 VVNIGSMIRL 315
+GS R+
Sbjct: 238 ---VGSETRV 244
>gi|119504841|ref|ZP_01626919.1| recA protein [marine gamma proteobacterium HTCC2080]
gi|119459446|gb|EAW40543.1| recA protein [marine gamma proteobacterium HTCC2080]
Length = 347
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/238 (49%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL A+SQ+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 5 KAKALDAAMSQIERQFGKGTVM---RMGDQERVAIPSISTGSLGLDIALGIGGLPKGRIC 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ L VI EAQK GG A++D E+ALDP AE +G+ ++++++QPD+
Sbjct: 62 EIYGPESSGKTTMTLQVIAEAQKKGGTAAFIDAEHALDPQYAERLGVQVDDMIVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L V + L +SG++DV+V+DSVAAL PK EI + + Q+R+++QA+RK+ ++
Sbjct: 122 EQALEVAEMLVRSGAVDVLVIDSVAALTPKAEIEGEMGQSHVGLQARLLSQAMRKLTGAI 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
Q++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 182 KQTNCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGAVKDGDEV 236
>gi|387888225|ref|YP_006318523.1| DNA strand exchange and recombination protein [Escherichia blattae
DSM 4481]
gi|414595436|ref|ZP_11445057.1| RecA protein [Escherichia blattae NBRC 105725]
gi|386923058|gb|AFJ46012.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Escherichia blattae DSM 4481]
gi|403193600|dbj|GAB82709.1| RecA protein [Escherichia blattae NBRC 105725]
Length = 354
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRTMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIGAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|342732418|ref|YP_004771257.1| recombinase A [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|384455827|ref|YP_005668422.1| recombinase A [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|417964690|ref|ZP_12606377.1| Protein recA [Candidatus Arthromitus sp. SFB-4]
gi|417969040|ref|ZP_12610005.1| Protein recA [Candidatus Arthromitus sp. SFB-co]
gi|418016167|ref|ZP_12655732.1| recombination protein A [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|418372685|ref|ZP_12964777.1| Protein RecA [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342329873|dbj|BAK56515.1| recombinase A [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|345506502|gb|EGX28796.1| recombination protein A [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|346984170|dbj|BAK79846.1| recombinase A [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|380338611|gb|EIA27488.1| Protein recA [Candidatus Arthromitus sp. SFB-co]
gi|380340558|gb|EIA29135.1| Protein recA [Candidatus Arthromitus sp. SFB-4]
gi|380342354|gb|EIA30799.1| Protein RecA [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 357
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 164/241 (68%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
+ K A+ +A+SQ+ +GK S++ L G + +STG L LD+ALGIGGLPKG
Sbjct: 5 LDKMKAIEMAMSQIEKQYGKGSIMKL----GEQSALNIESVSTGCLDLDIALGIGGLPKG 60
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+E+YG E+SGKTT+ALHVI EAQK GG A++D E+ALDPS A+ +G+D ENL+I+QP
Sbjct: 61 RIIEVYGPESSGKTTVALHVIAEAQKKGGAAAFIDAEHALDPSYAKNLGVDTENLIISQP 120
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + + L +SG+IDVIV+DSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 121 DNGEQALEIAEALVRSGAIDVIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLA 180
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
+ +S + IF+NQ+R K G G E T GG ALKFYA++RL + R K D+
Sbjct: 181 GHINKSKCVAIFINQLR--EKVGVMFGN-PETTPGGRALKFYASVRLDVRRIDSIKQGDE 237
Query: 301 V 301
+
Sbjct: 238 I 238
>gi|83951872|ref|ZP_00960604.1| recombinase A [Roseovarius nubinhibens ISM]
gi|83836878|gb|EAP76175.1| recombinase A [Roseovarius nubinhibens ISM]
Length = 352
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/236 (49%), Positives = 158/236 (66%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 9 KQKALDSALAQIERQFGKGSIMKLGADNPVQEIEATSTGSLGLDIALGIGGLPKGRIIEI 68
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LH + E QK GG CA++D E+ALDP A +G+D + LLI+QPD+ E
Sbjct: 69 YGPESSGKTTLTLHCVAEEQKKGGVCAFVDAEHALDPIYARKLGVDLDELLISQPDTGEQ 128
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L +VDTL +SG++ ++VVDSVAAL PK E+ + Q+R+M+QA+RK+ S+ +
Sbjct: 129 ALEIVDTLVRSGAVSMVVVDSVAALTPKSELEGDMGDSNVGVQARLMSQAMRKLTGSISR 188
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S +IF+NQ+R K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 189 SKCTVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGALKDRDEV 241
>gi|408420422|ref|YP_006761836.1| recombinase A RecA [Desulfobacula toluolica Tol2]
gi|405107635|emb|CCK81132.1| RecA: recombinase A [Desulfobacula toluolica Tol2]
Length = 345
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/235 (48%), Positives = 163/235 (69%), Gaps = 10/235 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRR---GPVISTGSLKLDLALGIGGLPKGR 121
+KD A++ A+SQ+ FGK S++ L G R PVI TGSL LD ALG+GG P+GR
Sbjct: 6 EKDKAIKTAMSQIERQFGKGSIMKL----GGRAIEAVPVIRTGSLALDKALGVGGYPRGR 61
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
++EIYG E+SGKTTLALH + +AQK GG A++D E+ALD + A+ +G+D + LLI+QPD
Sbjct: 62 VIEIYGPESSGKTTLALHAVAQAQKCGGIAAFIDAEHALDVAYAKRLGVDCDELLISQPD 121
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D L +SG +D++VVDSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 122 TGEQALEIADMLVRSGGVDIMVVDSVAALVPRSEIEGDMGDSHMGLQARLMSQALRKLTG 181
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
++ +++T +IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 182 TIGKTNTTLIFINQIRM--KIGVVYGN-PETTTGGNALKFYASMRLEIRRAAPIK 233
>gi|347439037|gb|AEO92286.1| RecA protein [Escherichia coli]
gi|347439039|gb|AEO92287.1| RecA protein [Escherichia coli]
gi|347439041|gb|AEO92288.1| RecA protein [Escherichia coli]
Length = 348
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 2 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 57
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 58 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDT 117
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ S
Sbjct: 118 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGS 177
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K + V
Sbjct: 178 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGENV 233
>gi|89092117|ref|ZP_01165072.1| recombinase A [Neptuniibacter caesariensis]
gi|89083852|gb|EAR63069.1| recombinase A [Oceanospirillum sp. MED92]
Length = 346
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/238 (50%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
+ AL ALSQ+ FGK +++ R R P +STGSL LD+ALGIGGLP GRIV
Sbjct: 5 RKKALDAALSQIERQFGKGAVM---RMGDQPREAIPSVSTGSLGLDIALGIGGLPYGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L V+ EAQK G CA++D E+ALDP AE +G+D ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLQVVAEAQKQGKTCAFVDAEHALDPIYAEKLGVDVDSLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTGNV 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ L++F+NQ+R K G G E T+GGNALKFY+++RL + RT K D+V
Sbjct: 182 KSSNCLLVFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRTGAIKQGDEV 236
>gi|375335774|ref|ZP_09777118.1| recombinase A [Succinivibrionaceae bacterium WG-1]
Length = 373
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/236 (48%), Positives = 161/236 (68%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ AL Q+ FGK +++ L ISTGSL LDLALGIGGLP GRIVEI
Sbjct: 12 KAKALQAALDQIERQFGKGAIMRLGENKNITDIEAISTGSLSLDLALGIGGLPSGRIVEI 71
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L +I +AQK+G CA++D E+ALDP A +G+D +LL++QPD+ E
Sbjct: 72 YGPESSGKTTLTLELIAQAQKMGKTCAFIDAEHALDPIYAAKLGVDCNSLLLSQPDTGEQ 131
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SGS++V++VDSVAAL+PK EI + + Q+R+M+QALRK+ SL Q
Sbjct: 132 ALEICDVLVRSGSVEVVIVDSVAALVPKAEIEGDMGDSHMGLQARLMSQALRKLTGSLNQ 191
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ + +F+NQ+R K G G E T+GGNALK+YA++RL + + K+ ++V
Sbjct: 192 ANCMCVFINQLRM--KIGVMFGN-PETTTGGNALKYYASVRLDIRKGSAVKVGEEV 244
>gi|293392772|ref|ZP_06637090.1| recombination protein A [Serratia odorifera DSM 4582]
gi|291424631|gb|EFE97842.1| recombination protein A [Serratia odorifera DSM 4582]
Length = 353
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 159/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L ++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 LKNANTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKEGDEV 238
>gi|429769102|ref|ZP_19301224.1| RecA protein [Brevundimonas diminuta 470-4]
gi|429187902|gb|EKY28801.1| RecA protein [Brevundimonas diminuta 470-4]
Length = 359
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 162/236 (68%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL A++Q+ FGK S++ L + +STGSL LD+ALGIGGLP GR++E+
Sbjct: 16 KQRALEAAIAQIDRAFGKGSVMKLGKAGQVAEIESVSTGSLGLDMALGIGGLPVGRVIEV 75
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTLALH + E QK GG A++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 76 FGPESSGKTTLALHTVAEVQKKGGVAAFVDAEHALDPVYAHKLGVNLDDLLVSQPDAGEQ 135
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L +VDTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 136 ALEIVDTLVRSGAVDIVVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S +++F+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 196 SKCIVLFINQIRH--KIGVMYGS-PETTTGGNALKFYASVRLDIRRTGAIKNRDEV 248
>gi|51473929|ref|YP_067686.1| recombinase A [Rickettsia typhi str. Wilmington]
gi|383752706|ref|YP_005427806.1| recombinase A [Rickettsia typhi str. TH1527]
gi|383843541|ref|YP_005424044.1| recombinase A [Rickettsia typhi str. B9991CWPP]
gi|59798216|sp|Q68VY8.1|RECA_RICTY RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|51460241|gb|AAU04204.1| recombinase A [Rickettsia typhi str. Wilmington]
gi|380759349|gb|AFE54584.1| recombinase A [Rickettsia typhi str. TH1527]
gi|380760188|gb|AFE55422.1| recombinase A [Rickettsia typhi str. B9991CWPP]
Length = 340
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/242 (47%), Positives = 169/242 (69%), Gaps = 12/242 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ A+ AL+Q+ +GK S++ L G R ISTGSL LD+ALGIGG+PKGRI
Sbjct: 6 KERAIAAALAQIEKSYGKGSVMKL----GQRPNIDIEAISTGSLGLDIALGIGGVPKGRI 61
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTL LH+I E+QK GG CA++D E+ALDP+ A+ +G++ + L+I+QPD+
Sbjct: 62 IEIFGPESSGKTTLTLHLIAESQKNGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDT 121
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +SG ID+I++DSVAAL+PK EI + +Q+R+M+QALRK+ S
Sbjct: 122 GEQALEIADTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 181
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+ +++ + +F+NQ+R K G G E T+GGNALKFYA++R+ + R+ I DK
Sbjct: 182 INRTNCITVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRIDIR--RIGSIKDKEE 236
Query: 303 IL 304
++
Sbjct: 237 VI 238
>gi|209694225|ref|YP_002262153.1| recombinase A [Aliivibrio salmonicida LFI1238]
gi|226723624|sp|B6ENH8.1|RECA_ALISL RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|208008176|emb|CAQ78319.1| protein RecA (recombinase A) [Aliivibrio salmonicida LFI1238]
Length = 347
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/239 (50%), Positives = 160/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R +STGSL LD+ALG GGLP GRI
Sbjct: 5 KKKALAAALGQIEKQFGKGSIMKL----GDNRTMDVETVSTGSLSLDIALGAGGLPMGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A+ +G+D + LL +QPD+
Sbjct: 61 VEIYGPESSGKTTLTLEVIAQAQKAGKTCAFIDAEHALDPIYAQKLGVDIDQLLCSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L +VD L +SG++D+IVVDSVAAL PK EI + + Q+R+++QA+RK+ +
Sbjct: 121 GEQALEIVDALARSGAVDLIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+ + IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 181 LKQSNCMCIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAVKDGDEV 236
>gi|116072570|ref|ZP_01469836.1| recombinase A [Synechococcus sp. BL107]
gi|116064457|gb|EAU70217.1| recombinase A [Synechococcus sp. BL107]
Length = 376
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/242 (50%), Positives = 165/242 (68%), Gaps = 8/242 (3%)
Query: 57 PHDDAKIM-QKDNALRLALSQLANDFGKESMLSLKRFFGSR-RGPVISTGSLKLDLALGI 114
P DA+ ++D AL L L Q+ +FGK S++ L SR R ISTG+L LDLALG
Sbjct: 10 PGSDARSSGERDKALNLVLGQIERNFGKGSIMRLGD--ASRMRVETISTGALTLDLALG- 66
Query: 115 GGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAEN 174
GG PKGR+VEIYG E+SGKTTL LH I E QK GG A++D E+ALDP A ++G+D EN
Sbjct: 67 GGYPKGRVVEIYGPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPHYAASLGVDVEN 126
Query: 175 LLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQ 234
LL++QPD+ E L +VD L +S ++D++V+DSVAAL P+ EI + + +Q+R+M+Q
Sbjct: 127 LLVSQPDTGEMALEIVDQLVRSAAVDIVVIDSVAALTPRSEIEGEMGDVSVGSQARLMSQ 186
Query: 235 ALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRL 294
A+RKI ++ +S +IFLNQ+R K G G E T+GGNALKFYA++RL + R +
Sbjct: 187 AMRKITGNIGKSGCTVIFLNQLRL--KIGVMYGN-PETTTGGNALKFYASVRLDIRRIQT 243
Query: 295 FK 296
K
Sbjct: 244 LK 245
>gi|149202695|ref|ZP_01879667.1| recombinase A [Roseovarius sp. TM1035]
gi|149143977|gb|EDM32011.1| recombinase A [Roseovarius sp. TM1035]
Length = 357
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 161/243 (66%), Gaps = 3/243 (1%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D+ + K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGG+P
Sbjct: 10 DNKRNADKQKALDSALAQIERQFGKGSIMKLGGDNAVKDIEATSTGSLGLDIALGIGGIP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRIVEIYG E+SGKTTL LH + E QK GG CA++D E+ALDP A +G+D + LLI+
Sbjct: 70 KGRIVEIYGPESSGKTTLTLHCVAEEQKKGGVCAFVDAEHALDPVYARKLGVDLDELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VDTL +SG++ +IVVDSVAAL PK E+ + +R+M+QA+RK
Sbjct: 130 QPDTGEQALEIVDTLVRSGAVSMIVVDSVAALTPKSELEGEMGDSSVGVHARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +++ +IF+NQ+R K G G E T+GGNALKFY+++RL + R K
Sbjct: 190 LTGSISRTNCTVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGSIKDR 246
Query: 299 DKV 301
D+V
Sbjct: 247 DEV 249
>gi|251788612|ref|YP_003003333.1| recA protein [Dickeya zeae Ech1591]
gi|247537233|gb|ACT05854.1| recA protein [Dickeya zeae Ech1591]
Length = 358
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 160/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG+GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGVGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGSIKEGEEV 238
>gi|229487126|emb|CAX33875.1| recombinase A [Pseudochrobactrum sp. Sa 25]
Length = 247
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 146/199 (73%), Gaps = 3/199 (1%)
Query: 103 TGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDP 162
TGSL LD+ALG+GGLPKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP
Sbjct: 2 TGSLSLDIALGVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGMCAFVDAEHALDP 61
Query: 163 SLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPING 222
A +G+D E+LLI+QPD+ E L + DTL +SG+IDV+V+DSVAAL P+ EI +
Sbjct: 62 VYARKLGVDLESLLISQPDTGEQALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGDMGD 121
Query: 223 MYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFY 282
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFY
Sbjct: 122 SLPGLQARLMSQALRKLTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFY 178
Query: 283 AALRLRMMRTRLFKIADKV 301
A++RL + R K D+V
Sbjct: 179 ASVRLDIRRIGAIKDRDEV 197
>gi|194365254|ref|YP_002027864.1| recombinase A [Stenotrophomonas maltophilia R551-3]
gi|238693481|sp|B4SRB0.1|RECA_STRM5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|194348058|gb|ACF51181.1| recA protein [Stenotrophomonas maltophilia R551-3]
Length = 345
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/240 (50%), Positives = 165/240 (68%), Gaps = 10/240 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRR-GPV--ISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ + G R PV I TGSL LD+ALGIGGLPKGR+
Sbjct: 5 KKRALAAALGQIEKQFGKGSVMRM----GDRVVEPVEAIPTGSLMLDIALGIGGLPKGRV 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L I E QKLGG A++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 61 VEIYGPESSGKTTLTLQAIAECQKLGGTAAFIDAEHALDPIYAAKLGVNVDDLLLSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SGS+D++VVDSVAAL PK EI + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEIADMLVRSGSVDILVVDSVAALTPKAEIEGEMGDQLPGLQARLMSQALRKLTGN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGL-GRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S+TL++F+NQ+R K G + G+ EVT+GGNALKFYA++RL + R K D++
Sbjct: 181 IKRSNTLVVFINQLRM--KIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEI 238
>gi|109453452|gb|ABG34206.1| RecA [Salmonella enterica subsp. diarizonae]
Length = 353
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DV+VVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVLVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|417962082|ref|ZP_12604362.1| Protein recA, partial [Candidatus Arthromitus sp. SFB-2]
gi|380331197|gb|EIA22281.1| Protein recA, partial [Candidatus Arthromitus sp. SFB-2]
Length = 324
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 164/241 (68%), Gaps = 10/241 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
+ K A+ +A+SQ+ +GK S++ L G + +STG L LD+ALGIGGLPKG
Sbjct: 4 LDKMKAIEMAMSQIEKQYGKGSIMKL----GEQSALNIESVSTGCLDLDIALGIGGLPKG 59
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+E+YG E+SGKTT+ALHVI EAQK GG A++D E+ALDPS A+ +G+D ENL+I+QP
Sbjct: 60 RIIEVYGPESSGKTTVALHVIAEAQKKGGAAAFIDAEHALDPSYAKNLGVDTENLIISQP 119
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + + L +SG+IDVIV+DSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 120 DNGEQALEIAEALVRSGAIDVIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLA 179
Query: 241 YSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
+ +S + IF+NQ+R K G G E T GG ALKFYA++RL + R K D+
Sbjct: 180 GHINKSKCVAIFINQLR--EKVGVMFGN-PETTPGGRALKFYASVRLDVRRIDSIKQGDE 236
Query: 301 V 301
+
Sbjct: 237 I 237
>gi|385227923|ref|YP_005787856.1| recombinase A [Helicobacter pylori Puno120]
gi|344334361|gb|AEN14805.1| recombinase A [Helicobacter pylori Puno120]
Length = 347
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/238 (49%), Positives = 162/238 (68%), Gaps = 17/238 (7%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKGRI 122
K A+ LA+ Q+ FGK +++ L G ++ ISTGSL LDLALGIGG+PKGRI
Sbjct: 7 KQKAISLAIKQIDKVFGKGALVRL----GDKQVEKIDAISTGSLGLDLALGIGGVPKGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG E+SGKTTL+LH+I E QK GG CA++D E+ALD A+ +G+D ENLL++QPD+
Sbjct: 63 IEIYGPESSGKTTLSLHIIAECQKSGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L +++T+T+SG ID++VVDSVAAL PK EI + + Q+R+M+ ALRKI
Sbjct: 123 GEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDMGDQHVGLQARLMSHALRKITGV 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMD----EVTSGGNALKFYAALRLRMMRTRLFK 296
L + +T +IF+NQ+R +G M E T+GGNALKFYA++R+ + R K
Sbjct: 183 LHKMNTTLIFINQIRMK------IGMMGYGSPETTTGGNALKFYASVRIDIRRIAALK 234
>gi|383482652|ref|YP_005391566.1| recombinase A [Rickettsia montanensis str. OSU 85-930]
gi|378935006|gb|AFC73507.1| recombinase A [Rickettsia montanensis str. OSU 85-930]
Length = 343
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/242 (47%), Positives = 169/242 (69%), Gaps = 12/242 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ A+ AL+Q+ +GK S++ L G R +STGSL LD+ALGIGG+PKGRI
Sbjct: 6 KERAIAAALAQIEKSYGKGSVMKL----GQRPHVDIEAVSTGSLGLDIALGIGGVPKGRI 61
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTL LH+I EAQK GG CA++D E+ALDP+ A+ +G++ + L+I+QPD+
Sbjct: 62 IEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDT 121
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +SG ID+I++DSVAAL+PK EI + +Q+R+M+QALRK+ S
Sbjct: 122 GEQALEIADTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 181
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+ +++ + +F+NQ+R K G G E T+GGNALKFYA++R+ + R+ I DK
Sbjct: 182 INRTNCITVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRIDIR--RIGPIKDKEE 236
Query: 303 IL 304
++
Sbjct: 237 VI 238
>gi|84500803|ref|ZP_00999038.1| recombinase A [Oceanicola batsensis HTCC2597]
gi|84390870|gb|EAQ03288.1| recombinase A [Oceanicola batsensis HTCC2597]
Length = 359
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/243 (47%), Positives = 160/243 (65%), Gaps = 3/243 (1%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D + K AL AL+Q+ FGK S++ L R STGSL LD+ALGIGGLP
Sbjct: 10 DSKRDANKQKALDSALAQIERQFGKGSIMKLGGDNPFRDIEATSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRI+EIYG E+SGKTTL LH + E QK GG CA++D E+ALDP A +G+D + LLI+
Sbjct: 70 KGRIIEIYGPESSGKTTLTLHCVAEEQKKGGVCAFVDAEHALDPQYARKLGVDLDELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG++ +++VDSVAAL PK E+ + +R+M+QA+RK
Sbjct: 130 QPDTGEQALEITDTLVRSGAVSMVIVDSVAALTPKSELEGDMGDSSVGVHARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFY+++RL + R K
Sbjct: 190 LTGSIARSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGAIKER 246
Query: 299 DKV 301
D+V
Sbjct: 247 DEV 249
>gi|59798225|sp|Q6AE00.2|RECA_LEIXX RecName: Full=Protein RecA; AltName: Full=Recombinase A
Length = 357
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 159/233 (68%), Gaps = 8/233 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL AL+Q+ FGK S++ R R PV + TGS+ LD+ALGIGGLP+GRIV
Sbjct: 7 REKALVTALAQIDRQFGKGSVM---RLGSDERAPVEVVPTGSIALDVALGIGGLPRGRIV 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LH I AQ+ GG A++D E+ALDP A +G+D + LL++QPD+
Sbjct: 64 EIYGPESSGKTTLTLHAIANAQRAGGIAAFIDAEHALDPDYARKLGVDIDALLVSQPDTG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SGSID+IV+DSVAAL+P+ EI + + Q+R+M+QALRK+ +L
Sbjct: 124 EQALEIADMLVRSGSIDLIVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAL 183
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
Q++T +IF+NQ+R K G G E T+GG ALKFYA++RL + R K
Sbjct: 184 SQTNTTMIFINQLR--EKVGVFFGS-PETTAGGKALKFYASVRLDIRRIETLK 233
>gi|406945043|gb|EKD76653.1| hypothetical protein ACD_43C00030G0003 [uncultured bacterium]
Length = 358
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/246 (45%), Positives = 165/246 (67%), Gaps = 4/246 (1%)
Query: 56 EPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIG 115
+P D K A + A++Q+ FG +++ L + VI TG + LDLALG+G
Sbjct: 6 KPGADVAASPKTKATQAAIAQIRERFGDSAIMRLGEAT-QMKVEVIPTGCISLDLALGVG 64
Query: 116 GLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENL 175
G+P+GR+VE+YG EASGKTTLA H++ E QK+GG A++D E+ALDP A+ +G++ E L
Sbjct: 65 GVPRGRVVELYGPEASGKTTLAQHIVAEVQKIGGIAAFVDAEHALDPEYAKRIGVNVEEL 124
Query: 176 LIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQA 235
LI+QPD+ E L +V+TL +SG +DVIV+DSVAAL PK EI + + AQ+R+M++A
Sbjct: 125 LISQPDTGEQALDIVETLVRSGGVDVIVIDSVAALTPKAEIEGEMGDIQMGAQARLMSKA 184
Query: 236 LRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLF 295
LRK+ + +S T +IF+NQ+R K G G E T+GGNALKFY+++R+ + R+
Sbjct: 185 LRKLTAIVGKSGTTVIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRIEVRRSAQI 241
Query: 296 KIADKV 301
K D++
Sbjct: 242 KQGDRI 247
>gi|271501701|ref|YP_003334727.1| recA protein [Dickeya dadantii Ech586]
gi|270345256|gb|ACZ78021.1| recA protein [Dickeya dadantii Ech586]
Length = 360
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 160/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG+GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGVGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGSIKEGEEV 238
>gi|451936316|ref|YP_007460170.1| recombination protein RecA [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
gi|451777239|gb|AGF48214.1| recombination protein RecA [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
Length = 355
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/236 (49%), Positives = 160/236 (67%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL ALSQ+ FGK S++ V+STGSL LD+ALG+GGLP+GR++EI
Sbjct: 13 KEKALSAALSQIEKQFGKGSVMRYGDNDIQNDIQVVSTGSLGLDIALGVGGLPRGRVIEI 72
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L +I E QK+GG CA++D E+ALD A +GI +LLIAQPD+ E
Sbjct: 73 YGPESSGKTTLTLQIISEMQKIGGTCAFIDAEHALDVQYASKLGIVLPDLLIAQPDTGEQ 132
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SGS+D+IV+DSVAAL+PK EI + Q+R+M+QALRK+ ++ +
Sbjct: 133 ALEIADALVRSGSVDLIVIDSVAALVPKAEIEGDMGDSLPGLQARLMSQALRKLTATIKK 192
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 193 TNCMVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGSIKKGDEV 245
>gi|358458882|ref|ZP_09169087.1| Protein recA [Frankia sp. CN3]
gi|357077844|gb|EHI87298.1| Protein recA [Frankia sp. CN3]
Length = 345
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 158/233 (67%), Gaps = 8/233 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGP--VISTGSLKLDLALGIGGLPKGRIV 123
+D AL AL+Q+ FGK S++ R R P VI TGS+ LD+ALGIGGLP+GRI+
Sbjct: 6 RDKALDNALAQIDKQFGKGSVM---RLGDETRMPIQVIPTGSIALDVALGIGGLPRGRII 62
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQ GG A++D E+ALDP A +G+D +NLL++QPD+
Sbjct: 63 EIYGPESSGKTTVALHAVASAQAAGGIAAFIDAEHALDPDYASKLGVDTDNLLVSQPDTG 122
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG++D+IV+DSVAAL+P+ EI + + Q+R+M+QALRK+ +L
Sbjct: 123 EQALEIADLLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGAL 182
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
SHT IF+NQ+R K G G E T+GG ALKFYA++RL + R K
Sbjct: 183 SNSHTTAIFINQLR--EKIGVMFGS-PETTTGGKALKFYASVRLDVRRIETLK 232
>gi|334125328|ref|ZP_08499317.1| recombination protein A [Enterobacter hormaechei ATCC 49162]
gi|333386791|gb|EGK57995.1| recombination protein A [Enterobacter hormaechei ATCC 49162]
Length = 357
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 12 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 67
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L V+ AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 68 VEIYGPESSGKTTLTLQVVAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 127
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 128 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 187
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 188 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 243
>gi|255764460|ref|YP_003064605.2| recombinase A [Candidatus Liberibacter asiaticus str. psy62]
gi|254547811|gb|ACT56665.2| recombinase A [Candidatus Liberibacter asiaticus str. psy62]
Length = 363
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/244 (47%), Positives = 163/244 (66%), Gaps = 4/244 (1%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLP 118
+ I+ K AL ALSQ+ +GK +++ L G V+S+GSL LD+ALGIGG P
Sbjct: 6 EMNIVDKSKALEAALSQIQRVYGKGAIMQLGSQGSIFEGIEVVSSGSLGLDIALGIGGFP 65
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRIVEIYG E+SGKTTLALH I ++QK GG CA++D E+ALD A +G+D +NLLI+
Sbjct: 66 KGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALDSIYARKLGVDLKNLLIS 125
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + D L +SG++D+IV+DSVAAL P+ EI + Q+R+M+QALRK
Sbjct: 126 QPDTGEQALEITDMLVRSGAVDIIVIDSVAALTPRAEIEGDMGESLPGMQARLMSQALRK 185
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S +++F+NQ+R K G G E T+GGNALKFY+++RL + R K
Sbjct: 186 LTSSISRSKCILVFINQMRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRVGSIKDK 242
Query: 299 DKVN 302
D +
Sbjct: 243 DSIT 246
>gi|115376627|ref|ZP_01463857.1| RecA protein [Stigmatella aurantiaca DW4/3-1]
gi|310819426|ref|YP_003951784.1| RecA protein [Stigmatella aurantiaca DW4/3-1]
gi|115366370|gb|EAU65375.1| RecA protein [Stigmatella aurantiaca DW4/3-1]
gi|309392498|gb|ADO69957.1| RecA protein [Stigmatella aurantiaca DW4/3-1]
Length = 360
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 163/238 (68%), Gaps = 4/238 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSL-KRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+K+ A+ LA+S + FGK S++ L K +R ISTGS+ LD+ALG+GG+PKGRIV
Sbjct: 6 EKEKAIELAMSAVERQFGKGSIMRLGKDEPLTRDIQAISTGSISLDIALGVGGVPKGRIV 65
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTL LH++ EAQK GG C Y+D E+ALD A +G+ ++LL++QPD+
Sbjct: 66 EIFGPESSGKTTLCLHIVAEAQKRGGICGYIDAEHALDVGYARKLGVRTDDLLLSQPDTG 125
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + + L +SG+IDV+VVDSVAAL+PK E+ + + Q+R+M+QALRK+ ++
Sbjct: 126 EQALEIAEMLVRSGAIDVLVVDSVAALVPKAELEGEMGDAHMGVQARLMSQALRKLTGTI 185
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S T +IF+NQ+R K G G E T+GGNALKFYA+ RL + R K + V
Sbjct: 186 SKSQTCVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASQRLDIRRIGAIKNGENV 240
>gi|416274634|ref|ZP_11643753.1| RecA protein [Shigella dysenteriae CDC 74-1112]
gi|420381864|ref|ZP_14881304.1| protein RecA [Shigella dysenteriae 225-75]
gi|320173449|gb|EFW48648.1| RecA protein [Shigella dysenteriae CDC 74-1112]
gi|391299371|gb|EIQ57335.1| protein RecA [Shigella dysenteriae 225-75]
Length = 353
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +RIM+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARIMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K + V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGENV 238
>gi|410084791|ref|ZP_11281512.1| RecA protein [Morganella morganii SC01]
gi|421494115|ref|ZP_15941467.1| RECA [Morganella morganii subsp. morganii KT]
gi|455738442|ref|YP_007504708.1| RecA protein [Morganella morganii subsp. morganii KT]
gi|400191672|gb|EJO24816.1| RECA [Morganella morganii subsp. morganii KT]
gi|409768436|gb|EKN52496.1| RecA protein [Morganella morganii SC01]
gi|455420005|gb|AGG30335.1| RecA protein [Morganella morganii subsp. morganii KT]
Length = 356
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 159/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLALDVALGAGGLPLGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQRQGRVCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 LKNSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKNGDEV 238
>gi|338997260|ref|ZP_08635961.1| recombinase A [Halomonas sp. TD01]
gi|338765857|gb|EGP20788.1| recombinase A [Halomonas sp. TD01]
Length = 353
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/245 (49%), Positives = 166/245 (67%), Gaps = 11/245 (4%)
Query: 63 IMQKDN---ALRLALSQLANDFGKESMLSLKRFFGSRR--GPVISTGSLKLDLALGIGGL 117
+ Q DN AL ALSQ+ FGK +++ R + R P +STGSL LD+ALGIGGL
Sbjct: 1 MAQDDNRTKALNAALSQIDRQFGKGTVM---RLGDAPRVIMPSVSTGSLGLDIALGIGGL 57
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
P GR+ EIYG E+SGKTTL L VI +AQK G CA++D E+ALDPS AE +G++ ++LL+
Sbjct: 58 PFGRVCEIYGPESSGKTTLTLSVIAQAQKQGKVCAFVDAEHALDPSYAEKLGVNLDDLLV 117
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + D L +SG +DVIV+DSVAAL P+ EI + + Q+R+M+QALR
Sbjct: 118 SQPDTGEQALEITDMLVRSGGVDVIVIDSVAALTPRAEIEGEMGDSHVGLQARLMSQALR 177
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKI 297
KI ++ ++ L++F+NQ+R K G G E T+GGNALKFYA++RL + RT K
Sbjct: 178 KITGNIKNANCLVVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGSVKS 234
Query: 298 ADKVN 302
D+V
Sbjct: 235 GDEVT 239
>gi|33866594|ref|NP_898153.1| recombinase A [Synechococcus sp. WH 8102]
gi|50403570|sp|Q7U4K5.1|RECA_SYNPX RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|33633372|emb|CAE08577.1| RecA bacterial DNA recombination protein [Synechococcus sp. WH
8102]
Length = 375
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/233 (50%), Positives = 161/233 (69%), Gaps = 7/233 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSR-RGPVISTGSLKLDLALGIGGLPKGRIV 123
++D AL L L Q+ +FGK S++ L SR R ISTG+L LDLALG GG PKGR+V
Sbjct: 19 ERDKALNLVLGQIERNFGKGSIMRLGD--ASRMRVETISTGALTLDLALG-GGYPKGRVV 75
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LH I E QK GG A++D E+ALDP A ++G+D ENLL++QPD+
Sbjct: 76 EIYGPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPDTG 135
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L +VD L +S ++D++V+DSVAAL P+ EI + + +Q+R+M+QA+RKI ++
Sbjct: 136 EMALEIVDQLVRSAAVDIVVIDSVAALTPRAEIEGEMGDLAVGSQARLMSQAMRKITGNI 195
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+S +IFLNQ+R K G G E T+GGNALKFYA++RL + R + K
Sbjct: 196 GKSGCTVIFLNQLRL--KIGVTYGN-PETTTGGNALKFYASVRLDIRRIQTLK 245
>gi|421717710|ref|ZP_16157012.1| protein RecA [Helicobacter pylori R038b]
gi|407223217|gb|EKE93010.1| protein RecA [Helicobacter pylori R038b]
Length = 347
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 162/237 (68%), Gaps = 15/237 (6%)
Query: 66 KDNALRLALSQLANDFGKESMLSL--KRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
K A+ LA+ Q+ FGK +++ L K+ + ISTGSL LDLALGIGG+PKGRI+
Sbjct: 7 KQKAISLAIKQIDKVFGKGALVRLGDKQI---EKIDAISTGSLGLDLALGIGGVPKGRII 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL+LH+I E QK GG CA++D E+ALD A+ +G+D ENLL++QPD+
Sbjct: 64 EIYGPESSGKTTLSLHIIAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L +++T+T+SG ID++VVDSVAAL PK EI + + Q+R+M+ ALRKI L
Sbjct: 124 EQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDMGDQHVGLQARLMSHALRKITGVL 183
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMD----EVTSGGNALKFYAALRLRMMRTRLFK 296
+ +T +IF+NQ+R +G M E T+GGNALKFYA++R+ + R K
Sbjct: 184 HKMNTTLIFINQIRMK------IGMMGYGSPETTTGGNALKFYASVRIDIRRIAALK 234
>gi|386753661|ref|YP_006226879.1| recombinase A [Helicobacter pylori Shi112]
gi|384559919|gb|AFI00386.1| recombinase A [Helicobacter pylori Shi112]
Length = 347
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/238 (49%), Positives = 162/238 (68%), Gaps = 17/238 (7%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGRI 122
K A+ LA+ Q+ FGK +++ L G + + ISTGSL LDLALGIGG+PKGRI
Sbjct: 7 KQKAISLAIKQIDKVFGKGALVRL----GDKQVEKIDAISTGSLGLDLALGIGGVPKGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG E+SGKTTL+LH+I E QK GG CA++D E+ALD A+ +G+D ENLL++QPD+
Sbjct: 63 IEIYGPESSGKTTLSLHIIAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L +++T+T+SG ID++VVDSVAAL PK EI + + Q+R+M+ ALRKI
Sbjct: 123 GEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDMGDQHVGLQARLMSHALRKITGV 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMD----EVTSGGNALKFYAALRLRMMRTRLFK 296
L + +T +IF+NQ+R +G M E T+GGNALKFYA++R+ + R K
Sbjct: 183 LHKMNTTLIFINQIRMK------IGMMGYGSPETTTGGNALKFYASVRIDIRRIATLK 234
>gi|88807878|ref|ZP_01123389.1| recombinase A [Synechococcus sp. WH 7805]
gi|88787917|gb|EAR19073.1| recombinase A [Synechococcus sp. WH 7805]
Length = 382
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/238 (50%), Positives = 163/238 (68%), Gaps = 7/238 (2%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSR-RGPVISTGSLKLDLALGIGGLP 118
D + ++D AL L L Q+ +FGK S++ L SR R ISTG+L LDLALG GG P
Sbjct: 14 DVRPGERDQALNLVLGQIERNFGKGSIMRLGD--ASRMRVETISTGALTLDLALG-GGYP 70
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGR+VE+YG E+SGKTTL LH I E Q+ GG A++D E+ALDP A ++G+D ENLL++
Sbjct: 71 KGRVVEVYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAASLGVDIENLLVS 130
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VD L +S ++D++VVDSVAAL P+ EI + + AQ+R+M+QA+RK
Sbjct: 131 QPDTGEMALEIVDQLVRSAAVDIVVVDSVAALTPRAEIEGEMGDLAVGAQARLMSQAMRK 190
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
I ++ +S +IFLNQ+R K G G E T+GGNALKFYA++RL + R + K
Sbjct: 191 ITGNIGKSGCTVIFLNQLRL--KIGVTYGN-PETTTGGNALKFYASVRLDIRRIQTLK 245
>gi|420155536|ref|ZP_14662396.1| RecA protein [Clostridium sp. MSTE9]
gi|394759022|gb|EJF41834.1| RecA protein [Clostridium sp. MSTE9]
Length = 470
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 163/233 (69%), Gaps = 4/233 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL AL+Q+ FGK +++ L + + + ISTGS LD+ALGIGGLP+GRIV
Sbjct: 91 VDKSKALDTALAQIEKQFGKGAVMRLGQN-QAMQVEAISTGSFSLDMALGIGGLPRGRIV 149
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTTLALH I + QK GGY A++DVE+ALDP A A+G+D + LL++QPD+
Sbjct: 150 EVYGPESSGKTTLALHCIAQGQKNGGYAAFIDVEHALDPVYARALGVDVDALLVSQPDTG 209
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + + L +SG+IDVIVVDSVAAL+P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 210 EQALEITEALVRSGAIDVIVVDSVAALVPRAEIEGDMGDSHVGLQARLMSQALRKLAGAI 269
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+S+ + IF+NQ+R K G G EVT GG ALKFYA++R+ + +T K
Sbjct: 270 SKSNCVAIFINQLR--EKVGVIYGS-PEVTPGGRALKFYASVRIDIRKTETLK 319
>gi|281210244|gb|EFA84411.1| recombinase A [Polysphondylium pallidum PN500]
Length = 453
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/222 (48%), Positives = 162/222 (72%), Gaps = 3/222 (1%)
Query: 70 LRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGRE 129
L ++++ FGK +++ L F +++ VIS+GSL LD+ALGIGGLPKGRI+EI+G E
Sbjct: 95 LESTMAEIEKTFGKGTLMKLGTSFATQKVDVISSGSLGLDVALGIGGLPKGRIIEIFGPE 154
Query: 130 ASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSV 189
+SGKTTLALHVI +AQK GG C ++D E+AL+PS A+ +G++ + L I+QPDS E L +
Sbjct: 155 SSGKTTLALHVIAQAQKAGGNCTFIDAEHALNPSWAQKLGVNLDELFISQPDSGEQALEI 214
Query: 190 VDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTL 249
VD+L +S ++ VIVVDSVAAL+P+ E+ + + Q+R+M+QALRK+ +L +S+ +
Sbjct: 215 VDSLLRSKTMQVIVVDSVAALVPRVELEGEMGDSHVGVQARLMSQALRKLSPNLKESNCI 274
Query: 250 IIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
+IF+NQ+R K G G E T+GGNALKF++++RL + +
Sbjct: 275 LIFINQIRM--KIGVMFGN-PETTTGGNALKFFSSIRLDIRK 313
>gi|392402787|ref|YP_006439399.1| Protein recA [Turneriella parva DSM 21527]
gi|390610741|gb|AFM11893.1| Protein recA [Turneriella parva DSM 21527]
Length = 381
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/219 (50%), Positives = 158/219 (72%), Gaps = 4/219 (1%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
AL Q+ FGK +++ L R PVISTG+L LDLALG+GG+P+GRI+EIYG E+SG
Sbjct: 38 ALVQIEKQFGKGAVMKLNAD-AMREIPVISTGALSLDLALGVGGVPRGRIIEIYGPESSG 96
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTL LH++ EAQKLGG A++D E+ALDPS A +G++ + LL++QPD+ E L + +
Sbjct: 97 KTTLTLHIVAEAQKLGGMAAFIDAEHALDPSYARRLGVNIDELLVSQPDNGEQALEIAEA 156
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +S ++DVIV+DSVAAL+PK EI + Q+R+M+QALRK+ ++ +++T++IF
Sbjct: 157 LVRSNALDVIVIDSVAALVPKSEIEGDMGQATMGVQARLMSQALRKLTGAIHKTNTVVIF 216
Query: 253 LNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
+NQ+R K G G E T+GGNALKFYA++R+ + R
Sbjct: 217 INQIRM--KIGVMFGS-PETTTGGNALKFYASVRMDIRR 252
>gi|295097278|emb|CBK86368.1| RecA protein [Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 352
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L V+ AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVVAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|255994241|ref|ZP_05427376.1| protein RecA [Eubacterium saphenum ATCC 49989]
gi|255993909|gb|EEU03998.1| protein RecA [Eubacterium saphenum ATCC 49989]
Length = 376
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/239 (46%), Positives = 163/239 (68%), Gaps = 8/239 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K+ AL AL + FGK S++ L VISTG++ LD+A GIGG+P+GRIVE
Sbjct: 19 EKERALNDALDLITKQFGKGSIMRLGEGALYDEVDVISTGAISLDVATGIGGIPRGRIVE 78
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
+YG E+SGKTTL LHVI EAQK GG A++D E+ALDP A +G+D ENL+++QP + E
Sbjct: 79 VYGPESSGKTTLTLHVIAEAQKNGGRAAFIDAEHALDPEYARKLGVDVENLIVSQPSTGE 138
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
+ LS+ D L +SG+IDV+V+DSVAAL+P+ EI + + Q+R+M+QALRK+ +
Sbjct: 139 DALSICDYLVRSGAIDVVVIDSVAALVPRTEIEGEMGSAHVGLQARLMSQALRKLTGATQ 198
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRM--DEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T +IF+NQ+R + +G + E T+GG ALKFY+++RL + R+ K D +
Sbjct: 199 KSNTALIFINQLR------EKVGNIYNPETTTGGRALKFYSSMRLDVRRSESIKTGDGI 251
>gi|254524001|ref|ZP_05136056.1| protein RecA [Stenotrophomonas sp. SKA14]
gi|219721592|gb|EED40117.1| protein RecA [Stenotrophomonas sp. SKA14]
Length = 366
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/261 (47%), Positives = 173/261 (66%), Gaps = 14/261 (5%)
Query: 45 SSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRR-GPV--I 101
S++ ++ +P D+ K AL AL Q+ FGK S++ + G R PV I
Sbjct: 9 STSNDITSARTQPMDE----NKKRALAAALGQIEKQFGKGSVMRM----GDRVVEPVEAI 60
Query: 102 STGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALD 161
TGSL LD+ALGIGGLPKGR+VEIYG E+SGKTTL L I E QKLGG A++D E+ALD
Sbjct: 61 PTGSLMLDIALGIGGLPKGRVVEIYGPESSGKTTLTLQAIAECQKLGGTAAFIDAEHALD 120
Query: 162 PSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPIN 221
P A +G++ ++LL++QPD+ E L + D L +SGS+D++V+DSVAAL PK EI +
Sbjct: 121 PIYAGKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSVDILVIDSVAALTPKAEIEGEMG 180
Query: 222 GMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGL-GRMDEVTSGGNALK 280
Q+R+M+QALRK+ ++ +S+TL+IF+NQ+R K G + G+ E T+GGNALK
Sbjct: 181 DQLPGLQARLMSQALRKLTGNIKRSNTLVIFINQLRM--KIGVMMPGQSPETTTGGNALK 238
Query: 281 FYAALRLRMMRTRLFKIADKV 301
FYA++RL + R K D++
Sbjct: 239 FYASVRLDIRRIGAIKKGDEI 259
>gi|145600309|ref|YP_001164385.1| recombinase A [Yersinia pestis Pestoides F]
gi|166220693|sp|A4TQ50.1|RECA_YERPP RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|145212005|gb|ABP41412.1| RecA protein [Yersinia pestis Pestoides F]
Length = 356
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 159/240 (66%), Gaps = 10/240 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GR
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGR 61
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD
Sbjct: 62 IVEIYGPESSGKTTLALQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPD 121
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+
Sbjct: 122 TGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAG 181
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+L ++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 182 NLKNANTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKDGDVV 238
>gi|212715625|ref|ZP_03323753.1| hypothetical protein BIFCAT_00524 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212660992|gb|EEB21567.1| hypothetical protein BIFCAT_00524 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 394
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 160/235 (68%), Gaps = 10/235 (4%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEI 125
AL AL+Q+ FGK S + L G R VI TGSL LD+ALGIGGLPKGRIVEI
Sbjct: 26 ALDTALAQVEKSFGKGSAMRL----GDRPEQDVEVIPTGSLALDMALGIGGLPKGRIVEI 81
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALHV+ AQK GG A++D E+ALDP A +G+D ++L+++QPD+ E
Sbjct: 82 YGPESSGKTTLALHVVANAQKSGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGEQ 141
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+ +L Q
Sbjct: 142 ALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQ 201
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
+ T IF+NQ+R K G G E T+GG ALKFY+++R+ + R + K D+
Sbjct: 202 AGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYSSVRMDIRRIQTIKNGDE 253
>gi|421709554|ref|ZP_16148914.1| protein RecA [Helicobacter pylori R018c]
gi|421722807|ref|ZP_16162065.1| protein RecA [Helicobacter pylori R056a]
gi|407212111|gb|EKE81976.1| protein RecA [Helicobacter pylori R018c]
gi|407226097|gb|EKE95866.1| protein RecA [Helicobacter pylori R056a]
Length = 347
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/238 (49%), Positives = 162/238 (68%), Gaps = 17/238 (7%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKGRI 122
K A+ LA+ Q+ FGK +++ L G ++ ISTGSL LDLALGIGG+PKGRI
Sbjct: 7 KQKAISLAIKQIDKVFGKGALVRL----GDKQVEKIDAISTGSLGLDLALGIGGVPKGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG E+SGKTTL+LH+I E QK GG CA++D E+ALD A+ +G+D ENLL++QPD+
Sbjct: 63 IEIYGPESSGKTTLSLHIIAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L +++T+T+SG ID++VVDSVAAL PK EI + + Q+R+M+ ALRKI
Sbjct: 123 GEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDMGDQHVGLQARLMSHALRKITGV 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMD----EVTSGGNALKFYAALRLRMMRTRLFK 296
L + +T +IF+NQ+R +G M E T+GGNALKFYA++R+ + R K
Sbjct: 183 LHKMNTTLIFINQIRMK------IGMMGYGSPETTTGGNALKFYASVRIDIRRIAALK 234
>gi|171057188|ref|YP_001789537.1| recombinase A [Leptothrix cholodnii SP-6]
gi|170774633|gb|ACB32772.1| recA protein [Leptothrix cholodnii SP-6]
Length = 353
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/237 (48%), Positives = 165/237 (69%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL++AL+Q+ FGK S++ L V+STGSL LD+ALG+GGLP+GR+VE
Sbjct: 12 EKAKALQVALAQIEKQFGKGSIMRLGEGEVIEDIQVVSTGSLGLDVALGVGGLPRGRVVE 71
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI + QKL G CA++D E+ALD A+ +G++ ++LLI+QPD+ E
Sbjct: 72 IYGPESSGKTTLTLQVIAQMQKLSGVCAFIDAEHALDIQYAQKLGVNLQDLLISQPDTGE 131
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L +VD L +SGS+D+IVVDSVAAL PK E+ + Q+R+M+QALRK+ ++
Sbjct: 132 QALEIVDALVRSGSVDLIVVDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTSNIK 191
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+++ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 KTNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKKGEEV 245
>gi|449471972|ref|XP_004153457.1| PREDICTED: protein RecA-like [Cucumis sativus]
Length = 352
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L V+ AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVVAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|402830710|ref|ZP_10879406.1| RecA protein [Capnocytophaga sp. CM59]
gi|402283910|gb|EJU32417.1| RecA protein [Capnocytophaga sp. CM59]
Length = 386
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/226 (49%), Positives = 161/226 (71%), Gaps = 4/226 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+LAL +L FGK +++ L + + VI +GSL LD+ALG+GG P+GR++EI
Sbjct: 18 KAQALKLALQRLEKSFGKGTVMRLGDKV-AEKVEVIPSGSLGLDIALGVGGYPRGRVIEI 76
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G+E+SGKTTL LH I EAQKLGG A++D E+A DPS A+ +GID +NL+I+QPD+ E
Sbjct: 77 FGQESSGKTTLTLHAIAEAQKLGGSAAFIDAEHAFDPSYAKKIGIDVDNLIISQPDNGEQ 136
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L +VD L +SG++D+IVVDSVAAL PK EI + +R+M+QALRKI S+ +
Sbjct: 137 ALEIVDGLVRSGAVDIIVVDSVAALTPKTEIDGEMGDSKMGVHARLMSQALRKITGSISK 196
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
++ +++F+NQ+R K G G E T+GGNALKFY+++R+ + R
Sbjct: 197 ANCVVMFINQLR--DKIGVSFGN-PETTTGGNALKFYSSVRVDVRR 239
>gi|332981390|ref|YP_004462831.1| recA protein [Mahella australiensis 50-1 BON]
gi|332699068|gb|AEE96009.1| recA protein [Mahella australiensis 50-1 BON]
Length = 345
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/234 (46%), Positives = 166/234 (70%), Gaps = 3/234 (1%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+M+K++AL ALSQ+ FGK S++ L VI TGSL LD+ALG+GG+P+GR+
Sbjct: 1 MMEKEHALETALSQIEKRFGKGSIMKLGDDTARLNVEVIPTGSLSLDIALGVGGVPRGRV 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEI+G E+SGKTT+ALH++ +AQK+GG A++D E+ALDP+ A+ +G++ ++LL++QPD+
Sbjct: 61 VEIFGPESSGKTTVALHIVAQAQKIGGTAAFIDAEHALDPAYAKRLGVNIDDLLVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG++DV+V+DSVAAL+P+ EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEIAEALVRSGAVDVVVIDSVAALVPQAEIDGEMGDAHVGLQARLMSQALRKLTGA 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+ +S ++ IF+NQ+R K G G E T GG ALKFYA++RL + + K
Sbjct: 181 ISKSKSVAIFINQLR--EKVGVMYGN-PETTPGGRALKFYASVRLDVRKADTIK 231
>gi|448240596|ref|YP_007404649.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Serratia marcescens WW4]
gi|132238|sp|P17479.3|RECA_SERMA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|152849|gb|AAA26567.1| RecA protein [Serratia marcescens]
gi|445210960|gb|AGE16630.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Serratia marcescens WW4]
gi|453064640|gb|EMF05604.1| recombinase A [Serratia marcescens VGH107]
Length = 354
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 159/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L ++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 LKNANTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKEGDEV 238
>gi|108562576|ref|YP_626892.1| recombinase A [Helicobacter pylori HPAG1]
gi|207091965|ref|ZP_03239752.1| recombinase A [Helicobacter pylori HPKX_438_AG0C1]
gi|217031914|ref|ZP_03437416.1| hypothetical protein HPB128_3g33 [Helicobacter pylori B128]
gi|298736903|ref|YP_003729433.1| recombination protein RecA [Helicobacter pylori B8]
gi|385226420|ref|YP_005786344.1| recombinase A [Helicobacter pylori SNT49]
gi|420409530|ref|ZP_14908676.1| protein RecA [Helicobacter pylori NQ4200]
gi|420419732|ref|ZP_14918820.1| protein RecA [Helicobacter pylori NQ4161]
gi|420435055|ref|ZP_14934055.1| protein RecA [Helicobacter pylori Hp H-27]
gi|420446456|ref|ZP_14945353.1| protein RecA [Helicobacter pylori Hp H-43]
gi|420470054|ref|ZP_14968765.1| protein RecA [Helicobacter pylori Hp H-11]
gi|420493513|ref|ZP_14992084.1| protein RecA [Helicobacter pylori Hp P-16]
gi|420495252|ref|ZP_14993817.1| protein RecA [Helicobacter pylori Hp P-23]
gi|420500990|ref|ZP_14999534.1| protein RecA [Helicobacter pylori Hp P-30]
gi|420502125|ref|ZP_15000666.1| protein RecA [Helicobacter pylori Hp P-41]
gi|420505967|ref|ZP_15004482.1| protein RecA [Helicobacter pylori Hp P-74]
gi|421713515|ref|ZP_16152846.1| protein RecA [Helicobacter pylori R32b]
gi|122980560|sp|Q1CV04.1|RECA_HELPH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|107836349|gb|ABF84218.1| recombinase RecA [Helicobacter pylori HPAG1]
gi|216946383|gb|EEC24988.1| hypothetical protein HPB128_3g33 [Helicobacter pylori B128]
gi|298356097|emb|CBI66969.1| recombination protein RecA [Helicobacter pylori B8]
gi|344331333|gb|AEN16363.1| recombinase A [Helicobacter pylori SNT49]
gi|393029644|gb|EJB30724.1| protein RecA [Helicobacter pylori NQ4200]
gi|393039098|gb|EJB40130.1| protein RecA [Helicobacter pylori NQ4161]
gi|393052823|gb|EJB53769.1| protein RecA [Helicobacter pylori Hp H-27]
gi|393065328|gb|EJB66157.1| protein RecA [Helicobacter pylori Hp H-43]
gi|393087100|gb|EJB87770.1| protein RecA [Helicobacter pylori Hp H-11]
gi|393112769|gb|EJC13289.1| protein RecA [Helicobacter pylori Hp P-16]
gi|393113385|gb|EJC13904.1| protein RecA [Helicobacter pylori Hp P-23]
gi|393115472|gb|EJC15982.1| protein RecA [Helicobacter pylori Hp P-74]
gi|393149796|gb|EJC50104.1| protein RecA [Helicobacter pylori Hp P-30]
gi|393153405|gb|EJC53698.1| protein RecA [Helicobacter pylori Hp P-41]
gi|407216881|gb|EKE86718.1| protein RecA [Helicobacter pylori R32b]
Length = 347
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/238 (49%), Positives = 162/238 (68%), Gaps = 17/238 (7%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKGRI 122
K A+ LA+ Q+ FGK +++ L G ++ ISTGSL LDLALGIGG+PKGRI
Sbjct: 7 KQKAISLAIKQIDKVFGKGALVRL----GDKQVEKIDAISTGSLGLDLALGIGGVPKGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG E+SGKTTL+LH+I E QK GG CA++D E+ALD A+ +G+D ENLL++QPD+
Sbjct: 63 IEIYGPESSGKTTLSLHIIAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L +++T+T+SG ID++VVDSVAAL PK EI + + Q+R+M+ ALRKI
Sbjct: 123 GEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDMGDQHVGLQARLMSHALRKITGV 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMD----EVTSGGNALKFYAALRLRMMRTRLFK 296
L + +T +IF+NQ+R +G M E T+GGNALKFYA++R+ + R K
Sbjct: 183 LHKMNTTLIFINQIRMK------IGMMGYGSPETTTGGNALKFYASVRIDIRRIAALK 234
>gi|448746504|ref|ZP_21728171.1| DNA recombination and repair protein RecA [Halomonas titanicae BH1]
gi|445565842|gb|ELY21950.1| DNA recombination and repair protein RecA [Halomonas titanicae BH1]
Length = 357
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/243 (49%), Positives = 166/243 (68%), Gaps = 11/243 (4%)
Query: 65 QKDN---ALRLALSQLANDFGKESMLSLKRFFGSRR--GPVISTGSLKLDLALGIGGLPK 119
Q DN AL AL+Q+ FGK +++ R + R P +STGSL LD+ALGIGGLP
Sbjct: 3 QDDNRTKALNAALTQIDRQFGKGTVM---RLGDAPRVVMPSVSTGSLGLDIALGIGGLPF 59
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GR+ EI+G E+SGKTTL L VI +AQK G CA++D E+ALDPS AE +G++ ++LLI+Q
Sbjct: 60 GRVCEIFGPESSGKTTLTLSVIAQAQKQGKVCAFVDAEHALDPSYAEKLGVNLDDLLISQ 119
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + D L +SG +DVIV+DSVAAL P+ EI + + Q+R+M+QALRKI
Sbjct: 120 PDTGEQALEITDMLVRSGGVDVIVIDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKI 179
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
++ ++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K+ D
Sbjct: 180 TGNIKNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGSVKVGD 236
Query: 300 KVN 302
+V
Sbjct: 237 EVT 239
>gi|326203615|ref|ZP_08193479.1| recA protein [Clostridium papyrosolvens DSM 2782]
gi|325986435|gb|EGD47267.1| recA protein [Clostridium papyrosolvens DSM 2782]
Length = 348
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/239 (47%), Positives = 163/239 (68%), Gaps = 4/239 (1%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+++K AL +AL Q+ FGK +++ L I TGS+ LDLALG+GG+P+GRI
Sbjct: 1 MLEKKKALEMALGQIEKQFGKGAVMKLGEN-SHMNIESIPTGSMSLDLALGVGGVPRGRI 59
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VE++G E+SGKTT+ALH+I EAQK GG A++D E+ALDP A+ +G+D ENL+++QPD+
Sbjct: 60 VEVFGPESSGKTTVALHIIAEAQKAGGEAAFIDAEHALDPVYAKKLGVDIENLIVSQPDT 119
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG+ID+IV+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 120 GEQALEITEALVRSGAIDIIVIDSVAALVPKAEIDGEMGDSHIGLQARLMSQALRKLAGV 179
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+ +S T IF+NQ+R K G G E T GG ALKFY+++RL + R K A++V
Sbjct: 180 ISKSRTTAIFINQLR--EKVGVMFGN-PETTPGGRALKFYSSVRLDVRRIEAIKQANEV 235
>gi|148978203|ref|ZP_01814733.1| recombinase A [Vibrionales bacterium SWAT-3]
gi|145962625|gb|EDK27901.1| recombinase A [Vibrionales bacterium SWAT-3]
Length = 345
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/239 (50%), Positives = 159/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMKL----GENRTMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
EIYG E+SGKTTL L +I AQ+ G CA++D E+ALDP A +G+D +NLL++QPD+
Sbjct: 63 TEIYGPESSGKTTLTLELIAAAQRQGKTCAFIDAEHALDPIYARKLGVDIDNLLVSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L +VD L +SG++DV+VVDSVAAL PK EI + + Q+R+++QA+RKI +
Sbjct: 123 GEQALEIVDALARSGAVDVLVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKITGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+ + IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 183 LKQSNCMCIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAVKEGDEV 238
>gi|440286458|ref|YP_007339223.1| protein RecA [Enterobacteriaceae bacterium strain FGI 57]
gi|440045980|gb|AGB77038.1| protein RecA [Enterobacteriaceae bacterium strain FGI 57]
Length = 354
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/253 (50%), Positives = 162/253 (64%), Gaps = 17/253 (6%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRTMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DV+VVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVLVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV- 238
Query: 303 ILEVVNIGSMIRL 315
IGS R+
Sbjct: 239 ------IGSETRV 245
>gi|167037603|ref|YP_001665181.1| recombinase A [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167040264|ref|YP_001663249.1| recombinase A [Thermoanaerobacter sp. X514]
gi|256750811|ref|ZP_05491696.1| recA protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300914348|ref|ZP_07131664.1| recA protein [Thermoanaerobacter sp. X561]
gi|307724416|ref|YP_003904167.1| recA protein [Thermoanaerobacter sp. X513]
gi|320116018|ref|YP_004186177.1| recA protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166854504|gb|ABY92913.1| recA protein [Thermoanaerobacter sp. X514]
gi|166856437|gb|ABY94845.1| recA protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256750394|gb|EEU63413.1| recA protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300889283|gb|EFK84429.1| recA protein [Thermoanaerobacter sp. X561]
gi|307581477|gb|ADN54876.1| recA protein [Thermoanaerobacter sp. X513]
gi|319929109|gb|ADV79794.1| recA protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 341
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/239 (46%), Positives = 166/239 (69%), Gaps = 4/239 (1%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+++K AL +A+SQ+ FGK S++ L VI TGSL+LD+ALG+GG+P+GRI
Sbjct: 1 MIEKQKALEMAISQIERQFGKGSIMRLGDT-AKLNVEVIPTGSLELDIALGVGGVPRGRI 59
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTLALH+I EAQK+GG A++D E+ALDP A+ +G++ E+LL+AQPD+
Sbjct: 60 IEIFGPESSGKTTLALHMIAEAQKMGGTGAFIDAEHALDPVYAKNLGVNIEDLLVAQPDT 119
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG++D+IV+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 120 GEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLAGV 179
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S T+++F+NQ+R K G G E T GG ALKFYA +RL + + K +++
Sbjct: 180 TSKSKTIVVFINQLR--EKVGVLFGN-PETTPGGRALKFYATIRLDVRKVDAIKQGNEI 235
>gi|308182328|ref|YP_003926455.1| recombinase A [Helicobacter pylori PeCan4]
gi|385220019|ref|YP_005781491.1| recombinase A [Helicobacter pylori India7]
gi|386750587|ref|YP_006223807.1| recombinase A [Helicobacter pylori Shi417]
gi|386752134|ref|YP_006225353.1| recombinase A [Helicobacter pylori Shi169]
gi|420459660|ref|ZP_14958459.1| protein RecA [Helicobacter pylori Hp A-27]
gi|420492090|ref|ZP_14990665.1| protein RecA [Helicobacter pylori Hp P-15]
gi|420525854|ref|ZP_15024256.1| protein RecA [Helicobacter pylori Hp P-15b]
gi|308064513|gb|ADO06405.1| recombinase A [Helicobacter pylori PeCan4]
gi|317008826|gb|ADU79406.1| recombinase A [Helicobacter pylori India7]
gi|384556845|gb|AFH97313.1| recombinase A [Helicobacter pylori Shi417]
gi|384558392|gb|AFH98859.1| recombinase A [Helicobacter pylori Shi169]
gi|393076762|gb|EJB77511.1| protein RecA [Helicobacter pylori Hp A-27]
gi|393107891|gb|EJC08430.1| protein RecA [Helicobacter pylori Hp P-15]
gi|393132599|gb|EJC33018.1| protein RecA [Helicobacter pylori Hp P-15b]
Length = 347
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/238 (49%), Positives = 162/238 (68%), Gaps = 17/238 (7%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKGRI 122
K A+ LA+ Q+ FGK +++ L G ++ ISTGSL LDLALGIGG+PKGRI
Sbjct: 7 KQKAISLAIKQIDKVFGKGALVRL----GDKQVEKIDAISTGSLGLDLALGIGGVPKGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG E+SGKTTL+LH+I E QK GG CA++D E+ALD A+ +G+D ENLL++QPD+
Sbjct: 63 IEIYGPESSGKTTLSLHIIAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L +++T+T+SG ID++VVDSVAAL PK EI + + Q+R+M+ ALRKI
Sbjct: 123 GEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDMGDQHVGLQARLMSHALRKITGV 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMD----EVTSGGNALKFYAALRLRMMRTRLFK 296
L + +T +IF+NQ+R +G M E T+GGNALKFYA++R+ + R K
Sbjct: 183 LHKMNTTLIFINQIRMK------IGMMGYGSPETTTGGNALKFYASVRIDIRRIAALK 234
>gi|33241165|ref|NP_876107.1| recombinase A [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|60393014|sp|Q7V9V8.1|RECA_PROMA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|33238695|gb|AAQ00760.1| RecA recombinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 379
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/240 (49%), Positives = 163/240 (67%), Gaps = 5/240 (2%)
Query: 57 PHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGG 116
P ++A+ ++D AL L L Q+ +FGK S++ L R ISTG+L LDLALG GG
Sbjct: 16 PPNEARSGERDKALSLVLGQIERNFGKGSIMRLGDA-SKMRVETISTGALTLDLALG-GG 73
Query: 117 LPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLL 176
PKGR+VE+YG E+SGKTTL LH I E QK GG A++D E+ALDP A ++G+D ENLL
Sbjct: 74 YPKGRVVEVYGPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAASLGVDIENLL 133
Query: 177 IAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQAL 236
++QPD+ E L +VD L +S ++D++VVDSVAAL P+ EI + +Q+R+M+QA+
Sbjct: 134 VSQPDTGEMALEIVDQLIRSSAVDLVVVDSVAALTPRSEIEGEMGDHAVGSQARLMSQAM 193
Query: 237 RKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
RKI ++ +S +IFLNQ+R K G G E T+GGNALKFYA++RL + R + K
Sbjct: 194 RKITGNIGKSGCTVIFLNQLRL--KIGVTYGN-PETTTGGNALKFYASVRLDIRRIQTLK 250
>gi|331269615|ref|YP_004396107.1| recA protein [Clostridium botulinum BKT015925]
gi|329126165|gb|AEB76110.1| recA protein [Clostridium botulinum BKT015925]
Length = 348
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 164/238 (68%), Gaps = 10/238 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
+K AL+ AL+Q+ FGK S++ L G + ISTGSL LD+ALGIGG+P+GR
Sbjct: 4 EKMKALQAALTQIEKQFGKGSVMKL----GEEKVLNIEAISTGSLSLDIALGIGGIPRGR 59
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EI+G E+SGKTT+ALH++ EAQK GG A++D E+ALDP A+A+G+D +NL+++QPD
Sbjct: 60 IIEIFGPESSGKTTVALHIVAEAQKAGGTAAFIDAEHALDPVYAKALGVDIDNLIVSQPD 119
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + + L +SG++D+IVVDSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 120 TGEQALEICEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLTG 179
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
S+ +S IF+NQ+R K G G E T GG ALKFYA++RL + + + K D
Sbjct: 180 SINKSKCAAIFINQLR--EKVGIMFGN-PETTPGGRALKFYASVRLDVRKIEIIKQGD 234
>gi|422022022|ref|ZP_16368531.1| recombinase A [Providencia sneebia DSM 19967]
gi|414097772|gb|EKT59425.1| recombinase A [Providencia sneebia DSM 19967]
Length = 354
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 159/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDVALGAGGLPLGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQRSGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L S+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 LKTSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKNGDEV 238
>gi|307132213|ref|YP_003884229.1| DNA strand exchange and recombination protein [Dickeya dadantii
3937]
gi|306529742|gb|ADM99672.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Dickeya dadantii 3937]
Length = 358
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 160/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG+GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGVGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQRGGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGSIKEGEEV 238
>gi|359393877|ref|ZP_09186930.1| Protein recA [Halomonas boliviensis LC1]
gi|357971124|gb|EHJ93569.1| Protein recA [Halomonas boliviensis LC1]
Length = 357
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/243 (49%), Positives = 166/243 (68%), Gaps = 11/243 (4%)
Query: 65 QKDN---ALRLALSQLANDFGKESMLSLKRFFGSRR--GPVISTGSLKLDLALGIGGLPK 119
Q DN AL AL+Q+ FGK +++ R + R P +STGSL LD+ALGIGGLP
Sbjct: 3 QDDNRTKALNAALTQIDRQFGKGTVM---RLGDAPRVVMPSVSTGSLGLDIALGIGGLPF 59
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GR+ EI+G E+SGKTTL L VI +AQK G CA++D E+ALDPS AE +G++ ++LL++Q
Sbjct: 60 GRVCEIFGPESSGKTTLTLSVIAQAQKQGKVCAFVDAEHALDPSYAEKLGVNLDDLLVSQ 119
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + D L +SG +DVIV+DSVAAL P+ EI + + Q+R+M+QALRKI
Sbjct: 120 PDTGEQALEITDMLVRSGGVDVIVIDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKI 179
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
++ ++ L+IF+NQ+R K G G E T+GGNALKFYA++RL + RT K+ D
Sbjct: 180 TGNIKNANCLVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGSVKVGD 236
Query: 300 KVN 302
+V
Sbjct: 237 EVT 239
>gi|329943334|ref|ZP_08292108.1| protein RecA [Chlamydophila psittaci Cal10]
gi|332287910|ref|YP_004422811.1| recombinase A [Chlamydophila psittaci 6BC]
gi|384451081|ref|YP_005663681.1| recA protein [Chlamydophila psittaci 6BC]
gi|384452065|ref|YP_005664663.1| recombinase A [Chlamydophila psittaci 01DC11]
gi|384453039|ref|YP_005665636.1| recombinase A [Chlamydophila psittaci 08DC60]
gi|384454018|ref|YP_005666614.1| recombinase A [Chlamydophila psittaci C19/98]
gi|384454997|ref|YP_005667592.1| recombinase A [Chlamydophila psittaci 02DC15]
gi|392377140|ref|YP_004064918.1| recombinase A [Chlamydophila psittaci RD1]
gi|406592901|ref|YP_006740081.1| protein RecA [Chlamydia psittaci CP3]
gi|406593948|ref|YP_006741127.1| protein RecA [Chlamydia psittaci NJ1]
gi|406594774|ref|YP_006742162.1| protein RecA [Chlamydia psittaci MN]
gi|407454578|ref|YP_006733686.1| protein RecA [Chlamydia psittaci 84/55]
gi|407455838|ref|YP_006734729.1| protein RecA [Chlamydia psittaci GR9]
gi|407457264|ref|YP_006735837.1| protein RecA [Chlamydia psittaci VS225]
gi|407458576|ref|YP_006736881.1| protein RecA [Chlamydia psittaci WS/RT/E30]
gi|407459819|ref|YP_006737922.1| protein RecA [Chlamydia psittaci M56]
gi|407461192|ref|YP_006738967.1| protein RecA [Chlamydia psittaci WC]
gi|410858923|ref|YP_006974863.1| recombinase A [Chlamydia psittaci 01DC12]
gi|449071642|ref|YP_007438722.1| recombinase A [Chlamydophila psittaci Mat116]
gi|313848483|emb|CBY17487.1| recombinase A [Chlamydophila psittaci RD1]
gi|325506502|gb|ADZ18140.1| recombinase A [Chlamydophila psittaci 6BC]
gi|328814881|gb|EGF84871.1| protein RecA [Chlamydophila psittaci Cal10]
gi|328915175|gb|AEB56008.1| recA protein [Chlamydophila psittaci 6BC]
gi|334692799|gb|AEG86018.1| recombinase A [Chlamydophila psittaci C19/98]
gi|334693775|gb|AEG86993.1| recombinase A [Chlamydophila psittaci 01DC11]
gi|334694754|gb|AEG87971.1| recombinase A [Chlamydophila psittaci 02DC15]
gi|334695728|gb|AEG88944.1| recombinase A [Chlamydophila psittaci 08DC60]
gi|405781337|gb|AFS20087.1| protein RecA [Chlamydia psittaci 84/55]
gi|405782381|gb|AFS21130.1| protein RecA [Chlamydia psittaci GR9]
gi|405783206|gb|AFS21954.1| protein RecA [Chlamydia psittaci MN]
gi|405784525|gb|AFS23272.1| protein RecA [Chlamydia psittaci VS225]
gi|405784859|gb|AFS23605.1| protein RecA [Chlamydia psittaci WS/RT/E30]
gi|405785964|gb|AFS24709.1| protein RecA [Chlamydia psittaci M56]
gi|405787498|gb|AFS26242.1| protein RecA [Chlamydia psittaci WC]
gi|405788773|gb|AFS27516.1| protein RecA [Chlamydia psittaci CP3]
gi|405789820|gb|AFS28562.1| protein RecA [Chlamydia psittaci NJ1]
gi|410811818|emb|CCO02473.1| recombinase A [Chlamydia psittaci 01DC12]
gi|449040150|gb|AGE75574.1| recombinase A [Chlamydophila psittaci Mat116]
Length = 349
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 158/231 (68%), Gaps = 3/231 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL A++ + FG S++SL + S I TG+L LDLALGIGG+PKGRIVEI
Sbjct: 6 RKKALEAAIAYIEKQFGSGSIMSLGKHSASHEISTIKTGALSLDLALGIGGVPKGRIVEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTLA H++ AQK+GG AY+D E+ALDPS A +G + +L+I+QPD E+
Sbjct: 66 FGPESSGKTTLATHIVANAQKMGGVAAYIDAEHALDPSYASLIGANINDLMISQPDCGED 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
LS+ + L +SG++DVIV+DSVAAL+PK E+ I ++ Q+R+M+QALRK+ +L +
Sbjct: 126 ALSIAELLARSGAVDVIVIDSVAALVPKSELEGDIGDVHVGLQARMMSQALRKLTATLAR 185
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
S T IF+NQ+R K G G E T+GG ALKFY+++R+ + R K
Sbjct: 186 SQTCAIFINQIR--EKIGVSFGN-PETTTGGRALKFYSSIRMDIRRIGAIK 233
>gi|134122758|dbj|BAF49677.1| RecA [Physcomitrella patens]
Length = 435
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/247 (47%), Positives = 169/247 (68%), Gaps = 5/247 (2%)
Query: 55 DEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALG 113
D P+ D + K + ++ A+ Q+A GKE+++ L R SR V+ TGSL LD+ALG
Sbjct: 67 DNPNLDHE-YSKQSLIQAAIDQIAKKHGKETVMWLGR--ESRDFIDVVPTGSLNLDIALG 123
Query: 114 IGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLG-GYCAYLDVENALDPSLAEAMGIDA 172
+GGLPKGR+VEI+G+EASGKTT+ALHVI +AQK+G G+C ++D E+ALD AE +G++
Sbjct: 124 VGGLPKGRVVEIFGQEASGKTTIALHVIAQAQKMGKGHCLFVDAEHALDMQFAEGIGVNT 183
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
++LL QPD AE L VD +S +DVIVVDSVAAL+PK E+ + Q+R+M
Sbjct: 184 KDLLFVQPDYAEQALDTVDHFVRSTGVDVIVVDSVAALVPKAELEGDMGDSQMALQARLM 243
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRT 292
++ALR++ +SL S+ L+IF+NQ R + G G EVT+GGNALKFYA++RL++ +
Sbjct: 244 SKALRRLTHSLNSSNCLLIFINQTRAKLNTYGGGGPTAEVTAGGNALKFYASVRLQVRKK 303
Query: 293 RLFKIAD 299
+ D
Sbjct: 304 EQLRRGD 310
>gi|428206763|ref|YP_007091116.1| recombinase A [Chroococcidiopsis thermalis PCC 7203]
gi|428008684|gb|AFY87247.1| RecA protein [Chroococcidiopsis thermalis PCC 7203]
Length = 358
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/231 (50%), Positives = 161/231 (69%), Gaps = 5/231 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL L L+Q+ +FGK +++ L R IS+GSL LDLALG GGLPKGR++EI
Sbjct: 10 KQKALNLVLNQIERNFGKGAIVRLGDAT-RMRVETISSGSLTLDLALG-GGLPKGRVIEI 67
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH I E QK GG A++D E+ALDP+ A A+G+D ENLL++QPD+ E
Sbjct: 68 YGPESSGKTTVALHAIAEVQKAGGIAAFVDAEHALDPTYAAALGVDIENLLVSQPDTGEA 127
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L +VD L +S ++D+++VDSVAAL+P+ EI + + Q+R+M+QALRKI ++ +
Sbjct: 128 GLEIVDQLVRSAAVDIVIVDSVAALVPRAEIEGEMGDTHVGLQARLMSQALRKITGNIGK 187
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
S +IFLNQ+R K G G E T+GGNALKFYA++RL + R + K
Sbjct: 188 SGCTVIFLNQLR--QKIGVTYGN-PETTTGGNALKFYASVRLDIRRIQTLK 235
>gi|399992715|ref|YP_006572955.1| protein recA (recombinase A) [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
gi|400754395|ref|YP_006562763.1| protein RecA [Phaeobacter gallaeciensis 2.10]
gi|398653548|gb|AFO87518.1| protein RecA [Phaeobacter gallaeciensis 2.10]
gi|398657270|gb|AFO91236.1| protein recA (recombinase A) [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
Length = 355
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 161/243 (66%), Gaps = 3/243 (1%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D+ K K AL AL+Q+ FGK S++ L STGSL LD+ALGIGGLP
Sbjct: 9 DNKKSGDKQKALDSALAQIERQFGKGSIMKLGDGNPLNEIEASSTGSLGLDIALGIGGLP 68
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
GRIVEIYG E+SGKTTL LH I E QK GG CA++D E+ALDP A +G+D + LLI+
Sbjct: 69 MGRIVEIYGPESSGKTTLTLHCIAEQQKKGGVCAFVDAEHALDPQYAAKLGVDLDELLIS 128
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG++++++VDSVAAL PK E+ + Q+R+M+QA+RK
Sbjct: 129 QPDTGEQALEITDTLVRSGAVNMVIVDSVAALTPKSELEGDMGDSSVGVQARLMSQAMRK 188
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFY+++RL + R K
Sbjct: 189 LTGSISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGAIKDR 245
Query: 299 DKV 301
D+V
Sbjct: 246 DEV 248
>gi|441504449|ref|ZP_20986443.1| RecA protein [Photobacterium sp. AK15]
gi|441427916|gb|ELR65384.1| RecA protein [Photobacterium sp. AK15]
Length = 350
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/239 (50%), Positives = 159/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R +STGSL LD+ALG GGLP GRI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMKL----GDNRTMDIETVSTGSLSLDIALGAGGLPMGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQK G CA++D E+ALDP A+ +G+D +NLL++QPD+
Sbjct: 61 VEIYGPESSGKTTLTLEVIAAAQKQGKTCAFIDAEHALDPIYAQKLGVDIDNLLVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++D++VVDSVAAL PK EI + + Q+R+++QA+RKI +
Sbjct: 121 GEQALEIADALARSGAVDIMVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKITGN 180
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L S+ + IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 181 LKASNCMCIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDGDEV 236
>gi|419959708|ref|ZP_14475759.1| recombinase A [Enterobacter cloacae subsp. cloacae GS1]
gi|388605385|gb|EIM34604.1| recombinase A [Enterobacter cloacae subsp. cloacae GS1]
Length = 248
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L V+ AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVVAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDNV 238
>gi|157369086|ref|YP_001477075.1| recombinase A [Serratia proteamaculans 568]
gi|166918716|sp|A8GA07.1|RECA_SERP5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|157320850|gb|ABV39947.1| recA protein [Serratia proteamaculans 568]
Length = 353
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 159/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L ++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 LKNANTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDEV 238
>gi|386594562|ref|YP_006090962.1| recA protein [Escherichia coli DH1]
gi|387622382|ref|YP_006130010.1| recombinase A [Escherichia coli DH1]
gi|260448251|gb|ACX38673.1| recA protein [Escherichia coli DH1]
gi|315137306|dbj|BAJ44465.1| RecA protein [Escherichia coli DH1]
Length = 353
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 158/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I+ + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIDDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K + V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGENV 238
>gi|254475519|ref|ZP_05088905.1| protein RecA [Ruegeria sp. R11]
gi|214029762|gb|EEB70597.1| protein RecA [Ruegeria sp. R11]
Length = 355
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 161/243 (66%), Gaps = 3/243 (1%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D+ K K AL AL+Q+ FGK S++ L STGSL LD+ALGIGGLP
Sbjct: 9 DNKKSGDKQKALDSALAQIERQFGKGSIMKLGDGNPLNEIEASSTGSLGLDIALGIGGLP 68
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
GRIVEIYG E+SGKTTL LH I E QK GG CA++D E+ALDP A +G+D + LLI+
Sbjct: 69 MGRIVEIYGPESSGKTTLTLHCIAEQQKKGGVCAFVDAEHALDPQYAAKLGVDLDELLIS 128
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG++++++VDSVAAL PK E+ + Q+R+M+QA+RK
Sbjct: 129 QPDTGEQALEITDTLVRSGAVNMVIVDSVAALTPKSELEGDMGDSNVGVQARLMSQAMRK 188
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFY+++RL + R K
Sbjct: 189 LTGSISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGAIKDR 245
Query: 299 DKV 301
D+V
Sbjct: 246 DEV 248
>gi|270264043|ref|ZP_06192311.1| DNA integration/recombination/invertion protein [Serratia odorifera
4Rx13]
gi|333925648|ref|YP_004499227.1| protein recA [Serratia sp. AS12]
gi|333930601|ref|YP_004504179.1| recombinase A [Serratia plymuthica AS9]
gi|386327472|ref|YP_006023642.1| protein recA [Serratia sp. AS13]
gi|386823225|ref|ZP_10110380.1| recombinase A [Serratia plymuthica PRI-2C]
gi|421781727|ref|ZP_16218192.1| protein RecA [Serratia plymuthica A30]
gi|270042236|gb|EFA15332.1| DNA integration/recombination/invertion protein [Serratia odorifera
4Rx13]
gi|333472208|gb|AEF43918.1| Protein recA [Serratia plymuthica AS9]
gi|333489708|gb|AEF48870.1| Protein recA [Serratia sp. AS12]
gi|333959805|gb|AEG26578.1| Protein recA [Serratia sp. AS13]
gi|386380012|gb|EIJ20794.1| recombinase A [Serratia plymuthica PRI-2C]
gi|407756293|gb|EKF66411.1| protein RecA [Serratia plymuthica A30]
Length = 354
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 159/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L ++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 183 LKNANTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGDEV 238
>gi|289578367|ref|YP_003476994.1| recA protein [Thermoanaerobacter italicus Ab9]
gi|297544644|ref|YP_003676946.1| recA protein [Thermoanaerobacter mathranii subsp. mathranii str.
A3]
gi|289528080|gb|ADD02432.1| recA protein [Thermoanaerobacter italicus Ab9]
gi|296842419|gb|ADH60935.1| recA protein [Thermoanaerobacter mathranii subsp. mathranii str.
A3]
Length = 341
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/239 (46%), Positives = 166/239 (69%), Gaps = 4/239 (1%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+++K AL +A+SQ+ FGK S++ L VI TGSL+LD+ALG+GG+P+GRI
Sbjct: 1 MIEKQKALEMAISQIERQFGKGSIMRLGDT-AKLNVEVIPTGSLELDIALGVGGVPRGRI 59
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTLALH+I EAQK+GG A++D E+ALDP A+ +G++ E+LL+AQPD+
Sbjct: 60 IEIFGPESSGKTTLALHMIAEAQKMGGTGAFIDAEHALDPVYAKNLGVNIEDLLVAQPDT 119
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG++D+IV+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 120 GEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLAGV 179
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S T+++F+NQ+R K G G E T GG ALKFYA +RL + + K +++
Sbjct: 180 TSKSKTIVVFINQLR--EKVGIMFGN-PETTPGGRALKFYATIRLDVRKVDPIKQGNEI 235
>gi|257056758|ref|YP_003134590.1| protein RecA [Saccharomonospora viridis DSM 43017]
gi|256586630|gb|ACU97763.1| protein RecA [Saccharomonospora viridis DSM 43017]
Length = 345
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 160/233 (68%), Gaps = 8/233 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
K AL LAL+Q+ FGK S++ L R PV I TG++ LD+ALGIGGLP+GRIV
Sbjct: 7 KGKALDLALAQIDKQFGKGSVMRLGE---ESRPPVEVIPTGAIALDIALGIGGLPRGRIV 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A+A+G+D ++LL++QPD+
Sbjct: 64 EIYGPESSGKTTVALHAVANAQKAGGIAAFIDAEHALDPEYAKALGVDTDSLLVSQPDTG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG++D++V+DSVAAL+P+ EI + + Q+R+M+QALRKI +L
Sbjct: 124 EQALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGAL 183
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
S T IF+NQ+R K G G E T+GG ALKFYA++RL + R K
Sbjct: 184 HNSGTTAIFINQLR--EKVGVMFGS-PETTTGGKALKFYASVRLDVRRIETLK 233
>gi|225351347|ref|ZP_03742370.1| hypothetical protein BIFPSEUDO_02941 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225157691|gb|EEG70974.1| hypothetical protein BIFPSEUDO_02941 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 394
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 160/235 (68%), Gaps = 10/235 (4%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEI 125
AL AL+Q+ FGK S + L G R VI TGSL LD+ALGIGGLPKGRIVEI
Sbjct: 26 ALDTALAQVEKSFGKGSAMRL----GDRPEQDVEVIPTGSLALDMALGIGGLPKGRIVEI 81
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALHV+ AQK GG A++D E+ALDP A +G+D ++L+++QPD+ E
Sbjct: 82 YGPESSGKTTLALHVVANAQKNGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGEQ 141
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+ +L Q
Sbjct: 142 ALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQ 201
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
+ T IF+NQ+R K G G E T+GG ALKFY+++R+ + R + K D+
Sbjct: 202 AGTTAIFINQLR--EKIGVFFGN-PETTTGGKALKFYSSVRMDIRRIQTIKNGDE 253
>gi|254512103|ref|ZP_05124170.1| protein RecA [Rhodobacteraceae bacterium KLH11]
gi|221535814|gb|EEE38802.1| protein RecA [Rhodobacteraceae bacterium KLH11]
Length = 354
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/242 (49%), Positives = 161/242 (66%), Gaps = 4/242 (1%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
D K K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGLP
Sbjct: 9 DKKNADKQKALDSALAQIERQFGKGSIMKLGED-AKQDIEASSTGSLGLDIALGIGGLPM 67
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRIVEIYG E+SGKTTL LH I E QK GG CA++D E+ALDP A +G+D + LLI+Q
Sbjct: 68 GRIVEIYGPESSGKTTLTLHCIAEQQKRGGVCAFVDAEHALDPQYARKLGVDLDELLISQ 127
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG+++++VVDSVAAL PK E+ + Q+R+M+QA+RK+
Sbjct: 128 PDTGEQALEITDTLVRSGAVNMVVVDSVAALTPKSELEGDMGDSNVGVQARLMSQAMRKL 187
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
S+ +S+ ++IF+NQ+R K G G E T+GGNALKFY+++RL + R K D
Sbjct: 188 TGSISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGAIKDRD 244
Query: 300 KV 301
+V
Sbjct: 245 EV 246
>gi|62185564|ref|YP_220349.1| recombinase A [Chlamydophila abortus S26/3]
gi|76363323|sp|Q5L4P3.1|RECA_CHLAB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|62148631|emb|CAH64403.1| recombinase A [Chlamydophila abortus S26/3]
Length = 349
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 158/231 (68%), Gaps = 3/231 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL A++ + FG S++SL + S I TG+L LDLALGIGG+PKGRIVEI
Sbjct: 6 RKKALEAAIAYIEKQFGSGSIMSLGKHSASHEISTIKTGALSLDLALGIGGVPKGRIVEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTLA H++ AQK+GG AY+D E+ALDPS A +G + +L+I+QPD E+
Sbjct: 66 FGPESSGKTTLATHIVANAQKMGGVAAYIDAEHALDPSYASLIGANIHDLMISQPDCGED 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
LS+ + L +SG++DVIV+DSVAAL+PK E+ I ++ Q+R+M+QALRK+ +L +
Sbjct: 126 ALSIAELLARSGAVDVIVIDSVAALVPKSELEGDIGDVHVGLQARMMSQALRKLTATLAR 185
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
S T IF+NQ+R K G G E T+GG ALKFY+++R+ + R K
Sbjct: 186 SQTCAIFINQIR--EKIGVSFGN-PETTTGGRALKFYSSIRIDIRRIGAIK 233
>gi|413963536|ref|ZP_11402763.1| recombinase A [Burkholderia sp. SJ98]
gi|413929368|gb|EKS68656.1| recombinase A [Burkholderia sp. SJ98]
Length = 356
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/237 (49%), Positives = 160/237 (67%), Gaps = 3/237 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL ALSQ+ FGK S++ L V+STGSL LD+ALG+GGLP+GR+VE
Sbjct: 14 EKSKALAAALSQIEKQFGKGSIMRLGAGEAVEDIQVVSTGSLGLDIALGVGGLPRGRVVE 73
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI E QKLGG A++D E+ALD A +G++ LLI+QPD+ E
Sbjct: 74 IYGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDVQYAGKLGVNVPELLISQPDTGE 133
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SGSID+IV+DSVAAL+PK EI + Q+R+M+QALRK+ ++
Sbjct: 134 QALEIADALVRSGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTIK 193
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+++ L+IF+NQ+R K G G E T+GGNALKFY+++RL + R K D+V
Sbjct: 194 RTNCLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRIGSIKKNDEV 247
>gi|329296671|ref|ZP_08254007.1| recombinase A [Plautia stali symbiont]
Length = 356
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 159/239 (66%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GG+ALKFYA++RL + R K D+V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGHALKFYASVRLDIRRIGAIKEGDEV 238
>gi|429765501|ref|ZP_19297792.1| RecA protein [Clostridium celatum DSM 1785]
gi|429186204|gb|EKY27157.1| RecA protein [Clostridium celatum DSM 1785]
Length = 355
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 165/238 (69%), Gaps = 4/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K A+ A+SQ+ FGK S++ L + ISTG L LD+ALGIGG+P+GRI+
Sbjct: 15 VNKLKAIENAMSQIEKQFGKGSIMKLGEH-STLNIDSISTGCLDLDIALGIGGVPRGRII 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH+ EAQKLGG A++D E+ALDPS A +G+D ENL+++QPD+
Sbjct: 74 EIYGPESSGKTTVALHIAAEAQKLGGAVAFVDAEHALDPSYARNLGVDTENLIVSQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + + L +SG+IDV+VVDSVAAL+P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 134 EQGLEIAEALVRSGAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGTI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S ++IF+NQ+R K G G E T+GG ALKFY+++RL + R K AD++
Sbjct: 194 NKSKCVVIFINQLR--EKVGVMFGN-PETTTGGRALKFYSSIRLDVRRIDSIKQADEI 248
>gi|386747651|ref|YP_006220859.1| recombinase A [Helicobacter cetorum MIT 99-5656]
gi|384553893|gb|AFI05649.1| recombinase A [Helicobacter cetorum MIT 99-5656]
Length = 347
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/238 (48%), Positives = 163/238 (68%), Gaps = 17/238 (7%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGRI 122
K A+ LA+ Q+ FGK +++ L G + + ISTGSL LDLALGIGG+PKGRI
Sbjct: 7 KQKAISLAIKQIDKVFGKGALVRL----GDKQVEKIDAISTGSLGLDLALGIGGIPKGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+E+YG E+SGKTTL+LH+I E QK GG CA++D E+ALD A+ +G+D ENLL++QPD+
Sbjct: 63 IEVYGPESSGKTTLSLHIIAECQKNGGVCAFIDAEHALDVHYAKRLGVDIENLLVSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L +++T+T+SG+ID++VVDSVAAL PK EI + + Q+R+M+ ALRKI
Sbjct: 123 GEQALEILETITRSGAIDLVVVDSVAALTPKAEIDGDMGDQHVGLQARLMSHALRKITGV 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMD----EVTSGGNALKFYAALRLRMMRTRLFK 296
L + +T +IF+NQ+R +G M E T+GGNALKFYA++R+ + R K
Sbjct: 183 LHKMNTTLIFINQIRMK------IGMMGYGSPETTTGGNALKFYASVRIDIRRIAALK 234
>gi|15618671|ref|NP_224957.1| recombinase A [Chlamydophila pneumoniae CWL029]
gi|15836295|ref|NP_300819.1| recombinase A [Chlamydophila pneumoniae J138]
gi|16752279|ref|NP_445647.1| recombinase A [Chlamydophila pneumoniae AR39]
gi|384450068|ref|YP_005662670.1| protein RecA [Chlamydophila pneumoniae LPCoLN]
gi|6225923|sp|Q9Z7E4.1|RECA_CHLPN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|4377070|gb|AAD18900.1| RecA recombination protein [Chlamydophila pneumoniae CWL029]
gi|7190022|gb|AAF38877.1| recA protein [Chlamydophila pneumoniae AR39]
gi|8979135|dbj|BAA98970.1| RecA recombination protein [Chlamydophila pneumoniae J138]
gi|269302551|gb|ACZ32651.1| protein RecA [Chlamydophila pneumoniae LPCoLN]
Length = 353
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 163/238 (68%), Gaps = 3/238 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL A++ + FG S++SL R + I TG+L LDLALGI G+PKGR++EI
Sbjct: 6 RKKALEAAVAYIEKQFGAGSIMSLGRHSATHEISTIKTGALSLDLALGIHGVPKGRVIEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTLA H++ AQK+GG AY+D E+ALDPS A +G++ ++L+I+QPD E+
Sbjct: 66 FGPESSGKTTLATHIVANAQKMGGVAAYIDAEHALDPSYASLIGVNIDDLMISQPDCGED 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
LS+ + L +SG++DVIV+DSVAAL+PK E+ I ++ Q+R+M+QALRK+ +L +
Sbjct: 126 ALSIAELLARSGAVDVIVIDSVAALVPKSELEGDIGDVHVGLQARMMSQALRKLTATLSR 185
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNI 303
S T +F+NQ+R K G G E T+GG ALKFY+++RL + R K +D +I
Sbjct: 186 SQTCAVFINQIR--EKIGVSFGN-PETTTGGRALKFYSSIRLDIRRIGSIKGSDNSDI 240
>gi|302037041|ref|YP_003797363.1| recombinase recA [Candidatus Nitrospira defluvii]
gi|300605105|emb|CBK41438.1| Recombinase RecA [Candidatus Nitrospira defluvii]
Length = 370
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/251 (45%), Positives = 167/251 (66%), Gaps = 10/251 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL LAL+Q+ +GK +++ L P IS+GSL LD+ALG+GG P+GR++E
Sbjct: 6 EKKRALDLALAQIEKQYGKGAVMKLGADDRPADVPAISSGSLGLDIALGVGGFPRGRVIE 65
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
I+G E+SGKTTL LH I EAQK GG A++D E+ALD + A+ +G+ ++LL++QPD+ E
Sbjct: 66 IFGPESSGKTTLTLHAIAEAQKAGGVAAFIDAEHALDLTYAKKLGVQTDDLLVSQPDTGE 125
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + +TL +SG+IDVIVVDSVAAL+P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 126 QALEIAETLVRSGAIDVIVVDSVAALVPRAEIEGEMGDSHMGLQARLMSQALRKLTAAIS 185
Query: 245 QSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNIL 304
+S T +IF+NQ+R K G G E T+GGNALKFY+++RL + R K V
Sbjct: 186 KSQTTLIFINQIRM--KIGVMFGN-PETTTGGNALKFYSSVRLDIRRIESIKDGQDVT-- 240
Query: 305 EVVNIGSMIRL 315
GS +R+
Sbjct: 241 -----GSRVRV 246
>gi|207366362|emb|CAQ58076.1| recombinase A [Agrobacterium tumefaciens]
Length = 308
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/226 (50%), Positives = 153/226 (67%), Gaps = 3/226 (1%)
Query: 76 QLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTT 135
Q+ FGK ++ L +STGSL LD+ALGIGGLPKGRI+EIYG E+SGKTT
Sbjct: 1 QIERSFGKGXIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEIYGPESSGKTT 60
Query: 136 LALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTK 195
LAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD+ E L + DTL +
Sbjct: 61 LALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQALEITDTLVR 120
Query: 196 SGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQ 255
SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S ++IF+NQ
Sbjct: 121 SGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSKCMVIFINQ 180
Query: 256 VRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 IRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKEREEV 223
>gi|345019814|ref|ZP_08783427.1| recombinase A [Ornithinibacillus scapharcae TW25]
Length = 346
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/231 (49%), Positives = 157/231 (67%), Gaps = 4/231 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL +AL Q+ FGK S++ L G + S+GSL LD+ALGIGG PKGRI+EI
Sbjct: 4 RKQALDMALKQIEKQFGKGSIMKLGENAGQKI-ETTSSGSLALDIALGIGGYPKGRIIEI 62
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH I EAQK GG A++D E+ALDP+ A A+G++ + LL++QPD+ E
Sbjct: 63 YGPESSGKTTVALHAIAEAQKQGGQAAFIDAEHALDPTYARALGVNIDELLLSQPDTGEQ 122
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG++DV+VVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 123 ALEIAEALVRSGAVDVLVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGAINK 182
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
S T IF+NQVR K G G E T GG ALKFY+++RL + R K
Sbjct: 183 SKTTAIFINQVR--EKIGVMFGN-PETTPGGRALKFYSSVRLEVRRAETLK 230
>gi|295696220|ref|YP_003589458.1| recA protein [Kyrpidia tusciae DSM 2912]
gi|295411822|gb|ADG06314.1| recA protein [Kyrpidia tusciae DSM 2912]
Length = 351
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/228 (47%), Positives = 157/228 (68%), Gaps = 3/228 (1%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL +AL Q+ FGK S++ L S V+STG+L LD+ALG+GG P+GR++EIYG
Sbjct: 7 ALDMALRQIEKQFGKGSIMKLGEAQASMNVEVVSTGALALDIALGVGGFPRGRVIEIYGP 66
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTT+ALH I E QKLGG A++D E+ALDP A +G++ + LLI+QPD+ E L
Sbjct: 67 ESSGKTTVALHAIAEVQKLGGQAAFIDAEHALDPVYARNLGVNIDELLISQPDTGEQALE 126
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ + L +SG++D+IV+DSVAAL+PK E+ + + Q+R+M+QALRK+ ++ +S T
Sbjct: 127 IAEALVRSGAVDIIVIDSVAALVPKAELEGDMGDSHVGLQARLMSQALRKLSGAISKSRT 186
Query: 249 LIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+ IF+NQ+R K G G E T+GG ALKFY+++RL + R K
Sbjct: 187 IAIFINQIR--EKVGVMFGN-PETTTGGRALKFYSSVRLEVRRAEALK 231
>gi|432373272|ref|ZP_19616310.1| protein recA [Escherichia coli KTE11]
gi|430895278|gb|ELC17549.1| protein recA [Escherichia coli KTE11]
Length = 353
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K + V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGENV 238
>gi|346992739|ref|ZP_08860811.1| recombinase A [Ruegeria sp. TW15]
Length = 354
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/243 (49%), Positives = 163/243 (67%), Gaps = 6/243 (2%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLP 118
D K K AL AL+Q+ FGK S++ L S++ STGSL LD+ALGIGGLP
Sbjct: 9 DKKNADKQKALDSALAQIERQFGKGSIMKLGE--DSKQDIEASSTGSLGLDIALGIGGLP 66
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
GRIVEIYG E+SGKTTL LH I E QK GG CA++D E+ALDP A +G+D + LLI+
Sbjct: 67 MGRIVEIYGPESSGKTTLTLHCIAEQQKRGGVCAFVDAEHALDPQYARKLGVDLDELLIS 126
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+++++VVDSVAAL PK E+ + Q+R+M+QA+RK
Sbjct: 127 QPDTGEQALEITDTLVRSGAVNMVVVDSVAALTPKSELEGDMGDSSVGVQARLMSQAMRK 186
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFY+++RL + R K
Sbjct: 187 LTGSINRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYSSVRLDIRRIGAIKDR 243
Query: 299 DKV 301
D+V
Sbjct: 244 DEV 246
>gi|66270756|gb|AAY43691.1| RecA/GFP fusion protein [Cloning vector pSJS1472]
Length = 593
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A +G+D ENLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIENLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
L QS+TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K + V
Sbjct: 183 LKQSNTLLIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAVKEGENV 238
>gi|408907944|emb|CCM10955.1| RecA protein [Helicobacter heilmannii ASB1.4]
Length = 352
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 161/233 (69%), Gaps = 5/233 (2%)
Query: 65 QKDNALRLALSQLANDFGKESMLSL-KRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
QK A+ A+ Q+ FGK +++ L R G ISTGSL LD+ALGIGG+PKGRIV
Sbjct: 4 QKQKAIESAIKQIDKAFGKGALMRLGDREVEHIEG--ISTGSLGLDVALGIGGVPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LH++ + QK GG CA++D E+ALD A+ +G+D +NLLI+QPD+
Sbjct: 62 EIYGPESSGKTTLTLHIVAQTQKNGGACAFIDAEHALDVQYAKKLGVDTDNLLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L +++TL ++G++DVIVVDSVAAL P+ EI + + Q+R+M+QALRKI L
Sbjct: 122 EEALEILETLARTGAVDVIVVDSVAALTPRAEIEGDMGDQHVGLQARLMSQALRKITGIL 181
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
+ +T +IF+NQ+R + G G E T+GGNALKFYA++R+ + R K
Sbjct: 182 HKMNTTLIFINQIRMKIGT-MGYGS-PETTTGGNALKFYASVRIDIRRIATLK 232
>gi|386749291|ref|YP_006222498.1| recombinase A [Helicobacter cetorum MIT 00-7128]
gi|384555534|gb|AFI03868.1| recombinase A [Helicobacter cetorum MIT 00-7128]
Length = 347
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/238 (48%), Positives = 163/238 (68%), Gaps = 17/238 (7%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGRI 122
K A+ LA+ Q+ FGK +++ L G + + ISTGSL LDLALGIGG+PKGRI
Sbjct: 7 KQKAISLAIKQIDKVFGKGALVRL----GDKQVEKIDAISTGSLGLDLALGIGGIPKGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+E+YG E+SGKTTL+LH+I E QK GG CA++D E+ALD A+ +G+D ENLL++QPD+
Sbjct: 63 IEVYGPESSGKTTLSLHIIAECQKNGGVCAFIDAEHALDVHYAKRLGVDIENLLVSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L +++T+T+SG+ID++VVDSVAAL PK EI + + Q+R+M+ ALRKI
Sbjct: 123 GEQALEILETITRSGAIDLVVVDSVAALTPKAEIDGDMGDQHVGLQARLMSHALRKITGV 182
Query: 243 LCQSHTLIIFLNQVRFSAKSGQGLGRMD----EVTSGGNALKFYAALRLRMMRTRLFK 296
L + +T +IF+NQ+R +G M E T+GGNALKFYA++R+ + R K
Sbjct: 183 LHKMNTTLIFINQIRMK------IGMMGYGSPETTTGGNALKFYASVRIDIRRIAALK 234
>gi|424825608|ref|ZP_18250595.1| recombinase A [Chlamydophila abortus LLG]
gi|333410707|gb|EGK69694.1| recombinase A [Chlamydophila abortus LLG]
Length = 349
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 158/231 (68%), Gaps = 3/231 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL A++ + FG S++SL + S I TG+L LDLALGIGG+PKGRIVEI
Sbjct: 6 RKKALEAAIAYIEKQFGSGSIMSLGKHSASHEISTIKTGALSLDLALGIGGVPKGRIVEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTLA H++ AQK+GG AY+D E+ALDPS A +G + +L+I+QPD E+
Sbjct: 66 FGPESSGKTTLATHIVANAQKMGGVAAYIDAEHALDPSYASLIGANINDLMISQPDCGED 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
LS+ + L +SG++DVIV+DSVAAL+PK E+ I ++ Q+R+M+QALRK+ +L +
Sbjct: 126 ALSIAELLARSGAVDVIVIDSVAALVPKSELEGDIGDVHVGLQARMMSQALRKLTATLAR 185
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFK 296
S T IF+NQ+R K G G E T+GG ALKFY+++R+ + R K
Sbjct: 186 SQTCAIFINQIR--EKIGVSFGN-PETTTGGRALKFYSSIRIDIRRIGAIK 233
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,401,440,343
Number of Sequences: 23463169
Number of extensions: 173665585
Number of successful extensions: 606130
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9044
Number of HSP's successfully gapped in prelim test: 2324
Number of HSP's that attempted gapping in prelim test: 588660
Number of HSP's gapped (non-prelim): 11687
length of query: 315
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 173
effective length of database: 9,027,425,369
effective search space: 1561744588837
effective search space used: 1561744588837
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)