BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021239
(315 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RY99|RECAM_ARATH DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis
thaliana GN=At3g10140 PE=2 SV=1
Length = 389
Score = 347 bits (891), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 186/300 (62%), Positives = 226/300 (75%), Gaps = 2/300 (0%)
Query: 9 RFSSIAPRRFFSLFPSFSQ-NGRRDAITCIGMNIHSLSSAAEVPEFD-DEPHDDAKIMQK 66
R S +P + F F SQ NGRR + C G LSS E + + DE DD K+ +K
Sbjct: 3 RLSWASPIQRFRFFSYLSQLNGRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEK 62
Query: 67 DNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIY 126
D AL LALSQL+ DF K+S LSL+RF+ RR VISTGSL LDLALG+GGLPKGR+VE+Y
Sbjct: 63 DTALHLALSQLSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVY 122
Query: 127 GREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENL 186
G+EASGKTTLALH+IKEAQKLGGYCAYLD ENA+DPSLAE++G++ E LLI++P SAE +
Sbjct: 123 GKEASGKTTLALHIIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKM 182
Query: 187 LSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQS 246
L++VD LTKSGS+DVIVVDSVAAL P+CE+ P+ Y D QSRIMTQALRKIHYS+ S
Sbjct: 183 LNIVDVLTKSGSVDVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYS 242
Query: 247 HTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVNILEV 306
TLI+FLNQVR KS +EVT GGNAL F+AA+RL+M+RT L K A+K++ L V
Sbjct: 243 QTLIVFLNQVRSHVKSNMHFPHAEEVTCGGNALPFHAAIRLKMIRTGLIKTANKISGLNV 302
>sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis
thaliana GN=At2g19490 PE=2 SV=2
Length = 430
Score = 243 bits (621), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 136/249 (54%), Positives = 177/249 (71%)
Query: 54 DDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALG 113
D + + +K+ AL+ AL Q+ + FGK S++ L R R PV STGS LD+ALG
Sbjct: 46 DGNGSSEEGMSKKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALG 105
Query: 114 IGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAE 173
+GGLPKGR+VEIYG EASGKTTLALHVI EAQK GG C ++D E+ALD SLA+A+G++ E
Sbjct: 106 VGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTE 165
Query: 174 NLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMT 233
NLL++QPD E LS+VDTL +SGS+DVIVVDSVAAL+PK E+ + + Q+R+M+
Sbjct: 166 NLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMS 225
Query: 234 QALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTR 293
QALRK+ +SL S TL+IF+NQVR + G G EVT GGNALKFYA++RL + R
Sbjct: 226 QALRKLSHSLSLSQTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIG 285
Query: 294 LFKIADKVN 302
L K ++
Sbjct: 286 LIKKGEETT 294
>sp|A5FXB8|RECA_ACICJ Protein RecA OS=Acidiphilium cryptum (strain JF-5) GN=recA PE=3
SV=1
Length = 343
Score = 240 bits (612), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 169/239 (70%), Gaps = 3/239 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M+K+ AL AL+Q+ FGK S++ + S VISTGSL LDLALGIGGLP+GR++
Sbjct: 1 MEKNKALDAALAQIERAFGKGSIMRMGSRSESEAIDVISTGSLGLDLALGIGGLPRGRVI 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAVAEAQKRGGTCAFVDAEHALDPIYARKLGVDVDNLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 121 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+S TL+IFLNQ+R K G G E T+GGNALKFYA++R+ + R K ++V
Sbjct: 181 SRSKTLVIFLNQIRL--KIGVMFGN-PETTTGGNALKFYASIRMDIRRIGSIKDREEVT 236
>sp|Q89I84|RECA_BRAJA Protein RecA OS=Bradyrhizobium japonicum (strain USDA 110) GN=recA
PE=3 SV=1
Length = 362
Score = 239 bits (611), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 14 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+SHT++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 NKSHTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 248
>sp|Q3ST50|RECA_NITWN Protein RecA OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC
25391) GN=recA PE=3 SV=1
Length = 362
Score = 237 bits (605), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 168/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S VIS+GSL LD+ALG+GGLPKGRIV
Sbjct: 14 MDKSKALSAALSQIERQFGKGSVMKLGKNDKSMDVEVISSGSLGLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD
Sbjct: 74 EVYGPESSGKTTLALHAVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+++DSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 248
>sp|B9JFS7|RECA_AGRRK Protein RecA OS=Agrobacterium radiobacter (strain K84 / ATCC
BAA-868) GN=recA PE=3 SV=1
Length = 361
Score = 237 bits (604), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/240 (52%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 248
>sp|B0CH00|RECA_BRUSI Protein RecA OS=Brucella suis (strain ATCC 23445 / NCTC 10510)
GN=recA PE=3 SV=1
Length = 361
Score = 236 bits (603), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 248
>sp|P65976|RECA_BRUSU Protein RecA OS=Brucella suis biovar 1 (strain 1330) GN=recA PE=3
SV=1
Length = 361
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 248
>sp|P65975|RECA_BRUME Protein RecA OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=recA PE=3 SV=1
Length = 361
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 248
>sp|C0RJG9|RECA_BRUMB Protein RecA OS=Brucella melitensis biotype 2 (strain ATCC 23457)
GN=recA PE=3 SV=1
Length = 361
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 248
>sp|A9M5L8|RECA_BRUC2 Protein RecA OS=Brucella canis (strain ATCC 23365 / NCTC 10854)
GN=recA PE=3 SV=1
Length = 361
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 248
>sp|Q04761|RECA_BRUAB Protein RecA OS=Brucella abortus biovar 1 (strain 9-941) GN=recA
PE=3 SV=2
Length = 361
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 248
>sp|Q2YRU7|RECA_BRUA2 Protein RecA OS=Brucella abortus (strain 2308) GN=recA PE=3 SV=1
Length = 361
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 248
>sp|B2S648|RECA_BRUA1 Protein RecA OS=Brucella abortus (strain S19) GN=recA PE=3 SV=1
Length = 361
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 SRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKERDEV 248
>sp|B6IS93|RECA_RHOCS Protein RecA OS=Rhodospirillum centenum (strain ATCC 51521 / SW)
GN=recA PE=3 SV=1
Length = 358
Score = 236 bits (602), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 162/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL Q+ FGK S++ L ISTGSL LD+ALGIGGLP+GRIV
Sbjct: 13 MDKQKALDAALGQIERAFGKGSIMKLGAREAMAETEAISTGSLGLDIALGIGGLPRGRIV 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP+ A +G+D + LLI+QPD+
Sbjct: 73 EIYGPESSGKTTLALHAIAEAQKAGGTCAFVDAEHALDPAYARKLGVDVDELLISQPDAG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 133 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSI 192
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S L+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 193 SKSRCLVIFINQIRL--KIGVMFGN-PETTTGGNALKFYASIRLDIRRIGAIKDRDNV 247
>sp|A6X0E8|RECA_OCHA4 Protein RecA OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882
/ NCTC 12168) GN=recA PE=3 SV=1
Length = 361
Score = 236 bits (602), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/243 (53%), Positives = 166/243 (68%), Gaps = 13/243 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLALGIGGLP 118
+ K AL ALSQ+ FGK S++ L + PVI TGSL LD+ALG+GGLP
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIALGVGGLP 68
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+
Sbjct: 69 KGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLIS 128
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK
Sbjct: 129 QPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRK 188
Query: 239 IHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIA 298
+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 189 LTASISRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKER 245
Query: 299 DKV 301
D+V
Sbjct: 246 DEV 248
>sp|C1D4J2|RECA_LARHH Protein RecA OS=Laribacter hongkongensis (strain HLHK9) GN=recA
PE=3 SV=1
Length = 354
Score = 236 bits (602), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/236 (51%), Positives = 165/236 (69%), Gaps = 3/236 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ + + VISTGSL LD+ALG+GGLP+GR+VEI
Sbjct: 6 KQKALSAALSQIEKQFGKGSIMRMNETQVNDNLQVISTGSLGLDMALGVGGLPRGRVVEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L V+ EAQKLGG CAY+D ENALDP A +G+ ++LL++QPD+ E
Sbjct: 66 YGPESSGKTTLCLQVVAEAQKLGGTCAYIDAENALDPVYAGKLGVKVDDLLVSQPDTGEQ 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG +DVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 126 ALEICDMLVRSGGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKR 185
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
++TL+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D++
Sbjct: 186 TNTLVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGAIKKTDEI 238
>sp|P62209|RECA_AZOL4 Protein RecA OS=Azospirillum lipoferum (strain 4B) GN=recA PE=1
SV=2
Length = 359
Score = 236 bits (602), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L VISTGSL LD+ALGIGGLPKGRIV
Sbjct: 14 MDKQKALDAALSQIERAFGKGSIMKLGARENLVETEVISTGSLGLDIALGIGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I +AQK GG CA++D E+ALDPS A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHAIAQAQKAGGTCAFVDAEHALDPSYARKLGVNIDELLISQPDAG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ L+IF+NQ+R K G G E T+GGNALKFYA++RL + R K D V
Sbjct: 194 SKSNCLVIFINQIRL--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGSIKDRDTV 248
>sp|Q1QMW2|RECA_NITHX Protein RecA OS=Nitrobacter hamburgensis (strain X14 / DSM 10229)
GN=recA PE=3 SV=1
Length = 362
Score = 236 bits (601), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S VIS+GSL LD+ALG+GGLPKGR+V
Sbjct: 14 MDKSKALSAALSQIERQFGKGSVMKLGKNDKSMDIEVISSGSLGLDIALGVGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+ ++LLI+QPD
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPIYARKLGVKVDDLLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+++DSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 194 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 248
>sp|Q9XBC1|RECA_RHOPA Protein RecA OS=Rhodopseudomonas palustris (strain ATCC BAA-98 /
CGA009) GN=recA PE=3 SV=3
Length = 349
Score = 235 bits (599), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S IS+GSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKSKALSAALSQIERQFGKGSVMRLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD
Sbjct: 61 EIYGPESSGKTTLALHCVAEAQKKGGICAFVDAEHALDPVYARKLGVNVDDLLISQPDHG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 181 NKSNTMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGQIKERDEV 235
>sp|P24074|RECA_RHILV Protein RecA OS=Rhizobium leguminosarum bv. viciae GN=recA PE=3
SV=1
Length = 351
Score = 235 bits (599), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 163/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GRI+
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG +DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGRVDVLVVDSVAALTPRAEIEGEMGDTVPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 235
>sp|Q2W9P9|RECA_MAGSA Protein RecA OS=Magnetospirillum magneticum (strain AMB-1 / ATCC
700264) GN=recA PE=3 SV=1
Length = 359
Score = 234 bits (598), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 120/242 (49%), Positives = 168/242 (69%), Gaps = 3/242 (1%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
D M + AL A+SQ+ FGK S++ L V+STGSL LD+ALGIGG+P+
Sbjct: 10 DKDTMDRQKALEAAVSQIERAFGKGSIMKLGGKDQVVETEVVSTGSLGLDVALGIGGVPR 69
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+E+YG E+SGKTTLALH+I EAQK GG CA++D E+ALDPS A +G++ + LLI+Q
Sbjct: 70 GRIIEVYGPESSGKTTLALHIIAEAQKKGGTCAFVDAEHALDPSYARKLGVNLDELLISQ 129
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 130 PDAGEQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDNHMGLHARLMSQALRKL 189
Query: 240 HYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIAD 299
S+ +S T++IF+NQ+R K G G E T+GGNALKFYA++R+ + R K D
Sbjct: 190 TGSVSKSKTIVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRMEIRRVGAIKDRD 246
Query: 300 KV 301
+V
Sbjct: 247 EV 248
>sp|Q2RQH9|RECA_RHORT Protein RecA OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB
8255) GN=recA PE=3 SV=1
Length = 366
Score = 234 bits (597), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 126/247 (51%), Positives = 170/247 (68%), Gaps = 13/247 (5%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV-----ISTGSLKLDLALGI 114
D M K AL A+ Q+ FGK S++ L +RG V ISTGSL LD+ALGI
Sbjct: 10 DKDTMDKQKALEAAVGQIERAFGKGSIMKL-----GQRGSVVDIESISTGSLGLDIALGI 64
Query: 115 GGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAEN 174
GGLP+GRIVEIYG E+SGKTTLALHV+ EAQK GG CA++D E+A DP A +G+ ++
Sbjct: 65 GGLPRGRIVEIYGPESSGKTTLALHVVAEAQKKGGQCAFVDAEHAFDPLYARKLGVSLDD 124
Query: 175 LLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQ 234
LL++QPD+ E L + DTL +SG+IDV+V+DSVAAL+PK E+ + + Q+R+M+Q
Sbjct: 125 LLVSQPDTGEQALEIADTLVRSGAIDVLVIDSVAALVPKAELEGDMGDSHVGLQARLMSQ 184
Query: 235 ALRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRL 294
ALRK+ ++ +S+TLIIF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 185 ALRKLTGTVSRSNTLIIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRIGA 241
Query: 295 FKIADKV 301
K ++V
Sbjct: 242 VKDKEEV 248
>sp|Q1MFZ8|RECA_RHIL3 Protein RecA OS=Rhizobium leguminosarum bv. viciae (strain 3841)
GN=recA PE=3 SV=1
Length = 364
Score = 234 bits (597), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 248
>sp|Q98NQ6|RECA_RHILO Protein RecA OS=Rhizobium loti (strain MAFF303099) GN=recA PE=3
SV=1
Length = 365
Score = 234 bits (597), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 125/240 (52%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GR
Sbjct: 12 KAVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 192 SISRSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKDRDEV 248
>sp|B5ZRG2|RECA_RHILW Protein RecA OS=Rhizobium leguminosarum bv. trifolii (strain
WSM2304) GN=recA PE=3 SV=1
Length = 362
Score = 234 bits (597), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 248
>sp|A1USS3|RECA_BARBK Protein RecA OS=Bartonella bacilliformis (strain ATCC 35685 /
KC583) GN=recA PE=3 SV=1
Length = 347
Score = 234 bits (596), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 121/228 (53%), Positives = 162/228 (71%), Gaps = 3/228 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + G ISTGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKKKALDAALSQIERSFGKGSIMRLGQKEGVVEIETISTGSLSLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL ++QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFVDAEHALDPIYARKLGVDLENLFVSQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI ++ Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMSDSLPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 225
>sp|B3PPU4|RECA_RHIE6 Protein RecA OS=Rhizobium etli (strain CIAT 652) GN=recA PE=3 SV=1
Length = 362
Score = 234 bits (596), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 122/230 (53%), Positives = 161/230 (70%), Gaps = 3/230 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 238
>sp|P24543|RECA_RHIET Protein RecA OS=Rhizobium etli GN=recA PE=3 SV=2
Length = 361
Score = 233 bits (595), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 122/230 (53%), Positives = 161/230 (70%), Gaps = 3/230 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
S+ +S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 192 SISKSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 238
>sp|C3MD93|RECA_RHISN Protein RecA OS=Rhizobium sp. (strain NGR234) GN=recA PE=3 SV=1
Length = 361
Score = 233 bits (595), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/244 (52%), Positives = 168/244 (68%), Gaps = 11/244 (4%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGL 117
K + K AL ALSQ+ FGK S++ L GS+ + +STGSL LD+ALGIGGL
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKL----GSKDSVIEIETVSTGSLGLDIALGIGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGRI+EIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI
Sbjct: 68 PKGRIIEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKI 297
K+ S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K
Sbjct: 188 KLTASISKSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKE 244
Query: 298 ADKV 301
++V
Sbjct: 245 REEV 248
>sp|P27865|RECA_RHIME Protein RecA OS=Rhizobium meliloti (strain 1021) GN=recA PE=3 SV=1
Length = 348
Score = 233 bits (595), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 163/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+ID++V+DSVAAL+P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAIDILVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 181 SKSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKEREEV 235
>sp|A6U9N5|RECA_SINMW Protein RecA OS=Sinorhizobium medicae (strain WSM419) GN=recA PE=3
SV=1
Length = 361
Score = 233 bits (594), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/240 (52%), Positives = 164/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERAFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPIYARKLGVDLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKEREEV 248
>sp|Q11IW6|RECA_MESSB Protein RecA OS=Mesorhizobium sp. (strain BNC1) GN=recA PE=3 SV=1
Length = 360
Score = 233 bits (594), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/228 (53%), Positives = 160/228 (70%), Gaps = 3/228 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GRI+
Sbjct: 14 VDKSKALDAALSQIERAFGKGSIMRLGANDKVVEIETISTGSLGLDIALGVGGLPRGRII 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DVIVVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVIVVDSVAALTPRAEIEGEMGESLPGMQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
+S+T++IF+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 194 SRSNTMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 238
>sp|B9JX56|RECA_AGRVS Protein RecA OS=Agrobacterium vitis (strain S4 / ATCC BAA-846)
GN=recA PE=3 SV=1
Length = 362
Score = 233 bits (593), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/230 (53%), Positives = 160/230 (69%), Gaps = 3/230 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KTVDKSKALEAALSQIERSFGKGSIMKLGANEKIVEVETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGVCAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+V+DSVAAL PK EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDVLVIDSVAALTPKAEIEGEMGDSLPGMQARLMSQALRKLTG 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMR 291
S+ +S+ +++F+NQ+R K G G E T+GGNALKFYA++RL + R
Sbjct: 192 SISRSNCMVVFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRR 238
>sp|A3PLJ2|RECA_RHOS1 Protein RecA OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH
2.4.9) GN=recA PE=3 SV=1
Length = 357
Score = 233 bits (593), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL+Q+ FGK S++ L STGSL LD+ALGIGGLPKGRI+
Sbjct: 15 MDKAKALESALAQIERQFGKGSIMKLGANSPVMEIEATSTGSLGLDIALGIGGLPKGRII 74
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LHV+ E QK GG CA++D E+ALDP A+ +G++ + LLI+QPD+
Sbjct: 75 EIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLISQPDTG 134
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L +VDTL +SG++++IVVDSVAAL PK EI + M +Q+R+M+QA+RK+ S+
Sbjct: 135 EQALEIVDTLVRSGAVNLIVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAMRKLTASI 194
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D V
Sbjct: 195 GRSNCMVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDRDNV 249
>sp|Q08327|RECA_ACEPO Protein RecA OS=Acetobacter polyoxogenes GN=recA PE=3 SV=1
Length = 348
Score = 232 bits (592), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 169/239 (70%), Gaps = 4/239 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ + + + VISTGSL LD+ALGIGGLP+GRI+
Sbjct: 7 IDKSKALEGALSQIERAFGKGSIMRMGERP-TEQVDVISTGSLGLDIALGIGGLPRGRII 65
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH I EAQ+ GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 66 EIYGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAG 125
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 126 EQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSV 185
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKVN 302
+S+T++IFLNQ+R K G G E T+GGNALKFYA++R+ + R K D+V
Sbjct: 186 SRSNTMLIFLNQIRL--KIGVMFGS-PESTTGGNALKFYASVRMDIRRIGSIKDKDEVT 241
>sp|P32725|RECA_RHOS4 Protein RecA OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1
/ NCIB 8253 / DSM 158) GN=recA PE=3 SV=1
Length = 343
Score = 232 bits (592), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL+Q+ FGK S++ L STGSL LD+ALGIGGLPKGRI+
Sbjct: 1 MDKAKALESALAQIERQFGKGSIMKLGANSPVMEIEATSTGSLGLDIALGIGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LHV+ E QK GG CA++D E+ALDP A+ +G++ + LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L +VDTL +SG++++IVVDSVAAL PK EI + M +Q+R+M+QA+RK+ S+
Sbjct: 121 EQALEIVDTLVRSGAVNLIVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAMRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D V
Sbjct: 181 GRSNCMVIFINQIRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGAIKDRDNV 235
>sp|Q9ZIQ0|RECA_RHOVI Protein RecA OS=Rhodopseudomonas viridis GN=recA PE=3 SV=1
Length = 348
Score = 232 bits (591), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL+Q+ FGK S++ L + + ISTGSL LD+ALGIGGLP+GR+V
Sbjct: 1 MDKTKALDAALTQIERAFGKGSIMRLGKSGAALEVETISTGSLGLDIALGIGGLPRGRVV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+
Sbjct: 61 EIFGPESSGKTTLALHTVAEAQKKGGVCAFIDAEHALDPLYARKLGVNLDDLLISQPDAG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSQPGMQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+V
Sbjct: 181 SRSNCMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRIGAIKERDEV 235
>sp|Q2K7T3|RECA_RHIEC Protein RecA OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=recA
PE=3 SV=1
Length = 362
Score = 232 bits (591), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 164/240 (68%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSVKEREEV 248
>sp|Q9A9A7|RECA_CAUCR Protein RecA OS=Caulobacter crescentus (strain ATCC 19089 / CB15)
GN=recA PE=3 SV=1
Length = 356
Score = 231 bits (590), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 122/243 (50%), Positives = 168/243 (69%), Gaps = 18/243 (7%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPKGR 121
K AL AL+Q+ FGK S++ L +G V +STGSL LD+ALGIGGLPKGR
Sbjct: 17 KQRALEAALAQIDRAFGKGSVMKL-----GEKGKVEIESVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVE+YG E+SGKTTLALHV+ E QK GG A++D E+ALDPS A +G++ +NLL++QPD
Sbjct: 72 IVEVYGPESSGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAYKLGVNLDNLLVSQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++VVDSVAAL PK EI + Q+R+M+QALRK+
Sbjct: 132 NGEQALEITDTLVRSGAVDIVVVDSVAALTPKAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRM---DEVTSGGNALKFYAALRLRMMRTRLFKIA 298
S+ +++T++IF+NQ+R +G M E T+GGNALKFYA++RL + RT K
Sbjct: 192 SINKANTIVIFINQIRHK------IGVMYGSPETTTGGNALKFYASVRLDIRRTGSVKAR 245
Query: 299 DKV 301
D++
Sbjct: 246 DEI 248
>sp|B8H3I7|RECA_CAUCN Protein RecA OS=Caulobacter crescentus (strain NA1000 / CB15N)
GN=recA PE=3 SV=1
Length = 356
Score = 231 bits (590), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 122/243 (50%), Positives = 168/243 (69%), Gaps = 18/243 (7%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPKGR 121
K AL AL+Q+ FGK S++ L +G V +STGSL LD+ALGIGGLPKGR
Sbjct: 17 KQRALEAALAQIDRAFGKGSVMKL-----GEKGKVEIESVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVE+YG E+SGKTTLALHV+ E QK GG A++D E+ALDPS A +G++ +NLL++QPD
Sbjct: 72 IVEVYGPESSGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAYKLGVNLDNLLVSQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++VVDSVAAL PK EI + Q+R+M+QALRK+
Sbjct: 132 NGEQALEITDTLVRSGAVDIVVVDSVAALTPKAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRM---DEVTSGGNALKFYAALRLRMMRTRLFKIA 298
S+ +++T++IF+NQ+R +G M E T+GGNALKFYA++RL + RT K
Sbjct: 192 SINKANTIVIFINQIRHK------IGVMYGSPETTTGGNALKFYASVRLDIRRTGSVKAR 245
Query: 299 DKV 301
D++
Sbjct: 246 DEI 248
>sp|A4WV48|RECA_RHOS5 Protein RecA OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH
2.4.3) GN=recA PE=3 SV=1
Length = 357
Score = 231 bits (589), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL+Q+ FGK S++ L STGSL LD+ALGIGGLPKGRI+
Sbjct: 15 MDKAKALESALAQIERQFGKGSIMKLGANSPVMEIEATSTGSLGLDIALGIGGLPKGRII 74
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LHV+ E QK GG CA++D E+ALDP+ A+ +G++ + LLI+QPD+
Sbjct: 75 EIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPAYAKKLGVNLDELLISQPDTG 134
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L +VDTL +SG++ +IVVDSVAAL PK EI + M +Q+R+M+QA+RK+ S+
Sbjct: 135 EQALEIVDTLVRSGAVSLIVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAMRKLTASI 194
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + RT K D V
Sbjct: 195 GRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRTGGIKDRDNV 249
>sp|P42447|RECA_RHOCA Protein RecA OS=Rhodobacter capsulatus GN=recA PE=3 SV=1
Length = 355
Score = 231 bits (589), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 128/246 (52%), Positives = 167/246 (67%), Gaps = 9/246 (3%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI---STGSLKLDLALGIG 115
+D K AL AL+Q+ FGK S++ L G P I STGSL LD+ALGIG
Sbjct: 10 NDKGKADKQKALECALAQIERQFGKGSIMKLG---GDTPPPEIEATSTGSLGLDIALGIG 66
Query: 116 GLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENL 175
GLPKGRIVEIYG E+SGKTTL LH I E QK GG CA++D E+ALDP A+ +G+ E+L
Sbjct: 67 GLPKGRIVEIYGPESSGKTTLTLHCIAEEQKKGGVCAFVDAEHALDPYYAKKLGVSLEDL 126
Query: 176 LIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQA 235
LI+QPD+ E L +VDTL +SG++ ++VVDSVAAL PK EI + AQ+R+M+QA
Sbjct: 127 LISQPDTGEQALEIVDTLVRSGAVSLVVVDSVAALTPKAEIEGDMGDATVGAQARLMSQA 186
Query: 236 LRKIHYSLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLF 295
+RK+ S+ +S+ ++IF+NQ+R K G G E TSGGNALKFYA++RL + RT
Sbjct: 187 MRKLTASIGRSNCMVIFINQIRM--KIGVMFGS-PETTSGGNALKFYASVRLDIRRTGAI 243
Query: 296 KIADKV 301
K D+V
Sbjct: 244 KDRDEV 249
>sp|Q6FZF0|RECA_BARQU Protein RecA OS=Bartonella quintana (strain Toulouse) GN=recA PE=3
SV=1
Length = 347
Score = 230 bits (587), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 162/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRVGSIKDRDMI 235
>sp|Q7NXL9|RECA_CHRVO Protein RecA OS=Chromobacterium violaceum (strain ATCC 12472 / DSM
30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)
GN=recA PE=3 SV=1
Length = 350
Score = 230 bits (587), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/226 (52%), Positives = 160/226 (70%), Gaps = 3/226 (1%)
Query: 76 QLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTT 135
Q+ FGK S++ + + VISTGSL LDLALG+GGLP+GR+VEIYG E+SGKTT
Sbjct: 16 QIEKQFGKGSIMRMSDNQITENLQVISTGSLTLDLALGVGGLPRGRVVEIYGPESSGKTT 75
Query: 136 LALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTK 195
L L + EAQKLGG CAY+D ENALDP A+ +G++ E+LLI+QPD+ E L + D L +
Sbjct: 76 LCLQAVAEAQKLGGTCAYIDAENALDPVYAQKLGVNVEDLLISQPDTGEQALEICDMLVR 135
Query: 196 SGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQ 255
S +DVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ +++TL+IF+NQ
Sbjct: 136 SSGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRTNTLVIFINQ 195
Query: 256 VRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+R K G G E T+GGNALKFYA++RL + RT K D+V
Sbjct: 196 IRM--KIGVMFGN-PETTTGGNALKFYASVRLDIRRTGGIKKGDEV 238
>sp|P33156|RECA_AGRT5 Protein RecA OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
GN=recA PE=3 SV=1
Length = 363
Score = 230 bits (586), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/240 (50%), Positives = 163/240 (67%), Gaps = 3/240 (1%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
S+ +S ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K ++V
Sbjct: 192 SISKSKCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGAVKEREEV 248
>sp|A9IVY9|RECA_BART1 Protein RecA OS=Bartonella tribocorum (strain CIP 105476 / IBS 506)
GN=recA PE=3 SV=1
Length = 347
Score = 230 bits (586), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 162/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + + TGSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETVPTGSLSLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKGGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKDRDMI 235
>sp|B1LWT6|RECA_METRJ Protein RecA OS=Methylobacterium radiotolerans (strain ATCC 27329 /
DSM 1819 / JCM 2831) GN=recA PE=3 SV=1
Length = 363
Score = 229 bits (584), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 164/235 (69%), Gaps = 3/235 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ ALSQ+ FGK S++ L + + +STGSL LD+ALG+GGLP+GR++EI
Sbjct: 18 KSKAIDAALSQIERAFGKGSIMRLGKSDKVQEVETVSTGSLGLDIALGVGGLPRGRVIEI 77
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+ E
Sbjct: 78 YGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQ 137
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 138 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGESQPGLQARLMSQALRKLTGSISR 197
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+
Sbjct: 198 SNCMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRISTLKDRDE 249
>sp|Q6G2Z3|RECA_BARHE Protein RecA OS=Bartonella henselae (strain ATCC 49882 / Houston 1)
GN=recA PE=3 SV=1
Length = 347
Score = 229 bits (584), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 162/238 (68%), Gaps = 3/238 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKIKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADKV 301
+S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D +
Sbjct: 181 FRSNCMVIFINQIRM--KIGVMFGS-PETTTGGNALKFYASVRLDIRRIGSIKDRDMI 235
>sp|B8IP29|RECA_METNO Protein RecA OS=Methylobacterium nodulans (strain ORS2060 / LMG
21967) GN=recA PE=3 SV=1
Length = 363
Score = 229 bits (583), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 164/235 (69%), Gaps = 3/235 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ AL+Q+ FGK S++ L + + ISTGSL LD+ALG+GGLP+GR++EI
Sbjct: 18 KSKAIDAALAQIERAFGKGSIMRLGKGDKVQEVETISTGSLGLDIALGVGGLPRGRVIEI 77
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+ E
Sbjct: 78 YGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQ 137
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 138 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDQQPGLQARLMSQALRKLTGSISR 197
Query: 246 SHTLIIFLNQVRFSAKSGQGLGRMDEVTSGGNALKFYAALRLRMMRTRLFKIADK 300
S+ ++IF+NQ+R K G G E T+GGNALKFYA++RL + R K D+
Sbjct: 198 SNCMVIFINQIRM--KIGVMYGS-PETTTGGNALKFYASVRLDIRRVSTLKDRDE 249
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,643,850
Number of Sequences: 539616
Number of extensions: 4219725
Number of successful extensions: 16325
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 167
Number of HSP's that attempted gapping in prelim test: 14753
Number of HSP's gapped (non-prelim): 872
length of query: 315
length of database: 191,569,459
effective HSP length: 117
effective length of query: 198
effective length of database: 128,434,387
effective search space: 25430008626
effective search space used: 25430008626
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)