Your job contains 1 sequence.
>021247
MKFAGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHC
LGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVA
GGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG
TISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS
GHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRV
VSVSDDKSISLYEYS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021247
(315 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2123929 - symbol:VIP3 "AT4G29830" species:3702... 1325 2.9e-135 1
UNIPROTKB|Q6PBD6 - symbol:wdr61 "WD repeat-containing pro... 631 1.0e-61 1
UNIPROTKB|Q6GMD2 - symbol:wdr61 "WD repeat-containing pro... 623 7.1e-61 1
ZFIN|ZDB-GENE-040426-1851 - symbol:wdr61 "WD repeat domai... 622 9.0e-61 1
UNIPROTKB|Q5ZJH5 - symbol:WDR61 "WD repeat-containing pro... 609 2.2e-59 1
UNIPROTKB|F1NFT8 - symbol:WDR61 "WD repeat-containing pro... 608 2.7e-59 1
UNIPROTKB|Q32LN7 - symbol:WDR61 "WD repeat-containing pro... 593 1.1e-57 1
UNIPROTKB|E2RBV0 - symbol:WDR61 "Uncharacterized protein"... 592 1.4e-57 1
UNIPROTKB|Q9GZS3 - symbol:WDR61 "WD repeat-containing pro... 592 1.4e-57 1
MGI|MGI:1917493 - symbol:Wdr61 "WD repeat domain 61" spec... 590 2.2e-57 1
RGD|1308228 - symbol:Wdr61 "WD repeat domain 61" species:... 590 2.2e-57 1
UNIPROTKB|H0YN81 - symbol:WDR61 "WD repeat-containing pro... 571 2.3e-55 1
FB|FBgn0027524 - symbol:CG3909 species:7227 "Drosophila m... 534 1.9e-51 1
UNIPROTKB|F1RKU4 - symbol:WDR61 "Uncharacterized protein"... 451 1.2e-42 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 405 2.2e-36 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 345 2.0e-31 1
DICTYBASE|DDB_G0282793 - symbol:wdr61 "WD40 repeat-contai... 343 3.3e-31 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 322 5.6e-29 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 327 7.1e-28 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 312 3.0e-27 1
UNIPROTKB|H0YMF9 - symbol:WDR61 "WD repeat-containing pro... 305 3.5e-27 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 298 4.3e-26 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 293 6.6e-26 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 291 1.1e-25 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 287 2.9e-25 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 286 3.6e-25 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 286 3.6e-25 1
TAIR|locus:2060560 - symbol:LIS "AT2G41500" species:3702 ... 291 5.1e-25 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 284 5.9e-25 1
POMBASE|SPBC32F12.02 - symbol:rec14 "Ski complex subunit ... 284 5.9e-25 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 286 9.8e-25 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 286 9.8e-25 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 280 1.6e-24 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 278 2.6e-24 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 278 2.6e-24 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 278 2.6e-24 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 278 2.6e-24 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 278 2.6e-24 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 278 2.6e-24 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 277 3.3e-24 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 280 3.4e-24 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 284 3.4e-24 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 275 5.3e-24 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 274 7.1e-24 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 277 9.8e-24 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 272 1.1e-23 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 274 2.1e-23 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 267 5.1e-23 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 265 6.1e-23 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 266 7.9e-23 1
POMBASE|SPAC227.12 - symbol:SPAC227.12 "U4/U6 x U5 tri-sn... 267 1.1e-22 1
ZFIN|ZDB-GENE-030131-5143 - symbol:prpf4 "PRP4 pre-mRNA p... 268 1.3e-22 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 260 2.1e-22 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 260 2.1e-22 1
ASPGD|ASPL0000002074 - symbol:rcoA species:162425 "Emeric... 266 3.1e-22 1
MGI|MGI:2443143 - symbol:Wdr3 "WD repeat domain 3" specie... 244 3.6e-22 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 255 7.0e-22 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 256 9.4e-22 1
SGD|S000004119 - symbol:DIP2 "Nucleolar protein" species:... 247 1.2e-21 2
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 186 1.4e-21 2
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 260 2.1e-21 1
UNIPROTKB|P74598 - symbol:sll1491 "Uncharacterized WD rep... 248 3.9e-21 1
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 252 7.4e-21 1
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 252 7.4e-21 1
UNIPROTKB|F1SAY9 - symbol:WDR3 "Uncharacterized protein" ... 257 7.7e-21 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 243 1.5e-20 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 245 2.0e-20 1
POMBASE|SPBC3D6.12 - symbol:dip2 "U3 snoRNA associated pr... 253 2.0e-20 1
RGD|1311303 - symbol:Prpf4 "PRP4 pre-mRNA processing fact... 248 2.1e-20 1
UNIPROTKB|Q3MHE2 - symbol:PRPF4 "U4/U6 small nuclear ribo... 248 2.1e-20 1
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 240 2.7e-20 1
UNIPROTKB|G4MTR1 - symbol:MGG_04746 "DOM34-interacting pr... 252 2.7e-20 1
UNIPROTKB|O43172 - symbol:PRPF4 "U4/U6 small nuclear ribo... 247 2.8e-20 1
UNIPROTKB|F1PZB0 - symbol:PRPF4 "Uncharacterized protein"... 247 3.0e-20 1
UNIPROTKB|I3LDL8 - symbol:PRPF4 "Uncharacterized protein"... 247 3.0e-20 1
UNIPROTKB|Q9UNX4 - symbol:WDR3 "WD repeat-containing prot... 250 4.3e-20 1
MGI|MGI:1917302 - symbol:Prpf4 "PRP4 pre-mRNA processing ... 245 4.5e-20 1
UNIPROTKB|G4MUR7 - symbol:MGG_08829 "Transcriptional repr... 245 6.6e-20 1
RGD|1307480 - symbol:Wdr3 "WD repeat domain 3" species:10... 248 7.0e-20 1
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 244 8.2e-20 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 239 8.3e-20 1
UNIPROTKB|E1BM03 - symbol:WDR3 "Uncharacterized protein" ... 247 9.0e-20 1
DICTYBASE|DDB_G0293070 - symbol:DDB_G0293070 "TROVE domai... 244 9.2e-20 2
ASPGD|ASPL0000054401 - symbol:AN0305 species:162425 "Emer... 247 9.3e-20 1
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 246 1.2e-19 1
ASPGD|ASPL0000054968 - symbol:AN1387 species:162425 "Emer... 234 1.2e-19 1
DICTYBASE|DDB_G0282623 - symbol:wdr3 "U3 snoRNP protein" ... 245 1.5e-19 1
UNIPROTKB|F1NNQ9 - symbol:PRPF4 "Uncharacterized protein"... 240 1.6e-19 1
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 239 1.7e-19 1
FB|FBgn0036733 - symbol:U4-U6-60K "U4-U6 small nuclear ri... 240 1.9e-19 1
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 238 2.2e-19 1
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 238 2.2e-19 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 238 2.2e-19 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 236 2.5e-19 1
UNIPROTKB|F1NC11 - symbol:WDR3 "Uncharacterized protein" ... 241 3.9e-19 1
UNIPROTKB|G4MXN3 - symbol:MGG_01259 "Pre-mRNA splicing fa... 236 4.6e-19 1
FB|FBgn0021874 - symbol:Nle "Notchless" species:7227 "Dro... 217 5.9e-19 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 231 7.1e-19 1
DICTYBASE|DDB_G0287337 - symbol:taf5 "TFIID subunit" spec... 230 8.4e-19 2
UNIPROTKB|O14727 - symbol:APAF1 "Apoptotic protease-activ... 238 1.2e-18 1
WARNING: Descriptions of 1371 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2123929 [details] [associations]
symbol:VIP3 "AT4G29830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009910 "negative regulation
of flower development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IPI] [GO:0010452 "histone H3-K36 methylation"
evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL050352 EMBL:AL161575
GO:GO:0009910 GO:GO:0051568 HSSP:P16649 GO:GO:0080008 GO:GO:0010452
UniGene:At.23602 UniGene:At.72983 HOGENOM:HOG000036765 KO:K12602
OMA:PPSEVWG EMBL:BT008333 IPI:IPI00518529 PIR:T08544
RefSeq:NP_194712.1 SMR:Q9SZQ5 IntAct:Q9SZQ5 STRING:Q9SZQ5
EnsemblPlants:AT4G29830.1 GeneID:829105 KEGG:ath:AT4G29830
TAIR:At4g29830 InParanoid:Q9SZQ5 ProtClustDB:CLSN2685393
Genevestigator:Q9SZQ5 Uniprot:Q9SZQ5
Length = 321
Score = 1325 (471.5 bits), Expect = 2.9e-135, P = 2.9e-135
Identities = 251/321 (78%), Positives = 284/321 (88%)
Query: 1 MKFAGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHC 60
MK AGLKS+ENAHE+SVWA TWVPATE RPALLLTGSLDETVKLWRPD++ L RTNTGH
Sbjct: 1 MKLAGLKSIENAHEDSVWAATWVPATEDRPALLLTGSLDETVKLWRPDELDLVRTNTGHS 60
Query: 61 LGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVA 120
LGV ++AAHPSGIIAAS+S+DSFVRVFDVDTNA+IA LEA PSEVW MQF+PKGT LAVA
Sbjct: 61 LGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVA 120
Query: 121 GGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG 180
GG SASVKLWDTA+W LI+TLSIPRP+ KP+DK+SSKKFVLSVAWSP+G+R+ACGSMDG
Sbjct: 121 GGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDG 180
Query: 181 TISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS 240
TI VFDV R+K LH LEGH MPVRSLV+SPVDPRVLFS SDD HV+M+DAEGK+L+ +MS
Sbjct: 181 TICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMS 240
Query: 241 GHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGG-- 298
GH SWVLSVDASPDG AI TGSSDRTV+LWDL MRAA+Q+M+NH DQVW V+FRP GG
Sbjct: 241 GHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTG 300
Query: 299 ----RVVSVSDDKSISLYEYS 315
R+ SVSDDKS+SLY+YS
Sbjct: 301 VRAGRLASVSDDKSVSLYDYS 321
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 124/306 (40%), Positives = 191/306 (62%)
Query: 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNT--GHCLGVVSVA 67
E+AHE+++W+V W + L+++GSLD+ VK+W+ D +LE +T GH LGVVSV
Sbjct: 12 EHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVD 71
Query: 68 AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
PSG I AS+SLD+ +R++D+++ I ++A P + W + F P LA G V
Sbjct: 72 VSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLAT-GSHVGKV 130
Query: 128 KLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 187
++ T G K + KF+LS+A+SPDG+ +A G++DG I++FD+
Sbjct: 131 NIFGVET-------------GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 188 TRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVL 247
K LH LEGH MP+RSL +SP D ++L +ASDD ++ +Y+ + SL +SGH SWVL
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVL 236
Query: 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDK 307
+V SPD + SSD++VK+WD++ R + + +H DQVWGV + G ++VSV+DD+
Sbjct: 237 NVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQ 296
Query: 308 SISLYE 313
I +Y+
Sbjct: 297 EIHVYD 302
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 73/245 (29%), Positives = 119/245 (48%)
Query: 74 IAASASLDSFVRVFD-VDTNASI-ATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWD 131
+ S SLD V+V+ D + +TLE V + P G +A + A ++LWD
Sbjct: 34 LVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMA-SSSLDAHIRLWD 92
Query: 132 TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK 191
+ I + G P D SVA+SPD + +A GS G +++F V K
Sbjct: 93 LESGKQIRAIDA----G--PVD-------AWSVAFSPDSQHLATGSHVGKVNIFGVETGK 139
Query: 192 FLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHASWVLSVD 250
+ L+ + S+ YSP D + L S + D ++++D A GK L T + GHA + S+
Sbjct: 140 KEYSLDTRGKFILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHT-LEGHAMPIRSLT 197
Query: 251 ASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSIS 310
SPD + T S D +K++++ + +++ H V V+F P VS S DKS+
Sbjct: 198 FSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVK 257
Query: 311 LYEYS 315
+++ S
Sbjct: 258 VWDVS 262
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 124/306 (40%), Positives = 189/306 (61%)
Query: 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLER--TNTGHCLGVVSVA 67
E+AHE+++W+V W + L+++GSLD+ VK+W+ D +LE GH LGVVSV
Sbjct: 12 EHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVD 71
Query: 68 AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
PSG I AS+SLD+ +R++D+++ I +++A P + W + F P LA G V
Sbjct: 72 VSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLAT-GSHVGKV 130
Query: 128 KLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 187
++ T G K + KF+LS+A+SPDG+ +A G++DG I++FD+
Sbjct: 131 NIFGVET-------------GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 188 TRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVL 247
K LH LEGH MP+RSL +S D ++L +ASDD ++ +YD + SL +SGH SWVL
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFS-TDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVL 236
Query: 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDK 307
+V SPD A + SSD++VK+WD++ R + + +H DQVWGV + G ++VSV DD+
Sbjct: 237 NVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQ 296
Query: 308 SISLYE 313
I +Y+
Sbjct: 297 EIHVYD 302
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 72/245 (29%), Positives = 117/245 (47%)
Query: 74 IAASASLDSFVRVFD-VDTNASIA-TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWD 131
+ S SLD V+V+ D + LE V + P G +A + A ++LWD
Sbjct: 34 LVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSPSGNIMA-SSSLDAHIRLWD 92
Query: 132 TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK 191
+ I ++ G P D SVA+SPD + +A GS G +++F V K
Sbjct: 93 LESGKQIRSIDA----G--PVD-------AWSVAFSPDSQHLATGSHVGKVNIFGVETGK 139
Query: 192 FLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHASWVLSVD 250
+ L+ + S+ YSP D + L S + D ++++D A GK L T + GHA + S+
Sbjct: 140 KEYSLDTRGKFILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHT-LEGHAMPIRSLT 197
Query: 251 ASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSIS 310
S D + T S D +K++D+ + +++ H V V+F P VS S DKS+
Sbjct: 198 FSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVK 257
Query: 311 LYEYS 315
+++ S
Sbjct: 258 VWDVS 262
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
Identities = 122/306 (39%), Positives = 191/306 (62%)
Query: 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD--MQLERTNTGHCLGVVSVA 67
E+AHE+++W W + + ++TGSLD+ VK+W+ D ++L+ T GH LGVVSV
Sbjct: 12 EHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVN 71
Query: 68 AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
+G IAAS+SLD+ +R++D++T I +++A P + W + F P +A GS
Sbjct: 72 ISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIAT---GSHLG 128
Query: 128 KLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 187
K+ N+ S G K + KF+LS+A+SPDG+ +A G++DG I++FD+
Sbjct: 129 KV------NIFGVES-----GKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 188 TRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVL 247
K LH LEGH MP+RSL +SP D ++L +ASDD ++ +YD + +L +SGH SWVL
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVL 236
Query: 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDK 307
SV SPD + SSD+++K+WD + R+ + + +H DQVW V + P G ++VS DD+
Sbjct: 237 SVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDR 296
Query: 308 SISLYE 313
+I +Y+
Sbjct: 297 AIHIYD 302
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 75/242 (30%), Positives = 116/242 (47%)
Query: 77 SASLDSFVRVFD-VDTNASIA-TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT 134
+ SLD V+V+ D + TLE V + G +A + A ++LWD T
Sbjct: 37 TGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGA-IAASSSLDAHIRLWDLET 95
Query: 135 WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLH 194
I ++ G P D +VA+SPD + IA GS G +++F V K H
Sbjct: 96 GKQIKSMDA----G--PVD-------AWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEH 142
Query: 195 HLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHASWVLSVDASP 253
L+ + S+ YSP D + L S + D ++++D A GK L T + GHA + S+ SP
Sbjct: 143 SLDTRGKFILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHT-LEGHAMPIRSLTFSP 200
Query: 254 DGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
D + T S D +K++D+ +++ H V V+F P VS S DKSI +++
Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWD 260
Query: 314 YS 315
S
Sbjct: 261 TS 262
Score = 213 (80.0 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 67/246 (27%), Positives = 113/246 (45%)
Query: 31 ALLLTGSLDETVKLWRPDD-MQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDV 89
A+ + SLD ++LW + Q++ + G + +VA P A+ S V +F V
Sbjct: 77 AIAASSSLDAHIRLWDLETGKQIKSMDAGP-VDAWTVAFSPDSKYIATGSHLGKVNIFGV 135
Query: 90 DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEG- 148
++ +L+ + + + P G LA +G + ++D AT L+ TL EG
Sbjct: 136 ESGKKEHSLDTRGKFILSIAYSPDGKYLA-SGAIDGIINIFDIATGKLLHTL-----EGH 189
Query: 149 LKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVY 208
P + S+ +SPD + + S DG I ++DV A L GH V S+ +
Sbjct: 190 AMP---------IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAF 240
Query: 209 SPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVK 268
SP D + S+SD + + ++D +S V H V SV +P G+ I + DR +
Sbjct: 241 SPDDTHFVSSSSDKS-IKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIH 299
Query: 269 LWDLNM 274
++D M
Sbjct: 300 IYDCPM 305
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 120/306 (39%), Positives = 186/306 (60%)
Query: 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD--MQLERTNTGHCLGVVSVA 67
E AH++++W+V W + +++GSLD+ VK+W+ +D + L+ T GH LGVVSV
Sbjct: 12 EQAHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVD 71
Query: 68 AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
+G IAAS+SLD+ +R++D++T I +++A P + W + F P LA G V
Sbjct: 72 ISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLAT-GSHVGKV 130
Query: 128 KLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 187
++ T G K + KF+LS+A+SPDG+ +A G++DG I++FD+
Sbjct: 131 NIFGVET-------------GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 188 TRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVL 247
K LH LEGH MP+RSL +SP D ++L +ASDD ++ +YD + +L +SGH SWVL
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVL 236
Query: 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDK 307
+V PD + SSD++VK+WD R + + +H DQVWGV + G ++VSV DD+
Sbjct: 237 NVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQ 296
Query: 308 SISLYE 313
I +Y+
Sbjct: 297 EIHIYD 302
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 120/306 (39%), Positives = 186/306 (60%)
Query: 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD--MQLERTNTGHCLGVVSVA 67
E AH++++W+V W + +++GSLD+ VK+W+ +D + L+ T GH LGVVSV
Sbjct: 12 EQAHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVD 71
Query: 68 AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
+G IAAS+SLD+ +R++D++T I +++A P + W + F P LA G V
Sbjct: 72 ISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLAT-GSHVGKV 130
Query: 128 KLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 187
++ T G K + KF+LS+A+SPDG+ +A G++DG I++FD+
Sbjct: 131 NIFGVET-------------GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 188 TRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVL 247
K LH LEGH MP+RSL +SP D ++L +ASDD ++ +YD + +L +SGH SWVL
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVL 236
Query: 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDK 307
+V PD + SSD++VK+WD R + + +H DQVWGV + G ++VSV DD+
Sbjct: 237 NVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQ 296
Query: 308 SISLYE 313
I +Y+
Sbjct: 297 EIHIYD 302
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 120/306 (39%), Positives = 187/306 (61%)
Query: 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLW--RPDDMQLERTNTGHCLGVVSVA 67
E AH++++W+V W + ++TGSLD+ VK+W R + + L+ + GH LGVVSV
Sbjct: 12 EQAHDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVD 71
Query: 68 AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
+ IAAS+SLD+ +R++D++ I +++A P + W + F P LA G+
Sbjct: 72 ISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLAT---GTHVG 128
Query: 128 KLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 187
K+ N+ S G K + KF+LS+A+SPDG+ +A G++DG I++FD+
Sbjct: 129 KV------NIFGVES-----GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 188 TRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVL 247
K LH LEGH MP+RSL +SP D ++L +ASDD ++ +YD + +L +SGHASWVL
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVL 236
Query: 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDK 307
+V PD + SSD++VK+WD+ R + + +H DQVWGV + G ++VSV DD+
Sbjct: 237 NVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQ 296
Query: 308 SISLYE 313
I +Y+
Sbjct: 297 EIHIYD 302
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 121/306 (39%), Positives = 187/306 (61%)
Query: 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD--MQLERTNTGHCLGVVSVA 67
E AH++++W+V W + ++TGSLD+ VK+W+ D + L+ + GH LGVVSV
Sbjct: 12 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSVD 71
Query: 68 AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
+ IAAS+SLD+ +R++D+D I +++A P + W + F P LA G+
Sbjct: 72 ISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQYLAT---GTHVG 128
Query: 128 KLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 187
K+ N+ S G K + KF+LS+A+SPDG+ +A G++DG I++FD+
Sbjct: 129 KV------NIFGVES-----GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 188 TRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVL 247
K LH LEGH MP+RSL +SP D ++L +ASDD ++ +YD + +L +SGHASWVL
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVL 236
Query: 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDK 307
+V PD + SSD++VK+WD+ R + + +H DQVWGV + G ++VSV DD+
Sbjct: 237 NVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQ 296
Query: 308 SISLYE 313
I +Y+
Sbjct: 297 EIHVYD 302
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 120/306 (39%), Positives = 187/306 (61%)
Query: 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLW--RPDDMQLERTNTGHCLGVVSVA 67
E AH++++W+V W + ++TGSLD+ VK+W R + + L+ + GH LGVVSV
Sbjct: 12 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVD 71
Query: 68 AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
+ IAAS+SLD+ +R++D++ I +++A P + W + F P LA G+
Sbjct: 72 ISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLAT---GTHVG 128
Query: 128 KLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 187
K+ N+ S G K + KF+LS+A+SPDG+ +A G++DG I++FD+
Sbjct: 129 KV------NIFGVES-----GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 188 TRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVL 247
K LH LEGH MP+RSL +SP D ++L +ASDD ++ +YD + +L +SGHASWVL
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVL 236
Query: 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDK 307
+V PD + SSD++VK+WD+ R + + +H DQVWGV + G ++VSV DD+
Sbjct: 237 NVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQ 296
Query: 308 SISLYE 313
I +Y+
Sbjct: 297 EIHIYD 302
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 119/306 (38%), Positives = 188/306 (61%)
Query: 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLW--RPDDMQLERTNTGHCLGVVSVA 67
E AH++++W+V W + ++TGSLD+ VK+W R + ++L+ + GH LGVVSV
Sbjct: 12 EQAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVD 71
Query: 68 AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
+ IAAS+SLD+ +R++D++ + +++A P + W + F P LA G+
Sbjct: 72 ISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQYLAT---GTHMG 128
Query: 128 KLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 187
K+ N+ S G K + KF+LS+A+SPDG+ +A G++DG I++FD+
Sbjct: 129 KV------NIFGVES-----GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 188 TRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVL 247
K LH LEGH MP+RSL +SP D ++L +ASDD ++ +YD + +L +SGHASWVL
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVL 236
Query: 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDK 307
+V PD + SSD++VK+WD+ R + + +H DQVWGV + G ++VSV DD+
Sbjct: 237 NVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQ 296
Query: 308 SISLYE 313
I +Y+
Sbjct: 297 EIHVYD 302
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 119/306 (38%), Positives = 188/306 (61%)
Query: 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLW--RPDDMQLERTNTGHCLGVVSVA 67
E AH++++W+V W + ++TGSLD+ VK+W R + ++L+ + GH LGVVSV
Sbjct: 12 EQAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVD 71
Query: 68 AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
+ IAAS+SLD+ +R++D++ + +++A P + W + F P LA G+
Sbjct: 72 ISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQHLAT---GTHMG 128
Query: 128 KLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 187
K+ N+ S G K + KF+LS+A+SPDG+ +A G++DG I++FD+
Sbjct: 129 KV------NIFGVES-----GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 188 TRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVL 247
K LH LEGH MP+RSL +SP D ++L +ASDD ++ +YD + +L +SGHASWVL
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVL 236
Query: 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDK 307
+V PD + SSD++VK+WD+ R + + +H DQVWGV + G ++VSV DD+
Sbjct: 237 NVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQ 296
Query: 308 SISLYE 313
I +Y+
Sbjct: 297 EIHVYD 302
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 117/298 (39%), Positives = 181/298 (60%)
Query: 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLW--RPDDMQLERTNTGHCLGVVSVA 67
E AH++++W+V W + ++TGSLD+ VK+W R + + L+ + GH LGVVSV
Sbjct: 12 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVD 71
Query: 68 AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
+ IAAS+SLD+ +R++D++ I +++A P + W + F P LA G+
Sbjct: 72 ISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLAT---GTHVG 128
Query: 128 KLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 187
K+ N+ S G K + KF+LS+A+SPDG+ +A G++DG I++FD+
Sbjct: 129 KV------NIFGVES-----GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 188 TRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVL 247
K LH LEGH MP+RSL +SP D ++L +ASDD ++ +YD + +L +SGHASWVL
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVL 236
Query: 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSD 305
+V PD + SSD++VK+WD+ R + + +H DQVWGV + G ++VSV D
Sbjct: 237 NVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGD 294
Score = 199 (75.1 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 60/201 (29%), Positives = 100/201 (49%)
Query: 116 TLAVAGGGS--ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI 173
TL +A S A ++LWD I ++ G P D ++A+SPD + +
Sbjct: 75 TLPIAASSSLDAHIRLWDLENGKQIKSIDA----G--PVD-------AWTLAFSPDSQYL 121
Query: 174 ACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEG 232
A G+ G +++F V K + L+ + S+ YSP D + L S + D ++++D A G
Sbjct: 122 ATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP-DGKYLASGAIDGIINIFDIATG 180
Query: 233 KSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVS 292
K L T + GHA + S+ SPD + T S D +K++D+ +++ H V V+
Sbjct: 181 KLLHT-LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVA 239
Query: 293 FRPLGGRVVSVSDDKSISLYE 313
F P VS S DKS+ +++
Sbjct: 240 FCPDDTHFVSSSSDKSVKVWD 260
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 126/336 (37%), Positives = 182/336 (54%)
Query: 3 FAGLKSVENAHEESVWAVTWVPAT----------------------ETRPA-LLLTGSLD 39
F+ L ENAH+ +WA TW T E RP L+TG LD
Sbjct: 2 FSVLHKEENAHDSQLWACTWGRDTAASDPDDAVVEPEENPFDFDKKEARPKDFLVTGGLD 61
Query: 40 ETVKLW--RPDD-MQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIA 96
+ VK+W + D+ ++L GH LGVVSVA G AS+SLDS + ++D +
Sbjct: 62 DLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKH 121
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
L P ++W +QF P + ++G + ++ T TL +
Sbjct: 122 LLSFGPVDLWTVQFSPCNKYV-ISGLNDGKISMYSVETGKAEQTLD------------AQ 168
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVL 216
+ K+ LS+A+SPDG+ IA G++DG I++FDV K + LEGH MPVRSL +SP + ++L
Sbjct: 169 NGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSP-NSQLL 227
Query: 217 FSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRA 276
+ASDD H+ +YD +V +SGHASWVL V S DG + SSD +VK+WD + R
Sbjct: 228 LTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERK 287
Query: 277 AMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+ + HTDQVWGV + P +V S S+DKS+++Y
Sbjct: 288 CLHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 192 (72.6 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 71/249 (28%), Positives = 116/249 (46%)
Query: 68 AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
AH S + A + D+ D + ++ E +P + + + PK V GG V
Sbjct: 11 AHDSQLWACTWGRDTAAS----DPDDAVVEPEENPFDFDKKEARPKD--FLVTGGLDDLV 64
Query: 128 KLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 187
K+WD N TL + LK V+SVA S DG+ IA S+D T+ ++D
Sbjct: 65 KVWDLQEDN---TLKLRHK--LK-----GHALGVVSVAVSSDGQTIASSSLDSTMCLWDA 114
Query: 188 TRAKFLHHLEGHFMPVR--SLVYSPVDPRVLFSASDDTHVHMYDAE-GKSLVTAMSGHAS 244
H L F PV ++ +SP + V+ S +D + MY E GK+ T + +
Sbjct: 115 RSGDKKHLLS--FGPVDLWTVQFSPCNKYVI-SGLNDGKISMYSVETGKAEQTLDAQNGK 171
Query: 245 WVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVS 304
+ LS+ SPDG I +G+ D + ++D+ +Q++ H V + F P +++ S
Sbjct: 172 YTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTAS 231
Query: 305 DDKSISLYE 313
DD + LY+
Sbjct: 232 DDGHMKLYD 240
Score = 169 (64.5 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 64/252 (25%), Positives = 113/252 (44%)
Query: 68 AHPSGIIAASASLDSFVRVFDVDTNASIAT---LEASPSEVWQMQFDPKGTTLAVAGGGS 124
A P + + LD V+V+D+ + ++ L+ V + G T+A + S
Sbjct: 49 ARPKDFLV-TGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDS 107
Query: 125 ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISV 184
++ LWD + + LS G P D + +V +SP + + G DG IS+
Sbjct: 108 -TMCLWDARSGDKKHLLSF----G--PVD-------LWTVQFSPCNKYVISGLNDGKISM 153
Query: 185 FDVTRAKFLHHLEG-HFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHA 243
+ V K L+ + S+ YSP D + + S + D + ++D +V + GHA
Sbjct: 154 YSVETGKAEQTLDAQNGKYTLSIAYSP-DGKYIASGAIDGIITIFDVAAGKVVQTLEGHA 212
Query: 244 SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSV 303
V S+ SP+ + T S D +KL+D+ + +++ H V V+F G S
Sbjct: 213 MPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASS 272
Query: 304 SDDKSISLYEYS 315
S D S+ +++ S
Sbjct: 273 SSDNSVKIWDTS 284
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 90/230 (39%), Positives = 139/230 (60%)
Query: 84 VRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSI 143
VR++D++ I +++A P + W + F P LA G+ K+ N+ S
Sbjct: 70 VRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLAT---GTHVGKV------NIFGVES- 119
Query: 144 PRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPV 203
G K + KF+LS+A+SPDG+ +A G++DG I++FD+ K LH LEGH MP+
Sbjct: 120 ----GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 175
Query: 204 RSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSS 263
RSL +SP D ++L +ASDD ++ +YD + +L +SGHASWVL+V PD + SS
Sbjct: 176 RSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSS 234
Query: 264 DRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
D++VK+WD+ R + + +H DQVWGV + G ++VSV DD+ I +Y+
Sbjct: 235 DKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 284
Score = 199 (75.1 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 61/213 (28%), Positives = 105/213 (49%)
Query: 104 EVWQMQFDPKGTTLAVAGG--GSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFV 161
+VW+ + + ++ G G SV+LWD I ++ G P D
Sbjct: 45 KVWKWRDEKLDLQWSLEGHQLGVVSVRLWDLENGKQIKSIDA----G--PVD-------A 91
Query: 162 LSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASD 221
++A+SPD + +A G+ G +++F V K + L+ + S+ YSP D + L S +
Sbjct: 92 WTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP-DGKYLASGAI 150
Query: 222 DTHVHMYD-AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS 280
D ++++D A GK L T + GHA + S+ SPD + T S D +K++D+ +
Sbjct: 151 DGIINIFDIATGKLLHT-LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT 209
Query: 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
++ H V V+F P VS S DKS+ +++
Sbjct: 210 LSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 242
Score = 170 (64.9 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 55/224 (24%), Positives = 97/224 (43%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS 65
+KS++ A W + + P ++ L TG+ V ++ + + E + ++S
Sbjct: 81 IKSID-AGPVDAWTLAFSPDSQ----YLATGTHVGKVNIFGVESGKKEYSLDTRGKFILS 135
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
+A P G AS ++D + +FD+ T + TLE + + F P + L V
Sbjct: 136 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTASDDG 194
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
+K++D NL TLS +VL+VA+ PD S D ++ V+
Sbjct: 195 YIKIYDVQHANLAGTLS-------------GHASWVLNVAFCPDDTHFVSSSSDKSVKVW 241
Query: 186 DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
DV +H H V + Y+ +++ S DD +H+YD
Sbjct: 242 DVGTRTCVHTFFDHQDQVWGVKYNGNGSKIV-SVGDDQEIHIYD 284
Score = 143 (55.4 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 34/111 (30%), Positives = 57/111 (51%)
Query: 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLW--RPDDMQLERTNTGHCLGVVSVA 67
E AH++++W+V W + ++TGSLD+ VK+W R + + L+ + GH LGVVSV
Sbjct: 12 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSV- 70
Query: 68 AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLA 118
R++D++ I +++A P + W + F P LA
Sbjct: 71 -----------------RLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLA 104
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 405 (147.6 bits), Expect = 2.2e-36, P = 2.2e-36
Identities = 100/281 (35%), Positives = 148/281 (52%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L++GS D+TVK+W P +L +T GH V S+A P G + AS S D+ + ++D T
Sbjct: 765 LVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATG 824
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ T E P +W + F P G LA A S ++K+WD AT L TL
Sbjct: 825 ELLQTFEGHPHSIWSVAFAPDGKELASASDDS-TIKIWDLATGELQQTLD---------- 873
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
S + V SVA+SPDG+ +A S+D TI V++ + LEG V+S+ +SP D
Sbjct: 874 ---SHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSP-D 929
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ L S S+ V +++ L+ + GH+ V SV SPDG + + SSD T+KLW+
Sbjct: 930 GKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNS 989
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
Q+ H + V+F P G +VS SDD +I L++
Sbjct: 990 TTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWD 1030
Score = 402 (146.6 bits), Expect = 4.6e-36, P = 4.6e-36
Identities = 101/282 (35%), Positives = 154/282 (54%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL +GS D T+ LW +L +T GH + SVA P G ASAS DS ++++D+ T
Sbjct: 806 LLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLAT 865
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
TL++ V + F P G LA + S ++K+W+ AT L +L EG
Sbjct: 866 GELQQTLDSHSQSVRSVAFSPDGKLLASSSLDS-TIKVWNPATGELQQSL-----EG--- 916
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
+S +V SVA+SPDG+++A GS T+ +++ + L LEGH VRS+ +SP
Sbjct: 917 --RSG---WVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSP- 970
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
D + L S+S DT + ++++ L GH W+ +V SPDG + +GS D T+KLWD
Sbjct: 971 DGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWD 1030
Query: 272 LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
L QS+ +H+ V V+F P ++ S S D +I L++
Sbjct: 1031 LATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWD 1072
Score = 370 (135.3 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 99/294 (33%), Positives = 151/294 (51%)
Query: 22 WVPATETRP--ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASAS 79
WV + P L +GS TVKLW P +L +T GH V SVA P G AS+S
Sbjct: 920 WVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSS 979
Query: 80 LDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIA 139
D+ +++++ T T + + + F P G L V+G ++KLWD AT L
Sbjct: 980 SDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHL-VSGSDDNTIKLWDLATSELQQ 1038
Query: 140 TLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGH 199
+L D S S V +VA+SPD +++A S+D TI ++D + LEGH
Sbjct: 1039 SLE----------DHSRS---VHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGH 1085
Query: 200 FMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAIT 259
VRS+ +SP D ++L S S D + +++ L ++G + WV SV SPDG +
Sbjct: 1086 SQGVRSVTFSP-DGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLA 1144
Query: 260 TGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+G D T+KLWD +Q++ H+D++ V F P G + S S D++ L++
Sbjct: 1145 SGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWD 1198
Score = 366 (133.9 bits), Expect = 3.2e-32, P = 3.2e-32
Identities = 97/284 (34%), Positives = 145/284 (51%)
Query: 22 WVPATETRP--ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASAS 79
W+ A P L++GS D T+KLW +L+++ H V +VA P AS+S
Sbjct: 1004 WIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSS 1063
Query: 80 LDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIA 139
LDS ++++D T TLE V + F P G LA + ++KLW+ T L
Sbjct: 1064 LDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLA-SNSYDGTIKLWNPLTGELQQ 1122
Query: 140 TLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGH 199
TL T +S +V SVA+SPDG+++A G D TI ++D + L LEGH
Sbjct: 1123 TL----------TGRSD---WVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGH 1169
Query: 200 FMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAIT 259
++S+V+SP D ++L S S D ++D L+ GH+ WV SV SPDG +
Sbjct: 1170 SDRIQSVVFSP-DGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLA 1228
Query: 260 TGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSV 303
+ S T+KLWD +Q++ + + V+F P G R+ SV
Sbjct: 1229 SSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASV 1272
Score = 337 (123.7 bits), Expect = 3.9e-29, P = 3.9e-29
Identities = 88/275 (32%), Positives = 137/275 (49%)
Query: 38 LDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIAT 97
L + + W + LE H V SV P G S S D V+++D T + T
Sbjct: 732 LPKVEQTWSAEQQTLEN----HLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQT 787
Query: 98 LEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSS 157
L+ V + F P G LA +G ++ LWD+AT L+ T EG P
Sbjct: 788 LDGHSGTVESLAFSPDGKLLA-SGSYDNTIDLWDSATGELLQTF-----EG-HPHS---- 836
Query: 158 KKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLF 217
+ SVA++PDG+ +A S D TI ++D+ + L+ H VRS+ +SP D ++L
Sbjct: 837 ---IWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSP-DGKLLA 892
Query: 218 SASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA 277
S+S D+ + +++ L ++ G + WV SV SPDG + +GS TVKLW+
Sbjct: 893 SSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGEL 952
Query: 278 MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+Q++ H+ V V+F P G ++ S S D +I L+
Sbjct: 953 LQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLW 987
Score = 329 (120.9 bits), Expect = 2.8e-28, P = 2.8e-28
Identities = 92/281 (32%), Positives = 143/281 (50%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L + S D T+KLW +L++T GH L + +VA P G S S D+ ++++D+ T+
Sbjct: 975 LASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATS 1034
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+LE V + F P LA + S ++KLWD+AT L TL EG
Sbjct: 1035 ELQQSLEDHSRSVHAVAFSPDDKQLASSSLDS-TIKLWDSATGELQRTL-----EG---- 1084
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
+ V SV +SPDG+ +A S DGTI +++ + L G V S+ +SP D
Sbjct: 1085 ----HSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSP-D 1139
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ L S D+ + ++D+ L+ + GH+ + SV SPDG + +GS D+T KLWD
Sbjct: 1140 GKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDP 1199
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+Q H+ V V+F P G + S S ++I L++
Sbjct: 1200 ATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWD 1240
Score = 297 (109.6 bits), Expect = 7.2e-25, P = 7.2e-25
Identities = 85/257 (33%), Positives = 129/257 (50%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L + SLD T+KLW +L+RT GH GV SV P G + AS S D +++++ T
Sbjct: 1059 LASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTG 1118
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
TL V + F P G LA +G +++KLWD+AT L+ TL EG +
Sbjct: 1119 ELQQTLTGRSDWVDSVAFSPDGKQLA-SGYYDSTIKLWDSATGELLQTL-----EG--HS 1170
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
D+ + SV +SPDG+ +A GS D T ++D + L EGH V S+ +SP D
Sbjct: 1171 DR------IQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSP-D 1223
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
++L S+S + ++D L+ ++ SV SPDG + + T K+WD
Sbjct: 1224 GKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDT-KIWDP 1282
Query: 273 NMRAAMQSMTNHTDQVW 289
+Q++ H+ VW
Sbjct: 1283 ATGELLQALKGHSKWVW 1299
Score = 255 (94.8 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 57/181 (31%), Positives = 96/181 (53%)
Query: 135 WNLIATLSIPRPEGLKPTDKSSSKKF---VLSVAWSPDGRRIACGSMDGTISVFDVTRAK 191
+NL +P+ E ++ + + V SV +SPDG+++ GS D T+ ++D +
Sbjct: 724 YNLSGWSQLPKVEQTWSAEQQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGE 783
Query: 192 FLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDA 251
L L+GH V SL +SP D ++L S S D + ++D+ L+ GH + SV
Sbjct: 784 LLQTLDGHSGTVESLAFSP-DGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAF 842
Query: 252 SPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISL 311
+PDG + + S D T+K+WDL Q++ +H+ V V+F P G + S S D +I +
Sbjct: 843 APDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKV 902
Query: 312 Y 312
+
Sbjct: 903 W 903
Score = 246 (91.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 73/217 (33%), Positives = 103/217 (47%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL + S D T+KLW P +L++T TG V SVA P G AS DS ++++D T
Sbjct: 1100 LLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSAT 1159
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ TLE + + F P G LA +G + KLWD AT L+ EG
Sbjct: 1160 GELLQTLEGHSDRIQSVVFSPDGKLLA-SGSYDQTAKLWDPATGELLQIF-----EG--- 1210
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
K+V SVA+SPDG+ +A S TI ++D + L L S+ +SP
Sbjct: 1211 -----HSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPD 1265
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248
R+ DT + +D L+ A+ GH+ WV S
Sbjct: 1266 GNRLASVDIFDTKI--WDPATGELLQALKGHSKWVWS 1300
Score = 217 (81.4 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 52/153 (33%), Positives = 80/153 (52%)
Query: 166 WSPDG---RRIACGSMDG--TISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSAS 220
+SP+G RRI ++ G + + T + LE H PV S+V+SP D + L S S
Sbjct: 711 FSPEGSITRRIFNYNLSGWSQLPKVEQTWSAEQQTLENHLGPVESVVFSP-DGKQLVSGS 769
Query: 221 DDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS 280
D V ++D L+ + GH+ V S+ SPDG + +GS D T+ LWD +Q+
Sbjct: 770 YDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQT 829
Query: 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
H +W V+F P G + S SDD +I +++
Sbjct: 830 FEGHPHSIWSVAFAPDGKELASASDDSTIKIWD 862
Score = 181 (68.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 48/136 (35%), Positives = 72/136 (52%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS 65
L++ E H S+W+V + P + L + S D T+K+W +L++T H V S
Sbjct: 827 LQTFEG-HPHSIWSVAFAPDGKE----LASASDDSTIKIWDLATGELQQTLDSHSQSVRS 881
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
VA P G + AS+SLDS ++V++ T +LE V + F P G LA +G
Sbjct: 882 VAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLA-SGSEKN 940
Query: 126 SVKLWDTATWNLIATL 141
+VKLW+ AT L+ TL
Sbjct: 941 TVKLWNPATGELLQTL 956
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 97/287 (33%), Positives = 148/287 (51%)
Query: 45 WRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSE 104
W P+ LE GH + +V P G + AS S D+ ++++D + TLE S
Sbjct: 30 WGPELQTLE----GHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSS 85
Query: 105 VWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL--------SIP-RPEG------- 148
V + F P G LA +G ++KLW++A+ +L T+ S+ P G
Sbjct: 86 VQSVAFSPNGQLLA-SGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAI 144
Query: 149 --LKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSL 206
LK T + S +VLSVA+SPDG+ +A GS + TI ++D H L GH V L
Sbjct: 145 GSLKHTIEGHSD-WVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPL 203
Query: 207 VYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRT 266
V+SP D R+L S S+D + ++D SL + GH++ + S+ SP+G + +GSSD T
Sbjct: 204 VFSP-DGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDAT 262
Query: 267 VKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+KLWD + ++ H+D V V F P + S S D +I L++
Sbjct: 263 IKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWD 309
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 93/286 (32%), Positives = 142/286 (49%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS 65
L+++E H + + VT+ P + R LL +GS D T+KLW P L++T GH V S
Sbjct: 34 LQTLEG-HSDWIETVTFSP--DGR--LLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQS 88
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
VA P+G + AS S D+ +++++ +++ T+E V + F P G A G S
Sbjct: 89 VAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIG-SL 147
Query: 126 SVKLWDTATWNLIATLSIPRPEG-----------LKPTDKSSS---------KKFVLSVA 165
+ + W L S P+G +K D ++ +VL +
Sbjct: 148 KHTIEGHSDWVLSVAFS---PDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLV 204
Query: 166 WSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHV 225
+SPDGR +A GS D TI ++D H LEGH + SL +SP + ++L S S D +
Sbjct: 205 FSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSP-NGQLLASGSSDATI 263
Query: 226 HMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
++D S + GH+ VLSV SPD + +GS D T+KLWD
Sbjct: 264 KLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWD 309
Score = 215 (80.7 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 63/197 (31%), Positives = 99/197 (50%)
Query: 22 WVPATETRP--ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASAS 79
WV + P LL +GS ++T+KLW L+ T GH V+ + P G + AS S
Sbjct: 157 WVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGS 216
Query: 80 LDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIA 139
D+ ++++D + + TLE +++ + F P G LA +G A++KLWDTAT +
Sbjct: 217 NDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLA-SGSSDATIKLWDTATGSFRH 275
Query: 140 TLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGH 199
TL K S VLSV +SPD + + GS D TI ++D H +
Sbjct: 276 TL------------KGHSD-MVLSVVFSPDSQLLESGSGDNTIKLWDPATGILKHSMRTP 322
Query: 200 FMPVRSLVYSPVDPRVL 216
+ VRS+ +S P+++
Sbjct: 323 GI-VRSIEFSIELPQLI 338
>DICTYBASE|DDB_G0282793 [details] [associations]
symbol:wdr61 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000047
GenomeReviews:CM000152_GR eggNOG:COG2319 HSSP:P16649
RefSeq:XP_640180.1 ProteinModelPortal:Q54S59
EnsemblProtists:DDB0267163 GeneID:8623719 KEGG:ddi:DDB_G0282793
OMA:CIWDIKT ProtClustDB:CLSZ2430473 Uniprot:Q54S59
Length = 299
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 86/286 (30%), Positives = 148/286 (51%)
Query: 32 LLLTGSLDETVKLWRPDDMQL--ER-TNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFD 88
++ TG + VK W + Q ER H LGV S+ A+ +D VR+FD
Sbjct: 25 IIATGGMGTKVKTWHGNQPQFLTERKVFDKHILGVTSLDIDIGARYLATGGMDGTVRLFD 84
Query: 89 VDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEG 148
+ TN T+++ P ++ F L V+ S ++ ++ T G
Sbjct: 85 LSTNTLHKTIDSGPLGCLKIGFLNSANNL-VSVSESGNISIYSVET-------------G 130
Query: 149 LKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVY 208
K S++ K VL++A SP+ +IA +DGT+ +DV + + ++ H +P+RSL +
Sbjct: 131 EKLRSISNTNKQVLTMAISPNNEQIAVAGLDGTVLCYDVESGRRVSEIKAHGVPIRSLCF 190
Query: 209 SPVDPRVLFSASDDTHVHMYDAEGKS-LVTAMSGHASWVLSVDASPDGAAI-TTGSSDRT 266
S D + +F+ ++D+ + ++D + + ++ GH+S++ S+ AS +G + ++GS DR
Sbjct: 191 SS-DSKTIFTGAEDSQIRLHDPNSSNPYIASLLGHSSFIFSLVASSNGDLLASSGSIDRK 249
Query: 267 VKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
V +WD+ R S T H DQ W ++F P ++VSVSDD SI Y
Sbjct: 250 VCIWDIKTRKLDSSFTAHADQTWDLAFSPDSTKLVSVSDDCSIHSY 295
Score = 147 (56.8 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 56/241 (23%), Positives = 104/241 (43%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L TG +D TV+L+ L +T LG + + S S S + ++ V+T
Sbjct: 71 LATGGMDGTVRLFDLSTNTLHKTIDSGPLGCLKIGFLNSANNLVSVSESGNISIYSVETG 130
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ ++ + +V M P +AVAG +V +D + ++ + + G+ P
Sbjct: 131 EKLRSISNTNKQVLTMAISPNNEQIAVAGL-DGTVLCYDVESGRRVSEI---KAHGV-P- 184
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK-FLHHLEGHFMPVRSLVYSPV 211
+ S+ +S D + I G+ D I + D + ++ L GH + SLV S
Sbjct: 185 --------IRSLCFSSDSKTIFTGAEDSQIRLHDPNSSNPYIASLLGHSSFIFSLVASSN 236
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
+ S S D V ++D + + L ++ + HA + SPD + + S D ++ +
Sbjct: 237 GDLLASSGSIDRKVCIWDIKTRKLDSSFTAHADQTWDLAFSPDSTKLVSVSDDCSIHSYA 296
Query: 272 L 272
L
Sbjct: 297 L 297
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 75/280 (26%), Positives = 137/280 (48%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+ TGS D+T KLW + + T GH +V ++ +P + A+ S+D+ +++D+ +
Sbjct: 150 IATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSG 209
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ TL +E+ + FD G + + G +V +WD +T + TL +
Sbjct: 210 EEVVTLTGHLAEIISLSFDTSGDRI-ITGSFDHTVVVWDASTGRKVHTL-------IGHC 261
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
+ SS F +W D I GSMD T ++D T K + L GH + +
Sbjct: 262 AEISSALF----SW--DCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTG 315
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+++ +AS D +Y+A + +T + GH + + +P G + TGSSD+T ++WD+
Sbjct: 316 -KLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDV 374
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+Q + HTD+++ +F G V++ S D S ++
Sbjct: 375 QTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 275 (101.9 bits), Expect = 6.7e-24, P = 6.7e-24
Identities = 73/281 (25%), Positives = 132/281 (46%)
Query: 34 LTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAH-PSGIIAASASLDSFVRVFDVDTN 92
+TGS D T K+W + T GH V ++A + P G A+ S D +++ +T
Sbjct: 108 ITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETG 167
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
T +E+ + F+P+ T +A G + KLWD + + TL+ E
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTVVAT-GSMDTTAKLWDIQSGEEVVTLTGHLAE----- 221
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
++S+++ G RI GS D T+ V+D + + +H L GH + S ++S D
Sbjct: 222 --------IISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFS-WD 272
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
++ + S D ++DA V ++GH +L G I T S+D T ++++
Sbjct: 273 CSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNA 332
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
R + + H ++ +SF P G R+++ S DK+ +++
Sbjct: 333 TTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWD 373
Score = 235 (87.8 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 73/291 (25%), Positives = 128/291 (43%)
Query: 23 VPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDS 82
+ A+ T+ LL L E ++ + L + H L + +VA + +G + S D
Sbjct: 55 ITASRTKQVRLLVQRLQEKLRQHCDHNFYLFKVLRAHILPLTNVALNKAGSCFITGSYDR 114
Query: 83 FVRVFDVDTNASIATLEASPSEVWQMQFD-PKGTTLAVAGGGSASVKLWDTATWNLIATL 141
+V+D + + TLE + V+ + F+ P G +A G + KLW T T
Sbjct: 115 TCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIAT-GSFDKTCKLWSAETGKCYHTF 173
Query: 142 SIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFM 201
E ++ ++++P +A GSMD T ++D+ + + L GH
Sbjct: 174 RGHTAE-------------IVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLA 220
Query: 202 PVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTG 261
+ SL + R++ + D T V ++DA V + GH + + S S D + I TG
Sbjct: 221 EIISLSFDTSGDRIITGSFDHTVV-VWDASTGRKVHTLIGHCAEISSALFSWDCSLILTG 279
Query: 262 SSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
S D+T LWD + ++T H D++ F G + + S D + +Y
Sbjct: 280 SMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVY 330
Score = 231 (86.4 bits), Expect = 7.4e-19, P = 7.4e-19
Identities = 65/239 (27%), Positives = 107/239 (44%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
++ TGS+D T KLW + T TGH ++S++ SG + S D V V+D T
Sbjct: 191 VVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDAST 250
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ TL +E+ F +L + G + LWD + +ATL+ E
Sbjct: 251 GRKVHTLIGHCAEISSALFS-WDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDE---- 305
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
+L + G+ IA S DGT V++ T K + LEGH + + ++P
Sbjct: 306 ---------ILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQ 356
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
R+L +SD T ++D + + + GH + S + G + TGS D + ++W
Sbjct: 357 GNRLLTGSSDKT-ARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 186 (70.5 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 45/155 (29%), Positives = 79/155 (50%)
Query: 163 SVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS-PVDPRVLFSASD 221
+VA + G GS D T V+D + LH LEGH V ++ ++ P ++ + D
Sbjct: 97 NVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFD 156
Query: 222 DTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS 280
T ++ AE GK T GH + ++ + +P + TGS D T KLWD+ + +
Sbjct: 157 KT-CKLWSAETGKCYHT-FRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVT 214
Query: 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
+T H ++ +SF G R+++ S D ++ +++ S
Sbjct: 215 LTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDAS 249
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 44/155 (28%), Positives = 74/155 (47%)
Query: 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90
+L+LTGS+D+T LW + T TGH ++ +G + A+AS D RV++
Sbjct: 274 SLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNAT 333
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
T I LE E+ ++ F+P+G L + G + ++WD T + L EG
Sbjct: 334 TRKCITKLEGHEGEISKISFNPQGNRL-LTGSSDKTARIWDVQTGQCLQVL-----EG-- 385
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
TD+ + S A++ G + GS D + ++
Sbjct: 386 HTDE------IFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 118 (46.6 bits), Expect = 0.00027, P = 0.00027
Identities = 54/212 (25%), Positives = 93/212 (43%)
Query: 108 MQFDPKGTTLAVAGGG---SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFV-LS 163
+++ P G L GG + S+ L + + + TL + + ++P +S K V L
Sbjct: 8 LRYYPPGIMLEYEKGGELKTKSIDLLELSPSTDVNTL-VGEIQKVEPLITASRTKQVRLL 66
Query: 164 VAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 223
V + R C D +F V RA H +P+ ++ + + + D T
Sbjct: 67 VQRLQEKLRQHC---DHNFYLFKVLRA--------HILPLTNVALNKAGSCFITGSYDRT 115
Query: 224 HVHMYD-AEGKSLVTAMSGHASWVLSVDAS-PDGAAITTGSSDRTVKLWDLNMRAAMQSM 281
++D A G+ L T + GH + V ++ + P G I TGS D+T KLW +
Sbjct: 116 -CKVWDTASGEELHT-LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTF 173
Query: 282 TNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
HT ++ +SF P V + S D + L++
Sbjct: 174 RGHTAEIVCLSFNPQSTVVATGSMDTTAKLWD 205
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 327 (120.2 bits), Expect = 7.1e-28, P = 7.1e-28
Identities = 99/282 (35%), Positives = 137/282 (48%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVA-AHPSGIIAASASLDSFVRVFDVD 90
LL + S D TVK+W L+R GH V SV +H S +IA S S D VR+++
Sbjct: 319 LLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIA-SGSNDRTVRIWETT 377
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
T T E V + F LA A G +VK+WDT T +L L EG
Sbjct: 378 TGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGG-NVKIWDTRTGSLQNVL-----EG-- 429
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
D V SV++SPD R +A S D T+ ++ LEGH VRS+V+S
Sbjct: 430 -HDDC-----VNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSH 483
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
D R++ SASDD V ++D L + H +WV SV S D + + S D TVK+W
Sbjct: 484 -DSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIW 542
Query: 271 DLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
D + ++ H D+V VSF P + S SDD ++ ++
Sbjct: 543 DTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW 584
Score = 308 (113.5 bits), Expect = 7.4e-26, P = 7.4e-26
Identities = 91/283 (32%), Positives = 136/283 (48%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVA-AHPSGIIAASASLDSFVRVFDVD 90
LL + S D TVK+W L+ T GH V SV +H S ++A SAS D V+++D
Sbjct: 277 LLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLA-SASDDGTVKIWDTA 335
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
T L+ V + F +A +G +V++W+T T L T
Sbjct: 336 TGTLQRMLKGHNDSVRSVVFSHDSRLIA-SGSNDRTVRIWETTTGLLRHTFE-------- 386
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
D S V++V+++ D RR+A S G + ++D + LEGH V S+ +SP
Sbjct: 387 --DHEDS---VMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSP 441
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
D R+L SASDD V ++ A SL + GH WV SV S D I + S D TVK+W
Sbjct: 442 -DSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIW 500
Query: 271 DLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
D ++ +H + V V F + S SDD ++ +++
Sbjct: 501 DTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWD 543
Score = 283 (104.7 bits), Expect = 3.4e-23, P = 3.4e-23
Identities = 90/283 (31%), Positives = 131/283 (46%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVA-AHPSGIIAASASLDSFVRVFDVD 90
L+ +GS D TV++W L T H V++V+ AH S +A SAS V+++D
Sbjct: 361 LIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLA-SASDGGNVKIWDTR 419
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
T + LE V + F P LA A +VK+W AT +L TL EG
Sbjct: 420 TGSLQNVLEGHDDCVNSVSFSPDSRLLASASD-DRTVKIWHAATGSLQRTL-----EG-- 471
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
+V SV +S D R IA S D T+ ++D ++LE H VRS+V+S
Sbjct: 472 ------HNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSH 525
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
D R+L SASDD V ++D SL + GH V SV SPD + + S D TVK+W
Sbjct: 526 -DSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW 584
Query: 271 DLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ ++F + S DD ++ +++
Sbjct: 585 YAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWD 627
Score = 279 (103.3 bits), Expect = 9.0e-23, P = 9.0e-23
Identities = 87/257 (33%), Positives = 125/257 (48%)
Query: 58 GHCLGVVSVA-AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTT 116
GH V SV+ +H S ++A SAS D V+++D T+ TLE V + F
Sbjct: 261 GHDRAVGSVSFSHDSRLLA-SASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRL 319
Query: 117 LAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACG 176
LA A +VK+WDTAT TL LK + S V SV +S D R IA G
Sbjct: 320 LASASD-DGTVKIWDTAT----GTLQ----RMLKGHNDS-----VRSVVFSHDSRLIASG 365
Query: 177 SMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLV 236
S D T+ +++ T H E H V ++ ++ D R L SASD +V ++D SL
Sbjct: 366 SNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAH-DSRRLASASDGGNVKIWDTRTGSLQ 424
Query: 237 TAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPL 296
+ GH V SV SPD + + S DRTVK+W + +++ H D V V F
Sbjct: 425 NVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHD 484
Query: 297 GGRVVSVSDDKSISLYE 313
+ S SDD ++ +++
Sbjct: 485 SRLIASASDDMTVKIWD 501
Score = 240 (89.5 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 66/187 (35%), Positives = 97/187 (51%)
Query: 133 ATWNL----IATLSIPRPEGL-KPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 187
A WN+ A L + L P + V SV++S D R +A S DGT+ ++D
Sbjct: 233 ALWNISGIKCAPLQVYASALLFSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWD- 291
Query: 188 TRAKFLHH-LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWV 246
T FL + LEGH V+S+V+S D R+L SASDD V ++D +L + GH V
Sbjct: 292 TATSFLQNTLEGHNEWVKSVVFSH-DSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSV 350
Query: 247 LSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDD 306
SV S D I +GS+DRTV++W+ + +H D V VSF R+ S SD
Sbjct: 351 RSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDG 410
Query: 307 KSISLYE 313
++ +++
Sbjct: 411 GNVKIWD 417
Score = 227 (85.0 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 74/242 (30%), Positives = 110/242 (45%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L + S VK+W L+ GH V SV+ P + ASAS D V+++ T
Sbjct: 404 LASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATG 463
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ TLE V + F +A A +VK+WDTAT +P L+
Sbjct: 464 SLQRTLEGHNDWVRSVVFSHDSRLIASASD-DMTVKIWDTAT--------VPLQNNLESH 514
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
D +V SV +S D R +A S D T+ ++D + LEGH V S+ +SP D
Sbjct: 515 DN-----WVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSP-D 568
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
R+L SASDD V ++ A ++ G +S+ S + + D TVK+WD+
Sbjct: 569 SRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDM 628
Query: 273 NM 274
+
Sbjct: 629 EI 630
Score = 203 (76.5 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 74/205 (36%), Positives = 100/205 (48%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVA-AHPSGIIAASASLDSFVRVFDVD 90
LL + S D TVK+W L+RT GH V SV +H S +IA SAS D V+++D
Sbjct: 445 LLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIA-SASDDMTVKIWDTA 503
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
T LE+ + V + F LA A +VK+WDTAT +L TL EG
Sbjct: 504 TVPLQNNLESHDNWVRSVVFSHDSRLLASASD-DMTVKIWDTATGSLENTL-----EG-- 555
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
D+ V SV++SPD R +A S DGT+ ++ H +G SL +S
Sbjct: 556 HDDR------VNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSH 609
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSL 235
+L SA DD V ++D E SL
Sbjct: 610 TS-NLLASAMDDGTVKIWDMEIYSL 633
Score = 121 (47.7 bits), Expect = 0.00086, P = 0.00086
Identities = 44/147 (29%), Positives = 62/147 (42%)
Query: 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHP 70
N W + V + ++R LL + S D TVK+W LE T GH V SV+ P
Sbjct: 510 NLESHDNWVRSVVFSHDSR--LLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSP 567
Query: 71 SGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLW 130
+ ASAS D V+++ T T + S + F LA A +VK+W
Sbjct: 568 DSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMD-DGTVKIW 626
Query: 131 DTATWNLIATLSIPRPEGLKPTDKSSS 157
D ++L T + DKS S
Sbjct: 627 DMEIYSLRHTFDLDHEIQRIQFDKSMS 653
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 312 (114.9 bits), Expect = 3.0e-27, P = 3.0e-27
Identities = 90/245 (36%), Positives = 127/245 (51%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL + S D TVK+W + L+ T GH V SV + ASAS DS V+++D T
Sbjct: 310 LLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLASAS-DSTVKIWDTGT 368
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ TLE V + F LA A S +VK+WDT T +L TL EG
Sbjct: 369 GSLQHTLEGHRDWVRSVIFSHDSQLLASASDDS-TVKIWDTGTGSLQHTL-----EG--- 419
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
+ +V SV +S D + +A S D T+ ++D H LEGH VRS+++S
Sbjct: 420 -----HRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSH- 473
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
D R+L SASDD V ++D E S + GH+S V SV S D + + S+D+TV++WD
Sbjct: 474 DSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWD 533
Query: 272 LNMRA 276
+ R+
Sbjct: 534 IEARS 538
Score = 310 (114.2 bits), Expect = 4.9e-27, P = 4.9e-27
Identities = 85/256 (33%), Positives = 131/256 (51%)
Query: 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
GH V+SV+ + ASAS D V+++D +T + TLE V + F L
Sbjct: 294 GHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLL 353
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS 177
A A ++VK+WDT T +L TL EG + +V SV +S D + +A S
Sbjct: 354 ASAS--DSTVKIWDTGTGSLQHTL-----EG--------HRDWVRSVIFSHDSQLLASAS 398
Query: 178 MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT 237
D T+ ++D H LEGH VRS+++S D ++L SASDD+ V ++D SL
Sbjct: 399 DDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSH-DSQLLASASDDSTVKIWDTGTGSLQH 457
Query: 238 AMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLG 297
+ GH WV SV S D + + S DRTV++WD + ++ H+ V VSF
Sbjct: 458 TLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDS 517
Query: 298 GRVVSVSDDKSISLYE 313
+ S S+D+++ +++
Sbjct: 518 RLLASASNDQTVRIWD 533
Score = 257 (95.5 bits), Expect = 2.9e-21, P = 2.9e-21
Identities = 72/219 (32%), Positives = 106/219 (48%)
Query: 95 IATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDK 154
+ LE + V + + LA A +VK+WDT T +L TL EG
Sbjct: 289 LQALEGHEAAVLSVSYSHDSRLLASASD-DRTVKIWDTETGSLQHTL-----EG------ 336
Query: 155 SSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPR 214
V SV +S D R +A S D T+ ++D H LEGH VRS+++S D +
Sbjct: 337 --HSDLVRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSH-DSQ 392
Query: 215 VLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
+L SASDD+ V ++D SL + GH WV SV S D + + S D TVK+WD
Sbjct: 393 LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT 452
Query: 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ ++ H D V V F + S SDD+++ +++
Sbjct: 453 GSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWD 491
Score = 238 (88.8 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 76/204 (37%), Positives = 105/204 (51%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVA-AHPSGIIAASASLDSFVRVFDVDT 91
LL + D TVK+W L+ T GH V SV +H S ++A SAS DS V+++D T
Sbjct: 352 LLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLA-SASDDSTVKIWDTGT 410
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ TLE V + F LA A S +VK+WDT T +L TL EG
Sbjct: 411 GSLQHTLEGHRDWVRSVIFSHDSQLLASASDDS-TVKIWDTGTGSLQHTL-----EG--- 461
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
+ +V SV +S D R +A S D T+ ++D + H LEGH V S+ +S
Sbjct: 462 -----HRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSH- 515
Query: 212 DPRVLFSASDDTHVHMYDAEGKSL 235
D R+L SAS+D V ++D E +SL
Sbjct: 516 DSRLLASASNDQTVRIWDIEARSL 539
Score = 152 (58.6 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 58/165 (35%), Positives = 81/165 (49%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVA-AHPSGIIAASASLDSFVRVFDVD 90
LL + S D TVK+W L+ T GH V SV +H S ++A SAS DS V+++D
Sbjct: 393 LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLA-SASDDSTVKIWDTG 451
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
T + TLE V + F LA A +V++WDT + TL EG
Sbjct: 452 TGSLQHTLEGHRDWVRSVIFSHDSRLLASASD-DRTVRIWDTEKGSHKHTL-----EG-- 503
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHH 195
SS V SV++S D R +A S D T+ ++D+ A+ L H
Sbjct: 504 ---HSS---LVTSVSFSHDSRLLASASNDQTVRIWDI-EARSLQH 541
Score = 127 (49.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 42/127 (33%), Positives = 60/127 (47%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVA-AHPSGIIAASASLDSFVRVFDVD 90
LL + S D TVK+W L+ T GH V SV +H S ++A SAS D VR++D +
Sbjct: 435 LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLA-SASDDRTVRIWDTE 493
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
+ TLE S V + F LA A +V++WD +L T +
Sbjct: 494 KGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQ-TVRIWDIEARSLQHTFDLDATIEAM 552
Query: 151 PTDKSSS 157
DK++S
Sbjct: 553 RFDKATS 559
>UNIPROTKB|H0YMF9 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AC090607 HGNC:HGNC:30300
ChiTaRS:WDR61 ProteinModelPortal:H0YMF9 SMR:H0YMF9
Ensembl:ENST00000559848 Bgee:H0YMF9 Uniprot:H0YMF9
Length = 189
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 69/191 (36%), Positives = 110/191 (57%)
Query: 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLW--RPDDMQLERTNTGHCLGVVSVA 67
E AH++++W+V W + ++TGSLD+ VK+W R + + L+ + GH LGVVSV
Sbjct: 12 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVD 71
Query: 68 AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
+ IAAS+SLD+ +R++D++ I +++A P + W + F P LA G+
Sbjct: 72 ISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLAT---GTHVG 128
Query: 128 KLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 187
K+ N+ S G K + KF+LS+A+SPDG+ +A G++DG I++FD+
Sbjct: 129 KV------NIFGVES-----GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 188 TRAKFLHHLEG 198
K LH LEG
Sbjct: 178 ATGKLLHTLEG 188
Score = 116 (45.9 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 40/161 (24%), Positives = 75/161 (46%)
Query: 161 VLSVAWSPDGRR----IACGSMDGTISVFDVT--RAKFLHHLEGHFMPVRSLVYSPVDPR 214
+ SVAW + + + GS+D + V+ R LEGH + V S+ S P
Sbjct: 19 IWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLP- 77
Query: 215 VLFSASDDTHVHMYDAE-GKSLVTAMSGHA-SWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ S+S D H+ ++D E GK + + +G +W L+ SPD + TG+ V ++ +
Sbjct: 78 IAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAF--SPDSQYLATGTHVGKVNIFGV 135
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
S+ + +++ P G + S + D I++++
Sbjct: 136 ESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 298 (110.0 bits), Expect = 4.3e-26, P = 4.3e-26
Identities = 83/266 (31%), Positives = 129/266 (48%)
Query: 48 DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQ 107
+D LER GH + SV PSG A+AS D+F+ +++ A V
Sbjct: 6 EDPVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTS 65
Query: 108 MQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS 167
+QF P G LA A +V+LW IP G K ++ + V SV +S
Sbjct: 66 VQFSPLGNLLASASR-DRTVRLW------------IPDKRG-KSSEFKAHTAPVRSVDFS 111
Query: 168 PDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 227
DG+ +A S D +I V+++ R +FL+ L H VR +SP D R++ S S+D + +
Sbjct: 112 ADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKI 170
Query: 228 YDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQ 287
+D K V S + VD +P+G I + SD TVK+WD+ + +Q H+
Sbjct: 171 WDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGG 230
Query: 288 VWGVSFRPLGGRVVSVSDDKSISLYE 313
V VSF P G +++ S D ++ + +
Sbjct: 231 VNCVSFHPSGNYIITASSDGTLKILD 256
Score = 209 (78.6 bits), Expect = 9.5e-15, P = 9.5e-15
Identities = 71/262 (27%), Positives = 114/262 (43%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H++ V +V + P LL + S D TV+LW PD H V SV G
Sbjct: 59 HKDVVTSVQFSPLGN----LLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADG 114
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
A+AS D ++V+++ + +L V +F P G L V+ ++K+WDT
Sbjct: 115 QFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWDT 173
Query: 133 ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF 192
+ S S F V ++P+G IA D T+ ++D+ K
Sbjct: 174 TNKQCVNNFS-------------DSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKL 220
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA-EGKSLVTAMSGHASWVLSVDA 251
L H + H V + + P ++ ++SD T + + D EG+ L+ + GH V +V
Sbjct: 221 LQHYQVHSGGVNCVSFHPSGNYIITASSDGT-LKILDLLEGR-LIYTLQGHTGPVFTVSF 278
Query: 252 SPDGAAITTGSSDRTVKLWDLN 273
S G ++G +D V LW N
Sbjct: 279 SKGGELFSSGGADTQVLLWRTN 300
Score = 204 (76.9 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 77/270 (28%), Positives = 113/270 (41%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L T S D + LW GH V SV P G + ASAS D VR++ D
Sbjct: 33 LATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKR 92
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ +A + V + F G LA A S+K+W+ + +L + T
Sbjct: 93 GKSSEFKAHTAPVRSVDFSADGQFLATASEDK-SIKVWNMYRQRFLYSL-------YRHT 144
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
KF SPDGR I S D TI ++D T + +++ + ++P
Sbjct: 145 HWVRCAKF------SPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNG 198
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ + SD T V ++D L+ H+ V V P G I T SSD T+K+ DL
Sbjct: 199 TCIASAGSDHT-VKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDL 257
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVS 302
+ ++ HT V+ VSF GG + S
Sbjct: 258 LEGRLIYTLQGHTGPVFTVSFSK-GGELFS 286
Score = 125 (49.1 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 39/126 (30%), Positives = 55/126 (43%)
Query: 7 KSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV 66
K N +SV +V + GS D TVK+W +L + H GV V
Sbjct: 176 KQCVNNFSDSVGFANFVDFNPNGTCIASAGS-DHTVKIWDIRVNKLLQHYQVHSGGVNCV 234
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
+ HPSG +AS D +++ D+ I TL+ V+ + F KG L +GG
Sbjct: 235 SFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS-KGGELFSSGGADTQ 293
Query: 127 VKLWDT 132
V LW T
Sbjct: 294 VLLWRT 299
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 70/280 (25%), Positives = 132/280 (47%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+ TGS D+T KLW + + T GH +V ++ +P + A+ S+D+ +++D+ +
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSG 209
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ TL +E+ + F+ G + + G +V +W+ T + TL +
Sbjct: 210 EEVFTLTGHSAEIISLSFNTSGNRI-ITGSFDHTVTVWEADTGRKVYTL-------IGHC 261
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
+ SS F W D I GSMD T ++D K + L GH + +
Sbjct: 262 AEISSAVF----NW--DCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTG 315
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+++ +AS D ++ A + VT + GH + + +P G + TGSSD+T ++WD
Sbjct: 316 -KLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDA 374
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+Q + HTD+++ +F G +++ S D + ++
Sbjct: 375 QTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 275 (101.9 bits), Expect = 6.7e-24, P = 6.7e-24
Identities = 74/281 (26%), Positives = 134/281 (47%)
Query: 34 LTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAH-PSGIIAASASLDSFVRVFDVDTN 92
+TGS D T KLW + T GH V ++A + P G A+ S D +++ V+T
Sbjct: 108 ITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETG 167
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
T +E+ + F+P+ +TL G + KLWD + + TL T
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQ-STLVATGSMDTTAKLWDIQSGEEVFTL----------T 216
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
S+ ++S++++ G RI GS D T++V++ + ++ L GH + S V++ D
Sbjct: 217 GHSAE---IISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFN-WD 272
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
++ + S D ++DA V ++GH +L G I T S+D T +++
Sbjct: 273 CSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSA 332
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
R + + H ++ +SF P G R+++ S DK+ +++
Sbjct: 333 ATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWD 373
Score = 246 (91.7 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 68/239 (28%), Positives = 109/239 (45%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
L+ TGS+D T KLW + T TGH ++S++ + SG + S D V V++ DT
Sbjct: 191 LVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADT 250
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ TL +E+ F+ +L + G + KLWD +ATL+ E
Sbjct: 251 GRKVYTLIGHCAEISSAVFN-WDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDE---- 305
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
+L + G+ IA S DGT +F + + LEGH + + ++P
Sbjct: 306 ---------ILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQ 356
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
R+L +SD T ++DA+ + + GH + S + G I TGS D T ++W
Sbjct: 357 GNRLLTGSSDKT-ARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 215 (80.7 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 64/255 (25%), Positives = 117/255 (45%)
Query: 59 HCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFD-PKGTTL 117
H L + +VA + SG + S D +++D + + TLE + V+ + F+ P G +
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKI 150
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS 177
A G + KLW T T E ++ ++++P +A GS
Sbjct: 151 AT-GSFDKTCKLWSVETGKCYHTFRGHTAE-------------IVCLSFNPQSTLVATGS 196
Query: 178 MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT 237
MD T ++D+ + + L GH + SL ++ R++ + D T V +++A+ V
Sbjct: 197 MDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHT-VTVWEADTGRKVY 255
Query: 238 AMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLG 297
+ GH + + S + D + I TGS D+T KLWD + ++T H D++ F G
Sbjct: 256 TLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTG 315
Query: 298 GRVVSVSDDKSISLY 312
+ + S D + ++
Sbjct: 316 KLIATASADGTARIF 330
Score = 188 (71.2 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 43/153 (28%), Positives = 79/153 (51%)
Query: 163 SVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS-PVDPRVLFSASD 221
+VA + G GS D T ++D + LH LEGH V ++ ++ P ++ + D
Sbjct: 97 NVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFD 156
Query: 222 DTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS 280
T ++ E GK T GH + ++ + +P + TGS D T KLWD+ + +
Sbjct: 157 KT-CKLWSVETGKCYHT-FRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFT 214
Query: 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+T H+ ++ +SF G R+++ S D +++++E
Sbjct: 215 LTGHSAEIISLSFNTSGNRIITGSFDHTVTVWE 247
Score = 164 (62.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 46/155 (29%), Positives = 75/155 (48%)
Query: 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90
+L+LTGS+D+T KLW + + T TGH ++ +G + A+AS D R+F
Sbjct: 274 SLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAA 333
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
T + LE E+ ++ F+P+G L + G + ++WD T + L EG
Sbjct: 334 TRECVTKLEGHEGEISKISFNPQGNRL-LTGSSDKTARIWDAQTGQCLQVL-----EG-- 385
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
TD+ + S A++ G I GS D T ++
Sbjct: 386 HTDE------IFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 33/120 (27%), Positives = 57/120 (47%)
Query: 196 LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHASWVLSVDAS-P 253
L H +P+ ++ + + S D ++D A G+ L T + GH + V ++ + P
Sbjct: 88 LRAHILPLTNVALNK-SGSCFITGSYDRTCKLWDTASGEELHT-LEGHRNVVYAIAFNNP 145
Query: 254 DGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
G I TGS D+T KLW + + HT ++ +SF P V + S D + L++
Sbjct: 146 YGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 205
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 70/280 (25%), Positives = 130/280 (46%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+ TGS D+T KLW + + T GH +V ++ +P + A+ S+D+ +++D+
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNG 209
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ TL +E+ + F+ G + + G +V +WD T + L +
Sbjct: 210 EEVYTLRGHSAEIISLSFNTSGDRI-ITGSFDHTVVVWDADTGRKVNIL-------IGHC 261
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
+ SS F W D I GSMD T ++D T K + L GH + +
Sbjct: 262 AEISSASF----NW--DCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTG 315
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+++ +AS D ++ A + + + GH + + +P G + TGSSD+T ++WD
Sbjct: 316 -KLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDA 374
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+Q + HTD+++ +F G V++ S D + ++
Sbjct: 375 QTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 262 (97.3 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 75/283 (26%), Positives = 132/283 (46%)
Query: 34 LTGSLDETVKLWRPDDMQLERTNT--GHCLGVVSVAAH-PSGIIAASASLDSFVRVFDVD 90
+TGS D T KLW D E NT GH V ++A + P G A+ S D +++ V+
Sbjct: 108 ITGSYDRTCKLW--DTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVE 165
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
T T +E+ + F+P+ +TL G + KLWD + TL
Sbjct: 166 TGKCYHTFRGHTAEIVCLSFNPQ-STLVATGSMDTTAKLWDIQNGEEVYTL--------- 215
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
+ S + ++S++++ G RI GS D T+ V+D + ++ L GH + S ++
Sbjct: 216 ---RGHSAE-IISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFN- 270
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
D ++ + S D ++DA V ++GH +L G I T S+D T +++
Sbjct: 271 WDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIF 330
Query: 271 DLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
R + + H ++ +SF P G +++ S DK+ +++
Sbjct: 331 SAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWD 373
Score = 239 (89.2 bits), Expect = 9.5e-20, P = 9.5e-20
Identities = 66/239 (27%), Positives = 107/239 (44%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
L+ TGS+D T KLW + + T GH ++S++ + SG + S D V V+D DT
Sbjct: 191 LVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADT 250
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ L +E+ F+ +L + G + KLWD +ATL+ E
Sbjct: 251 GRKVNILIGHCAEISSASFN-WDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDE---- 305
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
+L + G+ IA S DGT +F K + LEGH + + ++P
Sbjct: 306 ---------ILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQ 356
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
+L +SD T ++DA+ + + GH + S + G + TGS D T ++W
Sbjct: 357 GNHLLTGSSDKT-ARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 238 (88.8 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 75/300 (25%), Positives = 132/300 (44%)
Query: 14 EESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGI 73
EE A + A+ T LL L E + L + H L + +VA + SG
Sbjct: 46 EEIQKAEPLLTASRTEQVKLLIQRLQEKLGQNSNHTFYLFKVLKAHILPLTNVALNKSGS 105
Query: 74 IAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFD-PKGTTLAVAGGGSASVKLWDT 132
+ S D +++D + + TLE + V+ + F+ P G +A G + KLW
Sbjct: 106 CFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIAT-GSFDKTCKLWSV 164
Query: 133 ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF 192
T T E ++ ++++P +A GSMD T ++D+ +
Sbjct: 165 ETGKCYHTFRGHTAE-------------IVCLSFNPQSTLVATGSMDTTAKLWDIQNGEE 211
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS 252
++ L GH + SL ++ R++ + D T V ++DA+ V + GH + + S +
Sbjct: 212 VYTLRGHSAEIISLSFNTSGDRIITGSFDHTVV-VWDADTGRKVNILIGHCAEISSASFN 270
Query: 253 PDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
D + I TGS D+T KLWD + ++T H D++ F G + + S D + ++
Sbjct: 271 WDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIF 330
Score = 171 (65.3 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 47/155 (30%), Positives = 76/155 (49%)
Query: 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90
+L+LTGS+D+T KLW + + T TGH ++ +G + A+AS D R+F
Sbjct: 274 SLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAA 333
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
T IA LE E+ ++ F+P+G L + G + ++WD T + L EG
Sbjct: 334 TRKCIAKLEGHEGEISKISFNPQGNHL-LTGSSDKTARIWDAQTGQCLQVL-----EG-- 385
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
TD+ + S A++ G + GS D T ++
Sbjct: 386 HTDE------IFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 169 (64.5 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 40/153 (26%), Positives = 77/153 (50%)
Query: 163 SVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS-PVDPRVLFSASD 221
+VA + G GS D T ++D + L+ LEGH V ++ ++ P ++ + D
Sbjct: 97 NVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFD 156
Query: 222 DTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS 280
T ++ E GK T GH + ++ + +P + TGS D T KLWD+ + +
Sbjct: 157 KT-CKLWSVETGKCYHT-FRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYT 214
Query: 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ H+ ++ +SF G R+++ S D ++ +++
Sbjct: 215 LRGHSAEIISLSFNTSGDRIITGSFDHTVVVWD 247
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 33/120 (27%), Positives = 58/120 (48%)
Query: 196 LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHASWVLSVDAS-P 253
L+ H +P+ ++ + + S D ++D A G+ L T + GH + V ++ + P
Sbjct: 88 LKAHILPLTNVALNK-SGSCFITGSYDRTCKLWDTASGEELNT-LEGHRNVVYAIAFNNP 145
Query: 254 DGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
G I TGS D+T KLW + + HT ++ +SF P V + S D + L++
Sbjct: 146 YGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 205
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 80/266 (30%), Positives = 125/266 (46%)
Query: 48 DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQ 107
+D LER GH + SV + AS S+DS ++++ + L V
Sbjct: 8 EDPSLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMC 67
Query: 108 MQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS 167
+QF P G +A +G +V LW +P +G K+ + V SV +S
Sbjct: 68 VQFSPSGHLVA-SGSRDKTVCLW------------VPSVKGESTVFKAHTAT-VRSVHFS 113
Query: 168 PDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 227
DG+ + S D TI V+ V R KFL L H VR +SP D R++ SASDD V +
Sbjct: 114 SDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSP-DGRLIASASDDKTVKL 172
Query: 228 YDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQ 287
+D + + + H + V+ P G I +D+TVK+WD+ M +Q HT
Sbjct: 173 WDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAA 232
Query: 288 VWGVSFRPLGGRVVSVSDDKSISLYE 313
V +SF P G +++ S+D ++ + +
Sbjct: 233 VNSLSFHPSGNYLITASNDSTLKILD 258
Score = 201 (75.8 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 73/247 (29%), Positives = 103/247 (41%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
L+ +GS D+TV LW P H V SV G +AS D ++V+ V
Sbjct: 76 LVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHR 135
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ +L + V +F P G +A A +VKLWD + I + G
Sbjct: 136 QKFLFSLSQHINWVRCARFSPDGRLIASASDDK-TVKLWDKTSRECIHSFC---EHG--- 188
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
F V + P G IA D T+ V+DV + L H + H V SL + P
Sbjct: 189 -------GFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHP- 240
Query: 212 DPRVLFSASDDTHVHMYDA-EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
L +AS+D+ + + D EG+ L T + GH V S G +G SD V +W
Sbjct: 241 SGNYLITASNDSTLKILDLLEGRLLYT-LHGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Query: 271 DLNMRAA 277
N AA
Sbjct: 300 KTNFSAA 306
Score = 198 (74.8 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 67/281 (23%), Positives = 114/281 (40%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L +GS+D +K+W GH V+ V PSG + AS S D V ++
Sbjct: 35 LASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVK 94
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+A + V + F G +L A ++K+W + +LS
Sbjct: 95 GESTVFKAHTATVRSVHFSSDGQSLVTASDDK-TIKVWTVHRQKFLFSLS---------- 143
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
+V +SPDGR IA S D T+ ++D T + +H H + + P
Sbjct: 144 ---QHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSG 200
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ + +D T V ++D L+ H + V S+ P G + T S+D T+K+ DL
Sbjct: 201 TCIAAAGTDKT-VKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDL 259
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ ++ H V+F G S D+ + +++
Sbjct: 260 LEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWK 300
Score = 126 (49.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 37/124 (29%), Positives = 54/124 (43%)
Query: 20 VTWVPATETRP--ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAAS 77
+ WV P L+ + S D+TVKLW + + H V HPSG A+
Sbjct: 146 INWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAA 205
Query: 78 ASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNL 137
A D V+V+DV N + + + V + F P G L A S ++K+ D L
Sbjct: 206 AGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDS-TLKILDLLEGRL 264
Query: 138 IATL 141
+ TL
Sbjct: 265 LYTL 268
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 90/307 (29%), Positives = 149/307 (48%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H +S+ + + P + L T S D+TVK+W D M ERT TGH LGV +A
Sbjct: 86 HTKSISSAKFSPCGK----YLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
SAS D +++F++ T+ TL+ + V+ F+P+ ++L V+G SV++WD
Sbjct: 142 RCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQ-SSLVVSGSFDESVRIWDV 200
Query: 133 ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF 192
T I TL P P V +V+++ DG IA GS DG + ++D +
Sbjct: 201 KTGMCIKTL----PAHSDP---------VSAVSFNRDGSLIASGSYDGLVRIWDTANGQC 247
Query: 193 LHHL-EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGH--ASWVLS 248
+ L + PV + +SP +L S D T + ++D ++GK+L +GH + + +
Sbjct: 248 IKTLVDDENPPVAFVKFSPNGKYILASNLDST-LKLWDFSKGKTL-KQYTGHENSKYCIF 305
Query: 249 VDASPDGAA-ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVS--VSD 305
+ S G I +GS D + +W+L R +Q + HT V P+ + S +
Sbjct: 306 ANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEP 365
Query: 306 DKSISLY 312
D I ++
Sbjct: 366 DNKIHIW 372
Score = 190 (71.9 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 40/155 (25%), Positives = 80/155 (51%)
Query: 159 KFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFS 218
K + S +SP G+ + S D T+ ++++ L GH + V + +S D R + S
Sbjct: 88 KSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSS-DSRCVVS 146
Query: 219 ASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAM 278
ASDD + +++ + + GH ++V + +P + + +GS D +V++WD+ +
Sbjct: 147 ASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCI 206
Query: 279 QSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+++ H+D V VSF G + S S D + +++
Sbjct: 207 KTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Score = 173 (66.0 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 59/262 (22%), Positives = 113/262 (43%)
Query: 55 TNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKG 114
T GH + S P G ++S D V+++++D TL V + +
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWS-SD 140
Query: 115 TTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIA 174
+ V+ ++K+++ T + TL +V ++P +
Sbjct: 141 SRCVVSASDDKTLKIFEIVTSRMTKTLK-------------GHNNYVFCCNFNPQSSLVV 187
Query: 175 CGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGK 233
GS D ++ ++DV + L H PV ++ ++ D ++ S S D V ++D A G+
Sbjct: 188 SGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNR-DGSLIASGSYDGLVRIWDTANGQ 246
Query: 234 SLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGV-- 291
+ T + V V SP+G I + D T+KLWD + ++ T H + + +
Sbjct: 247 CIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFA 306
Query: 292 SFRPLGGR-VVSVSDDKSISLY 312
+F GG+ ++S S+D I ++
Sbjct: 307 NFSVTGGKWIISGSEDCKIYIW 328
Score = 131 (51.2 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 31/123 (25%), Positives = 63/123 (51%)
Query: 191 KFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVD 250
K + LEGH + S +SP + L ++S D V +++ + ++GH V +
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCG-KYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 251 ASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSIS 310
S D + + S D+T+K++++ +++ H + V+ +F P VVS S D+S+
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 311 LYE 313
+++
Sbjct: 197 IWD 199
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 90/307 (29%), Positives = 149/307 (48%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H +S+ + + P + L T S D+TVK+W D M ERT TGH LGV +A
Sbjct: 86 HTKSISSAKFSPCGK----YLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
SAS D +++F++ T+ TL+ + V+ F+P+ ++L V+G SV++WD
Sbjct: 142 RCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQ-SSLVVSGSFDESVRIWDV 200
Query: 133 ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF 192
T I TL P P V +V+++ DG IA GS DG + ++D +
Sbjct: 201 KTGMCIKTL----PAHSDP---------VSAVSFNRDGSLIASGSYDGLVRIWDTANGQC 247
Query: 193 LHHL-EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGH--ASWVLS 248
+ L + PV + +SP +L S D T + ++D ++GK+L +GH + + +
Sbjct: 248 IKTLVDDENPPVAFVKFSPNGKYILASNLDST-LKLWDFSKGKTL-KQYTGHENSKYCIF 305
Query: 249 VDASPDGAA-ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVS--VSD 305
+ S G I +GS D + +W+L R +Q + HT V P+ + S +
Sbjct: 306 ANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEP 365
Query: 306 DKSISLY 312
D I ++
Sbjct: 366 DNKIHIW 372
Score = 190 (71.9 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 40/155 (25%), Positives = 80/155 (51%)
Query: 159 KFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFS 218
K + S +SP G+ + S D T+ ++++ L GH + V + +S D R + S
Sbjct: 88 KSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSS-DSRCVVS 146
Query: 219 ASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAM 278
ASDD + +++ + + GH ++V + +P + + +GS D +V++WD+ +
Sbjct: 147 ASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCI 206
Query: 279 QSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+++ H+D V VSF G + S S D + +++
Sbjct: 207 KTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Score = 173 (66.0 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 59/262 (22%), Positives = 113/262 (43%)
Query: 55 TNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKG 114
T GH + S P G ++S D V+++++D TL V + +
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWS-SD 140
Query: 115 TTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIA 174
+ V+ ++K+++ T + TL +V ++P +
Sbjct: 141 SRCVVSASDDKTLKIFEIVTSRMTKTLK-------------GHNNYVFCCNFNPQSSLVV 187
Query: 175 CGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGK 233
GS D ++ ++DV + L H PV ++ ++ D ++ S S D V ++D A G+
Sbjct: 188 SGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNR-DGSLIASGSYDGLVRIWDTANGQ 246
Query: 234 SLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGV-- 291
+ T + V V SP+G I + D T+KLWD + ++ T H + + +
Sbjct: 247 CIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFA 306
Query: 292 SFRPLGGR-VVSVSDDKSISLY 312
+F GG+ ++S S+D I ++
Sbjct: 307 NFSVTGGKWIISGSEDCKIYIW 328
Score = 131 (51.2 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 31/123 (25%), Positives = 63/123 (51%)
Query: 191 KFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVD 250
K + LEGH + S +SP + L ++S D V +++ + ++GH V +
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCG-KYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 251 ASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSIS 310
S D + + S D+T+K++++ +++ H + V+ +F P VVS S D+S+
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 311 LYE 313
+++
Sbjct: 197 IWD 199
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 291 (107.5 bits), Expect = 5.1e-25, P = 5.1e-25
Identities = 79/239 (33%), Positives = 117/239 (48%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L T S D T KLW+ D L+ T GH + VA HPSG + S D R++D++T
Sbjct: 313 LATASADRTAKLWKTDGTLLQ-TFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTG 371
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEG-LKP 151
A + E V+ + F G LA + G + ++WD T I +G +KP
Sbjct: 372 AELLLQEGHSRSVYGIAFQQDGA-LAASCGLDSLARVWDLRTGRSILVF-----QGHIKP 425
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
V SV +SP+G +A G D ++D+ K L+ + H V + Y P
Sbjct: 426 ---------VFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQ 476
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
+ L +AS D V+++ SLV +++GH S V S+D + D + I T S DRT+KLW
Sbjct: 477 EGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
Score = 186 (70.5 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 67/266 (25%), Positives = 116/266 (43%)
Query: 50 MQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDV-DTNASIATLEASPSEVWQM 108
M L+ +N G + + G I A+ SL +++++ +IA L+ +
Sbjct: 245 MALDCSNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDV 304
Query: 109 QFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP 168
F P LA A + KLW T L+ T EG D+ + VA+ P
Sbjct: 305 VFSPVDDCLATASA-DRTAKLWKT-DGTLLQTF-----EG--HLDR------LARVAFHP 349
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
G+ + S D T ++D+ L EGH V + + D + S D+ ++
Sbjct: 350 SGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQ-DGALAASCGLDSLARVW 408
Query: 229 DAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQ 287
D G+S++ GH V SV+ SP+G + +G D ++WDL MR ++ + H +
Sbjct: 409 DLRTGRSILV-FQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANL 467
Query: 288 VWGVSFRPLGGR-VVSVSDDKSISLY 312
V V + P G + + S D ++++
Sbjct: 468 VSQVKYEPQEGYFLATASYDMKVNIW 493
Score = 155 (59.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 40/150 (26%), Positives = 74/150 (49%)
Query: 165 AWSPDGRRIACGSMDGTISVFDVTRA-KFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 223
++S DG+ +A S+ G ++++ + + L+ H +V+SPVD L +AS D
Sbjct: 262 SFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDD-CLATASADR 320
Query: 224 HVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN 283
++ +G +L+ GH + V P G + T S D+T +LWD+N A +
Sbjct: 321 TAKLWKTDG-TLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEG 379
Query: 284 HTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
H+ V+G++F+ G S D +++
Sbjct: 380 HSRSVYGIAFQQDGALAASCGLDSLARVWD 409
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 36/156 (23%), Positives = 64/156 (41%)
Query: 158 KKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLF 217
K+ V +SP +A S D T ++ T L EGH + + + P + L
Sbjct: 298 KERATDVVFSPVDDCLATASADRTAKLWK-TDGTLLQTFEGHLDRLARVAFHP-SGKYLG 355
Query: 218 SASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA 277
+ S D ++D + + GH+ V + DGA + D ++WDL +
Sbjct: 356 TTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRS 415
Query: 278 MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ H V+ V+F P G + S +D +++
Sbjct: 416 ILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWD 451
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 91/318 (28%), Positives = 152/318 (47%)
Query: 4 AGLKSVEN--AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCL 61
AG K + H +S+ AV + P + L T S D+TVK+W D+ ERT TGH L
Sbjct: 67 AGYKLISTIEGHTKSISAVKFSPCGK----FLGTSSADKTVKIWNMSDLSCERTLTGHKL 122
Query: 62 GVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAG 121
GV A +AS D +++++V T TL+ + V+ F+P+ ++L V+G
Sbjct: 123 GVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQ-SSLVVSG 181
Query: 122 GGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGT 181
SV++WD T + TL P P V +V+++ DG I GS DG
Sbjct: 182 SFDESVRIWDVRTGMCVKTL----PAHSDP---------VSAVSFNRDGSLITSGSYDGL 228
Query: 182 ISVFDVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAM 239
+ ++D + + L + PV + +SP +L S D+T + ++D +GK+L
Sbjct: 229 VRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNT-LKLWDFGKGKTL-KQY 286
Query: 240 SGHAS--WVLSVDASPDGAA-ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPL 296
GH + + + + S G I +GS D + +W+L + +QS+ HT V P+
Sbjct: 287 QGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPM 346
Query: 297 GGRVVS--VSDDKSISLY 312
+ S + D +I ++
Sbjct: 347 QNMIASGALEPDNTIRIW 364
Score = 193 (73.0 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 39/155 (25%), Positives = 81/155 (52%)
Query: 159 KFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFS 218
K + +V +SP G+ + S D T+ +++++ L GH + V +S D + + +
Sbjct: 80 KSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWS-ADSKSIVT 138
Query: 219 ASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAM 278
ASDD + +Y+ + + GH ++V + +P + + +GS D +V++WD+ +
Sbjct: 139 ASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCV 198
Query: 279 QSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+++ H+D V VSF G + S S D + +++
Sbjct: 199 KTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWD 233
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 25/82 (30%), Positives = 48/82 (58%)
Query: 232 GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGV 291
G L++ + GH + +V SP G + T S+D+TVK+W+++ + +++T H V
Sbjct: 68 GYKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDF 127
Query: 292 SFRPLGGRVVSVSDDKSISLYE 313
++ +V+ SDDK++ +YE
Sbjct: 128 AWSADSKSIVTASDDKTLKIYE 149
>POMBASE|SPBC32F12.02 [details] [associations]
symbol:rec14 "Ski complex subunit Rec14" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0055087 "Ski complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC32F12.02 GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0006402 GO:GO:0007131 EMBL:U39144
PIR:T40226 RefSeq:NP_596145.1 ProteinModelPortal:Q09150
STRING:Q09150 EnsemblFungi:SPBC32F12.02.1 GeneID:2540221
KEGG:spo:SPBC32F12.02 HOGENOM:HOG000208957 KO:K12601 OMA:RNCVATH
OrthoDB:EOG4SJ8PN NextBio:20801353 GO:GO:0055087 Uniprot:Q09150
Length = 302
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 80/308 (25%), Positives = 135/308 (43%)
Query: 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQ---LERTNTGHCLGVVSV 66
ENAH+ ++++ V L + S D +K W D + +E +T H LGV +
Sbjct: 12 ENAHQADIYSLNVVAGN------LWSASGDSKIKKWSIGDAEHSLVEEIDTPHKLGVHHL 65
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNA--SIATLEASPSEVWQMQFDPKGTTLAVAGGGS 124
A + S V V++ +TN + PSE W P G T+A
Sbjct: 66 ATSLDENVVVSCGFGQDVYVWNPETNEFRDLGNNAQHPSECWSSCISPDGQTIAFTSV-D 124
Query: 125 ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISV 184
+ +WD P K ++ + KF L + +SP+GR I G G + +
Sbjct: 125 GRIAVWDN-------------PSDCKISELDTKGKFGLCIDYSPNGRFIVSGHQTGQLFL 171
Query: 185 FDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHAS 244
+ H L GH PVRS+ +SP +L +A D + +YD V + GHA+
Sbjct: 172 ISTETGRLFHVLSGHTSPVRSVAFSP-GSTLLAAAGDSKMITIYDVLSGDQVGQLRGHAA 230
Query: 245 WVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVS 304
W+ +V +P G + + + +K+WD++ + + + +W V++ G +V+ +
Sbjct: 231 WIFAVAFNPVGDLLLSADVEGKIKIWDIDTMECISTQSETDGAIWAVAWYK-NGFIVAGA 289
Query: 305 DDKSISLY 312
D KSI Y
Sbjct: 290 D-KSIRWY 296
Score = 135 (52.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 37/147 (25%), Positives = 67/147 (45%)
Query: 167 SPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVH 226
SPDG+ IA S+DG I+V+D + L+ + YSP + R + S +
Sbjct: 112 SPDGQTIAFTSVDGRIAVWDNPSDCKISELDTKGKFGLCIDYSP-NGRFIVSGHQTGQLF 170
Query: 227 MYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTD 286
+ E L +SGH S V SV SP + + + ++D+ + + H
Sbjct: 171 LISTETGRLFHVLSGHTSPVRSVAFSPGSTLLAAAGDSKMITIYDVLSGDQVGQLRGHAA 230
Query: 287 QVWGVSFRPLGGRVVSVSDDKSISLYE 313
++ V+F P+G ++S + I +++
Sbjct: 231 WIFAVAFNPVGDLLLSADVEGKIKIWD 257
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 286 (105.7 bits), Expect = 9.8e-25, P = 9.8e-25
Identities = 79/267 (29%), Positives = 128/267 (47%)
Query: 47 PDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVW 106
P+D LER GH + SV P+G A+ S D+F+ ++ + A +
Sbjct: 5 PEDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVIT 64
Query: 107 QMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW 166
+QF P G LA A +++LW IP G K ++ + V SV +
Sbjct: 65 SVQFSPLGNLLASASR-DRTIRLW------------IPDKRG-KSSEFKAHTAPVRSVDF 110
Query: 167 SPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVH 226
S DG+ +A S D +I V+++ R +FL+ L H VR +SP D R++ S S+D +
Sbjct: 111 SADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIK 169
Query: 227 MYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTD 286
++D K V S + V +P+G I + SD TVK+WD+ + +Q H+
Sbjct: 170 IWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSG 229
Query: 287 QVWGVSFRPLGGRVVSVSDDKSISLYE 313
V VSF P G +++ S D ++ + +
Sbjct: 230 GVNCVSFHPSGNYLITASSDGTLKILD 256
Score = 216 (81.1 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 73/262 (27%), Positives = 113/262 (43%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H++ + +V + P LL + S D T++LW PD H V SV G
Sbjct: 59 HKDVITSVQFSPLGN----LLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADG 114
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
ASAS D ++V+++ + +L V +F P G L V+ ++K+WDT
Sbjct: 115 QFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWDT 173
Query: 133 ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF 192
+ S D FV A++P+G IA D T+ ++D+ K
Sbjct: 174 TNKQCVNNFS----------DFVGFANFV---AFNPNGTCIASAGSDHTVKIWDIRVNKL 220
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA-EGKSLVTAMSGHASWVLSVDA 251
L H + H V + + P L +AS D + + D EG+ L+ + GH V +V
Sbjct: 221 LQHYQVHSGGVNCVSFHP-SGNYLITASSDGTLKILDLLEGR-LIYTLQGHTGPVFTVSF 278
Query: 252 SPDGAAITTGSSDRTVKLWDLN 273
S G T+G +D V LW N
Sbjct: 279 SKGGELFTSGGADAQVLLWRTN 300
Score = 206 (77.6 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 76/280 (27%), Positives = 116/280 (41%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L TGS D + LW GH + SV P G + ASAS D +R++ D
Sbjct: 33 LATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKR 92
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ +A + V + F G LA A S+K+W+ + +L + T
Sbjct: 93 GKSSEFKAHTAPVRSVDFSADGQFLASASEDK-SIKVWNMYRQRFLYSL-------YRHT 144
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
KF SPDGR I S D TI ++D T + +++ + ++P
Sbjct: 145 HWVRCAKF------SPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNG 198
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ + SD T V ++D L+ H+ V V P G + T SSD T+K+ DL
Sbjct: 199 TCIASAGSDHT-VKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDL 257
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+ ++ HT V+ VSF G S D + L+
Sbjct: 258 LEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 286 (105.7 bits), Expect = 9.8e-25, P = 9.8e-25
Identities = 80/266 (30%), Positives = 129/266 (48%)
Query: 48 DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQ 107
+D LER GH + S+ P+G A+AS D+F+ +++ +A V
Sbjct: 6 EDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTS 65
Query: 108 MQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS 167
+QF P G LA A +V+LW IP G K ++ + V SV +S
Sbjct: 66 VQFSPHGNLLASASR-DRTVRLW------------IPDKRG-KFSEFKAHTAPVRSVDFS 111
Query: 168 PDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 227
DG+ +A S D +I V+ + R +FL+ L H VR +SP D R++ S S+D + +
Sbjct: 112 ADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKI 170
Query: 228 YDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQ 287
+D K V S + VD +P G I + SD+TVK+WD+ + +Q H+
Sbjct: 171 WDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 230
Query: 288 VWGVSFRPLGGRVVSVSDDKSISLYE 313
V +SF P G +++ S D ++ + +
Sbjct: 231 VNCISFHPSGNYLITASSDGTLKILD 256
Score = 205 (77.2 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 74/262 (28%), Positives = 109/262 (41%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H++ V +V + P LL + S D TV+LW PD H V SV G
Sbjct: 59 HKDVVTSVQFSPHGN----LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADG 114
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
A+AS D ++V+ + + +L V +F P G L V+ ++K+WDT
Sbjct: 115 QFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWDT 173
Query: 133 ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF 192
+ S S F V ++P G IA D T+ V+DV K
Sbjct: 174 TNKQCVNNFS-------------DSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKL 220
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA-EGKSLVTAMSGHASWVLSVDA 251
L H + H V + + P L +AS D + + D EG+ L+ + GH V +V
Sbjct: 221 LQHYQVHSGGVNCISFHP-SGNYLITASSDGTLKILDLLEGR-LIYTLQGHTGPVFTVSF 278
Query: 252 SPDGAAITTGSSDRTVKLWDLN 273
S G +G +D V LW N
Sbjct: 279 SKGGELFASGGADTQVLLWRTN 300
Score = 205 (77.2 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 76/280 (27%), Positives = 114/280 (40%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L T S D + LW GH V SV P G + ASAS D VR++ D
Sbjct: 33 LATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKR 92
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ +A + V + F G LA A S+K+W + +L + T
Sbjct: 93 GKFSEFKAHTAPVRSVDFSADGQFLATASEDK-SIKVWSMYRQRFLYSL-------YRHT 144
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
KF SPDGR I S D TI ++D T + +++ + ++P
Sbjct: 145 HWVRCAKF------SPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSG 198
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ + SD T V ++D L+ H+ V + P G + T SSD T+K+ DL
Sbjct: 199 TCIASAGSDQT-VKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDL 257
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+ ++ HT V+ VSF G S D + L+
Sbjct: 258 LEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 90/315 (28%), Positives = 153/315 (48%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS 65
LK H ++V AV + P E L + S D+ +K+W D + E+T +GH LG+
Sbjct: 64 LKFTLAGHTKAVSAVKFSPNGEW----LASSSADKLIKIWGAYDGKFEKTISGHKLGISD 119
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
VA + S S D ++V+++ T S+ TL+ + V+ F+P+ + L V+G
Sbjct: 120 VAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDE 178
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
SV++WD T + TL P P V +V ++ DG I S DG ++
Sbjct: 179 SVRIWDVRTGKCLKTL----PAHSDP---------VSAVHFNRDGSLIVSSSYDGLCRIW 225
Query: 186 DVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHA 243
D + L L + PV + +SP +L + D+T + ++D ++GK L T +GH
Sbjct: 226 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCLKT-YTGHK 283
Query: 244 S--WVLSVDASPDGAA-ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRV 300
+ + + + S G I +GS D V +W+L + +Q + HTD V + P +
Sbjct: 284 NEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENII 343
Query: 301 VSVS--DDKSISLYE 313
S + +DK+I L++
Sbjct: 344 ASAALENDKTIKLWK 358
Score = 207 (77.9 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 53/169 (31%), Positives = 91/169 (53%)
Query: 139 ATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEG 198
++LS+ LK T + K V +V +SP+G +A S D I ++ KF + G
Sbjct: 54 SSLSVKPNYTLKFT-LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 112
Query: 199 HFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHASWVLSVDASPDGAA 257
H + + + +S D R+L S SDD + +++ + GKSL T + GH+++V + +P
Sbjct: 113 HKLGISDVAWSS-DSRLLVSGSDDKTLKVWELSTGKSLKT-LKGHSNYVFCCNFNPQSNL 170
Query: 258 ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDD 306
I +GS D +V++WD+ ++++ H+D V V F G +VS S D
Sbjct: 171 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 219
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 89/315 (28%), Positives = 153/315 (48%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS 65
LK H ++V +V + P E L + S D+ +K+W D + E+T +GH LG+
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEW----LASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
VA + SAS D ++++DV + + TL+ + V+ F+P+ + L V+G
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDE 151
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
SV++WD T + TL P P V +V ++ DG I S DG ++
Sbjct: 152 SVRIWDVKTGKCLKTL----PAHSDP---------VSAVHFNRDGSLIVSSSYDGLCRIW 198
Query: 186 DVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHA 243
D + L L + PV + +SP +L + D+T + ++D ++GK L T +GH
Sbjct: 199 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCLKT-YTGHK 256
Query: 244 S--WVLSVDASPDGAA-ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRV 300
+ + + + S G I +GS D V +W+L + +Q + HTD V + P +
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 316
Query: 301 VSVS--DDKSISLYE 313
S + +DK+I L++
Sbjct: 317 ASAALENDKTIKLWK 331
Score = 209 (78.6 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 57/173 (32%), Positives = 90/173 (52%)
Query: 139 ATLSIPRPE----GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLH 194
AT S P P LK T + K V SV +SP+G +A S D I ++ KF
Sbjct: 23 ATQSKPTPVKPNYALKFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK 81
Query: 195 HLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHASWVLSVDASP 253
+ GH + + + +S D +L SASDD + ++D + GK L T + GH+++V + +P
Sbjct: 82 TISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNP 139
Query: 254 DGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDD 306
I +GS D +V++WD+ ++++ H+D V V F G +VS S D
Sbjct: 140 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Score = 182 (69.1 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 58/221 (26%), Positives = 100/221 (45%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
TL V ++F P G LA + +K+W T+S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKFEKTIS-------------G 85
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVL 216
K + VAWS D + S D T+ ++DV+ K L L+GH V ++P ++
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLI 144
Query: 217 FSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMR 275
S S D V ++D + GK L T + H+ V +V + DG+ I + S D ++WD
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKT-LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 276 AAMQSMTNHTDQ-VWGVSFRPLGGRVVSVSDDKSISLYEYS 315
++++ + + V V F P G +++ + D ++ L++YS
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 244
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 89/315 (28%), Positives = 153/315 (48%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS 65
LK H ++V +V + P E L + S D+ +K+W D + E+T +GH LG+
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEW----LASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
VA + SAS D ++++DV + + TL+ + V+ F+P+ + L V+G
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDE 151
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
SV++WD T + TL P P V +V ++ DG I S DG ++
Sbjct: 152 SVRIWDVKTGKCLKTL----PAHSDP---------VSAVHFNRDGSLIVSSSYDGLCRIW 198
Query: 186 DVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHA 243
D + L L + PV + +SP +L + D+T + ++D ++GK L T +GH
Sbjct: 199 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCLKT-YTGHK 256
Query: 244 S--WVLSVDASPDGAA-ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRV 300
+ + + + S G I +GS D V +W+L + +Q + HTD V + P +
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 316
Query: 301 VSVS--DDKSISLYE 313
S + +DK+I L++
Sbjct: 317 ASAALENDKTIKLWK 331
Score = 209 (78.6 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 57/173 (32%), Positives = 90/173 (52%)
Query: 139 ATLSIPRPE----GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLH 194
AT S P P LK T + K V SV +SP+G +A S D I ++ KF
Sbjct: 23 ATQSKPTPVKPNYALKFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK 81
Query: 195 HLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHASWVLSVDASP 253
+ GH + + + +S D +L SASDD + ++D + GK L T + GH+++V + +P
Sbjct: 82 TISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNP 139
Query: 254 DGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDD 306
I +GS D +V++WD+ ++++ H+D V V F G +VS S D
Sbjct: 140 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Score = 182 (69.1 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 58/221 (26%), Positives = 100/221 (45%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
TL V ++F P G LA + +K+W T+S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKFEKTIS-------------G 85
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVL 216
K + VAWS D + S D T+ ++DV+ K L L+GH V ++P ++
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLI 144
Query: 217 FSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMR 275
S S D V ++D + GK L T + H+ V +V + DG+ I + S D ++WD
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKT-LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 276 AAMQSMTNHTDQ-VWGVSFRPLGGRVVSVSDDKSISLYEYS 315
++++ + + V V F P G +++ + D ++ L++YS
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 244
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 89/315 (28%), Positives = 153/315 (48%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS 65
LK H ++V +V + P E L + S D+ +K+W D + E+T +GH LG+
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEW----LASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
VA + SAS D ++++DV + + TL+ + V+ F+P+ + L V+G
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDE 151
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
SV++WD T + TL P P V +V ++ DG I S DG ++
Sbjct: 152 SVRIWDVKTGKCLKTL----PAHSDP---------VSAVHFNRDGSLIVSSSYDGLCRIW 198
Query: 186 DVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHA 243
D + L L + PV + +SP +L + D+T + ++D ++GK L T +GH
Sbjct: 199 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCLKT-YTGHK 256
Query: 244 S--WVLSVDASPDGAA-ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRV 300
+ + + + S G I +GS D V +W+L + +Q + HTD V + P +
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 316
Query: 301 VSVS--DDKSISLYE 313
S + +DK+I L++
Sbjct: 317 ASAALENDKTIKLWK 331
Score = 209 (78.6 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 57/173 (32%), Positives = 90/173 (52%)
Query: 139 ATLSIPRPE----GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLH 194
AT S P P LK T + K V SV +SP+G +A S D I ++ KF
Sbjct: 23 ATQSKPTPVKPNYALKFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK 81
Query: 195 HLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHASWVLSVDASP 253
+ GH + + + +S D +L SASDD + ++D + GK L T + GH+++V + +P
Sbjct: 82 TISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNP 139
Query: 254 DGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDD 306
I +GS D +V++WD+ ++++ H+D V V F G +VS S D
Sbjct: 140 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Score = 182 (69.1 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 58/221 (26%), Positives = 100/221 (45%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
TL V ++F P G LA + +K+W T+S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKFEKTIS-------------G 85
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVL 216
K + VAWS D + S D T+ ++DV+ K L L+GH V ++P ++
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLI 144
Query: 217 FSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMR 275
S S D V ++D + GK L T + H+ V +V + DG+ I + S D ++WD
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKT-LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 276 AAMQSMTNHTDQ-VWGVSFRPLGGRVVSVSDDKSISLYEYS 315
++++ + + V V F P G +++ + D ++ L++YS
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 244
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 89/315 (28%), Positives = 153/315 (48%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS 65
LK H ++V +V + P E L + S D+ +K+W D + E+T +GH LG+
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEW----LASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
VA + SAS D ++++DV + + TL+ + V+ F+P+ + L V+G
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDE 151
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
SV++WD T + TL P P V +V ++ DG I S DG ++
Sbjct: 152 SVRIWDVKTGKCLKTL----PAHSDP---------VSAVHFNRDGSLIVSSSYDGLCRIW 198
Query: 186 DVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHA 243
D + L L + PV + +SP +L + D+T + ++D ++GK L T +GH
Sbjct: 199 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCLKT-YTGHK 256
Query: 244 S--WVLSVDASPDGAA-ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRV 300
+ + + + S G I +GS D V +W+L + +Q + HTD V + P +
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 316
Query: 301 VSVS--DDKSISLYE 313
S + +DK+I L++
Sbjct: 317 ASAALENDKTIKLWK 331
Score = 209 (78.6 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 57/173 (32%), Positives = 90/173 (52%)
Query: 139 ATLSIPRPE----GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLH 194
AT S P P LK T + K V SV +SP+G +A S D I ++ KF
Sbjct: 23 ATQSKPTPVKPNYALKFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK 81
Query: 195 HLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHASWVLSVDASP 253
+ GH + + + +S D +L SASDD + ++D + GK L T + GH+++V + +P
Sbjct: 82 TISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNP 139
Query: 254 DGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDD 306
I +GS D +V++WD+ ++++ H+D V V F G +VS S D
Sbjct: 140 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Score = 182 (69.1 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 58/221 (26%), Positives = 100/221 (45%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
TL V ++F P G LA + +K+W T+S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKFEKTIS-------------G 85
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVL 216
K + VAWS D + S D T+ ++DV+ K L L+GH V ++P ++
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLI 144
Query: 217 FSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMR 275
S S D V ++D + GK L T + H+ V +V + DG+ I + S D ++WD
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKT-LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 276 AAMQSMTNHTDQ-VWGVSFRPLGGRVVSVSDDKSISLYEYS 315
++++ + + V V F P G +++ + D ++ L++YS
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 244
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 89/315 (28%), Positives = 153/315 (48%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS 65
LK H ++V +V + P E L + S D+ +K+W D + E+T +GH LG+
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEW----LASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
VA + SAS D ++++DV + + TL+ + V+ F+P+ + L V+G
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDE 151
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
SV++WD T + TL P P V +V ++ DG I S DG ++
Sbjct: 152 SVRIWDVKTGKCLKTL----PAHSDP---------VSAVHFNRDGSLIVSSSYDGLCRIW 198
Query: 186 DVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHA 243
D + L L + PV + +SP +L + D+T + ++D ++GK L T +GH
Sbjct: 199 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCLKT-YTGHK 256
Query: 244 S--WVLSVDASPDGAA-ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRV 300
+ + + + S G I +GS D V +W+L + +Q + HTD V + P +
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 316
Query: 301 VSVS--DDKSISLYE 313
S + +DK+I L++
Sbjct: 317 ASAALENDKTIKLWK 331
Score = 209 (78.6 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 57/173 (32%), Positives = 90/173 (52%)
Query: 139 ATLSIPRPE----GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLH 194
AT S P P LK T + K V SV +SP+G +A S D I ++ KF
Sbjct: 23 ATQSKPTPVKPNYALKFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK 81
Query: 195 HLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHASWVLSVDASP 253
+ GH + + + +S D +L SASDD + ++D + GK L T + GH+++V + +P
Sbjct: 82 TISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNP 139
Query: 254 DGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDD 306
I +GS D +V++WD+ ++++ H+D V V F G +VS S D
Sbjct: 140 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Score = 182 (69.1 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 58/221 (26%), Positives = 100/221 (45%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
TL V ++F P G LA + +K+W T+S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKFEKTIS-------------G 85
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVL 216
K + VAWS D + S D T+ ++DV+ K L L+GH V ++P ++
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLI 144
Query: 217 FSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMR 275
S S D V ++D + GK L T + H+ V +V + DG+ I + S D ++WD
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKT-LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 276 AAMQSMTNHTDQ-VWGVSFRPLGGRVVSVSDDKSISLYEYS 315
++++ + + V V F P G +++ + D ++ L++YS
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 244
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 89/315 (28%), Positives = 153/315 (48%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS 65
LK H ++V +V + P E L + S D+ +K+W D + E+T +GH LG+
Sbjct: 11 LKFTLAGHTKAVSSVKFSPNGEW----LASSSADKLIKIWGAYDGKFEKTISGHKLGISD 66
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
VA + SAS D ++++DV + + TL+ + V+ F+P+ + L V+G
Sbjct: 67 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDE 125
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
SV++WD T + TL P P V +V ++ DG I S DG ++
Sbjct: 126 SVRIWDVKTGKCLKTL----PAHSDP---------VSAVHFNRDGSLIVSSSYDGLCRIW 172
Query: 186 DVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHA 243
D + L L + PV + +SP +L + D+T + ++D ++GK L T +GH
Sbjct: 173 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCLKT-YTGHK 230
Query: 244 S--WVLSVDASPDGAA-ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRV 300
+ + + + S G I +GS D V +W+L + +Q + HTD V + P +
Sbjct: 231 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 290
Query: 301 VSVS--DDKSISLYE 313
S + +DK+I L++
Sbjct: 291 ASAALENDKTIKLWK 305
Score = 182 (69.1 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 58/221 (26%), Positives = 100/221 (45%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
TL V ++F P G LA + +K+W T+S
Sbjct: 14 TLAGHTKAVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKFEKTIS-------------G 59
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVL 216
K + VAWS D + S D T+ ++DV+ K L L+GH V ++P ++
Sbjct: 60 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLI 118
Query: 217 FSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMR 275
S S D V ++D + GK L T + H+ V +V + DG+ I + S D ++WD
Sbjct: 119 VSGSFDESVRIWDVKTGKCLKT-LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 177
Query: 276 AAMQSMTNHTDQ-VWGVSFRPLGGRVVSVSDDKSISLYEYS 315
++++ + + V V F P G +++ + D ++ L++YS
Sbjct: 178 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 218
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 79/267 (29%), Positives = 121/267 (45%)
Query: 47 PDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVW 106
P+D LER GH + SV + AS S+DS + V+ + + V
Sbjct: 6 PEDPSLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVT 65
Query: 107 QMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW 166
+ F P G LA +G +V++W IP +G ++ + V SV +
Sbjct: 66 CVNFSPSGHLLA-SGSRDKTVRIW------------IPNVKGESTVFRAHTAT-VRSVHF 111
Query: 167 SPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVH 226
DG+ + S D T+ V+ R KFL L H VR +SP D R++ SASDD V
Sbjct: 112 CSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSP-DGRLIVSASDDKTVK 170
Query: 227 MYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTD 286
++D + V + H +V VD P G I S D TVK+WD+ +Q H+
Sbjct: 171 LWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSA 230
Query: 287 QVWGVSFRPLGGRVVSVSDDKSISLYE 313
V +SF P G +++ S D ++ + +
Sbjct: 231 AVNALSFHPSGNYLLTASSDSTLKILD 257
Score = 209 (78.6 bits), Expect = 6.0e-15, P = 6.0e-15
Identities = 72/243 (29%), Positives = 105/243 (43%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL +GS D+TV++W P+ H V SV G +AS D V+V+
Sbjct: 75 LLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHR 134
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ +L + V +F P G L V+ +VKLWD + + + G
Sbjct: 135 QKFLFSLSQHINWVRCARFSPDGR-LIVSASDDKTVKLWDKTSRECVHSYC---EHG--- 187
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
FV V + P G IA SMD T+ V+DV + L H + H V +L + P
Sbjct: 188 -------GFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP- 239
Query: 212 DPRVLFSASDDTHVHMYDA-EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
L +AS D+ + + D EG+ L T + GH +V S G +G SD V +W
Sbjct: 240 SGNYLLTASSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Query: 271 DLN 273
N
Sbjct: 299 KSN 301
Score = 201 (75.8 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 69/281 (24%), Positives = 116/281 (41%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L +GS+D + +W GH V V PSG + AS S D VR++ +
Sbjct: 34 LASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVK 93
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
A + V + F G +L A +VK+W T + +LS
Sbjct: 94 GESTVFRAHTATVRSVHFCSDGQSLVTASDDK-TVKVWSTHRQKFLFSLS---------- 142
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
+V +SPDGR I S D T+ ++D T + +H H V + + P
Sbjct: 143 ---QHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ ++ D+T V ++D L+ H++ V ++ P G + T SSD T+K+ DL
Sbjct: 200 TCIAAASMDNT-VKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDL 258
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ ++ H V+F G S D+ + +++
Sbjct: 259 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 142 (55.0 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 39/124 (31%), Positives = 60/124 (48%)
Query: 20 VTWVPATETRP--ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAAS 77
+ WV P L+++ S D+TVKLW + + H V V HPSG A+
Sbjct: 145 INWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAA 204
Query: 78 ASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNL 137
AS+D+ V+V+DV T+ + + + V + F P G L A S ++K+ D L
Sbjct: 205 ASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDS-TLKILDLMEGRL 263
Query: 138 IATL 141
+ TL
Sbjct: 264 LYTL 267
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 280 (103.6 bits), Expect = 3.4e-24, P = 3.4e-24
Identities = 80/266 (30%), Positives = 128/266 (48%)
Query: 48 DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQ 107
+D LER GH + S+ P+G A+AS D+F+ +++ +A V
Sbjct: 6 EDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTS 65
Query: 108 MQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS 167
+QF P G LA A +V+LW IP G K ++ + V SV +S
Sbjct: 66 VQFSPHGNLLASASR-DRTVRLW------------IPDKRG-KFSEFKAHTAPVRSVDFS 111
Query: 168 PDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 227
DG+ +A S D +I V+ + R +FL+ L H VR +SP D R++ S S+D + +
Sbjct: 112 ADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKI 170
Query: 228 YDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQ 287
+D K V S + VD +P G I + SD+TVK+WD+ + +Q H+
Sbjct: 171 WDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 230
Query: 288 VWGVSFRPLGGRVVSVSDDKSISLYE 313
V +SF P +V+ S D ++ + +
Sbjct: 231 VNCISFHPSDNYLVTASSDGTLKILD 256
Score = 210 (79.0 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 75/262 (28%), Positives = 110/262 (41%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H++ V +V + P LL + S D TV+LW PD H V SV G
Sbjct: 59 HKDVVTSVQFSPHGN----LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADG 114
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
A+AS D ++V+ + + +L V +F P G L V+ ++K+WDT
Sbjct: 115 QFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWDT 173
Query: 133 ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF 192
+ S S F V ++P G IA D T+ V+DV K
Sbjct: 174 TNKQCVNNFS-------------DSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKL 220
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA-EGKSLVTAMSGHASWVLSVDA 251
L H + H V + + P D L +AS D + + D EG+ L+ + GH V +V
Sbjct: 221 LQHYQVHSGGVNCISFHPSD-NYLVTASSDGTLKILDLLEGR-LIYTLQGHTGPVFTVSF 278
Query: 252 SPDGAAITTGSSDRTVKLWDLN 273
S G +G +D V LW N
Sbjct: 279 SKGGELFASGGADTQVLLWRTN 300
Score = 199 (75.1 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 75/280 (26%), Positives = 113/280 (40%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L T S D + LW GH V SV P G + ASAS D VR++ D
Sbjct: 33 LATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKR 92
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ +A + V + F G LA A S+K+W + +L + T
Sbjct: 93 GKFSEFKAHTAPVRSVDFSADGQFLATASEDK-SIKVWSMYRQRFLYSL-------YRHT 144
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
KF SPDGR I S D TI ++D T + +++ + ++P
Sbjct: 145 HWVRCAKF------SPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSG 198
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ + SD T V ++D L+ H+ V + P + T SSD T+K+ DL
Sbjct: 199 TCIASAGSDQT-VKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDL 257
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+ ++ HT V+ VSF G S D + L+
Sbjct: 258 LEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 284 (105.0 bits), Expect = 3.4e-24, P = 3.4e-24
Identities = 80/261 (30%), Positives = 121/261 (46%)
Query: 61 LGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVA 120
L + SV P G A+ + D V+V+D+ T T +++ + + G + V+
Sbjct: 328 LYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFI-VS 386
Query: 121 GGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG 180
G G K+WD TL ++ K V SVA SPDGR +A GS+D
Sbjct: 387 GSGDKKAKIWDIEKGKCAFTLG---------NEEVGPKNGVTSVAMSPDGRLVAAGSLDN 437
Query: 181 TISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG---KSLVT 237
+ ++D FL EGH V S+ +SP D + L S S D + ++D G +S
Sbjct: 438 IVRLWDAQTGYFLERYEGHLDSVYSVAFSP-DGKSLASGSLDKSLKLWDLSGSRSRSRCR 496
Query: 238 A-MSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPL 296
A +GH +VLSV SPDG+ + +GS DR+V+ WD + H + V V+ P
Sbjct: 497 ATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPK 556
Query: 297 G---GRVVSVSDDKSISLYEY 314
G + S D L++Y
Sbjct: 557 NNSHGVFATGSGDFRSRLWKY 577
Score = 247 (92.0 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 77/233 (33%), Positives = 109/233 (46%)
Query: 89 VDTNASIATLE--ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRP 146
V TN +I L S V + F G LA G + S +++D T +
Sbjct: 266 VQTNLNIDLLHNLQHNSVVCCVNFSNDGKYLAT--GCNRSAQIYDVDTGKKVHAFV---D 320
Query: 147 EGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSL 206
E K D ++ SV +SPDG +A G+ D T+ V+D+ K H GH + + SL
Sbjct: 321 ESEKDGDL-----YIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSL 375
Query: 207 VYSPVDPRVLFSASDDTHVHMYDAE-GKSLVTAMS---GHASWVLSVDASPDGAAITTGS 262
YS D R + S S D ++D E GK T + G + V SV SPDG + GS
Sbjct: 376 DYSS-DGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGS 434
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
D V+LWD ++ H D V+ V+F P G + S S DKS+ L++ S
Sbjct: 435 LDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLS 487
Score = 229 (85.7 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 77/249 (30%), Positives = 114/249 (45%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L TG+ D+TVK+W +++ T GH L + S+ G S S D +++D++
Sbjct: 342 LATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKG 401
Query: 93 ASIATL---EASPSE-VWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEG 148
TL E P V + P G +A AG V+LWD T + R EG
Sbjct: 402 KCAFTLGNEEVGPKNGVTSVAMSPDGRLVA-AGSLDNIVRLWDAQTGYFLE-----RYEG 455
Query: 149 LKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT----RAKFLHHLEGHFMPVR 204
D V SVA+SPDG+ +A GS+D ++ ++D++ R++ GH V
Sbjct: 456 --HLDS------VYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVL 507
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDG---AAITTG 261
S+ +SP D L S S D V +D + + GH + V+SV SP TG
Sbjct: 508 SVAFSP-DGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATG 566
Query: 262 SSDRTVKLW 270
S D +LW
Sbjct: 567 SGDFRSRLW 575
Score = 125 (49.1 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 38/105 (36%), Positives = 51/105 (48%)
Query: 32 LLLTGSLDETVKLWRPDDMQ-LERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90
L+ GSLD V+LW LER GH V SVA P G AS SLD ++++D+
Sbjct: 429 LVAAGSLDNIVRLWDAQTGYFLERYE-GHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLS 487
Query: 91 TNASI----ATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWD 131
+ S AT V + F P G+ L ++G SV+ WD
Sbjct: 488 GSRSRSRCRATFNGHKDFVLSVAFSPDGSWL-ISGSKDRSVQFWD 531
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 74/260 (28%), Positives = 128/260 (49%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
HE + V + +++ R +++ S D+T+KLW + L +T GH V +P
Sbjct: 70 HENGISDVAF--SSDAR--FIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQS 125
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
+ S S D VR++DV T + L A V + F+ G+ L V+ ++WD+
Sbjct: 126 NMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGS-LIVSSSYDGLCRIWDS 184
Query: 133 ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF 192
T + + TL D++ FV +SP+G+ I G++D T+ +++++ AKF
Sbjct: 185 GTGHCVKTLI---------DDENPPVSFV---RFSPNGKFILVGTLDNTLRLWNISSAKF 232
Query: 193 LHHLEGHFMPVR--SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVD 250
L GH S +S + + + S S+D VHM++ K L+ + GH V++V
Sbjct: 233 LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVA 292
Query: 251 ASPDGAAITTGSSDRTVKLW 270
P I +GS D+TV++W
Sbjct: 293 CHPTENLIASGSLDKTVRIW 312
Score = 220 (82.5 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 76/269 (28%), Positives = 128/269 (47%)
Query: 54 RTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT-NASIA--TLEASPSE--VWQM 108
+T T H V SV G + ASAS D +R + ++T N IA E + E + +
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 109 QFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP 168
F + V+ ++KLWD T +LI TL + T+ + V ++P
Sbjct: 78 AFSSDARFI-VSASDDKTLKLWDVETGSLIKTL-------IGHTN------YAFCVNFNP 123
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
I GS D T+ ++DVT K L L H PV ++ ++ D ++ S+S D ++
Sbjct: 124 QSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNR-DGSLIVSSSYDGLCRIW 182
Query: 229 DA-EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQ 287
D+ G + T + V V SP+G I G+ D T++LW+++ +++ T H +
Sbjct: 183 DSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNA 242
Query: 288 VWGVS--FRPLGG-RVVSVSDDKSISLYE 313
+ +S F G R+VS S+D + ++E
Sbjct: 243 QYCISSAFSVTNGKRIVSGSEDNCVHMWE 271
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 274 (101.5 bits), Expect = 7.1e-24, P = 7.1e-24
Identities = 79/267 (29%), Positives = 118/267 (44%)
Query: 47 PDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVW 106
P+D LER GH V SV + AS S+DS + V+ + V
Sbjct: 6 PEDPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVT 65
Query: 107 QMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW 166
+ F P G LA +G +V++W +P +G ++ + V SV +
Sbjct: 66 CVNFSPSGHLLA-SGSRDKTVRIW------------VPNVKGESTVFRAHTAT-VRSVHF 111
Query: 167 SPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVH 226
DG+ S D T+ V+ R KFL L H VR +SP D R++ SASDD V
Sbjct: 112 CSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVK 170
Query: 227 MYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTD 286
++D + V + H +V VD P G I D TVK+WD+ +Q H+
Sbjct: 171 LWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSA 230
Query: 287 QVWGVSFRPLGGRVVSVSDDKSISLYE 313
V +SF P G +V+ S D ++ + +
Sbjct: 231 AVNALSFHPSGNYLVTASSDSTLKILD 257
Score = 203 (76.5 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 71/243 (29%), Positives = 104/243 (42%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL +GS D+TV++W P+ H V SV G +AS D V+V+
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHR 134
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ +L + V +F P G L V+ +VKLWD + + + G
Sbjct: 135 QKFLFSLSQHINWVRCAKFSPDGR-LIVSASDDKTVKLWDKTSRECVHSYC---EHG--- 187
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
FV V + P G IA MD T+ V+DV + L H + H V +L + P
Sbjct: 188 -------GFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP- 239
Query: 212 DPRVLFSASDDTHVHMYDA-EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
L +AS D+ + + D EG+ L T + GH +V S G +G SD V +W
Sbjct: 240 SGNYLVTASSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Query: 271 DLN 273
N
Sbjct: 299 KSN 301
Score = 196 (74.1 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 68/281 (24%), Positives = 114/281 (40%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L +GS+D + +W GH V V PSG + AS S D VR++ +
Sbjct: 34 LASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK 93
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
A + V + F G + A +VK+W T + +LS
Sbjct: 94 GESTVFRAHTATVRSVHFCSDGQSFVTASDDK-TVKVWSTHRQKFLFSLS---------- 142
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
+V +SPDGR I S D T+ ++D T + +H H V + + P
Sbjct: 143 ---QHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ + D+T V ++D L+ H++ V ++ P G + T SSD T+K+ DL
Sbjct: 200 TCIAAAGMDNT-VKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDL 258
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ ++ H V+F G S D+ + +++
Sbjct: 259 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 140 (54.3 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 38/124 (30%), Positives = 60/124 (48%)
Query: 20 VTWVPATETRP--ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAAS 77
+ WV + P L+++ S D+TVKLW + + H V V HPSG A+
Sbjct: 145 INWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAA 204
Query: 78 ASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNL 137
A +D+ V+V+DV T+ + + + V + F P G L A S ++K+ D L
Sbjct: 205 AGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS-TLKILDLMEGRL 263
Query: 138 IATL 141
+ TL
Sbjct: 264 LYTL 267
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 277 (102.6 bits), Expect = 9.8e-24, P = 9.8e-24
Identities = 79/266 (29%), Positives = 129/266 (48%)
Query: 48 DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQ 107
+D LER+ GH + S P+ A+AS D+F+ ++ + +A V
Sbjct: 6 EDPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTS 65
Query: 108 MQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS 167
+QF P+G LA A +V+LW + R +G K ++ + V SV +S
Sbjct: 66 LQFSPQGNLLASASR-DRTVRLW-----------VLDR-KG-KSSEFKAHTAPVRSVDFS 111
Query: 168 PDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 227
DG+ + S D +I V+ + R +FL+ L H VR +SP D R++ S S+D + +
Sbjct: 112 ADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKI 170
Query: 228 YDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQ 287
+D K V S + VD +P+G I + SD VK+WD+ M +Q H+
Sbjct: 171 WDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCG 230
Query: 288 VWGVSFRPLGGRVVSVSDDKSISLYE 313
V +SF PLG +V+ S D ++ + +
Sbjct: 231 VNCLSFHPLGNSLVTASSDGTVKMLD 256
Score = 213 (80.0 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 68/243 (27%), Positives = 106/243 (43%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL + S D TV+LW D H V SV G + +AS D ++V+ +
Sbjct: 74 LLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFR 133
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ +L V +F P G L V+ ++K+WDT + S
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWDTTNKQCVNNFS--------- 183
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
S F V ++P+G IA D + ++D+ K L H + H V L + P+
Sbjct: 184 ----DSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPL 239
Query: 212 DPRVLFSASDDTHVHMYDA-EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
++ ++SD T V M D EG+ L+ + GH V +V S DG +T+G +D V +W
Sbjct: 240 GNSLVTASSDGT-VKMLDLIEGR-LIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Query: 271 DLN 273
N
Sbjct: 298 RTN 300
Score = 196 (74.1 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 73/280 (26%), Positives = 116/280 (41%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+ T S D + LW GH V S+ P G + ASAS D VR++ +D
Sbjct: 33 IATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRK 92
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ +A + V + F G L A S+K+W + +L + T
Sbjct: 93 GKSSEFKAHTAPVRSVDFSADGQLLVTASEDK-SIKVWSMFRQRFLYSL-------YRHT 144
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
KF SPDGR I S D TI ++D T + +++ + ++P +
Sbjct: 145 HWVRCAKF------SPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNP-N 197
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ SA D V ++D L+ H+ V + P G ++ T SSD TVK+ DL
Sbjct: 198 GTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDL 257
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+ ++ HT V+ VSF G + S D + ++
Sbjct: 258 IEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 87/314 (27%), Positives = 150/314 (47%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS 65
LK H ++V +V + P E L + S D+ +K+W D + E+T +GH LG+
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEW----LASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
VA + SAS D ++++DV + + TL+ + V+ F+P+ + L V+G
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDE 151
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
SV++WD T + TL P P V +V ++ DG I S DG ++
Sbjct: 152 SVRIWDVKTGKCLKTL----PAHSDP---------VSAVHFNRDGSLIVSSSYDGLCRIW 198
Query: 186 DVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVT-AMSGH 242
D + L L + PV + +SP +L + D+T + ++D ++GK L T +
Sbjct: 199 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCLKTYTCHKN 257
Query: 243 ASWVLSVDASPDGAA-ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301
+ + + S G I +GS D V +W+L + +Q + HTD V + P +
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIA 317
Query: 302 SVS--DDKSISLYE 313
S + +DK+I L++
Sbjct: 318 SAALENDKTIKLWK 331
Score = 182 (69.1 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 58/221 (26%), Positives = 100/221 (45%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
TL V ++F P G LA + +K+W T+S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKFEKTIS-------------G 85
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVL 216
K + VAWS D + S D T+ ++DV+ K L L+GH V ++P ++
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLI 144
Query: 217 FSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMR 275
S S D V ++D + GK L T + H+ V +V + DG+ I + S D ++WD
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKT-LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 276 AAMQSMTNHTDQ-VWGVSFRPLGGRVVSVSDDKSISLYEYS 315
++++ + + V V F P G +++ + D ++ L++YS
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 244
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 274 (101.5 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 79/267 (29%), Positives = 128/267 (47%)
Query: 47 PDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVW 106
P+D LER GH + S P+ A+AS D+F+ ++ + +A V
Sbjct: 5 PEDPILERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVT 64
Query: 107 QMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW 166
+QF P+G LA A +V+LW + R +G K ++ + V SV +
Sbjct: 65 SLQFSPQGNLLASASRDK-TVRLW-----------VLDR-KG-KSSEFKAHTAPVRSVDF 110
Query: 167 SPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVH 226
S DG+ + S D +I V+ + R +FL+ L H VR +SP D R++ S S+D +
Sbjct: 111 SADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIK 169
Query: 227 MYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTD 286
++D K V S + VD SP+G I + SD V++WD+ M +Q H+
Sbjct: 170 IWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSC 229
Query: 287 QVWGVSFRPLGGRVVSVSDDKSISLYE 313
V +SF P G +V+ S D ++ + +
Sbjct: 230 GVNCLSFHPSGNSLVTASSDGTVKILD 256
Score = 201 (75.8 bits), Expect = 9.5e-14, P = 9.5e-14
Identities = 75/283 (26%), Positives = 116/283 (40%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+ T S D + LW GH V S+ P G + ASAS D VR++ +D
Sbjct: 33 IATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRK 92
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ +A + V + F G L A S+K+W + +L + T
Sbjct: 93 GKSSEFKAHTAPVRSVDFSADGQFLVTASEDK-SIKVWSMYRQRFLYSL-------YRHT 144
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
KF SPDGR I S D TI ++D T + +++ + +SP +
Sbjct: 145 HWVRCAKF------SPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSP-N 197
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ SA D V ++D L+ H+ V + P G ++ T SSD TVK+ DL
Sbjct: 198 GTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDL 257
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
+ ++ HT V+ VSF G S D + ++ S
Sbjct: 258 VEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWRTS 300
Score = 200 (75.5 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 66/240 (27%), Positives = 104/240 (43%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL + S D+TV+LW D H V SV G +AS D ++V+ +
Sbjct: 74 LLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYR 133
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ +L V +F P G L V+ ++K+WDT + + S
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWDTTSKQCVNNFS--------- 183
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
S F V +SP+G IA D + ++D+ + L H + H V L + P
Sbjct: 184 ----DSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPS 239
Query: 212 DPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
++ ++SD T V + D EG+ L+ + GH V +V S DG T+G +D V +W
Sbjct: 240 GNSLVTASSDGT-VKILDLVEGR-LIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 63/252 (25%), Positives = 100/252 (39%)
Query: 22 WVPATETRP--ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS-VAAHPSGIIAASA 78
WV + P L+++ S D+T+K+W Q N +G + V P+G ASA
Sbjct: 146 WVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVN-NFSDSVGFANFVDFSPNGTCIASA 204
Query: 79 SLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLI 138
D VR++D+ N + + V + F P G +L A +VK+ D LI
Sbjct: 205 GSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASS-DGTVKILDLVEGRLI 263
Query: 139 ATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEG 198
TL +G T V +V++S DG G D + V+ T +H+ +
Sbjct: 264 YTL-----QG--HTGP------VFTVSFSKDGELFTSGGADAQVLVWR-TSFNQVHYRDP 309
Query: 199 HFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSL---VTAMSGHASWVLSVDASPDG 255
++ L + P +L H H E + + M H+S VD
Sbjct: 310 SKRNLKRL-HLEASPHLLDIYPRTPHGHEDKRETIEINPKLEVMDLHSSSPPVVDVLSFD 368
Query: 256 AAITTGSSDRTV 267
+ T S+ R V
Sbjct: 369 STTVTDSTCRAV 380
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 267 (99.0 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 77/266 (28%), Positives = 118/266 (44%)
Query: 48 DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQ 107
+D LER GH V V + AS S+DS + V+ + + V
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 66
Query: 108 MQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS 167
+ F P G LA +G +V++W +P +G ++ + V SV +
Sbjct: 67 VNFSPSGHLLA-SGSRDKTVRIW------------VPNVKGESTVFRAHTAT-VRSVHFC 112
Query: 168 PDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 227
DG+ S D T+ V+ R KFL L H VR +SP D R++ SASDD V +
Sbjct: 113 SDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKL 171
Query: 228 YDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQ 287
+D + V + H +V VD P G I D TVK+WD+ +Q H+
Sbjct: 172 WDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAA 231
Query: 288 VWGVSFRPLGGRVVSVSDDKSISLYE 313
V G+SF P G +++ S D ++ + +
Sbjct: 232 VNGLSFHPSGNYLITASSDSTLKILD 257
Score = 202 (76.2 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 71/243 (29%), Positives = 104/243 (42%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL +GS D+TV++W P+ H V SV G +AS D V+V+
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHR 134
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ +L + V +F P G L V+ +VKLWD ++ + + G
Sbjct: 135 QKFLFSLSQHINWVRCAKFSPDGR-LIVSASDDKTVKLWDKSSRECVHSYC---EHG--- 187
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
FV V + P G IA MD T+ V+DV + L H + H V L + P
Sbjct: 188 -------GFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHP- 239
Query: 212 DPRVLFSASDDTHVHMYDA-EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
L +AS D+ + + D EG+ L T + GH +V S G +G SD V +W
Sbjct: 240 SGNYLITASSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Query: 271 DLN 273
N
Sbjct: 299 KSN 301
Score = 195 (73.7 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 72/301 (23%), Positives = 123/301 (40%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H ++V V + + T+ L +GS+D + +W TGH V V PSG
Sbjct: 18 HRDAVTCVDF--SINTKQ--LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSG 73
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
+ AS S D VR++ + A + V + F G + A +VK+W T
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK-TVKVWAT 132
Query: 133 ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF 192
+ +LS +V +SPDGR I S D T+ ++D + +
Sbjct: 133 HRQKFLFSLS-------------QHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSREC 179
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS 252
+H H V + + P + + D+T V ++D L+ H++ V +
Sbjct: 180 VHSYCEHGGFVTYVDFHPSGTCIAAAGMDNT-VKVWDVRTHRLLQHYQLHSAAVNGLSFH 238
Query: 253 PDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
P G + T SSD T+K+ DL + ++ H V+F G S D+ + ++
Sbjct: 239 PSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Query: 313 E 313
+
Sbjct: 299 K 299
Score = 186 (70.5 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 48/155 (30%), Positives = 77/155 (49%)
Query: 161 VLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSAS 220
V V +S + +++A GSMD + V+ + + GH V + +SP +L S S
Sbjct: 22 VTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP-SGHLLASGS 80
Query: 221 DDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS 280
D V ++ K T H + V SV DG + T S D+TVK+W + + + S
Sbjct: 81 RDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFS 140
Query: 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
++ H + V F P G +VS SDDK++ L++ S
Sbjct: 141 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS 175
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 84/316 (26%), Positives = 149/316 (47%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS 65
LK H +S+ +V + P + L + S D+T+K+W D + ERT GH G+
Sbjct: 38 LKYTLKGHLKSISSVKFSPDGKW----LASASADKTIKIWGAYDGKFERTLEGHKEGISD 93
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
+A + SAS D ++++DV++ + TL+ V+ + F+P+ + L V+G
Sbjct: 94 IAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQ-SNLIVSGSFDE 152
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
+V++WD T +S +D V V ++ DG + GS DGT+ ++
Sbjct: 153 NVRIWDVNTGECTKMISAH-------SDP------VTGVHFNRDGTLVVSGSYDGTVRIW 199
Query: 186 DVTRAKFLHHLEGHFMPVRSLV-YSPVDPRVLFSASDDT-HVHMYDAEGKSLVTAMSGHA 243
D T + L+ + S V +SP VL D+T + Y+ K L T +GH
Sbjct: 200 DTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKT-YTGHK 258
Query: 244 S---WVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRV 300
+ + S + G I TGS D + +++L R +Q++ H D V V+ P +
Sbjct: 259 NEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENII 318
Query: 301 VS--VSDDKSISLYEY 314
S + D+S+ ++++
Sbjct: 319 ASGALEKDRSVKIWKH 334
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 61/176 (34%), Positives = 94/176 (53%)
Query: 140 TLSIPRPEG--LKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLE 197
T SIP+ LK T K K + SV +SPDG+ +A S D TI ++ KF LE
Sbjct: 27 TESIPQTPNYILKYTLKGHLKS-ISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLE 85
Query: 198 GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAA 257
GH + + +S D +++ SASDD + ++D E +V + GH +V V +P
Sbjct: 86 GHKEGISDIAWSQ-DSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNL 144
Query: 258 ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
I +GS D V++WD+N + ++ H+D V GV F G VVS S D ++ +++
Sbjct: 145 IVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWD 200
Score = 204 (76.9 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 60/220 (27%), Positives = 101/220 (45%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
TL+ + ++F P G LA A ++K+W TL EG
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADK-TIKIWGAYDGKFERTL-----EG-------- 86
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVL 216
K+ + +AWS D + I S D TI ++DV K + L+GH V + ++P ++
Sbjct: 87 HKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNP-QSNLI 145
Query: 217 FSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRA 276
S S D +V ++D +S H+ V V + DG + +GS D TV++WD
Sbjct: 146 VSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQ 205
Query: 277 AMQSM-TNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
+ ++ T +V V F P G V++ + D ++ L+ Y+
Sbjct: 206 LLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYN 245
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 266 (98.7 bits), Expect = 7.9e-23, P = 7.9e-23
Identities = 76/266 (28%), Positives = 122/266 (45%)
Query: 48 DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQ 107
DD LER GH + S+ PSG AS S+D+ V V+++ + V
Sbjct: 6 DDPTLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTC 65
Query: 108 MQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS 167
+QF P LA + +V+LW +P +G ++ + V SV +S
Sbjct: 66 VQFSPSAHLLA-SSSRDKTVRLW------------VPSVKGESVLFRAHTGS-VRSVCFS 111
Query: 168 PDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 227
DG+ + S D +I ++ V R K + L H VR +SP D +++ S SDD V +
Sbjct: 112 ADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSP-DGQLMVSVSDDRTVKL 170
Query: 228 YDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQ 287
+DA + L+ + VD P I T SSD TV++WD+ +Q H+
Sbjct: 171 WDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAA 230
Query: 288 VWGVSFRPLGGRVVSVSDDKSISLYE 313
V +SF P G +++ S D ++ + +
Sbjct: 231 VNALSFHPSGNHLLTASSDSTLKILD 256
Score = 214 (80.4 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 79/265 (29%), Positives = 117/265 (44%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPD---DMQLERTNTGHCLGVVSVAAH 69
H+++V V + P+ LL + S D+TV+LW P + L R +TG V SV
Sbjct: 59 HKDAVTCVQFSPSAH----LLASSSRDKTVRLWVPSVKGESVLFRAHTG---SVRSVCFS 111
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
G +AS D ++++ V I TL + V +F P G L V+ +VKL
Sbjct: 112 ADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQ-LMVSVSDDRTVKL 170
Query: 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
WD ++ LI T +P SS F P IA S D T+ V+D+
Sbjct: 171 WDASSRQLIHTFC-------EPGGYSSYVDF------HPSSTCIATASSDNTVRVWDIRT 217
Query: 190 AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA-EGKSLVTAMSGHASWVLS 248
L H + H V +L + P +L ++SD T + + D EG+ L T + GH
Sbjct: 218 HTLLQHYQVHSAAVNALSFHPSGNHLLTASSDST-LKILDLLEGRLLYT-LHGHQGSASC 275
Query: 249 VDASPDGAAITTGSSDRTVKLWDLN 273
V S G + SD+ V +W N
Sbjct: 276 VSFSRSGDQFASAGSDQQVMVWRTN 300
Score = 202 (76.2 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 47/155 (30%), Positives = 83/155 (53%)
Query: 161 VLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSAS 220
+ S+ +SP G++IA GS+D ++ V+++ + GH V + +SP +L S+S
Sbjct: 21 ITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSP-SAHLLASSS 79
Query: 221 DDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS 280
D V ++ K H V SV S DG ++ T S D+++KLW ++ + + +
Sbjct: 80 RDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICT 139
Query: 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
+ H + V F P G +VSVSDD+++ L++ S
Sbjct: 140 LREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDAS 174
Score = 200 (75.5 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 68/282 (24%), Positives = 117/282 (41%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+ +GS+D +V +W TGH V V PS + AS+S D VR++
Sbjct: 33 IASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVK 92
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
A V + F G +L A S+KLW +I TL
Sbjct: 93 GESVLFRAHTGSVRSVCFSADGQSLLTASDDQ-SIKLWSVHRQKIICTLR---------- 141
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHL--EGHFMPVRSLVYSP 210
+V +SPDG+ + S D T+ ++D + + +H G + + + P
Sbjct: 142 ---EHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSY--VDFHP 196
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
+ ++SD+T V ++D +L+ H++ V ++ P G + T SSD T+K+
Sbjct: 197 SSTCIATASSDNT-VRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKIL 255
Query: 271 DLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
DL + ++ H VSF G + S D+ + ++
Sbjct: 256 DLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 267 (99.0 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 79/265 (29%), Positives = 125/265 (47%)
Query: 13 HEESVWAVTWVPATETRPA-----LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVA 67
H + V + W P + A L TG+ D TV LW+ GH V VA
Sbjct: 213 HTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVA 272
Query: 68 AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
HPSG SAS D+ R++DV T + E ++ + P G+ L +GG A
Sbjct: 273 FHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGS-LVSSGGNDAIG 331
Query: 128 KLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 187
++WD + I L E ++ ++++AWSP+G ++A S D T+ ++D+
Sbjct: 332 RIWDLRSGKSIMVLD----EHIRQ---------IVAMAWSPNGYQLATSSADDTVKIWDL 378
Query: 188 TRAKFLHHLEGHFMPVRSLVY--SPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASW 245
+ H + H V + Y S V+ R + ++ D V +++ SL+ +M GH
Sbjct: 379 RKVSLAHTIPAHSSLVSDVRYIESGVN-RFIATSGYDGCVKLWNPLNCSLIKSMVGHEEK 437
Query: 246 VLSVDASPDGAAITTGSSDRTVKLW 270
V+SVD D I++G DRT+KLW
Sbjct: 438 VMSVDGYGD-RFISSGY-DRTIKLW 460
Score = 199 (75.1 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 75/290 (25%), Positives = 131/290 (45%)
Query: 35 TGSLDETVKLWRPDDM---QLERTNTGHCLGV----VSVA--AHPSGIIAASASLDSFVR 85
+GS VK+W D++ QL R +T G+ + A A + A+ + D+ V
Sbjct: 189 SGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVC 248
Query: 86 VFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPR 145
++ + + LE + V ++ F P G L V+ + +LWD T
Sbjct: 249 LWKASQSTPLLRLEGHLARVGRVAFHPSGDYL-VSASFDTTWRLWDVHT----------- 296
Query: 146 PEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRS 205
G++ + + + S+A PDG ++ G D ++D+ K + L+ H + +
Sbjct: 297 --GVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVA 354
Query: 206 LVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAA--ITTGSS 263
+ +SP ++ S++DDT V ++D SL + H+S V V G I T
Sbjct: 355 MAWSPNGYQLATSSADDT-VKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGY 413
Query: 264 DRTVKLWD-LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
D VKLW+ LN + ++SM H ++V V G R +S D++I L+
Sbjct: 414 DGCVKLWNPLNC-SLIKSMVGHEEKVMSVD--GYGDRFISSGYDRTIKLW 460
Score = 194 (73.4 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 52/209 (24%), Positives = 102/209 (48%)
Query: 108 MQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKK-FVLSVAW 166
++F G A +G VK+W++ NL + + + R TD+ S + L AW
Sbjct: 178 VRFSNNGNHFA-SGSWGGQVKVWNSD--NL-SEVQLFRGH----TDRVSGLDWYPLCQAW 229
Query: 167 SPDGRRI--ACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTH 224
D ++ A G+ D T+ ++ +++ L LEGH V + + P L SAS DT
Sbjct: 230 DADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGD-YLVSASFDTT 288
Query: 225 VHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNH 284
++D + GH+ + S+ PDG+ +++G +D ++WDL ++ + H
Sbjct: 289 WRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEH 348
Query: 285 TDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
Q+ +++ P G ++ + S D ++ +++
Sbjct: 349 IRQIVAMAWSPNGYQLATSSADDTVKIWD 377
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 268 (99.4 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 78/262 (29%), Positives = 121/262 (46%)
Query: 13 HEESVWAVTWVP-AT---ETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAA 68
H +V A+++ P AT E + + + D +VKLW D + GH + V V
Sbjct: 257 HNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTW 316
Query: 69 HPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVK 128
HPSG + D R++D++ I E V + F P G+ LA GG + +
Sbjct: 317 HPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGS-LAGTGGLDSFAR 375
Query: 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 188
+WD T + L EG K + S+ +SP+G +A GS D V+D+
Sbjct: 376 VWDLRTGRCVMFL-----EG--------HIKEIYSINFSPNGFHVATGSGDNACKVWDLR 422
Query: 189 RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248
+ + ++ + H V S+ + P D L + + D ++ G S + ++GH V+
Sbjct: 423 QRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMG 482
Query: 249 VDASPDGAAITTGSSDRTVKLW 270
VD SPDG I T S DRT KLW
Sbjct: 483 VDLSPDGQLIATCSYDRTFKLW 504
Score = 248 (92.4 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 78/290 (26%), Positives = 128/290 (44%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHP--------SGIIAASASLDSF 83
LL+T S KLW+ D L RT GH V +++ HP S + AS + D
Sbjct: 230 LLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGS 289
Query: 84 VRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSI 143
V+++ +D++ IA +E V ++ + P G L G + W W+L I
Sbjct: 290 VKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFL----GTTCYDHSW--RLWDLEVQEEI 343
Query: 144 PRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPV 203
EG K V + + PDG G +D V+D+ + + LEGH +
Sbjct: 344 LHQEG--------HSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEI 395
Query: 204 RSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASP-DGAAITTGS 262
S+ +SP V + S D ++D + + + H + V SV P DG + TG+
Sbjct: 396 YSINFSPNGFHVA-TGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGA 454
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
D T K+W + ++++ H +V GV P G + + S D++ L+
Sbjct: 455 YDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 197 (74.4 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 57/229 (24%), Positives = 99/229 (43%)
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
P+ + +AS +++ V I TL + V + F P+ T L + + V +
Sbjct: 226 PNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQAT-LTLE---ESDVNM 281
Query: 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
A + S+ E + + S + V V W P GR + D + ++D+
Sbjct: 282 ASCAADGSVKLWSLDSDEPIADIEGHSMR--VARVTWHPSGRFLGTTCYDHSWRLWDLEV 339
Query: 190 AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSV 249
+ + H EGH V L + P D + + D+ ++D V + GH + S+
Sbjct: 340 QEEILHQEGHSKGVHDLHFHP-DGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSI 398
Query: 250 DASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGG 298
+ SP+G + TGS D K+WDL R + ++ H + V V F+P G
Sbjct: 399 NFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDG 447
Score = 173 (66.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 51/205 (24%), Positives = 89/205 (43%)
Query: 109 QFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP 168
QF P + L V S KLW LI TL R S + L++ S
Sbjct: 223 QFSPN-SKLLVTASWSGLCKLWKVPDCTLIRTL---RGHNTNVGAISFHPQATLTLEES- 277
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
D +C + DG++ ++ + + + +EGH M V + + P R L + D ++
Sbjct: 278 DVNMASCAA-DGSVKLWSLDSDEPIADIEGHSMRVARVTWHP-SGRFLGTTCYDHSWRLW 335
Query: 229 DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQV 288
D E + + GH+ V + PDG+ TG D ++WDL + + H ++
Sbjct: 336 DLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEI 395
Query: 289 WGVSFRPLGGRVVSVSDDKSISLYE 313
+ ++F P G V + S D + +++
Sbjct: 396 YSINFSPNGFHVATGSGDNACKVWD 420
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 77/266 (28%), Positives = 117/266 (43%)
Query: 48 DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQ 107
+D LER GH V V + AS S+DS + V+ + + V
Sbjct: 38 EDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 97
Query: 108 MQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS 167
+ F P G LA +G +V++W +P +G ++ + V SV +
Sbjct: 98 VNFSPSGHLLA-SGSRDKTVRIW------------VPNIKGESTVFRAHTAT-VRSVHFC 143
Query: 168 PDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 227
DG+ S D TI V+ R KFL L H VR +SP D R++ SASDD V +
Sbjct: 144 SDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKL 202
Query: 228 YDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQ 287
+D + V + H +V VD P G + D TVK+WD+ +Q H+
Sbjct: 203 WDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAA 262
Query: 288 VWGVSFRPLGGRVVSVSDDKSISLYE 313
V +SF P G +V+ S D ++ + +
Sbjct: 263 VNALSFHPSGNYLVTASSDSTLKILD 288
Score = 201 (75.8 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 69/243 (28%), Positives = 104/243 (42%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL +GS D+TV++W P+ H V SV G +AS D ++V+
Sbjct: 106 LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 165
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ +L + V +F P G L V+ +VKLWD + + + G
Sbjct: 166 QKFLFSLSQHINWVRCAKFSPDGR-LIVSASDDKTVKLWDKTSRECVHSYC---EHG--- 218
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
FV V + P G +A MD T+ V+DV + L H + H V +L + P
Sbjct: 219 -------GFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP- 270
Query: 212 DPRVLFSASDDTHVHMYDA-EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
L +AS D+ + + D EG+ L T + GH +V S G +G SD V +W
Sbjct: 271 SGNYLVTASSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Query: 271 DLN 273
N
Sbjct: 330 KSN 332
Score = 201 (75.8 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 69/281 (24%), Positives = 115/281 (40%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L +GS+D + +W TGH V V PSG + AS S D VR++ +
Sbjct: 65 LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIK 124
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
A + V + F G + A ++K+W T + +LS
Sbjct: 125 GESTVFRAHTATVRSVHFCSDGQSFVTASDDK-TIKVWSTHRQKFLFSLS---------- 173
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
+V +SPDGR I S D T+ ++D T + +H H V + + P
Sbjct: 174 ---QHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 230
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
V + D+T V ++D L+ H++ V ++ P G + T SSD T+K+ DL
Sbjct: 231 TCVAAAGMDNT-VKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDL 289
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ ++ H V+F G S D+ + +++
Sbjct: 290 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 330
Score = 187 (70.9 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 48/174 (27%), Positives = 84/174 (48%)
Query: 140 TLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGH 199
T+++P+ + + V V +S + +++A GSMD + V+ + + GH
Sbjct: 32 TMALPQEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGH 91
Query: 200 FMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAIT 259
V + +SP +L S S D V ++ K T H + V SV DG +
Sbjct: 92 KDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFV 150
Query: 260 TGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
T S D+T+K+W + + + S++ H + V F P G +VS SDDK++ L++
Sbjct: 151 TASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 204
Score = 141 (54.7 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 38/124 (30%), Positives = 60/124 (48%)
Query: 20 VTWVPATETRP--ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAAS 77
+ WV + P L+++ S D+TVKLW + + H V V HPSG A+
Sbjct: 176 INWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAA 235
Query: 78 ASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNL 137
A +D+ V+V+DV T+ + + + V + F P G L A S ++K+ D L
Sbjct: 236 AGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS-TLKILDLMEGRL 294
Query: 138 IATL 141
+ TL
Sbjct: 295 LYTL 298
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 79/310 (25%), Positives = 133/310 (42%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRP-DDMQLERTNTGHCLGVVSVAAHPS 71
HE ++ + P E LLL+ D + +W+ +D + +GH V+ P
Sbjct: 54 HEGEIFTAEFHPEGE----LLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPD 109
Query: 72 GIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWD 131
G + S D + +D+ T + + V +Q +G L +G ++K+WD
Sbjct: 110 GSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWD 169
Query: 132 TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK 191
+ TL P V +V + G ++ G +D + ++D+ +
Sbjct: 170 ARKKHAAHTLESPFQ--------------VTAVCFGDTGEQVISGGIDNEVKIWDIRKQA 215
Query: 192 FLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD----AEGKSLVTAMSGHA---- 243
LHHL GH + + SP +L +A D+T + ++D A G+ V GH
Sbjct: 216 VLHHLRGHSDTITGMSLSPEGDFILTNAMDNT-LRVWDVRPYAPGERCVKVFQGHQHNFE 274
Query: 244 SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSV 303
+L SP IT+GS+DR V +WD+N R + + H V V F P ++S
Sbjct: 275 KNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSG 334
Query: 304 SDDKSISLYE 313
S DK++ L E
Sbjct: 335 SSDKTLYLGE 344
Score = 184 (69.8 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 62/250 (24%), Positives = 107/250 (42%)
Query: 25 ATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFV 84
A R LL + T L P MQLE GH + + HP G + S+ D +
Sbjct: 25 AYTNRDKALLESGVRRTSNLQAPI-MQLE----GHEGEIFTAEFHPEGELLLSSGFDRQI 79
Query: 85 RVFDVDTNA-SIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSI 143
++ V + ++ + V + F P G+ + ++ WD AT
Sbjct: 80 YIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDK-TLAFWDIAT--------- 129
Query: 144 PRPEGLKPTDKSSSKKFVLSVAWSPDGRRIAC-GSMDGTISVFDVTRAKFLHHLEGHFMP 202
G + FV SV S G+++ C GS D TI ++D + H LE F
Sbjct: 130 ----GQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQ- 184
Query: 203 VRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGS 262
V ++ + +V+ S D V ++D ++++ + GH+ + + SP+G I T +
Sbjct: 185 VTAVCFGDTGEQVI-SGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNA 243
Query: 263 SDRTVKLWDL 272
D T+++WD+
Sbjct: 244 MDNTLRVWDV 253
Score = 182 (69.1 bits), Expect = 7.8e-12, P = 7.8e-12
Identities = 56/236 (23%), Positives = 106/236 (44%)
Query: 78 ASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNL 137
A L+S VR + A I LE E++ +F P+G L ++ G + +W +
Sbjct: 32 ALLESGVRRTS-NLQAPIMQLEGHEGEIFTAEFHPEGELL-LSSGFDRQIYIWQVYE-DC 88
Query: 138 IATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLE 197
+++ G V+ ++PDG I S D T++ +D+ + +
Sbjct: 89 ENVMAMSGHSGA-----------VMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFK 137
Query: 198 GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAA 257
GH V S+ S ++L S SDD + ++DA K + V +V G
Sbjct: 138 GHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQ-VTAVCFGDTGEQ 196
Query: 258 ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ +G D VK+WD+ +A + + H+D + G+S P G +++ + D ++ +++
Sbjct: 197 VISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWD 252
Score = 181 (68.8 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 69/250 (27%), Positives = 117/250 (46%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGI-IAASASLDSFVRVFDVDT 91
+ T S D+T+ W Q +R GH V SV G + S S D ++++D
Sbjct: 113 IFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARK 172
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ TLE SP +V + F G + ++GG VK+WD ++ L G
Sbjct: 173 KHAAHTLE-SPFQVTAVCFGDTGEQV-ISGGIDNEVKIWDIRKQAVLHHL-----RGHSD 225
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR----AKFLHHLEGHFMPV-RSL 206
T + ++ SP+G I +MD T+ V+DV + + +GH ++L
Sbjct: 226 T--------ITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNL 277
Query: 207 V---YSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSS 263
+ +SP ++ S S D HV+++D + ++ + GH V +VD SP I +GSS
Sbjct: 278 LRCAWSPGSDKIT-SGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSS 336
Query: 264 DRTVKLWDLN 273
D+T+ L +++
Sbjct: 337 DKTLYLGEID 346
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 266 (98.7 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 84/280 (30%), Positives = 128/280 (45%)
Query: 50 MQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQ 109
+Q E + L + SV P G A+ + D +RV+D+ T +++ +
Sbjct: 306 LQDESVDKSGDLYIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLD 365
Query: 110 FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169
F G +A +G G +V+LWD A L+ TLSI +G V +VA SPD
Sbjct: 366 FAGNGRYIA-SGSGDKTVRLWDIAEGKLVYTLSIE--DG------------VTTVAMSPD 410
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLE---GHFMPVRSLVYSPVDPRVLFSASDDTHVH 226
G +A GS+D T+ V+D T + LE GH V S+ ++P + + L S S D +
Sbjct: 411 GLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAP-NGKELVSGSLDKTIK 469
Query: 227 M---------YDAEGKS--LVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMR 275
+ Y++ GK GH +VLSV +PDG + +GS DR V+ WD
Sbjct: 470 LWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITG 529
Query: 276 AAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
A + H + V V+ P G + S D ++ YS
Sbjct: 530 NAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIWRYS 569
Score = 224 (83.9 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 72/249 (28%), Positives = 117/249 (46%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L TG+ D+ +++W ++ +GH + S+ +G AS S D VR++D+
Sbjct: 331 LATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEG 390
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ TL V + P G +A AG +V++WDT T L+ L P+G K +
Sbjct: 391 KLVYTLSIEDG-VTTVAMSPDGLYVA-AGSLDKTVRVWDTTTGYLVERLE--NPDGHKDS 446
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT--RAKF--------LHH-LEGHFM 201
V SVA++P+G+ + GS+D TI ++++ R ++ H EGH
Sbjct: 447 --------VYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKD 498
Query: 202 PVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTG 261
V S+ +P D + S S D V +D + + GH + V+SV SP G TG
Sbjct: 499 FVLSVCLTP-DGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATG 557
Query: 262 SSDRTVKLW 270
S D ++W
Sbjct: 558 SGDMRARIW 566
>MGI|MGI:2443143 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524
KO:K14556 OMA:SIFAHDD HSSP:Q02793 CTD:10885 HOVERGEN:HBG013192
OrthoDB:EOG412M4S EMBL:AK050738 EMBL:AK050797 EMBL:BC063100
IPI:IPI00221822 RefSeq:NP_780761.1 UniGene:Mm.24591
ProteinModelPortal:Q8BHB4 SMR:Q8BHB4 STRING:Q8BHB4
PhosphoSite:Q8BHB4 PaxDb:Q8BHB4 PRIDE:Q8BHB4
Ensembl:ENSMUST00000052120 GeneID:269470 KEGG:mmu:269470
UCSC:uc008qqo.2 InParanoid:Q8BHB4 NextBio:392854 Bgee:Q8BHB4
Genevestigator:Q8BHB4 Uniprot:Q8BHB4
Length = 942
Score = 244 (91.0 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 71/282 (25%), Positives = 126/282 (44%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+L+ + D ++K+W +Q RT C + P + ++++D+ +
Sbjct: 429 VLSAAAD-SIKIWNRSTLQCIRTMP--CEYALCSFFVPGDRQVVIGTKTGNLQLYDLASG 485
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL-SIPRPEGLKP 151
+ T+ A +W M P V GG +VK WD + L+ S + +K
Sbjct: 486 TLLETIAAHDGALWSMSLSPDQRGF-VTGGADKAVKFWD---FELVTDKNSTQKRLSVKQ 541
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
T + VL V++SP+ + +A +D T+ VF V KF L GH +PV + S
Sbjct: 542 TRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKVFYVDTLKFFLSLYGHKLPVLCMDISH- 600
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
D ++ + S D +V ++ + ++ H V+ + P T D +K WD
Sbjct: 601 DGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQWD 660
Query: 272 LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ +Q++ H ++W ++ P G VVS S DKS+ L+E
Sbjct: 661 ADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWE 702
Score = 169 (64.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 80/306 (26%), Positives = 128/306 (41%)
Query: 24 PATETRPALLLTGSLDE----TVKLWRPDDMQLER-TNTGHCLGVVSVAAHPSGIIAASA 78
P E + LL +L E L P ++ R T GH V +++ I SA
Sbjct: 373 PQGELKAVFLLQNNLVELYSLNASLPAPQPVRTSRITIGGHRSDVRTLSFSSDNIAVLSA 432
Query: 79 SLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLI 138
+ DS +++++ T I T+ P E F G V G + +++L+D A+ L+
Sbjct: 433 AADS-IKIWNRSTLQCIRTM---PCEYALCSFFVPGDRQVVIGTKTGNLQLYDLASGTLL 488
Query: 139 ATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFD---VT----RAK 191
T++ +G + S++ SPD R G D + +D VT K
Sbjct: 489 ETIAAH--DGA-----------LWSMSLSPDQRGFVTGGADKAVKFWDFELVTDKNSTQK 535
Query: 192 FLHHLEGHFMP----VRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVL 247
L + + V + YSP + S D T V ++ + ++ GH VL
Sbjct: 536 RLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCT-VKVFYVDTLKFFLSLYGHKLPVL 594
Query: 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDK 307
+D S DGA I TGS+DR VK+W L+ +S+ H D V + F P + D
Sbjct: 595 CMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGKDH 654
Query: 308 SISLYE 313
I ++
Sbjct: 655 KIKQWD 660
Score = 166 (63.5 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 44/157 (28%), Positives = 72/157 (45%)
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVL 216
+K+ V + SPDG +A G DG I +F + + GH V SL Y + R L
Sbjct: 64 NKQEVTCLCPSPDGLHLAVGYEDGAIRIFSLLSGEGNITFNGHKAAVTSLKYDQLGGR-L 122
Query: 217 FSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRA 276
S S DT V ++D +S + + GH V + + T D VK WDL+ +
Sbjct: 123 ASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDLDNQH 182
Query: 277 AMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
++M H +VWG+ R+++ + D + ++
Sbjct: 183 CFKTMVGHRTEVWGLVLVSEEKRLITGAADSELRAWD 219
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 45/190 (23%), Positives = 85/190 (44%)
Query: 84 VRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSI 143
V ++D+ I L+ + EV + P G LAV G +++++ S+
Sbjct: 47 VFIWDLRKGEKILILQGNKQEVTCLCPSPDGLHLAV-GYEDGAIRIF-----------SL 94
Query: 144 PRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPV 203
EG + K V S+ + G R+A GS D + ++DV L+ L+GH V
Sbjct: 95 LSGEG--NITFNGHKAAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAV 152
Query: 204 RSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSS 263
++ + +L ++ DT V +D + + M GH + V + + + TG++
Sbjct: 153 TQALFLR-ERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEEKRLITGAA 211
Query: 264 DRTVKLWDLN 273
D ++ WD++
Sbjct: 212 DSELRAWDID 221
Score = 121 (47.7 bits), Expect = 0.00039, P = 0.00039
Identities = 32/108 (29%), Positives = 49/108 (45%)
Query: 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90
AL+ TGS D VK+W D R+ H V+ + P + +A D ++ +D D
Sbjct: 603 ALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQWDAD 662
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLI 138
I TLE E+W + P G + V+ S++LW+ LI
Sbjct: 663 KFEHIQTLEGHHQEIWCLAVSPSGDYV-VSASHDKSLRLWERTREPLI 709
Score = 52 (23.4 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQ 51
H VW + V + E R L+TG+ D ++ W D +Q
Sbjct: 190 HRTEVWGLVLV-SEEKR---LITGAADSELRAWDIDYLQ 224
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 74/266 (27%), Positives = 117/266 (43%)
Query: 48 DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQ 107
+D LER GH V V + AS S+DS + ++ + + V
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTC 66
Query: 108 MQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS 167
+ F P G LA +G +V++W +P +G ++ + V SV +
Sbjct: 67 VNFSPSGHLLA-SGSRDKTVRIW------------VPNVKGESTVFRAHTAT-VRSVHFC 112
Query: 168 PDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 227
DG+ + S D T+ V+ R +FL L H VR +SP D R++ SASDD V +
Sbjct: 113 SDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSP-DGRLIVSASDDKTVKL 171
Query: 228 YDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQ 287
+D + V + H +V VD P G I D TVK+WD +Q H+
Sbjct: 172 WDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAA 231
Query: 288 VWGVSFRPLGGRVVSVSDDKSISLYE 313
V +SF P G +++ S D ++ + +
Sbjct: 232 VNALSFHPSGNYLITASSDSTLKILD 257
Score = 210 (79.0 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 71/281 (25%), Positives = 116/281 (41%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L +GS+D T+ +W TGH V V PSG + AS S D VR++ +
Sbjct: 34 LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK 93
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
A + V + F G L A +VK+W T + +L+
Sbjct: 94 GESTVFRAHTATVRSVHFCSDGQLLVTASDDK-TVKVWSTHRQRFLFSLT---------- 142
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
+V +SPDGR I S D T+ ++D T + +H H V + + P
Sbjct: 143 ---QHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ + D+T V ++D LV H++ V ++ P G + T SSD T+K+ DL
Sbjct: 200 TCIAAAGMDNT-VKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDL 258
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ ++ H V+F G S D+ + +++
Sbjct: 259 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 201 (75.8 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 69/243 (28%), Positives = 104/243 (42%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL +GS D+TV++W P+ H V SV G + +AS D V+V+
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHR 134
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ +L + V +F P G L V+ +VKLWD + + + G
Sbjct: 135 QRFLFSLTQHINWVRCAKFSPDGR-LIVSASDDKTVKLWDKTSRECVHSYC---EHG--- 187
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
FV V + P G IA MD T+ V+D + + H + H V +L + P
Sbjct: 188 -------GFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHP- 239
Query: 212 DPRVLFSASDDTHVHMYDA-EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
L +AS D+ + + D EG+ L T + GH +V S G +G SD V +W
Sbjct: 240 SGNYLITASSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Query: 271 DLN 273
N
Sbjct: 299 KSN 301
Score = 169 (64.5 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 57/218 (26%), Positives = 97/218 (44%)
Query: 5 GLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVV 64
G +V AH +V +V + + LL+T S D+TVK+W + + T H V
Sbjct: 94 GESTVFRAHTATVRSVHFCSDGQ----LLVTASDDKTVKVWSTHRQRFLFSLTQHINWVR 149
Query: 65 SVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGS 124
P G + SAS D V+++D + + + V + F P GT +A AG +
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 125 ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISV 184
+VK+WDT T L+ + S++ V ++++ P G + S D T+ +
Sbjct: 210 -TVKVWDTRTHRLVQHYQL----------HSAA---VNALSFHPSGNYLITASSDSTLKI 255
Query: 185 FDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
D+ + L+ L GH P ++ +S SD+
Sbjct: 256 LDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDE 293
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 256 (95.2 bits), Expect = 9.4e-22, P = 9.4e-22
Identities = 73/266 (27%), Positives = 117/266 (43%)
Query: 48 DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQ 107
+D LER GH V V + AS S+DS + ++ + + V
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTC 66
Query: 108 MQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS 167
+ F P G LA +G +V++W +P +G ++ + V SV +
Sbjct: 67 VNFSPSGHLLA-SGSRDKTVRIW------------VPNVKGESTVFRAHTAT-VRSVHFC 112
Query: 168 PDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 227
DG+ + S D T+ V+ R +FL L H VR +SP D R++ SASDD V +
Sbjct: 113 SDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSP-DGRLIVSASDDKTVKL 171
Query: 228 YDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQ 287
+D + + + H +V VD P G I D TVK+WD +Q H+
Sbjct: 172 WDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAA 231
Query: 288 VWGVSFRPLGGRVVSVSDDKSISLYE 313
V +SF P G +++ S D ++ + +
Sbjct: 232 VNALSFHPSGNYLITASSDSTLKILD 257
Score = 214 (80.4 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 71/281 (25%), Positives = 118/281 (41%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L +GS+D T+ +W TGH V V PSG + AS S D VR++ +
Sbjct: 34 LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK 93
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
A + V + F G +L A +VK+W T + +L+
Sbjct: 94 GESTVFRAHTATVRSVHFCSDGQSLVTASDDK-TVKVWSTHRQRFLFSLT---------- 142
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
+V +SPDGR I S D T+ ++D T + +H H V + + P
Sbjct: 143 ---QHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSG 199
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ + D+T V ++DA L+ H++ V ++ P G + T SSD T+K+ DL
Sbjct: 200 TCIAAAGMDNT-VKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDL 258
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ ++ H V+F G S D+ + +++
Sbjct: 259 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 201 (75.8 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 71/243 (29%), Positives = 103/243 (42%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL +GS D+TV++W P+ H V SV G +AS D V+V+
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHR 134
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ +L + V +F P G L V+ +VKLWD + I + G
Sbjct: 135 QRFLFSLTQHINWVRCAKFSPDGR-LIVSASDDKTVKLWDKTSRECIHSYC---EHG--- 187
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
FV V + P G IA MD T+ V+D + L H + H V +L + P
Sbjct: 188 -------GFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHP- 239
Query: 212 DPRVLFSASDDTHVHMYDA-EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
L +AS D+ + + D EG+ L T + GH +V S G +G SD V +W
Sbjct: 240 SGNYLITASSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Query: 271 DLN 273
N
Sbjct: 299 KSN 301
Score = 134 (52.2 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 20 VTWVPATETRP--ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAAS 77
+ WV + P L+++ S D+TVKLW + + H V V HPSG A+
Sbjct: 145 INWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAA 204
Query: 78 ASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNL 137
A +D+ V+V+D T+ + + + V + F P G L A S ++K+ D L
Sbjct: 205 AGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDS-TLKILDLMEGRL 263
Query: 138 IATL 141
+ TL
Sbjct: 264 LYTL 267
>SGD|S000004119 [details] [associations]
symbol:DIP2 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0030515 "snoRNA binding" evidence=IPI] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000004119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945 EMBL:X91258
EMBL:U53881 EMBL:X89514 EMBL:U53877 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 InterPro:IPR007148 Pfam:PF04003
GO:GO:0034388 EMBL:Z73301 EMBL:Z73302 PIR:S59317 RefSeq:NP_013230.1
ProteinModelPortal:Q12220 SMR:Q12220 DIP:DIP-6494N IntAct:Q12220
MINT:MINT-620162 STRING:Q12220 PaxDb:Q12220 PeptideAtlas:Q12220
EnsemblFungi:YLR129W GeneID:850820 KEGG:sce:YLR129W CYGD:YLR129w
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 NextBio:967067 Genevestigator:Q12220
GermOnline:YLR129W Uniprot:Q12220
Length = 943
Score = 247 (92.0 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 76/292 (26%), Positives = 133/292 (45%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL T S + ++K+W + RT C ++ P G++ + + +++FD+ +
Sbjct: 405 LLATAS-NGSLKIWNIKTHKCIRTF--ECGYALTCKFLPGGLLVILGTRNGELQLFDLAS 461
Query: 92 NASIATLE-ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWN---------LIATL 141
++ + T+E A + +W + G L V G +VK WD N + L
Sbjct: 462 SSLLDTIEDAHDAAIWSLDLTSDGKRL-VTGSADKTVKFWDFKVENSLVPGTKNKFLPVL 520
Query: 142 SIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFM 201
+ L+ TD +L V SPD R +A +D T+ VF + KF L GH +
Sbjct: 521 KLHHDTTLELTDD------ILCVRVSPDDRYLAISLLDNTVKVFFLDSMKFYLSLYGHKL 574
Query: 202 PVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTG 261
PV S+ S D +++ ++S D ++ ++ + ++ H +++V P +
Sbjct: 575 PVLSIDIS-FDSKMIITSSADKNIKIWGLDFGDCHKSLFAHQDSIMNVKFLPQSHNFFSC 633
Query: 262 SSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
S D VK WD +Q + H +VW ++ GG VVS S D SI ++E
Sbjct: 634 SKDAVVKYWDGEKFECIQKLYAHQSEVWALAVATDGGFVVSSSHDHSIRIWE 685
Score = 176 (67.0 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 78/322 (24%), Positives = 137/322 (42%)
Query: 19 AVTWVPATETRPALLLTGSLDETVKLWR-------PDDMQLERTNT----GHCLGVVSVA 67
+ +W + ++ L+LT S T++ + P +T+T G V S+
Sbjct: 340 SASWTTVSSSKLELVLTTS-SNTIEYYSIPYEKRDPTSPAPLKTHTIELQGQRTDVRSID 398
Query: 68 AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
+ A+AS S ++++++ T+ I T E + +F P G L + G + +
Sbjct: 399 ISDDNKLLATASNGS-LKIWNIKTHKCIRTFECGYALT--CKFLPGGL-LVILGTRNGEL 454
Query: 128 KLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 187
+L+D A+ +L+ T+ + D +S DG+R+ GS D T+ +D
Sbjct: 455 QLFDLASSSLLDTIEDAHDAAIWSLDLTS------------DGKRLVTGSADKTVKFWDF 502
Query: 188 ---------TRAKFLHHLEGHFMPVRSLV-------YSPVDPRVLFSASDDTHVHMYDAE 231
T+ KFL L+ H L SP D + S D+T V ++ +
Sbjct: 503 KVENSLVPGTKNKFLPVLKLHHDTTLELTDDILCVRVSPDDRYLAISLLDNT-VKVFFLD 561
Query: 232 GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGV 291
++ GH VLS+D S D I T S+D+ +K+W L+ +S+ H D + V
Sbjct: 562 SMKFYLSLYGHKLPVLSIDISFDSKMIITSSADKNIKIWGLDFGDCHKSLFAHQDSIMNV 621
Query: 292 SFRPLGGRVVSVSDDKSISLYE 313
F P S S D + ++
Sbjct: 622 KFLPQSHNFFSCSKDAVVKYWD 643
Score = 159 (61.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 44/187 (23%), Positives = 82/187 (43%)
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFD 186
V +WD T +L++ LS P G + + A D +A G DG I V+D
Sbjct: 49 VNIWDIKTGDLVSKLSDGLPPGASDARGAKPAECTYLEAHK-DTDLLAVGYADGVIKVWD 107
Query: 187 VTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWV 246
+ L + GH + L + R L S S D+++ ++D G+ + + H +
Sbjct: 108 LMSKTVLLNFNGHKAAITLLQFDGTGTR-LISGSKDSNIIVWDLVGEVGLYKLRSHKDSI 166
Query: 247 LSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDD 306
+ I+T S D +KLWDL +++ HT + WG++ + +++ D
Sbjct: 167 TGFWCQGEDWLIST-SKDGMIKLWDLKTHQCIETHIAHTGECWGLAVKD--DLLITTGTD 223
Query: 307 KSISLYE 313
+ +++
Sbjct: 224 SQVKIWK 230
Score = 91 (37.1 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 31/107 (28%), Positives = 46/107 (42%)
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
G R+ GS D I V+D+ L+ L H + D L S S D + ++D
Sbjct: 133 GTRLISGSKDSNIIVWDLVGEVGLYKLRSHKDSITGFWCQGED--WLISTSKDGMIKLWD 190
Query: 230 AEGKSLVTAMSGHAS--WVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
+ + H W L+V D ITTG+ D VK+W L++
Sbjct: 191 LKTHQCIETHIAHTGECWGLAVK---DDLLITTGT-DSQVKIWKLDI 233
Score = 74 (31.1 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 27/128 (21%), Positives = 57/128 (44%)
Query: 22 WVPATE-----TRPALLLTGSLDETVKLW--RPDDMQLERTNTGHCLGVVS--------- 65
W+PA+ + P L+T +L++ V +W + D+ + + + G G
Sbjct: 25 WIPASSGNSNGSGPGQLITSALED-VNIWDIKTGDL-VSKLSDGLPPGASDARGAKPAEC 82
Query: 66 --VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGG 123
+ AH + A D ++V+D+ + + + + +QFD GT L ++G
Sbjct: 83 TYLEAHKDTDLLAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRL-ISGSK 141
Query: 124 SASVKLWD 131
+++ +WD
Sbjct: 142 DSNIIVWD 149
Score = 44 (20.5 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 32 LLLTGSLDETVKLWRPD 48
LL+T D VK+W+ D
Sbjct: 216 LLITTGTDSQVKIWKLD 232
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 186 (70.5 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 43/153 (28%), Positives = 79/153 (51%)
Query: 161 VLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSAS 220
V ++ S DGR IA S D TI ++D + + + L GH V + ++P R L S S
Sbjct: 468 VNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFS-RQLASGS 526
Query: 221 DDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS 280
D + +++ + + V + GH +L + G + + ++D VK+W L+ + +
Sbjct: 527 GDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVAT 586
Query: 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ NH D+VW ++ R G +VS D +S+++
Sbjct: 587 LDNHEDRVWALASRFDGSLLVSGGADAVVSVWK 619
Score = 172 (65.6 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 47/194 (24%), Positives = 90/194 (46%)
Query: 91 TNASIATLEASPSEVWQMQFDPKG--TTLAVAGGGSASVKLWDTATWNLIATLSIPRPEG 148
T+ I T + ++ ++ D T LA+ S S KL L+ IP
Sbjct: 39 TDRIIGTRSETGERLFSIKKDEDDYVTALAIT---SDSKKLIAAFRSRLLTIYEIPSGRR 95
Query: 149 LKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVY 208
+K + V+++ P +A G +G + V+D+ A H GH + +L +
Sbjct: 96 IKSMKAHETP--VITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCF 153
Query: 209 SP-VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTV 267
+ VL S +DD+ V ++D + GH+S + + P G+ + +GS D+TV
Sbjct: 154 GKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTV 213
Query: 268 KLWDLNMRAAMQSM 281
++W++ R+A++++
Sbjct: 214 QVWNIKKRSAVRTI 227
Score = 164 (62.8 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 72/318 (22%), Positives = 135/318 (42%)
Query: 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD--MQLERTNTGHCLGVVSV 66
V+ H E+ + VP +E L + L ++ P + + +++ N G V+
Sbjct: 272 VDTTHSETNAIIQVVPFSENT-LLSVHSDLSLLLRKRVPGEGFITIKKLN-GSFDEVIDC 329
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
A +A ++ + F+ V D LE V + G LA G +
Sbjct: 330 AWIGDDHLAVCSNTE-FIDVISTDGTQVFGVLEGHTDIVLTLDSSEDGVWLAT-GAKDNT 387
Query: 127 VKLW----DTATWNLIA-----TLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS 177
V+LW + + I T S+ L P D + F+ S + +R GS
Sbjct: 388 VRLWNLNIEDNVYKCIHVFTGHTASVTAV-ALGPLDVNGYPTFLASSSQDRTLKRFNLGS 446
Query: 178 MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT 237
S F RA + ++ H V ++ S D R++ SAS D + ++D+ +V
Sbjct: 447 QLNK-SDFS-NRAVWT--IKAHDRDVNAIQVSK-DGRIIASASQDKTIKLWDSSTGEVVG 501
Query: 238 AMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLG 297
+ GH V + +P + +GS DRT+++W+++ + +Q++ HT + + + G
Sbjct: 502 VLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQG 561
Query: 298 GRVVSVSDDKSISLYEYS 315
+VVS + D + ++ S
Sbjct: 562 TQVVSAAADGLVKVWSLS 579
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 41/133 (30%), Positives = 64/133 (48%)
Query: 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAA 68
V H VWA ++ P + L +GS D T+++W D Q +T GH ++ +
Sbjct: 502 VLRGHRRGVWACSFNPFSRQ----LASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIY 557
Query: 69 HPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQM--QFDPKGTTLAVAGGGSAS 126
G SA+ D V+V+ + + +ATL+ VW + +FD G+ L V+GG A
Sbjct: 558 ISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALASRFD--GSLL-VSGGADAV 614
Query: 127 VKLWDTATWNLIA 139
V +W T IA
Sbjct: 615 VSVWKDVTEEYIA 627
Score = 154 (59.3 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 33/161 (20%), Positives = 77/161 (47%)
Query: 154 KSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDP 213
K +V ++A + D +++ ++++++ + + ++ H PV ++ P +
Sbjct: 57 KKDEDDYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNT 116
Query: 214 RVLFSASDDTHVHMYDAEGKSLVTAMSGHASWV--LSVDASPDGAAITTGSSDRTVKLWD 271
+L + + V ++D G + + GH + L + + +G+ D V+LWD
Sbjct: 117 -LLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWD 175
Query: 272 LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
LN +M H+ + G++F P G ++S S DK++ ++
Sbjct: 176 LNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVW 216
Score = 144 (55.7 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 51/190 (26%), Positives = 88/190 (46%)
Query: 12 AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPS 71
AH+ V A+ + + R ++ + S D+T+KLW ++ GH GV + + +P
Sbjct: 463 AHDRDVNAIQ--VSKDGR--IIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPF 518
Query: 72 GIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWD 131
AS S D +R+++VDT + TLE + ++ + +GT + V+ VK+W
Sbjct: 519 SRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQV-VSAAADGLVKVWS 577
Query: 132 TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF-DVTR- 189
++ +ATL D + + L+ + DG + G D +SV+ DVT
Sbjct: 578 LSSGECVATL-----------DNHEDRVWALASRF--DGSLLVSGGADAVVSVWKDVTEE 624
Query: 190 --AKFLHHLE 197
AK LE
Sbjct: 625 YIAKQAEELE 634
Score = 137 (53.3 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 42/141 (29%), Positives = 75/141 (53%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS 65
+KS++ AHE V +T P T T LL TG + VK+W + + GH GV+S
Sbjct: 96 IKSMK-AHETPVITMTIDP-TNT---LLATGGAEGLVKVWDIAGAYVTHSFRGHG-GVIS 149
Query: 66 VAA---HPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGG 122
H + + AS + DS VR++D++++ S+A E S + + F+P G+ L ++G
Sbjct: 150 ALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFL-LSGS 208
Query: 123 GSASVKLWDTATWNLIATLSI 143
+V++W+ + + T+ +
Sbjct: 209 RDKTVQVWNIKKRSAVRTIPV 229
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 58/253 (22%), Positives = 105/253 (41%)
Query: 64 VSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGG 123
+++ + +IAA S + ++++ + I +++A + V M DP T LA GG
Sbjct: 67 LAITSDSKKLIAAFRS--RLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLAT-GGA 123
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
VK+WD A T S R G + K W +A G+ D +
Sbjct: 124 EGLVKVWDIA--GAYVTHSF-RGHGGVISALCFGKH---QNTWV-----LASGADDSRVR 172
Query: 184 VFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLV-TAMSGH 242
++D+ ++ + EGH +R L + P L S S D V +++ + +S V T H
Sbjct: 173 LWDLNSSRSMAVFEGHSSVIRGLTFEPTGS-FLLSGSRDKTVQVWNIKKRSAVRTIPVFH 231
Query: 243 ASWVLS-VDASPDGAAITTGSSDRTVKLWDLNMRAAMQSM--TNHTDQVWGVSFRPLG-G 298
+ + V+ P+ + T + WD + + T H++ + P
Sbjct: 232 SVEAIGWVNGQPEEKILYTAGEGNLILAWDWKSGSRLDPGVDTTHSETNAIIQVVPFSEN 291
Query: 299 RVVSVSDDKSISL 311
++SV D S+ L
Sbjct: 292 TLLSVHSDLSLLL 304
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 260 (96.6 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 81/255 (31%), Positives = 121/255 (47%)
Query: 59 HCLGVVS-VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
H V S V SG + A+ D V ++ V I +L S V +QF+ +
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERV 78
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS 177
VAG S S++LWD ++ TL K + S+ + P G +A GS
Sbjct: 79 -VAGSLSGSLRLWDLEAAKILRTLM-------------GHKASISSLDFHPMGEYLASGS 124
Query: 178 MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT 237
+D I ++DV R + +GH VR L +SP D + L SASDD+ V ++D ++T
Sbjct: 125 VDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSP-DGKWLASASDDSTVKLWDLIAGKMIT 183
Query: 238 AMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLG 297
+ H S V V P+ + +GS+DRTVKLWDL + S T V V F P G
Sbjct: 184 EFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDG 243
Query: 298 GRVVSVSDDKSISLY 312
+ S S++ ++ +Y
Sbjct: 244 SCLYSGSEN-TLRVY 257
Score = 219 (82.2 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 63/223 (28%), Positives = 101/223 (45%)
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
T+ + + A S V + L GG V +W + N I +L
Sbjct: 9 TSWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSL--------- 59
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
T +S+ V + ++ R+ GS+ G++ ++D+ AK L L GH + SL + P
Sbjct: 60 -TGHTSA---VGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHP 115
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
+ L S S D+++ ++D K V GH V + SPDG + + S D TVKLW
Sbjct: 116 MG-EYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLW 174
Query: 271 DLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
DL + T+HT V V F P + S S D+++ L++
Sbjct: 175 DLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWD 217
Score = 206 (77.6 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 63/239 (26%), Positives = 112/239 (46%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL TG D V +W + TGH V + + S + SL +R++D++
Sbjct: 35 LLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEA 94
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ TL + + + F P G LA +G +++KLWD R +G
Sbjct: 95 AKILRTLMGHKASISSLDFHPMGEYLA-SGSVDSNIKLWDV------------RRKGCVF 141
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
K ++ V +A+SPDG+ +A S D T+ ++D+ K + H V + + P
Sbjct: 142 RYKGHTQA-VRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHP- 199
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
+ +L S S D V ++D E +++ + G V SV +PDG+ + +GS + T++++
Sbjct: 200 NEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGS-ENTLRVY 257
Score = 197 (74.4 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 61/199 (30%), Positives = 100/199 (50%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
++ GSL +++LW + ++ RT GH + S+ HP G AS S+DS ++++DV
Sbjct: 78 VVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRK 137
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ + V + F P G LA A S +VKLWD LIA G T
Sbjct: 138 GCVFRYKGHTQAVRCLAFSPDGKWLASASDDS-TVKLWD-----LIA--------GKMIT 183
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
+ +S V V + P+ +A GS D T+ ++D+ + + EG VRS++++P D
Sbjct: 184 EFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNP-D 242
Query: 213 PRVLFSASDDTHVHMYDAE 231
L+S S++T + +Y E
Sbjct: 243 GSCLYSGSENT-LRVYGWE 260
>UNIPROTKB|P74598 [details] [associations]
symbol:sll1491 "Uncharacterized WD repeat-containing
protein sll1491" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S76794 RefSeq:NP_442894.1
RefSeq:YP_005652955.1 ProteinModelPortal:P74598 IntAct:P74598
GeneID:12255406 GeneID:952007 KEGG:syn:sll1491 KEGG:syy:SYNGTS_3002
PATRIC:23843592 OMA:KMPEQTI ProtClustDB:CLSK2301952 Uniprot:P74598
Length = 348
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 73/243 (30%), Positives = 123/243 (50%)
Query: 39 DETVKLWRP-DDMQLERTNTGHCLGVVSVAAHPSG--IIAASASLDSFVRVFDVDTNASI 95
D V + R D M++E T GH V VA P G I++ S D +R+++ + I
Sbjct: 123 DNNVDVRRVRDGMRVE-TLVGHTDKVSGVAFSPDGETIVSVSGG-DRTIRIWERASGNLI 180
Query: 96 ATLEASPSEVWQMQFDPKGTTLAVAG-GGSASVKLWDTATWNLIATLSIPRPEGLKPTDK 154
TL + + F P G+ G ++K WD T+ L+ T P+ G
Sbjct: 181 QTLADNLGPTTSVVFTPDGSQFITGAIGQDRTIKFWDANTFELLGTS--PQQPG------ 232
Query: 155 SSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPR 214
F+ +A +PDGR++ G++ + +++ AK L + G + + ++ SP + R
Sbjct: 233 -----FINGLAVTPDGRKLV-GAVRNFVKAWNLADAKELFSVRGPSLEINTIAVSP-NNR 285
Query: 215 VLFSASDDTHVHMYD-AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLN 273
+ +A+ + + ++D A GK VT + GH WVLS+ SPDG + +G+ D+TVK+WDL+
Sbjct: 286 WVATANKEGTIMIFDLANGKQ-VTTLRGHQGWVLSLAFSPDGNTLYSGAEDKTVKIWDLS 344
Query: 274 MRA 276
A
Sbjct: 345 ALA 347
Score = 180 (68.4 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 60/238 (25%), Positives = 112/238 (47%)
Query: 81 DSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIAT 140
D+ V V V + TL +V + F P G T+ GG ++++W+ A+ NLI T
Sbjct: 123 DNNVDVRRVRDGMRVETLVGHTDKVSGVAFSPDGETIVSVSGGDRTIRIWERASGNLIQT 182
Query: 141 LSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSM--DGTISVFDVTRAKFLHHLEG 198
L+ + L PT SV ++PDG + G++ D TI +D + L
Sbjct: 183 LA----DNLGPTT---------SVVFTPDGSQFITGAIGQDRTIKFWDANTFELLGTSPQ 229
Query: 199 HFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHASWVLSVDASPDGAA 257
+ L +P D R L A + V ++ A+ K L + + G + + ++ SP+
Sbjct: 230 QPGFINGLAVTP-DGRKLVGAVRN-FVKAWNLADAKELFS-VRGPSLEINTIAVSPNNRW 286
Query: 258 ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
+ T + + T+ ++DL + ++ H V ++F P G + S ++DK++ +++ S
Sbjct: 287 VATANKEGTIMIFDLANGKQVTTLRGHQGWVLSLAFSPDGNTLYSGAEDKTVKIWDLS 344
Score = 127 (49.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 36/150 (24%), Positives = 70/150 (46%)
Query: 167 SPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVH 226
+PDG+ +A + D I++ D+ + ++ L S D + L A+D+ +V
Sbjct: 70 TPDGKYLAVATADNQITLIDLANQEVVYSQRSPVNNFADLAIS-ADGQWLAIAADN-NVD 127
Query: 227 MYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSS-DRTVKLWDLNMRAAMQSMTNHT 285
+ V + GH V V SPDG I + S DRT+++W+ +Q++ ++
Sbjct: 128 VRRVRDGMRVETLVGHTDKVSGVAFSPDGETIVSVSGGDRTIRIWERASGNLIQTLADNL 187
Query: 286 DQVWGVSFRPLGGRVVS--VSDDKSISLYE 313
V F P G + ++ + D++I ++
Sbjct: 188 GPTTSVVFTPDGSQFITGAIGQDRTIKFWD 217
Score = 116 (45.9 bits), Expect = 0.00034, P = 0.00034
Identities = 53/247 (21%), Positives = 102/247 (41%)
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASP-SEVWQMQFDPKGTTLAVAGGGSASVK 128
P G A A+ D+ + + D+ N + + SP + + G LA+A + V+
Sbjct: 71 PDGKYLAVATADNQITLIDL-ANQEVVYSQRSPVNNFADLAISADGQWLAIAADNNVDVR 129
Query: 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSM-DGTISVFDV 187
+ TL + TDK S VA+SPDG I S D TI +++
Sbjct: 130 R--VRDGMRVETL-------VGHTDKVSG------VAFSPDGETIVSVSGGDRTIRIWER 174
Query: 188 TRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSA-SDDTHVHMYDAEGKSLVTAMSGHASWV 246
+ L + P S+V++P + + A D + +DA L+ ++
Sbjct: 175 ASGNLIQTLADNLGPTTSVVFTPDGSQFITGAIGQDRTIKFWDANTFELLGTSPQQPGFI 234
Query: 247 LSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDD 306
+ +PDG + G+ VK W+L + S+ + ++ ++ P V + + +
Sbjct: 235 NGLAVTPDGRKLV-GAVRNFVKAWNLADAKELFSVRGPSLEINTIAVSPNNRWVATANKE 293
Query: 307 KSISLYE 313
+I +++
Sbjct: 294 GTIMIFD 300
Score = 113 (44.8 bits), Expect = 0.00073, P = 0.00073
Identities = 27/98 (27%), Positives = 46/98 (46%)
Query: 34 LTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA 93
L G++ VK W D + + G L + ++A P+ A+A+ + + +FD+
Sbjct: 246 LVGAVRNFVKAWNLADAKELFSVRGPSLEINTIAVSPNNRWVATANKEGTIMIFDLANGK 305
Query: 94 SIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWD 131
+ TL V + F P G TL +G +VK+WD
Sbjct: 306 QVTTLRGHQGWVLSLAFSPDGNTL-YSGAEDKTVKIWD 342
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 252 (93.8 bits), Expect = 7.4e-21, P = 7.4e-21
Identities = 81/253 (32%), Positives = 119/253 (47%)
Query: 53 ERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDP 112
+ T L + SV P G + A+ + D +R++D+ T I L +++ + F P
Sbjct: 248 DNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFP 307
Query: 113 KGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRR 172
G L V+G G SV++WD T TLSI +G V +VA SPDG+
Sbjct: 308 DGDRL-VSGSGDRSVRIWDLRTSQCSLTLSIE--DG------------VTTVAVSPDGKL 352
Query: 173 IACGSMDGTISVFDVTRAKFLHHLE-------GHFMPVRSLVYSPVDPRVLFSASDDTHV 225
IA GS+D T+ V+D T + L+ GH V S+ +S ++ S S D V
Sbjct: 353 IAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIA-SGSLDRTV 411
Query: 226 HMYDAEGKS------LVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQ 279
++ EGKS VT + GH +VLSV +PD I +GS DR V WD +
Sbjct: 412 KLWHLEGKSDKKSTCEVTYI-GHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLL 470
Query: 280 SMTNHTDQVWGVS 292
+ H + V V+
Sbjct: 471 MLQGHRNSVISVA 483
Score = 218 (81.8 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 68/240 (28%), Positives = 117/240 (48%)
Query: 82 SFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL 141
+F + D+D + +L+ S S V ++F G +A G + + ++++ T L+A L
Sbjct: 184 AFSKDLDIDM---VHSLDHS-SVVCCVRFSRDGKFIAT--GCNKTTQVFNVTTGELVAKL 237
Query: 142 SIPRPEGLKPTDKS--SSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGH 199
I D + S ++ SV +SPDG+ +A G+ D I ++D++ + + L GH
Sbjct: 238 -IDESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGH 296
Query: 200 FMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAIT 259
+ SL + P R L S S D V ++D +S V +V SPDG I
Sbjct: 297 EQDIYSLDFFPDGDR-LVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSPDGKLIA 354
Query: 260 TGSSDRTVKLWDLN-------MRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
GS DRTV++WD + + ++ H D V+ V+F G ++ S S D+++ L+
Sbjct: 355 AGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLW 414
Score = 197 (74.4 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 72/249 (28%), Positives = 114/249 (45%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL TG+ D+ +++W ++ + GH + S+ P G S S D VR++D+ T
Sbjct: 269 LLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRT 328
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ TL V + P G +A AG +V++WD+ T L+ L G
Sbjct: 329 SQCSLTLSIEDG-VTTVAVSPDGKLIA-AGSLDRTVRVWDSTTGFLVERLDSGNENGNGH 386
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT-RAKFLHHLE----GHFMPVRSL 206
D V SVA+S +G +IA GS+D T+ ++ + ++ E GH V S+
Sbjct: 387 EDS------VYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSV 440
Query: 207 VYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHASWVLSVDASPDGAA----ITTG 261
+P D + S S D V +D A G L+ + GH + V+SV S + TG
Sbjct: 441 CCTP-DNEYILSGSKDRGVIFWDQASGNPLLM-LQGHRNSVISVAVSLNSKGTEGIFATG 498
Query: 262 SSDRTVKLW 270
S D ++W
Sbjct: 499 SGDCKARIW 507
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 49/168 (29%), Positives = 88/168 (52%)
Query: 161 VLSVAWSPDGRRIACGSMDGTISVFDVTR----AKFLHHLEGHF----------MPVRSL 206
V V +S DG+ IA G + T VF+VT AK + + +RS+
Sbjct: 203 VCCVRFSRDGKFIATGC-NKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSV 261
Query: 207 VYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRT 266
+SP D ++L + ++D + ++D K ++ + GH + S+D PDG + +GS DR+
Sbjct: 262 CFSP-DGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRS 320
Query: 267 VKLWDLNMRAAMQSMT-NHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
V++WDL R + S+T + D V V+ P G + + S D+++ +++
Sbjct: 321 VRIWDL--RTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWD 366
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 252 (93.8 bits), Expect = 7.4e-21, P = 7.4e-21
Identities = 81/253 (32%), Positives = 119/253 (47%)
Query: 53 ERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDP 112
+ T L + SV P G + A+ + D +R++D+ T I L +++ + F P
Sbjct: 248 DNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFP 307
Query: 113 KGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRR 172
G L V+G G SV++WD T TLSI +G V +VA SPDG+
Sbjct: 308 DGDRL-VSGSGDRSVRIWDLRTSQCSLTLSIE--DG------------VTTVAVSPDGKL 352
Query: 173 IACGSMDGTISVFDVTRAKFLHHLE-------GHFMPVRSLVYSPVDPRVLFSASDDTHV 225
IA GS+D T+ V+D T + L+ GH V S+ +S ++ S S D V
Sbjct: 353 IAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIA-SGSLDRTV 411
Query: 226 HMYDAEGKS------LVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQ 279
++ EGKS VT + GH +VLSV +PD I +GS DR V WD +
Sbjct: 412 KLWHLEGKSDKKSTCEVTYI-GHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLL 470
Query: 280 SMTNHTDQVWGVS 292
+ H + V V+
Sbjct: 471 MLQGHRNSVISVA 483
Score = 218 (81.8 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 68/240 (28%), Positives = 117/240 (48%)
Query: 82 SFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL 141
+F + D+D + +L+ S S V ++F G +A G + + ++++ T L+A L
Sbjct: 184 AFSKDLDIDM---VHSLDHS-SVVCCVRFSRDGKFIAT--GCNKTTQVFNVTTGELVAKL 237
Query: 142 SIPRPEGLKPTDKS--SSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGH 199
I D + S ++ SV +SPDG+ +A G+ D I ++D++ + + L GH
Sbjct: 238 -IDESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGH 296
Query: 200 FMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAIT 259
+ SL + P R L S S D V ++D +S V +V SPDG I
Sbjct: 297 EQDIYSLDFFPDGDR-LVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSPDGKLIA 354
Query: 260 TGSSDRTVKLWDLN-------MRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
GS DRTV++WD + + ++ H D V+ V+F G ++ S S D+++ L+
Sbjct: 355 AGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLW 414
Score = 197 (74.4 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 72/249 (28%), Positives = 114/249 (45%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL TG+ D+ +++W ++ + GH + S+ P G S S D VR++D+ T
Sbjct: 269 LLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRT 328
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ TL V + P G +A AG +V++WD+ T L+ L G
Sbjct: 329 SQCSLTLSIEDG-VTTVAVSPDGKLIA-AGSLDRTVRVWDSTTGFLVERLDSGNENGNGH 386
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT-RAKFLHHLE----GHFMPVRSL 206
D V SVA+S +G +IA GS+D T+ ++ + ++ E GH V S+
Sbjct: 387 EDS------VYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSV 440
Query: 207 VYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHASWVLSVDASPDGAA----ITTG 261
+P D + S S D V +D A G L+ + GH + V+SV S + TG
Sbjct: 441 CCTP-DNEYILSGSKDRGVIFWDQASGNPLLM-LQGHRNSVISVAVSLNSKGTEGIFATG 498
Query: 262 SSDRTVKLW 270
S D ++W
Sbjct: 499 SGDCKARIW 507
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 49/168 (29%), Positives = 88/168 (52%)
Query: 161 VLSVAWSPDGRRIACGSMDGTISVFDVTR----AKFLHHLEGHF----------MPVRSL 206
V V +S DG+ IA G + T VF+VT AK + + +RS+
Sbjct: 203 VCCVRFSRDGKFIATGC-NKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSV 261
Query: 207 VYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRT 266
+SP D ++L + ++D + ++D K ++ + GH + S+D PDG + +GS DR+
Sbjct: 262 CFSP-DGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRS 320
Query: 267 VKLWDLNMRAAMQSMT-NHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
V++WDL R + S+T + D V V+ P G + + S D+++ +++
Sbjct: 321 VRIWDL--RTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWD 366
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 257 (95.5 bits), Expect = 7.7e-21, P = 7.7e-21
Identities = 73/282 (25%), Positives = 130/282 (46%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+L+G+ E++K+W +Q RT T C + P + ++++D+ +
Sbjct: 430 VLSGAA-ESIKIWNRSTLQCIRTMT--CEYALCSFFVPGDRQVVIGTKTGKLQLYDLASG 486
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL-SIPRPEGLKP 151
+ T++A +W + P V GG SVK WD + L+ S + +K
Sbjct: 487 NLLETVDAHDGALWSLSLSPDQRGF-VTGGADKSVKFWD---FELVKDENSTQKRLSVKQ 542
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
T + VL V++SP+ + +A +D T+ +F V KF L GH +PV + S
Sbjct: 543 TRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDIS-Y 601
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
D ++ + S D +V ++ + ++ H V+ + P T DR +K WD
Sbjct: 602 DGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIKQWD 661
Query: 272 LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ +Q++ H ++W ++ P G VVS S DKS+ L+E
Sbjct: 662 ADKFEHVQTLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLWE 703
Score = 157 (60.3 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 38/147 (25%), Positives = 68/147 (46%)
Query: 167 SPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVH 226
SPDG +A G DG+I +F + + GH V SL Y + R L S S DT +
Sbjct: 74 SPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAVTSLKYDQLGGR-LASGSKDTDII 132
Query: 227 MYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTD 286
++D +S + + GH + + + + D VK WDL+ + +++ H
Sbjct: 133 VWDVINESGLYRLKGHKDAITQALFLREKNLLVSSGKDTMVKWWDLDTQHCFKTVVGHRT 192
Query: 287 QVWGVSFRPLGGRVVSVSDDKSISLYE 313
+VWG+ R+++ + D + ++
Sbjct: 193 EVWGLVLVSEEKRLITGASDSELRAWD 219
Score = 155 (59.6 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 75/306 (24%), Positives = 124/306 (40%)
Query: 24 PATETRPALLLTGSLDETVKLWRP-DDMQLERTNT----GHCLGVVSVAAHPSGIIAASA 78
P E + LL +L E ++ Q RT+ GH V +++ I S
Sbjct: 374 PQGELKAVFLLQNNLVELYSVYPSVPASQPVRTSRITIGGHRSDVRTLSFSSDNIAVLSG 433
Query: 79 SLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLI 138
+ +S +++++ T I T+ E F G V G + ++L+D A+ NL+
Sbjct: 434 AAES-IKIWNRSTLQCIRTMTC---EYALCSFFVPGDRQVVIGTKTGKLQLYDLASGNLL 489
Query: 139 ATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEG 198
T+ D + LS+ SPD R G D ++ +D K + +
Sbjct: 490 ETV-----------DAHDGALWSLSL--SPDQRGFVTGGADKSVKFWDFELVKDENSTQK 536
Query: 199 HFM--PVRSLV---------YSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVL 247
R+L YSP + S D T V ++ + ++ GH V+
Sbjct: 537 RLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCT-VKIFYVDTLKFFLSLYGHKLPVI 595
Query: 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDK 307
+D S DGA I TGS+DR VK+W L+ +S+ H D V + F P + D+
Sbjct: 596 CMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGKDR 655
Query: 308 SISLYE 313
I ++
Sbjct: 656 KIKQWD 661
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 48/189 (25%), Positives = 83/189 (43%)
Query: 84 VRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSI 143
V ++D+ I L+ EV + P G LAV G S++++ S+
Sbjct: 47 VFIWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAV-GYEDGSIRIF-----------SL 94
Query: 144 PRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPV 203
EG + K V S+ + G R+A GS D I V+DV L+ L+GH +
Sbjct: 95 LSGEG--NVTFNGHKAAVTSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAI 152
Query: 204 RSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSS 263
++ + +L S+ DT V +D + + + GH + V + + + TG+S
Sbjct: 153 TQALFLR-EKNLLVSSGKDTMVKWWDLDTQHCFKTVVGHRTEVWGLVLVSEEKRLITGAS 211
Query: 264 DRTVKLWDL 272
D ++ WD+
Sbjct: 212 DSELRAWDI 220
Score = 118 (46.6 bits), Expect = 0.00084, P = 0.00084
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90
AL+ TGS D VK+W D ++ H V+ + P + +A D ++ +D D
Sbjct: 604 ALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIKQWDAD 663
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLI 138
+ TLE E+W + P G + V+ S++LW+ LI
Sbjct: 664 KFEHVQTLEGHHQEIWCLAISPSGDYV-VSSSHDKSLRLWERTREPLI 710
Score = 94 (38.1 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 33/149 (22%), Positives = 62/149 (41%)
Query: 33 LLTGSLDETVKLWRP-DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
L +GS D + +W ++ L R GH + + S+ D+ V+ +D+DT
Sbjct: 122 LASGSKDTDIIVWDVINESGLYRLK-GHKDAITQALFLREKNLLVSSGKDTMVKWWDLDT 180
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
T+ +EVW + + L + G + ++ WD A I P P+ +K
Sbjct: 181 QHCFKTVVGHRTEVWGLVLVSEEKRL-ITGASDSELRAWDIAYLEEIEDPEEPEPKKIKG 239
Query: 152 T-----DKSSSKKFVLSVAWSPDGRRIAC 175
+ D ++ L + +P+ R + C
Sbjct: 240 SSPRMQDTDETEDGTLEMDEAPEDRILTC 268
Score = 79 (32.9 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 24/117 (20%), Positives = 52/117 (44%)
Query: 198 GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAA 257
GH VR+L +S + VL A++ + +++ + M+ + L P
Sbjct: 413 GHRSDVRTLSFSSDNIAVLSGAAES--IKIWNRSTLQCIRTMT--CEYALCSFFVPGDRQ 468
Query: 258 ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
+ G+ ++L+DL ++++ H +W +S P V+ DKS+ +++
Sbjct: 469 VVIGTKTGKLQLYDLASGNLLETVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDF 525
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 243 (90.6 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 66/234 (28%), Positives = 105/234 (44%)
Query: 80 LDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIA 139
+DS + V+ + + V + F P G LA +G +V++W
Sbjct: 1 MDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLA-SGSRDKTVRIW--------- 50
Query: 140 TLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGH 199
+P +G ++ + V SV + DG+ S D T+ V+ R KFL L H
Sbjct: 51 ---VPNVKGESTVFRAHTAT-VRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQH 106
Query: 200 FMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAIT 259
VR +SP D R++ SASDD V ++D + V + H +V VD P G I
Sbjct: 107 INWVRCAKFSP-DGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIA 165
Query: 260 TGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
D TVK+WD+ +Q H+ V G+SF P G +++ S D ++ + +
Sbjct: 166 AAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILD 219
Score = 202 (76.2 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 71/243 (29%), Positives = 104/243 (42%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL +GS D+TV++W P+ H V SV G +AS D V+V+
Sbjct: 37 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHR 96
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ +L + V +F P G L V+ +VKLWD ++ + + G
Sbjct: 97 QKFLFSLSQHINWVRCAKFSPDGR-LIVSASDDKTVKLWDKSSRECVHSYC---EHG--- 149
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
FV V + P G IA MD T+ V+DV + L H + H V L + P
Sbjct: 150 -------GFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHP- 201
Query: 212 DPRVLFSASDDTHVHMYDA-EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
L +AS D+ + + D EG+ L T + GH +V S G +G SD V +W
Sbjct: 202 SGNYLITASSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 260
Query: 271 DLN 273
N
Sbjct: 261 KSN 263
Score = 163 (62.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 42/138 (30%), Positives = 66/138 (47%)
Query: 178 MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT 237
MD + V+ + + GH V + +SP +L S S D V ++ K T
Sbjct: 1 MDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNVKGEST 59
Query: 238 AMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLG 297
H + V SV DG + T S D+TVK+W + + + S++ H + V F P G
Sbjct: 60 VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 119
Query: 298 GRVVSVSDDKSISLYEYS 315
+VS SDDK++ L++ S
Sbjct: 120 RLIVSASDDKTVKLWDKS 137
Score = 139 (54.0 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 38/124 (30%), Positives = 60/124 (48%)
Query: 20 VTWVPATETRP--ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAAS 77
+ WV + P L+++ S D+TVKLW + + H V V HPSG A+
Sbjct: 107 INWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAA 166
Query: 78 ASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNL 137
A +D+ V+V+DV T+ + + + V + F P G L A S ++K+ D L
Sbjct: 167 AGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDS-TLKILDLMEGRL 225
Query: 138 IATL 141
+ TL
Sbjct: 226 LYTL 229
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 245 (91.3 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 72/307 (23%), Positives = 142/307 (46%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS 65
L ++E H V+A+ + + A TGS D+T KLW + + T GH +V
Sbjct: 127 LHTLEG-HRNVVYAIAFNNPYGDKVA---TGSFDKTCKLWSAETGKCFYTFRGHTAEIVC 182
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
+A +P + A+ S+D+ +++DV++ ++TL +E+ + F+ G L V G
Sbjct: 183 LAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRL-VTGSFDH 241
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
+ LWD + + LS R E + V ++ D IA S+D + V+
Sbjct: 242 TAILWDVPSGRKVHVLSGHRGE-------------ISCVQFNWDCSLIATASLDKSCKVW 288
Query: 186 DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASW 245
D + L L GH V + ++ + +++D T ++ + + + GH
Sbjct: 289 DAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTS-RVFSTDTFQCLCQLEGHKGE 347
Query: 246 VLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSD 305
+ V + G+ + T S D+T ++W + A +Q + H+D+++ +F G +++ S
Sbjct: 348 ISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSK 407
Query: 306 DKSISLY 312
D + ++
Sbjct: 408 DNTCRIW 414
Score = 231 (86.4 bits), Expect = 7.4e-19, P = 7.4e-19
Identities = 73/277 (26%), Positives = 124/277 (44%)
Query: 33 LLTGSLDETVKLWRPDDMQ--LERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90
LL L E K+ + D+ + L R H L + +VA + SG + S D +++D
Sbjct: 65 LLICKLQE--KVGQKDERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTA 122
Query: 91 TNASIATLEASPSEVWQMQFD-PKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGL 149
+ + TLE + V+ + F+ P G +A G + KLW T T E
Sbjct: 123 SGEELHTLEGHRNVVYAIAFNNPYGDKVAT-GSFDKTCKLWSAETGKCFYTFRGHTAE-- 179
Query: 150 KPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS 209
++ +A++P +A GSMD T ++DV + + L GHF + SL ++
Sbjct: 180 -----------IVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFN 228
Query: 210 PVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKL 269
R++ + D T + ++D V +SGH + V + D + I T S D++ K+
Sbjct: 229 TTGDRLVTGSFDHTAI-LWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKV 287
Query: 270 WDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDD 306
WD + ++ H D+V V F G + + S D
Sbjct: 288 WDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASAD 324
Score = 183 (69.5 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 54/217 (24%), Positives = 100/217 (46%)
Query: 98 LEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSS 157
L+A + + F+ G+ + G + K+WDTA+ + TL EG
Sbjct: 88 LQAHILPLTNVAFNKSGSCF-ITGSYDRTCKIWDTASGEELHTL-----EG--------H 133
Query: 158 KKFVLSVAWS-PDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVL 216
+ V ++A++ P G ++A GS D T ++ K + GH + L ++P V
Sbjct: 134 RNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVA 193
Query: 217 FSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRA 276
+ S DT ++D E V+ ++GH + ++S+ + G + TGS D T LWD+
Sbjct: 194 -TGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGR 252
Query: 277 AMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ ++ H ++ V F + + S DKS +++
Sbjct: 253 KVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWD 289
>POMBASE|SPBC3D6.12 [details] [associations]
symbol:dip2 "U3 snoRNA associated protein Dip2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0030515
"snoRNA binding" evidence=ISO] [GO:0032040 "small-subunit
processome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC3D6.12 GO:GO:0005829 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032040 GO:GO:0030490
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 PIR:T40372 RefSeq:NP_595524.1
ProteinModelPortal:P87177 STRING:P87177 EnsemblFungi:SPBC3D6.12.1
GeneID:2540971 KEGG:spo:SPBC3D6.12 NextBio:20802086 Uniprot:P87177
Length = 922
Score = 253 (94.1 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 79/285 (27%), Positives = 136/285 (47%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERT-NTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90
++L+G+ + ++KLW RT G+ L S + I++A S + + V+D+
Sbjct: 410 VILSGA-NGSLKLWNKKTTSCIRTIECGYVLAA-SFINNDKCIVSAYKSGE--LEVYDIA 465
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT-ATWNLI-ATLSIPRPEG 148
+++ I ++A +W + GT A A +VKLW ++++ + T
Sbjct: 466 SSSLIERIQAHDGAIWDLAVGHDGTYFATASADH-TVKLWSLKSSFDFVPGTTRKVTTLK 524
Query: 149 LKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVY 208
L+ T + VL+V SPDGR +A +D T+ V+ + KF +L GH +PV S+
Sbjct: 525 LEQTRQIDFTDDVLAVKISPDGRFVAASLLDNTVKVYYLDSLKFFLNLYGHKLPVLSMDI 584
Query: 209 SPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVK 268
S D ++L + S D +V ++ + ++ H ++ V PD T S DR V+
Sbjct: 585 S-YDSKLLVTCSADKNVKIWGLDFGDCHKSIFAHQDSIMEVTFQPDTYNFFTCSKDREVR 643
Query: 269 LWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
WD + + H +VW ++ P VVS S D SI L+E
Sbjct: 644 YWDGKSFDLILKLRGHHSEVWALAVGPTF--VVSGSHDHSIRLWE 686
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 72/323 (22%), Positives = 136/323 (42%)
Query: 19 AVTWVPATETRPALLLTGSLDETVKLW----RPDDMQLERTNTGHCLGVVSVAAHPSGI- 73
+V W+P T P L+ T + +++++ + + T + + + H + +
Sbjct: 343 SVAWIPGNRT-PTLV-TSLQNNSIEVYALDVKSEGSAAPLTERASRISAIEIPGHRADVR 400
Query: 74 -IAASASLDSFV-------RVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
+A SA+ D + ++++ T + I T+E V F + V+ S
Sbjct: 401 TLALSANHDVILSGANGSLKLWNKKTTSCIRTIECG--YVLAASFINNDKCI-VSAYKSG 457
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTI--- 182
++++D A+ +LI E ++ D + + +A DG A S D T+
Sbjct: 458 ELEVYDIASSSLI--------ERIQAHDGA-----IWDLAVGHDGTYFATASADHTVKLW 504
Query: 183 ---SVFD--------VTRAKFLHHLEGHFMP-VRSLVYSPVDPRVLFSASDDTHVHMYDA 230
S FD VT K + F V ++ SP D R + ++ D V +Y
Sbjct: 505 SLKSSFDFVPGTTRKVTTLKLEQTRQIDFTDDVLAVKISP-DGRFVAASLLDNTVKVYYL 563
Query: 231 EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWG 290
+ + GH VLS+D S D + T S+D+ VK+W L+ +S+ H D +
Sbjct: 564 DSLKFFLNLYGHKLPVLSMDISYDSKLLVTCSADKNVKIWGLDFGDCHKSIFAHQDSIME 623
Query: 291 VSFRPLGGRVVSVSDDKSISLYE 313
V+F+P + S D+ + ++
Sbjct: 624 VTFQPDTYNFFTCSKDREVRYWD 646
Score = 119 (46.9 bits), Expect = 0.00063, P = 0.00063
Identities = 41/159 (25%), Positives = 75/159 (47%)
Query: 158 KKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLF 217
K V ++ + G R+A GSMD I V+D+ L L GH + L++ + P
Sbjct: 104 KSAVTTMDFDKMGTRLASGSMDTDIIVWDIVAETGLFRLRGHKDQITKLLF--ITPPSKN 161
Query: 218 SASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDA-SPDGAAITTGSSDRTVKLWDLNMRA 276
+A ++T V D + SG + VD+ S D ++ G D +KLWDL+++
Sbjct: 162 TA-EETVVDT-DID--------SGD----MDVDSKSSDSFLLSVGK-DSFMKLWDLSIQH 206
Query: 277 AMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
+++ +H ++W + P R ++ + ++E S
Sbjct: 207 CVETHVDHQGEIWAMCVSPDAKRCLTAGTGSDVKVWEIS 245
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 248 (92.4 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 74/262 (28%), Positives = 119/262 (45%)
Query: 13 HEESVWAVTWVPAT----ETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAA 68
H +V A+ + P + + + L + + D +VKLW D + GH + V V
Sbjct: 271 HNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMW 330
Query: 69 HPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVK 128
HPSG + D R++D++ I E V+ + F G+ LA GG A +
Sbjct: 331 HPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS-LAGTGGLDAFGR 389
Query: 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 188
+WD T I L EG K + +++SP+G IA GS D T V+D+
Sbjct: 390 VWDLRTGRCIMFL-----EG--------HLKEIYGISFSPNGYHIATGSGDNTCKVWDLR 436
Query: 189 RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248
+ + ++ + H V + + P+ L + + D ++ G S + ++GH V+
Sbjct: 437 QRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMG 496
Query: 249 VDASPDGAAITTGSSDRTVKLW 270
+D S DG I T S DRT KLW
Sbjct: 497 LDISSDGQLIATCSYDRTFKLW 518
Score = 212 (79.7 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 68/290 (23%), Positives = 121/290 (41%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIA--------ASASLDSF 83
+L T KLW D L T GH V ++ HP ++ AS + D
Sbjct: 244 MLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGS 303
Query: 84 VRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSI 143
V+++ +D++ +A +E V ++ + P G L G + + W W+L A I
Sbjct: 304 VKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFL----GTTCYDRSW--RLWDLEAQEEI 357
Query: 144 PRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPV 203
EG V +A+ DG G +D V+D+ + + LEGH +
Sbjct: 358 LHQEG--------HSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEI 409
Query: 204 RSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASP-DGAAITTGS 262
+ +SP + + D+T ++D + V + H + V V P G + TG+
Sbjct: 410 YGISFSPNGYHIATGSGDNT-CKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGA 468
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
D T K+W + ++++ H +V G+ G + + S D++ L+
Sbjct: 469 YDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 194 (73.4 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 56/229 (24%), Positives = 96/229 (41%)
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
P+ + A+A +++ V + + TL + V + F PK T V L
Sbjct: 240 PNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSL----DQKDVNL 295
Query: 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
A + S+ E + + + + V V W P GR + D + ++D+
Sbjct: 296 ASCAADGSVKLWSLDSDEPVADIEGHTVR--VARVMWHPSGRFLGTTCYDRSWRLWDLEA 353
Query: 190 AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSV 249
+ + H EGH M V + + D + + D ++D + + GH + +
Sbjct: 354 QEEILHQEGHSMGVYDIAFHQ-DGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGI 412
Query: 250 DASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGG 298
SP+G I TGS D T K+WDL R + ++ H + V GV F P+ G
Sbjct: 413 SFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHG 461
Score = 160 (61.4 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 48/204 (23%), Positives = 88/204 (43%)
Query: 110 FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169
F P LA A S KLW +L+ TL R K +S+ D
Sbjct: 238 FSPNSKMLATACW-SGLCKLWSVPDCSLLHTL---RGHNTNVGAIVFHPKSTVSLD-QKD 292
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
+C + DG++ ++ + + + +EGH + V +++ P R L + D ++D
Sbjct: 293 VNLASCAA-DGSVKLWSLDSDEPVADIEGHTVRVARVMWHP-SGRFLGTTCYDRSWRLWD 350
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
E + + GH+ V + DG+ TG D ++WDL + + H +++
Sbjct: 351 LEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIY 410
Query: 290 GVSFRPLGGRVVSVSDDKSISLYE 313
G+SF P G + + S D + +++
Sbjct: 411 GISFSPNGYHIATGSGDNTCKVWD 434
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 248 (92.4 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 74/262 (28%), Positives = 118/262 (45%)
Query: 13 HEESVWAVTWVPAT----ETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAA 68
H +V A+ + P + + + L + + D +VKLW D + GH + V V
Sbjct: 271 HNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTW 330
Query: 69 HPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVK 128
HPSG + D R++D++ I E V+ + F G+ LA GG A +
Sbjct: 331 HPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS-LAGTGGLDAFGR 389
Query: 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 188
+WD T I L EG K + + +SP+G IA GS D T V+D+
Sbjct: 390 VWDLRTGRCIMFL-----EG--------HLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 436
Query: 189 RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248
+ + ++ + H V + + P+ L + + D ++ G S + ++GH V+
Sbjct: 437 QRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMG 496
Query: 249 VDASPDGAAITTGSSDRTVKLW 270
+D S DG I T S DRT KLW
Sbjct: 497 LDISSDGQLIATCSYDRTFKLW 518
Score = 210 (79.0 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 68/290 (23%), Positives = 121/290 (41%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIA--------ASASLDSF 83
+L T KLW D L T GH V ++ HP ++ AS + D
Sbjct: 244 MLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGS 303
Query: 84 VRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSI 143
V+++ +D++ +A +E V ++ + P G L G + + W W+L A I
Sbjct: 304 VKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFL----GTTCYDRSW--RLWDLEAQEEI 357
Query: 144 PRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPV 203
EG V +A+ DG G +D V+D+ + + LEGH +
Sbjct: 358 LHQEG--------HSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEI 409
Query: 204 RSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASP-DGAAITTGS 262
+ +SP + + D+T ++D + V + H + V V P G + TG+
Sbjct: 410 YGINFSPNGYHIATGSGDNT-CKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGA 468
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
D T K+W + ++++ H +V G+ G + + S D++ L+
Sbjct: 469 YDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 194 (73.4 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 58/230 (25%), Positives = 98/230 (42%)
Query: 70 PSGIIAASASLDSFVRVFDV-DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVK 128
P+ + A+A +++ V D N + TL + V + F PK T V
Sbjct: 240 PNSKMLATACWSGLCKLWSVPDCNL-LHTLRGHNTNVGAIVFHPKSTVSL----DQKDVN 294
Query: 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 188
L A + S+ E + + + + V V W P GR + D + ++D+
Sbjct: 295 LASCAADGSVKLWSLDSDEPVADIEGHTVR--VARVTWHPSGRFLGTTCYDRSWRLWDLE 352
Query: 189 RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248
+ + H EGH M V + + D + + D ++D + + GH +
Sbjct: 353 AQEEILHQEGHSMGVYDIAFHQ-DGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYG 411
Query: 249 VDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGG 298
++ SP+G I TGS D T K+WDL R + ++ H + V GV F P+ G
Sbjct: 412 INFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHG 461
Score = 161 (61.7 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 48/204 (23%), Positives = 87/204 (42%)
Query: 110 FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169
F P LA A S KLW NL+ TL R K +S+ D
Sbjct: 238 FSPNSKMLATACW-SGLCKLWSVPDCNLLHTL---RGHNTNVGAIVFHPKSTVSLD-QKD 292
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
+C + DG++ ++ + + + +EGH + V + + P R L + D ++D
Sbjct: 293 VNLASCAA-DGSVKLWSLDSDEPVADIEGHTVRVARVTWHP-SGRFLGTTCYDRSWRLWD 350
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
E + + GH+ V + DG+ TG D ++WDL + + H +++
Sbjct: 351 LEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIY 410
Query: 290 GVSFRPLGGRVVSVSDDKSISLYE 313
G++F P G + + S D + +++
Sbjct: 411 GINFSPNGYHIATGSGDNTCKVWD 434
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 87/312 (27%), Positives = 130/312 (41%)
Query: 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPD-DMQLERTNTGHCLGVVSVAAH 69
+ H +V+ + + PA L+ +GS D + LWR D + GH ++ +
Sbjct: 50 SGHPSAVYTMKFNPAG----TLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWT 105
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
G SAS D VR +DV+T I + S V +G L ++G + KL
Sbjct: 106 SDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKL 165
Query: 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
WD I T P DK + +V++S +I G +D + V+D+ +
Sbjct: 166 WDMRQRGAIQTF---------P-DKYQ----ITAVSFSDAADKIFTGGVDNDVKVWDLRK 211
Query: 190 AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD----AEGKSLVTAMSGHA-- 243
+ LEGH + + SP D L + D + ++D A V GH
Sbjct: 212 GEATMTLEGHQDTITGMSLSP-DGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHN 270
Query: 244 --SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301
+L SPDG +T GSSDR V +WD R + + HT V F P +
Sbjct: 271 FEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIG 330
Query: 302 SVSDDKSISLYE 313
S S DK+I L E
Sbjct: 331 SCSSDKNIYLGE 342
Score = 190 (71.9 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 57/221 (25%), Positives = 93/221 (42%)
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
A I L PS V+ M+F+P GT +A +G + LW + LK
Sbjct: 44 APIMLLSGHPSAVYTMKFNPAGTLIA-SGSHDREIFLW--RVHGDCKNFMV-----LK-- 93
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
K +L + W+ DG +I S D T+ +DV K + + H V S +
Sbjct: 94 ---GHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRG 150
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
P ++ S SDD ++D + + + +V S I TG D VK+WDL
Sbjct: 151 PPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKVWDL 209
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
A ++ H D + G+S P G +++ D + +++
Sbjct: 210 RKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWD 250
Score = 118 (46.6 bits), Expect = 0.00020, P = 0.00020
Identities = 59/273 (21%), Positives = 114/273 (41%)
Query: 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAA 68
V H+ ++ + W + + +++ S D+TV+ W + + + H V S
Sbjct: 91 VLKGHKNAILDLHWT----SDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCP 146
Query: 69 HPSGI-IAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
G + S S D +++D+ +I T ++ + F + GG V
Sbjct: 147 TRRGPPLIISGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDAADKI-FTGGVDNDV 204
Query: 128 KLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 187
K+WD AT+++ EG + T + ++ SPDG + MD + V+D+
Sbjct: 205 KVWDLRKGE--ATMTL---EGHQDT--------ITGMSLSPDGSYLLTNGMDNKLCVWDM 251
Query: 188 T----RAKFLHHLEGHFMPV-RSLV---YSPVDPRVLFSASDDTHVHMYDAEGKSLVTAM 239
+ + + EGH ++L+ +SP +V + S D VH++D + + +
Sbjct: 252 RPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVT-AGSSDRMVHIWDTTSRRTIYKL 310
Query: 240 SGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
GH V P I + SSD+ + L ++
Sbjct: 311 PGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI 343
>UNIPROTKB|G4MTR1 [details] [associations]
symbol:MGG_04746 "DOM34-interacting protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR007148 Pfam:PF04003 KO:K14556 RefSeq:XP_003713707.1
ProteinModelPortal:G4MTR1 EnsemblFungi:MGG_04746T0 GeneID:2678069
KEGG:mgr:MGG_04746 Uniprot:G4MTR1
Length = 968
Score = 252 (93.8 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 74/289 (25%), Positives = 131/289 (45%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+L + + ++K+W RT C + A P + + + +FDV +
Sbjct: 445 MLATAANGSLKIWNVRTQACIRTF--ECGYALCCAFLPGDKVVVVGTKTGELELFDVAST 502
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWN---LIATLSIPRPEGL 149
A + ++ A +W + P G ++ V G S K WD L T + P+ + L
Sbjct: 503 ALLDSVTAHDGAIWSLHVHPDGRSV-VTGSADKSAKFWDFRIVQEPVLGTTRTTPKLK-L 560
Query: 150 KPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS 209
T +LS+ +SPD + +A +D T+ VF K +L GH +PV S+ S
Sbjct: 561 VQTRVLKVSDDILSLKFSPDAKMLAVALLDSTVKVFFADSLKLYLNLYGHKLPVLSMDIS 620
Query: 210 PVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSV-----DASPDGAAITTGSSD 264
D +++ ++S D ++ ++ + ++ GH VL V +A +G + S D
Sbjct: 621 -YDSKLIITSSADKNIKIWGLDFGDCHKSLFGHQDSVLQVAFIPHNAEGNGHHFFSTSKD 679
Query: 265 RTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
R +K WD + +Q + H +VW ++ G +VS S DKSI ++E
Sbjct: 680 RVIKYWDGDKFEQIQRLHGHHGEVWALAVSHSGNFIVSASHDKSIRVWE 728
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 82/332 (24%), Positives = 143/332 (43%)
Query: 19 AVTWVPATETRPALLLTGSLDETVKLW-----RPDDMQLERTNT------------GHCL 61
+V W T+ L+ G+ + ++LW + + + ++ N GH
Sbjct: 373 SVDWALTHGTKDLQLVVGTTNNQIELWHVTTTKDKEKKSKKENAEDYTRALSIELPGHRA 432
Query: 62 GVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAG 121
+ ++A + A+A+ S +++++V T A I T E + F P G + V G
Sbjct: 433 DIRAIALSSDDRMLATAANGS-LKIWNVRTQACIRTFECGYALC--CAFLP-GDKVVVVG 488
Query: 122 GGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGT 181
+ ++L+D A+ L+ S+ +G + S+ PDGR + GS D +
Sbjct: 489 TKTGELELFDVASTALLD--SVTAHDGA-----------IWSLHVHPDGRSVVTGSADKS 535
Query: 182 ISVFD----------VTRAK-FLHHLEGHFMPVR----SLVYSPVDPRVLFSASDDTHVH 226
+D TR L ++ + V SL +SP D ++L A D+ V
Sbjct: 536 AKFWDFRIVQEPVLGTTRTTPKLKLVQTRVLKVSDDILSLKFSP-DAKMLAVALLDSTVK 594
Query: 227 MYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTD 286
++ A+ L + GH VLS+D S D I T S+D+ +K+W L+ +S+ H D
Sbjct: 595 VFFADSLKLYLNLYGHKLPVLSMDISYDSKLIITSSADKNIKIWGLDFGDCHKSLFGHQD 654
Query: 287 QVWGVSFRPL-----GGRVVSVSDDKSISLYE 313
V V+F P G S S D+ I ++
Sbjct: 655 SVLQVAFIPHNAEGNGHHFFSTSKDRVIKYWD 686
Score = 113 (44.8 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 31/129 (24%), Positives = 62/129 (48%)
Query: 186 DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASW 245
D TRA + L GH +R++ S D R+L +A++ + + +++ ++ + +
Sbjct: 418 DYTRALSIE-LPGHRADIRAIALSS-DDRMLATAANGS-LKIWNVRTQACIRTFE--CGY 472
Query: 246 VLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSD 305
L P + G+ ++L+D+ A + S+T H +W + P G VV+ S
Sbjct: 473 ALCCAFLPGDKVVVVGTKTGELELFDVASTALLDSVTAHDGAIWSLHVHPDGRSVVTGSA 532
Query: 306 DKSISLYEY 314
DKS +++
Sbjct: 533 DKSAKFWDF 541
Score = 70 (29.7 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 25/104 (24%), Positives = 45/104 (43%)
Query: 14 EESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGI 73
E+S VT + ++T + G D +++LW + + GH + +A SG
Sbjct: 64 EKSKAQVTAIAQSKTDRDVFAVGYEDGSIRLWDSKIATIIVSFNGHRTAITHLAFDKSGT 123
Query: 74 IAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQF-DPKGTT 116
AS S D+ V V+D+ L ++ + F +P+ T
Sbjct: 124 RLASGSKDTDVIVWDLVAEVGQYKLRGHKDQITGLCFIEPEPQT 167
Score = 60 (26.2 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 81 DSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWD 131
D +R++D I + + + + FD GT LA +G V +WD
Sbjct: 89 DGSIRLWDSKIATIIVSFNGHRTAITHLAFDKSGTRLA-SGSKDTDVIVWD 138
Score = 57 (25.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 25/104 (24%), Positives = 44/104 (42%)
Query: 14 EESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVV-SVAAHPSG 72
E++ A V E LLT + D +KLW T+ G ++ +P
Sbjct: 171 EDAEEAQAMVVDNEGSEGFLLTTAKDSLIKLWDLSSRFCIETHVAQTNGECWALGVNPDF 230
Query: 73 IIAASASLDSFVRVFDVDTNASIA-TLEASPSEVWQMQFDPKGT 115
+A D ++V+ +D A ++ T E S + ++ D +GT
Sbjct: 231 SCCVTAGNDGELKVWFIDLVALLSSTREVEVSHMGKILRD-RGT 273
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 247 (92.0 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 74/262 (28%), Positives = 118/262 (45%)
Query: 13 HEESVWAVTWVPAT----ETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAA 68
H +V A+ + P + + + L + + D +VKLW D + GH + V V
Sbjct: 272 HNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMW 331
Query: 69 HPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVK 128
HPSG + D R++D++ I E V+ + F G+ LA GG A +
Sbjct: 332 HPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS-LAGTGGLDAFGR 390
Query: 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 188
+WD T I L EG K + + +SP+G IA GS D T V+D+
Sbjct: 391 VWDLRTGRCIMFL-----EG--------HLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 437
Query: 189 RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248
+ + ++ + H V + + P+ L + + D ++ G S + ++GH V+
Sbjct: 438 QRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMG 497
Query: 249 VDASPDGAAITTGSSDRTVKLW 270
+D S DG I T S DRT KLW
Sbjct: 498 LDISSDGQLIATCSYDRTFKLW 519
Score = 211 (79.3 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 68/290 (23%), Positives = 121/290 (41%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIA--------ASASLDSF 83
+L T KLW D L T GH V ++ HP ++ AS + D
Sbjct: 245 MLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGS 304
Query: 84 VRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSI 143
V+++ +D++ +A +E V ++ + P G L G + + W W+L A I
Sbjct: 305 VKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFL----GTTCYDRSW--RLWDLEAQEEI 358
Query: 144 PRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPV 203
EG V +A+ DG G +D V+D+ + + LEGH +
Sbjct: 359 LHQEG--------HSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEI 410
Query: 204 RSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASP-DGAAITTGS 262
+ +SP + + D+T ++D + V + H + V V P G + TG+
Sbjct: 411 YGINFSPNGYHIATGSGDNT-CKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGA 469
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
D T K+W + ++++ H +V G+ G + + S D++ L+
Sbjct: 470 YDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 519
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 58/230 (25%), Positives = 98/230 (42%)
Query: 70 PSGIIAASASLDSFVRVFDV-DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVK 128
P+ + A+A +++ V D N + TL + V + F PK T V
Sbjct: 241 PNSKMLATACWSGLCKLWSVPDCNL-LHTLRGHNTNVGAIVFHPKSTVSL----DPKDVN 295
Query: 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 188
L A + S+ E + + + + V V W P GR + D + ++D+
Sbjct: 296 LASCAADGSVKLWSLDSDEPVADIEGHTVR--VARVMWHPSGRFLGTTCYDRSWRLWDLE 353
Query: 189 RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248
+ + H EGH M V + + D + + D ++D + + GH +
Sbjct: 354 AQEEILHQEGHSMGVYDIAFHQ-DGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYG 412
Query: 249 VDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGG 298
++ SP+G I TGS D T K+WDL R + ++ H + V GV F P+ G
Sbjct: 413 INFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHG 462
Score = 165 (63.1 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 48/204 (23%), Positives = 88/204 (43%)
Query: 110 FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169
F P LA A S KLW NL+ TL R K +S+ P
Sbjct: 239 FSPNSKMLATACW-SGLCKLWSVPDCNLLHTL---RGHNTNVGAIVFHPKSTVSL--DPK 292
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
+A + DG++ ++ + + + +EGH + V +++ P R L + D ++D
Sbjct: 293 DVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHP-SGRFLGTTCYDRSWRLWD 351
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
E + + GH+ V + DG+ TG D ++WDL + + H +++
Sbjct: 352 LEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIY 411
Query: 290 GVSFRPLGGRVVSVSDDKSISLYE 313
G++F P G + + S D + +++
Sbjct: 412 GINFSPNGYHIATGSGDNTCKVWD 435
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 247 (92.0 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 74/262 (28%), Positives = 118/262 (45%)
Query: 13 HEESVWAVTWVPAT----ETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAA 68
H +V A+ + P + + + L + + D +VKLW D + GH + V V
Sbjct: 287 HNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMW 346
Query: 69 HPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVK 128
HPSG + D R++D++ I E V+ + F G+ LA GG A +
Sbjct: 347 HPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS-LAGTGGLDAFGR 405
Query: 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 188
+WD T I L EG K + + +SP+G IA GS D T V+D+
Sbjct: 406 VWDLRTGRCIMFL-----EG--------HLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 452
Query: 189 RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248
+ + ++ + H V + + P+ L + + D ++ G S + ++GH V+
Sbjct: 453 QRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMG 512
Query: 249 VDASPDGAAITTGSSDRTVKLW 270
+D S DG I T S DRT KLW
Sbjct: 513 LDISSDGQLIATCSYDRTFKLW 534
Score = 211 (79.3 bits), Expect = 6.8e-15, P = 6.8e-15
Identities = 68/290 (23%), Positives = 121/290 (41%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIA--------ASASLDSF 83
+L T KLW D L T GH V ++ HP ++ AS + D
Sbjct: 260 MLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGS 319
Query: 84 VRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSI 143
V+++ +D++ +A +E V ++ + P G L G + + W W+L A I
Sbjct: 320 VKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFL----GTTCYDRSW--RLWDLEAQEEI 373
Query: 144 PRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPV 203
EG V +A+ DG G +D V+D+ + + LEGH +
Sbjct: 374 LHQEG--------HSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEI 425
Query: 204 RSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASP-DGAAITTGS 262
+ +SP + + D+T ++D + V + H + V V P G + TG+
Sbjct: 426 YGINFSPNGYHIATGSGDNT-CKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGA 484
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
D T K+W + ++++ H +V G+ G + + S D++ L+
Sbjct: 485 YDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 534
Score = 193 (73.0 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 58/230 (25%), Positives = 98/230 (42%)
Query: 70 PSGIIAASASLDSFVRVFDV-DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVK 128
P+ + A+A +++ V D N + TL + V + F PK T V
Sbjct: 256 PNSKMLATACWSGLCKLWSVPDCNL-LHTLRGHNTNVGAIVFHPKSTVSL----DQKDVN 310
Query: 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 188
L A + S+ E + + + + V V W P GR + D + ++D+
Sbjct: 311 LASCAADGSVKLWSLDSDEPVADIEGHTVR--VARVMWHPSGRFLGTTCYDRSWRLWDLE 368
Query: 189 RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248
+ + H EGH M V + + D + + D ++D + + GH +
Sbjct: 369 AQEEILHQEGHSMGVYDIAFHQ-DGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYG 427
Query: 249 VDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGG 298
++ SP+G I TGS D T K+WDL R + ++ H + V GV F P+ G
Sbjct: 428 INFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHG 477
Score = 162 (62.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 48/204 (23%), Positives = 88/204 (43%)
Query: 110 FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169
F P LA A S KLW NL+ TL R K +S+ D
Sbjct: 254 FSPNSKMLATACW-SGLCKLWSVPDCNLLHTL---RGHNTNVGAIVFHPKSTVSLD-QKD 308
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
+C + DG++ ++ + + + +EGH + V +++ P R L + D ++D
Sbjct: 309 VNLASCAA-DGSVKLWSLDSDEPVADIEGHTVRVARVMWHP-SGRFLGTTCYDRSWRLWD 366
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
E + + GH+ V + DG+ TG D ++WDL + + H +++
Sbjct: 367 LEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIY 426
Query: 290 GVSFRPLGGRVVSVSDDKSISLYE 313
G++F P G + + S D + +++
Sbjct: 427 GINFSPNGYHIATGSGDNTCKVWD 450
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 247 (92.0 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 74/262 (28%), Positives = 118/262 (45%)
Query: 13 HEESVWAVTWVPAT----ETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAA 68
H +V A+ + P + + + L + + D +VKLW D + GH + V V
Sbjct: 289 HNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMW 348
Query: 69 HPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVK 128
HPSG + D R++D++ I E V+ + F G+ LA GG A +
Sbjct: 349 HPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS-LAGTGGLDAFGR 407
Query: 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 188
+WD T I L EG K + + +SP+G IA GS D T V+D+
Sbjct: 408 VWDLRTGRCIMFL-----EG--------HLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 454
Query: 189 RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248
+ + ++ + H V + + P+ L + + D ++ G S + ++GH V+
Sbjct: 455 QRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMG 514
Query: 249 VDASPDGAAITTGSSDRTVKLW 270
+D S DG I T S DRT KLW
Sbjct: 515 LDISSDGQLIATCSYDRTFKLW 536
Score = 211 (79.3 bits), Expect = 6.8e-15, P = 6.8e-15
Identities = 68/290 (23%), Positives = 121/290 (41%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIA--------ASASLDSF 83
+L T KLW D L T GH V ++ HP ++ AS + D
Sbjct: 262 MLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGS 321
Query: 84 VRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSI 143
V+++ +D++ +A +E V ++ + P G L G + + W W+L A I
Sbjct: 322 VKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFL----GTTCYDRSW--RLWDLEAQEEI 375
Query: 144 PRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPV 203
EG V +A+ DG G +D V+D+ + + LEGH +
Sbjct: 376 LHQEG--------HSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEI 427
Query: 204 RSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASP-DGAAITTGS 262
+ +SP + + D+T ++D + V + H + V V P G + TG+
Sbjct: 428 YGINFSPNGYHIATGSGDNT-CKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGA 486
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
D T K+W + ++++ H +V G+ G + + S D++ L+
Sbjct: 487 YDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 536
Score = 193 (73.0 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 58/230 (25%), Positives = 98/230 (42%)
Query: 70 PSGIIAASASLDSFVRVFDV-DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVK 128
P+ + A+A +++ V D N + TL + V + F PK T V
Sbjct: 258 PNSKMLATACWSGLCKLWSVPDCNL-LHTLRGHNTNVGAIVFHPKSTVSL----DQKDVN 312
Query: 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 188
L A + S+ E + + + + V V W P GR + D + ++D+
Sbjct: 313 LASCAADGSVKLWSLDSDEPVADIEGHTVR--VARVMWHPSGRFLGTTCYDRSWRLWDLE 370
Query: 189 RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248
+ + H EGH M V + + D + + D ++D + + GH +
Sbjct: 371 AQEEILHQEGHSMGVYDIAFHQ-DGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYG 429
Query: 249 VDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGG 298
++ SP+G I TGS D T K+WDL R + ++ H + V GV F P+ G
Sbjct: 430 INFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHG 479
Score = 162 (62.1 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 48/204 (23%), Positives = 88/204 (43%)
Query: 110 FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169
F P LA A S KLW NL+ TL R K +S+ D
Sbjct: 256 FSPNSKMLATACW-SGLCKLWSVPDCNLLHTL---RGHNTNVGAIVFHPKSTVSLD-QKD 310
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
+C + DG++ ++ + + + +EGH + V +++ P R L + D ++D
Sbjct: 311 VNLASCAA-DGSVKLWSLDSDEPVADIEGHTVRVARVMWHP-SGRFLGTTCYDRSWRLWD 368
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
E + + GH+ V + DG+ TG D ++WDL + + H +++
Sbjct: 369 LEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIY 428
Query: 290 GVSFRPLGGRVVSVSDDKSISLYE 313
G++F P G + + S D + +++
Sbjct: 429 GINFSPNGYHIATGSGDNTCKVWD 452
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 250 (93.1 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 72/282 (25%), Positives = 128/282 (45%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+L+ + D ++K+W +Q RT T C + P + ++++D+ +
Sbjct: 430 VLSAAAD-SIKIWNRSTLQCIRTMT--CEYALCSFFVPGDRQVVIGTKTGKLQLYDLASG 486
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL-SIPRPEGLKP 151
+ T++A +W M P V GG SVK WD + L+ S + +K
Sbjct: 487 NLLETIDAHDGALWSMSLSPDQRGF-VTGGADKSVKFWD---FELVKDENSTQKRLSVKQ 542
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
T + VL V++SP+ + +A +D T+ +F V KF L GH +PV + S
Sbjct: 543 TRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISH- 601
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
D ++ + S D +V ++ + ++ H V+ + P T D +K WD
Sbjct: 602 DGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWD 661
Query: 272 LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ +Q++ H ++W ++ P G VVS S DKS+ L+E
Sbjct: 662 ADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE 703
Score = 166 (63.5 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 40/156 (25%), Positives = 73/156 (46%)
Query: 158 KKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLF 217
K+ V + SPDG +A G DG+I +F + + GH + +L Y + R L
Sbjct: 65 KQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITTLKYDQLGGR-LA 123
Query: 218 SASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA 277
S S DT + ++D +S + + GH + + + T D VK WDL+ +
Sbjct: 124 SGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQHC 183
Query: 278 MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
++M H +VWG+ R+++ + D + +++
Sbjct: 184 FKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVWD 219
Score = 165 (63.1 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 78/306 (25%), Positives = 125/306 (40%)
Query: 24 PATETRPALLLTGSLDETVKLW----RPDDMQLER-TNTGHCLGVVSVAAHPSGIIAASA 78
P E + LL +L E L P ++ R T GH V +++ I SA
Sbjct: 374 PHGELKAVFLLQNNLVELYSLNPSLPTPQPVRTSRITIGGHRSDVRTLSFSSDNIAVLSA 433
Query: 79 SLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLI 138
+ DS +++++ T I T+ E F G V G + ++L+D A+ NL+
Sbjct: 434 AADS-IKIWNRSTLQCIRTMTC---EYALCSFFVPGDRQVVIGTKTGKLQLYDLASGNLL 489
Query: 139 ATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEG 198
T I +G + S++ SPD R G D ++ +D K + +
Sbjct: 490 ET--IDAHDGA-----------LWSMSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQK 536
Query: 199 HFM--PVRSLV---------YSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVL 247
R+L YSP + S D T V ++ + ++ GH V+
Sbjct: 537 RLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCT-VKIFYVDTLKFFLSLYGHKLPVI 595
Query: 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDK 307
+D S DGA I TGS+DR VK+W L+ +S+ H D V + F P + D
Sbjct: 596 CMDISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDH 655
Query: 308 SISLYE 313
I ++
Sbjct: 656 KIKQWD 661
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 46/189 (24%), Positives = 84/189 (44%)
Query: 84 VRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSI 143
V ++D+ I L+ EV + P G LAV G S++++ S+
Sbjct: 47 VFIWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAV-GYEDGSIRIF-----------SL 94
Query: 144 PRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPV 203
EG + K + ++ + G R+A GS D I V+DV L+ L+GH +
Sbjct: 95 LSGEG--NVTFNGHKAAITTLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAI 152
Query: 204 RSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSS 263
++ + +L ++ DT V +D + + M GH + V + + + TG+S
Sbjct: 153 TQALFLR-EKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLLSEEKRLITGAS 211
Query: 264 DRTVKLWDL 272
D +++WD+
Sbjct: 212 DSELRVWDI 220
Score = 118 (46.6 bits), Expect = 0.00084, P = 0.00084
Identities = 31/108 (28%), Positives = 49/108 (45%)
Query: 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90
AL+ TGS D VK+W D ++ H V+ + P + +A D ++ +D D
Sbjct: 604 ALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDAD 663
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLI 138
I TLE E+W + P G + V+ S++LW+ LI
Sbjct: 664 KFEHIQTLEGHHQEIWCLAVSPSGDYV-VSSSHDKSLRLWERTREPLI 710
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 245 (91.3 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 74/262 (28%), Positives = 118/262 (45%)
Query: 13 HEESVWAVTWVPAT----ETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAA 68
H +V A+ + P + + + L + + D +VKLW D + GH + V V
Sbjct: 271 HNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMW 330
Query: 69 HPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVK 128
HPSG + D R++D++ I E V+ + F G+ LA GG A +
Sbjct: 331 HPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS-LAGTGGLDAFGR 389
Query: 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 188
+WD T I L EG K + + +SP+G IA GS D T V+D+
Sbjct: 390 VWDLRTGRCIMFL-----EG--------HLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 436
Query: 189 RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248
+ + ++ + H V + + P+ L + + D ++ G S + ++GH V+
Sbjct: 437 QRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMG 496
Query: 249 VDASPDGAAITTGSSDRTVKLW 270
+D S DG I T S DRT KLW
Sbjct: 497 LDISSDGQLIATCSYDRTFKLW 518
Score = 211 (79.3 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 68/290 (23%), Positives = 121/290 (41%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIA--------ASASLDSF 83
+L T KLW D L T GH V ++ HP ++ AS + D
Sbjct: 244 MLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGS 303
Query: 84 VRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSI 143
V+++ +D++ +A +E V ++ + P G L G + + W W+L A I
Sbjct: 304 VKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFL----GTTCYDRSW--RLWDLEAQEEI 357
Query: 144 PRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPV 203
EG V +A+ DG G +D V+D+ + + LEGH +
Sbjct: 358 LHQEG--------HSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEI 409
Query: 204 RSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASP-DGAAITTGS 262
+ +SP + + D+T ++D + V + H + V V P G + TG+
Sbjct: 410 YGINFSPNGYHIATGSGDNT-CKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGA 468
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
D T K+W + ++++ H +V G+ G + + S D++ L+
Sbjct: 469 YDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 195 (73.7 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 56/229 (24%), Positives = 97/229 (42%)
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
P+ + A+A +++ V + + TL + V + F PK T V L
Sbjct: 240 PNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSL----DQKDVNL 295
Query: 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
A + S+ E + + + + V V W P GR + D + ++D+
Sbjct: 296 ASCAADGSVKLWSLDSDEPVADIEGHTVR--VARVMWHPSGRFLGTTCYDRSWRLWDLEA 353
Query: 190 AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSV 249
+ + H EGH M V + + D + + D ++D + + GH + +
Sbjct: 354 QEEILHQEGHSMGVYDIAFHQ-DGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGI 412
Query: 250 DASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGG 298
+ SP+G I TGS D T K+WDL R + ++ H + V GV F P+ G
Sbjct: 413 NFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHG 461
Score = 157 (60.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 47/204 (23%), Positives = 88/204 (43%)
Query: 110 FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169
F P LA A S KLW +L+ TL R K +S+ D
Sbjct: 238 FSPNSKMLATACW-SGLCKLWSVPDCSLLHTL---RGHNTNVGAIVFHPKSTVSLD-QKD 292
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
+C + DG++ ++ + + + +EGH + V +++ P R L + D ++D
Sbjct: 293 VNLASCAA-DGSVKLWSLDSDEPVADIEGHTVRVARVMWHP-SGRFLGTTCYDRSWRLWD 350
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
E + + GH+ V + DG+ TG D ++WDL + + H +++
Sbjct: 351 LEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIY 410
Query: 290 GVSFRPLGGRVVSVSDDKSISLYE 313
G++F P G + + S D + +++
Sbjct: 411 GINFSPNGYHIATGSGDNTCKVWD 434
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 245 (91.3 bits), Expect = 6.6e-20, P = 6.6e-20
Identities = 76/281 (27%), Positives = 129/281 (45%)
Query: 50 MQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQ 109
+Q + +T L + SV P G A+ + D +RV+D+ T +++ +
Sbjct: 336 LQDDNADTTGDLYIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLD 395
Query: 110 FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169
F G T+A +G G +V+LWD + +I +G V +VA SPD
Sbjct: 396 FARDGRTIA-SGSGDRTVRLWDIENGTALTVFTIE--DG------------VTTVAISPD 440
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEG---HFMPVRSLVYSPVDPRVLFSASDDTHVH 226
+ +A GS+D ++ V+D+T+ + LEG H V S+ +SP + R L + S D +
Sbjct: 441 TKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSP-NGRDLVTGSLDKTIK 499
Query: 227 MYD------------AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
+++ ++G V GH +VLSV +PD + +GS DR V+ WD
Sbjct: 500 LWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRT 559
Query: 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
+ + H + V V+ P GG + S D ++ Y+
Sbjct: 560 GSTQLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIWSYT 600
Score = 208 (78.3 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 72/250 (28%), Positives = 110/250 (44%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L TG+ D+ +++W + GH + S+ G AS S D VR++D++ N
Sbjct: 361 LATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIE-N 419
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ T+ V + P T AG SV++WD L + R EG P
Sbjct: 420 GTALTVFTIEDGVTTVAISPD-TKYVAAGSLDKSVRVWD-----LTQGCPVERLEG--PD 471
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR------------AKFLHHLEGHF 200
S V SVA+SP+GR + GS+D TI ++++ + + EGH
Sbjct: 472 GHKDS---VYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHR 528
Query: 201 MPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITT 260
V S+ +P D + + S S D V +D S + GH + V+SV SP G T
Sbjct: 529 DFVLSVALTP-DNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFAT 587
Query: 261 GSSDRTVKLW 270
GS D ++W
Sbjct: 588 GSGDMRARIW 597
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 50/185 (27%), Positives = 91/185 (49%)
Query: 135 WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLH 194
W I ++PR + + V V +S DG+ +A G + + +FDV + +
Sbjct: 276 WWAIFNQAVPRVLDVDLVHTLQHESVVCCVRFSADGKYVATGC-NRSAQIFDVNTGEKVC 334
Query: 195 HLEGHF------MPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248
L+ + +RS+ +SP D + L + ++D + ++D +++ +GH + S
Sbjct: 335 VLQDDNADTTGDLYIRSVCFSP-DGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYS 393
Query: 249 VDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKS 308
+D + DG I +GS DRTV+LWD+ A+ T D V V+ P V + S DKS
Sbjct: 394 LDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIE-DGVTTVAISPDTKYVAAGSLDKS 452
Query: 309 ISLYE 313
+ +++
Sbjct: 453 VRVWD 457
Score = 169 (64.5 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 66/252 (26%), Positives = 116/252 (46%)
Query: 85 RVFDVDTNASIATLEASPSE------VWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLI 138
++FDV+T + L+ ++ + + F P G LA G +++WD T
Sbjct: 323 QIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSPDGKYLAT-GAEDKQIRVWDITT---- 377
Query: 139 ATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFL--HHL 196
T+ I + ++ + S+ ++ DGR IA GS D T+ ++D+ L +
Sbjct: 378 RTIRI---------QFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTI 428
Query: 197 EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSL--VTAMSGHASWVLSVDASP 253
E V ++ SP D + + + S D V ++D +G + + GH V SV SP
Sbjct: 429 EDG---VTTVAISP-DTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSP 484
Query: 254 DGAAITTGSSDRTVKLWDL-----NMR-------AAMQSMTNHTDQVWGVSFRPLGGRVV 301
+G + TGS D+T+KLW+L NM+ +++ H D V V+ P V+
Sbjct: 485 NGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVM 544
Query: 302 SVSDDKSISLYE 313
S S D+ + ++
Sbjct: 545 SGSKDRGVQFWD 556
>RGD|1307480 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0031965 "nuclear membrane"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307480 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH474015 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD
CTD:10885 OrthoDB:EOG412M4S IPI:IPI00201140 RefSeq:NP_001101175.1
UniGene:Rn.12973 Ensembl:ENSRNOT00000026726 GeneID:310720
KEGG:rno:310720 NextBio:662507 Uniprot:D4A106
Length = 942
Score = 248 (92.4 bits), Expect = 7.0e-20, P = 7.0e-20
Identities = 72/275 (26%), Positives = 121/275 (44%)
Query: 40 ETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLE 99
E+VK+W +Q RT C + P + ++++D+ + + T+
Sbjct: 435 ESVKIWNRSTLQCIRTMP--CEYALCSFFVPGDRQVVIGTKTGNMQLYDLASGNLLETIA 492
Query: 100 ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL-SIPRPEGLKPTDKSSSK 158
A +W M P V GG +VK WD + L+ S + +K T
Sbjct: 493 AHDGALWSMSLSPDQRGF-VTGGADKAVKFWD---FELVTDKNSTQKRLSVKQTRILQLD 548
Query: 159 KFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFS 218
+ VL V +SPD R +A +D T+ +F V KF L GH +PV + S D ++ +
Sbjct: 549 EDVLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISH-DGALIAT 607
Query: 219 ASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAM 278
S D +V ++ + ++ H V+ + P T D +K WD + +
Sbjct: 608 GSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSHLFFTAGKDHKIKQWDADKFEHI 667
Query: 279 QSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
Q++ H ++W ++ P G VVS S DKS+ L+E
Sbjct: 668 QTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWE 702
Score = 182 (69.1 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 81/306 (26%), Positives = 132/306 (43%)
Query: 24 PATETRPALLLTGSLDE----TVKLWRPDDMQLER-TNTGHCLGVVSVAAHPSGIIAASA 78
P E + LL +L E + L P ++ R T GH V +++ I SA
Sbjct: 373 PQGELKAVFLLQNNLVELYSLSTSLPNPQPVRTSRITIGGHRSDVRTLSFSSDNIAVLSA 432
Query: 79 SLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLI 138
+ +S V++++ T I T+ P E F G V G + +++L+D A+ NL+
Sbjct: 433 AAES-VKIWNRSTLQCIRTM---PCEYALCSFFVPGDRQVVIGTKTGNMQLYDLASGNLL 488
Query: 139 ATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFD---VT----RAK 191
T++ +G + S++ SPD R G D + +D VT K
Sbjct: 489 ETIAAH--DGA-----------LWSMSLSPDQRGFVTGGADKAVKFWDFELVTDKNSTQK 535
Query: 192 FLHHLEGHFMP----VRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVL 247
L + + V + YSP D R+L + D V ++ + ++ GH V+
Sbjct: 536 RLSVKQTRILQLDEDVLYVCYSP-DQRLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVI 594
Query: 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDK 307
+D S DGA I TGS+DR VK+W L+ +S+ H D V + F P + D
Sbjct: 595 CMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSHLFFTAGKDH 654
Query: 308 SISLYE 313
I ++
Sbjct: 655 KIKQWD 660
Score = 166 (63.5 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 45/156 (28%), Positives = 71/156 (45%)
Query: 158 KKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLF 217
K+ V + SPDG +A G DG I VF + + GH V SL Y + R L
Sbjct: 65 KQEVTCLCPSPDGLHLAVGYEDGAIRVFSLLSGEGNITFNGHRAAVTSLKYDQLGGR-LA 123
Query: 218 SASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA 277
S S DT V ++D +S + + GH V + + T D VK WDL+ +
Sbjct: 124 SGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDLDNQHC 183
Query: 278 MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
++M H +VWG+ R+++ + D + ++
Sbjct: 184 FKTMVGHRTEVWGLVLVSEETRLITGAADSELRAWD 219
Score = 122 (48.0 bits), Expect = 0.00030, P = 0.00030
Identities = 32/108 (29%), Positives = 49/108 (45%)
Query: 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90
AL+ TGS D VK+W D R+ H V+ + P + +A D ++ +D D
Sbjct: 603 ALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSHLFFTAGKDHKIKQWDAD 662
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLI 138
I TLE E+W + P G + V+ S++LW+ LI
Sbjct: 663 KFEHIQTLEGHHQEIWCLAVSPSGDYV-VSASHDKSLRLWERTREPLI 709
Score = 121 (47.7 bits), Expect = 0.00039, P = 0.00039
Identities = 29/112 (25%), Positives = 55/112 (49%)
Query: 161 VLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSAS 220
V S+ + G R+A GS D + ++DV L+ L+GH V ++ + +L ++
Sbjct: 110 VTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLR-ERNLLVTSG 168
Query: 221 DDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
DT V +D + + M GH + V + + + TG++D ++ WD+
Sbjct: 169 KDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEETRLITGAADSELRAWDI 220
Score = 88 (36.0 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 29/119 (24%), Positives = 50/119 (42%)
Query: 33 LLTGSLDETVKLWRP-DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
L +GS D V +W ++ L R GH V + ++ D+ V+ +D+D
Sbjct: 122 LASGSKDTDVIIWDVINESGLYRLK-GHKDAVTQALFLRERNLLVTSGKDTMVKWWDLDN 180
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
T+ +EVW + + T L + G + ++ WD A I P P+ +K
Sbjct: 181 QHCFKTMVGHRTEVWGLVLVSEETRL-ITGAADSELRAWDIAYLQEIDDPEEPEPKKIK 238
Score = 78 (32.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 24/117 (20%), Positives = 52/117 (44%)
Query: 198 GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAA 257
GH VR+L +S + VL +A++ V +++ + M + L P
Sbjct: 412 GHRSDVRTLSFSSDNIAVLSAAAES--VKIWNRSTLQCIRTMP--CEYALCSFFVPGDRQ 467
Query: 258 ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
+ G+ ++L+DL ++++ H +W +S P V+ DK++ +++
Sbjct: 468 VVIGTKTGNMQLYDLASGNLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDF 524
Score = 44 (20.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 161 VLSVAWSPDGRRIACGSMDGTISVF 185
V+++A GR +AC D + VF
Sbjct: 282 VVNLAVDKTGRILACHGTDSVLEVF 306
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 244 (91.0 bits), Expect = 8.2e-20, P = 8.2e-20
Identities = 79/277 (28%), Positives = 121/277 (43%)
Query: 50 MQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQ 109
+Q E + L V SVA P G A+ D +R++D+ L E++ +
Sbjct: 336 LQEESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLD 395
Query: 110 FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169
F G TL V+G G +V LWD L TD V +V +SPD
Sbjct: 396 FSKDGKTL-VSGSGDRTVCLWDVEAGEQKLILH---------TDDG-----VTTVMFSPD 440
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
G+ IA GS+D I ++ + + L GH V S+ +SP D + L S S D + +++
Sbjct: 441 GQFIAAGSLDKVIRIW-TSSGTLVEQLHGHEESVYSVAFSP-DGKYLVSGSLDNTIKLWE 498
Query: 230 A------------EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA 277
EG +GH ++LSV SPDG I +GS DRT++ W + +
Sbjct: 499 LQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHS 558
Query: 278 MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
++ H + V V+ P G + S D ++ Y
Sbjct: 559 QLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWSY 595
Score = 189 (71.6 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 67/250 (26%), Positives = 111/250 (44%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L TG D+ +++W ++ R TGH + S+ G S S D V ++DV+
Sbjct: 361 LATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAG 420
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
L V + F P G +A AG +++W T++ L+ E L
Sbjct: 421 EQKLILHTDDG-VTTVMFSPDGQFIA-AGSLDKVIRIW-TSSGTLV--------EQLHGH 469
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV----TRAKFLHH--------LEGHF 200
++S V SVA+SPDG+ + GS+D TI ++++ A ++ GH
Sbjct: 470 EES-----VYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHK 524
Query: 201 MPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITT 260
+ S+ SP D + + S S D + + + + GH + V+SV SP+G T
Sbjct: 525 DFILSVTVSP-DGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFAT 583
Query: 261 GSSDRTVKLW 270
GS D ++W
Sbjct: 584 GSGDLRARIW 593
Score = 180 (68.4 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 54/160 (33%), Positives = 81/160 (50%)
Query: 164 VAWSPDGRRIACGSMDGTISVFDVTRAKFLHHL-------EGHFMPVRSLVYSPVDPRVL 216
V +S DG+ +A G + VF+V K + L EG VRS+ +SP D + L
Sbjct: 305 VRFSADGKFLATGCNRAAM-VFNVETGKLITLLQEESSKREGDLY-VRSVAFSP-DGKYL 361
Query: 217 FSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRA 276
+ +D + ++D K + ++GH + S+D S DG + +GS DRTV LWD+ A
Sbjct: 362 ATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVE--A 419
Query: 277 AMQSMTNHTDQ-VWGVSFRPLGGRVVSVSDDKSISLYEYS 315
Q + HTD V V F P G + + S DK I ++ S
Sbjct: 420 GEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSS 459
Score = 128 (50.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 33/129 (25%), Positives = 67/129 (51%)
Query: 191 KFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHAS------ 244
+ LH LE H + + +S D + L + + + +++ E L+T + +S
Sbjct: 291 QLLHTLE-HTSVICYVRFS-ADGKFLATGCNRAAM-VFNVETGKLITLLQEESSKREGDL 347
Query: 245 WVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVS 304
+V SV SPDG + TG D+ +++WD+ + + +T H +++ + F G +VS S
Sbjct: 348 YVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGS 407
Query: 305 DDKSISLYE 313
D+++ L++
Sbjct: 408 GDRTVCLWD 416
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 40/132 (30%), Positives = 60/132 (45%)
Query: 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWR-------PDDMQLE-----RTNTG 58
+ HEESV++V + P + L++GSLD T+KLW M E +T TG
Sbjct: 467 HGHEESVYSVAFSPDGK----YLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTG 522
Query: 59 HCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLA 118
H ++SV P G S S D ++ + D+ S TL+ + V + P G A
Sbjct: 523 HKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFA 582
Query: 119 VAGGGSASVKLW 130
G G ++W
Sbjct: 583 T-GSGDLRARIW 593
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 239 (89.2 bits), Expect = 8.3e-20, P = 8.3e-20
Identities = 83/287 (28%), Positives = 135/287 (47%)
Query: 45 WRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSE 104
W P + ++ TGH L + V HP I AS S D+ ++V+D +T TL+
Sbjct: 92 WIPRPPETQKL-TGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDA 150
Query: 105 VWQMQFDPKGTTLAVAGGGSASVKLWDTA-TWNLIATLSIPRPEGLKPTDKSSSKKFVLS 163
V + D G L V+ S+KLWD T++ + +L +G + T V S
Sbjct: 151 VNDIAIDAAGKQL-VSCSSDLSIKLWDFGQTYDCLKSL-----KGHEHT--------VSS 196
Query: 164 VAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 223
V + P G + S D TI +D++ ++ GH VR + S D + SAS D
Sbjct: 197 VTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISN-DGTLFASASLDQ 255
Query: 224 HVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAA--IT-------------TGSSDRTVK 268
V ++ KS + H V V+ +PD A +T +GS DR++K
Sbjct: 256 TVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIK 315
Query: 269 LWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
W++N + ++ H + V G++F P G ++SV+DDK++ ++E S
Sbjct: 316 AWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELS 362
Score = 193 (73.0 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 71/299 (23%), Positives = 129/299 (43%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDV-D 90
++ + S D T+K+W + QLERT GH V +A +G S S D ++++D
Sbjct: 120 IMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQ 179
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
T + +L+ V + F P G ++ ++K WD +T + T
Sbjct: 180 TYDCLKSLKGHEHTVSSVTFLPTGD-FVLSASRDHTIKQWDISTGYCVYTFR-------- 230
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISV--FDVTRAKFLHHLEGHFMPVRSLVY 208
+V + S DG A S+D T++V F AK + L H V + +
Sbjct: 231 -----GHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLV--LRDHEHAVECVEW 283
Query: 209 SP---------VDPR-----VLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPD 254
+P P +LFS S D + ++ ++ + H +WV + P
Sbjct: 284 APDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPK 343
Query: 255 GAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
G + + + D+T+++W+L+ + M+++ H V V+F V++ S D S ++E
Sbjct: 344 GKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWE 402
Score = 126 (49.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 54/230 (23%), Positives = 102/230 (44%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS 65
LKS++ HE +V +VT++P + +L+ S D T+K W T GH V
Sbjct: 184 LKSLKG-HEHTVSSVTFLPTGD----FVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRM 238
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNAS----------IATLEASP----SEVWQMQFD 111
+ G + ASASLD V V+ T ++ + +E +P + V Q +
Sbjct: 239 IRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPE 298
Query: 112 PKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGR 171
T + +G S+K W+ T +++ TL + + +V +A+ P G+
Sbjct: 299 GNSTHILFSGSRDRSIKAWNINTGDVLFTLL-------------AHENWVRGLAFHPKGK 345
Query: 172 RIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASD 221
+ + D T+ V++++ + + +E H V ++ + P V+ + D
Sbjct: 346 YLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVD 395
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 247 (92.0 bits), Expect = 9.0e-20, P = 9.0e-20
Identities = 71/282 (25%), Positives = 128/282 (45%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+L+ + D ++K+W +Q RT C + P + ++++D+ +
Sbjct: 430 ILSAAAD-SIKIWNRSTLQCIRTMA--CEYALCSFFVPGDRQVVIGTKTGKLQLYDLASG 486
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL-SIPRPEGLKP 151
+ T++A +W + P V GG SVK WD + L+ S + +K
Sbjct: 487 NLLETIDAHDGALWSLSLSPDQRGF-VTGGADKSVKFWD---FELVKDENSTQKRLSVKQ 542
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
T + VL V++SP+ + +A +D T+ +F V KF L GH +PV + S
Sbjct: 543 TRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDIS-Y 601
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
D ++ + S D +V ++ + ++ H V+ + P T DR +K WD
Sbjct: 602 DGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPKSHLFFTAGKDRKIKQWD 661
Query: 272 LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ +Q++ H ++W ++ P G VVS S DKS+ L+E
Sbjct: 662 ADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE 703
Score = 167 (63.8 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 40/149 (26%), Positives = 69/149 (46%)
Query: 167 SPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVH 226
SPDG +A G DG+I +F + + GH + SL Y + R L S S DT +
Sbjct: 74 SPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITSLKYDQLGGR-LASGSKDTDII 132
Query: 227 MYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTD 286
++D +S + + GH + + + T D VK WDL+ + ++M H
Sbjct: 133 VWDVINESGLYRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRT 192
Query: 287 QVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
+VWG+ R+++ + D + ++ S
Sbjct: 193 EVWGLVLVSEEKRLITGASDSELRAWDIS 221
Score = 167 (63.8 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 78/306 (25%), Positives = 125/306 (40%)
Query: 24 PATETRPALLLTGSLDETVKLWR----PDDMQLER-TNTGHCLGVVSVAAHPSGIIAASA 78
P E + LL +L E L P ++ R T GH V +++ I SA
Sbjct: 374 PQGELKAVFLLQNNLVELYSLNASTPGPQPVRTNRITIGGHRSDVRTLSFSSDNIAILSA 433
Query: 79 SLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLI 138
+ DS +++++ T I T+ E F G V G + ++L+D A+ NL+
Sbjct: 434 AADS-IKIWNRSTLQCIRTMAC---EYALCSFFVPGDRQVVIGTKTGKLQLYDLASGNLL 489
Query: 139 ATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEG 198
T+ D + LS+ SPD R G D ++ +D K + +
Sbjct: 490 ETI-----------DAHDGALWSLSL--SPDQRGFVTGGADKSVKFWDFELVKDENSTQK 536
Query: 199 HFM--PVRSLV---------YSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVL 247
R+L YSP + S D T V ++ + ++ GH V+
Sbjct: 537 RLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCT-VKIFYVDTLKFFLSLYGHKLPVI 595
Query: 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDK 307
+D S DGA I TGS+DR VK+W L+ +S+ H D V + F P + D+
Sbjct: 596 CMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPKSHLFFTAGKDR 655
Query: 308 SISLYE 313
I ++
Sbjct: 656 KIKQWD 661
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 84 VRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSI 143
V ++D+ I L+ EV + P G LAV G S++++ S+
Sbjct: 47 VFIWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAV-GYEDGSIRIF-----------SL 94
Query: 144 PRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPV 203
EG + K + S+ + G R+A GS D I V+DV L+ L+GH +
Sbjct: 95 LSGEG--NVTFNGHKAAITSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAI 152
Query: 204 RSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSS 263
++ + +L ++ DT V +D + + M GH + V + + + TG+S
Sbjct: 153 TQALFLR-EKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLITGAS 211
Query: 264 DRTVKLWDLN 273
D ++ WD++
Sbjct: 212 DSELRAWDIS 221
Score = 118 (46.6 bits), Expect = 0.00084, P = 0.00084
Identities = 31/108 (28%), Positives = 49/108 (45%)
Query: 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90
AL+ TGS D VK+W D ++ H V+ + P + +A D ++ +D D
Sbjct: 604 ALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPKSHLFFTAGKDRKIKQWDAD 663
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLI 138
I TLE E+W + P G + V+ S++LW+ LI
Sbjct: 664 KFEHIQTLEGHHQEIWCLAVSPSGDYV-VSSSHDKSLRLWERTREPLI 710
Score = 90 (36.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 31/149 (20%), Positives = 62/149 (41%)
Query: 33 LLTGSLDETVKLWRP-DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
L +GS D + +W ++ L R GH + + ++ D+ V+ +D+DT
Sbjct: 122 LASGSKDTDIIVWDVINESGLYRLK-GHKDAITQALFLREKNLLVTSGKDTMVKWWDLDT 180
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
T+ +EVW + + L + G + ++ WD + I P P+ +K
Sbjct: 181 QHCFKTMVGHRTEVWGLVLVSEEKRL-ITGASDSELRAWDISYLQEIEDPEEPEPKKIKE 239
Query: 152 T-----DKSSSKKFVLSVAWSPDGRRIAC 175
+ D ++ L + +P+ R + C
Sbjct: 240 SSPGIQDSHEAEDGTLEMDETPEDRILTC 268
Score = 83 (34.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 24/117 (20%), Positives = 53/117 (45%)
Query: 198 GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAA 257
GH VR+L +S + +L +A+D + +++ + M+ + L P
Sbjct: 413 GHRSDVRTLSFSSDNIAILSAAADS--IKIWNRSTLQCIRTMA--CEYALCSFFVPGDRQ 468
Query: 258 ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
+ G+ ++L+DL ++++ H +W +S P V+ DKS+ +++
Sbjct: 469 VVIGTKTGKLQLYDLASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDF 525
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 244 (91.0 bits), Expect = 9.2e-20, Sum P(2) = 9.2e-20
Identities = 83/293 (28%), Positives = 139/293 (47%)
Query: 18 WAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNT---GHCLGVVSVAAHPSGII 74
WA + + T+P LL G+ D TV+L+ + R GH + S+ PSG +
Sbjct: 1785 WA-NCLAFSPTQP-LLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNL 1842
Query: 75 AASASLDSFVRVFDVDTNASIATLEASPSE-VWQMQFDPKGTTLAVAGGGSASVKLWDTA 133
AS S D ++V++V T+ + T+E + ++ + + F+P ++ S K+W
Sbjct: 1843 IASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNECELISCSDDYSTKVWSRF 1902
Query: 134 TWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFL 193
T + TLS EG T K +SPDG+ IA S D +I+V+ + K L
Sbjct: 1903 TTS--TTLST---EGSTNTIKHC--------VYSPDGKYIATVSRDCSIAVYLCSSKKLL 1949
Query: 194 HHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASP 253
L+GH V +SP D + L S D ++ +++ + + + + GH+S + +
Sbjct: 1950 FRLKGHTDWVNFCTFSP-DSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTK 2008
Query: 254 DGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDD 306
D I + S D +VK+WD + + S+ + T VS GR+ S SDD
Sbjct: 2009 DQKYIISASFDGSVKVWDAQFGSEITSLRHQTRISDVVSSSDASGRIFSSSDD 2061
Score = 195 (73.7 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 66/289 (22%), Positives = 124/289 (42%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTN---TGHCLGVVSVAAHPSGIIAASASLDSFVRVFDV 89
++TGS D T K+W + + TN G C +A P+ + A + D VR+FDV
Sbjct: 1755 IVTGSDDATAKVWS-STLGTQLTNFLIPGDCWANC-LAFSPTQPLLAVGATDCTVRLFDV 1812
Query: 90 DTNA---SIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRP 146
+N +A L + + F P G +A + +K+W+ T T+
Sbjct: 1813 SSNTIYREVAKLHGHTRAITSITFSPSGNLIA-STSEDLLIKVWNVQTHKAEYTI----- 1866
Query: 147 EGLKPTDKSSSKKFVLSVAWSPDGR--RIACGSMDGTISVFDVTRAKFLHHLEGHFMPVR 204
+K+ + + ++++P I+C S D + V+ EG ++
Sbjct: 1867 ------EKAHNDP-INCISFNPTNECELISC-SDDYSTKVWSRFTTSTTLSTEGSTNTIK 1918
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
VYSP D + + + S D + +Y K L+ + GH WV SPD + +G D
Sbjct: 1919 HCVYSP-DGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWD 1977
Query: 265 RTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+++W++ + + + H+ + F ++S S D S+ +++
Sbjct: 1978 FNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWD 2026
Score = 193 (73.0 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 66/293 (22%), Positives = 126/293 (43%)
Query: 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90
+++ + D + +++ + T GH + + G AS+S D+ V V+D+
Sbjct: 1535 SMIASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFSDDGKTLASSSWDNTVIVWDLI 1594
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
I + V +F P L ++ +S+ +++T+ N+
Sbjct: 1595 VGNQIHQFKDHSRAVNYCEFSPTANNLLMSCAWDSSIIIFNTSDKNIFRNF--------- 1645
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISV---FD-VTRAKFLHHLEGH--FMPVR 204
+S+ K V S WSPDG IA S DGTI + FD + + + H ++ + ++
Sbjct: 1646 ---RSAHSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGSIK 1702
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
S +S ++L + + V ++D + L++ M H+ V S DG I TGS D
Sbjct: 1703 SCKFSANSKQILATTMKND-VLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDD 1761
Query: 265 RTVKLWDLNMRAAMQSMTNHTDQVWG--VSFRPLGGRVVSVSDDKSISLYEYS 315
T K+W + + + D W ++F P + + D ++ L++ S
Sbjct: 1762 ATAKVWSSTLGTQLTNFLIPGD-CWANCLAFSPTQPLLAVGATDCTVRLFDVS 1813
Score = 159 (61.0 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 67/284 (23%), Positives = 126/284 (44%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERT-NTGHCLGVVSVAAHPSGIIAA-SASLDSFVRVFDV 89
L+ + S D +K+W + E T H + ++ +P+ S S D +V+
Sbjct: 1842 LIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNECELISCSDDYSTKVWSR 1901
Query: 90 DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGL 149
T ++ + E S + + + P G +A S+ ++ ++ L+ L +G
Sbjct: 1902 FTTSTTLSTEGSTNTIKHCVYSPDGKYIATVSR-DCSIAVYLCSSKKLLFRL-----KG- 1954
Query: 150 KPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS 209
TD +V +SPD +++ G D + V+++ K L L+GH + ++
Sbjct: 1955 -HTD------WVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFT 2007
Query: 210 PVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAA-ITTGSSDRTVK 268
D + + SAS D V ++DA+ S +T++ H + + V +S D + I + S D +K
Sbjct: 2008 K-DQKYIISASFDGSVKVWDAQFGSEITSLR-HQTRISDVVSSSDASGRIFSSSDDGIIK 2065
Query: 269 LWDLNMRAAMQSMTNHTDQVWGVSFRPL--GGRVVSVSDDKSIS 310
W + + ++T H+ + V F P GG S S S S
Sbjct: 2066 SWYPVAGSCLATLTGHSGPIKQVQFNPNSGGGGSSSFSSFSSFS 2109
Score = 133 (51.9 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 67/272 (24%), Positives = 116/272 (42%)
Query: 53 ERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDP 112
++T TG G + G + ASA DS + +F + + TL + + F
Sbjct: 1515 KQTITGLEDGATACCYSRDGSMIASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFSD 1574
Query: 113 KGTTLAVAGGGSASVKLWDTAT--WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDG 170
G TLA S+S WD W+LI I + K D S + + +SP
Sbjct: 1575 DGKTLA-----SSS---WDNTVIVWDLIVGNQIHQ---FK--DHSRAVNYC---EFSPTA 1618
Query: 171 RRI--ACGSMDGTISVFDVTRAK-FLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 227
+ +C + D +I +F+ + F + H PV S +SP D ++ S+S D + +
Sbjct: 1619 NNLLMSC-AWDSSIIIFNTSDKNIFRNFRSAHSKPVNSCCWSP-DGTLIASSSWDGTIKI 1676
Query: 228 YD-----AEG--KSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS 280
++ A+ K ++ A + S + S S + I + V L+D+N + +
Sbjct: 1677 WNPFDTIAKDRLKHVIDASLSYGS-IKSCKFSANSKQILATTMKNDVLLFDVNSQKLISV 1735
Query: 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
M NH+ V S G +V+ SDD + ++
Sbjct: 1736 MGNHSKSVNHCSLSNDGNYIVTGSDDATAKVW 1767
Score = 127 (49.8 bits), Expect = 0.00025, P = 0.00025
Identities = 29/105 (27%), Positives = 52/105 (49%)
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
D ++ SA D+ +H++ A S + + GH++W+ S DG + + S D TV +WD
Sbjct: 1533 DGSMIASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFSDDGKTLASSSWDNTVIVWD 1592
Query: 272 LNMRAAMQSMTNHTDQVWGVSFRPLGGRVV-SVSDDKSISLYEYS 315
L + + +H+ V F P ++ S + D SI ++ S
Sbjct: 1593 LIVGNQIHQFKDHSRAVNYCEFSPTANNLLMSCAWDSSIIIFNTS 1637
Score = 126 (49.4 bits), Expect = 0.00032, P = 0.00032
Identities = 62/284 (21%), Positives = 116/284 (40%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+ + S D TVKLW + T + H + G A+ D + ++D T+
Sbjct: 2120 IASSSDDGTVKLWEFNSATA--TTSAHKGSINQCVFSKDGKYVATCGQDCVLNIWDAKTH 2177
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
++ T+ S V F+ G G+ V D W + L + G K T
Sbjct: 2178 INLKTM-IFESPVTTCSFNRSGVLFIGLQDGTLEVYSKD---WKTV--LHKEKTNG-KIT 2230
Query: 153 DKSSSKKFVLSVAWSPDGRRI-ACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
S+ + SPD + A + +++ + + K+ + V S+ +S
Sbjct: 2231 RSSAHPSLNIQSTESPDYIDLFAFSTWTNCVNLLNCSE-KYFDPIVSFDDWVESVEFS-T 2288
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
+L + S V ++ VT + +S+V S+ SP+ + G+ D TV+L D
Sbjct: 2289 SGDLLAAGSRTKQVKIFSPLNDKPVTHQTS-SSYVTSLSFSPNDKYLAIGTFDGTVELLD 2347
Query: 272 LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
+ + +T + + F R+VSVS+D+S+ ++ +S
Sbjct: 2348 IASGKLRRILTTQVSSITSLKFLD-STRLVSVSNDRSLIVWNFS 2390
Score = 39 (18.8 bits), Expect = 9.2e-20, Sum P(2) = 9.2e-20
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 295 PLGGRVVSVSDDKSISLYEYS 315
P+ + S SDD ++ L+E++
Sbjct: 2115 PVTLSIASSSDDGTVKLWEFN 2135
>ASPGD|ASPL0000054401 [details] [associations]
symbol:AN0305 species:162425 "Emericella nidulans"
[GO:0034388 "Pwp2p-containing subcomplex of 90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676
GO:GO:0030529 EMBL:AACD01000006 InterPro:IPR007148 Pfam:PF04003
HOGENOM:HOG000212524 KO:K14556 OMA:SIFAHDD OrthoDB:EOG4N07P3
RefSeq:XP_657909.1 ProteinModelPortal:Q5BGM5 STRING:Q5BGM5
EnsemblFungi:CADANIAT00002409 GeneID:2876084 KEGG:ani:AN0305.2
Uniprot:Q5BGM5
Length = 963
Score = 247 (92.0 bits), Expect = 9.3e-20, P = 9.3e-20
Identities = 74/289 (25%), Positives = 130/289 (44%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+L + + ++K+W RT C + A P I + D + +FD+ ++
Sbjct: 439 MLASASNGSLKVWNVRTQNCLRTL--ECGYALCSAFLPGDKIVVVGNKDGELEIFDIASS 496
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWD--TATWNLIATL-SIPRPEGL 149
+ T++A VW +Q P G +L V+G S K W+ + T + PR L
Sbjct: 497 TLLDTIKAHDGPVWSLQVHPDGKSL-VSGSADKSAKFWNFQVVQEEIPGTKRTTPRLR-L 554
Query: 150 KPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS 209
T +LSV +SPD R +A +D T+ VF K +L GH +PV ++ S
Sbjct: 555 VHTRTLKVSDDILSVRFSPDARLLAVALLDNTVKVFFNDSLKLFLNLYGHKLPVLNMDIS 614
Query: 210 PVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASP-----DGAAITTGSSD 264
D +++ + S D V ++ + + H +++V P +G + S D
Sbjct: 615 -WDSKLIVTCSADKTVRLWGLDFGDCHKSFLAHEDSIMAVAFVPSNNEGNGHNFFSVSKD 673
Query: 265 RTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
R +K WD + +Q ++ H ++W ++ G +V+ S DKSI +E
Sbjct: 674 RVIKYWDGDKFEHIQKLSGHHGEIWAMAISHTGEFIVTASHDKSIRTWE 722
Score = 160 (61.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 78/276 (28%), Positives = 121/276 (43%)
Query: 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
GH + SVA + ASAS S ++V++V T + TLE + F P G +
Sbjct: 423 GHRTDIRSVALSSDDRMLASASNGS-LKVWNVRTQNCLRTLECGYALC--SAFLP-GDKI 478
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS 177
V G ++++D A+ L+ T I +G P V S+ PDG+ + GS
Sbjct: 479 VVVGNKDGELEIFDIASSTLLDT--IKAHDG--P---------VWSLQVHPDGKSLVSGS 525
Query: 178 MDGTISV--FDVTRAKF---------LHHLEGHFMPVR----SLVYSPVDPRVLFSASDD 222
D + F V + + L + + V S+ +SP D R+L A D
Sbjct: 526 ADKSAKFWNFQVVQEEIPGTKRTTPRLRLVHTRTLKVSDDILSVRFSP-DARLLAVALLD 584
Query: 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMT 282
V ++ + L + GH VL++D S D I T S+D+TV+LW L+ +S
Sbjct: 585 NTVKVFFNDSLKLFLNLYGHKLPVLNMDISWDSKLIVTCSADKTVRLWGLDFGDCHKSFL 644
Query: 283 NHTDQVWGVSFRPL-----GGRVVSVSDDKSISLYE 313
H D + V+F P G SVS D+ I ++
Sbjct: 645 AHEDSIMAVAFVPSNNEGNGHNFFSVSKDRVIKYWD 680
Score = 102 (41.0 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 27/119 (22%), Positives = 56/119 (47%)
Query: 196 LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDG 255
+ GH +RS+ S D R+L SAS+ + + +++ ++ + + + L P
Sbjct: 421 IPGHRTDIRSVALSS-DDRMLASASNGS-LKVWNVRTQNCLRTLE--CGYALCSAFLPGD 476
Query: 256 AAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
+ G+ D ++++D+ + ++ H VW + P G +VS S DKS + +
Sbjct: 477 KIVVVGNKDGELEIFDIASSTLLDTIKAHDGPVWSLQVHPDGKSLVSGSADKSAKFWNF 535
Score = 83 (34.3 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 30/133 (22%), Positives = 57/133 (42%)
Query: 20 VTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASAS 79
VT + ++T + G D +++LW + + GH + +A +G+ AS S
Sbjct: 75 VTVITQSKTDEDIFAVGYEDGSIRLWDSRTETVMISFNGHKSAITQLAFDNAGVRLASGS 134
Query: 80 LDSFVRVFDVDTNASIATLEASPSEVWQMQF-DPKGTTLAVAG-----------GGSASV 127
D+ + ++D+ + + L ++ + F P L AG G A +
Sbjct: 135 RDTNIILWDLISEVGLFKLRGHTDQITSLHFLVPTLELLNEAGLSEHAGFLITTGKDALI 194
Query: 128 KLWDTATWNLIAT 140
K+WD A+ + I T
Sbjct: 195 KVWDLASQHCIET 207
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 246 (91.7 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 63/152 (41%), Positives = 84/152 (55%)
Query: 120 AGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMD 179
+G +V+LWD AT +L TL EG +VLSVA+SPDGR +A GS D
Sbjct: 712 SGSDDETVRLWDPATGSLQQTL-----EG--------HSGWVLSVAFSPDGRLLASGSFD 758
Query: 180 GTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAM 239
T+ ++D L GH VRS+ +SP D R+L S S D V ++D SL +
Sbjct: 759 KTVRLWDPATGSLQQTLRGHSNWVRSVAFSP-DGRLLASGSFDKTVRLWDPATGSLQQTL 817
Query: 240 SGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
GH+ V SV SPDG + +GS D+TV+LWD
Sbjct: 818 RGHSDTVRSVAFSPDGRLLASGSFDKTVRLWD 849
Score = 243 (90.6 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 55/141 (39%), Positives = 81/141 (57%)
Query: 173 IACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG 232
+A GS D T+ ++D LEGH V S+ +SP D R+L S S D V ++D
Sbjct: 710 LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSP-DGRLLASGSFDKTVRLWDPAT 768
Query: 233 KSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVS 292
SL + GH++WV SV SPDG + +GS D+TV+LWD + Q++ H+D V V+
Sbjct: 769 GSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVA 828
Query: 293 FRPLGGRVVSVSDDKSISLYE 313
F P G + S S DK++ L++
Sbjct: 829 FSPDGRLLASGSFDKTVRLWD 849
Score = 234 (87.4 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 72/183 (39%), Positives = 95/183 (51%)
Query: 4 AGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGV 63
A L+++E H SVWAV L +GS DETV+LW P L++T GH V
Sbjct: 694 AELQTLEG-HSNSVWAV------------LASGSDDETVRLWDPATGSLQQTLEGHSGWV 740
Query: 64 VSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGG 123
+SVA P G + AS S D VR++D T + TL + V + F P G LA +G
Sbjct: 741 LSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLA-SGSF 799
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
+V+LWD AT +L TL G T V SVA+SPDGR +A GS D T+
Sbjct: 800 DKTVRLWDPATGSLQQTL-----RGHSDT--------VRSVAFSPDGRLLASGSFDKTVR 846
Query: 184 VFD 186
++D
Sbjct: 847 LWD 849
Score = 196 (74.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 41/99 (41%), Positives = 60/99 (60%)
Query: 215 VLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
VL S SDD V ++D SL + GH+ WVLSV SPDG + +GS D+TV+LWD
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPAT 768
Query: 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ Q++ H++ V V+F P G + S S DK++ L++
Sbjct: 769 GSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWD 807
Score = 190 (71.9 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 50/124 (40%), Positives = 64/124 (51%)
Query: 22 WVPATETRP--ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASAS 79
WV + P LL +GS D+TV+LW P L++T GH V SVA P G + AS S
Sbjct: 739 WVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGS 798
Query: 80 LDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIA 139
D VR++D T + TL V + F P G LA +G +V+LWD AT L
Sbjct: 799 FDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLA-SGSFDKTVRLWDPATGTLQQ 857
Query: 140 TLSI 143
TL I
Sbjct: 858 TLII 861
Score = 138 (53.6 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 39/109 (35%), Positives = 57/109 (52%)
Query: 22 WVPATETRP--ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASAS 79
WV + P LL +GS D+TV+LW P L++T GH V SVA P G + AS S
Sbjct: 781 WVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGS 840
Query: 80 LDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVK 128
D VR++D T TL + V ++QF G+ ++ GS +++
Sbjct: 841 FDKTVRLWDPATGTLQQTLIIKGT-VTELQFSQDGSYIST-NLGSLNIQ 887
>ASPGD|ASPL0000054968 [details] [associations]
symbol:AN1387 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319
EMBL:AACD01000019 HOGENOM:HOG000208957 KO:K12601 OMA:RNCVATH
OrthoDB:EOG4SJ8PN RefSeq:XP_658991.1 ProteinModelPortal:Q5BDJ3
EnsemblFungi:CADANIAT00001220 GeneID:2877164 KEGG:ani:AN1387.2
Uniprot:Q5BDJ3
Length = 306
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 69/267 (25%), Positives = 114/267 (42%)
Query: 49 DMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQM 108
D L +T H G V G A S V +++ T + +++W +
Sbjct: 48 DFPLVQTLEAHKAGCHHVVTDAKGSRAVSVGFGGEVVIWESHEGTWSKTKDVVLADIWAV 107
Query: 109 QFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP 168
G LA VK+WD E ++ D + F + SP
Sbjct: 108 ALSADGQYLA-GTTQDGHVKVWDMNA----------NEEEIR--DHETKGSFGTCIDLSP 154
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
DGR IA G +G++ +F + L G PVRS+ +SP + L +A D + +Y
Sbjct: 155 DGRFIASGHENGSVYIFSTETGRMPFSLSGLVKPVRSVAFSP-GGKFLAAAGDSRVIVLY 213
Query: 229 DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQV 288
D V +++GHA+W+LS+ S G + +GS D VK+W ++ R + + + +
Sbjct: 214 DTTSGEQVASLTGHAAWILSLSWSNTGEYLLSGSFDGKVKVWSIDTRNCVATHSETERAI 273
Query: 289 WGVSFRPLGGR---VVSVSDDKSISLY 312
W V + P G+ + ++SIS Y
Sbjct: 274 WSVIWLPKIGKSEGFATAGANRSISFY 300
Score = 118 (46.6 bits), Expect = 0.00016, P = 0.00016
Identities = 58/234 (24%), Positives = 97/234 (41%)
Query: 42 VKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNAS-IATLEA 100
V +W + +T + +VA G A + D V+V+D++ N I E
Sbjct: 83 VVIWESHEGTWSKTKDVVLADIWAVALSADGQYLAGTTQDGHVKVWDMNANEEEIRDHET 142
Query: 101 SPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGL-KPTDKSSSKK 159
S + P G +A +G + SV ++ T T + +LS GL KP
Sbjct: 143 KGSFGTCIDLSPDGRFIA-SGHENGSVYIFSTETGRMPFSLS-----GLVKP-------- 188
Query: 160 FVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSA 219
V SVA+SP G+ +A I ++D T + + L GH + SL +S L S
Sbjct: 189 -VRSVAFSPGGKFLAAAGDSRVIVLYDTTSGEQVASLTGHAAWILSLSWSNTG-EYLLSG 246
Query: 220 SDDTHVHMYDAEGKSLVTAMSG--HASW-VLSVDASPDGAAITTGSSDRTVKLW 270
S D V ++ + ++ V S A W V+ + T ++R++ +
Sbjct: 247 SFDGKVKVWSIDTRNCVATHSETERAIWSVIWLPKIGKSEGFATAGANRSISFY 300
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 245 (91.3 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 70/285 (24%), Positives = 131/285 (45%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHC-LGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
+L + E+VK+W + R+ C G+ +V A P + + + VF++ +
Sbjct: 410 MLVSTSSESVKVWNMKSLSCIRSIA--CDYGLCTVFA-PGNLHVIVGTKTGTIEVFELAS 466
Query: 92 NASIATLEASPSEVWQMQFDP--KGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE-- 147
A +A+++A VW + P +G T +GG VK WD + LIA+ + +
Sbjct: 467 AARVASIKAHEGSVWSLVLTPDLRGVT---SGGADKLVKFWD---FELIASQENSKHKVL 520
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLV 207
L T + VL++ +S D + +A +D T+ +F KF L GH +PV L
Sbjct: 521 NLSLTKTLKVESDVLALKYSADNKFLAVSLLDNTVKIFYTDTVKFHLSLYGHKLPVMCLD 580
Query: 208 YSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTV 267
S D ++ + S D ++ ++ + + H ++ V P + S D+ +
Sbjct: 581 ISD-DSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFISASKDKRI 639
Query: 268 KLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
K WD + +Q++ H +VW ++ +G +S S D+SI ++
Sbjct: 640 KYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIF 684
Score = 175 (66.7 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 41/155 (26%), Positives = 74/155 (47%)
Query: 158 KKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLF 217
K V +V S DG +A G DG+I ++ ++ + GH V ++ ++ + +L
Sbjct: 59 KAEVTNVCLSKDGALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLG-NILV 117
Query: 218 SASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA 277
S S DT V ++D +S + + GH + SV + T S D +K+WD +
Sbjct: 118 SGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHC 177
Query: 278 MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+Q++ H + +WG+ P R+ S + D I +
Sbjct: 178 IQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFW 212
Score = 140 (54.3 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 52/189 (27%), Positives = 86/189 (45%)
Query: 125 ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISV 184
AS+K + + W+L+ T P+ L+ + K V W D IA + V
Sbjct: 471 ASIKAHEGSVWSLVLT-----PD-LRGVTSGGADKLVKF--W--DFELIA-SQENSKHKV 519
Query: 185 FDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHAS 244
+++ K L +E V +L YS + + S D+T V ++ + ++ GH
Sbjct: 520 LNLSLTKTLK-VESD---VLALKYSADNKFLAVSLLDNT-VKIFYTDTVKFHLSLYGHKL 574
Query: 245 WVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVS 304
V+ +D S D I TGS+D+ +K+W L+ +S H D + VSF P +S S
Sbjct: 575 PVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFISAS 634
Query: 305 DDKSISLYE 313
DK I ++
Sbjct: 635 KDKRIKYWD 643
Score = 130 (50.8 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 36/133 (27%), Positives = 66/133 (49%)
Query: 10 ENAHEESVWA-VTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAA 68
++ +EE + A VT V ++ ALL +G D ++++W D QL+ GH V ++
Sbjct: 51 QSLYEEDIKAEVTNVCLSKDG-ALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTF 109
Query: 69 HPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVK 128
+ G I S S D+ V V+D+ T + + L ++ ++ + L + +K
Sbjct: 110 NRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHL-ITSSKDGFIK 168
Query: 129 LWDTATWNLIATL 141
+WDT T + I T+
Sbjct: 169 IWDTETQHCIQTI 181
Score = 118 (46.6 bits), Expect = 0.00084, P = 0.00084
Identities = 28/100 (28%), Positives = 50/100 (50%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
L++TGS D+ +K+W D ++ H ++ V+ PS SAS D ++ +D D
Sbjct: 587 LIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFISASKDKRIKYWDADK 646
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWD 131
I T+EA EVW + G ++G S+++++
Sbjct: 647 FEHIQTIEAHHGEVWSLAMGSVGDFF-ISGSHDRSIRIFN 685
Score = 93 (37.8 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 55/225 (24%), Positives = 99/225 (44%)
Query: 108 MQFDPKGTTLAVAGGGSASVKLWDTATWNL--IATLSIPRPEGLKPTDKSSSK------- 158
++FDP LAV G V L+ ++ + +SI + T K+SSK
Sbjct: 293 VRFDPTNKILAVQSTGKF-VDLFKITHYDTMKLEEISIVEEMRHRQTIKTSSKVRFFSFG 351
Query: 159 -------KFVLSVAW-SPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
KFV+++A S + I G F+V+ L GH +RSL S
Sbjct: 352 NDIKHWNKFVITLAGNSLEAYEIKEKEQGG--GAFEVSST--LDQA-GHRSDIRSLSLSS 406
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
D ++L S S ++ V +++ + S + +++ + L +P + G+ T++++
Sbjct: 407 ND-QMLVSTSSES-VKVWNMKSLSCIRSIA--CDYGLCTVFAPGNLHVIVGTKTGTIEVF 462
Query: 271 DLNMRAAMQSMTNHTDQVWGVSFRP-LGGRVVSVSDDKSISLYEY 314
+L A + S+ H VW + P L G V S DK + +++
Sbjct: 463 ELASAARVASIKAHEGSVWSLVLTPDLRG-VTSGGADKLVKFWDF 506
Score = 92 (37.4 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 31/126 (24%), Positives = 56/126 (44%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRP-DDMQLERTNTGHCLGVV 64
L++V N H SV +T+ +L++GS D V +W + L R GH +
Sbjct: 93 LQAVFNGHRGSVTTMTF----NRLGNILVSGSKDTEVIVWDIITESGLFRLR-GHRDQIT 147
Query: 65 SVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGS 124
SV ++S D F++++D +T I T+ + +W + +P T L +
Sbjct: 148 SVKLLERSNHLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNPDETRLCSCTSDN 207
Query: 125 ASVKLW 130
++ W
Sbjct: 208 -QIRFW 212
Score = 74 (31.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 24/111 (21%), Positives = 46/111 (41%)
Query: 161 VLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSAS 220
V+ + S D I GS D I ++ + H + + + P + SAS
Sbjct: 576 VMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFI-SAS 634
Query: 221 DDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
D + +DA+ + + H V S+ G +GS DR++++++
Sbjct: 635 KDKRIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIFN 685
Score = 64 (27.6 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 18/73 (24%), Positives = 33/73 (45%)
Query: 20 VTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASAS 79
+T V E R L+T S D +K+W + +T GH + + +P S +
Sbjct: 146 ITSVKLLE-RSNHLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNPDETRLCSCT 204
Query: 80 LDSFVRVFDVDTN 92
D+ +R + + +N
Sbjct: 205 SDNQIRFWRIPSN 217
Score = 37 (18.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 280 SMTNHTDQVWGVSFRPLGGRVVSV-SDDKSISLYE 313
S+T + V GV F P ++++V S K + L++
Sbjct: 282 SITVKAESVSGVRFDPTN-KILAVQSTGKFVDLFK 315
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 240 (89.5 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 75/262 (28%), Positives = 118/262 (45%)
Query: 13 HEESVWAVTWVP-AT---ETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAA 68
H +V A+ + P AT + + L + + D +VKLW + + GH + V V
Sbjct: 271 HSTNVGAIVFHPKATVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMW 330
Query: 69 HPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVK 128
HPSG + D R++D++ I E V+ + F G+ LA GG A +
Sbjct: 331 HPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGS-LAGTGGLDAFGR 389
Query: 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 188
+WD T I L EG K + + +SP+G +A GS D T V+D+
Sbjct: 390 VWDLRTGRCIMFL-----EG--------HLKEIYGLNFSPNGYHVATGSGDNTCKVWDLR 436
Query: 189 RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248
+ K ++ + H V + + P L + + D ++ G S + ++GH V+
Sbjct: 437 QRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMG 496
Query: 249 VDASPDGAAITTGSSDRTVKLW 270
+D S DG I T S DRT KLW
Sbjct: 497 LDISLDGQLIATCSYDRTFKLW 518
Score = 219 (82.2 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 70/290 (24%), Positives = 122/290 (42%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIA--------ASASLDSF 83
LL T KLW D L T GH V ++ HP ++ AS + D
Sbjct: 244 LLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKATVSLDKKDVNLASCAADGS 303
Query: 84 VRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSI 143
V+++ ++++ +A +E V ++ + P G L G + W W+L A I
Sbjct: 304 VKLWSLESDEPVADIEGHSMRVARVMWHPSGRFL----GTTCYDHSW--RLWDLEAQEEI 357
Query: 144 PRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPV 203
EG K V +A+ DG G +D V+D+ + + LEGH +
Sbjct: 358 LHQEG--------HSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEI 409
Query: 204 RSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPD-GAAITTGS 262
L +SP V + D+T ++D + + + H + V V P+ G + TG+
Sbjct: 410 YGLNFSPNGYHVATGSGDNT-CKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGA 468
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
D T K+W + ++++ H +V G+ G + + S D++ L+
Sbjct: 469 YDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLW 518
Score = 187 (70.9 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 57/230 (24%), Positives = 96/230 (41%)
Query: 70 PSGIIAASASLDSFVRVFDV-DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVK 128
P+ + A+A +++ V D N + TL + V + F PK T V
Sbjct: 240 PNSKLLATACWSGLCKLWSVPDCNL-VHTLRGHSTNVGAIVFHPKATVSL----DKKDVN 294
Query: 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 188
L A + S+ E + + S + V V W P GR + D + ++D+
Sbjct: 295 LASCAADGSVKLWSLESDEPVADIEGHSMR--VARVMWHPSGRFLGTTCYDHSWRLWDLE 352
Query: 189 RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248
+ + H EGH V + + D + + D ++D + + GH +
Sbjct: 353 AQEEILHQEGHSKGVYDIAFH-TDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYG 411
Query: 249 VDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGG 298
++ SP+G + TGS D T K+WDL R + ++ H + V GV F P G
Sbjct: 412 LNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHG 461
Score = 166 (63.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 50/204 (24%), Positives = 88/204 (43%)
Query: 110 FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169
F P LA A S KLW NL+ TL R K +S+ D
Sbjct: 238 FSPNSKLLATACW-SGLCKLWSVPDCNLVHTL---RGHSTNVGAIVFHPKATVSLD-KKD 292
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
+C + DG++ ++ + + + +EGH M V +++ P R L + D ++D
Sbjct: 293 VNLASCAA-DGSVKLWSLESDEPVADIEGHSMRVARVMWHP-SGRFLGTTCYDHSWRLWD 350
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
E + + GH+ V + DG+ TG D ++WDL + + H +++
Sbjct: 351 LEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIY 410
Query: 290 GVSFRPLGGRVVSVSDDKSISLYE 313
G++F P G V + S D + +++
Sbjct: 411 GLNFSPNGYHVATGSGDNTCKVWD 434
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 239 (89.2 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 81/303 (26%), Positives = 139/303 (45%)
Query: 13 HEESVWAVTWVPATETRPAL--LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHP 70
H + + A++W P P + + S D +V++W + ERT TGH V +
Sbjct: 199 HSKWITALSWEPL-HANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGG 257
Query: 71 SGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLW 130
G++ SAS D ++V+ TL+ V M T A+ G +
Sbjct: 258 DGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS---TDYALRTGAFEPAEAS 313
Query: 131 DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRA 190
A +L +L + LK +++ S+ + L P+ R+ GS D T+ ++
Sbjct: 314 VNAQ-DLRGSL-----QELK--ERALSR-YNLVRGQGPE--RLVSGSDDFTLFLWSPAED 362
Query: 191 KF-LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSV 249
K L + GH + +V+SP D RV+ SAS D + ++D + ++ GH + V +
Sbjct: 363 KKPLARMTGHQALINQVVFSP-DSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI 421
Query: 250 DASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSI 309
S D + +GSSD T+K+WD+ + + H D+V+ V + P G RV S DK +
Sbjct: 422 AWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCL 481
Query: 310 SLY 312
++
Sbjct: 482 RIW 484
Score = 211 (79.3 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 76/264 (28%), Positives = 124/264 (46%)
Query: 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
GH V+SVA P+G AS S D+ VR +D+ T T + V + + P G L
Sbjct: 113 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKL 172
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW-----SPDGRR 172
A +G + + LWD +T + G T S K++ +++W +P+ R
Sbjct: 173 A-SGCKNGQILLWDPSTGKQV---------GRALTGHS---KWITALSWEPLHANPECRY 219
Query: 173 IACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG 232
+A S DG++ V+D T + L GH V L + +L+SAS D + ++ A
Sbjct: 220 VASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWG--GDGLLYSASQDRTIKVWRAHD 277
Query: 233 KSLVTAMSGHASWVLSVDASPDGAAITTGS---SDRTVKLWDLNMRAAMQSMTNHTDQVW 289
L + GH WV ++ S D A+ TG+ ++ +V DL R ++Q + +
Sbjct: 278 GVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEASVNAQDL--RGSLQELKERALSRY 334
Query: 290 GVSFRPLGG-RVVSVSDDKSISLY 312
+ R G R+VS SDD ++ L+
Sbjct: 335 NL-VRGQGPERLVSGSDDFTLFLW 357
Score = 185 (70.2 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 55/194 (28%), Positives = 95/194 (48%)
Query: 96 ATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKS 155
++LE V + F P G LA +G G +V+ WD +T T +G
Sbjct: 109 SSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDLSTETPHFTC-----QG------- 155
Query: 156 SSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHH-LEGHFMPVRSLVYSPV--D 212
+ +VLS++WSPDG+++A G +G I ++D + K + L GH + +L + P+ +
Sbjct: 156 -HRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHAN 214
Query: 213 P--RVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
P R + S+S D V ++D ++GHA V + DG + + S DRT+K+W
Sbjct: 215 PECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDGL-LYSASQDRTIKVW 273
Query: 271 DLNMRAAMQSMTNH 284
+ +++ H
Sbjct: 274 RAHDGVLCRTLQGH 287
Score = 179 (68.1 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 75/309 (24%), Positives = 130/309 (42%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD-MQLERTNTGHCLGVVSVA---- 67
H V +++W P + L +G + + LW P Q+ R TGH + +++
Sbjct: 156 HRHWVLSISWSPDGKK----LASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPL 211
Query: 68 -AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
A+P AS+S D VRV+D TL V +++ G L + +
Sbjct: 212 HANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDG--LLYSASQDRT 269
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSV-AWSPDGRRIACGSMDGTISVF 185
+K+W L TL + G + S + L A+ P + + G++
Sbjct: 270 IKVWRAHDGVLCRTL---QGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQEL 326
Query: 186 DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHAS 244
RA ++L VR P L S SDD + ++ AE K + M+GH +
Sbjct: 327 K-ERALSRYNL------VRGQ-----GPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQA 374
Query: 245 WVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVS 304
+ V SPD I + S D+++KLWD + S+ H V+ +++ +VS S
Sbjct: 375 LINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGS 434
Query: 305 DDKSISLYE 313
D ++ +++
Sbjct: 435 SDSTLKVWD 443
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 39/124 (31%), Positives = 63/124 (50%)
Query: 196 LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDG 255
LEGH V S+ +SP + L S S DT V +D ++ GH WVLS+ SPDG
Sbjct: 111 LEGHSEAVISVAFSPTG-KYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 169
Query: 256 AAITTGSSDRTVKLWDLNM-RAAMQSMTNHTDQVWGVSFRPLGGR-----VVSVSDDKSI 309
+ +G + + LWD + + +++T H+ + +S+ PL V S S D S+
Sbjct: 170 KKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSV 229
Query: 310 SLYE 313
+++
Sbjct: 230 RVWD 233
Score = 114 (45.2 bits), Expect = 0.00097, P = 0.00097
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 237 TAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPL 296
+++ GH+ V+SV SP G + +GS D TV+ WDL+ + H V +S+ P
Sbjct: 109 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPD 168
Query: 297 GGRVVSVSDDKSISLYEYS 315
G ++ S + I L++ S
Sbjct: 169 GKKLASGCKNGQILLWDPS 187
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 240 (89.5 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 80/269 (29%), Positives = 118/269 (43%)
Query: 6 LKSVENAHEESVWAVTWVP---ATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLG 62
LK H V V P A E + +G D VKLW ++ + TGH
Sbjct: 295 LKQTLRGHASYVGGVALRPGVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPH 354
Query: 63 VVS-VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAG 121
VS VA HPSG A+A DS R++D++ + E V + + G+ L V G
Sbjct: 355 RVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVL-VTG 413
Query: 122 GGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGT 181
G A ++WD T I L EG V V +SP+G IA GS D T
Sbjct: 414 GLDAFGRVWDLRTGRCIMFL-----EGHLGA--------VFGVDFSPNGFHIATGSQDNT 460
Query: 182 ISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSG 241
++D+ R + ++ + H + + Y L + S D+ ++ + + + G
Sbjct: 461 CKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQG 520
Query: 242 HASWVLSVDASPDGAAITTGSSDRTVKLW 270
H + V+SVD +P+ I T S DRT KLW
Sbjct: 521 HDNKVISVDIAPNSQYIATTSFDRTFKLW 549
Score = 213 (80.0 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 77/292 (26%), Positives = 127/292 (43%)
Query: 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPS------GIIA-ASASLDSF 83
+LLLT S KLW D +L++T GH V VA P ++A AS D
Sbjct: 274 SLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKADEENVVAMASGGHDGA 333
Query: 84 VRVFDVDTNASIATLEAS-PSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS 142
V+++ + SIA + P V ++ F P G LA A S S +LWD L
Sbjct: 334 VKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDS-SWRLWD-----LEQKTE 387
Query: 143 IPRPEG-LKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFM 201
+ EG KP V +++ DG + G +D V+D+ + + LEGH
Sbjct: 388 VLHQEGHAKP---------VHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLG 438
Query: 202 PVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPD-GAAITT 260
V + +SP + + D+T ++D + V + H + + V + G+ + T
Sbjct: 439 AVFGVDFSPNGFHIATGSQDNT-CKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVT 497
Query: 261 GSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
S D T K+W ++++ H ++V V P + + S D++ L+
Sbjct: 498 CSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLW 549
Score = 172 (65.6 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 58/211 (27%), Positives = 95/211 (45%)
Query: 114 GTTLAVAGGG-SASVKLWDTATWNLIATL-SIPRPEGLKPTDKSSSKKFVLSVAWSP--- 168
G T V+ S L T++W+ + L S+P E LK T + + +V VA P
Sbjct: 259 GDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCE-LKQTLRGHAS-YVGGVALRPGVK 316
Query: 169 -DGRRI---ACGSMDGTISVFDVTRAKFLHHLEGHFMP--VRSLVYSPVDPRVLFSASDD 222
D + A G DG + ++ + + + GH MP V + + P R L +A D
Sbjct: 317 ADEENVVAMASGGHDGAVKLWGFNNEESIADITGH-MPHRVSKVAFHP-SGRFLATACYD 374
Query: 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMT 282
+ ++D E K+ V GHA V + DG+ + TG D ++WDL + +
Sbjct: 375 SSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLE 434
Query: 283 NHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
H V+GV F P G + + S D + +++
Sbjct: 435 GHLGAVFGVDFSPNGFHIATGSQDNTCKIWD 465
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 238 (88.8 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 76/304 (25%), Positives = 139/304 (45%)
Query: 13 HEESVWAVTWVPATETRPAL--LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHP 70
H + + ++W P P + + S D +V++W + ER TGH V +
Sbjct: 198 HSKWITGLSWEPL-HMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGG 256
Query: 71 SGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLW 130
G++ SAS D ++V+ TL+ W T+A++ + +
Sbjct: 257 DGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGH--WV-------NTMALSTDYALRTGAF 306
Query: 131 DTATWNLIATLSIPRPEG-LKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
+ A AT++ +G LK + +S ++ L P+ R+ GS D T+ ++
Sbjct: 307 EPAE----ATVNAQDLQGSLKELKERASSRYNLVRGQGPE--RLVSGSDDFTLFLWSPAE 360
Query: 190 AKF-LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248
K L + GH + +++SP D R++ SAS D + ++D + ++ GH + V
Sbjct: 361 DKKPLARMTGHQALINQVLFSP-DSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQ 419
Query: 249 VDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKS 308
+ S D + +GSSD T+K+WD+ + + H D+V+ V + P G RV S DK
Sbjct: 420 IAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKC 479
Query: 309 ISLY 312
+ ++
Sbjct: 480 LRIW 483
Score = 208 (78.3 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 75/264 (28%), Positives = 123/264 (46%)
Query: 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
GH V+SVA P+G AS S D+ VR +D+ T T + V + + P G L
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKL 171
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW-----SPDGRR 172
A +G + V LWD +T L + R + K++ ++W +P+ R
Sbjct: 172 A-SGCKNGQVLLWDPSTG-----LQVGRT-------LTGHSKWITGLSWEPLHMNPECRY 218
Query: 173 IACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG 232
+A S DG++ V+D T + L GH V L + +L+SAS D + ++ A
Sbjct: 219 VASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG--GDGLLYSASQDRTIKVWRAHD 276
Query: 233 KSLVTAMSGHASWVLSVDASPDGAAITTGS---SDRTVKLWDLNMRAAMQSMTNHTDQVW 289
L + GH WV ++ S D A+ TG+ ++ TV DL + +++ + +
Sbjct: 277 GVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEATVNAQDL--QGSLKELKERASSRY 333
Query: 290 GVSFRPLGG-RVVSVSDDKSISLY 312
+ R G R+VS SDD ++ L+
Sbjct: 334 NL-VRGQGPERLVSGSDDFTLFLW 356
Score = 177 (67.4 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 74/309 (23%), Positives = 129/309 (41%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD-MQLERTNTGHCLGVVSVAAHPS 71
H V +++W P + L +G + V LW P +Q+ RT TGH + ++ P
Sbjct: 155 HRHWVLSISWSPDGKK----LASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPL 210
Query: 72 GI-----IAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
+ AS+S D VRV+D L V +++ G L + +
Sbjct: 211 HMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQDRT 268
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSV-AWSPDGRRIACGSMDGTISVF 185
+K+W L TL + G + S + L A+ P + + G++
Sbjct: 269 IKVWRAHDGVLCRTL---QGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKEL 325
Query: 186 DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHAS 244
RA ++L VR P L S SDD + ++ AE K + M+GH +
Sbjct: 326 K-ERASSRYNL------VRGQ-----GPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQA 373
Query: 245 WVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVS 304
+ V SPD + + S D+++KLWD + S+ H V+ +++ +VS S
Sbjct: 374 LINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGS 433
Query: 305 DDKSISLYE 313
D ++ +++
Sbjct: 434 SDSTLKVWD 442
Score = 176 (67.0 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 55/194 (28%), Positives = 92/194 (47%)
Query: 96 ATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKS 155
++LE V + F P G LA +G G +V+ WD LS P T K
Sbjct: 108 SSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWD---------LSTETPHF---TCKG 154
Query: 156 SSKKFVLSVAWSPDGRRIACGSMDGTISVFDV-TRAKFLHHLEGHFMPVRSLVYSPV--D 212
+ +VLS++WSPDG+++A G +G + ++D T + L GH + L + P+ +
Sbjct: 155 H-RHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMN 213
Query: 213 P--RVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
P R + S+S D V ++D ++GH V + DG + + S DRT+K+W
Sbjct: 214 PECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 272
Query: 271 DLNMRAAMQSMTNH 284
+ +++ H
Sbjct: 273 RAHDGVLCRTLQGH 286
Score = 160 (61.4 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 41/124 (33%), Positives = 64/124 (51%)
Query: 196 LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDG 255
LEGH V S+ +SP + L S S DT V +D ++ GH WVLS+ SPDG
Sbjct: 110 LEGHSEAVISVAFSPTG-KYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDG 168
Query: 256 AAITTGSSDRTVKLWDLNMRAAM-QSMTNHTDQVWGVSFRPLGGR-----VVSVSDDKSI 309
+ +G + V LWD + + +++T H+ + G+S+ PL V S S D S+
Sbjct: 169 KKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSV 228
Query: 310 SLYE 313
+++
Sbjct: 229 RVWD 232
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 238 (88.8 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 76/304 (25%), Positives = 139/304 (45%)
Query: 13 HEESVWAVTWVPATETRPAL--LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHP 70
H + + ++W P P + + S D +V++W + ER TGH V +
Sbjct: 200 HSKWITGLSWEPL-HMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGG 258
Query: 71 SGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLW 130
G++ SAS D ++V+ TL+ W T+A++ + +
Sbjct: 259 DGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGH--WV-------NTMALSTDYALRTGAF 308
Query: 131 DTATWNLIATLSIPRPEG-LKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
+ A AT++ +G LK + +S ++ L P+ R+ GS D T+ ++
Sbjct: 309 EPAE----ATVNAQDLQGSLKELKERASSRYNLVRGQGPE--RLVSGSDDFTLFLWSPAE 362
Query: 190 AKF-LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248
K L + GH + +++SP D R++ SAS D + ++D + ++ GH + V
Sbjct: 363 DKKPLARMTGHQALINQVLFSP-DSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQ 421
Query: 249 VDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKS 308
+ S D + +GSSD T+K+WD+ + + H D+V+ V + P G RV S DK
Sbjct: 422 IAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKC 481
Query: 309 ISLY 312
+ ++
Sbjct: 482 LRIW 485
Score = 208 (78.3 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 75/264 (28%), Positives = 123/264 (46%)
Query: 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
GH V+SVA P+G AS S D+ VR +D+ T T + V + + P G L
Sbjct: 114 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKL 173
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW-----SPDGRR 172
A +G + + LWD +T + G T S K++ ++W +P+ R
Sbjct: 174 A-SGCKNGQILLWDPSTGTQV---------GRTLTGHS---KWITGLSWEPLHMNPECRY 220
Query: 173 IACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG 232
+A S DG++ V+D T + L GH V L + +L+SAS D + ++ A
Sbjct: 221 VASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG--GDGLLYSASQDRTIKVWRAHD 278
Query: 233 KSLVTAMSGHASWVLSVDASPDGAAITTGS---SDRTVKLWDLNMRAAMQSMTNHTDQVW 289
L + GH WV ++ S D A+ TG+ ++ TV DL + +++ + +
Sbjct: 279 GVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEATVNAQDL--QGSLKELKERASSRY 335
Query: 290 GVSFRPLGG-RVVSVSDDKSISLY 312
+ R G R+VS SDD ++ L+
Sbjct: 336 NL-VRGQGPERLVSGSDDFTLFLW 358
Score = 178 (67.7 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 56/194 (28%), Positives = 92/194 (47%)
Query: 96 ATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKS 155
++LE V + F P G LA +G G +V+ WD LS P T K
Sbjct: 110 SSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWD---------LSTETPHF---TCKG 156
Query: 156 SSKKFVLSVAWSPDGRRIACGSMDGTISVFDV-TRAKFLHHLEGHFMPVRSLVYSPV--D 212
+ +VLS++WSPDG+++A G +G I ++D T + L GH + L + P+ +
Sbjct: 157 H-RHWVLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMN 215
Query: 213 P--RVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
P R + S+S D V ++D ++GH V + DG + + S DRT+K+W
Sbjct: 216 PECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 274
Query: 271 DLNMRAAMQSMTNH 284
+ +++ H
Sbjct: 275 RAHDGVLCRTLQGH 288
Score = 173 (66.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 73/309 (23%), Positives = 128/309 (41%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD-MQLERTNTGHCLGVVSVAAHPS 71
H V +++W P + L +G + + LW P Q+ RT TGH + ++ P
Sbjct: 157 HRHWVLSISWSPDGKK----LASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPL 212
Query: 72 GI-----IAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
+ AS+S D VRV+D L V +++ G L + +
Sbjct: 213 HMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQDRT 270
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSV-AWSPDGRRIACGSMDGTISVF 185
+K+W L TL + G + S + L A+ P + + G++
Sbjct: 271 IKVWRAHDGVLCRTL---QGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKEL 327
Query: 186 DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHAS 244
RA ++L VR P L S SDD + ++ AE K + M+GH +
Sbjct: 328 K-ERASSRYNL------VRGQ-----GPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQA 375
Query: 245 WVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVS 304
+ V SPD + + S D+++KLWD + S+ H V+ +++ +VS S
Sbjct: 376 LINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGS 435
Query: 305 DDKSISLYE 313
D ++ +++
Sbjct: 436 SDSTLKVWD 444
Score = 160 (61.4 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 40/124 (32%), Positives = 64/124 (51%)
Query: 196 LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDG 255
LEGH V S+ +SP + L S S DT V +D ++ GH WVLS+ SPDG
Sbjct: 112 LEGHSEAVISVAFSPTG-KYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDG 170
Query: 256 AAITTGSSDRTVKLWDLNMRAAM-QSMTNHTDQVWGVSFRPLGGR-----VVSVSDDKSI 309
+ +G + + LWD + + +++T H+ + G+S+ PL V S S D S+
Sbjct: 171 KKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSV 230
Query: 310 SLYE 313
+++
Sbjct: 231 RVWD 234
Score = 114 (45.2 bits), Expect = 0.00098, P = 0.00098
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 237 TAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPL 296
+++ GH+ V+SV SP G + +GS D TV+ WDL+ + H V +S+ P
Sbjct: 110 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPD 169
Query: 297 GGRVVSVSDDKSISLYEYS 315
G ++ S + I L++ S
Sbjct: 170 GKKLASGCKNGQILLWDPS 188
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 238 (88.8 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 74/267 (27%), Positives = 121/267 (45%)
Query: 48 DDMQLERTNTGHCLGVVSVAA-HPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVW 106
+D LER GH V+S A +P+ A+ S D + ++++ A +
Sbjct: 6 EDPTLERHFKGH-KDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVIT 64
Query: 107 QMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW 166
+ F P G+ +A + +V+LW T SI +G K+ + V SV +
Sbjct: 65 GVNFAPSGSLVA-SSSRDQTVRLW---------TPSI---KGESTVFKAHTAS-VRSVHF 110
Query: 167 SPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVH 226
S DG+R+ S D ++ V+ V R KFL+ L H VR +SP D R++ S DD V
Sbjct: 111 SRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSP-DGRLIASCGDDRTVR 169
Query: 227 MYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTD 286
++D + + + VD + G I + +D T+K+WD+ +Q H
Sbjct: 170 LWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNA 229
Query: 287 QVWGVSFRPLGGRVVSVSDDKSISLYE 313
V SF P G ++S S D +I + +
Sbjct: 230 GVNCFSFHPSGNYLISGSSDSTIKILD 256
Score = 224 (83.9 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 75/279 (26%), Positives = 121/279 (43%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H + + V + P+ +L+ + S D+TV+LW P H V SV G
Sbjct: 59 HTDVITGVNFAPSG----SLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDG 114
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
+AS D V+V+ V+ + +L + V +F P G +A G +V+LWDT
Sbjct: 115 QRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGD-DRTVRLWDT 173
Query: 133 ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF 192
++ I TD S FV ++ G IA D TI ++D+ K
Sbjct: 174 SSHQCINIF----------TDYGGSATFV---DFNSSGTCIASSGADNTIKIWDIRTNKL 220
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA-EGKSLVTAMSGHASWVLSVDA 251
+ H + H V + P L S S D+ + + D EG+ L+ + GH VL+V
Sbjct: 221 IQHYKVHNAGVNCFSFHP-SGNYLISGSSDSTIKILDLLEGR-LIYTLHGHKGPVLTVTF 278
Query: 252 SPDGAAITTGSSDRTVKLWDLNMRAA--MQSMTNHTDQV 288
S DG +G +D V +W N + + ++ H+ +V
Sbjct: 279 SRDGDLFASGGADSQVLMWKTNFDSLNYRELLSKHSKRV 317
Score = 184 (69.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 67/282 (23%), Positives = 119/282 (42%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L TGS D+++ +W GH + V PSG + AS+S D VR++
Sbjct: 33 LATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIK 92
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+A + V + F G L A SVK+W + R + L
Sbjct: 93 GESTVFKAHTASVRSVHFSRDGQRLVTASDDK-SVKVW-----------GVERKKFLYSL 140
Query: 153 DKSSSKKFVLSVAWSPDGRRIA-CGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
++ ++ +V +SPDGR IA CG D T+ ++D + + ++ + + ++
Sbjct: 141 NRHTN--WVRCARFSPDGRLIASCGD-DRTVRLWDTSSHQCINIFTDYGGSATFVDFNSS 197
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
+ S +D+T + ++D L+ H + V P G + +GSSD T+K+ D
Sbjct: 198 GTCIASSGADNT-IKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILD 256
Query: 272 LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
L + ++ H V V+F G S D + +++
Sbjct: 257 LLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWK 298
Score = 183 (69.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 44/158 (27%), Positives = 80/158 (50%)
Query: 159 KFVLSVA-WSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLF 217
K V+S A ++P+ +++A GS D ++ ++++ GH + + ++P V
Sbjct: 18 KDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVAS 77
Query: 218 SASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA 277
S+ D T V ++ K T H + V SV S DG + T S D++VK+W + +
Sbjct: 78 SSRDQT-VRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKF 136
Query: 278 MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
+ S+ HT+ V F P G + S DD+++ L++ S
Sbjct: 137 LYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTS 174
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 236 (88.1 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 65/209 (31%), Positives = 103/209 (49%)
Query: 105 VWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSV 164
V +QF P G LA A +V+LW IP G K ++ + V SV
Sbjct: 21 VTSVQFSPHGNLLASASR-DRTVRLW------------IPDKRG-KFSEFKAHTAPVRSV 66
Query: 165 AWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTH 224
+S DG+ +A S D +I V+ + R +FL+ L H VR +SP D R++ S S+D
Sbjct: 67 DFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKT 125
Query: 225 VHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNH 284
+ ++D K V S + VD +P G I + SD+TVK+WD+ + +Q H
Sbjct: 126 IKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVH 185
Query: 285 TDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ V +SF P G +++ S D ++ + +
Sbjct: 186 SGGVNCISFHPSGNYLITASSDGTLKILD 214
Score = 205 (77.2 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 74/262 (28%), Positives = 109/262 (41%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H++ V +V + P LL + S D TV+LW PD H V SV G
Sbjct: 17 HKDVVTSVQFSPHGN----LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADG 72
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
A+AS D ++V+ + + +L V +F P G L V+ ++K+WDT
Sbjct: 73 QFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWDT 131
Query: 133 ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF 192
+ S S F V ++P G IA D T+ V+DV K
Sbjct: 132 TNKQCVNNFS-------------DSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKL 178
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA-EGKSLVTAMSGHASWVLSVDA 251
L H + H V + + P L +AS D + + D EG+ L+ + GH V +V
Sbjct: 179 LQHYQVHSGGVNCISFHP-SGNYLITASSDGTLKILDLLEGR-LIYTLQGHTGPVFTVSF 236
Query: 252 SPDGAAITTGSSDRTVKLWDLN 273
S G +G +D V LW N
Sbjct: 237 SKGGELFASGGADTQVLLWRTN 258
Score = 194 (73.4 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 70/255 (27%), Positives = 107/255 (41%)
Query: 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
GH V SV P G + ASAS D VR++ D + +A + V + F G L
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFL 75
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS 177
A A S+K+W + +L + T KF SPDGR I S
Sbjct: 76 ATASEDK-SIKVWSMYRQRFLYSL-------YRHTHWVRCAKF------SPDGRLIVSCS 121
Query: 178 MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT 237
D TI ++D T + +++ + ++P + + SD T V ++D L+
Sbjct: 122 EDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQT-VKVWDVRVNKLLQ 180
Query: 238 AMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLG 297
H+ V + P G + T SSD T+K+ DL + ++ HT V+ VSF G
Sbjct: 181 HYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGG 240
Query: 298 GRVVSVSDDKSISLY 312
S D + L+
Sbjct: 241 ELFASGGADTQVLLW 255
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 38/126 (30%), Positives = 57/126 (45%)
Query: 7 KSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV 66
K N +SV +V + + GS D+TVK+W +L + H GV +
Sbjct: 134 KQCVNNFSDSVGFANFVDFNPSGTCIASAGS-DQTVKVWDVRVNKLLQHYQVHSGGVNCI 192
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
+ HPSG +AS D +++ D+ I TL+ V+ + F KG L +GG
Sbjct: 193 SFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS-KGGELFASGGADTQ 251
Query: 127 VKLWDT 132
V LW T
Sbjct: 252 VLLWRT 257
>UNIPROTKB|F1NC11 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:AADN02037856
EMBL:AADN02037857 EMBL:AADN02037858 EMBL:AADN02037859
EMBL:AADN02037860 IPI:IPI00583802 Ensembl:ENSGALT00000023879
Uniprot:F1NC11
Length = 938
Score = 241 (89.9 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 74/283 (26%), Positives = 126/283 (44%)
Query: 33 LLTGSLDETVKLWRPDDMQLERT-NTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
+L+G+ E+VK+W +Q RT + + L + V I+ ++++D+ +
Sbjct: 425 VLSGAA-ESVKIWNRSTLQCIRTMDCEYALCSLFVPGDRQVIVGTKTGK---LQLYDLAS 480
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIAT-LSIPRPEGLK 150
+ TL A VW + P V GG VK WD + L+ SI + +K
Sbjct: 481 GTLMETLNAHDGAVWSIALSPDQRGF-VTGGADKCVKFWD---FELVKDESSIQKRLSMK 536
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
+ VL V +SP+ + +A +D T+ VF KF L GH +PV + S
Sbjct: 537 QVRILQLDEDVLCVRYSPNQKLLAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCMDIS- 595
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
D ++ + S D +V ++ + ++ H V+ + T D +K W
Sbjct: 596 YDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQFVAKSHLFFTAGKDNKIKQW 655
Query: 271 DLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
D + +Q++ H +VW ++ P G VVS S DKS+ L+E
Sbjct: 656 DADKFEHIQTLEGHHQEVWCLALSPNGDYVVSASHDKSLRLWE 698
Score = 172 (65.6 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 41/147 (27%), Positives = 71/147 (48%)
Query: 167 SPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVH 226
SPDG +A G DG+I +F + + GH V +L Y + R L S S DT V
Sbjct: 73 SPDGLHLAVGYEDGSIRIFSLLSGEASVAFNGHKAAVTALQYDQLGGR-LVSGSKDTDVI 131
Query: 227 MYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTD 286
++D +S + + GH V V + + T D VK WDL+ + +++ H
Sbjct: 132 VWDVINESGLYRLKGHKDAVTQVLFLKEKNLLVTSGKDTLVKWWDLDTQHCFKTLVGHRT 191
Query: 287 QVWGVSFRPLGGRVVSVSDDKSISLYE 313
+VWG++ R+++ + D + +++
Sbjct: 192 EVWGMALVSEEKRLITGTADSELRVWD 218
Score = 161 (61.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 78/286 (27%), Positives = 124/286 (43%)
Query: 24 PATETRPALLLTGSLDE--TVKLWR--PDDMQLER-TNTGHCLGVVSVAAHPSGIIAASA 78
P E + LLL ++ E T+ L P ++ R T GH V ++A I S
Sbjct: 369 PKEELKIVLLLQNNIIELYTLNLSAQVPQAVRASRITIGGHRSDVRTLAFSSDNIAVLSG 428
Query: 79 SLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLI 138
+ +S V++++ T I T++ + + + F P G + G + ++L+D A+ L+
Sbjct: 429 AAES-VKIWNRSTLQCIRTMDCEYA-LCSL-FVP-GDRQVIVGTKTGKLQLYDLASGTLM 484
Query: 139 ATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEG 198
TL+ +G V S+A SPD R G D + +D K ++
Sbjct: 485 ETLNAH--DGA-----------VWSIALSPDQRGFVTGGADKCVKFWDFELVKDESSIQK 531
Query: 199 HFM--PVRSLV---------YSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVL 247
VR L YSP + S D T V ++ + ++ GH VL
Sbjct: 532 RLSMKQVRILQLDEDVLCVRYSPNQKLLAVSLLDCT-VKVFYTDTLKFFLSLYGHKLPVL 590
Query: 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSF 293
+D S DGA I TGS+DR VK+W L+ +S+ H D V + F
Sbjct: 591 CMDISYDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQF 636
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 236 (88.1 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 86/255 (33%), Positives = 117/255 (45%)
Query: 33 LLTGSLDETVKLWR-PDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
L TG + V LW D L T +GH V V HPSG ASAS D+ R++DV+
Sbjct: 274 LATGGAEGQVNLWSLSQDTPLA-TLSGHTQRVCRVDFHPSGRFLASASEDTSWRLWDVEK 332
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ E V+ + F+ G+ LA AG S ++WD T I L +KP
Sbjct: 333 RTELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIG-RIWDLRTGRTIMILDGHMDGHIKP 391
Query: 152 T---DKSSSKKFVLSVA---WSP--DGRRIA-CGSMDG-TISVFDVTRAKFLHH-LEGHF 200
D S VLS + W D R++ G + T +V D+ K L L+G
Sbjct: 392 IYALDWGSDGHRVLSASADGWIKCWDVRKVQRTGGVGAHTSAVSDMRWFKGLDGPLDGVP 451
Query: 201 MPV--RSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAI 258
+ V + L S+ D V++Y A+ +LV ++SGH V SVD S DG I
Sbjct: 452 LGVDEKGQAMPKKSGTFLVSSGFDHKVNIYSADDWALVQSLSGHTGPVASVDVSRDGRWI 511
Query: 259 TTGSSDRTVKLWDLN 273
+G DRTVKLW N
Sbjct: 512 VSGGHDRTVKLWGRN 526
Score = 156 (60.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 52/210 (24%), Positives = 95/210 (45%)
Query: 109 QFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVA-WS 167
+ P G T+A G VKL+ NL T+++ R K + L + S
Sbjct: 213 RISPNGETVATGNWGG-QVKLFSIP--NLDETMNL-RGHTNKVSGMCWFPGATLQESNVS 268
Query: 168 PDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 227
+ +A G +G ++++ +++ L L GH V + + P R L SAS+DT +
Sbjct: 269 AESVNLATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHP-SGRFLASASEDTSWRL 327
Query: 228 YDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTD- 286
+D E ++ + GH+ V +V + DG+ + + D ++WDL + + H D
Sbjct: 328 WDVEKRTELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTIMILDGHMDG 387
Query: 287 ---QVWGVSFRPLGGRVVSVSDDKSISLYE 313
++ + + G RV+S S D I ++
Sbjct: 388 HIKPIYALDWGSDGHRVLSASADGWIKCWD 417
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 56/234 (23%), Positives = 101/234 (43%)
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
P+G A+ + V++F + L ++V M + P G TL + + SV L
Sbjct: 216 PNGETVATGNWGGQVKLFSIPNLDETMNLRGHTNKVSGMCWFP-GATLQESNVSAESVNL 274
Query: 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
+ S+ + L + + V V + P GR +A S D + ++DV +
Sbjct: 275 ATGGAEGQVNLWSLSQDTPLATLSGHTQR--VCRVDFHPSGRFLASASEDTSWRLWDVEK 332
Query: 190 AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAE-GKSLVTA---MSGHASW 245
L EGH V ++ ++ D +L SA D+ ++D G++++ M GH
Sbjct: 333 RTELLLQEGHSRGVFAVSFNG-DGSLLASAGQDSIGRIWDLRTGRTIMILDGHMDGHIKP 391
Query: 246 VLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVS-FRPLGG 298
+ ++D DG + + S+D +K WD+ + HT V + F+ L G
Sbjct: 392 IYALDWGSDGHRVLSASADGWIKCWDVRKVQRTGGVGAHTSAVSDMRWFKGLDG 445
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 217 (81.4 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 72/260 (27%), Positives = 118/260 (45%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H +V AV W A L+ T S D TVK+WR D L RT +GH V ++A
Sbjct: 250 HTNAVTAVRWGGA-----GLIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTDY 304
Query: 73 IIAASASLDSFVRVFDVD-TNASIATLEASPSEVWQMQ-FDPKGTTLAVAGGGSASVKLW 130
++ F V D ++ S++T E S + + Q P V+ ++ LW
Sbjct: 305 VLRTGP----FHPVKDRSKSHLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYLW 360
Query: 131 DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRA 190
N + R G + V V +SPD + IA S D ++ ++ +
Sbjct: 361 RN---N--QNKCVERMTG--------HQNVVNDVKYSPDVKLIASASFDKSVRLWRASDG 407
Query: 191 KFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVD 250
+++ GH V ++ +S D R++ S S D+ + ++ + K L + GHA V VD
Sbjct: 408 QYMATFRGHVQAVYTVAWS-ADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVD 466
Query: 251 ASPDGAAITTGSSDRTVKLW 270
+PDG+ + +G D+ +KLW
Sbjct: 467 WAPDGSRVASGGKDKVIKLW 486
Score = 205 (77.2 bits), Expect = 5.9e-19, Sum P(2) = 5.9e-19
Identities = 47/142 (33%), Positives = 73/142 (51%)
Query: 173 IACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG 232
++C S D T+ ++ + K + + GH V + YSP D +++ SAS D V ++ A
Sbjct: 349 VSC-SDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSP-DVKLIASASFDKSVRLWRASD 406
Query: 233 KSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVS 292
+ GH V +V S D I +GS D T+K+W + + Q + H D+V+GV
Sbjct: 407 GQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVD 466
Query: 293 FRPLGGRVVSVSDDKSISLYEY 314
+ P G RV S DK I L+ Y
Sbjct: 467 WAPDGSRVASGGKDKVIKLWAY 488
Score = 184 (69.8 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 59/172 (34%), Positives = 87/172 (50%)
Query: 105 VWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSV 164
V + F P G LA +G G +V+LWD L+ P + K++VL V
Sbjct: 122 VVSLNFSPDGAHLA-SGSGDTTVRLWD---------LNTETPH----FTCTGHKQWVLCV 167
Query: 165 AWSPDGRRIACGSMDGTISVFDV-TRAKFLHHLEGHFMPVRSLVYSPV--DP--RVLFSA 219
+W+PDG+R+A G G+I ++D T + L GH + L + P DP R L SA
Sbjct: 168 SWAPDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASA 227
Query: 220 SDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
S D ++D + G+ L+ ++GH + V +V G I T S DRTVK+W
Sbjct: 228 SGDGDCRIWDVKLGQCLMN-IAGHTNAVTAVRWGGAGL-IYTSSKDRTVKMW 277
Score = 145 (56.1 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 237 TAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPL 296
++M GHA V+S++ SPDGA + +GS D TV+LWDLN + T H V VS+ P
Sbjct: 113 SSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPD 172
Query: 297 GGRVVSVSDDKSISLYE 313
G R+ S SI +++
Sbjct: 173 GKRLASGCKAGSIIIWD 189
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 40/126 (31%), Positives = 60/126 (47%)
Query: 7 KSVEN--AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVV 64
K VE H+ V V + P + L+ + S D++V+LWR D Q T GH V
Sbjct: 366 KCVERMTGHQNVVNDVKYSPDVK----LIASASFDKSVRLWRASDGQYMATFRGHVQAVY 421
Query: 65 SVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGS 124
+VA + S S DS ++V+ V T L EV+ + + P G+ +A +GG
Sbjct: 422 TVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVA-SGGKD 480
Query: 125 ASVKLW 130
+KLW
Sbjct: 481 KVIKLW 486
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 38/158 (24%), Positives = 77/158 (48%)
Query: 161 VLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSAS 220
V+S+ +SPDG +A GS D T+ ++D+ GH V + ++P D + L S
Sbjct: 122 VVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAP-DGKRLASGC 180
Query: 221 DDTHVHMYDAE-GKSLVTAMSGHASWV--LSVDA---SPDGAAITTGSSDRTVKLWDLNM 274
+ ++D E G+ +SGH + L+ + P+ + + S D ++WD+ +
Sbjct: 181 KAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKL 240
Query: 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+ ++ HT+ V V + G + + S D+++ ++
Sbjct: 241 GQCLMNIAGHTNAVTAVRWGG-AGLIYTSSKDRTVKMW 277
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 196 LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDG 255
+ GH V SL +SP D L S S DT V ++D ++ +GH WVL V +PDG
Sbjct: 115 MPGHAEAVVSLNFSP-DGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDG 173
Query: 256 AAITTGSSDRTVKLWD 271
+ +G ++ +WD
Sbjct: 174 KRLASGCKAGSIIIWD 189
Score = 117 (46.2 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 210 PVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKL 269
P + L S SDD ++++ V M+GH + V V SPD I + S D++V+L
Sbjct: 342 PDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRL 401
Query: 270 WDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
W + M + H V+ V++ +VS S D ++ ++
Sbjct: 402 WRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVW 444
Score = 84 (34.6 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 253 PDGA-AITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISL 311
PD ++ + S D T+ LW N ++ MT H + V V + P + S S DKS+ L
Sbjct: 342 PDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRL 401
Query: 312 YEYS 315
+ S
Sbjct: 402 WRAS 405
Score = 81 (33.6 bits), Expect = 5.9e-19, Sum P(2) = 5.9e-19
Identities = 34/136 (25%), Positives = 55/136 (40%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLE-RTNTGH-----CLGVVSV 66
H++ V V+W P + L +G ++ +W P+ Q + R +GH CL
Sbjct: 160 HKQWVLCVSWAPDGKR----LASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPY 215
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
P ASAS D R++DV + + + V +++ G L +
Sbjct: 216 HRDPECRKLASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWG--GAGLIYTSSKDRT 273
Query: 127 VKLWDTATWNLIATLS 142
VK+W A L T S
Sbjct: 274 VKMWRAADGILCRTFS 289
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 231 (86.4 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 74/249 (29%), Positives = 115/249 (46%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL + S D T+KLW + RT GH V SVA P+G SAS D +++++V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVAT 223
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPR------ 145
+ T V ++ + GT LA +V++W AT A L
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQ-TVRVWVVATKECKAELREHEHVVECI 282
Query: 146 ---PEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMP 202
PE PT ++ + P G + GS D TI ++D++ L L GH
Sbjct: 283 SWAPESAHPTISEATGS-ENKKSGKP-GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNW 340
Query: 203 VRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGS 262
VR +++ P R + S +DD + ++D + K + +S H +V S+D + TGS
Sbjct: 341 VRGVLFHP-GGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGS 399
Query: 263 SDRTVKLWD 271
D+TVK+W+
Sbjct: 400 VDQTVKVWE 408
Score = 221 (82.9 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 85/311 (27%), Positives = 136/311 (43%)
Query: 27 ETRPALLLTGSLDET--VKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFV 84
E + + L G + + K W P + + +GH V V HP + SAS D+ +
Sbjct: 74 EAKEEITLGGPVGQKRDPKEWIPRPPE-KYALSGHRSPVTRVIFHPVFSLMVSASEDATI 132
Query: 85 RVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIP 144
+V+D + TL+ V + FD G LA ++KLWD + I T+
Sbjct: 133 KVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSA-DMTIKLWDFQGFECIRTM--- 188
Query: 145 RPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVR 204
G D + S SVA P+G I S D T+ +++V + GH VR
Sbjct: 189 --HG---HDHNVS-----SVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVR 238
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAIT----- 259
+V D +L S S+D V ++ K + H V + +P+ A T
Sbjct: 239 -MVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEAT 297
Query: 260 ---------------TGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGR-VVSV 303
+GS D+T+K+WD++ + ++ H + V GV F P GGR VVS
Sbjct: 298 GSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHP-GGRFVVSC 356
Query: 304 SDDKSISLYEY 314
+DDK++ +++Y
Sbjct: 357 ADDKTLRIWDY 367
Score = 131 (51.2 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 29/99 (29%), Positives = 54/99 (54%)
Query: 216 LFSASDDTHVHMYD-AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
L S S D + M+D + G L+T + GH +WV V P G + + + D+T+++WD
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLV-GHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKN 369
Query: 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ M++++ H V + F VV+ S D+++ ++E
Sbjct: 370 KRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 230 (86.0 bits), Expect = 8.4e-19, Sum P(2) = 8.4e-19
Identities = 70/240 (29%), Positives = 113/240 (47%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L +GS + KL + +T GH V + P S S D+ R++ ++T
Sbjct: 652 LNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETM 711
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+++ + VW + F P G A A + +LW T N I+ L I T
Sbjct: 712 SNLVCYKGHNFPVWDVSFSPFGFYFATASH-DRTARLWTT---NHISPLRIF-------T 760
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
S +V + P+ +A GS D + ++++ K + GH P+ ++ +SP D
Sbjct: 761 GHLSDCN---TVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSP-D 816
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
R+L +A +DT V ++D V M GH V S+D S DG+ + +GSSD TV+LWD+
Sbjct: 817 GRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDV 876
Score = 159 (61.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 41/153 (26%), Positives = 70/153 (45%)
Query: 161 VLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSAS 220
V V++SP G A S D T ++ L GH ++ + P + L + S
Sbjct: 724 VWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHP-NINYLATGS 782
Query: 221 DDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS 280
+D +++ + V GH + + +V SPDG + T D +V LWDL+ ++
Sbjct: 783 NDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKK 842
Query: 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
M HT V+ + F G + S S D ++ L++
Sbjct: 843 MDGHTKCVYSLDFSCDGSILASGSSDCTVRLWD 875
Score = 156 (60.0 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 47/156 (30%), Positives = 71/156 (45%)
Query: 35 TGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNAS 94
T S D T +LW + + R TGH +V HP+ A+ S D R++++ T
Sbjct: 738 TASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKC 797
Query: 95 IATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDK 154
+ + ++ + F P G LA AG + SV LWD +T G K
Sbjct: 798 VRIFMGHRAPIYTVAFSPDGRLLATAGEDT-SVILWDLST-------------GKKVKKM 843
Query: 155 SSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRA 190
K V S+ +S DG +A GS D T+ ++DV +A
Sbjct: 844 DGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVKKA 879
Score = 155 (59.6 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 40/116 (34%), Positives = 54/116 (46%)
Query: 198 GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAA 257
GH PV +SP D + L S S+DT ++ E S + GH V V SP G
Sbjct: 677 GHSGPVYGCSFSP-DSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFY 735
Query: 258 ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
T S DRT +LW N + ++ T H V F P + + S+DKS L+E
Sbjct: 736 FATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWE 791
Score = 145 (56.1 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 38/155 (24%), Positives = 73/155 (47%)
Query: 161 VLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSAS 220
V ++SPD + + S D T ++ + L +GH PV + +SP +AS
Sbjct: 682 VYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFG-FYFATAS 740
Query: 221 DDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS 280
D ++ S + +GH S +V P+ + TGS+D++ +LW++ ++
Sbjct: 741 HDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRI 800
Query: 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
H ++ V+F P G + + +D S+ L++ S
Sbjct: 801 FMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLS 835
Score = 43 (20.2 bits), Expect = 8.4e-19, Sum P(2) = 8.4e-19
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 28 TRPALLLTGSL-DETVKLWRPDDMQLER 54
++ A L+ G D +VK+W +M+ +R
Sbjct: 567 SKDAQLVAGGFSDSSVKIWNLKEMKEQR 594
Score = 40 (19.1 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 119 VAGGGS-ASVKLWD 131
VAGG S +SVK+W+
Sbjct: 573 VAGGFSDSSVKIWN 586
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 238 (88.8 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 72/275 (26%), Positives = 131/275 (47%)
Query: 5 GLKSVE-NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGH---- 59
G K +E AHE+ V + +T+ R + T S+D+ VK+W +L T H
Sbjct: 647 GEKLLEIKAHEDEVLCCAF--STDDR--FIATCSVDKKVKIWNSMTGELVHTYDEHSEQV 702
Query: 60 -CLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLA 118
C + + H ++ A+ S D F++++D++ T+ + V +F P LA
Sbjct: 703 NCCHFTNSSHH---LLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLA 759
Query: 119 VAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSV-AWSPDGRRIACGS 177
++KLWD + N ++++ + L D + ++ +WS DG RI +
Sbjct: 760 SCSA-DGTLKLWDATSANERKSINV-KQFFLNLEDPQEDMEVIVKCCSWSADGARIMVAA 817
Query: 178 MDGTISVFDVTRAKFLHHLE-GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLV 236
+ I +FD+ + L + GH ++ +SP + + + S V +++ + +S V
Sbjct: 818 KN-KIFLFDIHTSGLLGEIHTGHHSTIQYCDFSPQNHLAVVALSQYC-VELWNTDSRSKV 875
Query: 237 TAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
GH SWV V SPDG++ T S D+T++LW+
Sbjct: 876 ADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWE 910
Score = 158 (60.7 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 48/156 (30%), Positives = 73/156 (46%)
Query: 161 VLSVAWSPDGRRIA-CGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSA 219
V +S DG+RIA CG+ D T+ VF + L ++ H V +S D R + +
Sbjct: 618 VYHACFSEDGQRIASCGA-DKTLQVFKAETGEKLLEIKAHEDEVLCCAFS-TDDRFIATC 675
Query: 220 SDDTHVHMYDAEGKSLVTAMSGHASWV--LSVDASPDGAAITTGSSDRTVKLWDLNMRAA 277
S D V ++++ LV H+ V S + TGSSD +KLWDLN +
Sbjct: 676 SVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKEC 735
Query: 278 MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+M HT+ V F P + S S D ++ L++
Sbjct: 736 RNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWD 771
Score = 153 (58.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 68/290 (23%), Positives = 123/290 (42%)
Query: 39 DETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATL 98
D+T+++++ + + H V+ A A+ S+D V++++ T + T
Sbjct: 636 DKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTY 695
Query: 99 EASPSEVWQMQFDPKGTTLAVAGGGS-ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSS 157
+ +V F L +A G S +KLWD T+ T+ +
Sbjct: 696 DEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTM-------FGHTNSVNH 748
Query: 158 KKFVLSVAWSPDGRRIACGSMDGTISVFDVTRA---------KFLHHLEGHFMPVRSLV- 207
+F SPD + +A S DGT+ ++D T A +F +LE + +V
Sbjct: 749 CRF------SPDDKLLASCSADGTLKLWDATSANERKSINVKQFFLNLEDPQEDMEVIVK 802
Query: 208 ---YSPVDPRVLFSASDDTHVHMYDAEGKSLVTAM-SGHASWVLSVDASPDGAAITTGSS 263
+S R++ +A + + ++D L+ + +GH S + D SP S
Sbjct: 803 CCSWSADGARIMVAAKNK--IFLFDIHTSGLLGEIHTGHHSTIQYCDFSPQNHLAVVALS 860
Query: 264 DRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
V+LW+ + R+ + H V GV F P G ++ SDD++I L+E
Sbjct: 861 QYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWE 910
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 228 (85.3 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 82/308 (26%), Positives = 142/308 (46%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H ++ +V + P E L + + D + +W D ++T GH L + VA
Sbjct: 38 HSAAISSVKFSPNGEW----LASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDS 93
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
SAS D ++V+D+ + + TL+ V+ F+P + L V+G SVK+W+
Sbjct: 94 SRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPP-SNLIVSGSFDESVKIWEV 152
Query: 133 ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF 192
T + TLS +D S+ F + +G I GS DG ++D +
Sbjct: 153 KTGKCLKTLSAH-------SDPISAVNF------NCNGSLIVSGSYDGLCRIWDAASGQC 199
Query: 193 LHHL--EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHAS--WVL 247
L L EG+ PV + +SP +L + D+T + ++D + G+ L T +GH + + L
Sbjct: 200 LRTLADEGN-PPVSFVKFSPNGKYILTATLDNT-LKLWDYSRGRCLKT-YTGHKNEKYCL 256
Query: 248 SVDASPDGAA-ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVS-- 304
S G + +GS D V +W+L + +Q + HTD V + P + S +
Sbjct: 257 FASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALE 316
Query: 305 DDKSISLY 312
+DK+I ++
Sbjct: 317 NDKTIKVW 324
Score = 196 (74.1 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 78/296 (26%), Positives = 133/296 (44%)
Query: 25 ATETRPALLLTGSLDETVKLWRPD--DMQLERTNTGHCLGVVSVAAHPSGIIAASASLDS 82
ATE PA L + P + L T GH + SV P+G AS++ D+
Sbjct: 2 ATEHLPAERAQSLLSAPRREEEPQKPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADA 61
Query: 83 FVRVFDV-DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL 141
+ ++ D N TL E+ + + + L V+ ++K+WD + + TL
Sbjct: 62 LIIIWGAYDGNCK-KTLYGHSLEISDVAWSSDSSRL-VSASDDKTLKVWDMRSGKCLKTL 119
Query: 142 SIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFM 201
K S FV ++P I GS D ++ +++V K L L H
Sbjct: 120 ------------KGHSD-FVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSD 166
Query: 202 PVRSLVYSPVDPRVLFSASDDTHVHMYDA-EGKSLVT-AMSGHASWVLSVDASPDGAAIT 259
P+ ++ ++ + ++ S S D ++DA G+ L T A G+ V V SP+G I
Sbjct: 167 PISAVNFN-CNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPP-VSFVKFSPNGKYIL 224
Query: 260 TGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGV--SFRPLGGR-VVSVSDDKSISLY 312
T + D T+KLWD + +++ T H ++ + + SF G + VVS S+D + ++
Sbjct: 225 TATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIW 280
Score = 181 (68.8 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 59/221 (26%), Positives = 106/221 (47%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
TL + + ++F P G LA + A + +W N TL L+ +D
Sbjct: 34 TLAGHSAAISSVKFSPNGEWLA-SSAADALIIIWGAYDGNCKKTLY---GHSLEISD--- 86
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVL 216
VAWS D R+ S D T+ V+D+ K L L+GH V ++P ++
Sbjct: 87 -------VAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPS-NLI 138
Query: 217 FSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMR 275
S S D V +++ + GK L T +S H+ + +V+ + +G+ I +GS D ++WD
Sbjct: 139 VSGSFDESVKIWEVKTGKCLKT-LSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASG 197
Query: 276 AAMQSMTNHTDQ-VWGVSFRPLGGRVVSVSDDKSISLYEYS 315
++++ + + V V F P G +++ + D ++ L++YS
Sbjct: 198 QCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYS 238
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 74/273 (27%), Positives = 118/273 (43%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
LLT S D V +W +L GH V S P G + AS+S D +R++DV +
Sbjct: 41 LLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARS 100
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ L+ V + F P LA +GG +W+ + + L + + ++ +
Sbjct: 101 KCLHVLKGHQRSVETVSFSPDSKQLA-SGGWDKRAIVWEVQSGRRVHLL-VGHCDSIQSS 158
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV---TRAKFLHHLEGHFMPVRSLVYS 209
D +SP +A GS D T+ ++D+ T H+LEGH + L YS
Sbjct: 159 D------------FSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYS 206
Query: 210 PVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKL 269
+L S S D + ++ +L + GH WV S+ SPD + + RTVK+
Sbjct: 207 ASG--LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKV 264
Query: 270 WDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVS 302
WD ++++ D F P G +VS
Sbjct: 265 WDCLTGKCLETLKGMLDVAHACIFTPDGKLLVS 297
Score = 214 (80.4 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 68/207 (32%), Positives = 100/207 (48%)
Query: 110 FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169
F P G TL A V +W T + L+ L+ R G P V S +SPD
Sbjct: 34 FSPDGRTLLTASDDGC-VYVWGTKSGRLLWRLAGHR--G--P---------VKSCCFSPD 79
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
GR IA S D +I ++DV R+K LH L+GH V ++ +SP D + L S D +++
Sbjct: 80 GRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSP-DSKQLASGGWDKRAIVWE 138
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN---HTD 286
+ V + GH + S D SP ++ TGS D TV +WDL + S N HT
Sbjct: 139 VQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTG 198
Query: 287 QVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ + + G + S S DK+I +++
Sbjct: 199 NISCLCYSA-SGLLASGSWDKTICVWK 224
Score = 198 (74.8 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 41/149 (27%), Positives = 73/149 (48%)
Query: 165 AWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTH 224
A+SPDGR + S DG + V+ + L L GH PV+S +SP D R++ S+S D
Sbjct: 33 AFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSP-DGRLIASSSSDHS 91
Query: 225 VHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNH 284
+ ++D + + GH V +V SPD + +G D+ +W++ + + H
Sbjct: 92 IRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGH 151
Query: 285 TDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
D + F P + + S D ++ +++
Sbjct: 152 CDSIQSSDFSPTSDSLATGSWDSTVHIWD 180
Score = 154 (59.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 38/115 (33%), Positives = 58/115 (50%)
Query: 199 HFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAI 258
H V +SP D R L +ASDD V+++ + L+ ++GH V S SPDG I
Sbjct: 25 HHGEVNCSAFSP-DGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLI 83
Query: 259 TTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ SSD +++LWD+ + + H V VSF P ++ S DK ++E
Sbjct: 84 ASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWE 138
Score = 147 (56.8 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 62/233 (26%), Positives = 97/233 (41%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
L+ + S D +++LW + GH V +V+ P AS D V++V +
Sbjct: 82 LIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQS 141
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ L + F P +LA G ++V +WD + +S EG
Sbjct: 142 GRRVHLLVGHCDSIQSSDFSPTSDSLAT-GSWDSTVHIWDLRASTPV--VSYHNLEG--H 196
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
T S + +S G +A GS D TI V+ T L+GH + V SL +SP
Sbjct: 197 TGNISC------LCYSASGL-LASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSP- 248
Query: 212 DPRVLFSASDDTHVHMYDA-EGKSLVTAMSGHASWVLSVDASPDGAAITTGSS 263
D L SA V ++D GK L T + G + +PDG + +G++
Sbjct: 249 DELKLASAGYSRTVKVWDCLTGKCLET-LKGMLDVAHACIFTPDGKLLVSGAA 300
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 233 (87.1 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 65/241 (26%), Positives = 112/241 (46%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LLLTG D V LW + GH V SVA + ++ + + ++++D++
Sbjct: 30 LLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEE 89
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ + S ++F P G LA +G ++++WDT R +G
Sbjct: 90 SKMVRAFTGHRSNCSAVEFHPFGEFLA-SGSSDTNLRVWDT------------RKKGCIQ 136
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
T K ++ + ++ +SPDGR + G +D + V+D+T K LH + H P+RSL + P+
Sbjct: 137 TYKGHTRG-ISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPL 195
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRT-VKLW 270
+ +L + S D V +D E L+ A+ V ++ PDG + G D V W
Sbjct: 196 E-FLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDGLKVYSW 254
Query: 271 D 271
+
Sbjct: 255 E 255
Score = 182 (69.1 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 37/151 (24%), Positives = 72/151 (47%)
Query: 163 SVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
SVA++ + + G+ G I ++D+ +K + GH ++ + P L S S D
Sbjct: 63 SVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG-EFLASGSSD 121
Query: 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMT 282
T++ ++D K + GH + +++ SPDG + +G D VK+WDL +
Sbjct: 122 TNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFK 181
Query: 283 NHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
H + + F PL + + S D+++ ++
Sbjct: 182 CHEGPIRSLDFHPLEFLLATGSADRTVKFWD 212
Score = 165 (63.1 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 39/143 (27%), Positives = 71/143 (49%)
Query: 171 RRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA 230
R + G D ++++ + + L GH PV S+ ++ + VL AS + ++D
Sbjct: 29 RLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGV-IKLWDL 87
Query: 231 EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWG 290
E +V A +GH S +V+ P G + +GSSD +++WD + +Q+ HT +
Sbjct: 88 EESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGIST 147
Query: 291 VSFRPLGGRVVSVSDDKSISLYE 313
+ F P G VVS D + +++
Sbjct: 148 IEFSPDGRWVVSGGLDNVVKVWD 170
Score = 165 (63.1 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 54/198 (27%), Positives = 87/198 (43%)
Query: 25 ATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFV 84
A + L+L G+ +KLW ++ ++ R TGH +V HP G AS S D+ +
Sbjct: 65 AFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNL 124
Query: 85 RVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIP 144
RV+D I T + + ++F P G + V+GG VK+WD L+
Sbjct: 125 RVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWV-VSGGLDNVVKVWDLTAGKLLHEFKCH 183
Query: 145 RPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVR 204
EG P + S+ + P +A GS D T+ +D+ + + VR
Sbjct: 184 --EG--P---------IRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVR 230
Query: 205 SLVYSPVDPRVLFSASDD 222
++ + P D + LF DD
Sbjct: 231 AIAFHP-DGQTLFCGLDD 247
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 31/121 (25%), Positives = 53/121 (43%)
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS 252
L H V L R+L + DD V+++ + ++ GH S V SV +
Sbjct: 8 LQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFN 67
Query: 253 PDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+ + G+S +KLWDL +++ T H V F P G + S S D ++ ++
Sbjct: 68 SEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVW 127
Query: 313 E 313
+
Sbjct: 128 D 128
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 228 (85.3 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 83/312 (26%), Positives = 132/312 (42%)
Query: 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRP-DDMQLERTNTGHCLGVVSVAAH 69
+ HE V+ + P T L + D + LW D T GH V+ + +
Sbjct: 63 SGHEGEVYCCKFHPNGST----LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 118
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
G + SAS D V V+D +T + L+ S V +G L G +VKL
Sbjct: 119 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 178
Query: 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
WD R + T +++ + VL+V ++ +I G +D I V+D+ +
Sbjct: 179 WDI------------RKKAAIQTFQNTYQ--VLAVTFNDTSDQIISGGIDNDIKVWDLRQ 224
Query: 190 AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD----AEGKSLVTAMSGHA-- 243
K + + GH V L S +L +A D+T V ++D A + V G+
Sbjct: 225 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNT-VRVWDVRPFAPKERCVKIFQGNVHN 283
Query: 244 --SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301
+L SPDG+ I GS+DR V +WD R + + H + V+F P ++
Sbjct: 284 FEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIII 343
Query: 302 SVSDDKSISLYE 313
S S DK + + E
Sbjct: 344 SASSDKRLYMGE 355
Score = 184 (69.8 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 59/222 (26%), Positives = 101/222 (45%)
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT-ATWNLIATLSIPRPEGLKP 151
A I L EV+ +F P G+TLA AG + LW+ + ATL
Sbjct: 57 APIMLLSGHEGEVYCCKFHPNGSTLASAGFDRL-ILLWNVYGDCDNYATL---------- 105
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
K S V+ + ++ DG + S D T++V+D + + L+GH V S +
Sbjct: 106 --KGHSGA-VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 162
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
P+++ + SDD V ++D K+ + + VL+V + I +G D +K+WD
Sbjct: 163 GPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWD 221
Query: 272 LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
L +M H D V G+S G ++S + D ++ +++
Sbjct: 222 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 263
Score = 141 (54.7 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 58/254 (22%), Positives = 116/254 (45%)
Query: 28 TRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV-AAHPSGIIAASASLDSFVRV 86
T ++L + S D+TV +W + + + GH V S A + + S D V++
Sbjct: 119 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 178
Query: 87 FDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRP 146
+D+ A+I T + + +V + F+ + ++GG +K+WD L T+
Sbjct: 179 WDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQI-ISGGIDNDIKVWDLRQNKLTYTM----- 231
Query: 147 EGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT----RAKFLHHLEGHFMP 202
G D V ++ S +G + +MD T+ V+DV + + + +G+
Sbjct: 232 RG--HADS------VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 283
Query: 203 V-RSLV---YSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAI 258
++L+ +SP D + + S D V+++D + ++ + GHA + V PD I
Sbjct: 284 FEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 342
Query: 259 TTGSSDRTVKLWDL 272
+ SSD+ + + ++
Sbjct: 343 ISASSDKRLYMGEI 356
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 228 (85.3 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 83/312 (26%), Positives = 132/312 (42%)
Query: 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRP-DDMQLERTNTGHCLGVVSVAAH 69
+ HE V+ + P T L + D + LW D T GH V+ + +
Sbjct: 64 SGHEGEVYCCKFHPNGST----LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
G + SAS D V V+D +T + L+ S V +G L G +VKL
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
WD R + T +++ + VL+V ++ +I G +D I V+D+ +
Sbjct: 180 WDI------------RKKAAVQTFQNTYQ--VLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 190 AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD----AEGKSLVTAMSGHA-- 243
K + + GH V L S +L +A D+T V ++D A + V G+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNT-VRVWDVRPFAPKERCVKIFQGNVHN 284
Query: 244 --SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301
+L SPDG+ I GS+DR V +WD R + + H + V+F P ++
Sbjct: 285 FEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIIL 344
Query: 302 SVSDDKSISLYE 313
S S DK + + E
Sbjct: 345 SASSDKRLYMGE 356
Score = 185 (70.2 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 60/222 (27%), Positives = 101/222 (45%)
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT-ATWNLIATLSIPRPEGLKP 151
A I L EV+ +F P G+TLA AG + LW+ + ATL
Sbjct: 58 APIMLLSGHEGEVYCCKFHPNGSTLASAGFDRL-ILLWNVYGDCDNYATL---------- 106
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
K S V+ + ++ DG + S D T++V+D + + L+GH V S +
Sbjct: 107 --KGHSGA-VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 163
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
P+++ + SDD V ++D K+ V + VL+V + I +G D +K+WD
Sbjct: 164 GPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWD 222
Query: 272 LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
L +M H D V G+S G ++S + D ++ +++
Sbjct: 223 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264
Score = 139 (54.0 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 57/254 (22%), Positives = 116/254 (45%)
Query: 28 TRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV-AAHPSGIIAASASLDSFVRV 86
T ++L + S D+TV +W + + + GH V S A + + S D V++
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 87 FDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRP 146
+D+ A++ T + + +V + F+ + ++GG +K+WD L T+
Sbjct: 180 WDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQI-ISGGIDNDIKVWDLRQNKLTYTM----- 232
Query: 147 EGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT----RAKFLHHLEGHFMP 202
G D V ++ S +G + +MD T+ V+DV + + + +G+
Sbjct: 233 RG--HADS------VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 284
Query: 203 V-RSLV---YSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAI 258
++L+ +SP D + + S D V+++D + ++ + GHA + V PD I
Sbjct: 285 FEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPII 343
Query: 259 TTGSSDRTVKLWDL 272
+ SSD+ + + ++
Sbjct: 344 LSASSDKRLYMGEI 357
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 226 (84.6 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 77/289 (26%), Positives = 128/289 (44%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL + S+D+T+ LW + L GH G+ +A SAS D +R++D +
Sbjct: 57 LLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARS 116
Query: 92 NAS-IATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
+ L + V+ + F+P + L V+G ++++W+ T + +
Sbjct: 117 PYECLKVLRGHTNFVFCVNFNPP-SNLIVSGSFDETIRIWEVKTGKCVRMI--------- 166
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLV-YS 209
K+ S + SV ++ DG I S DG+ ++D L L P S +S
Sbjct: 167 ---KAHSMP-ISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFS 222
Query: 210 PVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS---PDGAAITTGSSDRT 266
P +L + D T A GK L +GH + V + ++ +G I +GS D
Sbjct: 223 PNGKFILVATLDSTLKLSNYATGKFL-KVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNC 281
Query: 267 VKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSD--DKSISLYE 313
V LWDL R +Q + HTD V VS P+ + S + DK+I +++
Sbjct: 282 VYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIWK 330
Score = 185 (70.2 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 66/264 (25%), Positives = 121/264 (45%)
Query: 54 RTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPK 113
+T GH + V G + ASAS+D + ++ + I E S + + +
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWS-S 95
Query: 114 GTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI 173
+ + ++++WD + P E LK ++ FV V ++P I
Sbjct: 96 DSHYTCSASDDCTLRIWDARS---------PY-ECLKVLRGHTN--FVFCVNFNPPSNLI 143
Query: 174 ACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA-EG 232
GS D TI +++V K + ++ H MP+ S+ ++ D ++ SAS D ++DA EG
Sbjct: 144 VSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNR-DGSLIVSASHDGSCKIWDAKEG 202
Query: 233 KSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVS 292
L T + + V SP+G I + D T+KL + ++ T HT++V+ ++
Sbjct: 203 TCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCIT 262
Query: 293 --FRPLGGR-VVSVSDDKSISLYE 313
F G+ +VS S+D + L++
Sbjct: 263 SAFSVTNGKYIVSGSEDNCVYLWD 286
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 227 (85.0 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 86/312 (27%), Positives = 133/312 (42%)
Query: 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRP-DDMQLERTNTGHCLGVVSVAAH 69
+ HE V+ + P A L + D + +W D + T GH V+ + +
Sbjct: 53 SGHEGEVYCCKFHP----NGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYN 108
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
G + SAS D V V+D +T + L+ S V +G LA G +VKL
Sbjct: 109 TDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKL 168
Query: 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
WD R + T +++ + VLSV ++ +I G +D I V+D+ +
Sbjct: 169 WDI------------RKKASVHTFQNTYQ--VLSVTFNDTSDQIISGGIDNDIKVWDLRQ 214
Query: 190 AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD----AEGKSLVTAMSGHA-- 243
K ++ ++GH V L S D L S S D V ++D A + V G+
Sbjct: 215 NKLIYSMQGHGDSVTGLSLS-ADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHN 273
Query: 244 --SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301
+L S DG+ I GS+DR V +WD R + + H V V+F P V+
Sbjct: 274 FEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVL 333
Query: 302 SVSDDKSISLYE 313
S S DK + + E
Sbjct: 334 SGSSDKRLYIGE 345
Score = 184 (69.8 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 62/222 (27%), Positives = 98/222 (44%)
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT-ATWNLIATLSIPRPEGLKP 151
A I L EV+ +F P G TLA + G + +W+ ATL
Sbjct: 47 APIMLLSGHEGEVYCCKFHPNGATLA-SSGYDRLILMWNVYGDCENYATL---------- 95
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
K S V+ + ++ DG + S D T+ V+D + + L+GH V S +
Sbjct: 96 --KGHSGA-VMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARR 152
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
P++ + SDD V ++D K+ V + VLSV + I +G D +K+WD
Sbjct: 153 GPQLACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWD 211
Query: 272 LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
L + SM H D V G+S G ++S S D S+ +++
Sbjct: 212 LRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWD 253
Score = 151 (58.2 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 61/253 (24%), Positives = 115/253 (45%)
Query: 28 TRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV-AAHPSGIIAASASLDSFVRV 86
T +LL + S D+TV +W + + + GH V S A +A + S D V++
Sbjct: 109 TDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKL 168
Query: 87 FDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRP 146
+D+ AS+ T + + +V + F+ + ++GG +K+WD LI ++
Sbjct: 169 WDIRKKASVHTFQ-NTYQVLSVTFNDTSDQI-ISGGIDNDIKVWDLRQNKLIYSM----- 221
Query: 147 EGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT----RAKFLHHLEG--HF 200
+G S V ++ S DG + SMD ++ V+D+ + + + +G H
Sbjct: 222 QG-----HGDS---VTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHN 273
Query: 201 MPVRSLVYS-PVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAIT 259
L S D + + S D V+++D + +V + GHA V V P+ +
Sbjct: 274 FEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVL 333
Query: 260 TGSSDRTVKLWDL 272
+GSSD+ + + ++
Sbjct: 334 SGSSDKRLYIGEI 346
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 228 (85.3 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 73/304 (24%), Positives = 138/304 (45%)
Query: 13 HEESVWAVTWVPATETRPAL--LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHP 70
H + + ++W P P + + S D +V++W + ER TGH V +
Sbjct: 149 HSKWITGLSWEPL-HANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGG 207
Query: 71 SGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLW 130
G++ SAS D ++V+ TL+ W T+A++ + +
Sbjct: 208 DGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGH--WV-------NTMALSTDYALRTGAF 257
Query: 131 DTATWNLIATLSIPRPEG-LKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
+ A A+++ +G L+ + +++ L P+ R+ GS D T+ ++
Sbjct: 258 EPAE----ASINAQDLQGSLQELKDRALRRYNLVRGQGPE--RLVSGSDDFTLFMWSPAE 311
Query: 190 AKF-LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248
K L + GH + +++SP D R++ SAS D + ++D + ++ GH + V
Sbjct: 312 DKKPLARMTGHQALINQVLFSP-DSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQ 370
Query: 249 VDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKS 308
+ S D + +GSSD T+K+WD+ + + H D+V+ V + P G RV S DK
Sbjct: 371 IAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKC 430
Query: 309 ISLY 312
+ ++
Sbjct: 431 LRIW 434
Score = 206 (77.6 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 71/264 (26%), Positives = 125/264 (47%)
Query: 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
GH V+SVA P+G AS S D+ VR +D+ T T + V + + P G TL
Sbjct: 63 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTL 122
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW-----SPDGRR 172
A +G + + LWD +T + + + K++ ++W +P+ R
Sbjct: 123 A-SGCKNGQILLWDPSTGKQVGRVL------------AGHSKWITGLSWEPLHANPECRY 169
Query: 173 IACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG 232
+A S DG++ V+D T + L GH V L + +L+SAS D + ++ A
Sbjct: 170 MASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG--GDGLLYSASQDRTIKVWRAHD 227
Query: 233 KSLVTAMSGHASWVLSVDASPDGAAITTGS---SDRTVKLWDLNMRAAMQSMTNHTDQVW 289
L + GH WV ++ S D A+ TG+ ++ ++ DL + ++Q + + + +
Sbjct: 228 GVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEASINAQDL--QGSLQELKDRALRRY 284
Query: 290 GVSFRPLGG-RVVSVSDDKSISLY 312
+ R G R+VS SDD ++ ++
Sbjct: 285 NL-VRGQGPERLVSGSDDFTLFMW 307
Score = 177 (67.4 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 54/194 (27%), Positives = 92/194 (47%)
Query: 96 ATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKS 155
++LE V + F P G LA +G G +V+ WD +T T +G
Sbjct: 59 SSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDLSTETPHFTC-----QG------- 105
Query: 156 SSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHH-LEGHFMPVRSLVYSPV--D 212
+ +VLS++WSPDG+ +A G +G I ++D + K + L GH + L + P+ +
Sbjct: 106 -HRHWVLSISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHAN 164
Query: 213 P--RVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
P R + S+S D V ++D ++GH V + DG + + S DRT+K+W
Sbjct: 165 PECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 223
Query: 271 DLNMRAAMQSMTNH 284
+ +++ H
Sbjct: 224 RAHDGVLCRTLQGH 237
Score = 175 (66.7 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 76/309 (24%), Positives = 128/309 (41%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD-MQLERTNTGHCLGVVSVA---- 67
H V +++W P +T L +G + + LW P Q+ R GH + ++
Sbjct: 106 HRHWVLSISWSPDGKT----LASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPL 161
Query: 68 -AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
A+P AS+S D VRV+D L V +++ G L + +
Sbjct: 162 HANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQDRT 219
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSV-AWSPDGRRIACGSMDGTISVF 185
+K+W L TL + G + S + L A+ P I + G++
Sbjct: 220 IKVWRAHDGVLCRTL---QGHGHWVNTMALSTDYALRTGAFEPAEASINAQDLQGSLQEL 276
Query: 186 DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHAS 244
RA ++L VR P L S SDD + M+ AE K + M+GH +
Sbjct: 277 K-DRALRRYNL------VRGQ-----GPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQA 324
Query: 245 WVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVS 304
+ V SPD I + S D+++KLWD + S+ H V+ +++ +VS S
Sbjct: 325 LINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGS 384
Query: 305 DDKSISLYE 313
D ++ +++
Sbjct: 385 SDSTLKVWD 393
Score = 153 (58.9 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 38/124 (30%), Positives = 62/124 (50%)
Query: 196 LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDG 255
LEGH V S+ +SP + L S S DT V +D ++ GH WVLS+ SPDG
Sbjct: 61 LEGHSEAVISVAFSPTG-KYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 119
Query: 256 AAITTGSSDRTVKLWDLNM-RAAMQSMTNHTDQVWGVSFRPLGGR-----VVSVSDDKSI 309
+ +G + + LWD + + + + H+ + G+S+ PL + S S D S+
Sbjct: 120 KTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSV 179
Query: 310 SLYE 313
+++
Sbjct: 180 RVWD 183
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 226 (84.6 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 83/312 (26%), Positives = 132/312 (42%)
Query: 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRP-DDMQLERTNTGHCLGVVSVAAH 69
+ HE V+ + P T L + D + LW D T GH V+ + +
Sbjct: 64 SGHEGEVYCCKFHPNGST----LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
G + SAS D V V+D +T + L+ S V +G L G +VKL
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
WD R + T +++ + VL+V ++ +I G +D I V+D+ +
Sbjct: 180 WDI------------RKKAAIQTFQNTYQ--VLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 190 AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD----AEGKSLVTAMSGHA-- 243
K + + GH V L S +L +A D+T V ++D A + V G+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNT-VRVWDVRPFAPKERCVRIFQGNVHN 284
Query: 244 --SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301
+L SPDG+ I GS+DR V +WD R + + H + V+F P ++
Sbjct: 285 FEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIL 344
Query: 302 SVSDDKSISLYE 313
S S DK + + E
Sbjct: 345 SASSDKRLYMGE 356
Score = 184 (69.8 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 59/222 (26%), Positives = 101/222 (45%)
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT-ATWNLIATLSIPRPEGLKP 151
A I L EV+ +F P G+TLA AG + LW+ + ATL
Sbjct: 58 APIMLLSGHEGEVYCCKFHPNGSTLASAGFDRL-ILLWNVYGDCDNYATL---------- 106
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
K S V+ + ++ DG + S D T++V+D + + L+GH V S +
Sbjct: 107 --KGHSGA-VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 163
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
P+++ + SDD V ++D K+ + + VL+V + I +G D +K+WD
Sbjct: 164 GPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWD 222
Query: 272 LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
L +M H D V G+S G ++S + D ++ +++
Sbjct: 223 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264
Score = 142 (55.0 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 58/254 (22%), Positives = 116/254 (45%)
Query: 28 TRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV-AAHPSGIIAASASLDSFVRV 86
T ++L + S D+TV +W + + + GH V S A + + S D V++
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 87 FDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRP 146
+D+ A+I T + + +V + F+ + ++GG +K+WD L T+
Sbjct: 180 WDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQI-ISGGIDNDIKVWDLRQNKLTYTM----- 232
Query: 147 EGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT----RAKFLHHLEGHFMP 202
G D V ++ S +G + +MD T+ V+DV + + + +G+
Sbjct: 233 RG--HADS------VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHN 284
Query: 203 V-RSLV---YSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAI 258
++L+ +SP D + + S D V+++D + ++ + GHA + V PD I
Sbjct: 285 FEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 343
Query: 259 TTGSSDRTVKLWDL 272
+ SSD+ + + ++
Sbjct: 344 LSASSDKRLYMGEI 357
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 226 (84.6 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 83/312 (26%), Positives = 132/312 (42%)
Query: 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRP-DDMQLERTNTGHCLGVVSVAAH 69
+ HE V+ + P T L + D + LW D T GH V+ + +
Sbjct: 64 SGHEGEVYCCKFHPNGST----LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
G + SAS D V V+D +T + L+ S V +G L G +VKL
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
WD R + T +++ + VL+V ++ +I G +D I V+D+ +
Sbjct: 180 WDI------------RKKAAIQTFQNTYQ--VLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 190 AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD----AEGKSLVTAMSGHA-- 243
K + + GH V L S +L +A D+T V ++D A + V G+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNT-VRVWDVRPFAPKERCVKIFQGNVHN 284
Query: 244 --SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301
+L SPDG+ I GS+DR V +WD R + + H + V+F P ++
Sbjct: 285 FEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIL 344
Query: 302 SVSDDKSISLYE 313
S S DK + + E
Sbjct: 345 SASSDKRLYMGE 356
Score = 184 (69.8 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 59/222 (26%), Positives = 101/222 (45%)
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT-ATWNLIATLSIPRPEGLKP 151
A I L EV+ +F P G+TLA AG + LW+ + ATL
Sbjct: 58 APIMLLSGHEGEVYCCKFHPNGSTLASAGFDRL-ILLWNVYGDCDNYATL---------- 106
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
K S V+ + ++ DG + S D T++V+D + + L+GH V S +
Sbjct: 107 --KGHSGA-VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 163
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
P+++ + SDD V ++D K+ + + VL+V + I +G D +K+WD
Sbjct: 164 GPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWD 222
Query: 272 LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
L +M H D V G+S G ++S + D ++ +++
Sbjct: 223 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264
Score = 141 (54.7 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 58/254 (22%), Positives = 116/254 (45%)
Query: 28 TRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV-AAHPSGIIAASASLDSFVRV 86
T ++L + S D+TV +W + + + GH V S A + + S D V++
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 87 FDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRP 146
+D+ A+I T + + +V + F+ + ++GG +K+WD L T+
Sbjct: 180 WDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQI-ISGGIDNDIKVWDLRQNKLTYTM----- 232
Query: 147 EGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT----RAKFLHHLEGHFMP 202
G D V ++ S +G + +MD T+ V+DV + + + +G+
Sbjct: 233 RG--HADS------VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 284
Query: 203 V-RSLV---YSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAI 258
++L+ +SP D + + S D V+++D + ++ + GHA + V PD I
Sbjct: 285 FEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 343
Query: 259 TTGSSDRTVKLWDL 272
+ SSD+ + + ++
Sbjct: 344 LSASSDKRLYMGEI 357
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 226 (84.6 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 83/312 (26%), Positives = 132/312 (42%)
Query: 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRP-DDMQLERTNTGHCLGVVSVAAH 69
+ HE V+ + P T L + D + LW D T GH V+ + +
Sbjct: 64 SGHEGEVYCCKFHPNGST----LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
G + SAS D V V+D +T + L+ S V +G L G +VKL
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
WD R + T +++ + VL+V ++ +I G +D I V+D+ +
Sbjct: 180 WDI------------RKKAAIQTFQNTYQ--VLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 190 AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD----AEGKSLVTAMSGHA-- 243
K + + GH V L S +L +A D+T V ++D A + V G+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNT-VRVWDVRPFAPKERCVKIFQGNVHN 284
Query: 244 --SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301
+L SPDG+ I GS+DR V +WD R + + H + V+F P ++
Sbjct: 285 FEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIL 344
Query: 302 SVSDDKSISLYE 313
S S DK + + E
Sbjct: 345 SASSDKRLYMGE 356
Score = 184 (69.8 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 59/222 (26%), Positives = 101/222 (45%)
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT-ATWNLIATLSIPRPEGLKP 151
A I L EV+ +F P G+TLA AG + LW+ + ATL
Sbjct: 58 APIMLLSGHEGEVYCCKFHPNGSTLASAGFDRL-ILLWNVYGDCDNYATL---------- 106
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
K S V+ + ++ DG + S D T++V+D + + L+GH V S +
Sbjct: 107 --KGHSGA-VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 163
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
P+++ + SDD V ++D K+ + + VL+V + I +G D +K+WD
Sbjct: 164 GPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWD 222
Query: 272 LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
L +M H D V G+S G ++S + D ++ +++
Sbjct: 223 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264
Score = 141 (54.7 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 58/254 (22%), Positives = 116/254 (45%)
Query: 28 TRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV-AAHPSGIIAASASLDSFVRV 86
T ++L + S D+TV +W + + + GH V S A + + S D V++
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 87 FDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRP 146
+D+ A+I T + + +V + F+ + ++GG +K+WD L T+
Sbjct: 180 WDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQI-ISGGIDNDIKVWDLRQNKLTYTM----- 232
Query: 147 EGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT----RAKFLHHLEGHFMP 202
G D V ++ S +G + +MD T+ V+DV + + + +G+
Sbjct: 233 RG--HADS------VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 284
Query: 203 V-RSLV---YSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAI 258
++L+ +SP D + + S D V+++D + ++ + GHA + V PD I
Sbjct: 285 FEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 343
Query: 259 TTGSSDRTVKLWDL 272
+ SSD+ + + ++
Sbjct: 344 LSASSDKRLYMGEI 357
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 227 (85.0 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 73/249 (29%), Positives = 114/249 (45%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL + S D T+KLW + RT GH V SVA P+G SAS D +++++V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVAT 223
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPR------ 145
+ T V ++ + GT +A + +V++W AT A L
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIA-SSSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 146 ---PEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMP 202
PE PT ++ + P G + GS D TI ++DV+ L L GH
Sbjct: 283 SWAPESAHPTILEATGSETKK-SGKP-GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNW 340
Query: 203 VRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGS 262
VR ++ P + + S +DD + ++D + K +S H +V S+D + TGS
Sbjct: 341 VRGVLVHP-GGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGS 399
Query: 263 SDRTVKLWD 271
D+TVK+W+
Sbjct: 400 VDQTVKVWE 408
Score = 220 (82.5 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 80/292 (27%), Positives = 129/292 (44%)
Query: 43 KLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASP 102
K W P + + +GH V V HP + SAS D+ ++V+D +T TL+
Sbjct: 92 KEWIPRPPE-KYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHT 150
Query: 103 SEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVL 162
V + FD G LA ++KLWD + I T+ G D + S
Sbjct: 151 DSVQDISFDHTGKLLASCSA-DMTIKLWDFQGFECIRTM-----HG---HDHNVS----- 196
Query: 163 SVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
SVA P+G I S D TI +++V + GH VR +V D ++ S+S+D
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVR-MVRPNQDGTLIASSSND 255
Query: 223 THVHMYDAEGKSLVTAMSGHA------SW--------VLSVDASPD------GAAITTGS 262
V ++ K + H SW +L S G + +GS
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGS 315
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
D+T+K+WD+++ + ++ H + V GV P G +VS +DDK++ +++Y
Sbjct: 316 RDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDY 367
Score = 128 (50.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 29/99 (29%), Positives = 52/99 (52%)
Query: 216 LFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
L S S D + M+D G L+T + GH +WV V P G I + + D+T+++WD
Sbjct: 311 LLSGSRDKTIKMWDVSIGMCLMTLV-GHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKN 369
Query: 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ ++++ H V + F VV+ S D+++ ++E
Sbjct: 370 KRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 36/123 (29%), Positives = 51/123 (41%)
Query: 10 ENAHEESVWAVTWVPATETRPA-LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAA 68
E+AH + A +P LL+GS D+T+K+W T GH V V
Sbjct: 287 ESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLV 346
Query: 69 HPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVK 128
HP G S + D +R++D TL A V + F K V G +VK
Sbjct: 347 HPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFH-KTAPYVVTGSVDQTVK 405
Query: 129 LWD 131
+W+
Sbjct: 406 VWE 408
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 229 (85.7 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 73/258 (28%), Positives = 117/258 (45%)
Query: 61 LGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVA 120
L V ++A P G + + D ++++D+ T +++ + F G + V+
Sbjct: 361 LYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFI-VS 419
Query: 121 GGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG 180
G G + +LWD T I L I G V ++A SP+ + IA GS+D
Sbjct: 420 GSGDRTARLWDVETGQCILKLEIEN--G------------VTAIAISPNDQFIAVGSLDQ 465
Query: 181 TISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAE-----GKSL 235
I V+ V+ + LEGH V S+ +SP D +L S S D + +++ + G S
Sbjct: 466 IIRVWSVS-GTLVERLEGHKESVYSIAFSP-DSSILLSGSLDKTIKVWELQATRSVGLSA 523
Query: 236 V-------TAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQV 288
+ +GH +VLSV SPD +GS DR+++ WDL + + H + V
Sbjct: 524 IKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSV 583
Query: 289 WGVSFRPLGGRVVSVSDD 306
V F P G + S S D
Sbjct: 584 ISVCFSPDGRQFASGSGD 601
Score = 214 (80.4 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 76/254 (29%), Positives = 120/254 (47%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L+TG+ D +KLW ++ +GH + S+ +G S S D R++DV+T
Sbjct: 375 LVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETG 434
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
I LE + V + P +AV G +++W + TL + R EG
Sbjct: 435 QCILKLEIE-NGVTAIAISPNDQFIAV-GSLDQIIRVWSVS-----GTL-VERLEG---- 482
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV--TRAKFLHHLE----------GHF 200
K+ V S+A+SPD + GS+D TI V+++ TR+ L ++ GH
Sbjct: 483 ----HKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHT 538
Query: 201 MPVRSLVYSPVDPRVLFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAIT 259
V S+ SP D R S S D + +D + G+S +T GH + V+SV SPDG
Sbjct: 539 DFVLSVAVSP-DSRWGLSGSKDRSMQFWDLQTGQSYLTCQ-GHKNSVISVCFSPDGRQFA 596
Query: 260 TGSSDRTVKLWDLN 273
+GS D ++W ++
Sbjct: 597 SGSGDLRARIWSID 610
Score = 203 (76.5 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 62/229 (27%), Positives = 115/229 (50%)
Query: 85 RVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIP 144
RVF+++ + TLE PS V ++F G LA +A+V +D T + TL
Sbjct: 300 RVFNINL---VHTLE-HPSVVCCVKFSNNGKYLATGCNQAANV--FDVQTGKKLFTLHEE 353
Query: 145 RPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVR 204
P+ P S +V ++A+SPDG+ + G+ D I ++D++ K + GH +
Sbjct: 354 SPD---P----SRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIY 406
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
SL +S + R + S S D ++D E + + + V ++ SP+ I GS D
Sbjct: 407 SLDFSH-NGRFIVSGSGDRTARLWDVETGQCILKLEIE-NGVTAIAISPNDQFIAVGSLD 464
Query: 265 RTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ +++W ++ ++ + H + V+ ++F P ++S S DK+I ++E
Sbjct: 465 QIIRVWSVS-GTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWE 512
Score = 181 (68.8 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 69/246 (28%), Positives = 110/246 (44%)
Query: 86 VFDVDTNASIATL-EASPSE-----VWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIA 139
VFDV T + TL E SP V + F P G L V G +KLWD +T +
Sbjct: 338 VFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDGKYL-VTGTEDRQIKLWDLSTQKVRY 396
Query: 140 TLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGH 199
S ++ + S+ +S +GR I GS D T ++DV + + LE
Sbjct: 397 VFS-------------GHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIE 443
Query: 200 FMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAIT 259
V ++ SP D + + D + ++ G +LV + GH V S+ SPD + +
Sbjct: 444 -NGVTAIAISPNDQFIAVGSLDQI-IRVWSVSG-TLVERLEGHKESVYSIAFSPDSSILL 500
Query: 260 TGSSDRTVKLWDLNMRAAM------------QSMTNHTDQVWGVSFRPLGGRVVSVSDDK 307
+GS D+T+K+W+L ++ + T HTD V V+ P +S S D+
Sbjct: 501 SGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDR 560
Query: 308 SISLYE 313
S+ ++
Sbjct: 561 SMQFWD 566
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 39/131 (29%), Positives = 66/131 (50%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLW-------------RPDDMQLERTNTGH 59
H+ESV+++ + P + ++LL+GSLD+T+K+W +P+ + + T TGH
Sbjct: 483 HKESVYSIAFSPDS----SILLSGSLDKTIKVWELQATRSVGLSAIKPEGI-CKATYTGH 537
Query: 60 CLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAV 119
V+SVA P S S D ++ +D+ T S T + + V + F P G A
Sbjct: 538 TDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFA- 596
Query: 120 AGGGSASVKLW 130
+G G ++W
Sbjct: 597 SGSGDLRARIW 607
Score = 126 (49.4 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 40/158 (25%), Positives = 65/158 (41%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+ GSLD+ +++W +ER GH V S+A P I S SLD ++V+++
Sbjct: 458 IAVGSLDQIIRVWSVSGTLVERLE-GHKESVYSIAFSPDSSILLSGSLDKTIKVWELQAT 516
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
S+ P + + + G T V + W + + G
Sbjct: 517 RSVGLSAIKPEGICKATYT--GHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYL 574
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRA 190
K V+SV +SPDGR+ A GS D ++ + A
Sbjct: 575 TCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSIDPA 612
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 227 (85.0 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 70/234 (29%), Positives = 105/234 (44%)
Query: 37 SLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIA 96
S D TV LW H V VA HP+G A+A DS R++D+ T +
Sbjct: 273 SYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKELL 332
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
E V + F P G+ +A+ GG ++WD T I L +G
Sbjct: 333 YQEGHSKSVADVAFHPDGS-VALTGGHDCYGRVWDMRTGRCIMFL-----DG-------- 378
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVL 216
K + SV W P+G + GS D ++ V+D+ + + + H V + V + + L
Sbjct: 379 HTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTSVV-TRVRADAAGQYL 437
Query: 217 FSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
SAS D + M+ G + + GH + +L VD SPDG + + + DRT KLW
Sbjct: 438 VSASFDCTLKMWSTTGWQPLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLW 491
Score = 205 (77.2 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 48/152 (31%), Positives = 76/152 (50%)
Query: 161 VLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSAS 220
V VA+ P+G +A D T ++D+T K L + EGH V + + P D V +
Sbjct: 299 VSKVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHP-DGSVALTGG 357
Query: 221 DDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS 280
D + ++D + + GH + SV+ P+G + TGSSD ++K+WDL MR +
Sbjct: 358 HDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNTYT 417
Query: 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
M HT V V G +VS S D ++ ++
Sbjct: 418 MPAHTSVVTRVRADAAGQYLVSASFDCTLKMW 449
Score = 159 (61.0 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 37/141 (26%), Positives = 69/141 (48%)
Query: 173 IACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG 232
++C S DGT+ ++ +++ + LE H V + + P + L +A D+ MYD
Sbjct: 270 VSC-SYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHP-NGHHLATACFDSTWRMYDLTT 327
Query: 233 KSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVS 292
K + GH+ V V PDG+ TG D ++WD+ + + HT ++ V
Sbjct: 328 KKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVE 387
Query: 293 FRPLGGRVVSVSDDKSISLYE 313
+ P G +++ S D S+ +++
Sbjct: 388 WMPNGYEMITGSSDNSMKVWD 408
Score = 143 (55.4 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 52/194 (26%), Positives = 80/194 (41%)
Query: 33 LLTGSLDETVKLWRPDDMQLERT---NTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDV 89
L T D T WR D+ ++ GH V VA HP G +A + D + RV+D+
Sbjct: 311 LATACFDST---WRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDM 367
Query: 90 DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGL 149
T I L+ E+ +++ P G + + G S+K+WD L + R
Sbjct: 368 RTGRCIMFLDGHTKEIHSVEWMPNGYEM-ITGSSDNSMKVWD---------LRMRRNTYT 417
Query: 150 KPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS 209
P S V V G+ + S D T+ ++ T + L L+GH + + S
Sbjct: 418 MPAHTS----VVTRVRADAAGQYLVSASFDCTLKMWSTTGWQPLRQLQGHDTRILCVDIS 473
Query: 210 PVDPRVLFSASDDT 223
P + SA D T
Sbjct: 474 PDGQWMCSSAFDRT 487
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 228 (85.3 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 72/255 (28%), Positives = 114/255 (44%)
Query: 59 HCLGVVS-VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
H V S V SG + A+ D V ++ ++ I +L S V ++ + L
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTP-EEL 77
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS 177
VAG S S+++WD ++ TL K + S+ + P G +A GS
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLM-------------GHKANICSLDFHPYGEFVASGS 124
Query: 178 MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT 237
D I ++D+ R + GH VR L +SP D + L SA+DD V ++D +++
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 238 AMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLG 297
GH V V+ P+ + +GSSDRT++ WDL + + V V F P G
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDG 243
Query: 298 GRVVSVSDDKSISLY 312
+ S D S+ +Y
Sbjct: 244 CCLYSGCQD-SLRVY 257
Score = 217 (81.4 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 67/234 (28%), Positives = 109/234 (46%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAH-PSGIIAASASLDSFVRVFDVD 90
LL TG D V LW + + TGH V SV + P +I A + S +RV+D++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGS-IRVWDLE 93
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
+ TL + + + F P G +A +G ++KLWD R +G
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEFVA-SGSQDTNIKLWDI------------RRKGCV 140
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
+ S+ V + +SPDG+ +A + D T+ ++D+T K + GH PV + + P
Sbjct: 141 FRYRGHSQA-VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP 199
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
+ +L S S D + +D E +V+ + G V SV +PDG + +G D
Sbjct: 200 -NEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD 252
Score = 209 (78.6 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 67/214 (31%), Positives = 90/214 (42%)
Query: 100 ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKK 159
A S V + L GG V LW N I +L T +S
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL----------TGHTSP-- 65
Query: 160 FVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSA 219
V SV + I GS G+I V+D+ AK L L GH + SL + P V S
Sbjct: 66 -VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA-SG 123
Query: 220 SDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQ 279
S DT++ ++D K V GH+ V + SPDG + + + D TVKLWDL M
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 280 SMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
HT V V F P + S S D++I ++
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 179 (68.1 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 55/205 (26%), Positives = 98/205 (47%)
Query: 28 TRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVF 87
T L++ GS ++++W + ++ RT GH + S+ HP G AS S D+ ++++
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 88 DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE 147
D+ + V ++F P G LA A +VKLWD +++ P
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDH-TVKLWDLTAGKMMS--EFPGHT 189
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLV 207
G P + V + P+ +A GS D TI +D+ + + + +EG PVRS++
Sbjct: 190 G--PVNV---------VEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVL 238
Query: 208 YSPVDPRVLFSASDDT-HVHMYDAE 231
++P D L+S D+ V+ ++ E
Sbjct: 239 FNP-DGCCLYSGCQDSLRVYGWEPE 262
Score = 154 (59.3 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 35/128 (27%), Positives = 62/128 (48%)
Query: 187 VTRAKF-LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASW 245
VT+ + L + H V SLV R+L + DD V+++ + + +++GH S
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 246 VLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSD 305
V SV + I GS ++++WDL ++++ H + + F P G V S S
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 306 DKSISLYE 313
D +I L++
Sbjct: 126 DTNIKLWD 133
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 228 (85.3 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 72/255 (28%), Positives = 114/255 (44%)
Query: 59 HCLGVVS-VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
H V S V SG + A+ D V ++ ++ I +L S V ++ + L
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTP-EEL 77
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS 177
VAG S S+++WD ++ TL K + S+ + P G +A GS
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLM-------------GHKANICSLDFHPYGEFVASGS 124
Query: 178 MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT 237
D I ++D+ R + GH VR L +SP D + L SA+DD V ++D +++
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 238 AMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLG 297
GH V V+ P+ + +GSSDRT++ WDL + + V V F P G
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDG 243
Query: 298 GRVVSVSDDKSISLY 312
+ S D S+ +Y
Sbjct: 244 CCLYSGCQD-SLRVY 257
Score = 217 (81.4 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 67/234 (28%), Positives = 109/234 (46%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAH-PSGIIAASASLDSFVRVFDVD 90
LL TG D V LW + + TGH V SV + P +I A + S +RV+D++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGS-IRVWDLE 93
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
+ TL + + + F P G +A +G ++KLWD R +G
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEFVA-SGSQDTNIKLWDI------------RRKGCV 140
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
+ S+ V + +SPDG+ +A + D T+ ++D+T K + GH PV + + P
Sbjct: 141 FRYRGHSQA-VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP 199
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
+ +L S S D + +D E +V+ + G V SV +PDG + +G D
Sbjct: 200 -NEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD 252
Score = 209 (78.6 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 67/214 (31%), Positives = 90/214 (42%)
Query: 100 ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKK 159
A S V + L GG V LW N I +L T +S
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL----------TGHTSP-- 65
Query: 160 FVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSA 219
V SV + I GS G+I V+D+ AK L L GH + SL + P V S
Sbjct: 66 -VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA-SG 123
Query: 220 SDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQ 279
S DT++ ++D K V GH+ V + SPDG + + + D TVKLWDL M
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 280 SMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
HT V V F P + S S D++I ++
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 179 (68.1 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 55/205 (26%), Positives = 98/205 (47%)
Query: 28 TRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVF 87
T L++ GS ++++W + ++ RT GH + S+ HP G AS S D+ ++++
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 88 DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE 147
D+ + V ++F P G LA A +VKLWD +++ P
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDH-TVKLWDLTAGKMMS--EFPGHT 189
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLV 207
G P + V + P+ +A GS D TI +D+ + + + +EG PVRS++
Sbjct: 190 G--PVNV---------VEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVL 238
Query: 208 YSPVDPRVLFSASDDT-HVHMYDAE 231
++P D L+S D+ V+ ++ E
Sbjct: 239 FNP-DGCCLYSGCQDSLRVYGWEPE 262
Score = 154 (59.3 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 35/128 (27%), Positives = 62/128 (48%)
Query: 187 VTRAKF-LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASW 245
VT+ + L + H V SLV R+L + DD V+++ + + +++GH S
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 246 VLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSD 305
V SV + I GS ++++WDL ++++ H + + F P G V S S
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 306 DKSISLYE 313
D +I L++
Sbjct: 126 DTNIKLWD 133
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 228 (85.3 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 72/255 (28%), Positives = 114/255 (44%)
Query: 59 HCLGVVS-VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
H V S V SG + A+ D V ++ ++ I +L S V ++ + L
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTP-EEL 77
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS 177
VAG S S+++WD ++ TL K + S+ + P G +A GS
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLM-------------GHKANICSLDFHPYGEFVASGS 124
Query: 178 MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT 237
D I ++D+ R + GH VR L +SP D + L SA+DD V ++D +++
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 238 AMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLG 297
GH V V+ P+ + +GSSDRT++ WDL + + V V F P G
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDG 243
Query: 298 GRVVSVSDDKSISLY 312
+ S D S+ +Y
Sbjct: 244 CCLYSGCQD-SLRVY 257
Score = 217 (81.4 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 67/234 (28%), Positives = 109/234 (46%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAH-PSGIIAASASLDSFVRVFDVD 90
LL TG D V LW + + TGH V SV + P +I A + S +RV+D++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGS-IRVWDLE 93
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
+ TL + + + F P G +A +G ++KLWD R +G
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEFVA-SGSQDTNIKLWDI------------RRKGCV 140
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
+ S+ V + +SPDG+ +A + D T+ ++D+T K + GH PV + + P
Sbjct: 141 FRYRGHSQA-VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP 199
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
+ +L S S D + +D E +V+ + G V SV +PDG + +G D
Sbjct: 200 -NEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD 252
Score = 209 (78.6 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 67/214 (31%), Positives = 90/214 (42%)
Query: 100 ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKK 159
A S V + L GG V LW N I +L T +S
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL----------TGHTSP-- 65
Query: 160 FVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSA 219
V SV + I GS G+I V+D+ AK L L GH + SL + P V S
Sbjct: 66 -VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA-SG 123
Query: 220 SDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQ 279
S DT++ ++D K V GH+ V + SPDG + + + D TVKLWDL M
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 280 SMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
HT V V F P + S S D++I ++
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 179 (68.1 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 55/205 (26%), Positives = 98/205 (47%)
Query: 28 TRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVF 87
T L++ GS ++++W + ++ RT GH + S+ HP G AS S D+ ++++
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 88 DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE 147
D+ + V ++F P G LA A +VKLWD +++ P
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDH-TVKLWDLTAGKMMS--EFPGHT 189
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLV 207
G P + V + P+ +A GS D TI +D+ + + + +EG PVRS++
Sbjct: 190 G--PVNV---------VEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVL 238
Query: 208 YSPVDPRVLFSASDDT-HVHMYDAE 231
++P D L+S D+ V+ ++ E
Sbjct: 239 FNP-DGCCLYSGCQDSLRVYGWEPE 262
Score = 154 (59.3 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 35/128 (27%), Positives = 62/128 (48%)
Query: 187 VTRAKF-LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASW 245
VT+ + L + H V SLV R+L + DD V+++ + + +++GH S
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 246 VLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSD 305
V SV + I GS ++++WDL ++++ H + + F P G V S S
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 306 DKSISLYE 313
D +I L++
Sbjct: 126 DTNIKLWD 133
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 228 (85.3 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 72/255 (28%), Positives = 114/255 (44%)
Query: 59 HCLGVVS-VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
H V S V SG + A+ D V ++ ++ I +L S V ++ + L
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTP-EEL 77
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS 177
VAG S S+++WD ++ TL K + S+ + P G +A GS
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLM-------------GHKANICSLDFHPYGEFVASGS 124
Query: 178 MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT 237
D I ++D+ R + GH VR L +SP D + L SA+DD V ++D +++
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 238 AMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLG 297
GH V V+ P+ + +GSSDRT++ WDL + + V V F P G
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDG 243
Query: 298 GRVVSVSDDKSISLY 312
+ S D S+ +Y
Sbjct: 244 CCLYSGCQD-SLRVY 257
Score = 217 (81.4 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 67/234 (28%), Positives = 109/234 (46%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAH-PSGIIAASASLDSFVRVFDVD 90
LL TG D V LW + + TGH V SV + P +I A + S +RV+D++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGS-IRVWDLE 93
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
+ TL + + + F P G +A +G ++KLWD R +G
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEFVA-SGSQDTNIKLWDI------------RRKGCV 140
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
+ S+ V + +SPDG+ +A + D T+ ++D+T K + GH PV + + P
Sbjct: 141 FRYRGHSQA-VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP 199
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
+ +L S S D + +D E +V+ + G V SV +PDG + +G D
Sbjct: 200 -NEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD 252
Score = 209 (78.6 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 67/214 (31%), Positives = 90/214 (42%)
Query: 100 ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKK 159
A S V + L GG V LW N I +L T +S
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL----------TGHTSP-- 65
Query: 160 FVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSA 219
V SV + I GS G+I V+D+ AK L L GH + SL + P V S
Sbjct: 66 -VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA-SG 123
Query: 220 SDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQ 279
S DT++ ++D K V GH+ V + SPDG + + + D TVKLWDL M
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 280 SMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
HT V V F P + S S D++I ++
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 179 (68.1 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 55/205 (26%), Positives = 98/205 (47%)
Query: 28 TRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVF 87
T L++ GS ++++W + ++ RT GH + S+ HP G AS S D+ ++++
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 88 DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE 147
D+ + V ++F P G LA A +VKLWD +++ P
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDH-TVKLWDLTAGKMMS--EFPGHT 189
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLV 207
G P + V + P+ +A GS D TI +D+ + + + +EG PVRS++
Sbjct: 190 G--PVNV---------VEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVL 238
Query: 208 YSPVDPRVLFSASDDT-HVHMYDAE 231
++P D L+S D+ V+ ++ E
Sbjct: 239 FNP-DGCCLYSGCQDSLRVYGWEPE 262
Score = 154 (59.3 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 35/128 (27%), Positives = 62/128 (48%)
Query: 187 VTRAKF-LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASW 245
VT+ + L + H V SLV R+L + DD V+++ + + +++GH S
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 246 VLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSD 305
V SV + I GS ++++WDL ++++ H + + F P G V S S
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 306 DKSISLYE 313
D +I L++
Sbjct: 126 DTNIKLWD 133
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 191 (72.3 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 58/166 (34%), Positives = 82/166 (49%)
Query: 155 SSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPR 214
S + V SV WS D I S D TI V+DV L G+ + + YSP+ R
Sbjct: 254 SGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVESGSLKSTLTGNKV-FNCISYSPLCKR 311
Query: 215 VLFSASDDTHVHMYDAEGK--SLVT-AMSGHASWVLSVDASPDGAA-ITTGSSDRTVKLW 270
L S S D H+ ++D K SLV+ +++ H WV SV SP + +GS D VKLW
Sbjct: 312 -LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370
Query: 271 DL-NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
D + +A + + H D+V V + G + +D+K S Y YS
Sbjct: 371 DTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYS-YRYS 415
Score = 124 (48.7 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 36/122 (29%), Positives = 64/122 (52%)
Query: 196 LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDG 255
L GH V S+++S D + SAS D + ++D E SL + ++G+ + + SP
Sbjct: 253 LSGHMEAVSSVLWS--DAEEICSASWDHTIRVWDVESGSLKSTLTGNKVFNC-ISYSPLC 309
Query: 256 AAITTGSSDRTVKLWDLNMR---AAMQSMTNHTDQVWGVSFRPLGGR-VVSVSDDKSISL 311
+ +GS+DR ++LWD + S+T+HT V V + P + ++S S D + L
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKL 369
Query: 312 YE 313
++
Sbjct: 370 WD 371
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 50/178 (28%), Positives = 85/178 (47%)
Query: 55 TNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQ-MQFDPK 113
T +GH V SV + I SAS D +RV+DV++ + +TL + +V+ + + P
Sbjct: 252 TLSGHMEAVSSVLWSDAEEIC-SASWDHTIRVWDVESGSLKSTLTGN--KVFNCISYSPL 308
Query: 114 GTTLAVAGGGSASVKLWDTATWN-LIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDG-R 171
LA +G ++LWD T + + +LS+ G +V SV WSP +
Sbjct: 309 CKRLA-SGSTDRHIRLWDPRTKDGSLVSLSLTSHTG-----------WVTSVKWSPTHEQ 356
Query: 172 RIACGSMDGTISVFDVTRAKF-LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
++ GS+D + ++D K L+ L H V S+ ++ D +L S D ++ Y
Sbjct: 357 QLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSY 412
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 57/224 (25%), Positives = 98/224 (43%)
Query: 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFD-VDTNASIATLEASPSEVWQMQFDPKGTT 116
GH V S+A SG S S D ++++ V T+ E++ + + + G T
Sbjct: 187 GHAGSVDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLT 246
Query: 117 ---LAVAGGGSASVK--LWD------TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVA 165
+ G +V LW +A+W+ + LK T + K ++
Sbjct: 247 RTPIVTLSGHMEAVSSVLWSDAEEICSASWDHTIRVWDVESGSLKST--LTGNKVFNCIS 304
Query: 166 WSPDGRRIACGSMDGTISVFDV-TRAKFLHHLE--GHFMPVRSLVYSPVDPRVLFSASDD 222
+SP +R+A GS D I ++D T+ L L H V S+ +SP + L S S D
Sbjct: 305 YSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLD 364
Query: 223 THVHMYDAEG-KSLVTAMSGHASWVLSVDASPDGAAITTGSSDR 265
V ++D K+ + ++ H VLSVD + G ++ G+ ++
Sbjct: 365 NIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNK 408
Score = 80 (33.2 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 29/126 (23%), Positives = 54/126 (42%)
Query: 14 EESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVA---AHP 70
E+ ++ W+ + + +LTGS D+T ++W + + T GH V VA
Sbjct: 95 EQCMFHDDWISSIKGAEEWILTGSYDKTSRIWSLEGKSI-MTIVGHTDVVKDVAWVKKDS 153
Query: 71 SGIIAASASLDSFVRVFD--VDTNA--SIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
+ SAS+D + +++ V+ N ++ V + D GT +G
Sbjct: 154 LSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSGTKFC-SGSWDKM 212
Query: 127 VKLWDT 132
+K+W T
Sbjct: 213 LKIWST 218
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 191 (72.3 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 58/166 (34%), Positives = 82/166 (49%)
Query: 155 SSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPR 214
S + V SV WS D I S D TI V+DV L G+ + + YSP+ R
Sbjct: 254 SGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVESGSLKSTLTGNKV-FNCISYSPLCKR 311
Query: 215 VLFSASDDTHVHMYDAEGK--SLVT-AMSGHASWVLSVDASPDGAA-ITTGSSDRTVKLW 270
L S S D H+ ++D K SLV+ +++ H WV SV SP + +GS D VKLW
Sbjct: 312 -LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370
Query: 271 DL-NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
D + +A + + H D+V V + G + +D+K S Y YS
Sbjct: 371 DTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYS-YRYS 415
Score = 124 (48.7 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 36/122 (29%), Positives = 64/122 (52%)
Query: 196 LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDG 255
L GH V S+++S D + SAS D + ++D E SL + ++G+ + + SP
Sbjct: 253 LSGHMEAVSSVLWS--DAEEICSASWDHTIRVWDVESGSLKSTLTGNKVFNC-ISYSPLC 309
Query: 256 AAITTGSSDRTVKLWDLNMR---AAMQSMTNHTDQVWGVSFRPLGGR-VVSVSDDKSISL 311
+ +GS+DR ++LWD + S+T+HT V V + P + ++S S D + L
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKL 369
Query: 312 YE 313
++
Sbjct: 370 WD 371
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 50/178 (28%), Positives = 85/178 (47%)
Query: 55 TNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQ-MQFDPK 113
T +GH V SV + I SAS D +RV+DV++ + +TL + +V+ + + P
Sbjct: 252 TLSGHMEAVSSVLWSDAEEIC-SASWDHTIRVWDVESGSLKSTLTGN--KVFNCISYSPL 308
Query: 114 GTTLAVAGGGSASVKLWDTATWN-LIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDG-R 171
LA +G ++LWD T + + +LS+ G +V SV WSP +
Sbjct: 309 CKRLA-SGSTDRHIRLWDPRTKDGSLVSLSLTSHTG-----------WVTSVKWSPTHEQ 356
Query: 172 RIACGSMDGTISVFDVTRAKF-LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
++ GS+D + ++D K L+ L H V S+ ++ D +L S D ++ Y
Sbjct: 357 QLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSY 412
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 58/224 (25%), Positives = 100/224 (44%)
Query: 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFD-VDTNASIATLEASPSEVWQMQFDPKGTT 116
GH V S+A SG S S D ++++ V T+ E++ + + + G T
Sbjct: 187 GHAGSVDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLT 246
Query: 117 ----LAVAGGGSA-SVKLWD------TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVA 165
+ ++G A S LW +A+W+ + LK T + K ++
Sbjct: 247 RTPVVTLSGHMEAVSSVLWSDAEEICSASWDHTIRVWDVESGSLKST--LTGNKVFNCIS 304
Query: 166 WSPDGRRIACGSMDGTISVFDV-TRAKFLHHLE--GHFMPVRSLVYSPVDPRVLFSASDD 222
+SP +R+A GS D I ++D T+ L L H V S+ +SP + L S S D
Sbjct: 305 YSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLD 364
Query: 223 THVHMYDAEG-KSLVTAMSGHASWVLSVDASPDGAAITTGSSDR 265
V ++D K+ + ++ H VLSVD + G ++ G+ ++
Sbjct: 365 NIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNK 408
Score = 80 (33.2 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 29/126 (23%), Positives = 54/126 (42%)
Query: 14 EESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVA---AHP 70
E+ ++ W+ + + +LTGS D+T ++W + + T GH V VA
Sbjct: 95 EQCMFHDDWISSIKGAEEWILTGSYDKTSRIWSLEGKSI-MTIVGHTDVVKDVAWVKKDS 153
Query: 71 SGIIAASASLDSFVRVFD--VDTNA--SIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
+ SAS+D + +++ V+ N ++ V + D GT +G
Sbjct: 154 LSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSGTKFC-SGSWDKM 212
Query: 127 VKLWDT 132
+K+W T
Sbjct: 213 LKIWST 218
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 226 (84.6 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 54/182 (29%), Positives = 92/182 (50%)
Query: 143 IPRPEGLKPTDKSSSKKFVL--------SVAWSPDGRRIACGSMDGTISVFDVTRAKFLH 194
+P P KP + +KF+L +V +SPD IA G DG + V+ + K ++
Sbjct: 153 VPPPPPPKPESVNYRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIY 212
Query: 195 HLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA-EGKSLVTAMSGHASWVLSVDASP 253
EGH + ++ +SP D + S SDD + +++ GK+ T GH ++V ++ SP
Sbjct: 213 TFEGHLAGISTISWSP-DGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSP 271
Query: 254 DGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
G + +GS D V LWD+ M+S+ H+D V G+ G + S + D + +++
Sbjct: 272 KGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWD 331
Query: 314 YS 315
S
Sbjct: 332 TS 333
Score = 219 (82.2 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 89/324 (27%), Positives = 142/324 (43%)
Query: 7 KSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV 66
K + H V AV + P +++ +G D VK+W +L T GH G+ ++
Sbjct: 169 KFLLRGHLRGVSAVRFSPDA----SMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTI 224
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIAT-LEASPSEVWQMQFDPKGTTLAVAGGGSA 125
+ P G AS S D +R+++V T + T + V+ + F PKG L V+G
Sbjct: 225 SWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNML-VSGSYDE 283
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
+V LWD + ++ +L P P + V W DG IA + DG + ++
Sbjct: 284 AVFLWDVRSARVMKSL----PAHSDPVSG-------IDVVW--DGTLIASCATDGLVRIW 330
Query: 186 DVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHA 243
D + + L L PV S+ +SP VL DD V ++D EG+ L T GH+
Sbjct: 331 DTSTGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDC-VRLWDYVEGRCLKT-YQGHS 388
Query: 244 SWVLSVDAS------------PDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGV 291
+ S+ + P A +GS D + WD+ + +Q + H V GV
Sbjct: 389 NKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGV 448
Query: 292 SFRPLG-GR-VVSVSDDKSISLYE 313
G GR +VS D ++ ++E
Sbjct: 449 DTCSTGEGRFMVSCGLDGTVRVWE 472
Score = 206 (77.6 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 61/211 (28%), Positives = 104/211 (49%)
Query: 108 MQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS 167
++F P + +A +GG +VK+W +T LI T EG + +++WS
Sbjct: 182 VRFSPDASMIA-SGGADGAVKVWAASTGKLIYTF-----EG--------HLAGISTISWS 227
Query: 168 PDGRRIACGSMDGTISVFDVTRAKFLHHLE--GHFMPVRSLVYSPVDPRVLFSASDDTHV 225
PDG IA GS D TI +++V K H GH V ++ +SP +L S S D V
Sbjct: 228 PDGATIASGSDDKTIRLWNVLTGK-AHPTPFIGHHNYVYAIAFSPKG-NMLVSGSYDEAV 285
Query: 226 HMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHT 285
++D ++ ++ H+ V +D DG I + ++D V++WD + ++++ H
Sbjct: 286 FLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLV-HE 344
Query: 286 DQ--VWGVSFRPLGGRVVSVSDDKSISLYEY 314
D V V F P G V++ + D + L++Y
Sbjct: 345 DNPPVSSVKFSPNGKYVLAWTLDDCVRLWDY 375
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 227 (85.0 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 71/255 (27%), Positives = 114/255 (44%)
Query: 59 HCLGVVS-VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
H V S V SG + A+ D V ++ ++ I +L S V ++ + L
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTP-EEL 77
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS 177
VAG S S+++WD ++ TL K + S+ + P G +A GS
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLM-------------GHKANICSLDFHPYGEFVASGS 124
Query: 178 MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT 237
D I ++D+ R + GH VR L +SP D + L SA+DD V ++D +++
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 238 AMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLG 297
GH V V+ P+ + +GSSDRT++ WDL + + V + F P G
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDG 243
Query: 298 GRVVSVSDDKSISLY 312
+ S D S+ +Y
Sbjct: 244 CCLYSGCQD-SLRVY 257
Score = 216 (81.1 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 66/234 (28%), Positives = 109/234 (46%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAH-PSGIIAASASLDSFVRVFDVD 90
LL TG D V LW + + TGH V SV + P +I A + S +RV+D++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGS-IRVWDLE 93
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
+ TL + + + F P G +A +G ++KLWD R +G
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEFVA-SGSQDTNIKLWDI------------RRKGCV 140
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
+ S+ V + +SPDG+ +A + D T+ ++D+T K + GH PV + + P
Sbjct: 141 FRYRGHSQA-VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP 199
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
+ +L S S D + +D E +V+ + G V S+ +PDG + +G D
Sbjct: 200 -NEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQD 252
Score = 209 (78.6 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 67/214 (31%), Positives = 90/214 (42%)
Query: 100 ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKK 159
A S V + L GG V LW N I +L T +S
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL----------TGHTSP-- 65
Query: 160 FVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSA 219
V SV + I GS G+I V+D+ AK L L GH + SL + P V S
Sbjct: 66 -VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA-SG 123
Query: 220 SDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQ 279
S DT++ ++D K V GH+ V + SPDG + + + D TVKLWDL M
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 280 SMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
HT V V F P + S S D++I ++
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 180 (68.4 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 55/205 (26%), Positives = 98/205 (47%)
Query: 28 TRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVF 87
T L++ GS ++++W + ++ RT GH + S+ HP G AS S D+ ++++
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 88 DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE 147
D+ + V ++F P G LA A +VKLWD +++ P
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDH-TVKLWDLTAGKMMS--EFPGHT 189
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLV 207
G P + V + P+ +A GS D TI +D+ + + + +EG PVRS++
Sbjct: 190 G--PVNV---------VEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSIL 238
Query: 208 YSPVDPRVLFSASDDT-HVHMYDAE 231
++P D L+S D+ V+ ++ E
Sbjct: 239 FNP-DGCCLYSGCQDSLRVYGWEPE 262
Score = 154 (59.3 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 35/128 (27%), Positives = 62/128 (48%)
Query: 187 VTRAKF-LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASW 245
VT+ + L + H V SLV R+L + DD V+++ + + +++GH S
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 246 VLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSD 305
V SV + I GS ++++WDL ++++ H + + F P G V S S
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 306 DKSISLYE 313
D +I L++
Sbjct: 126 DTNIKLWD 133
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 227 (85.0 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 66/215 (30%), Positives = 98/215 (45%)
Query: 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
GH V S P G S+S D+ +R++ NA++ + VW QF P G
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYF 475
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS 177
A + ++W + + I L I L D V W P+ IA GS
Sbjct: 476 ASCSH-DRTARIW---SMDRIQPLRIMAGH-LSDVD---------CVQWHPNCNYIATGS 521
Query: 178 MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT 237
D T+ ++DV + + GH V SL SP D R + S +D + M+D +T
Sbjct: 522 SDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSP-DGRYMASGDEDGTIMMWDLSTARCIT 580
Query: 238 AMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ GH S V S+ S +G+ + +GS+D TVKLWD+
Sbjct: 581 PLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDV 615
Score = 194 (73.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 63/243 (25%), Positives = 101/243 (41%)
Query: 71 SGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLW 130
+G A A DS + + S L V+ F P G ++ +++LW
Sbjct: 387 AGSGALQAENDSSDQSIGPNGRRSYTLLLGHSGPVYSATFSPPGD-FVLSSSADTTIRLW 445
Query: 131 DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRA 190
T L A L + P V +SP G A S D T ++ + R
Sbjct: 446 ST---KLNANLVCYKGHNY-P---------VWDAQFSPFGHYFASCSHDRTARIWSMDRI 492
Query: 191 KFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVD 250
+ L + GH V + + P + +SD T V ++D + V GH S VLS+
Sbjct: 493 QPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKT-VRLWDVQTGECVRIFIGHRSMVLSLA 551
Query: 251 ASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSIS 310
SPDG + +G D T+ +WDL+ + + H VW +S+ G + S S D ++
Sbjct: 552 MSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVK 611
Query: 311 LYE 313
L++
Sbjct: 612 LWD 614
Score = 186 (70.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 64/225 (28%), Positives = 99/225 (44%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H V++ T+ P + +L+ S D T++LW GH V P G
Sbjct: 417 HSGPVYSATFSPPGD----FVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFG 472
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
AS S D R++ +D + + S+V +Q+ P +A G +V+LWD
Sbjct: 473 HYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIAT-GSSDKTVRLWDV 531
Query: 133 ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF 192
T + + VLS+A SPDGR +A G DGTI ++D++ A+
Sbjct: 532 QTGECVRIFI-------------GHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARC 578
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT 237
+ L GH V SL YS + +L S S D V ++D + +T
Sbjct: 579 ITPLMGHNSCVWSLSYSG-EGSLLASGSADCTVKLWDVTSSTKLT 622
Score = 168 (64.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 57/209 (27%), Positives = 91/209 (43%)
Query: 119 VAGGGS-ASVKLWDTATWNLIATLSIPRP-----EGLKPTDKSSSKKF------VLSVAW 166
VAGG S +S+K+WD A + ++ + + P + S V S +
Sbjct: 367 VAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSIGPNGRRSYTLLLGHSGPVYSATF 426
Query: 167 SPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVH 226
SP G + S D TI ++ L +GH PV +SP S S D
Sbjct: 427 SPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFG-HYFASCSHDRTAR 485
Query: 227 MYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTD 286
++ + + M+GH S V V P+ I TGSSD+TV+LWD+ ++ H
Sbjct: 486 IWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRS 545
Query: 287 QVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
V ++ P G + S +D +I +++ S
Sbjct: 546 MVLSLAMSPDGRYMASGDEDGTIMMWDLS 574
Score = 148 (57.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 50/173 (28%), Positives = 76/173 (43%)
Query: 37 SLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIA 96
S D T ++W D +Q R GH V V HP+ A+ S D VR++DV T +
Sbjct: 479 SHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVR 538
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
S V + P G +A +G ++ +WD +T I L
Sbjct: 539 IFIGHRSMVLSLAMSPDGRYMA-SGDEDGTIMMWDLSTARCITPLM-------------G 584
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLE---GHFMPVRSL 206
V S+++S +G +A GS D T+ ++DVT + L E G+ +RSL
Sbjct: 585 HNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSL 637
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 223 (83.6 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 83/312 (26%), Positives = 132/312 (42%)
Query: 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRP-DDMQLERTNTGHCLGVVSVAAH 69
+ HE V+ + P T L + D + LW D T GH V+ + +
Sbjct: 90 SGHEGEVYCCKFHPWGNT----LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 145
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
G + SAS D V V+D +T + L+ S V +G L G +VKL
Sbjct: 146 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 205
Query: 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
WD R + T +++ + VL+V ++ +I G +D I V+D+ +
Sbjct: 206 WDI------------RKKAAVQTFQNTYQ--VLAVTFNDTSDQIISGGIDNDIKVWDLRQ 251
Query: 190 AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD----AEGKSLVTAMSGHA-- 243
K + + GH V L S +L +A D+T V ++D A + V G+
Sbjct: 252 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNT-VRIWDVRPFAPKERCVKIFQGNVHN 310
Query: 244 --SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301
+L SPDG+ I GS+DR V +WD R + + H V ++F P ++
Sbjct: 311 FEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIIL 370
Query: 302 SVSDDKSISLYE 313
S S DK + + E
Sbjct: 371 SASSDKRLYMGE 382
Score = 182 (69.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 60/222 (27%), Positives = 100/222 (45%)
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT-ATWNLIATLSIPRPEGLKP 151
A I L EV+ +F P G TLA AG + LW+ + ATL
Sbjct: 84 APIMLLSGHEGEVYCCKFHPWGNTLASAGFDRL-ILLWNVYGDCDNYATL---------- 132
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
K S V+ + ++ DG + S D T++V+D + + L+GH V S +
Sbjct: 133 --KGHSGA-VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 189
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
P+++ + SDD V ++D K+ V + VL+V + I +G D +K+WD
Sbjct: 190 GPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWD 248
Query: 272 LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
L +M H D V G+S G ++S + D ++ +++
Sbjct: 249 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWD 290
Score = 132 (51.5 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 55/254 (21%), Positives = 115/254 (45%)
Query: 28 TRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV-AAHPSGIIAASASLDSFVRV 86
T ++L + S D+TV +W + + + GH V S A + + S D V++
Sbjct: 146 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 205
Query: 87 FDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRP 146
+D+ A++ T + + +V + F+ + ++GG +K+WD L T+
Sbjct: 206 WDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQI-ISGGIDNDIKVWDLRQNKLTYTM----- 258
Query: 147 EGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT----RAKFLHHLEGHFMP 202
G D V ++ S +G + +MD T+ ++DV + + + +G+
Sbjct: 259 RG--HADS------VTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHN 310
Query: 203 V-RSLV---YSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAI 258
++L+ +SP D + S D V+++D + ++ + GHA V + P+ I
Sbjct: 311 FEKNLLRCSWSP-DGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPII 369
Query: 259 TTGSSDRTVKLWDL 272
+ SSD+ + + ++
Sbjct: 370 LSASSDKRLYMGEI 383
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 221 (82.9 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 69/247 (27%), Positives = 111/247 (44%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL + S D T+KLW + RT GH V SVA P+G SAS D +++++V T
Sbjct: 99 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 158
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS----IPRPE 147
+ T V ++ + GT +A +V++W AT A L +
Sbjct: 159 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ-TVRVWVVATKECKAELREHEHVVECI 217
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRR---IACGSMDGTISVFDVTRAKFLHHLEGHFMPVR 204
P SS G+ + GS D TI ++DV+ L L GH VR
Sbjct: 218 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR 277
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
+++ + + S +DD + ++D + K + ++ H +V S+D + TGS D
Sbjct: 278 GVLFHS-GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 336
Query: 265 RTVKLWD 271
+TVK+W+
Sbjct: 337 QTVKVWE 343
Score = 210 (79.0 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 77/292 (26%), Positives = 127/292 (43%)
Query: 43 KLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASP 102
K W P + + +GH V V HP + SAS D+ ++V+D +T TL+
Sbjct: 27 KEWIPRPPE-KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 85
Query: 103 SEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVL 162
V + FD G LA ++KLWD + I T+ G D + S
Sbjct: 86 DSVQDISFDHSGKLLASCSA-DMTIKLWDFQGFECIRTM-----HG---HDHNVS----- 131
Query: 163 SVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
SVA P+G I S D TI +++V + GH VR +V D ++ S S+D
Sbjct: 132 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR-MVRPNQDGTLIASCSND 190
Query: 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPD--------------------GAAITTGS 262
V ++ K + H V + +P+ G + +GS
Sbjct: 191 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 250
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
D+T+K+WD++ + ++ H + V GV F G ++S +DDK++ +++Y
Sbjct: 251 RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302
Score = 121 (47.7 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 216 LFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
L S S D + M+D G L+T + GH +WV V G I + + D+T+++WD
Sbjct: 246 LLSGSRDKTIKMWDVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 304
Query: 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ M+++ H V + F VV+ S D+++ ++E
Sbjct: 305 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 115 (45.5 bits), Expect = 0.00043, P = 0.00043
Identities = 36/125 (28%), Positives = 54/125 (43%)
Query: 12 AHEESVWAVTWVPATETRPA-----LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV 66
A E S +++ +ET+ + LL+GS D+T+K+W T GH V V
Sbjct: 220 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 279
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
H G S + D +RV+D + TL A V + F K V G +
Sbjct: 280 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTAPYVVTGSVDQT 338
Query: 127 VKLWD 131
VK+W+
Sbjct: 339 VKVWE 343
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 225 (84.3 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 73/304 (24%), Positives = 138/304 (45%)
Query: 13 HEESVWAVTWVPATETRPAL--LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHP 70
H + + ++W P P + + S D +V++W + ER TGH V +
Sbjct: 198 HSKWITGLSWEPL-HANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGG 256
Query: 71 SGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLW 130
G++ SAS D ++V+ TL+ W T+A++ + +
Sbjct: 257 DGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGH--WV-------NTMALSTDYALRTGAF 306
Query: 131 DTATWNLIATLSIPRPEG-LKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
+ A A+++ +G L+ + + ++ L P+ R+ GS D T+ ++
Sbjct: 307 EPAE----ASVNPQDLQGSLQELKERALSRYNLVRGQGPE--RLVSGSDDFTLFLWSPAE 360
Query: 190 AKF-LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248
K L + GH + +++SP D R++ SAS D + ++D + ++ GH + V
Sbjct: 361 DKKPLTRMTGHQALINQVLFSP-DSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQ 419
Query: 249 VDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKS 308
+ S D + +GSSD T+K+WD+ + + H D+V+ V + P G RV S DK
Sbjct: 420 IAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKC 479
Query: 309 ISLY 312
+ ++
Sbjct: 480 LRIW 483
Score = 199 (75.1 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 73/265 (27%), Positives = 123/265 (46%)
Query: 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
GH V+SVA P+G AS S D+ VR +D+ T T + V + + P G L
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKL 171
Query: 118 AVAGGGSASVKLWDTATWNLIA-TLSIPRPEGLKPTDKSSSKKFVLSVAW-----SPDGR 171
A +G + + LWD +T + TL+ K++ ++W +P+ R
Sbjct: 172 A-SGCKNGQILLWDPSTGKQVGRTLA-------------GHSKWITGLSWEPLHANPECR 217
Query: 172 RIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAE 231
+A S DG++ ++D T + L GH V L + +L+SAS D + ++ A
Sbjct: 218 YVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWG--GDGLLYSASQDRTIKVWRAH 275
Query: 232 GKSLVTAMSGHASWVLSVDASPDGAAITTGS---SDRTVKLWDLNMRAAMQSMTNHTDQV 288
L + GH WV ++ S D A+ TG+ ++ +V DL + ++Q +
Sbjct: 276 DGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEASVNPQDL--QGSLQELKERALSR 332
Query: 289 WGVSFRPLGG-RVVSVSDDKSISLY 312
+ + R G R+VS SDD ++ L+
Sbjct: 333 YNL-VRGQGPERLVSGSDDFTLFLW 356
Score = 185 (70.2 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 57/194 (29%), Positives = 93/194 (47%)
Query: 96 ATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKS 155
++LE V + F P G LA +G G +V+ WD LS P T K
Sbjct: 108 SSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWD---------LSTETPHF---TCKG 154
Query: 156 SSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHH-LEGHFMPVRSLVYSPV--D 212
+ +VLS++WSPDGR++A G +G I ++D + K + L GH + L + P+ +
Sbjct: 155 H-RHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHAN 213
Query: 213 P--RVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
P R + S+S D V ++D ++GH V + DG + + S DRT+K+W
Sbjct: 214 PECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 272
Query: 271 DLNMRAAMQSMTNH 284
+ +++ H
Sbjct: 273 RAHDGVLCRTLQGH 286
Score = 173 (66.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 74/309 (23%), Positives = 130/309 (42%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD-MQLERTNTGHCLGVVSVA---- 67
H V +++W P + R L +G + + LW P Q+ RT GH + ++
Sbjct: 155 HRHWVLSISWSP--DGRK--LASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPL 210
Query: 68 -AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
A+P AS+S D VR++D L V +++ G L + +
Sbjct: 211 HANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQDRT 268
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSV-AWSPDGRRIACGSMDGTISVF 185
+K+W L TL + G + S + L A+ P + + G++
Sbjct: 269 IKVWRAHDGVLCRTL---QGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGSLQEL 325
Query: 186 DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHAS 244
RA ++L VR P L S SDD + ++ AE K +T M+GH +
Sbjct: 326 K-ERALSRYNL------VRGQ-----GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQA 373
Query: 245 WVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVS 304
+ V SPD + + S D+++KLWD + S+ H V+ +++ +VS S
Sbjct: 374 LINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGS 433
Query: 305 DDKSISLYE 313
D ++ +++
Sbjct: 434 SDSTLKVWD 442
Score = 159 (61.0 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 39/124 (31%), Positives = 63/124 (50%)
Query: 196 LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDG 255
LEGH V S+ +SP + L S S DT V +D ++ GH WVLS+ SPDG
Sbjct: 110 LEGHSEAVISVAFSPTG-KYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDG 168
Query: 256 AAITTGSSDRTVKLWDLNM-RAAMQSMTNHTDQVWGVSFRPLGGR-----VVSVSDDKSI 309
+ +G + + LWD + + +++ H+ + G+S+ PL V S S D S+
Sbjct: 169 RKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSV 228
Query: 310 SLYE 313
+++
Sbjct: 229 RIWD 232
Score = 114 (45.2 bits), Expect = 0.00097, P = 0.00097
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 237 TAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPL 296
+++ GH+ V+SV SP G + +GS D TV+ WDL+ + H V +S+ P
Sbjct: 108 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPD 167
Query: 297 GGRVVSVSDDKSISLYEYS 315
G ++ S + I L++ S
Sbjct: 168 GRKLASGCKNGQILLWDPS 186
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 222 (83.2 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 74/288 (25%), Positives = 126/288 (43%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
L+ + D TVK+W P + H V SV +G + +AS D +++ V
Sbjct: 74 LVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVAR 133
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+++ + V +F P G +A A SV+++D + + T
Sbjct: 134 RQFVSSFAQQNNWVRSAKFSPNGKLVATASDDK-SVRIYDVDSGECVRTF---------- 182
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
T++ ++ + +AW P G +A I +FDV+ ++ L H PV + + P
Sbjct: 183 TEERAAPR---QLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHP- 238
Query: 212 DPRVLFSASDDTHVHMYDA-EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
L S SDD + + D EG+ + T ++GH V +V S DG TG SDR + +W
Sbjct: 239 SGHFLLSGSDDRTIRILDLLEGRPIYT-LTGHTDAVNAVAFSRDGDKFATGGSDRQLLVW 297
Query: 271 DLNMRA-------AMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISL 311
N+ A ++ + + + GVS + G S S+D SI +
Sbjct: 298 QSNLHTYDASQFEAKSALASSSCESSGVSSKQSEGSSTSKSNDLSIRI 345
Score = 213 (80.0 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 68/283 (24%), Positives = 117/283 (41%)
Query: 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90
A + T S D TV LW + H V VA P G + ASA D V++++
Sbjct: 31 AQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGNLVASAGHDRTVKIWEPK 90
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
A V + FD G + A S K+W A +++ +
Sbjct: 91 LRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDK-SAKIWRVARRQFVSSFA-------- 141
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
+V S +SP+G+ +A S D ++ ++DV + + R L + P
Sbjct: 142 -----QQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHP 196
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
+L A + ++D G L+ H++ V V P G + +GS DRT+++
Sbjct: 197 WG-NMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRIL 255
Query: 271 DLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
DL + ++T HTD V V+F G + + D+ + +++
Sbjct: 256 DLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVWQ 298
Score = 199 (75.1 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 68/265 (25%), Positives = 121/265 (45%)
Query: 49 DMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQM 108
D LER TGH G+ + P G A++S DS V +++++ A + + V +
Sbjct: 7 DPALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGV 66
Query: 109 QFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP 168
+ PKG +A AG +VK+W+ P+ G+ + SK V SV +
Sbjct: 67 AWSPKGNLVASAGH-DRTVKIWE------------PKLRGVSGEFVAHSKA-VRSVDFDS 112
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
G + S D + ++ V R +F+ VRS +SP + +++ +ASDD V +Y
Sbjct: 113 TGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSP-NGKLVATASDDKSVRIY 171
Query: 229 DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQV 288
D + V + + + P G + +K++D++ +Q H+ V
Sbjct: 172 DVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPV 231
Query: 289 WGVSFRPLGGRVVSVSDDKSISLYE 313
V+F P G ++S SDD++I + +
Sbjct: 232 NDVAFHPSGHFLLSGSDDRTIRILD 256
Score = 192 (72.6 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 73/277 (26%), Positives = 130/277 (46%)
Query: 2 KFAGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCL 61
K G+ AH ++V +V + ++ L+LT S D++ K+WR Q +
Sbjct: 90 KLRGVSGEFVAHSKAVRSVDF----DSTGHLMLTASDDKSAKIWRVARRQFVSSFAQQNN 145
Query: 62 GVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAG 121
V S P+G + A+AS D VR++DVD+ + T + Q+ + P G LAVA
Sbjct: 146 WVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVAL 205
Query: 122 GGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGT 181
G + +K++D + L+ + P + VA+ P G + GS D T
Sbjct: 206 GCNR-IKIFDVSGSQLLQLYVVHSA----PVN---------DVAFHPSGHFLLSGSDDRT 251
Query: 182 ISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASD------DTHVHMYDA---EG 232
I + D+ + ++ L GH V ++ +S + SD +++H YDA E
Sbjct: 252 IRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVWQSNLHTYDASQFEA 311
Query: 233 KSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKL 269
KS + + S +S V S + +G++ T+ S+D ++++
Sbjct: 312 KSALASSSCESSGVSSKQS--EGSS-TSKSNDLSIRI 345
>ASPGD|ASPL0000042645 [details] [associations]
symbol:AN1468 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR027106 PANTHER:PTHR19846
EMBL:AACD01000022 InterPro:IPR014906 Pfam:PF08799
HOGENOM:HOG000157615 KO:K12662 OMA:CKIWDLR OrthoDB:EOG4V1B90
RefSeq:XP_659072.1 ProteinModelPortal:Q5BDB2 SMR:Q5BDB2
STRING:Q5BDB2 EnsemblFungi:CADANIAT00008085 GeneID:2875152
KEGG:ani:AN1468.2 Uniprot:Q5BDB2
Length = 521
Score = 224 (83.9 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 89/297 (29%), Positives = 134/297 (45%)
Query: 13 HEESVWAVTWVP-AT--ETR---PAL-LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS 65
H + V ++W P AT E+ A+ ++G + V LW D Q T GH V
Sbjct: 238 HTDRVGGLSWFPGATLPESNVSESAVNFVSGGGEGNVCLWSLDKDQPLATLEGHSGRVCR 297
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
HPSG ASAS D+ R++DV+T A + E EV+ + F+ G+ LA +GG +
Sbjct: 298 TEFHPSGKYIASASYDTTWRLWDVETTAELQLQEGHSREVYTVAFNNDGSLLA-SGGLDS 356
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
++WD T + L EG + + + W DG R+ GS DG + +
Sbjct: 357 IGRVWDLRTGRTVMIL-----EG--------HIREIFGLDWGVDGYRVLSGSGDGWVKCW 403
Query: 186 DVTRAKFLHHLEGH-----------------FMPV------RSLV---YSPVDPR---VL 216
D+ + K + H F+P R V +PV PR
Sbjct: 404 DLRQVKNTGGIGAHKSVVSDVRWYKGSESASFLPTTEGQPGRMDVDGATAPVQPRKSGTF 463
Query: 217 FSASD-DTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
F +S D +V+++ A+ SL+ +SGH+ VLS D S + I + DRTVKLW +
Sbjct: 464 FVSSGFDKNVNIFSADDWSLIKTLSGHSGNVLSADISNNAQWIASCGHDRTVKLWGI 520
Score = 137 (53.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 35/138 (25%), Positives = 68/138 (49%)
Query: 176 GSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSL 235
G +G + ++ + + + L LEGH V + P + + SAS DT ++D E +
Sbjct: 268 GGGEGNVCLWSLDKDQPLATLEGHSGRVCRTEFHP-SGKYIASASYDTTWRLWDVETTAE 326
Query: 236 VTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRP 295
+ GH+ V +V + DG+ + +G D ++WDL + + H +++G+ +
Sbjct: 327 LQLQEGHSREVYTVAFNNDGSLLASGGLDSIGRVWDLRTGRTVMILEGHIREIFGLDWGV 386
Query: 296 LGGRVVSVSDDKSISLYE 313
G RV+S S D + ++
Sbjct: 387 DGYRVLSGSGDGWVKCWD 404
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 39/147 (26%), Positives = 68/147 (46%)
Query: 166 WSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGH--------FMPVRSLVYSPV-DPRVL 216
++PDG+ IA G+ G I + V + ++GH + P +L S V + V
Sbjct: 205 FAPDGQTIATGNWGGGIRLLGVPNLEEKLSVKGHTDRVGGLSWFPGATLPESNVSESAVN 264
Query: 217 F-SASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMR 275
F S + +V ++ + + + GH+ V + P G I + S D T +LWD+
Sbjct: 265 FVSGGGEGNVCLWSLDKDQPLATLEGHSGRVCRTEFHPSGKYIASASYDTTWRLWDVETT 324
Query: 276 AAMQSMTNHTDQVWGVSFRPLGGRVVS 302
A +Q H+ +V+ V+F G + S
Sbjct: 325 AELQLQEGHSREVYTVAFNNDGSLLAS 351
>SGD|S000006382 [details] [associations]
symbol:PRP4 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 SGD:S000006382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006949 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 EMBL:U25842 GO:GO:0046540
EMBL:M26597 HOGENOM:HOG000157615 KO:K12662
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:M28518 PIR:A32569
RefSeq:NP_015504.1 ProteinModelPortal:P20053 SMR:P20053
DIP:DIP-2607N IntAct:P20053 MINT:MINT-423902 STRING:P20053
PaxDb:P20053 EnsemblFungi:YPR178W GeneID:856307 KEGG:sce:YPR178W
CYGD:YPR178w OrthoDB:EOG4V1B90 NextBio:981676 Genevestigator:P20053
GermOnline:YPR178W Uniprot:P20053
Length = 465
Score = 223 (83.6 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 67/265 (25%), Positives = 124/265 (46%)
Query: 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD-MQLERTNTGHCLGVVSVAAH 69
++H + A+ W P + + L + + + ++L GH + V H
Sbjct: 215 DSHVGKIGAIDWHPDSNNQMISCAEDGLIKNFQYSNEEGGLRLLGDLVGHERRISDVKYH 274
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
PSG SAS D R++D T+ + E V+ + F G+ L +GG + L
Sbjct: 275 PSGKFIGSASHDMTWRLWDASTHQELLLQEGHDKGVFSLSFQCDGS-LVCSGGMDSLSML 333
Query: 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
WD + + + TL+ SK + +VAWSP+G ++A G DG I+V+D+ +
Sbjct: 334 WDIRSGSKVMTLA------------GHSKP-IYTVAWSPNGYQVATGGGDGIINVWDIRK 380
Query: 190 AKF--LHHLEGHFMPVRSLVYSPVDP-RVLFSASDDTHVHMYDAEGKSLVTAMSGHASWV 246
L+ + H V + +S D + L S D +++Y ++ + +++GH +
Sbjct: 381 RDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCGYDNLINVYSSDTWLKMGSLAGHTDKI 440
Query: 247 LSVDASPDGAAITTGSSDRTVKLWD 271
+S+D S + + +G DR++KLW+
Sbjct: 441 ISLDISNNSHFLVSGGWDRSIKLWN 465
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 47/189 (24%), Positives = 84/189 (44%)
Query: 133 ATWNLIATLSIPRPEGLKP-TDKSSSKKFVL-SVAWSPDGRR--IACGSMDGTISVFDVT 188
AT + L + + L+P T K S + ++ W PD I+C DG I F +
Sbjct: 191 ATGSWAGDLQVLNSQTLQPLTQKLDSHVGKIGAIDWHPDSNNQMISCAE-DGLIKNFQYS 249
Query: 189 RA----KFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHAS 244
+ L L GH + + Y P + + SAS D ++DA + GH
Sbjct: 250 NEEGGLRLLGDLVGHERRISDVKYHP-SGKFIGSASHDMTWRLWDASTHQELLLQEGHDK 308
Query: 245 WVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVS 304
V S+ DG+ + +G D LWD+ + + ++ H+ ++ V++ P G +V +
Sbjct: 309 GVFSLSFQCDGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQVATGG 368
Query: 305 DDKSISLYE 313
D I++++
Sbjct: 369 GDGIINVWD 377
Score = 151 (58.2 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 70/272 (25%), Positives = 116/272 (42%)
Query: 51 QLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQ--- 107
+L+R G V+ P I A S S D V V T + L+ S+ Q
Sbjct: 158 ELQRMANLELAGSQLVSTKP--ISAVSLSTDDMV----VATGSWAGDLQVLNSQTLQPLT 211
Query: 108 MQFDPK-GTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEG-LKPT-DKSSSKKFVLSV 164
+ D G A+ ++ ++ A LI EG L+ D ++ + V
Sbjct: 212 QKLDSHVGKIGAIDWHPDSNNQMISCAEDGLIKNFQYSNEEGGLRLLGDLVGHERRISDV 271
Query: 165 AWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTH 224
+ P G+ I S D T ++D + + L EGH V SL + D ++ S D+
Sbjct: 272 KYHPSGKFIGSASHDMTWRLWDASTHQELLLQEGHDKGVFSLSFQ-CDGSLVCSGGMDSL 330
Query: 225 VHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMR--AAMQSMT 282
++D S V ++GH+ + +V SP+G + TG D + +WD+ R + +
Sbjct: 331 SMLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGIINVWDIRKRDEGQLNQIL 390
Query: 283 NHTDQVWGVSF-RPLGGR-VVSVSDDKSISLY 312
H + V V F + GG+ +VS D I++Y
Sbjct: 391 AHRNIVTQVRFSKEDGGKKLVSCGYDNLINVY 422
Score = 118 (46.6 bits), Expect = 0.00033, P = 0.00033
Identities = 59/295 (20%), Positives = 117/295 (39%)
Query: 28 TRPALLLTGSLDETVKLWRPDDMQ-LERTNTGHCLGVVSVAAHP-SGIIAASASLDSFVR 85
T ++ TGS +++ +Q L + H + ++ HP S S + D ++
Sbjct: 185 TDDMVVATGSWAGDLQVLNSQTLQPLTQKLDSHVGKIGAIDWHPDSNNQMISCAEDGLIK 244
Query: 86 VFDVDTNAS----IATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL 141
F + L + +++ P G + A + +LWD +T +
Sbjct: 245 NFQYSNEEGGLRLLGDLVGHERRISDVKYHPSGKFIGSASH-DMTWRLWDASTHQELLL- 302
Query: 142 SIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFM 201
EG DK V S+++ DG + G MD ++D+ + L GH
Sbjct: 303 ----QEG---HDKG-----VFSLSFQCDGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHSK 350
Query: 202 PVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKS--LVTAMSGHASWVLSVDASPD--GAA 257
P+ ++ +SP +V D ++++D + + + H + V V S + G
Sbjct: 351 PIYTVAWSPNGYQVATGGGDGI-INVWDIRKRDEGQLNQILAHRNIVTQVRFSKEDGGKK 409
Query: 258 ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+ + D + ++ + M S+ HTD++ + +VS D+SI L+
Sbjct: 410 LVSCGYDNLINVYSSDTWLKMGSLAGHTDKIISLDISNNSHFLVSGGWDRSIKLW 464
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 226 (84.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 67/244 (27%), Positives = 110/244 (45%)
Query: 71 SGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLW 130
S + + D V ++ + +I +L S + + FD L AG S ++KLW
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDAS-EVLVAAGAASGTIKLW 86
Query: 131 DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRA 190
D ++ TL T S+ +SV + P G A GS+D + ++D+ +
Sbjct: 87 DLEEAKIVRTL----------TGHRSN---CISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
Query: 191 KFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVD 250
+H +GH V L ++P D R + S +D V ++D L+T H + S+D
Sbjct: 134 GCIHTYKGHTRGVNVLRFTP-DGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLD 192
Query: 251 ASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSIS 310
P + TGS+DRTVK WDL + S T V +SF P G+ V +S+
Sbjct: 193 FHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNP-DGKTVLCGLQESLK 251
Query: 311 LYEY 314
++ +
Sbjct: 252 IFSW 255
Score = 189 (71.6 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 60/242 (24%), Positives = 109/242 (45%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
+L+TG D V LW + GH G+ SV S ++ A+ + ++++D++
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE 90
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ TL S + F P G A +G ++K+WD R +G
Sbjct: 91 AKIVRTLTGHRSNCISVDFHPFGEFFA-SGSLDTNLKIWDI------------RKKGCIH 137
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
T K ++ V + ++PDGR + G D + V+D+T K L + H ++SL + P
Sbjct: 138 TYKGHTRG-VNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPH 196
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKL-- 269
+ +L + S D V +D E L+ + + V + +PDG + G + ++K+
Sbjct: 197 E-FLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQE-SLKIFS 254
Query: 270 WD 271
W+
Sbjct: 255 WE 256
Score = 178 (67.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 52/201 (25%), Positives = 87/201 (43%)
Query: 113 KGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRR 172
K + + V GG V LW N I +L G+ +S+ VL
Sbjct: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSL-YGHSSGIDSVTFDASE--VL---------- 73
Query: 173 IACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG 232
+A G+ GTI ++D+ AK + L GH S+ + P S S DT++ ++D
Sbjct: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG-EFFASGSLDTNLKIWDIRK 132
Query: 233 KSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVS 292
K + GH V + +PDG + +G D VK+WDL + +H Q+ +
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLD 192
Query: 293 FRPLGGRVVSVSDDKSISLYE 313
F P + + S D+++ ++
Sbjct: 193 FHPHEFLLATGSADRTVKFWD 213
Score = 177 (67.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 57/217 (26%), Positives = 99/217 (45%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H + +VT+ A+E L+ G+ T+KLW ++ ++ RT TGH +SV HP G
Sbjct: 58 HSSGIDSVTF-DASEV---LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
AS SLD+ ++++D+ I T + V ++F P G + V+GG VK+WD
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWV-VSGGEDNIVKVWDL 172
Query: 133 ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF 192
L+ T+ S + + S+ + P +A GS D T+ +D+ +
Sbjct: 173 TAGKLL-------------TEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFEL 219
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
+ VR L ++P VL + + ++
Sbjct: 220 IGSGGPETAGVRCLSFNPDGKTVLCGLQESLKIFSWE 256
Score = 137 (53.3 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 35/126 (27%), Positives = 59/126 (46%)
Query: 189 RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGK-SLVTAMSGHASWVL 247
RA L H V L RVL + +D V+++ A GK + + ++ GH+S +
Sbjct: 5 RAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLW-AIGKPNAILSLYGHSSGID 63
Query: 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDK 307
SV + G++ T+KLWDL ++++T H V F P G S S D
Sbjct: 64 SVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
Query: 308 SISLYE 313
++ +++
Sbjct: 124 NLKIWD 129
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 169 (64.5 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 39/143 (27%), Positives = 75/143 (52%)
Query: 171 RRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA 230
+R+ GS D T+ V+D+ + LH L GH VR + Y D R + S + D V ++D
Sbjct: 394 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDP 450
Query: 231 EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWG 290
E ++ + + GH + V S+ DG + +GS D ++++WD+ + ++T H G
Sbjct: 451 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 508
Query: 291 VSFRPLGGRVVSVSDDKSISLYE 313
+ + +VS + D ++ +++
Sbjct: 509 MELKD--NILVSGNADSTVKIWD 529
Score = 168 (64.2 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 41/148 (27%), Positives = 76/148 (51%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
DGRR+ G+ D + V+D LH L+GH V SL + + + S S DT + ++
Sbjct: 432 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH---VVSGSLDTSIRVW 488
Query: 229 DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSM---TNHT 285
D E + + ++GH S ++ + + +G++D TVK+WD+ +Q++ + H
Sbjct: 489 DVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQ 546
Query: 286 DQVWGVSFRPLGGRVVSVSDDKSISLYE 313
V + F V++ SDD ++ L++
Sbjct: 547 SAVTCLQFNK--NFVITSSDDGTVKLWD 572
Score = 157 (60.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 51/164 (31%), Positives = 78/164 (47%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++G+ D VK+W P+ T GH V S+ GI S SLD+ +RV+DV+T
Sbjct: 436 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG 493
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
I TL S M+ K L V+G ++VK+WD T + TL P T
Sbjct: 494 NCIHTLTGHQSLTSGMEL--KDNIL-VSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVT 550
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHL 196
+K FV++ S D DGT+ ++D+ +F+ +L
Sbjct: 551 CLQFNKNFVIT---SSD---------DGTVKLWDLKTGEFIRNL 582
Score = 136 (52.9 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 40/144 (27%), Positives = 66/144 (45%)
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
G RI GS D T+ V+ K L L GH V S S + ++ S S D + +++
Sbjct: 313 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS---SQMRDNIIISGSTDRTLKVWN 369
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
AE + + GH S V + + +GS D T+++WD+ + + H V
Sbjct: 370 AETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 427
Query: 290 GVSFRPLGGRVVSVSDDKSISLYE 313
V + G RVVS + D + +++
Sbjct: 428 CVQYD--GRRVVSGAYDFMVKVWD 449
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 33/110 (30%), Positives = 57/110 (51%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++GS D T+++W + Q GH V V ++ S + D V+V+D +T
Sbjct: 396 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV--SGAYDFMVKVWDPETE 453
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS 142
+ TL+ + V+ +QFD G + V+G S+++WD T N I TL+
Sbjct: 454 TCLHTLQGHTNRVYSLQFD--GIHV-VSGSLDTSIRVWDVETGNCIHTLT 500
Score = 126 (49.4 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 35/129 (27%), Positives = 62/129 (48%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H VW+ ++ R ++++GS D T+K+W + + T GH V + H
Sbjct: 342 HTGGVWS------SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 395
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
++ S S D+ +RV+D++T + L + V +Q+D + V+G VK+WD
Sbjct: 396 VV--SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDP 450
Query: 133 ATWNLIATL 141
T + TL
Sbjct: 451 ETETCLHTL 459
Score = 119 (46.9 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 37/108 (34%), Positives = 55/108 (50%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS-PVDPRVLFSASDDTHVHM 227
DG + GS+D +I V+DV +H L GH +SL + +L S + D+ V +
Sbjct: 472 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH----QSLTSGMELKDNILVSGNADSTVKI 527
Query: 228 YDAE-GKSLVTAM--SGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+D + G+ L T S H S V + + + + T S D TVKLWDL
Sbjct: 528 WDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDL 573
Score = 107 (42.7 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++GS D T+K+W + RT GH GV S + II S S D ++V++ +T
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII--SGSTDRTLKVWNAETG 373
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL 141
I TL S V M K V+G A++++WD T + L
Sbjct: 374 ECIHTLYGHTSTVRCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVL 419
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 221 (82.9 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 69/247 (27%), Positives = 111/247 (44%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL + S D T+KLW + RT GH V SVA P+G SAS D +++++V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS----IPRPE 147
+ T V ++ + GT +A +V++W AT A L +
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ-TVRVWVVATKECKAELREHEHVVECI 282
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRR---IACGSMDGTISVFDVTRAKFLHHLEGHFMPVR 204
P SS G+ + GS D TI ++DV+ L L GH VR
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR 342
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
+++ + + S +DD + ++D + K + ++ H +V S+D + TGS D
Sbjct: 343 GVLFHS-GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 265 RTVKLWD 271
+TVK+W+
Sbjct: 402 QTVKVWE 408
Score = 210 (79.0 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 77/292 (26%), Positives = 127/292 (43%)
Query: 43 KLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASP 102
K W P + + +GH V V HP + SAS D+ ++V+D +T TL+
Sbjct: 92 KEWIPRPPE-KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 103 SEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVL 162
V + FD G LA ++KLWD + I T+ G D + S
Sbjct: 151 DSVQDISFDHSGKLLASCSA-DMTIKLWDFQGFECIRTM-----HG---HDHNVS----- 196
Query: 163 SVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
SVA P+G I S D TI +++V + GH VR +V D ++ S S+D
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR-MVRPNQDGTLIASCSND 255
Query: 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPD--------------------GAAITTGS 262
V ++ K + H V + +P+ G + +GS
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
D+T+K+WD++ + ++ H + V GV F G ++S +DDK++ +++Y
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 216 LFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
L S S D + M+D G L+T + GH +WV V G I + + D+T+++WD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ M+++ H V + F VV+ S D+++ ++E
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 115 (45.5 bits), Expect = 0.00058, P = 0.00058
Identities = 36/125 (28%), Positives = 54/125 (43%)
Query: 12 AHEESVWAVTWVPATETRPA-----LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV 66
A E S +++ +ET+ + LL+GS D+T+K+W T GH V V
Sbjct: 285 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 344
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
H G S + D +RV+D + TL A V + F K V G +
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTAPYVVTGSVDQT 403
Query: 127 VKLWD 131
VK+W+
Sbjct: 404 VKVWE 408
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 221 (82.9 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 69/247 (27%), Positives = 111/247 (44%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL + S D T+KLW + RT GH V SVA P+G SAS D +++++V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS----IPRPE 147
+ T V ++ + GT +A +V++W AT A L +
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ-TVRVWVVATKECKAELREHEHVVECI 282
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRR---IACGSMDGTISVFDVTRAKFLHHLEGHFMPVR 204
P SS G+ + GS D TI ++DV+ L L GH VR
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR 342
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
+++ + + S +DD + ++D + K + ++ H +V S+D + TGS D
Sbjct: 343 GVLFHS-GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 265 RTVKLWD 271
+TVK+W+
Sbjct: 402 QTVKVWE 408
Score = 210 (79.0 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 77/292 (26%), Positives = 127/292 (43%)
Query: 43 KLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASP 102
K W P + + +GH V V HP + SAS D+ ++V+D +T TL+
Sbjct: 92 KEWIPRPPE-KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 103 SEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVL 162
V + FD G LA ++KLWD + I T+ G D + S
Sbjct: 151 DSVQDISFDHSGKLLASCSA-DMTIKLWDFQGFECIRTM-----HG---HDHNVS----- 196
Query: 163 SVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
SVA P+G I S D TI +++V + GH VR +V D ++ S S+D
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR-MVRPNQDGTLIASCSND 255
Query: 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPD--------------------GAAITTGS 262
V ++ K + H V + +P+ G + +GS
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
D+T+K+WD++ + ++ H + V GV F G ++S +DDK++ +++Y
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 216 LFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
L S S D + M+D G L+T + GH +WV V G I + + D+T+++WD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ M+++ H V + F VV+ S D+++ ++E
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 115 (45.5 bits), Expect = 0.00058, P = 0.00058
Identities = 36/125 (28%), Positives = 54/125 (43%)
Query: 12 AHEESVWAVTWVPATETRPA-----LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV 66
A E S +++ +ET+ + LL+GS D+T+K+W T GH V V
Sbjct: 285 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 344
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
H G S + D +RV+D + TL A V + F K V G +
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTAPYVVTGSVDQT 403
Query: 127 VKLWD 131
VK+W+
Sbjct: 404 VKVWE 408
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 221 (82.9 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 69/247 (27%), Positives = 111/247 (44%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL + S D T+KLW + RT GH V SVA P+G SAS D +++++V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS----IPRPE 147
+ T V ++ + GT +A +V++W AT A L +
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ-TVRVWVVATKECKAELREHEHVVECI 282
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRR---IACGSMDGTISVFDVTRAKFLHHLEGHFMPVR 204
P SS G+ + GS D TI ++DV+ L L GH VR
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR 342
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
+++ + + S +DD + ++D + K + ++ H +V S+D + TGS D
Sbjct: 343 GVLFHS-GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 265 RTVKLWD 271
+TVK+W+
Sbjct: 402 QTVKVWE 408
Score = 210 (79.0 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 77/292 (26%), Positives = 127/292 (43%)
Query: 43 KLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASP 102
K W P + + +GH V V HP + SAS D+ ++V+D +T TL+
Sbjct: 92 KEWIPRPPE-KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 103 SEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVL 162
V + FD G LA ++KLWD + I T+ G D + S
Sbjct: 151 DSVQDISFDHSGKLLASCSA-DMTIKLWDFQGFECIRTM-----HG---HDHNVS----- 196
Query: 163 SVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
SVA P+G I S D TI +++V + GH VR +V D ++ S S+D
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR-MVRPNQDGTLIASCSND 255
Query: 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPD--------------------GAAITTGS 262
V ++ K + H V + +P+ G + +GS
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
D+T+K+WD++ + ++ H + V GV F G ++S +DDK++ +++Y
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 216 LFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
L S S D + M+D G L+T + GH +WV V G I + + D+T+++WD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ M+++ H V + F VV+ S D+++ ++E
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 115 (45.5 bits), Expect = 0.00058, P = 0.00058
Identities = 36/125 (28%), Positives = 54/125 (43%)
Query: 12 AHEESVWAVTWVPATETRPA-----LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV 66
A E S +++ +ET+ + LL+GS D+T+K+W T GH V V
Sbjct: 285 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 344
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
H G S + D +RV+D + TL A V + F K V G +
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTAPYVVTGSVDQT 403
Query: 127 VKLWD 131
VK+W+
Sbjct: 404 VKVWE 408
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 221 (82.9 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 69/247 (27%), Positives = 111/247 (44%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL + S D T+KLW + RT GH V SVA P+G SAS D +++++V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS----IPRPE 147
+ T V ++ + GT +A +V++W AT A L +
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ-TVRVWVVATKECKAELREHEHVVECI 282
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRR---IACGSMDGTISVFDVTRAKFLHHLEGHFMPVR 204
P SS G+ + GS D TI ++DV+ L L GH VR
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR 342
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
+++ + + S +DD + ++D + K + ++ H +V S+D + TGS D
Sbjct: 343 GVLFHS-GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 265 RTVKLWD 271
+TVK+W+
Sbjct: 402 QTVKVWE 408
Score = 210 (79.0 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 77/292 (26%), Positives = 127/292 (43%)
Query: 43 KLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASP 102
K W P + + +GH V V HP + SAS D+ ++V+D +T TL+
Sbjct: 92 KEWIPRPPE-KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 103 SEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVL 162
V + FD G LA ++KLWD + I T+ G D + S
Sbjct: 151 DSVQDISFDHSGKLLASCSA-DMTIKLWDFQGFECIRTM-----HG---HDHNVS----- 196
Query: 163 SVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
SVA P+G I S D TI +++V + GH VR +V D ++ S S+D
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR-MVRPNQDGTLIASCSND 255
Query: 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPD--------------------GAAITTGS 262
V ++ K + H V + +P+ G + +GS
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
D+T+K+WD++ + ++ H + V GV F G ++S +DDK++ +++Y
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 216 LFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
L S S D + M+D G L+T + GH +WV V G I + + D+T+++WD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ M+++ H V + F VV+ S D+++ ++E
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 115 (45.5 bits), Expect = 0.00058, P = 0.00058
Identities = 36/125 (28%), Positives = 54/125 (43%)
Query: 12 AHEESVWAVTWVPATETRPA-----LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV 66
A E S +++ +ET+ + LL+GS D+T+K+W T GH V V
Sbjct: 285 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 344
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
H G S + D +RV+D + TL A V + F K V G +
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTAPYVVTGSVDQT 403
Query: 127 VKLWD 131
VK+W+
Sbjct: 404 VKVWE 408
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 221 (82.9 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 69/247 (27%), Positives = 111/247 (44%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL + S D T+KLW + RT GH V SVA P+G SAS D +++++V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS----IPRPE 147
+ T V ++ + GT +A +V++W AT A L +
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ-TVRVWVVATKECKAELREHEHVVECI 282
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRR---IACGSMDGTISVFDVTRAKFLHHLEGHFMPVR 204
P SS G+ + GS D TI ++DV+ L L GH VR
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR 342
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
+++ + + S +DD + ++D + K + ++ H +V S+D + TGS D
Sbjct: 343 GVLFHS-GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 265 RTVKLWD 271
+TVK+W+
Sbjct: 402 QTVKVWE 408
Score = 210 (79.0 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 77/292 (26%), Positives = 127/292 (43%)
Query: 43 KLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASP 102
K W P + + +GH V V HP + SAS D+ ++V+D +T TL+
Sbjct: 92 KEWIPRPPE-KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 103 SEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVL 162
V + FD G LA ++KLWD + I T+ G D + S
Sbjct: 151 DSVQDISFDHSGKLLASCSA-DMTIKLWDFQGFECIRTM-----HG---HDHNVS----- 196
Query: 163 SVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
SVA P+G I S D TI +++V + GH VR +V D ++ S S+D
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR-MVRPNQDGTLIASCSND 255
Query: 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPD--------------------GAAITTGS 262
V ++ K + H V + +P+ G + +GS
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
D+T+K+WD++ + ++ H + V GV F G ++S +DDK++ +++Y
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 216 LFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
L S S D + M+D G L+T + GH +WV V G I + + D+T+++WD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ M+++ H V + F VV+ S D+++ ++E
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 115 (45.5 bits), Expect = 0.00058, P = 0.00058
Identities = 36/125 (28%), Positives = 54/125 (43%)
Query: 12 AHEESVWAVTWVPATETRPA-----LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV 66
A E S +++ +ET+ + LL+GS D+T+K+W T GH V V
Sbjct: 285 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 344
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
H G S + D +RV+D + TL A V + F K V G +
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTAPYVVTGSVDQT 403
Query: 127 VKLWD 131
VK+W+
Sbjct: 404 VKVWE 408
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 221 (82.9 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 69/247 (27%), Positives = 111/247 (44%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL + S D T+KLW + RT GH V SVA P+G SAS D +++++V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS----IPRPE 147
+ T V ++ + GT +A +V++W AT A L +
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ-TVRVWVVATKECKAELREHEHVVECI 282
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRR---IACGSMDGTISVFDVTRAKFLHHLEGHFMPVR 204
P SS G+ + GS D TI ++DV+ L L GH VR
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR 342
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
+++ + + S +DD + ++D + K + ++ H +V S+D + TGS D
Sbjct: 343 GVLFHS-GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 265 RTVKLWD 271
+TVK+W+
Sbjct: 402 QTVKVWE 408
Score = 210 (79.0 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 77/292 (26%), Positives = 127/292 (43%)
Query: 43 KLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASP 102
K W P + + +GH V V HP + SAS D+ ++V+D +T TL+
Sbjct: 92 KEWIPRPPE-KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 103 SEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVL 162
V + FD G LA ++KLWD + I T+ G D + S
Sbjct: 151 DSVQDISFDHSGKLLASCSA-DMTIKLWDFQGFECIRTM-----HG---HDHNVS----- 196
Query: 163 SVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
SVA P+G I S D TI +++V + GH VR +V D ++ S S+D
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR-MVRPNQDGTLIASCSND 255
Query: 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPD--------------------GAAITTGS 262
V ++ K + H V + +P+ G + +GS
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
D+T+K+WD++ + ++ H + V GV F G ++S +DDK++ +++Y
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 216 LFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
L S S D + M+D G L+T + GH +WV V G I + + D+T+++WD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ M+++ H V + F VV+ S D+++ ++E
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 115 (45.5 bits), Expect = 0.00058, P = 0.00058
Identities = 36/125 (28%), Positives = 54/125 (43%)
Query: 12 AHEESVWAVTWVPATETRPA-----LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV 66
A E S +++ +ET+ + LL+GS D+T+K+W T GH V V
Sbjct: 285 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 344
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
H G S + D +RV+D + TL A V + F K V G +
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTAPYVVTGSVDQT 403
Query: 127 VKLWD 131
VK+W+
Sbjct: 404 VKVWE 408
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 221 (82.9 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 69/247 (27%), Positives = 111/247 (44%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL + S D T+KLW + RT GH V SVA P+G SAS D +++++V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS----IPRPE 147
+ T V ++ + GT +A +V++W AT A L +
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ-TVRVWVVATKECKAELREHEHVVECI 282
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRR---IACGSMDGTISVFDVTRAKFLHHLEGHFMPVR 204
P SS G+ + GS D TI ++DV+ L L GH VR
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR 342
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
+++ + + S +DD + ++D + K + ++ H +V S+D + TGS D
Sbjct: 343 GVLFHS-GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 265 RTVKLWD 271
+TVK+W+
Sbjct: 402 QTVKVWE 408
Score = 210 (79.0 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 77/292 (26%), Positives = 127/292 (43%)
Query: 43 KLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASP 102
K W P + + +GH V V HP + SAS D+ ++V+D +T TL+
Sbjct: 92 KEWIPRPPE-KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 103 SEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVL 162
V + FD G LA ++KLWD + I T+ G D + S
Sbjct: 151 DSVQDISFDHSGKLLASCSA-DMTIKLWDFQGFECIRTM-----HG---HDHNVS----- 196
Query: 163 SVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
SVA P+G I S D TI +++V + GH VR +V D ++ S S+D
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR-MVRPNQDGTLIASCSND 255
Query: 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPD--------------------GAAITTGS 262
V ++ K + H V + +P+ G + +GS
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
D+T+K+WD++ + ++ H + V GV F G ++S +DDK++ +++Y
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 216 LFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
L S S D + M+D G L+T + GH +WV V G I + + D+T+++WD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ M+++ H V + F VV+ S D+++ ++E
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 115 (45.5 bits), Expect = 0.00058, P = 0.00058
Identities = 36/125 (28%), Positives = 54/125 (43%)
Query: 12 AHEESVWAVTWVPATETRPA-----LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV 66
A E S +++ +ET+ + LL+GS D+T+K+W T GH V V
Sbjct: 285 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 344
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
H G S + D +RV+D + TL A V + F K V G +
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTAPYVVTGSVDQT 403
Query: 127 VKLWD 131
VK+W+
Sbjct: 404 VKVWE 408
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 221 (82.9 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 69/247 (27%), Positives = 111/247 (44%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL + S D T+KLW + RT GH V SVA P+G SAS D +++++V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS----IPRPE 147
+ T V ++ + GT +A +V++W AT A L +
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ-TVRVWVVATKECKAELREHEHVVECI 282
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRR---IACGSMDGTISVFDVTRAKFLHHLEGHFMPVR 204
P SS G+ + GS D TI ++DV+ L L GH VR
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR 342
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
+++ + + S +DD + ++D + K + ++ H +V S+D + TGS D
Sbjct: 343 GVLFHS-GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 265 RTVKLWD 271
+TVK+W+
Sbjct: 402 QTVKVWE 408
Score = 210 (79.0 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 77/292 (26%), Positives = 127/292 (43%)
Query: 43 KLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASP 102
K W P + + +GH V V HP + SAS D+ ++V+D +T TL+
Sbjct: 92 KEWIPRPPE-KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 103 SEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVL 162
V + FD G LA ++KLWD + I T+ G D + S
Sbjct: 151 DSVQDISFDHSGKLLASCSA-DMTIKLWDFQGFECIRTM-----HG---HDHNVS----- 196
Query: 163 SVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
SVA P+G I S D TI +++V + GH VR +V D ++ S S+D
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR-MVRPNQDGTLIASCSND 255
Query: 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPD--------------------GAAITTGS 262
V ++ K + H V + +P+ G + +GS
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
D+T+K+WD++ + ++ H + V GV F G ++S +DDK++ +++Y
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 216 LFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
L S S D + M+D G L+T + GH +WV V G I + + D+T+++WD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ M+++ H V + F VV+ S D+++ ++E
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 115 (45.5 bits), Expect = 0.00058, P = 0.00058
Identities = 36/125 (28%), Positives = 54/125 (43%)
Query: 12 AHEESVWAVTWVPATETRPA-----LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV 66
A E S +++ +ET+ + LL+GS D+T+K+W T GH V V
Sbjct: 285 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 344
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
H G S + D +RV+D + TL A V + F K V G +
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTAPYVVTGSVDQT 403
Query: 127 VKLWD 131
VK+W+
Sbjct: 404 VKVWE 408
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 221 (82.9 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 69/247 (27%), Positives = 111/247 (44%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL + S D T+KLW + RT GH V SVA P+G SAS D +++++V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS----IPRPE 147
+ T V ++ + GT +A +V++W AT A L +
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ-TVRVWVVATKECKAELREHEHVVECI 282
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRR---IACGSMDGTISVFDVTRAKFLHHLEGHFMPVR 204
P SS G+ + GS D TI ++DV+ L L GH VR
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR 342
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
+++ + + S +DD + ++D + K + ++ H +V S+D + TGS D
Sbjct: 343 GVLFHS-GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 265 RTVKLWD 271
+TVK+W+
Sbjct: 402 QTVKVWE 408
Score = 209 (78.6 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 77/292 (26%), Positives = 127/292 (43%)
Query: 43 KLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASP 102
K W P + + +GH V V HP + SAS D+ ++V+D +T TL+
Sbjct: 92 KEWIPRPPE-KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 103 SEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVL 162
V + FD G LA ++KLWD + I T+ G D + S
Sbjct: 151 DSVEDISFDHSGKLLASCSA-DMTIKLWDFQGFECIRTM-----HG---HDHNVS----- 196
Query: 163 SVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
SVA P+G I S D TI +++V + GH VR +V D ++ S S+D
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR-MVRPNQDGTLIASCSND 255
Query: 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPD--------------------GAAITTGS 262
V ++ K + H V + +P+ G + +GS
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
D+T+K+WD++ + ++ H + V GV F G ++S +DDK++ +++Y
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 216 LFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
L S S D + M+D G L+T + GH +WV V G I + + D+T+++WD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ M+++ H V + F VV+ S D+++ ++E
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 115 (45.5 bits), Expect = 0.00058, P = 0.00058
Identities = 36/125 (28%), Positives = 54/125 (43%)
Query: 12 AHEESVWAVTWVPATETRPA-----LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV 66
A E S +++ +ET+ + LL+GS D+T+K+W T GH V V
Sbjct: 285 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 344
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
H G S + D +RV+D + TL A V + F K V G +
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTAPYVVTGSVDQT 403
Query: 127 VKLWD 131
VK+W+
Sbjct: 404 VKVWE 408
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 169 (64.5 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 39/143 (27%), Positives = 75/143 (52%)
Query: 171 RRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA 230
+R+ GS D T+ V+D+ + LH L GH VR + Y D R + S + D V ++D
Sbjct: 394 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDP 450
Query: 231 EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWG 290
E ++ + + GH + V S+ DG + +GS D ++++WD+ + ++T H G
Sbjct: 451 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 508
Query: 291 VSFRPLGGRVVSVSDDKSISLYE 313
+ + +VS + D ++ +++
Sbjct: 509 MELKD--NILVSGNADSTVKIWD 529
Score = 168 (64.2 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 41/148 (27%), Positives = 76/148 (51%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
DGRR+ G+ D + V+D LH L+GH V SL + + + S S DT + ++
Sbjct: 432 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH---VVSGSLDTSIRVW 488
Query: 229 DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSM---TNHT 285
D E + + ++GH S ++ + + +G++D TVK+WD+ +Q++ + H
Sbjct: 489 DVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQ 546
Query: 286 DQVWGVSFRPLGGRVVSVSDDKSISLYE 313
V + F V++ SDD ++ L++
Sbjct: 547 SAVTCLQFNK--NFVITSSDDGTVKLWD 572
Score = 157 (60.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 51/164 (31%), Positives = 78/164 (47%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++G+ D VK+W P+ T GH V S+ GI S SLD+ +RV+DV+T
Sbjct: 436 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG 493
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
I TL S M+ K L V+G ++VK+WD T + TL P T
Sbjct: 494 NCIHTLTGHQSLTSGMEL--KDNIL-VSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVT 550
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHL 196
+K FV++ S D DGT+ ++D+ +F+ +L
Sbjct: 551 CLQFNKNFVIT---SSD---------DGTVKLWDLKTGEFIRNL 582
Score = 136 (52.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 40/144 (27%), Positives = 66/144 (45%)
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
G RI GS D T+ V+ K L L GH V S S + ++ S S D + +++
Sbjct: 313 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS---SQMRDNIIISGSTDRTLKVWN 369
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
AE + + GH S V + + +GS D T+++WD+ + + H V
Sbjct: 370 AETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 427
Query: 290 GVSFRPLGGRVVSVSDDKSISLYE 313
V + G RVVS + D + +++
Sbjct: 428 CVQYD--GRRVVSGAYDFMVKVWD 449
Score = 129 (50.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 33/110 (30%), Positives = 57/110 (51%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++GS D T+++W + Q GH V V ++ S + D V+V+D +T
Sbjct: 396 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV--SGAYDFMVKVWDPETE 453
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS 142
+ TL+ + V+ +QFD G + V+G S+++WD T N I TL+
Sbjct: 454 TCLHTLQGHTNRVYSLQFD--GIHV-VSGSLDTSIRVWDVETGNCIHTLT 500
Score = 126 (49.4 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 35/129 (27%), Positives = 62/129 (48%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H VW+ ++ R ++++GS D T+K+W + + T GH V + H
Sbjct: 342 HTGGVWS------SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 395
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
++ S S D+ +RV+D++T + L + V +Q+D + V+G VK+WD
Sbjct: 396 VV--SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDP 450
Query: 133 ATWNLIATL 141
T + TL
Sbjct: 451 ETETCLHTL 459
Score = 119 (46.9 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 37/108 (34%), Positives = 55/108 (50%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS-PVDPRVLFSASDDTHVHM 227
DG + GS+D +I V+DV +H L GH +SL + +L S + D+ V +
Sbjct: 472 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH----QSLTSGMELKDNILVSGNADSTVKI 527
Query: 228 YDAE-GKSLVTAM--SGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+D + G+ L T S H S V + + + + T S D TVKLWDL
Sbjct: 528 WDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDL 573
Score = 107 (42.7 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++GS D T+K+W + RT GH GV S + II S S D ++V++ +T
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII--SGSTDRTLKVWNAETG 373
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL 141
I TL S V M K V+G A++++WD T + L
Sbjct: 374 ECIHTLYGHTSTVRCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVL 419
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 169 (64.5 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 39/143 (27%), Positives = 75/143 (52%)
Query: 171 RRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA 230
+R+ GS D T+ V+D+ + LH L GH VR + Y D R + S + D V ++D
Sbjct: 352 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDP 408
Query: 231 EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWG 290
E ++ + + GH + V S+ DG + +GS D ++++WD+ + ++T H G
Sbjct: 409 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 466
Query: 291 VSFRPLGGRVVSVSDDKSISLYE 313
+ + +VS + D ++ +++
Sbjct: 467 MELKD--NILVSGNADSTVKIWD 487
Score = 167 (63.8 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 41/148 (27%), Positives = 75/148 (50%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
DGRR+ G+ D + V+D LH L+GH V SL + + + S S DT + ++
Sbjct: 390 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH---VVSGSLDTSIRVW 446
Query: 229 DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSM---TNHT 285
D E + + ++GH S ++ + + +G++D TVK+WD+ +Q++ H
Sbjct: 447 DVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ 504
Query: 286 DQVWGVSFRPLGGRVVSVSDDKSISLYE 313
V + F V++ SDD ++ L++
Sbjct: 505 SAVTCLQFNK--NFVITSSDDGTVKLWD 530
Score = 158 (60.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 51/164 (31%), Positives = 78/164 (47%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++G+ D VK+W P+ T GH V S+ GI S SLD+ +RV+DV+T
Sbjct: 394 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG 451
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
I TL S M+ K L V+G ++VK+WD T + TL P T
Sbjct: 452 NCIHTLTGHQSLTSGMEL--KDNIL-VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT 508
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHL 196
+K FV++ S D DGT+ ++D+ +F+ +L
Sbjct: 509 CLQFNKNFVIT---SSD---------DGTVKLWDLKTGEFIRNL 540
Score = 136 (52.9 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 40/144 (27%), Positives = 66/144 (45%)
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
G RI GS D T+ V+ K L L GH V S S + ++ S S D + +++
Sbjct: 271 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS---SQMRDNIIISGSTDRTLKVWN 327
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
AE + + GH S V + + +GS D T+++WD+ + + H V
Sbjct: 328 AETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 385
Query: 290 GVSFRPLGGRVVSVSDDKSISLYE 313
V + G RVVS + D + +++
Sbjct: 386 CVQYD--GRRVVSGAYDFMVKVWD 407
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 33/110 (30%), Positives = 57/110 (51%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++GS D T+++W + Q GH V V ++ S + D V+V+D +T
Sbjct: 354 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV--SGAYDFMVKVWDPETE 411
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS 142
+ TL+ + V+ +QFD G + V+G S+++WD T N I TL+
Sbjct: 412 TCLHTLQGHTNRVYSLQFD--GIHV-VSGSLDTSIRVWDVETGNCIHTLT 458
Score = 126 (49.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 35/129 (27%), Positives = 62/129 (48%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H VW+ ++ R ++++GS D T+K+W + + T GH V + H
Sbjct: 300 HTGGVWS------SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 353
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
++ S S D+ +RV+D++T + L + V +Q+D + V+G VK+WD
Sbjct: 354 VV--SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDP 408
Query: 133 ATWNLIATL 141
T + TL
Sbjct: 409 ETETCLHTL 417
Score = 116 (45.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 36/108 (33%), Positives = 55/108 (50%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS-PVDPRVLFSASDDTHVHM 227
DG + GS+D +I V+DV +H L GH +SL + +L S + D+ V +
Sbjct: 430 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH----QSLTSGMELKDNILVSGNADSTVKI 485
Query: 228 YDAE-GKSLVTAM--SGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+D + G+ L T + H S V + + + + T S D TVKLWDL
Sbjct: 486 WDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDL 531
Score = 107 (42.7 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++GS D T+K+W + RT GH GV S + II S S D ++V++ +T
Sbjct: 274 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII--SGSTDRTLKVWNAETG 331
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL 141
I TL S V M K V+G A++++WD T + L
Sbjct: 332 ECIHTLYGHTSTVRCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVL 377
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 160 (61.4 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 47/150 (31%), Positives = 75/150 (50%)
Query: 166 WSPD--GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 223
WS G I GS D T+ V+D+ +H L+GH VR + +V+ S S D
Sbjct: 1039 WSSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLH--GSKVV-SGSRDA 1095
Query: 224 HVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN 283
+ ++D E S + + GH + V V DG I +G+ D VK+W + + ++
Sbjct: 1096 TLRVWDIEQGSCLHVLVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHTLQG 1153
Query: 284 HTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
HT++V+ + F L VVS S D SI +++
Sbjct: 1154 HTNRVYSLQFDGL--HVVSGSLDTSIRVWD 1181
Score = 160 (61.4 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 49/165 (29%), Positives = 78/165 (47%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
L+++G+ D VK+W P+ + T GH V S+ G+ S SLD+ +RV+DV+T
Sbjct: 1127 LIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVET 1184
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
TL S M+ + V+G ++VK+WD T + TLS P
Sbjct: 1185 GNCKHTLMGHQSLTSGMELRQN---ILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAV 1241
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHL 196
T + +FV++ S D DGT+ ++DV F+ +L
Sbjct: 1242 TCLQFNSRFVVT---SSD---------DGTVKLWDVKTGDFIRNL 1274
Score = 159 (61.0 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 37/144 (25%), Positives = 72/144 (50%)
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
G ++ GS D T+ V+D+ + LH L GH VR + Y D +++ S + D V ++
Sbjct: 1085 GSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQY---DGKLIVSGAYDYMVKIWH 1141
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
E + + + GH + V S+ DG + +GS D ++++WD+ ++ H
Sbjct: 1142 PERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTS 1199
Query: 290 GVSFRPLGGRVVSVSDDKSISLYE 313
G+ R +VS + D ++ +++
Sbjct: 1200 GMELRQ--NILVSGNADSTVKVWD 1221
Score = 153 (58.9 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 40/146 (27%), Positives = 73/146 (50%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
DG+ I G+ D + ++ R + LH L+GH V SL + D + S S DT + ++
Sbjct: 1124 DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQF---DGLHVVSGSLDTSIRVW 1180
Query: 229 DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQV 288
D E + + GH S ++ + + +G++D TVK+WD+ +Q+++
Sbjct: 1181 DVETGNCKHTLMGHQSLTSGMELRQN--ILVSGNADSTVKVWDITTGQCLQTLSGPNKHH 1238
Query: 289 WGVSFRPLGGR-VVSVSDDKSISLYE 313
V+ R VV+ SDD ++ L++
Sbjct: 1239 SAVTCLQFNSRFVVTSSDDGTVKLWD 1264
Score = 145 (56.1 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 39/143 (27%), Positives = 67/143 (46%)
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
G RI GS D T+ V+ K L L GH V S S + ++ S S D + ++D
Sbjct: 1005 GNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWS---SQMSGNIIISGSTDRTLKVWD 1061
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
+ + V + GH S V + G+ + +GS D T+++WD+ + + + H V
Sbjct: 1062 MDSGACVHTLQGHTSTVRCMHLH--GSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVR 1119
Query: 290 GVSFRPLGGRVVSVSDDKSISLY 312
V + G +VS + D + ++
Sbjct: 1120 CVQYD--GKLIVSGAYDYMVKIW 1140
Score = 127 (49.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 34/99 (34%), Positives = 55/99 (55%)
Query: 216 LFSASDDTHVHMYDA-EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
+ S SDD + ++ A GK L T + GH V S S G I +GS+DRT+K+WD++
Sbjct: 1008 IVSGSDDNTLKVWSAVNGKCLRTLV-GHTGGVWSSQMS--GNIIISGSTDRTLKVWDMDS 1064
Query: 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
A + ++ HT V + G +VVS S D ++ +++
Sbjct: 1065 GACVHTLQGHTSTVRCMHLH--GSKVVSGSRDATLRVWD 1101
Score = 125 (49.1 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 34/99 (34%), Positives = 56/99 (56%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++GS D T+K+W + + RT GH GV S + SG I S S D ++V+D+D+
Sbjct: 1008 IVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWS--SQMSGNIIISGSTDRTLKVWDMDSG 1065
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWD 131
A + TL+ S V M G+ + V+G A++++WD
Sbjct: 1066 ACVHTLQGHTSTVRCMHLH--GSKV-VSGSRDATLRVWD 1101
Score = 116 (45.9 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
++++GS D T+K+W D T GH V + H S ++ S S D+ +RV+D++
Sbjct: 1047 IIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVV--SGSRDATLRVWDIEQ 1104
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL 141
+ + L + V +Q+D K L V+G VK+W + TL
Sbjct: 1105 GSCLHVLVGHLAAVRCVQYDGK---LIVSGAYDYMVKIWHPERQECLHTL 1151
Score = 110 (43.8 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 39/110 (35%), Positives = 57/110 (51%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPR--VLFSASDDTHVH 226
DG + GS+D +I V+DV H L GH +SL S ++ R +L S + D+ V
Sbjct: 1164 DGLHVVSGSLDTSIRVWDVETGNCKHTLMGH----QSLT-SGMELRQNILVSGNADSTVK 1218
Query: 227 MYD-AEGKSLVTAMSG---HASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
++D G+ L T +SG H S V + + + T S D TVKLWD+
Sbjct: 1219 VWDITTGQCLQT-LSGPNKHHSAVTCLQFN--SRFVVTSSDDGTVKLWDV 1265
Score = 108 (43.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 29/109 (26%), Positives = 53/109 (48%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++GS D T+++W + GH L V + G + S + D V+++ +
Sbjct: 1088 VVSGSRDATLRVWDIEQGSCLHVLVGH-LAAVRCVQY-DGKLIVSGAYDYMVKIWHPERQ 1145
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL 141
+ TL+ + V+ +QFD G + V+G S+++WD T N TL
Sbjct: 1146 ECLHTLQGHTNRVYSLQFD--GLHV-VSGSLDTSIRVWDVETGNCKHTL 1191
Score = 73 (30.8 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 28/102 (27%), Positives = 49/102 (48%)
Query: 173 IACGSMDGTISVFDVTRAKFLHHLEG---HFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
+ G+ D T+ V+D+T + L L G H V L ++ R + ++SDD V ++D
Sbjct: 1208 LVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNS---RFVVTSSDDGTVKLWD 1264
Query: 230 AE-G---KSLVTAMSGHASWVL-SVDASPDGAAITTGSSDRT 266
+ G ++LV SG + V+ + A+ GS + T
Sbjct: 1265 VKTGDFIRNLVALDSGGSGGVVWRIRANDTKLICAVGSRNGT 1306
Score = 69 (29.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 23/97 (23%), Positives = 41/97 (42%)
Query: 45 WRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSE 104
WR ++ + GH V++ SG S S D+ ++V+ + TL
Sbjct: 979 WRSRPVRKPKVLKGHDDHVITCLQF-SGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGG 1037
Query: 105 VWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL 141
VW Q G + ++G ++K+WD + + TL
Sbjct: 1038 VWSSQMS--GNII-ISGSTDRTLKVWDMDSGACVHTL 1071
Score = 49 (22.3 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 54 RTNTGHCLGVVSVAAHPSGIIAASASLDS 82
+ N G LG S + H SG + S S++S
Sbjct: 455 KLNLGSSLGASSCSQHRSGSSSTSKSMES 483
Score = 42 (19.8 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 80 LDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGG 122
LD F++ ++ S+ T + S V + D +T + GG
Sbjct: 91 LDDESSTFEISSSNSLPTSAGAASTVGVVAVDDSSSTDTLNGG 133
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 169 (64.5 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 39/143 (27%), Positives = 75/143 (52%)
Query: 171 RRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA 230
+R+ GS D T+ V+D+ + LH L GH VR + Y D R + S + D V ++D
Sbjct: 392 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDP 448
Query: 231 EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWG 290
E ++ + + GH + V S+ DG + +GS D ++++WD+ + ++T H G
Sbjct: 449 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 506
Query: 291 VSFRPLGGRVVSVSDDKSISLYE 313
+ + +VS + D ++ +++
Sbjct: 507 MELKD--NILVSGNADSTVKIWD 527
Score = 167 (63.8 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 41/148 (27%), Positives = 75/148 (50%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
DGRR+ G+ D + V+D LH L+GH V SL + + + S S DT + ++
Sbjct: 430 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH---VVSGSLDTSIRVW 486
Query: 229 DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSM---TNHT 285
D E + + ++GH S ++ + + +G++D TVK+WD+ +Q++ H
Sbjct: 487 DVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ 544
Query: 286 DQVWGVSFRPLGGRVVSVSDDKSISLYE 313
V + F V++ SDD ++ L++
Sbjct: 545 SAVTCLQFNK--NFVITSSDDGTVKLWD 570
Score = 158 (60.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 51/164 (31%), Positives = 78/164 (47%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++G+ D VK+W P+ T GH V S+ GI S SLD+ +RV+DV+T
Sbjct: 434 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG 491
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
I TL S M+ K L V+G ++VK+WD T + TL P T
Sbjct: 492 NCIHTLTGHQSLTSGMEL--KDNIL-VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT 548
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHL 196
+K FV++ S D DGT+ ++D+ +F+ +L
Sbjct: 549 CLQFNKNFVIT---SSD---------DGTVKLWDLKTGEFIRNL 580
Score = 136 (52.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 40/144 (27%), Positives = 66/144 (45%)
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
G RI GS D T+ V+ K L L GH V S S + ++ S S D + +++
Sbjct: 311 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS---SQMRDNIIISGSTDRTLKVWN 367
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
AE + + GH S V + + +GS D T+++WD+ + + H V
Sbjct: 368 AETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 425
Query: 290 GVSFRPLGGRVVSVSDDKSISLYE 313
V + G RVVS + D + +++
Sbjct: 426 CVQYD--GRRVVSGAYDFMVKVWD 447
Score = 129 (50.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 33/110 (30%), Positives = 57/110 (51%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++GS D T+++W + Q GH V V ++ S + D V+V+D +T
Sbjct: 394 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV--SGAYDFMVKVWDPETE 451
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS 142
+ TL+ + V+ +QFD G + V+G S+++WD T N I TL+
Sbjct: 452 TCLHTLQGHTNRVYSLQFD--GIHV-VSGSLDTSIRVWDVETGNCIHTLT 498
Score = 126 (49.4 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 35/129 (27%), Positives = 62/129 (48%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H VW+ ++ R ++++GS D T+K+W + + T GH V + H
Sbjct: 340 HTGGVWS------SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 393
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
++ S S D+ +RV+D++T + L + V +Q+D + V+G VK+WD
Sbjct: 394 VV--SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDP 448
Query: 133 ATWNLIATL 141
T + TL
Sbjct: 449 ETETCLHTL 457
Score = 116 (45.9 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 36/108 (33%), Positives = 55/108 (50%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS-PVDPRVLFSASDDTHVHM 227
DG + GS+D +I V+DV +H L GH +SL + +L S + D+ V +
Sbjct: 470 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH----QSLTSGMELKDNILVSGNADSTVKI 525
Query: 228 YDAE-GKSLVTAM--SGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+D + G+ L T + H S V + + + + T S D TVKLWDL
Sbjct: 526 WDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDL 571
Score = 107 (42.7 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++GS D T+K+W + RT GH GV S + II S S D ++V++ +T
Sbjct: 314 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII--SGSTDRTLKVWNAETG 371
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL 141
I TL S V M K V+G A++++WD T + L
Sbjct: 372 ECIHTLYGHTSTVRCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVL 417
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 203 (76.5 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 64/203 (31%), Positives = 85/203 (41%)
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
A++ + A S V + L GG V LW N I +L T
Sbjct: 15 AAVEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL----------T 64
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
+S V SV + I GS G+I V+D+ AK L L GH + SL + P
Sbjct: 65 GHTSP---VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 121
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
V S S DT++ ++D K V GH+ V + SPDG + + + D TVKLWDL
Sbjct: 122 EFVA-SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 180
Query: 273 NMRAAMQSMTNHTDQVWGVSFRP 295
M HT V V F P
Sbjct: 181 TAGKMMSEFPGHTGPVNVVEFHP 203
Score = 182 (69.1 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 36/144 (25%), Positives = 73/144 (50%)
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
GR +A G D ++++ + + + L GH PV S+ + + ++ + S + ++D
Sbjct: 37 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE-ELIVAGSQSGSIRVWD 95
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
E ++ + GH + + S+D P G + +GS D +KLWD+ + + H+ V
Sbjct: 96 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 155
Query: 290 GVSFRPLGGRVVSVSDDKSISLYE 313
+ F P G + S +DD ++ L++
Sbjct: 156 CLRFSPDGKWLASAADDHTVKLWD 179
Score = 161 (61.7 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 58/210 (27%), Positives = 96/210 (45%)
Query: 4 AGLKSVEN--AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCL 61
A + +VE AH +V ++ A+ LL TG D V LW + + TGH
Sbjct: 12 AAVAAVEEIVAHASNVSSLVLGKASGR---LLATGGDDCRVNLWSINKPNCIMSLTGHTS 68
Query: 62 GVVSVAAH-PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVA 120
V SV + P +I A + S +RV+D++ + TL + + + F P G +A +
Sbjct: 69 PVESVRLNTPEELIVAGSQSGS-IRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA-S 126
Query: 121 GGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG 180
G ++KLWD R +G + S+ V + +SPDG+ +A + D
Sbjct: 127 GSQDTNIKLWDI------------RRKGCVFRYRGHSQA-VRCLRFSPDGKWLASAADDH 173
Query: 181 TISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
T+ ++D+T K + GH PV + + P
Sbjct: 174 TVKLWDLTAGKMMSEFPGHTGPVNVVEFHP 203
Score = 160 (61.4 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 54/197 (27%), Positives = 87/197 (44%)
Query: 59 HCLGVVS-VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
H V S V SG + A+ D V ++ ++ I +L S V ++ + L
Sbjct: 23 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTP-EEL 81
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS 177
VAG S S+++WD ++ TL K + S+ + P G +A GS
Sbjct: 82 IVAGSQSGSIRVWDLEAAKILRTLM-------------GHKANICSLDFHPYGEFVASGS 128
Query: 178 MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT 237
D I ++D+ R + GH VR L +SP D + L SA+DD V ++D +++
Sbjct: 129 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMS 187
Query: 238 AMSGHASWVLSVDASPD 254
GH V V+ P+
Sbjct: 188 EFPGHTGPVNVVEFHPN 204
Score = 149 (57.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 32/121 (26%), Positives = 58/121 (47%)
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS 252
+ + H V SLV R+L + DD V+++ + + +++GH S V SV +
Sbjct: 17 VEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 76
Query: 253 PDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
I GS ++++WDL ++++ H + + F P G V S S D +I L+
Sbjct: 77 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 136
Query: 313 E 313
+
Sbjct: 137 D 137
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 154 (59.3 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 60/202 (29%), Positives = 89/202 (44%)
Query: 115 TTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIA 174
+TL V+G +VKLW + I P V SV D +
Sbjct: 363 STLLVSGSADCTVKLWHFSGGKRITLRGHTGP--------------VNSVRIIRDRGLVL 408
Query: 175 CGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKS 234
GS D TI ++ + LH H PV+SL + D R LFS S D + +D E K
Sbjct: 409 SGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALA--DSR-LFSCSLDGTIKQWDIEKKK 465
Query: 235 LVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFR 294
V + GH V + A D + +G+ D VK+W+ + ++ NH++ V V+
Sbjct: 466 CVHTLFGHIEGVWEIAA--DHLRLISGAHDGVVKVWEAC--ECVHTLKNHSEPVTSVA-- 519
Query: 295 PLGG-RVVSVSDDKSISLYEYS 315
LG VVS S+D I L+ ++
Sbjct: 520 -LGDCEVVSGSEDGKIYLWLFN 540
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 40/145 (27%), Positives = 67/145 (46%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
D ++ GSMD TI +++ ++ + L GH V L + D +L S S D V ++
Sbjct: 322 DQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTF---DSTLLVSGSADCTVKLW 378
Query: 229 DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQV 288
G +T + GH V SV D + +GS D T+K+W L + + + H V
Sbjct: 379 HFSGGKRIT-LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPV 437
Query: 289 WGVSFRPLGGRVVSVSDDKSISLYE 313
++ R+ S S D +I ++
Sbjct: 438 QSLALAD--SRLFSCSLDGTIKQWD 460
Score = 134 (52.2 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 41/140 (29%), Positives = 68/140 (48%)
Query: 173 IACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG 232
+A GS D TI ++++ + + LEGH V L + D L S S D + +++
Sbjct: 286 LASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF---DQCKLISGSMDKTIRIWNYRT 342
Query: 233 KSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVS 292
++ + GH VL + D + +GS+D TVKLW + + ++ HT V V
Sbjct: 343 SECISILHGHTDSVLCLTF--DSTLLVSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSVR 399
Query: 293 FRPLGGRVVSVSDDKSISLY 312
G V+S SDD +I ++
Sbjct: 400 IIRDRGLVLSGSDDSTIKIW 419
Score = 131 (51.2 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 39/145 (26%), Positives = 70/145 (48%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
D + GS D T+ ++ + K + L GH PV S V D ++ S SDD+ + ++
Sbjct: 362 DSTLLVSGSADCTVKLWHFSGGKRIT-LRGHTGPVNS-VRIIRDRGLVLSGSDDSTIKIW 419
Query: 229 DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQV 288
E + + S H V S+ A D + S D T+K WD+ + + ++ H + V
Sbjct: 420 SLETNTCLHTFSAHIGPVQSL-ALADSRLFSC-SLDGTIKQWDIEKKKCVHTLFGHIEGV 477
Query: 289 WGVSFRPLGGRVVSVSDDKSISLYE 313
W ++ L R++S + D + ++E
Sbjct: 478 WEIAADHL--RLISGAHDGVVKVWE 500
Score = 120 (47.3 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 31/99 (31%), Positives = 48/99 (48%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
+L +GS D T++LW Q GH GV + +I S S+D +R+++ T
Sbjct: 285 ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCKLI--SGSMDKTIRIWNYRT 342
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLW 130
+ I+ L V + FD +TL V+G +VKLW
Sbjct: 343 SECISILHGHTDSVLCLTFD---STLLVSGSADCTVKLW 378
Score = 82 (33.9 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 26/92 (28%), Positives = 45/92 (48%)
Query: 58 GHCLGVVSVAAHPSGI--------IAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQ 109
G C VV ++ H G+ I AS S D+ +R++++ T +A LE S V +Q
Sbjct: 262 GRCRQVV-LSGHSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQ 320
Query: 110 FDPKGTTLAVAGGGSASVKLWDTATWNLIATL 141
FD ++G ++++W+ T I+ L
Sbjct: 321 FDQ---CKLISGSMDKTIRIWNYRTSECISIL 349
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 39/143 (27%), Positives = 75/143 (52%)
Query: 171 RRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA 230
+R+ GS D T+ V+D+ + LH L GH VR + Y D R + S + D V ++D
Sbjct: 472 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDP 528
Query: 231 EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWG 290
E ++ + + GH + V S+ DG + +GS D ++++WD+ + ++T H G
Sbjct: 529 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 586
Query: 291 VSFRPLGGRVVSVSDDKSISLYE 313
+ + +VS + D ++ +++
Sbjct: 587 MELKD--NILVSGNADSTVKIWD 607
Score = 167 (63.8 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 41/148 (27%), Positives = 75/148 (50%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
DGRR+ G+ D + V+D LH L+GH V SL + + + S S DT + ++
Sbjct: 510 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH---VVSGSLDTSIRVW 566
Query: 229 DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSM---TNHT 285
D E + + ++GH S ++ + + +G++D TVK+WD+ +Q++ H
Sbjct: 567 DVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ 624
Query: 286 DQVWGVSFRPLGGRVVSVSDDKSISLYE 313
V + F V++ SDD ++ L++
Sbjct: 625 SAVTCLQFNK--NFVITSSDDGTVKLWD 650
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 51/164 (31%), Positives = 78/164 (47%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++G+ D VK+W P+ T GH V S+ GI S SLD+ +RV+DV+T
Sbjct: 514 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG 571
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
I TL S M+ K L V+G ++VK+WD T + TL P T
Sbjct: 572 NCIHTLTGHQSLTSGMEL--KDNIL-VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT 628
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHL 196
+K FV++ S D DGT+ ++D+ +F+ +L
Sbjct: 629 CLQFNKNFVIT---SSD---------DGTVKLWDLKTGEFIRNL 660
Score = 136 (52.9 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 40/144 (27%), Positives = 66/144 (45%)
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
G RI GS D T+ V+ K L L GH V S S + ++ S S D + +++
Sbjct: 391 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS---SQMRDNIIISGSTDRTLKVWN 447
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
AE + + GH S V + + +GS D T+++WD+ + + H V
Sbjct: 448 AETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 505
Query: 290 GVSFRPLGGRVVSVSDDKSISLYE 313
V + G RVVS + D + +++
Sbjct: 506 CVQYD--GRRVVSGAYDFMVKVWD 527
Score = 129 (50.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 33/110 (30%), Positives = 57/110 (51%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++GS D T+++W + Q GH V V ++ S + D V+V+D +T
Sbjct: 474 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV--SGAYDFMVKVWDPETE 531
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS 142
+ TL+ + V+ +QFD G + V+G S+++WD T N I TL+
Sbjct: 532 TCLHTLQGHTNRVYSLQFD--GIHV-VSGSLDTSIRVWDVETGNCIHTLT 578
Score = 126 (49.4 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 35/129 (27%), Positives = 62/129 (48%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H VW+ ++ R ++++GS D T+K+W + + T GH V + H
Sbjct: 420 HTGGVWS------SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 473
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
++ S S D+ +RV+D++T + L + V +Q+D + V+G VK+WD
Sbjct: 474 VV--SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDP 528
Query: 133 ATWNLIATL 141
T + TL
Sbjct: 529 ETETCLHTL 537
Score = 116 (45.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 36/108 (33%), Positives = 55/108 (50%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS-PVDPRVLFSASDDTHVHM 227
DG + GS+D +I V+DV +H L GH +SL + +L S + D+ V +
Sbjct: 550 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH----QSLTSGMELKDNILVSGNADSTVKI 605
Query: 228 YDAE-GKSLVTAM--SGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+D + G+ L T + H S V + + + + T S D TVKLWDL
Sbjct: 606 WDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDL 651
Score = 107 (42.7 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++GS D T+K+W + RT GH GV S + II S S D ++V++ +T
Sbjct: 394 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII--SGSTDRTLKVWNAETG 451
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL 141
I TL S V M K V+G A++++WD T + L
Sbjct: 452 ECIHTLYGHTSTVRCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVL 497
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 39/143 (27%), Positives = 75/143 (52%)
Query: 171 RRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA 230
+R+ GS D T+ V+D+ + LH L GH VR + Y D R + S + D V ++D
Sbjct: 477 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDP 533
Query: 231 EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWG 290
E ++ + + GH + V S+ DG + +GS D ++++WD+ + ++T H G
Sbjct: 534 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 591
Query: 291 VSFRPLGGRVVSVSDDKSISLYE 313
+ + +VS + D ++ +++
Sbjct: 592 MELKD--NILVSGNADSTVKIWD 612
Score = 167 (63.8 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 41/148 (27%), Positives = 75/148 (50%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
DGRR+ G+ D + V+D LH L+GH V SL + + + S S DT + ++
Sbjct: 515 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH---VVSGSLDTSIRVW 571
Query: 229 DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSM---TNHT 285
D E + + ++GH S ++ + + +G++D TVK+WD+ +Q++ H
Sbjct: 572 DVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ 629
Query: 286 DQVWGVSFRPLGGRVVSVSDDKSISLYE 313
V + F V++ SDD ++ L++
Sbjct: 630 SAVTCLQFNK--NFVITSSDDGTVKLWD 655
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 51/164 (31%), Positives = 78/164 (47%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++G+ D VK+W P+ T GH V S+ GI S SLD+ +RV+DV+T
Sbjct: 519 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG 576
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
I TL S M+ K L V+G ++VK+WD T + TL P T
Sbjct: 577 NCIHTLTGHQSLTSGMEL--KDNIL-VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT 633
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHL 196
+K FV++ S D DGT+ ++D+ +F+ +L
Sbjct: 634 CLQFNKNFVIT---SSD---------DGTVKLWDLKTGEFIRNL 665
Score = 136 (52.9 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 40/144 (27%), Positives = 66/144 (45%)
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
G RI GS D T+ V+ K L L GH V S S + ++ S S D + +++
Sbjct: 396 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS---SQMRDNIIISGSTDRTLKVWN 452
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
AE + + GH S V + + +GS D T+++WD+ + + H V
Sbjct: 453 AETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 510
Query: 290 GVSFRPLGGRVVSVSDDKSISLYE 313
V + G RVVS + D + +++
Sbjct: 511 CVQYD--GRRVVSGAYDFMVKVWD 532
Score = 129 (50.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 33/110 (30%), Positives = 57/110 (51%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++GS D T+++W + Q GH V V ++ S + D V+V+D +T
Sbjct: 479 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV--SGAYDFMVKVWDPETE 536
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS 142
+ TL+ + V+ +QFD G + V+G S+++WD T N I TL+
Sbjct: 537 TCLHTLQGHTNRVYSLQFD--GIHV-VSGSLDTSIRVWDVETGNCIHTLT 583
Score = 126 (49.4 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 35/129 (27%), Positives = 62/129 (48%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H VW+ ++ R ++++GS D T+K+W + + T GH V + H
Sbjct: 425 HTGGVWS------SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 478
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
++ S S D+ +RV+D++T + L + V +Q+D + V+G VK+WD
Sbjct: 479 VV--SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDP 533
Query: 133 ATWNLIATL 141
T + TL
Sbjct: 534 ETETCLHTL 542
Score = 116 (45.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 36/108 (33%), Positives = 55/108 (50%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS-PVDPRVLFSASDDTHVHM 227
DG + GS+D +I V+DV +H L GH +SL + +L S + D+ V +
Sbjct: 555 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH----QSLTSGMELKDNILVSGNADSTVKI 610
Query: 228 YDAE-GKSLVTAM--SGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+D + G+ L T + H S V + + + + T S D TVKLWDL
Sbjct: 611 WDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDL 656
Score = 107 (42.7 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++GS D T+K+W + RT GH GV S + II S S D ++V++ +T
Sbjct: 399 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII--SGSTDRTLKVWNAETG 456
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL 141
I TL S V M K V+G A++++WD T + L
Sbjct: 457 ECIHTLYGHTSTVRCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVL 502
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 225 (84.3 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 67/267 (25%), Positives = 124/267 (46%)
Query: 12 AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGH-----CLGVVSV 66
AHE+ V A + + + T S+D+ VK+W +L T H C +
Sbjct: 655 AHEDEVLCC----AFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNK 710
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
+ H ++ A+ S DSF++++D++ T+ + V +F P LA +
Sbjct: 711 SNH---LLLATGSNDSFLKLWDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSA-DGT 766
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSV-AWSPDGRRIACGSMDGTISVF 185
+KLWD + N ++++ R L D + ++ +WS DG RI + + + +
Sbjct: 767 LKLWDVRSANEKKSINVKR-FFLSSEDPPEDVEVIVKCCSWSADGDRIIVAAKNKVL-LL 824
Query: 186 DVTRAKFLHHLE-GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHAS 244
D+ + L + GH ++ +SP D + + S V +++ + + V GH S
Sbjct: 825 DIHTSGLLTEIHTGHHSTIQYCDFSPYDHLAVIALSQYC-VELWNIDSRVKVADCRGHLS 883
Query: 245 WVLSVDASPDGAAITTGSSDRTVKLWD 271
WV V SPDG++ T S D+T+++W+
Sbjct: 884 WVHGVMFSPDGSSFLTASDDQTIRVWE 910
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 72/290 (24%), Positives = 125/290 (43%)
Query: 39 DETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATL 98
D+T+++++ + + H V+ A A+ S+D V+++D T + T
Sbjct: 636 DKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTY 695
Query: 99 EASPSEVWQMQFDPKGTTLAVAGGGSAS-VKLWDTATWNLIATLSIPRPEGLKPTDKSSS 157
E +V F K L +A G + S +KLWD T+ T+ +
Sbjct: 696 EEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKECRNTM-------FGHTNSVTH 748
Query: 158 KKFVLSVAWSPDGRRIACGSMDGTISVFDVTRA--KFLHHLEGHFM----P-------VR 204
+F SPD +A S DGT+ ++DV A K +++ F+ P V+
Sbjct: 749 CRF------SPDDELLASCSADGTLKLWDVRSANEKKSINVKRFFLSSEDPPEDVEVIVK 802
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAM-SGHASWVLSVDASPDGAAITTGSS 263
+S R++ +A + V + D L+T + +GH S + D SP S
Sbjct: 803 CCSWSADGDRIIVAAKNK--VLLLDIHTSGLLTEIHTGHHSTIQYCDFSPYDHLAVIALS 860
Query: 264 DRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
V+LW+++ R + H V GV F P G ++ SDD++I ++E
Sbjct: 861 QYCVELWNIDSRVKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 46/156 (29%), Positives = 72/156 (46%)
Query: 161 VLSVAWSPDGRRIA-CGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSA 219
V +S DG+RIA CG+ D T+ VF + L ++ H V +S D + +
Sbjct: 618 VYHACFSQDGQRIASCGA-DKTLQVFKAETGEKLLDIKAHEDEVLCCAFSS-DDSYIATC 675
Query: 220 SDDTHVHMYDAEGKSLVTAMSGHASWV--LSVDASPDGAAITTGSSDRTVKLWDLNMRAA 277
S D V ++D+ LV H+ V + + TGS+D +KLWDLN +
Sbjct: 676 SVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKEC 735
Query: 278 MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+M HT+ V F P + S S D ++ L++
Sbjct: 736 RNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWD 771
Score = 113 (44.8 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 38/159 (23%), Positives = 72/159 (45%)
Query: 158 KKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLF 217
KK V + ++ DG+ + S D I V++ +++ L+ H V+ D R+L
Sbjct: 1003 KKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVF-LQAHQETVKDFRLLR-DSRLLS 1060
Query: 218 SASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA 277
+ D T V +++ + + H VLS S D ++ S+D+T K+W + +
Sbjct: 1061 WSFDGT-VKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFELPSP 1119
Query: 278 MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKS-ISLYEYS 315
+ + H V +F L G +++ DD I ++ S
Sbjct: 1120 LHELKGHNSCVRCSAFS-LDGILLATGDDNGEIRIWNVS 1157
Score = 84 (34.6 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 26/87 (29%), Positives = 38/87 (43%)
Query: 4 AGLKSVENAHEESVWAVTWVPATETRPALLL-TGSLDETVKLWRPDDMQLERTNTGHCLG 62
+G + + +EE V T LLL TGS D +KLW + + T GH
Sbjct: 686 SGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKECRNTMFGHTNS 745
Query: 63 VVSVAAHPSGIIAASASLDSFVRVFDV 89
V P + AS S D ++++DV
Sbjct: 746 VTHCRFSPDDELLASCSADGTLKLWDV 772
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 189 (71.6 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 66/223 (29%), Positives = 101/223 (45%)
Query: 111 DPKGTTLAVAGGGSASVKLWDTATWNLIATLSIP--RPEGLKPTDK-----------SSS 157
D GT +G +K+W T + + P RP + T++ S
Sbjct: 198 DSSGTKFC-SGSWDKMLKIWSTVPTDEEDEIQEPTNRPRKKQKTEQLGLTRTPLVTLSGH 256
Query: 158 KKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLF 217
+ + SV WS D + S D T+ V+DV L G+ + + YSP+ R L
Sbjct: 257 TEAISSVLWS-DADEVCSASWDHTVRVWDVESGGLKSTLTGNKV-FNCISYSPLCKR-LA 313
Query: 218 SASDDTHVHMYDAEGK--SLVT-AMSGHASWVLSVDASPD-GAAITTGSSDRTVKLWDL- 272
S S D H+ ++D K SLV+ +++ H WV SV SP + +GS D VKLWD
Sbjct: 314 SGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLISGSLDNMVKLWDTR 373
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
+ +A + + H D+V V + G + +D+K S Y YS
Sbjct: 374 SCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYS-YRYS 415
Score = 126 (49.4 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 57/224 (25%), Positives = 99/224 (44%)
Query: 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFD-VDTNASIATLEASPSEVWQMQFDPKGTT 116
GH V ++A SG S S D ++++ V T+ E + + + + G T
Sbjct: 187 GHAGSVDAIAVDSSGTKFCSGSWDKMLKIWSTVPTDEEDEIQEPTNRPRKKQKTEQLGLT 246
Query: 117 ---LAVAGGGSASVK--LWD------TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVA 165
L G + ++ LW +A+W+ + GLK T + K ++
Sbjct: 247 RTPLVTLSGHTEAISSVLWSDADEVCSASWDHTVRVWDVESGGLKST--LTGNKVFNCIS 304
Query: 166 WSPDGRRIACGSMDGTISVFDV-TRAKFLHHLE--GHFMPVRSLVYSPVDPRVLFSASDD 222
+SP +R+A GS D I ++D T+ L L H V S+ +SP + L S S D
Sbjct: 305 YSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLISGSLD 364
Query: 223 THVHMYDAEG-KSLVTAMSGHASWVLSVDASPDGAAITTGSSDR 265
V ++D K+ + ++ H VLSVD + G ++ G+ ++
Sbjct: 365 NMVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNK 408
Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
Identities = 51/193 (26%), Positives = 86/193 (44%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNT-------GHCLGVVS 65
H + V V WV ++ LLLT S+D+T+ LW + +ER GH V +
Sbjct: 139 HTDVVKDVAWVKK-DSLSCLLLTASMDQTILLW---EWNIERNKVKALHCCRGHAGSVDA 194
Query: 66 VAAHPSGIIAASASLDSFVRVFD-VDTNASIATLEASPSEVWQMQFDPKGTT---LAVAG 121
+A SG S S D ++++ V T+ E + + + + G T L
Sbjct: 195 IAVDSSGTKFCSGSWDKMLKIWSTVPTDEEDEIQEPTNRPRKKQKTEQLGLTRTPLVTLS 254
Query: 122 GGSASVK--LWD------TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI 173
G + ++ LW +A+W+ + GLK T + +K F +++SP +R+
Sbjct: 255 GHTEAISSVLWSDADEVCSASWDHTVRVWDVESGGLKST-LTGNKVFNC-ISYSPLCKRL 312
Query: 174 ACGSMDGTISVFD 186
A GS D I ++D
Sbjct: 313 ASGSTDRHIRLWD 325
Score = 72 (30.4 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 26/126 (20%), Positives = 54/126 (42%)
Query: 14 EESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVA---AHP 70
E+ ++ W+ + + +L+GS D+T ++W + + T GH V VA
Sbjct: 95 EQCMFHDDWISSIKGAEEWILSGSYDKTSRIWSLEGKSI-MTIVGHTDVVKDVAWVKKDS 153
Query: 71 SGIIAASASLDSFVRVFD--VDTNA--SIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
+ +AS+D + +++ ++ N ++ V + D GT +G
Sbjct: 154 LSCLLLTASMDQTILLWEWNIERNKVKALHCCRGHAGSVDAIAVDSSGTKFC-SGSWDKM 212
Query: 127 VKLWDT 132
+K+W T
Sbjct: 213 LKIWST 218
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 218 (81.8 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 68/247 (27%), Positives = 111/247 (44%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL + S D T+KLW + RT GH V SVA P+G SA+ D +++++V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQT 223
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS----IPRPE 147
+ T V ++ + GT +A +V++W AT A L +
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ-TVRVWVVATKECKAELREHEHVVECI 282
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRR---IACGSMDGTISVFDVTRAKFLHHLEGHFMPVR 204
P SS G+ + GS D TI ++DV+ L L GH VR
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR 342
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
+++ + + S +DD + ++D + K + ++ H +V S+D + TGS D
Sbjct: 343 GVLFHS-GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 265 RTVKLWD 271
+TVK+W+
Sbjct: 402 QTVKVWE 408
Score = 207 (77.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 76/292 (26%), Positives = 127/292 (43%)
Query: 43 KLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASP 102
K W P + + +GH V V HP + SAS D+ ++V+D +T TL+
Sbjct: 92 KEWIPRPPE-KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 103 SEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVL 162
V + FD G LA ++KLWD + I T+ G D + S
Sbjct: 151 DSVQDISFDHSGKLLASCSA-DMTIKLWDFQGFECIRTM-----HG---HDHNVS----- 196
Query: 163 SVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
SVA P+G I + D TI +++V + GH VR +V D ++ S S+D
Sbjct: 197 SVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVR-MVRPNQDGTLIASCSND 255
Query: 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPD--------------------GAAITTGS 262
V ++ K + H V + +P+ G + +GS
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
D+T+K+WD++ + ++ H + V GV F G ++S +DDK++ +++Y
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 216 LFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
L S S D + M+D G L+T + GH +WV V G I + + D+T+++WD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ M+++ H V + F VV+ S D+++ ++E
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 115 (45.5 bits), Expect = 0.00058, P = 0.00058
Identities = 36/125 (28%), Positives = 54/125 (43%)
Query: 12 AHEESVWAVTWVPATETRPA-----LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV 66
A E S +++ +ET+ + LL+GS D+T+K+W T GH V V
Sbjct: 285 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 344
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
H G S + D +RV+D + TL A V + F K V G +
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTAPYVVTGSVDQT 403
Query: 127 VKLWD 131
VK+W+
Sbjct: 404 VKVWE 408
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 188 (71.2 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 57/166 (34%), Positives = 82/166 (49%)
Query: 155 SSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPR 214
S + + SV WS D I S D TI V+DV L G+ + + YSP+ R
Sbjct: 254 SGHTEAISSVLWS-DAEEICSASWDHTIRVWDVESGGLKSTLTGNKV-FNCISYSPLCKR 311
Query: 215 VLFSASDDTHVHMYDAEGK--SLVT-AMSGHASWVLSVDASPDGAA-ITTGSSDRTVKLW 270
L S S D H+ ++D K SLV+ +++ H WV SV SP + +GS D VKLW
Sbjct: 312 -LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370
Query: 271 DL-NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
D + +A + + H D+V V + G + +D+K S Y YS
Sbjct: 371 DTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYS-YSYS 415
Score = 172 (65.6 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 73/273 (26%), Positives = 123/273 (45%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWR----PDDMQLERTNTGHCLGVVSVAA 68
H + V V WV ++ LLLT S+D+TV LW + ++ GH V ++A
Sbjct: 139 HTDVVKDVAWVKK-DSLSCLLLTASMDQTVLLWEWNVEKNKVKALHCCRGHAGSVDAIAV 197
Query: 69 HPSGIIAASASLDSFVRVFD-VDTNASIATLEASPSEVWQMQFDPKGTT---LAVAGGGS 124
SG S S D ++++ V T+ EA+ + + + G T L G +
Sbjct: 198 DSSGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTLSGHT 257
Query: 125 ASVK--LWD------TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACG 176
++ LW +A+W+ + GLK T + K +++SP +R+A G
Sbjct: 258 EAISSVLWSDAEEICSASWDHTIRVWDVESGGLKST--LTGNKVFNCISYSPLCKRLASG 315
Query: 177 SMDGTISVFDV-TRAKFLHHLE--GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG- 232
S D I ++D T+ L L H V S+ +SP + L S S D V ++D
Sbjct: 316 STDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSC 375
Query: 233 KSLVTAMSGHASWVLSVDASPDGAAITTGSSDR 265
K+ + ++ H VLSVD + G ++ G+ ++
Sbjct: 376 KAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNK 408
Score = 117 (46.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 34/122 (27%), Positives = 63/122 (51%)
Query: 196 LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDG 255
L GH + S+++S D + SAS D + ++D E L + ++G+ + + SP
Sbjct: 253 LSGHTEAISSVLWS--DAEEICSASWDHTIRVWDVESGGLKSTLTGNKVFNC-ISYSPLC 309
Query: 256 AAITTGSSDRTVKLWDLNMR---AAMQSMTNHTDQVWGVSFRPLGGR-VVSVSDDKSISL 311
+ +GS+DR ++LWD + S+T+HT V V + P + ++S S D + L
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKL 369
Query: 312 YE 313
++
Sbjct: 370 WD 371
Score = 73 (30.8 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 28/126 (22%), Positives = 53/126 (42%)
Query: 14 EESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVA---AHP 70
E+ ++ W+ + E +L+GS D+T ++W + + T GH V VA
Sbjct: 95 EQCMFHDDWISSIEGAEEWILSGSYDKTSRIWSLEGKSI-MTIVGHTDVVKDVAWVKKDS 153
Query: 71 SGIIAASASLDSFVRVFD--VDTNA--SIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
+ +AS+D V +++ V+ N ++ V + D G +G
Sbjct: 154 LSCLLLTASMDQTVLLWEWNVEKNKVKALHCCRGHAGSVDAIAVDSSGAKFC-SGSWDKM 212
Query: 127 VKLWDT 132
+K+W T
Sbjct: 213 LKIWST 218
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 39/143 (27%), Positives = 75/143 (52%)
Query: 171 RRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA 230
+R+ GS D T+ V+D+ + LH L GH VR + Y D R + S + D V ++D
Sbjct: 525 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDP 581
Query: 231 EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWG 290
E ++ + + GH + V S+ DG + +GS D ++++WD+ + ++T H G
Sbjct: 582 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 639
Query: 291 VSFRPLGGRVVSVSDDKSISLYE 313
+ + +VS + D ++ +++
Sbjct: 640 MELKD--NILVSGNADSTVKIWD 660
Score = 166 (63.5 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 41/148 (27%), Positives = 75/148 (50%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
DGRR+ G+ D + V+D LH L+GH V SL + + + S S DT + ++
Sbjct: 563 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH---VVSGSLDTSIRVW 619
Query: 229 DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN---HT 285
D E + + ++GH S ++ + + +G++D TVK+WD+ +Q++ H
Sbjct: 620 DVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQ 677
Query: 286 DQVWGVSFRPLGGRVVSVSDDKSISLYE 313
V + F V++ SDD ++ L++
Sbjct: 678 SAVTCLQFNK--NFVITSSDDGTVKLWD 703
Score = 158 (60.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 51/164 (31%), Positives = 78/164 (47%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++G+ D VK+W P+ T GH V S+ GI S SLD+ +RV+DV+T
Sbjct: 567 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG 624
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
I TL S M+ K L V+G ++VK+WD T + TL P T
Sbjct: 625 NCIHTLTGHQSLTSGMEL--KDNIL-VSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVT 681
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHL 196
+K FV++ S D DGT+ ++D+ +F+ +L
Sbjct: 682 CLQFNKNFVIT---SSD---------DGTVKLWDLRTGEFIRNL 713
Score = 136 (52.9 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 40/144 (27%), Positives = 66/144 (45%)
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
G RI GS D T+ V+ K L L GH V S S + ++ S S D + +++
Sbjct: 444 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS---SQMRDNIIISGSTDRTLKVWN 500
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
AE + + GH S V + + +GS D T+++WD+ + + H V
Sbjct: 501 AETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 558
Query: 290 GVSFRPLGGRVVSVSDDKSISLYE 313
V + G RVVS + D + +++
Sbjct: 559 CVQYD--GRRVVSGAYDFMVKVWD 580
Score = 129 (50.5 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 33/110 (30%), Positives = 57/110 (51%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++GS D T+++W + Q GH V V ++ S + D V+V+D +T
Sbjct: 527 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV--SGAYDFMVKVWDPETE 584
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS 142
+ TL+ + V+ +QFD G + V+G S+++WD T N I TL+
Sbjct: 585 TCLHTLQGHTNRVYSLQFD--GIHV-VSGSLDTSIRVWDVETGNCIHTLT 631
Score = 126 (49.4 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 35/129 (27%), Positives = 62/129 (48%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H VW+ ++ R ++++GS D T+K+W + + T GH V + H
Sbjct: 473 HTGGVWS------SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 526
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
++ S S D+ +RV+D++T + L + V +Q+D + V+G VK+WD
Sbjct: 527 VV--SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDP 581
Query: 133 ATWNLIATL 141
T + TL
Sbjct: 582 ETETCLHTL 590
Score = 115 (45.5 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 34/108 (31%), Positives = 53/108 (49%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS-PVDPRVLFSASDDTHVHM 227
DG + GS+D +I V+DV +H L GH +SL + +L S + D+ V +
Sbjct: 603 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH----QSLTSGMELKDNILVSGNADSTVKI 658
Query: 228 YDAEGKSLVTAMSG---HASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+D + + + G H S V + + + + T S D TVKLWDL
Sbjct: 659 WDIKTGQCLQTLQGPHKHQSAVTCLQFNKN--FVITSSDDGTVKLWDL 704
Score = 107 (42.7 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++GS D T+K+W + RT GH GV S + II S S D ++V++ +T
Sbjct: 447 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII--SGSTDRTLKVWNAETG 504
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL 141
I TL S V M K V+G A++++WD T + L
Sbjct: 505 ECIHTLYGHTSTVRCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVL 550
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 219 (82.2 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 76/294 (25%), Positives = 137/294 (46%)
Query: 23 VPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDS 82
+ A + + L LTG +D+TV L+ + Q+ +T GH + +V HP I A SAS DS
Sbjct: 214 ITALDIKGNLSLTGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVLHPDNITAISASADS 273
Query: 83 FVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS 142
+RV+ ++S A ++ + V + + G + SAS D + W A
Sbjct: 274 HIRVWSATDSSSKAIIDVHQAPVTDISLNASGDYIL-----SAS----DDSYW---AFSD 321
Query: 143 IPRPEGL-KPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFM 201
I + L K + + S+ V S+ + PDG G+ D + ++D+ GH
Sbjct: 322 IRSGKSLCKVSVEPGSQIAVHSIEFHPDGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTA 381
Query: 202 PVRSLVYSPVDPRVLFSASDDTHVHMYDAEG-KSLVTAMSGHASWVLSVDASPDGAAITT 260
VRS+ +S + L + S+D V ++D K+L T + + S+ G +
Sbjct: 382 AVRSIAFSE-NGYYLATGSEDGEVKLWDLRKLKNLKTFANEEKQPINSLSFDMTGTFLGI 440
Query: 261 GSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
G + V++ + + + S+++H+ V GV F +V+ S DKS+ ++ +
Sbjct: 441 GG--QKVQVLHVKSWSEVVSLSDHSGPVTGVRFGENARSLVTCSLDKSLRVFSF 492
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 217 (81.4 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 67/247 (27%), Positives = 111/247 (44%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL + S D T+KLW + RT GH V SVA P+G SAS D +++++V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS----IPRPE 147
+ T V ++ + GT +A +V++W AT A L +
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ-TVRVWVVATKECKAELREHEHVVECI 282
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRR---IACGSMDGTISVFDVTRAKFLHHLEGHFMPVR 204
P S+ G+ + GS D TI ++D++ L L GH VR
Sbjct: 283 SWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVR 342
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
+++ + + S +DD + ++D + K + ++ H +V S+D + TGS D
Sbjct: 343 GVLFHS-GGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 265 RTVKLWD 271
+TVK+W+
Sbjct: 402 QTVKVWE 408
Score = 206 (77.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 76/292 (26%), Positives = 127/292 (43%)
Query: 43 KLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASP 102
K W P + + +GH V V HP + SAS D+ ++V+D +T TL+
Sbjct: 92 KEWIPRPPE-KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 150
Query: 103 SEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVL 162
V + FD G LA ++KLWD + I T+ G D + S
Sbjct: 151 DSVQDISFDHTGKLLASCSA-DMTIKLWDFQGFECIRTM-----HG---HDHNVS----- 196
Query: 163 SVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
SVA P+G I S D TI +++V + GH VR +V D ++ S S+D
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR-MVRPNQDGTLIASCSND 255
Query: 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPD--------------------GAAITTGS 262
V ++ K + H V + +P+ G + +GS
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGS 315
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
D+T+K+WD++ + ++ H + V GV F G ++S +DDK++ ++++
Sbjct: 316 RDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDF 367
Score = 122 (48.0 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 29/99 (29%), Positives = 52/99 (52%)
Query: 216 LFSASDDTHVHMYD-AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
L S S D + M+D + G L+T + GH +WV V G I + + D+T+++WD
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKN 369
Query: 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ M+++ H V + F VV+ S D+++ ++E
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 113 (44.8 bits), Expect = 0.00097, P = 0.00097
Identities = 36/125 (28%), Positives = 53/125 (42%)
Query: 12 AHEESVWAVTWVPATETRPA-----LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV 66
A E S ++ +ET+ + LL+GS D+T+K+W T GH V V
Sbjct: 285 APESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGV 344
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
H G S + D +RV+D + TL A V + F K V G +
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFH-KTAPYVVTGSVDQT 403
Query: 127 VKLWD 131
VK+W+
Sbjct: 404 VKVWE 408
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 219 (82.2 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 70/240 (29%), Positives = 112/240 (46%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL +GS D TV++W D+ + G C+ ++ AH + S S D +R+ D
Sbjct: 291 LLYSGSHDRTVRVW---DINSQ----GRCINILKSHAH--WVNHLSLSTDYALRIGAFDH 341
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
++P E + + + G S + + TA+ + L P + KP
Sbjct: 342 TGK---KPSTPEEAQKKALE-NYEKICKKNGNSEEMMV--TASDDYTMFLWNPL-KSTKP 394
Query: 152 TDKSSS-KKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
+ + +K V VA+SPDGR I S D +I ++D KF+ GH V + +S
Sbjct: 395 IARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSS 454
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
D R+L S S DT + ++D + L + GH V +VD S DG + +G D+ V+LW
Sbjct: 455 -DCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 57/205 (27%), Positives = 102/205 (49%)
Query: 124 SASVKLWDTATWNLIATLSIPRPE-GLKPTDKSSSK-----KFVLSVAWSPD-GRRIACG 176
S+ +K +T + I L PR +KP +SSS +L A++P R+ G
Sbjct: 103 SSLIKPGYNSTEDQITLLYTPRAVFKVKPVTRSSSAIAGHGSTILCSAFAPHTSSRMVTG 162
Query: 177 SMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAE-GKSL 235
+ D T ++D +H L+GH+ V + +SP D V+ + S D + ++D + G+ L
Sbjct: 163 AGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSP-DGEVIATGSMDNTIRLWDPKSGQCL 221
Query: 236 VTAMSGHASWVLSVDASP-----DGAA--ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQV 288
A+ GH+ W+ S+ P G+ + + S D T+K+WD R +M+ HT+ V
Sbjct: 222 GDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSV 281
Query: 289 WGVSFRPLGGRVVSVSDDKSISLYE 313
V + G + S S D+++ +++
Sbjct: 282 SCVKWGGQG-LLYSGSHDRTVRVWD 305
Score = 182 (69.1 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 76/310 (24%), Positives = 136/310 (43%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H ++ + P T +R ++TG+ D T ++W D T GH V+ V+ P G
Sbjct: 142 HGSTILCSAFAPHTSSR---MVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDG 198
Query: 73 IIAASASLDSFVRVFDVDTNASIA-TLEASPSEVWQMQFDP-----KGTTLAVAGGGS-A 125
+ A+ S+D+ +R++D + + L + + ++P G+ +A
Sbjct: 199 EVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDG 258
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
++K+WDT + T+S ++S V V W G + GS D T+ V+
Sbjct: 259 TIKIWDTVSRVCQYTMS----------GHTNS---VSCVKWGGQGL-LYSGSHDRTVRVW 304
Query: 186 DV-TRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHAS 244
D+ ++ + ++ L+ H V L S D + A D T E ++ A+ +
Sbjct: 305 DINSQGRCINILKSHAHWVNHLSLS-TDYALRIGAFDHTGKKPSTPE-EAQKKALENYEK 362
Query: 245 WVLSVDASPDGAAITTGSSDRTVKLWD-LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSV 303
+ + + + +T S D T+ LW+ L + MT H V V+F P G +VS
Sbjct: 363 -ICKKNGNSEEMMVTA-SDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSA 420
Query: 304 SDDKSISLYE 313
S D SI L++
Sbjct: 421 SFDNSIKLWD 430
Score = 160 (61.4 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 40/139 (28%), Positives = 69/139 (49%)
Query: 177 SMDGTISVFDVTRA-KFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSL 235
S D T+ +++ ++ K + + GH V + +SP D R + SAS D + ++D
Sbjct: 378 SDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSP-DGRYIVSASFDNSIKLWDGRDGKF 436
Query: 236 VTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRP 295
++ GH + V V S D + + S D T+K+WD+ R + H D+V+ V +
Sbjct: 437 ISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSV 496
Query: 296 LGGRVVSVSDDKSISLYEY 314
G RV S DK + L+ +
Sbjct: 497 DGKRVCSGGKDKMVRLWTH 515
>MGI|MGI:1920393 [details] [associations]
symbol:Wdr37 "WD repeat domain 37" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1920393 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00640000091456
EMBL:AK129254 EMBL:AK032582 EMBL:AK036203 EMBL:BC046236
IPI:IPI00387421 RefSeq:NP_001034477.1 RefSeq:NP_766033.1
UniGene:Mm.284654 ProteinModelPortal:Q8CBE3 SMR:Q8CBE3
IntAct:Q8CBE3 STRING:Q8CBE3 PhosphoSite:Q8CBE3 PaxDb:Q8CBE3
PRIDE:Q8CBE3 Ensembl:ENSMUST00000021572 Ensembl:ENSMUST00000054251
GeneID:207615 KEGG:mmu:207615 UCSC:uc007pki.1 CTD:22884
HOGENOM:HOG000013185 HOVERGEN:HBG057072 InParanoid:Q8CBE3
OMA:TGLPRDM OrthoDB:EOG4DZ1V5 NextBio:371979 Bgee:Q8CBE3
CleanEx:MM_WDR37 Genevestigator:Q8CBE3
GermOnline:ENSMUSG00000021147 Uniprot:Q8CBE3
Length = 496
Score = 218 (81.8 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 78/300 (26%), Positives = 136/300 (45%)
Query: 22 W-VPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASL 80
W V T T+P +L T S D T LW + + GH V S+ HPS +A +AS
Sbjct: 160 WDVSVTRTQPIVLGTASADHTALLWSIETGKCLVKYAGHVGSVNSIKFHPSEQLALTASG 219
Query: 81 DSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIAT 140
D ++ + L +P V T+ ++G ++ D ++
Sbjct: 220 DQTAHIWRY-----VVQLP-TPQPV-------ADTSQQISG--EDEIECSDKDEPDIDGD 264
Query: 141 LSIPRPEGLKP-TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGH 199
+S P P T S + V++ W G+++ S D T +++DV ++ +H L GH
Sbjct: 265 VSSDCPTVRVPLTSLKSHQGVVIAADWLVGGKQVVTASWDRTANLYDVETSELVHSLTGH 324
Query: 200 FMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSL--VTAMSGHASWVLSVDASPDGAA 257
+ P R++ ++S DT ++D S+ V GH V S + G
Sbjct: 325 DQELTHCCTHPTQ-RLVVTSSRDTTFRLWDFRDPSIHSVNVFQGHTDTVTSAVFTV-GDN 382
Query: 258 ITTGSSDRTVKLWDL-NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVS-DDKSISLYEYS 315
+ +GS DRTVK+WDL NMR+ + ++ TD +G +++++ D++ + L++ S
Sbjct: 383 VVSGSDDRTVKVWDLKNMRSPIATI--RTDSAINRINVCVGQKIIALPHDNRQVRLFDMS 440
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 215 (80.7 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 40/153 (26%), Positives = 81/153 (52%)
Query: 163 SVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
++ +SP+G+ AC S +G I +++ T K + L GH + +VYSP++ +L S SDD
Sbjct: 31 AIKFSPNGQNFACSSSNGKIYIYNTTTGKLITTLSGHTKGISDIVYSPINSNILASCSDD 90
Query: 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA--MQS 280
+ +++ + + + H + ++ + G + +GSSD T+ +WD+ + +
Sbjct: 91 LTIRLWNITQQRCIKLLRKHTYHITTLKFTQKGNILISGSSDETITIWDITSNGGKILTT 150
Query: 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ H+D V ++ P +VS S D + L++
Sbjct: 151 LAAHSDPVSSIALTPDDSIIVSASYDGLMRLFD 183
Score = 150 (57.9 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 45/181 (24%), Positives = 88/181 (48%)
Query: 108 MQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS 167
++F P G A + + + +++T T LI TLS K + + +S
Sbjct: 32 IKFSPNGQNFACSSS-NGKIYIYNTTTGKLITTLS-------------GHTKGISDIVYS 77
Query: 168 PDGRRI-ACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVH 226
P I A S D TI ++++T+ + + L H + +L ++ +L S S D +
Sbjct: 78 PINSNILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKFTQKG-NILISGSSDETIT 136
Query: 227 MYD--AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNH 284
++D + G ++T ++ H+ V S+ +PD + I + S D ++L+DL ++++TN
Sbjct: 137 IWDITSNGGKILTTLAAHSDPVSSIALTPDDSIIVSASYDGLMRLFDLQTSQCLKTLTNS 196
Query: 285 T 285
T
Sbjct: 197 T 197
Score = 134 (52.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 53/220 (24%), Positives = 94/220 (42%)
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
P+G A +S + + +++ T I TL + + + P + + + +++L
Sbjct: 36 PNGQNFACSSSNGKIYIYNTTTGKLITTLSGHTKGISDIVYSPINSNILASCSDDLTIRL 95
Query: 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
W+ I L K T ++ KF + G + GS D TI+++D+T
Sbjct: 96 WNITQQRCIKLLR-------KHTYHITTLKF------TQKGNILISGSSDETITIWDITS 142
Query: 190 --AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG----KSLVTA-MSGH 242
K L L H PV S+ +P D ++ SAS D + ++D + K+L + GH
Sbjct: 143 NGGKILTTLAAHSDPVSSIALTP-DDSIIVSASYDGLMRLFDLQTSQCLKTLTNSTFGGH 201
Query: 243 ASWVLS-----------VDASPDGAAITTGSSDRTVKLWD 271
+ S V+ SP+G I S D ++LW+
Sbjct: 202 GTATASTNDVINFPIAKVELSPNGQFILNSSLDGKIRLWN 241
Score = 106 (42.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 41/193 (21%), Positives = 80/193 (41%)
Query: 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHP 70
+ H + + + + P +L + S D T++LW + + H + ++
Sbjct: 65 SGHTKGISDIVYSPINSN---ILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKFTQ 121
Query: 71 SGIIAASASLDSFVRVFDVDTNAS--IATLEASPSEVWQMQFDPKGTTLAVAGGGSASVK 128
G I S S D + ++D+ +N + TL A V + P + + V+ ++
Sbjct: 122 KGNILISGSSDETITIWDITSNGGKILTTLAAHSDPVSSIALTPDDSII-VSASYDGLMR 180
Query: 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSK--KF-VLSVAWSPDGRRIACGSMDGTISVF 185
L+D T + TL+ G S++ F + V SP+G+ I S+DG I ++
Sbjct: 181 LFDLQTSQCLKTLTNSTFGGHGTATASTNDVINFPIAKVELSPNGQFILNSSLDGKIRLW 240
Query: 186 DVTRAKFLHHLEG 198
+ K +G
Sbjct: 241 NYMENKVYKTYQG 253
Score = 55 (24.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 15/64 (23%), Positives = 29/64 (45%)
Query: 215 VLFSASDDTHVHMYDAEGKSLVTAMSGHASW---VLSVDASPDGAAITTGSSDRTVKLWD 271
++ S SD T + ++D + K +V + +L VD G + S D + + D
Sbjct: 295 LIVSGSDSTGLLIWDIQSKQIVFQVDPQTCGKDAILGVDTYKQGEILGCCSRDGIITILD 354
Query: 272 LNMR 275
+N +
Sbjct: 355 MNKK 358
Score = 39 (18.8 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 14/67 (20%), Positives = 27/67 (40%)
Query: 250 DASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHT---DQVWGVSFRPLGGRVVSVSDD 306
D + I +GS + +WD+ + + + T D + GV G + S D
Sbjct: 288 DEQYNNVLIVSGSDSTGLLIWDIQSKQIVFQVDPQTCGKDAILGVDTYKQGEILGCCSRD 347
Query: 307 KSISLYE 313
I++ +
Sbjct: 348 GIITILD 354
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 213 (80.0 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 63/251 (25%), Positives = 120/251 (47%)
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
A + + ++ ++++DS R+ + T TL ++++ M + + L V+
Sbjct: 24 ACNDATLVQITSNMDSVGRI-QMRTRR---TLRGHLAKIYAMHWG-YDSRLLVSASQDGK 78
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFD 186
+ +WD+ T N + + + +SS +V++ A++P G +ACG +D S+++
Sbjct: 79 LIIWDSYTTNKMHAIPL----------RSS---WVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 187 V-TR---AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGH 242
+ TR + L GH + + +D + ++S DT ++D E T +GH
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRF--LDDSQIVTSSGDTTCALWDIETAQQTTTFTGH 183
Query: 243 ASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVS 302
+ V+S+ SPD +G+ D + KLWD+ QS T H + VSF P G +
Sbjct: 184 SGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFAT 243
Query: 303 VSDDKSISLYE 313
SDD + L++
Sbjct: 244 GSDDATCRLFD 254
Score = 160 (61.4 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 69/285 (24%), Positives = 122/285 (42%)
Query: 34 LTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA 93
+T ++D ++ M+ RT GH + ++ + SAS D + ++D T
Sbjct: 33 ITSNMDSVGRI----QMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTN 88
Query: 94 SIATLEASPSEVWQMQFDPKGTTLAVAG-GGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ + S V + P G +A G S+ T N+ + +P G
Sbjct: 89 KMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYL-- 146
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
S +F+ D +I S D T +++D+ A+ GH V SL SP D
Sbjct: 147 ---SCCRFL-------DDSQIVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSP-D 195
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
R S + D ++D + +GH S + +V P+G A TGS D T +L+DL
Sbjct: 196 MRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDL 255
Query: 273 NMRAAMQSMT-NHTDQVWG---VSFRPLGGRVVSVSDDKSISLYE 313
RA + + +H + + G V+F G +++ DD + ++++
Sbjct: 256 --RADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWD 298
Score = 159 (61.0 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 58/259 (22%), Positives = 110/259 (42%)
Query: 21 TWVPATETRPA--LLLTGSLDETVKLW----RPDDMQLERTNTGHCLGVVSVAAHPSGII 74
+WV P+ + G LD ++ R ++++ R GH G +S
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHT-GYLSCCRFLDDSQ 156
Query: 75 AASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT 134
++S D+ ++D++T T +V + P T V+G AS KLWD
Sbjct: 157 IVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPDMRTF-VSGACDASSKLWDIR- 214
Query: 135 WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK--F 192
+G+ + + +V++ P+G A GS D T +FD+ +
Sbjct: 215 ------------DGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLRADQELL 262
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS 252
L+ + + S+ +S R+L + DD + +++D ++GH + V + +
Sbjct: 263 LYSHDNIICGITSVAFSK-SGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDNRVSCLGVT 321
Query: 253 PDGAAITTGSSDRTVKLWD 271
DG A+ TGS D +++W+
Sbjct: 322 DDGMAVATGSWDSFLRIWN 340
Score = 123 (48.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 64/309 (20%), Positives = 117/309 (37%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLG-----VVSVA 67
H ++A+ W ++R LL++ S D + +W D TN H + V++ A
Sbjct: 54 HLAKIYAMHW--GYDSR--LLVSASQDGKLIIW--DSYT---TNKMHAIPLRSSWVMTCA 104
Query: 68 AHPSGIIAASASLDSFVRVFDVDTN-ASIATLEASPSEVWQMQFDP-KGTTLAVAGGGSA 125
PSG A LD+ ++++ T ++ P + + V G
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDT 164
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
+ LWD T T T S V+S++ SPD R G+ D + ++
Sbjct: 165 TCALWDIETAQQTTTF----------TGHSGD---VMSLSLSPDMRTFVSGACDASSKLW 211
Query: 186 DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD--AEGKSLVTAMSGHA 243
D+ GH + ++ + P + + SDD ++D A+ + L+ +
Sbjct: 212 DIRDGMCRQSFTGHVSDINAVSFFP-NGYAFATGSDDATCRLFDLRADQELLLYSHDNII 270
Query: 244 SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSV 303
+ SV S G + G D +WD + H ++V + G V +
Sbjct: 271 CGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 304 SDDKSISLY 312
S D + ++
Sbjct: 331 SWDSFLRIW 339
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 217 (81.4 bits), Expect = 8.1e-16, P = 8.1e-16
Identities = 81/302 (26%), Positives = 142/302 (47%)
Query: 32 LLLTGSLDETVKLWRPDDM-QLERTNTG-HCLGVVSVAAHPSGIIAASASLDSFVRVFDV 89
LL T SLD+T++L+ D +L + H V + PSG + AS S D ++
Sbjct: 24 LLATCSLDKTIRLYSLSDFAELPHSPLKFHTYAVHCCSFSPSGHVLASCSTDGTTVLWSA 83
Query: 90 DTNASIATLEA-SPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEG 148
+ ++ LE S V F P T LA +G SV LW+ ++ L S+
Sbjct: 84 HSGHTLTVLEQPGGSPVRVCCFSPDSTYLA-SGAADGSVVLWNAHSYKLYRCGSV----- 137
Query: 149 LKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVY 208
K SS +++ A+SPDG + GS G ++V+D R + LH + H + + +
Sbjct: 138 -----KDSS---LVACAFSPDGGLLVTGSSGGDLTVWD-DRMRCLHSEKAHDLGITCCSF 188
Query: 209 S--PVDPRV-------LFSASDDTHVHMYDAE-----GKSLV--TAMSGHASWVLSVDAS 252
S P+ L S D + ++ G L + +SGH + VL+ S
Sbjct: 189 SSQPLSGGEHGLQLYRLASCGQDCEIKLWVVSFTRVLGFELKYRSTLSGHCAPVLACAFS 248
Query: 253 PDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
DG + +GS D++V ++D+ ++ + ++T HT V +F P + + S DK+++++
Sbjct: 249 HDGQMLASGSVDKSVIIYDIGTQSVLHTLTQHTRYVTTCAFAPNTLLLATGSMDKTVNIW 308
Query: 313 EY 314
++
Sbjct: 309 QF 310
Score = 133 (51.9 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 55/219 (25%), Positives = 92/219 (42%)
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
P AS + D V +++ + S + F P G L V G + +
Sbjct: 107 PDSTYLASGAADGSVVLWNAHSYKLYRCGSVKDSSLVACAFSPDGGLL-VTGSSGGDLTV 165
Query: 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIA-CGSMDGTISVFDV- 187
WD + + L + L T S S + + R+A CG D I ++ V
Sbjct: 166 WD----DRMRCLHSEKAHDLGITCCSFSSQPLSGGEHGLQLYRLASCGQ-DCEIKLWVVS 220
Query: 188 -TRA-----KFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSG 241
TR K+ L GH PV + +S D ++L S S D V +YD +S++ ++
Sbjct: 221 FTRVLGFELKYRSTLSGHCAPVLACAFSH-DGQMLASGSVDKSVIIYDIGTQSVLHTLTQ 279
Query: 242 HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS 280
H +V + +P+ + TGS D+TV +W ++ Q+
Sbjct: 280 HTRYVTTCAFAPNTLLLATGSMDKTVNIWQFDLETPCQA 318
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 199 (75.1 bits), Expect = 8.1e-16, P = 8.1e-16
Identities = 66/207 (31%), Positives = 85/207 (41%)
Query: 100 ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKK 159
A S V + L GG V LW N I +L T +S
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL----------TGHTSP-- 65
Query: 160 FVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSA 219
V SV + I GS G+I V+D+ AK L L GH + SL + P V S
Sbjct: 66 -VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA-SG 123
Query: 220 SDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQ 279
S DT++ ++D K V GH+ V + SPDG + + + D TVKLWDL M
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 280 SMTNHTDQVWGVSFRPLGGRVVSVSDD 306
HT V V F P + S S D
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 182 (69.1 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 36/144 (25%), Positives = 73/144 (50%)
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
GR +A G D ++++ + + + L GH PV S+ + + ++ + S + ++D
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE-ELIVAGSQSGSIRVWD 91
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
E ++ + GH + + S+D P G + +GS D +KLWD+ + + H+ V
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151
Query: 290 GVSFRPLGGRVVSVSDDKSISLYE 313
+ F P G + S +DD ++ L++
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWD 175
Score = 166 (63.5 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 55/192 (28%), Positives = 89/192 (46%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAH-PSGIIAASASLDSFVRVFDVD 90
LL TG D V LW + + TGH V SV + P +I A + S +RV+D++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGS-IRVWDLE 93
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
+ TL + + + F P G +A +G ++KLWD R +G
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEFVA-SGSQDTNIKLWDI------------RRKGCV 140
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
+ S+ V + +SPDG+ +A + D T+ ++D+T K + GH PV + + P
Sbjct: 141 FRYRGHSQA-VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP 199
Query: 211 VDPRVLFSASDD 222
+ +L S S D
Sbjct: 200 -NEYLLASGSSD 210
Score = 154 (59.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 35/128 (27%), Positives = 62/128 (48%)
Query: 187 VTRAKF-LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASW 245
VT+ + L + H V SLV R+L + DD V+++ + + +++GH S
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 246 VLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSD 305
V SV + I GS ++++WDL ++++ H + + F P G V S S
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 306 DKSISLYE 313
D +I L++
Sbjct: 126 DTNIKLWD 133
Score = 129 (50.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 30/112 (26%), Positives = 54/112 (48%)
Query: 28 TRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVF 87
T L++ GS ++++W + ++ RT GH + S+ HP G AS S D+ ++++
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 88 DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIA 139
D+ + V ++F P G LA A +VKLWD +++
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDH-TVKLWDLTAGKMMS 183
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 218 (81.8 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 67/240 (27%), Positives = 108/240 (45%)
Query: 59 HCLGVVS-VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
H V S V +G + A+ D V V+ V+ + +L + + +Q K L
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAK-EEL 77
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS 177
VAG S S+++WD ++ TL K + S+ + P G +A GS
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLL-------------GHKANICSLDFHPYGSFVASGS 124
Query: 178 MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT 237
+D I ++DV R + + H VR L +SP D + L SA+DD V ++D ++
Sbjct: 125 LDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKVMF 183
Query: 238 AMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLG 297
+GH+ V V+ P + +GSSDRT++ WDL + + V + F P G
Sbjct: 184 EFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDG 243
Score = 198 (74.8 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 64/235 (27%), Positives = 109/235 (46%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS--VAAHPSGIIAASASLDSFVRVFDV 89
LL TG D V +W + + TGH + S ++A I+A S S +RV+D+
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQS--GSIRVWDL 92
Query: 90 DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGL 149
+ + TL + + + F P G+ +A +G +KLWD R +G
Sbjct: 93 EAAKILRTLLGHKANICSLDFHPYGSFVA-SGSLDTDIKLWDV------------RRKGC 139
Query: 150 KPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS 209
KS ++ V + +SPDG+ +A + D T+ ++D+T K + GH PV + +
Sbjct: 140 IFKYKSHTQA-VRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFH 198
Query: 210 PVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
P + +L S S D + +D E +V+ + A+ V + +PDG + G D
Sbjct: 199 PSE-YLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD 252
Score = 194 (73.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 40/144 (27%), Positives = 75/144 (52%)
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
GR +A G D ++V+ V + + L GH P+ SL S + ++ + S + ++D
Sbjct: 33 GRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKE-ELIVAGSQSGSIRVWD 91
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
E ++ + GH + + S+D P G+ + +GS D +KLWD+ + + +HT V
Sbjct: 92 LEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVR 151
Query: 290 GVSFRPLGGRVVSVSDDKSISLYE 313
+ F P G + S +DD ++ L++
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWD 175
Score = 191 (72.3 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 48/141 (34%), Positives = 67/141 (47%)
Query: 173 IACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG 232
I GS G+I V+D+ AK L L GH + SL + P V S S DT + ++D
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVA-SGSLDTDIKLWDVRR 136
Query: 233 KSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVS 292
K + H V + SPDG + + + D TVKLWDL M T H+ V V
Sbjct: 137 KGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVE 196
Query: 293 FRPLGGRVVSVSDDKSISLYE 313
F P + S S D++I ++
Sbjct: 197 FHPSEYLLASGSSDRTIRFWD 217
Score = 166 (63.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 54/201 (26%), Positives = 93/201 (46%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
L++ GS ++++W + ++ RT GH + S+ HP G AS SLD+ ++++DV
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRR 136
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
I ++ V ++F P G LA A +VKLWD ++
Sbjct: 137 KGCIFKYKSHTQAVRCLRFSPDGKWLASAADDH-TVKLWDLTAGKVMFEF---------- 185
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
T S V V + P +A GS D TI +D+ + + +E PVR ++++P
Sbjct: 186 TGHSGP---VNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNP- 241
Query: 212 DPRVLFSASDDT-HVHMYDAE 231
D L+ D+ V+ ++ E
Sbjct: 242 DGCCLYGGFQDSLRVYGWEPE 262
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 34/128 (26%), Positives = 61/128 (47%)
Query: 187 VTRAKF-LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASW 245
VT+ + L + H V SLV R+L + DD V+++ + V +++GH +
Sbjct: 6 VTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTP 65
Query: 246 VLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSD 305
+ S+ S I GS ++++WDL ++++ H + + F P G V S S
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 306 DKSISLYE 313
D I L++
Sbjct: 126 DTDIKLWD 133
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 216 (81.1 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 80/330 (24%), Positives = 142/330 (43%)
Query: 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNT---GHCL--G- 62
V HE V+ W P ++ LL +GS D T ++W + + HC+ G
Sbjct: 164 VLRGHESEVFICAWNPVSD----LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGG 219
Query: 63 --------VVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKG 114
V S+ + G + A+ S D F R++ D N + +TL ++ ++++ KG
Sbjct: 220 QDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLA-STLGQHKGPIFALKWNKKG 278
Query: 115 TTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIA 174
+ AG ++ +WD T A P P L V W + +
Sbjct: 279 NFILSAGVDKTTI-IWDAHTGE--AKQQFPFHSA--PA---------LDVDWQSNNTFAS 324
Query: 175 CGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKS 234
C S D I V + + + + +GH V ++ + P +L S SDD + ++ + S
Sbjct: 325 C-STDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMKQDS 382
Query: 235 LVTAMSGHASWVLSVDASPDG------------AAITTGSSDRTVKLWDLNMRAAMQSMT 282
V + H + ++ SP G A++ + S D TV+LWD++ + ++T
Sbjct: 383 CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLT 442
Query: 283 NHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
H + V+ V+F P G + S S DK + ++
Sbjct: 443 KHQEPVYSVAFSPDGRYLASGSFDKCVHIW 472
Score = 169 (64.5 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 70/293 (23%), Positives = 122/293 (41%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL TGS D ++W D L T H + ++ + G SA +D ++D T
Sbjct: 239 LLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT 297
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
EA Q F L V + + T + L RP +K
Sbjct: 298 G------EAKQ----QFPFH-SAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRP--IKT 344
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
+++ V ++ W P G +A S D T+ ++ + + +H L+ H + ++ +SP
Sbjct: 345 FQGHTNE--VNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPT 402
Query: 212 DPRV-----------LFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITT 260
P L SAS D+ V ++D + + ++ H V SV SPDG + +
Sbjct: 403 GPGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLAS 462
Query: 261 GSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
GS D+ V +W+ A + S T ++ V + G +V + + D S+ + +
Sbjct: 463 GSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLD 514
Score = 129 (50.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 50/189 (26%), Positives = 79/189 (41%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H V A+ W P LL + S D T+K+W H + ++ P+G
Sbjct: 348 HTNEVNAIKWDPTGN----LLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTG 403
Query: 73 ----------IIAA--SASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVA 120
++A+ SAS DS VR++DVD I TL V+ + F P G LA +
Sbjct: 404 PGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA-S 462
Query: 121 GGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG 180
G V +W+T T L+ + R G + V W+ G ++ + DG
Sbjct: 463 GSFDKCVHIWNTQTGALVHSY---RGTG-----------GIFEVCWNAAGDKVGASASDG 508
Query: 181 TISVFDVTR 189
++ V D+ +
Sbjct: 509 SVCVLDLRK 517
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 211 (79.3 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 63/251 (25%), Positives = 120/251 (47%)
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
A + + ++ ++++DS R+ + T TL ++++ M + + L V+
Sbjct: 24 ACNDATLVQITSNMDSVGRI-QMRTRR---TLRGHLAKIYAMHWG-YDSRLLVSASQDGK 78
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFD 186
+ +WD+ T N + + + +SS +V++ A++P G +ACG +D S+++
Sbjct: 79 LIIWDSYTTNKMHAIPL----------RSS---WVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 187 V-TR---AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGH 242
+ TR + L GH + + +D + ++S DT ++D E T +GH
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRF--LDDGQIITSSGDTTCALWDIETGQQTTTFTGH 183
Query: 243 ASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVS 302
+ V+S+ SPD +G+ D + KLWD+ QS T H + VSF P G +
Sbjct: 184 SGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFAT 243
Query: 303 VSDDKSISLYE 313
SDD + L++
Sbjct: 244 GSDDATCRLFD 254
Score = 160 (61.4 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 61/260 (23%), Positives = 110/260 (42%)
Query: 21 TWVPATETRPA--LLLTGSLDETVKLW----RPDDMQLERTNTGHCLGVVSVAAH-PSGI 73
+WV P+ + G LD ++ R ++++ R GH G +S G
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHT-GYLSCCRFLDDGQ 156
Query: 74 IAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTA 133
I S+ D+ ++D++T T +V + P T V+G AS KLWD
Sbjct: 157 IITSSG-DTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTF-VSGACDASSKLWDIR 214
Query: 134 TWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK-- 191
+G+ + + +V++ P G A GS D T +FD+ +
Sbjct: 215 -------------DGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDLRADQEL 261
Query: 192 FLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDA 251
L+ + + S+ +S R+L + DD + ++DA ++GH + V +
Sbjct: 262 LLYSHDNIICGITSVAFSK-SGRLLLAGYDDFNCSVWDALKGGRAGVLAGHDNRVSCLGV 320
Query: 252 SPDGAAITTGSSDRTVKLWD 271
+ DG A+ TGS D +++W+
Sbjct: 321 TDDGMAVATGSWDSFLRIWN 340
Score = 152 (58.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 69/285 (24%), Positives = 121/285 (42%)
Query: 34 LTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA 93
+T ++D ++ M+ RT GH + ++ + SAS D + ++D T
Sbjct: 33 ITSNMDSVGRI----QMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTN 88
Query: 94 SIATLEASPSEVWQMQFDPKGTTLAVAG-GGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ + S V + P G +A G S+ T N+ + +P G
Sbjct: 89 KMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYL-- 146
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
S +F+ DG+ I S D T +++D+ + GH V SL SP D
Sbjct: 147 ---SCCRFL------DDGQ-IITSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSP-D 195
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ S + D ++D + +GH S + +V P G A TGS D T +L+DL
Sbjct: 196 LKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDL 255
Query: 273 NMRAAMQSMT-NHTDQVWG---VSFRPLGGRVVSVSDDKSISLYE 313
RA + + +H + + G V+F G +++ DD + S+++
Sbjct: 256 --RADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWD 298
Score = 124 (48.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 64/311 (20%), Positives = 118/311 (37%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLG-----VVSVA 67
H ++A+ W ++R LL++ S D + +W D TN H + V++ A
Sbjct: 54 HLAKIYAMHW--GYDSR--LLVSASQDGKLIIW--DSYT---TNKMHAIPLRSSWVMTCA 104
Query: 68 AHPSGIIAASASLDSFVRVFDVDTN-ASIATLEASPSEVWQM---QFDPKGTTLAVAGGG 123
PSG A LD+ ++++ T ++ P + +F G + G
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQI--ITSSG 162
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
+ LWD T T T S V+S++ SPD + G+ D +
Sbjct: 163 DTTCALWDIETGQQTTTF----------TGHSGD---VMSLSLSPDLKTFVSGACDASSK 209
Query: 184 VFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD--AEGKSLVTAMSG 241
++D+ GH + ++ + P + SDD ++D A+ + L+ +
Sbjct: 210 LWDIRDGMCRQSFTGHISDINAVSFFP-SGYAFATGSDDATCRLFDLRADQELLLYSHDN 268
Query: 242 HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301
+ SV S G + G D +WD + H ++V + G V
Sbjct: 269 IICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRAGVLAGHDNRVSCLGVTDDGMAVA 328
Query: 302 SVSDDKSISLY 312
+ S D + ++
Sbjct: 329 TGSWDSFLRIW 339
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 211 (79.3 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 63/251 (25%), Positives = 120/251 (47%)
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
A + + ++ ++++DS R+ + T TL ++++ M + + L V+
Sbjct: 24 ACNDATLVQITSNMDSVGRI-QMRTRR---TLRGHLAKIYAMHWG-YDSRLLVSASQDGK 78
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFD 186
+ +WD+ T N + + + +SS +V++ A++P G +ACG +D S+++
Sbjct: 79 LIIWDSYTTNKMHAIPL----------RSS---WVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 187 V-TR---AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGH 242
+ TR + L GH + + +D + ++S DT ++D E T +GH
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRF--LDDGQIITSSGDTTCALWDIETGQQTTTFTGH 183
Query: 243 ASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVS 302
+ V+S+ SPD +G+ D + KLWD+ QS T H + VSF P G +
Sbjct: 184 SGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFAT 243
Query: 303 VSDDKSISLYE 313
SDD + L++
Sbjct: 244 GSDDATCRLFD 254
Score = 159 (61.0 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 65/262 (24%), Positives = 113/262 (43%)
Query: 21 TWVPATETRPA--LLLTGSLDETVKLW----RPDDMQLERTNTGHCLGVVSVAAH-PSGI 73
+WV P+ + G LD ++ R ++++ R GH G +S G
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHT-GYLSCCRFLDDGQ 156
Query: 74 IAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTA 133
I S+ D+ ++D++T T +V + P T V+G AS KLWD
Sbjct: 157 IITSSG-DTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTF-VSGACDASSKLWDIR 214
Query: 134 TWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK-- 191
+G+ + + +V++ P G A GS D T +FD+ +
Sbjct: 215 -------------DGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDLRADQEL 261
Query: 192 FLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA--EGKSLVTAMSGHASWVLSV 249
L+ + + S+ +S R+L + DD + ++DA G+S V A GH + V +
Sbjct: 262 LLYSHDNIICGITSVAFSK-SGRLLLAGYDDFNCSVWDALKGGRSGVLA--GHDNRVSCL 318
Query: 250 DASPDGAAITTGSSDRTVKLWD 271
+ DG A+ TGS D +++W+
Sbjct: 319 GVTDDGMAVATGSWDSFLRIWN 340
Score = 152 (58.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 69/285 (24%), Positives = 121/285 (42%)
Query: 34 LTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA 93
+T ++D ++ M+ RT GH + ++ + SAS D + ++D T
Sbjct: 33 ITSNMDSVGRI----QMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTN 88
Query: 94 SIATLEASPSEVWQMQFDPKGTTLAVAG-GGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ + S V + P G +A G S+ T N+ + +P G
Sbjct: 89 KMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYL-- 146
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
S +F+ DG+ I S D T +++D+ + GH V SL SP D
Sbjct: 147 ---SCCRFL------DDGQ-IITSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSP-D 195
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ S + D ++D + +GH S + +V P G A TGS D T +L+DL
Sbjct: 196 LKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDL 255
Query: 273 NMRAAMQSMT-NHTDQVWG---VSFRPLGGRVVSVSDDKSISLYE 313
RA + + +H + + G V+F G +++ DD + S+++
Sbjct: 256 --RADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWD 298
Score = 124 (48.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 64/311 (20%), Positives = 118/311 (37%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLG-----VVSVA 67
H ++A+ W ++R LL++ S D + +W D TN H + V++ A
Sbjct: 54 HLAKIYAMHW--GYDSR--LLVSASQDGKLIIW--DSYT---TNKMHAIPLRSSWVMTCA 104
Query: 68 AHPSGIIAASASLDSFVRVFDVDTN-ASIATLEASPSEVWQM---QFDPKGTTLAVAGGG 123
PSG A LD+ ++++ T ++ P + +F G + G
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQI--ITSSG 162
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
+ LWD T T T S V+S++ SPD + G+ D +
Sbjct: 163 DTTCALWDIETGQQTTTF----------TGHSGD---VMSLSLSPDLKTFVSGACDASSK 209
Query: 184 VFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD--AEGKSLVTAMSG 241
++D+ GH + ++ + P + SDD ++D A+ + L+ +
Sbjct: 210 LWDIRDGMCRQSFTGHISDINAVSFFP-SGYAFATGSDDATCRLFDLRADQELLLYSHDN 268
Query: 242 HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301
+ SV S G + G D +WD + H ++V + G V
Sbjct: 269 IICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRSGVLAGHDNRVSCLGVTDDGMAVA 328
Query: 302 SVSDDKSISLY 312
+ S D + ++
Sbjct: 329 TGSWDSFLRIW 339
>UNIPROTKB|C9JXA5 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 HOGENOM:HOG000176356 HGNC:HGNC:4398
IPI:IPI00790302 ProteinModelPortal:C9JXA5 SMR:C9JXA5 STRING:C9JXA5
PRIDE:C9JXA5 Ensembl:ENST00000451587 ArrayExpress:C9JXA5
Bgee:C9JXA5 Uniprot:C9JXA5
Length = 251
Score = 196 (74.1 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 60/244 (24%), Positives = 111/244 (45%)
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
A S + +A LD R+ + T TL ++++ M + + L V+
Sbjct: 24 ACGDSTLTQITAGLDPVGRI-QMRTRR---TLRGHLAKIYAMHWGTD-SRLLVSASQDGK 78
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFD 186
+ +WD+ T N + + + +SS +V++ A++P G +ACG +D S++
Sbjct: 79 LIIWDSYTTNKVHAIPL----------RSS---WVMTCAYAPSGNFVACGGLDNICSIYS 125
Query: 187 V-TR---AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGH 242
+ TR + L GH + + +D + ++S DT ++D E +GH
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIITSSGDTTCALWDIETGQQTVGFAGH 183
Query: 243 ASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVS 302
+ V+S+ +PDG +G+ D ++KLWD+ Q+ H + V+F P G +
Sbjct: 184 SGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTT 243
Query: 303 VSDD 306
SDD
Sbjct: 244 GSDD 247
Score = 138 (53.6 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 57/236 (24%), Positives = 93/236 (39%)
Query: 34 LTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA 93
+T LD ++ M+ RT GH + ++ + SAS D + ++D T
Sbjct: 33 ITAGLDPVGRI----QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN 88
Query: 94 SIATLEASPSEVWQMQFDPKGTTLAVAG-GGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ + S V + P G +A G S+ T N+ + +P G
Sbjct: 89 KVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYL-- 146
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
S +F+ D +I S D T +++D+ + GH V SL +P D
Sbjct: 147 ---SCCRFL-------DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAP-D 195
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVK 268
R S + D + ++D GH S + +V P+G A TTGS D T +
Sbjct: 196 GRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCR 251
Score = 124 (48.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 40/156 (25%), Positives = 64/156 (41%)
Query: 161 VLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSAS 220
+ ++ W D R + S DG + ++D +H + V + Y+P V
Sbjct: 58 IYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGL 117
Query: 221 DDT-HVH-MYDAEGKSLVTA-MSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA 277
D+ ++ + EG V+ + GH + LS D I T S D T LWD+
Sbjct: 118 DNICSIYSLKTREGNVRVSRELPGHTGY-LSCCRFLDDNQIITSSGDTTCALWDIETGQQ 176
Query: 278 MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
H+ V +S P G VS + D SI L++
Sbjct: 177 TVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 215 (80.7 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 77/327 (23%), Positives = 142/327 (43%)
Query: 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNT---GHCL--G- 62
V HE V+ W P ++ LL +GS D T ++W + + HC+ G
Sbjct: 164 VLRGHESEVFICAWNPVSD----LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGG 219
Query: 63 --------VVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKG 114
V S+ + G + A+ S D F R++ D N + +TL ++ ++++ KG
Sbjct: 220 QDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLA-STLGQHKGPIFALKWNKKG 278
Query: 115 TTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIA 174
+ AG ++ +WD T + L P + + L V W + +
Sbjct: 279 NFILSAGVDKTTI-IWDAHTGEA---------KQLFPFHSAPA----LDVDWQSNNTFAS 324
Query: 175 CGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKS 234
C S D I V + + + + +GH V ++ + P +L S SDD + ++ + +
Sbjct: 325 C-STDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMKQDN 382
Query: 235 LVTAMSGHASWVLSVDASPDGAA---------ITTGSSDRTVKLWDLNMRAAMQSMTNHT 285
V + H + ++ SP G + + S D TV+LWD++ + ++T H
Sbjct: 383 CVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQ 442
Query: 286 DQVWGVSFRPLGGRVVSVSDDKSISLY 312
+ V+ V+F P G + S S DK + ++
Sbjct: 443 EPVYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 179 (68.1 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 72/294 (24%), Positives = 129/294 (43%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL TGS D ++W D L T H + ++ + G SA +D ++D T
Sbjct: 239 LLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT 297
Query: 92 NAS--IATLEASPS-EV-WQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE 147
+ + ++P+ +V WQ T A S S D + L RP
Sbjct: 298 GEAKQLFPFHSAPALDVDWQ-----SNNTFA-----SCST---DMCIH--VCKLGQDRP- 341
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLV 207
+K +++ V ++ W P G +A S D T+ ++ + + +H L+ H + ++
Sbjct: 342 -IKTFQGHTNE--VNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIK 398
Query: 208 YSPVDPR--------VLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAIT 259
+SP P +L SAS D+ V ++D + + ++ H V SV SPDG +
Sbjct: 399 WSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA 458
Query: 260 TGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+GS D+ V +W+ A + S T ++ V + G +V + + D S+ + +
Sbjct: 459 SGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLD 511
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/186 (26%), Positives = 78/186 (41%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H V A+ W P LL + S D T+K+W H + ++ P+G
Sbjct: 348 HTNEVNAIKWDPTGN----LLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Query: 73 ---------IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGG 123
++ ASAS DS VR++DVD I TL V+ + F P G LA +G
Sbjct: 404 PGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA-SGSF 462
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
V +W+T T L+ + R G + V W+ G ++ + DG++
Sbjct: 463 DKCVHIWNTQTGALVHSY---RGTG-----------GIFEVCWNAAGDKVGASASDGSVC 508
Query: 184 VFDVTR 189
V D+ +
Sbjct: 509 VLDLRK 514
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 210 (79.0 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 65/223 (29%), Positives = 107/223 (47%)
Query: 100 ASP-SEVWQMQFDPKGTTLAVAGGGSASVKLWDTA--TWNLIATLSIPRPEGLKPTDKSS 156
A P S W + ++P GT LA GG +++W T +W + LS EG + T
Sbjct: 13 AHPDSRCWFLAWNPSGTLLASCGG-DRKIRIWGTEGDSWICKSVLS----EGHQRT---- 63
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF--LHHLEGHFMPVRSLVYSPVDPR 214
V VAWSP G +A S D T ++ + F + LEGH V+S+ ++P
Sbjct: 64 ----VRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP-SGN 118
Query: 215 VLFSASDDTHVHMYDAEGKS---LVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW- 270
+L + S D V +++ + + V+ +S H V V P + + S D TVKL+
Sbjct: 119 LLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQ 178
Query: 271 -DLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+ + ++ H VW ++F P G R+ S SDD+++ ++
Sbjct: 179 EEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIW 221
Score = 174 (66.3 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 69/235 (29%), Positives = 103/235 (43%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDM-QLERTN--TGHCLGVVSVAAH 69
HE V +V W P+ LL T S D++V +W D+ + E + + H V V H
Sbjct: 104 HENEVKSVAWAPSGN----LLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWH 159
Query: 70 PSGIIAASASLDSFVRVF--DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
PS + ASAS D V+++ + D ATLE S VW + FDP G LA +V
Sbjct: 160 PSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSD-DRTV 218
Query: 128 KLW-DTATWN---LIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
++W N + + S P + + T + + VAW +A D I
Sbjct: 219 RIWRQYLPGNEQGVACSGSDPSWKCIC-TLSGFHTRTIYDVAWCQLTGALATACGDDAIR 277
Query: 184 VF------DVTRAKF--LHHL-EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
VF D + F HL + H V + ++P +P +L S SDD V ++
Sbjct: 278 VFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWE 332
Score = 172 (65.6 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 66/235 (28%), Positives = 108/235 (45%)
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNASI--ATL-EASPSEVWQMQFDPKGTTLAVAGG 122
+A +PSG + AS D +R++ + ++ I + L E V ++ + P G LA A
Sbjct: 22 LAWNPSGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81
Query: 123 GSASVKLW--DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG 180
A+ +W + + + TL EG + V SVAW+P G +A S D
Sbjct: 82 -DATTCIWKKNQDDFECVTTL-----EG--------HENEVKSVAWAPSGNLLATCSRDK 127
Query: 181 TISVFDVTRA---KFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLV- 236
++ V++V + + L H V+ +V+ P +L SAS D V +Y EG V
Sbjct: 128 SVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHP-SQELLASASYDDTVKLYQEEGDDWVC 186
Query: 237 -TAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMT-NHTDQVW 289
+ GH S V S+ P G + + S DRTV++W + Q + + +D W
Sbjct: 187 CATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSW 241
Score = 146 (56.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 46/159 (28%), Positives = 77/159 (48%)
Query: 164 VAWSPDGRRIA-CGSMDGTISVFDVTRAKFLHHL---EGHFMPVRSLVYSPVDPRVLFSA 219
+AW+P G +A CG D I ++ ++ EGH VR + +SP L SA
Sbjct: 22 LAWNPSGTLLASCGG-DRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCG-NYLASA 79
Query: 220 SDD--THVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMR-- 275
S D T + + + VT + GH + V SV +P G + T S D++V +W+++
Sbjct: 80 SFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE 139
Query: 276 -AAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ +++HT V V + P + S S D ++ LY+
Sbjct: 140 YECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQ 178
Score = 142 (55.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 58/187 (31%), Positives = 84/187 (44%)
Query: 7 KSV-ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRP--DDMQLERTNTGHCLGV 63
KSV H+ +V V W P L + S D T +W+ DD + T GH V
Sbjct: 53 KSVLSEGHQRTVRKVAWSPCGN----YLASASFDATTCIWKKNQDDFECVTTLEGHENEV 108
Query: 64 VSVAAHPSGIIAASASLDSFVRVFDVDTNAS---IATLEASPSEVWQMQFDPKGTTLAVA 120
SVA PSG + A+ S D V V++VD ++ L + +V + + P LA A
Sbjct: 109 KSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQELLASA 168
Query: 121 GGGSASVKLWDTA--TWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSM 178
+VKL+ W ATL EG + T V S+A+ P G+R+A S
Sbjct: 169 SYDD-TVKLYQEEGDDWVCCATL-----EGHEST--------VWSIAFDPSGQRLASCSD 214
Query: 179 DGTISVF 185
D T+ ++
Sbjct: 215 DRTVRIW 221
Score = 50 (22.7 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 22/96 (22%), Positives = 39/96 (40%)
Query: 229 DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQ----SMTNH 284
D K + T H + V A+ T D +++++ + + Q S+T H
Sbjct: 238 DPSWKCICTLSGFHTRTIYDVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAH 297
Query: 285 TDQVWG-----VSFRPLG-GRVVSVSDDKSISLYEY 314
Q V++ P G + S SDD ++ +EY
Sbjct: 298 LRQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWEY 333
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 214 (80.4 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 82/306 (26%), Positives = 143/306 (46%)
Query: 31 ALLLTGSLDETVKLWRPDDM-QLERTNTG-HCLGVVSVAAHPSGIIAASASLDSFVRVFD 88
+LL T SLD+T++L+ D +L + H V PSG + AS S D +++
Sbjct: 23 SLLATCSLDKTIRLYSLSDFTELPHSPLKFHTYAVHCCCFSPSGHVLASCSTDGTTVLWN 82
Query: 89 VDTNASIATLEA-SPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE 147
++A +E + S V QF P T L V+G +V LW+ ++ L S+
Sbjct: 83 TQNGETLAVMEQPTGSPVRVCQFSPDSTCL-VSGAADGTVVLWNAQSYKLYRCGSV---- 137
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLV 207
K S +++ A+SP+G GS G I+V+D + + LH + H + +
Sbjct: 138 ------KDGS---LVACAFSPNGNFFVTGSSCGDITVWD-DKMRCLHSEKAHDLGITCCD 187
Query: 208 YS--PVDPRV-------LFSASDD----------THVHMYDAEGKSLVTAMSGHASWVLS 248
+S PV L S D TH+ ++ + KS +SGH + VL+
Sbjct: 188 FSSQPVSDGEQGLQFFRLASCGQDCQIKIWVVSFTHILGFELKYKS---TLSGHCAPVLA 244
Query: 249 VDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKS 308
S +G + +GS D++V ++D N + ++T HT V +F P + + S DK+
Sbjct: 245 CAFSHNGQMLVSGSVDKSVIVYDTNTETILHTLTQHTRYVTSCAFAPNILLLATGSMDKT 304
Query: 309 ISLYEY 314
++++++
Sbjct: 305 VNIWQF 310
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 62/268 (23%), Positives = 107/268 (39%)
Query: 32 LLLTGSLDETVKLWRPDD---MQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFD 88
+L + S D T LW + + + TG + V + P S + D V +++
Sbjct: 68 VLASCSTDGTTVLWNTQNGETLAVMEQPTGSPVRVCQFS--PDSTCLVSGAADGTVVLWN 125
Query: 89 VDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEG 148
+ + F P G V G + +WD + + L +
Sbjct: 126 AQSYKLYRCGSVKDGSLVACAFSPNGNFF-VTGSSCGDITVWD----DKMRCLHSEKAHD 180
Query: 149 LKPTDKSSSKKFVLSVAWSPDGRRIA-CGSMDGTISVFDVT-------RAKFLHHLEGHF 200
L T S + V R+A CG D I ++ V+ K+ L GH
Sbjct: 181 LGITCCDFSSQPVSDGEQGLQFFRLASCGQ-DCQIKIWVVSFTHILGFELKYKSTLSGHC 239
Query: 201 MPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITT 260
PV + +S + ++L S S D V +YD ++++ ++ H +V S +P+ + T
Sbjct: 240 APVLACAFSH-NGQMLVSGSVDKSVIVYDTNTETILHTLTQHTRYVTSCAFAPNILLLAT 298
Query: 261 GSSDRTVKLWDLNMRAAMQSMTNHTDQV 288
GS D+TV +W ++ Q+ N DQV
Sbjct: 299 GSMDKTVNIWQFDLETPCQAR-NTDDQV 325
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 218 (81.8 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 78/326 (23%), Positives = 144/326 (44%)
Query: 1 MKFAGLKSVENA------HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLER 54
++F LKS ENA H+ V V +E LL++ S E VK+W P R
Sbjct: 384 LEFYSLKSSENAKTVTIEHQGHRSDVRSVTLSEDN-TLLMSTSHSE-VKIWNPSTGSCLR 441
Query: 55 T-NTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPK 113
T ++G+ L + V + GI+ + + + + D+ + + ++A +W + P
Sbjct: 442 TIDSGYGLCSLIVPQNKYGIVGTKSGV---LEIIDIGSATKVEEVKAHGGTIWSITPIPN 498
Query: 114 GTTLAVAGGGSASVKLWD----TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169
+ V VK W+ + L++ + +K D VL+VA SPD
Sbjct: 499 DSGF-VTVSADHEVKFWEYQVKQKSGKATKKLTVSNVKSMKMNDD------VLAVAISPD 551
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
+ IA +D T+ VF + KF L GH +PV + S D ++ + S D ++ ++
Sbjct: 552 AKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISS-DGELIVTGSQDKNLKIWG 610
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
+ ++ H V+ V + + + DR VK WD + + ++ H ++W
Sbjct: 611 LDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIW 670
Query: 290 GVSFRPLGGRVVSVSDDKSISLYEYS 315
++ G +V+ S D+S+ ++ S
Sbjct: 671 CLAISNRGDFLVTGSHDRSMRRWDRS 696
Score = 169 (64.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 46/158 (29%), Positives = 76/158 (48%)
Query: 161 VLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSAS 220
V S+A S +A G DG+I ++D + + H V +L Y+ V +L S S
Sbjct: 68 VTSIASSASSL-VAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGS-MLASGS 125
Query: 221 DDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS 280
D + ++D G+S + + GH V + G + + S D+ +++WDL + MQ
Sbjct: 126 KDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQI 185
Query: 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY---EYS 315
++ H +VW V P VV+ S D+ + Y EYS
Sbjct: 186 VSGHHSEVWSVDTDPEERYVVTGSADQELRFYAVKEYS 223
Score = 154 (59.3 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 45/172 (26%), Positives = 83/172 (48%)
Query: 115 TTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIA 174
++L G S+++WDT +G + +S K V ++ ++ G +A
Sbjct: 76 SSLVAVGYADGSIRIWDTE-------------KGTCEVNFNSHKGAVTALRYNKVGSMLA 122
Query: 175 CGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKS 234
GS D I ++DV L L GH V LV+ + L S+S D + ++D E +
Sbjct: 123 SGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKK-LVSSSKDKFLRVWDLETQH 181
Query: 235 LVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTD 286
+ +SGH S V SVD P+ + TGS+D+ ++ + + ++ S+ + ++
Sbjct: 182 CMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAVKEYSSNGSLVSDSN 233
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 215 (80.7 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 75/267 (28%), Positives = 117/267 (43%)
Query: 59 HCLGVVS-VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
H V S V SG + A+ D V ++ ++ I +L S V ++ + L
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTP-EEL 77
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS 177
VAG S S+++WD ++ TL K + S+ + P G +A GS
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLM-------------GHKANICSLDFHPYGEFVASGS 124
Query: 178 MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT 237
D I ++D+ R + GH VR L +SP D + L SA+DD V ++D +++
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 238 AMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQV-----WGVS 292
GH V V+ P+ + +GSSDRT++ WDL + + V W V
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRYAGSWVVG 243
Query: 293 FRP----LG---GRVVSVSDDKSISLY 312
P +G G VS S +S SL+
Sbjct: 244 LSPPPKVVGCRYGAGVSRSHHRSCSLF 270
Score = 209 (78.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 67/214 (31%), Positives = 90/214 (42%)
Query: 100 ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKK 159
A S V + L GG V LW N I +L T +S
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL----------TGHTSP-- 65
Query: 160 FVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSA 219
V SV + I GS G+I V+D+ AK L L GH + SL + P V S
Sbjct: 66 -VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA-SG 123
Query: 220 SDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQ 279
S DT++ ++D K V GH+ V + SPDG + + + D TVKLWDL M
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 280 SMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
HT V V F P + S S D++I ++
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 191 (72.3 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 63/230 (27%), Positives = 104/230 (45%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAH-PSGIIAASASLDSFVRVFDVD 90
LL TG D V LW + + TGH V SV + P +I A + S +RV+D++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGS-IRVWDLE 93
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
+ TL + + + F P G +A +G ++KLWD R +G
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEFVA-SGSQDTNIKLWDI------------RRKGCV 140
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
+ S+ V + +SPDG+ +A + D T+ ++D+T K + GH PV + + P
Sbjct: 141 FRYRGHSQA-VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP 199
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGH-------ASWVLSVDASP 253
+ +L S S D + +D E +V+ + G SWV+ + P
Sbjct: 200 -NEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRYAGSWVVGLSPPP 248
Score = 157 (60.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 66/251 (26%), Positives = 109/251 (43%)
Query: 28 TRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVF 87
T L++ GS ++++W + ++ RT GH + S+ HP G AS S D+ ++++
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 88 DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE 147
D+ + V ++F P G LA A +VKLWD +++ P
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDH-TVKLWDLTAGKMMS--EFPGHT 189
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVR--- 204
G P + V + P+ +A GS D TI +D+ + + + +EG PVR
Sbjct: 190 G--PVNV---------VEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRYAG 238
Query: 205 SLVY--SPVDPRVL---FSASDDTHVHMYDAEGKSLVTAM------SGHASWVLSVDASP 253
S V SP P+V+ + A H + L TA + H+ SV +P
Sbjct: 239 SWVVGLSP-PPKVVGCRYGAGVSRSHHRSCSLFPGLPTAFPDFLRPTPHSRLPRSVLFNP 297
Query: 254 DGAAITTGSSD 264
DG + +G D
Sbjct: 298 DGCCLYSGCQD 308
Score = 154 (59.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 35/128 (27%), Positives = 62/128 (48%)
Query: 187 VTRAKF-LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASW 245
VT+ + L + H V SLV R+L + DD V+++ + + +++GH S
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 246 VLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSD 305
V SV + I GS ++++WDL ++++ H + + F P G V S S
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 306 DKSISLYE 313
D +I L++
Sbjct: 126 DTNIKLWD 133
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 209 (78.6 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 71/265 (26%), Positives = 120/265 (45%)
Query: 57 TGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTT 116
+GH V++ A P G S D+ VR++D+ T+ TL+ + V Q+ + P
Sbjct: 137 SGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKK 196
Query: 117 LAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP---DGR-- 171
+A AG +++W T + + LK KF+ ++W P + +
Sbjct: 197 IATAGM-EGDIRIWCPQTGKQLGST-------LK-----GHTKFITGLSWEPFHLNPKCV 243
Query: 172 RIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAE 231
R+A S D TI ++D K L L GH M V L + +++S S D V +++
Sbjct: 244 RLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWG--GEGLIYSGSQDRTVRVFNTT 301
Query: 232 GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGV 291
LV + GHA WV ++ + D + TGS D T K +D A ++ + D V
Sbjct: 302 DGRLVRVLDGHAHWVNTLALNTD-YVLRTGSYDHTGKEYDTLEEAQRVALERYND----V 356
Query: 292 SFRPLGGRV-VSVSDDKSISLYEYS 315
+ G + +S SDD ++ ++ S
Sbjct: 357 KAKSKGMEILISGSDDFTVIMWNPS 381
Score = 208 (78.3 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 64/221 (28%), Positives = 103/221 (46%)
Query: 55 TNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD-TNASIATLEASPSEVWQMQFD-- 111
T G + V+ AH +A + D +R D T TLE + + D
Sbjct: 300 TTDGRLVRVLDGHAHWVNTLALNT--DYVLRTGSYDHTGKEYDTLEEAQRVALERYNDVK 357
Query: 112 --PKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169
KG + ++G +V +W+ + + SI R G ++ + V++SPD
Sbjct: 358 AKSKGMEILISGSDDFTVIMWNPS----VTKTSISRLTG--------HQQLINLVSFSPD 405
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
GR A S D +I ++D KFL + GH V + +S D R L S S D+ + ++D
Sbjct: 406 GRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSS-DSRYLVSGSKDSTLKIWD 464
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
+ K + + GHA V +VD SPDG + +GS DR +++W
Sbjct: 465 IKTKKMEKELPGHADEVYTVDWSPDGDRVASGSKDRLLRIW 505
Score = 183 (69.5 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 76/283 (26%), Positives = 125/283 (44%)
Query: 39 DETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASI-AT 97
D TV++W T GH V+ VA P A+A ++ +R++ T + +T
Sbjct: 161 DTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKKIATAGMEGDIRIWCPQTGKQLGST 220
Query: 98 LEASPSEV----WQ-MQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
L+ + W+ +PK LA + S ++++WDT + + +LS
Sbjct: 221 LKGHTKFITGLSWEPFHLNPKCVRLASSSKDS-TIRIWDTESCKNLMSLS---------- 269
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
V + W +G I GS D T+ VF+ T + + L+GH V +L + D
Sbjct: 270 ---GHTMSVTCLKWGGEGL-IYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALN-TD 324
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAIT-TGSSDRTVKLWD 271
VL + S D YD ++ A+ + V A G I +GS D TV +W+
Sbjct: 325 -YVLRTGSYDHTGKEYDTLEEAQRVALERYND----VKAKSKGMEILISGSDDFTVIMWN 379
Query: 272 LNM-RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
++ + ++ +T H + VSF P G S S DKSI L++
Sbjct: 380 PSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWD 422
Score = 177 (67.4 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 42/139 (30%), Positives = 71/139 (51%)
Query: 176 GSMDGTISVFD--VTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGK 233
GS D T+ +++ VT+ + L GH + + +SP D R SAS D + ++D +
Sbjct: 369 GSDDFTVIMWNPSVTKTS-ISRLTGHQQLINLVSFSP-DGRYFASASFDKSIKLWDGQSG 426
Query: 234 SLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSF 293
+ GH V V S D + +GS D T+K+WD+ + + + H D+V+ V +
Sbjct: 427 KFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDW 486
Query: 294 RPLGGRVVSVSDDKSISLY 312
P G RV S S D+ + ++
Sbjct: 487 SPDGDRVASGSKDRLLRIW 505
Score = 155 (59.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 41/174 (23%), Positives = 84/174 (48%)
Query: 145 RPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVR 204
RP + S + VL+ A+SPDG+ D T+ ++D+ + H L+GH V
Sbjct: 127 RPVTRCASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVL 186
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVD-----ASPDGAAI 258
+ +SP D + + +A + + ++ + GK L + + GH ++ + +P +
Sbjct: 187 QVAWSP-DSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRL 245
Query: 259 TTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+ S D T+++WD + S++ HT V + + G + S S D+++ ++
Sbjct: 246 ASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGG-EGLIYSGSQDRTVRVF 298
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 50/181 (27%), Positives = 83/181 (45%)
Query: 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTN-TGHCLGVVSV 66
++E A ++ V A +L++GS D TV +W P + + TGH + V
Sbjct: 341 TLEEAQRVALERYNDVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLV 400
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
+ P G ASAS D ++++D + + V+Q+ + L V+G ++
Sbjct: 401 SFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYL-VSGSKDST 459
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFD 186
+K+WD T + L P G D+ V +V WSPDG R+A GS D + ++
Sbjct: 460 LKIWDIKTKKMEKEL--P---G--HADE------VYTVDWSPDGDRVASGSKDRLLRIWT 506
Query: 187 V 187
V
Sbjct: 507 V 507
Score = 120 (47.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 28/100 (28%), Positives = 51/100 (51%)
Query: 215 VLFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLN 273
+L S SDD V M++ K+ ++ ++GH + V SPDG + S D+++KLWD
Sbjct: 365 ILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQ 424
Query: 274 MRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ + H V+ V + +VS S D ++ +++
Sbjct: 425 SGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWD 464
Score = 82 (33.9 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 23/95 (24%), Positives = 42/95 (44%)
Query: 6 LKSVENAHEESVWAVTWVPA-TETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVV 64
L S H + + ++W P + L + S D T+++W + + + +GH + V
Sbjct: 217 LGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVT 276
Query: 65 SVAAHPSGIIAASASLDSFVRVFDVDTNASIATLE 99
+ G+I S S D VRVF+ + L+
Sbjct: 277 CLKWGGEGLIY-SGSQDRTVRVFNTTDGRLVRVLD 310
Score = 78 (32.5 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 33/133 (24%), Positives = 61/133 (45%)
Query: 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHP 70
+ H SV + W E L+ +GS D TV+++ D +L R GH V ++A +
Sbjct: 269 SGHTMSVTCLKW--GGE---GLIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNT 323
Query: 71 SGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLW 130
++ + S D + +D A LE ++V + KG + ++G +V +W
Sbjct: 324 DYVLR-TGSYDHTGKEYDTLEEAQRVALERY-NDV---KAKSKGMEILISGSDDFTVIMW 378
Query: 131 D-TATWNLIATLS 142
+ + T I+ L+
Sbjct: 379 NPSVTKTSISRLT 391
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 214 (80.4 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 78/327 (23%), Positives = 140/327 (42%)
Query: 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNT---GHCL--G- 62
V HE V+ W P ++ LL +GS D T ++W + + HC+ G
Sbjct: 164 VLRGHESEVFICAWNPVSD----LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGG 219
Query: 63 --------VVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKG 114
V S+ + G + A+ S D F R++ D N + +TL ++ ++++ KG
Sbjct: 220 QDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLA-STLGQHKGPIFALKWNKKG 278
Query: 115 TTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIA 174
+ AG ++ +WD T A P P L V W + +
Sbjct: 279 NFILSAGVDKTTI-IWDAHTGE--AKQQFPFHSA--PA---------LDVDWQSNNTFAS 324
Query: 175 CGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKS 234
C S D I V + + + + +GH V ++ + P +L S SDD + ++ + +
Sbjct: 325 C-STDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMKQDN 382
Query: 235 LVTAMSGHASWVLSVDASPDGAA---------ITTGSSDRTVKLWDLNMRAAMQSMTNHT 285
V + H + ++ SP G + + S D TV+LWD++ + ++T H
Sbjct: 383 CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQ 442
Query: 286 DQVWGVSFRPLGGRVVSVSDDKSISLY 312
+ V+ V+F P G + S S DK + ++
Sbjct: 443 EPVYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 177 (67.4 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 70/290 (24%), Positives = 123/290 (42%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL TGS D ++W D L T H + ++ + G SA +D ++D T
Sbjct: 239 LLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT 297
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
EA Q F L V + + T + L RP +K
Sbjct: 298 G------EAKQ----QFPFH-SAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRP--IKT 344
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
+++ V ++ W P G +A S D T+ ++ + + +H L+ H + ++ +SP
Sbjct: 345 FQGHTNE--VNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPT 402
Query: 212 DPR--------VLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSS 263
P +L SAS D+ V ++D + + ++ H V SV SPDG + +GS
Sbjct: 403 GPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSF 462
Query: 264 DRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
D+ V +W+ A + S T ++ V + G +V + + D S+ + +
Sbjct: 463 DKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLD 511
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/186 (26%), Positives = 78/186 (41%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H V A+ W P LL + S D T+K+W H + ++ P+G
Sbjct: 348 HTNEVNAIKWDPTGN----LLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Query: 73 ---------IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGG 123
++ ASAS DS VR++DVD I TL V+ + F P G LA +G
Sbjct: 404 PGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA-SGSF 462
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
V +W+T T L+ + R G + V W+ G ++ + DG++
Sbjct: 463 DKCVHIWNTQTGALVHSY---RGTG-----------GIFEVCWNAAGDKVGASASDGSVC 508
Query: 184 VFDVTR 189
V D+ +
Sbjct: 509 VLDLRK 514
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 214 (80.4 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 78/327 (23%), Positives = 140/327 (42%)
Query: 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNT---GHCL--G- 62
V HE V+ W P ++ LL +GS D T ++W + + HC+ G
Sbjct: 164 VLRGHESEVFICAWNPVSD----LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGG 219
Query: 63 --------VVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKG 114
V S+ + G + A+ S D F R++ D N + +TL ++ ++++ KG
Sbjct: 220 QDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLA-STLGQHKGPIFALKWNKKG 278
Query: 115 TTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIA 174
+ AG ++ +WD T A P P L V W + +
Sbjct: 279 NFILSAGVDKTTI-IWDAHTGE--AKQQFPFHSA--PA---------LDVDWQSNNTFAS 324
Query: 175 CGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKS 234
C S D I V + + + + +GH V ++ + P +L S SDD + ++ + +
Sbjct: 325 C-STDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMKQDN 382
Query: 235 LVTAMSGHASWVLSVDASPDGAA---------ITTGSSDRTVKLWDLNMRAAMQSMTNHT 285
V + H + ++ SP G + + S D TV+LWD++ + ++T H
Sbjct: 383 CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQ 442
Query: 286 DQVWGVSFRPLGGRVVSVSDDKSISLY 312
+ V+ V+F P G + S S DK + ++
Sbjct: 443 EPVYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 177 (67.4 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 70/290 (24%), Positives = 123/290 (42%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL TGS D ++W D L T H + ++ + G SA +D ++D T
Sbjct: 239 LLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT 297
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
EA Q F L V + + T + L RP +K
Sbjct: 298 G------EAKQ----QFPFH-SAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRP--IKT 344
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
+++ V ++ W P G +A S D T+ ++ + + +H L+ H + ++ +SP
Sbjct: 345 FQGHTNE--VNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPT 402
Query: 212 DPR--------VLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSS 263
P +L SAS D+ V ++D + + ++ H V SV SPDG + +GS
Sbjct: 403 GPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSF 462
Query: 264 DRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
D+ V +W+ A + S T ++ V + G +V + + D S+ + +
Sbjct: 463 DKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLD 511
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/186 (26%), Positives = 78/186 (41%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H V A+ W P LL + S D T+K+W H + ++ P+G
Sbjct: 348 HTNEVNAIKWDPTGN----LLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Query: 73 ---------IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGG 123
++ ASAS DS VR++DVD I TL V+ + F P G LA +G
Sbjct: 404 PGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA-SGSF 462
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
V +W+T T L+ + R G + V W+ G ++ + DG++
Sbjct: 463 DKCVHIWNTQTGALVHSY---RGTG-----------GIFEVCWNAAGDKVGASASDGSVC 508
Query: 184 VFDVTR 189
V D+ +
Sbjct: 509 VLDLRK 514
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 216 (81.1 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 63/264 (23%), Positives = 121/264 (45%)
Query: 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSE---VWQMQFDPKG 114
GH ++++ G++ S + D +RV+ ++ + + + V +
Sbjct: 384 GHTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVSCSRLK 443
Query: 115 TTLAVAGGGSASVKLW---DTATWNLIATLSIPRPEGL--KPTDKSSSKKFVLSVAWSPD 169
+ V ++K+W ++ T A L I PE L + T++ K + SVA SP+
Sbjct: 444 ESFVVTSSQDCTIKVWNIPESLTSKAKAAL-ISGPETLHAQMTERGHDKD-INSVAVSPN 501
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
+ IA GS D ++ L GH + + +SPVD ++L ++S D + ++
Sbjct: 502 DKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVD-QILATSSADGTLKLWG 560
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
+ S + GH + VL + G + +G SD +KLW + ++++ H D++W
Sbjct: 561 LQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTIKTNECVKTLDGHEDKIW 620
Query: 290 GVSFRPLGGRVVSVSDDKSISLYE 313
G+ VV+ S D SI+L++
Sbjct: 621 GLHTNKQDDMVVTASSDSSITLWK 644
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 74/302 (24%), Positives = 131/302 (43%)
Query: 27 ETRPALLLTGSLDETVKLWRPDDM--QLERTNTGHCLGVVS-VAAHP--SGIIAASASLD 81
++ LL TG D T+K+W DM Q N GVV V HP S + S+S+D
Sbjct: 119 DSTSTLLATGGCDSTIKIW---DMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMD 175
Query: 82 SFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL 141
+R++D++++ +A L+ S V + F G TL ++ G +W+ T I T
Sbjct: 176 YKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGNTL-ISSGRDKICMVWNLKTRESIRT- 233
Query: 142 SIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFM 201
IP E ++ + + G G + V++V A ++ F
Sbjct: 234 -IPIYESVEAAVLLPEQGDFSQLGVKKQGLHFLTAGSKGVLKVWEVATAACVYSQPVPFE 292
Query: 202 PVRS--------LVYSPVDPR--VLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVD- 250
PV S L + + P + + S + ++ YDA+ L ++G+ VL V
Sbjct: 293 PVESEEEASEHSLTHCMLVPERNEIVTVSVEHNIVFYDAQTLQLRKQLAGYNDEVLDVKF 352
Query: 251 ASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSIS 310
P + I ++ +K+++L+ + Q + HT+ + + G VS + DKSI
Sbjct: 353 LGPGDSHIVVATNSPQLKVFELST-SHCQILYGHTETILALDVFRKGLMFVSCAKDKSIR 411
Query: 311 LY 312
++
Sbjct: 412 VW 413
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 49/200 (24%), Positives = 88/200 (44%)
Query: 84 VRVFDVDTNASIATLEASPSE-VWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS 142
+ V DV+T A + +LE E + P L V G + +K W+ W
Sbjct: 48 LNVIDVETGALLHSLEQDDQEDITSFVLSPDDEVL-VTGSRALLLKQWN---W------- 96
Query: 143 IPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMP 202
R T K+ V ++ + +A G D TI ++D+ + H+L+G
Sbjct: 97 --RENRCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGV 154
Query: 203 VRSLVYSPVDPRV-LFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTG 261
V + + P R+ LFS+S D + ++D V + GH S V S+ + DG + +
Sbjct: 155 VHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGNTLISS 214
Query: 262 SSDRTVKLWDLNMRAAMQSM 281
D+ +W+L R +++++
Sbjct: 215 GRDKICMVWNLKTRESIRTI 234
Score = 145 (56.1 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 33/129 (25%), Positives = 56/129 (43%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS 65
L V H+ +W V + P + +L T S D T+KLW D +T GH V+
Sbjct: 524 LLGVFTGHKRGIWCVQFSPVDQ----ILATSSADGTLKLWGLQDFSCLKTFEGHDASVLK 579
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
+ G S D ++++ + TN + TL+ ++W + + K + V +
Sbjct: 580 IIFVSRGTQLLSGGSDGLLKLWTIKTNECVKTLDGHEDKIWGLHTN-KQDDMVVTASSDS 638
Query: 126 SVKLWDTAT 134
S+ LW T
Sbjct: 639 SITLWKDVT 647
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 39/132 (29%), Positives = 62/132 (46%)
Query: 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAH 69
E H++ + +V A L+ TGS D KLW D L TGH G+ V
Sbjct: 486 ERGHDKDINSV----AVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFS 541
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
P I A++S D ++++ + + + T E + V ++ F +GT L ++GG +KL
Sbjct: 542 PVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQL-LSGGSDGLLKL 600
Query: 130 WDTATWNLIATL 141
W T + TL
Sbjct: 601 WTIKTNECVKTL 612
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 63/295 (21%), Positives = 125/295 (42%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L + S+D +++W + + GH V S+A G S+ D V+++ T
Sbjct: 169 LFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTR 228
Query: 93 ASIATL------EAS---PSEVWQMQFDPKGTTLAVAGGGSASV-KLWDTATWNLIATLS 142
SI T+ EA+ P + Q K L GS V K+W+ AT + +
Sbjct: 229 ESIRTIPIYESVEAAVLLPEQGDFSQLGVKKQGLHFLTAGSKGVLKVWEVATAACVYSQP 288
Query: 143 IPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMP 202
+P E ++ +++ +S+ + P+ I S++ I +D + L G+
Sbjct: 289 VPF-EPVE-SEEEASEHSLTHCMLVPERNEIVTVSVEHNIVFYDAQTLQLRKQLAGYNDE 346
Query: 203 VRSLVY-SPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTG 261
V + + P D ++ A++ + +++ S + GH +L++D G +
Sbjct: 347 VLDVKFLGPGDSHIVV-ATNSPQLKVFELS-TSHCQILYGHTETILALDVFRKGLMFVSC 404
Query: 262 SSDRTVKLWDLNMRAAMQSMTN---HTDQVWGVSFRPLGGR-VVSVSDDKSISLY 312
+ D+++++W +N + + H V VS L VV+ S D +I ++
Sbjct: 405 AKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVSCSRLKESFVVTSSQDCTIKVW 459
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 49/227 (21%), Positives = 94/227 (41%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWR----------------PDDMQLERTN 56
H V AV+ + + + ++T S D T+K+W P+ + + T
Sbjct: 430 HAHGVGAVS---CSRLKESFVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQMTE 486
Query: 57 TGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTT 116
GH + SVA P+ + A+ S D +++ + + +W +QF P
Sbjct: 487 RGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQI 546
Query: 117 LAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACG 176
LA + ++KLW ++ + T EG D S VL + + G ++ G
Sbjct: 547 LATSSA-DGTLKLWGLQDFSCLKTF-----EG---HDAS-----VLKIIFVSRGTQLLSG 592
Query: 177 SMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 223
DG + ++ + + + L+GH + L + D V+ ++SD +
Sbjct: 593 GSDGLLKLWTIKTNECVKTLDGHEDKIWGLHTNKQDDMVVTASSDSS 639
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 211 (79.3 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 78/294 (26%), Positives = 123/294 (41%)
Query: 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRP-DDMQLERTNTGHCLGVVSVAAH 69
+ HE V+ + P T L + D + LW D T GH V+ + +
Sbjct: 63 SGHEGEVYCCKFHPNGST----LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 118
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
G + SAS D V V+D +T + L+ S V +G L G +VKL
Sbjct: 119 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 178
Query: 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
WD R + T +++ + VL+V ++ +I G +D I V+D+ +
Sbjct: 179 WDI------------RKKAAIQTFQNTYQ--VLAVTFNDTSDQIISGGIDNDIKVWDLRQ 224
Query: 190 AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD----AEGKSLVTAMSGHA-- 243
K + + GH V L S +L +A D+T V ++D A + V G+
Sbjct: 225 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNT-VRVWDVRPFAPKERCVKIFQGNVHN 283
Query: 244 --SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRP 295
+L SPDG+ I GS+DR V +WD R + + H + V+F P
Sbjct: 284 FEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHP 337
Score = 184 (69.8 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 59/222 (26%), Positives = 101/222 (45%)
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT-ATWNLIATLSIPRPEGLKP 151
A I L EV+ +F P G+TLA AG + LW+ + ATL
Sbjct: 57 APIMLLSGHEGEVYCCKFHPNGSTLASAGFDRL-ILLWNVYGDCDNYATL---------- 105
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
K S V+ + ++ DG + S D T++V+D + + L+GH V S +
Sbjct: 106 --KGHSGA-VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 162
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
P+++ + SDD V ++D K+ + + VL+V + I +G D +K+WD
Sbjct: 163 GPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWD 221
Query: 272 LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
L +M H D V G+S G ++S + D ++ +++
Sbjct: 222 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 263
Score = 178 (67.7 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 63/244 (25%), Positives = 112/244 (45%)
Query: 30 PALLLTGSLDETVKLWRPDDMQLERTNT-GHCLGVVSVAAHPSGIIAASASLDSFVRVFD 88
P L+ TGS D TVKLW D + T + V++V + + S +D+ ++V+D
Sbjct: 164 PQLVCTGSDDGTVKLW--DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 221
Query: 89 VDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEG 148
+ N T+ V + +G+ L ++ +V++WD + P+
Sbjct: 222 LRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRVWDVRPF-------APKERC 273
Query: 149 LK--PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSL 206
+K + + +K +L +WSPDG +IA GS D + V+D T + L+ L GH + +
Sbjct: 274 VKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEV 333
Query: 207 VYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRT 266
+ P +P + +T H G L+T+ + AS S A G ++ + +T
Sbjct: 334 AFHPDEPII------ETGFHRIGQGGHELLTSSNPPAS--ASQSAGITG--VSHCAQLQT 383
Query: 267 VKLW 270
V +W
Sbjct: 384 VFMW 387
>UNIPROTKB|Q5DFU0 [details] [associations]
symbol:Q5DFU0 "Probable cytosolic iron-sulfur protein
assembly protein" species:6182 "Schistosoma japonicum" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:AY813584
ProteinModelPortal:Q5DFU0 STRING:Q5DFU0 Uniprot:Q5DFU0
Length = 352
Score = 209 (78.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 61/231 (26%), Positives = 105/231 (45%)
Query: 95 IATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDK 154
+ L+AS +W + ++ KG+ L ++ G +KLW L + S PE
Sbjct: 7 VQKLKASNKRLWSLSWNHKGSVL-ISSGEDRVIKLWAKCNDQLWGS-SFSLPE------- 57
Query: 155 SSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRA------KFLHHLEGHFMPVRSLVY 208
+ KK + V WSP G IA S DGT++++ ++ A + L LEGH V+ + +
Sbjct: 58 -AHKKSIRCVTWSPCGTYIASASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAW 116
Query: 209 SPVDPRVLFSASDDTHVHMY---DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDR 265
P ++ + D V ++ D E V+ + H+ V SV P G + + S D
Sbjct: 117 CP-SGHLIATCGRDKSVWLWEFDDEEDVQCVSVLQPHSQDVKSVAWHPHGEVLVSTSYDN 175
Query: 266 TVKLW--DLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
+ ++ +L+ ++ H VW F P G + S SDD + L+ +
Sbjct: 176 KINVYREELDDWTVFAQLSGHDSTVWKAEFSPSGDILASCSDDLCVKLWSW 226
Score = 173 (66.0 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 63/206 (30%), Positives = 90/206 (43%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD---MQLERTNTGHCLG 62
L S+E H V V W P+ L+ T D++V LW DD +Q H
Sbjct: 101 LVSLEG-HTSEVKCVAWCPSGH----LIATCGRDKSVWLWEFDDEEDVQCVSVLQPHSQD 155
Query: 63 VVSVAAHPSGIIAASASLDSFVRVF--DVDTNASIATLEASPSEVWQMQFDPKGTTLAVA 120
V SVA HP G + S S D+ + V+ ++D A L S VW+ +F P G LA
Sbjct: 156 VKSVAWHPHGEVLVSTSYDNKINVYREELDDWTVFAQLSGHDSTVWKAEFSPSGDILASC 215
Query: 121 GGGSASVKLWD-------TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI 173
VKLW +++W IATLS + + + WSPD + +
Sbjct: 216 SD-DLCVKLWSWEGVCGKSSSWMCIATLS------------GYHTRTIFDLNWSPDSQLL 262
Query: 174 A-CGSMDGTISVFDVTRAKFLHHLEG 198
A CGS D + ++ + A L H+ G
Sbjct: 263 ASCGS-DNRLCIYKMP-ANGLTHIGG 286
Score = 173 (66.0 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 72/281 (25%), Positives = 121/281 (43%)
Query: 12 AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTN----TGHCLGVVSVA 67
A + +W+++W + ++L++ D +KLW + QL ++ H + V
Sbjct: 12 ASNKRLWSLSW----NHKGSVLISSGEDRVIKLWAKCNDQLWGSSFSLPEAHKKSIRCVT 67
Query: 68 AHPSGIIAASASLDSFVRVFDVDTNAS------IATLEASPSEVWQMQFDPKGTTLAVAG 121
P G ASAS D V ++ + S + +LE SEV + + P G +A G
Sbjct: 68 WSPCGTYIASASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAWCPSGHLIATCG 127
Query: 122 GGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGT 181
SV LW+ + +S+ L+P + V SVAW P G + S D
Sbjct: 128 RDK-SVWLWEFDDEEDVQCVSV-----LQPHSQD-----VKSVAWHPHGEVLVSTSYDNK 176
Query: 182 ISVF--DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG---KS-- 234
I+V+ ++ L GH V +SP +L S SDD V ++ EG KS
Sbjct: 177 INVYREELDDWTVFAQLSGHDSTVWKAEFSPSGD-ILASCSDDLCVKLWSWEGVCGKSSS 235
Query: 235 --LVTAMSG-HASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ +SG H + ++ SPD + + SD + ++ +
Sbjct: 236 WMCIATLSGYHTRTIFDLNWSPDSQLLASCGSDNRLCIYKM 276
Score = 152 (58.6 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 64/268 (23%), Positives = 118/268 (44%)
Query: 65 SVAAHPSGIIAASASLDSFVRVF----DVDTNASIATLEASPSEVWQMQFDPKGTTLAVA 120
S++ + G + S+ D ++++ D +S + EA + + + P GT +A A
Sbjct: 19 SLSWNHKGSVLISSGEDRVIKLWAKCNDQLWGSSFSLPEAHKKSIRCVTWSPCGTYIASA 78
Query: 121 G-GGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIA-CGSM 178
G+ ++ W + S P E L + +S+ V VAW P G IA CG
Sbjct: 79 SFDGTVTI-------WKISEAHSAPEMEALVSLEGHTSE--VKCVAWCPSGHLIATCGR- 128
Query: 179 DGTISVF---DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY--DAEGK 233
D ++ ++ D + + L+ H V+S+ + P VL S S D +++Y + +
Sbjct: 129 DKSVWLWEFDDEEDVQCVSVLQPHSQDVKSVAWHP-HGEVLVSTSYDNKINVYREELDDW 187
Query: 234 SLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS-------MTN-HT 285
++ +SGH S V + SP G + + S D VKLW S ++ HT
Sbjct: 188 TVFAQLSGHDSTVWKAEFSPSGDILASCSDDLCVKLWSWEGVCGKSSSWMCIATLSGYHT 247
Query: 286 DQVWGVSFRPLGGRVVSVSDDKSISLYE 313
++ +++ P + S D + +Y+
Sbjct: 248 RTIFDLNWSPDSQLLASCGSDNRLCIYK 275
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 209 (78.6 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 45/160 (28%), Positives = 81/160 (50%)
Query: 160 FVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFL---HHLEG-HFMPVRSLVYSPVDPRV 215
++++ A++P G +ACG +D ++V+ +T + + G H + +Y D ++
Sbjct: 114 WIMACAYAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQI 173
Query: 216 LFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPD--GAAITTGSSDRTVKLWDLN 273
L + D T ++D E L+ + GH+ V+++D +P+ G +GS DR +WD+
Sbjct: 174 LTGSGDSTCA-LWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMR 232
Query: 274 MRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+QS H V V F P G + + SDD S LY+
Sbjct: 233 SGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYD 272
Score = 184 (69.8 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 67/261 (25%), Positives = 118/261 (45%)
Query: 21 TWVPATETRPA--LLLTGSLDETVKLW---RPDDMQLERTNTGHCLGVVSVAAHPSG--- 72
TW+ A P+ + G LD V ++ ++M ++ G +S +P+
Sbjct: 113 TWIMACAYAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQ 172
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGT-TLAVAGGGSASVKLWD 131
I+ S DS ++DV++ + + +V + P T V+G +WD
Sbjct: 173 ILTGSG--DSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWD 230
Query: 132 TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT--R 189
+ +++ + EG + +D V SV + P G IA GS D + ++D+ R
Sbjct: 231 MRSGHVVQSF-----EGHQ-SD-------VNSVKFHPCGDAIATGSDDSSCRLYDMRADR 277
Query: 190 AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSV 249
+ E V S+ +S V R+LF+ +D V+++D V + GH + V V
Sbjct: 278 EVAVFAKESIIFGVNSVDFS-VSGRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCV 336
Query: 250 DASPDGAAITTGSSDRTVKLW 270
SPDG A++TGS D T+++W
Sbjct: 337 QVSPDGTALSTGSWDYTIRVW 357
Score = 133 (51.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 41/146 (28%), Positives = 71/146 (48%)
Query: 171 RRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLF-SASDDTHVHMYD 229
++I GS D T +++DV + L GH V ++ +P + F S S D ++D
Sbjct: 171 QQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWD 230
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL--NMRAAMQSMTNHTDQ 287
+V + GH S V SV P G AI TGS D + +L+D+ + A+ + +
Sbjct: 231 MRSGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADREVAVFAKESIIFG 290
Query: 288 VWGVSFRPLGGRVVSVSDDKSISLYE 313
V V F G + + +D +++L++
Sbjct: 291 VNSVDFSVSGRLLFAGYNDYTVNLWD 316
Score = 132 (51.5 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 53/195 (27%), Positives = 77/195 (39%)
Query: 128 KLWDTATWNLIATLSIPRPEGLKPTD--KSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
KL D N+ L +KP K K VL WSPD R I S DG + ++
Sbjct: 39 KLNDVNLSNIAERLEQIAYVNIKPRKVLKGHQAK-VLCTDWSPDKRHIISSSQDGRLIIW 97
Query: 186 DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY----DAEGKSLVTAMSG 241
D H + + + Y+P V D+ V +Y D E + +
Sbjct: 98 DAFTTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNK-VTVYPITSDEEMAAKKRTVGT 156
Query: 242 HASWVLSVDASPDG-AAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRP--LGG 298
H S+ +S P+ I TGS D T LWD+ +QS H+ V + P G
Sbjct: 157 HTSY-MSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGN 215
Query: 299 RVVSVSDDKSISLYE 313
VS S D+ +++
Sbjct: 216 TFVSGSCDRMAFIWD 230
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 212 (79.7 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 78/327 (23%), Positives = 139/327 (42%)
Query: 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNT---GHCL--G- 62
V HE V+ W P ++ LL +GS D T ++W + HC+ G
Sbjct: 164 VLRGHESEVFICAWNPVSD----LLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGG 219
Query: 63 --------VVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKG 114
V S+ + G + A+ S D F R++ D N + +TL ++ ++++ KG
Sbjct: 220 QDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLA-STLGQHKGPIFALKWNKKG 278
Query: 115 TTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIA 174
+ AG ++ +WD T A P P L V W + +
Sbjct: 279 NFILSAGVDKTTI-IWDAHTGE--AKQQFPFHSA--PA---------LDVDWQSNNTFAS 324
Query: 175 CGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKS 234
C S D I V + + + + +GH V ++ + P +L S SDD + ++ + +
Sbjct: 325 C-STDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMKQDN 382
Query: 235 LVTAMSGHASWVLSVDASPDGAA---------ITTGSSDRTVKLWDLNMRAAMQSMTNHT 285
V + H + ++ SP G + + S D TV+LWD++ + ++T H
Sbjct: 383 CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQ 442
Query: 286 DQVWGVSFRPLGGRVVSVSDDKSISLY 312
+ V+ V+F P G + S S DK + ++
Sbjct: 443 EPVYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 177 (67.4 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 70/290 (24%), Positives = 123/290 (42%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL TGS D ++W D L T H + ++ + G SA +D ++D T
Sbjct: 239 LLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT 297
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
EA Q F L V + + T + L RP +K
Sbjct: 298 G------EAKQ----QFPFH-SAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRP--IKT 344
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
+++ V ++ W P G +A S D T+ ++ + + +H L+ H + ++ +SP
Sbjct: 345 FQGHTNE--VNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPT 402
Query: 212 DPR--------VLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSS 263
P +L SAS D+ V ++D + + ++ H V SV SPDG + +GS
Sbjct: 403 GPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSF 462
Query: 264 DRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
D+ V +W+ A + S T ++ V + G +V + + D S+ + +
Sbjct: 463 DKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLD 511
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/186 (26%), Positives = 78/186 (41%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H V A+ W P LL + S D T+K+W H + ++ P+G
Sbjct: 348 HTNEVNAIKWDPTGN----LLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Query: 73 ---------IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGG 123
++ ASAS DS VR++DVD I TL V+ + F P G LA +G
Sbjct: 404 PGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA-SGSF 462
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
V +W+T T L+ + R G + V W+ G ++ + DG++
Sbjct: 463 DKCVHIWNTQTGALVHSY---RGTG-----------GIFEVCWNAAGDKVGASASDGSVC 508
Query: 184 VFDVTR 189
V D+ +
Sbjct: 509 VLDLRK 514
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 212 (79.7 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 78/327 (23%), Positives = 139/327 (42%)
Query: 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNT---GHCL--G- 62
V HE V+ W P ++ LL +GS D T ++W + HC+ G
Sbjct: 164 VLRGHESEVFICAWNPVSD----LLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGG 219
Query: 63 --------VVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKG 114
V S+ + G + A+ S D F R++ D N + +TL ++ ++++ KG
Sbjct: 220 QDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLA-STLGQHKGPIFALKWNKKG 278
Query: 115 TTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIA 174
+ AG ++ +WD T A P P L V W + +
Sbjct: 279 NFILSAGVDKTTI-IWDAHTGE--AKQQFPFHSA--PA---------LDVDWQSNNTFAS 324
Query: 175 CGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKS 234
C S D I V + + + + +GH V ++ + P +L S SDD + ++ + +
Sbjct: 325 C-STDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMKQDN 382
Query: 235 LVTAMSGHASWVLSVDASPDGAA---------ITTGSSDRTVKLWDLNMRAAMQSMTNHT 285
V + H + ++ SP G + + S D TV+LWD++ + ++T H
Sbjct: 383 CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQ 442
Query: 286 DQVWGVSFRPLGGRVVSVSDDKSISLY 312
+ V+ V+F P G + S S DK + ++
Sbjct: 443 EPVYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 177 (67.4 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 70/290 (24%), Positives = 123/290 (42%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL TGS D ++W D L T H + ++ + G SA +D ++D T
Sbjct: 239 LLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT 297
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
EA Q F L V + + T + L RP +K
Sbjct: 298 G------EAKQ----QFPFH-SAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRP--IKT 344
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
+++ V ++ W P G +A S D T+ ++ + + +H L+ H + ++ +SP
Sbjct: 345 FQGHTNE--VNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPT 402
Query: 212 DPR--------VLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSS 263
P +L SAS D+ V ++D + + ++ H V SV SPDG + +GS
Sbjct: 403 GPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSF 462
Query: 264 DRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
D+ V +W+ A + S T ++ V + G +V + + D S+ + +
Sbjct: 463 DKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLD 511
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/186 (26%), Positives = 78/186 (41%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H V A+ W P LL + S D T+K+W H + ++ P+G
Sbjct: 348 HTNEVNAIKWDPTGN----LLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Query: 73 ---------IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGG 123
++ ASAS DS VR++DVD I TL V+ + F P G LA +G
Sbjct: 404 PGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA-SGSF 462
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
V +W+T T L+ + R G + V W+ G ++ + DG++
Sbjct: 463 DKCVHIWNTQTGALVHSY---RGTG-----------GIFEVCWNAAGDKVGASASDGSVC 508
Query: 184 VFDVTR 189
V D+ +
Sbjct: 509 VLDLRK 514
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 213 (80.0 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 76/317 (23%), Positives = 138/317 (43%)
Query: 7 KSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV 66
K N + V + W LL TGS D ++W + +L T + H + S+
Sbjct: 317 KGKSNEKSKDVTTLDW----NGEGTLLATGSCDGQARIWTLNG-ELISTLSKHKGPIFSL 371
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFD-PKGTTLAVAGGGSA 125
+ G + S+D V+DV +E W+ QF+ G TL V +
Sbjct: 372 KWNKKGDYLLTGSVDRTAVVWDVK------------AEEWKQQFEFHSGPTLDVDWRNNV 419
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
S T + + + RP K + V V W P G +A S D T ++
Sbjct: 420 SFATSSTDSMIYLCKIGETRPA--KTFTGHQGE--VNCVKWDPTGSLLASCSDDSTAKIW 475
Query: 186 DVTRAKFLHHLEGHFMPVRSLVYSPVDPRV--------LFSASDDTHVHMYDAEGKSLVT 237
++ ++ F+H L H + ++ +SP P L SAS D+ V ++DAE ++
Sbjct: 476 NIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLC 535
Query: 238 AMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLG 297
+ +GH V S+ SP+G I +GS D+++ +W + +++ T + ++ V + G
Sbjct: 536 SFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNGG-IFEVCWNKEG 594
Query: 298 GRVVSVSDDKSISLYEY 314
++ + D S+ + ++
Sbjct: 595 NKIAACFADNSVCVLDF 611
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 64/268 (23%), Positives = 115/268 (42%)
Query: 49 DMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQM 108
+M +++T+ G S A P I+ S S + N+ + LE SEV
Sbjct: 219 EMVIDQTDK-EIAGDGSTGAEPMDIVMTPTSQTSHI------PNSDVRILEGHTSEVCAC 271
Query: 109 QFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGL---KPTDKSSSK-KFVLSV 164
+ P + LA +G G A+ ++W + A + L KS+ K K V ++
Sbjct: 272 AWSPSASLLA-SGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSNEKSKDVTTL 330
Query: 165 AWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTH 224
W+ +G +A GS DG ++ + + + L H P+ SL ++ +L + D T
Sbjct: 331 DWNGEGTLLATGSCDGQARIWTLN-GELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTA 389
Query: 225 VHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNH 284
V ++D + + H+ L VD + + T S+D + L + ++ T H
Sbjct: 390 V-VWDVKAEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDSMIYLCKIGETRPAKTFTGH 447
Query: 285 TDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+V V + P G + S SDD + ++
Sbjct: 448 QGEVNCVKWDPTGSLLASCSDDSTAKIW 475
Score = 169 (64.5 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 78/321 (24%), Positives = 133/321 (41%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H V A W P+ +LL +GS D T ++W + + +TG + + + H G
Sbjct: 264 HTSEVCACAWSPSA----SLLASGSGDATARIWSIPEGSFKAVHTGRNINAL-ILKHAKG 318
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPS-----EVWQMQFDPKGTTLAVAGGGSASV 127
+ S D V +D N TL A+ S +W + + +TL+ G S+
Sbjct: 319 K-SNEKSKD----VTTLDWNGE-GTLLATGSCDGQARIWTLNGELI-STLSKHKGPIFSL 371
Query: 128 KLWDTATWNLIATLSIPRPE---GLKPTDKSSSKKF----VLSVAWSPDGRRIACGSMDG 180
K W+ + + T S+ R +K + +F L V W + A S D
Sbjct: 372 K-WNKKG-DYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDS 428
Query: 181 TISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS 240
I + + + GH V + + P +L S SDD+ +++ + + V +
Sbjct: 429 MIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGS-LLASCSDDSTAKIWNIKQSTFVHDLR 487
Query: 241 GHASWVLSVDASPDGAA---------ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGV 291
H + ++ SP G + + S D TVKLWD + + S H + V+ +
Sbjct: 488 EHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSL 547
Query: 292 SFRPLGGRVVSVSDDKSISLY 312
+F P G + S S DKSI ++
Sbjct: 548 AFSPNGEYIASGSLDKSIHIW 568
Score = 145 (56.1 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 62/257 (24%), Positives = 105/257 (40%)
Query: 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFD--------VDTNASIATL-----EASPSE 104
GH V + A PS + AS S D+ R++ V T +I L + +E
Sbjct: 263 GHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSNE 322
Query: 105 VWQ--MQFDPKGT-TLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFV 161
+ D G TL G ++W T LI+TLS + +G P +
Sbjct: 323 KSKDVTTLDWNGEGTLLATGSCDGQARIW-TLNGELISTLS--KHKG--P---------I 368
Query: 162 LSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASD 221
S+ W+ G + GS+D T V+DV ++ E H P + + V F+ S
Sbjct: 369 FSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRN---NVSFATSS 425
Query: 222 -DTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS 280
D+ +++ +GH V V P G+ + + S D T K+W++ +
Sbjct: 426 TDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHD 485
Query: 281 MTNHTDQVWGVSFRPLG 297
+ HT +++ + + P G
Sbjct: 486 LREHTKEIYTIRWSPTG 502
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 207 (77.9 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 65/233 (27%), Positives = 111/233 (47%)
Query: 90 DTNASIATLEASP-SEVWQMQFDPKGTTLAVAGGGSASVKLWDTA--TWNLIATLSIPRP 146
D+ + + A P S W + ++P GT LA GG +++W T +W + LS
Sbjct: 3 DSLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGG-DRRIRIWGTEGDSWICKSVLS---- 57
Query: 147 EGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF--LHHLEGHFMPVR 204
EG + T V VAWSP G +A S D T ++ + F + LEGH V+
Sbjct: 58 EGHQRT--------VRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVK 109
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKS---LVTAMSGHASWVLSVDASPDGAAITTG 261
S+ ++P +L + S D V +++ + + V+ ++ H V V P + +
Sbjct: 110 SVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASA 168
Query: 262 SSDRTVKLW--DLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
S D TVKL+ + + ++ H VW ++F P G R+ S SDD+++ ++
Sbjct: 169 SYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221
Score = 173 (66.0 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 68/231 (29%), Positives = 100/231 (43%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDM-QLERTNT--GHCLGVVSVAAH 69
HE V +V W P+ LL T S D++V +W D+ + E + H V V H
Sbjct: 104 HENEVKSVAWAPSGN----LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWH 159
Query: 70 PSGIIAASASLDSFVRVF--DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
PS + ASAS D V+++ + D ATLE S VW + FDP G LA +V
Sbjct: 160 PSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSD-DRTV 218
Query: 128 KLW-DTATWN---LIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
++W N + + S P + + S+ + +AW +A D I
Sbjct: 219 RIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRT-IYDIAWCQLTGALATACGDDAIR 277
Query: 184 VF------DVTRAKF--LHHL-EGHFMPVRSLVYSPVDPRVLFSASDDTHV 225
VF D + F HL + H V + ++P +P +L S SDD V
Sbjct: 278 VFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEV 328
Score = 157 (60.3 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 64/235 (27%), Positives = 107/235 (45%)
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNASI--ATL-EASPSEVWQMQFDPKGTTLAVAGG 122
+A +P+G + AS D +R++ + ++ I + L E V ++ + P G LA A
Sbjct: 22 LAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81
Query: 123 GSASVKLW--DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG 180
A+ +W + + + TL EG + V SVAW+P G +A S D
Sbjct: 82 -DATTCIWKKNQDDFECVTTL-----EG--------HENEVKSVAWAPSGNLLATCSRDK 127
Query: 181 TISVFDVTRA---KFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLV- 236
++ V++V + + L H V+ +V+ P +L SAS D V +Y E V
Sbjct: 128 SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP-SQELLASASYDDTVKLYREEEDDWVC 186
Query: 237 -TAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMT-NHTDQVW 289
+ GH S V S+ P G + + S DRTV++W + Q + + +D W
Sbjct: 187 CATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSW 241
Score = 141 (54.7 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 58/187 (31%), Positives = 85/187 (45%)
Query: 7 KSV-ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRP--DDMQLERTNTGHCLGV 63
KSV H+ +V V W P L + S D T +W+ DD + T GH V
Sbjct: 53 KSVLSEGHQRTVRKVAWSPCGN----YLASASFDATTCIWKKNQDDFECVTTLEGHENEV 108
Query: 64 VSVAAHPSGIIAASASLDSFVRVFDVDTNAS---IATLEASPSEVWQMQFDPKGTTLAVA 120
SVA PSG + A+ S D V V++VD ++ L + +V + + P LA A
Sbjct: 109 KSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASA 168
Query: 121 GGGSASVKLW--DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSM 178
+VKL+ + W ATL EG + T V S+A+ P G+R+A S
Sbjct: 169 SYDD-TVKLYREEEDDWVCCATL-----EGHEST--------VWSLAFDPSGQRLASCSD 214
Query: 179 DGTISVF 185
D T+ ++
Sbjct: 215 DRTVRIW 221
Score = 47 (21.6 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 20/96 (20%), Positives = 39/96 (40%)
Query: 229 DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQ----SMTNH 284
D K + T H+ + + A+ T D ++++ + + Q S+T H
Sbjct: 238 DPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAH 297
Query: 285 TDQVWG-----VSFRPLG-GRVVSVSDDKSISLYEY 314
Q V++ P G + S SDD ++ ++Y
Sbjct: 298 LHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKY 333
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 211 (79.3 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 82/332 (24%), Positives = 144/332 (43%)
Query: 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTG-------HC 60
+V HE V+ W P ++ LL +GS D T ++W + E +N G HC
Sbjct: 177 TVLRGHESEVFICAWNPVSD----LLASGSGDSTARIWNLN----ENSNGGSTQLVLRHC 228
Query: 61 L--G---------VVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQ 109
+ G V S+ + G + A+ S D F R++ D N + +TL ++ ++
Sbjct: 229 IREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLA-STLGQHKGPIFALK 287
Query: 110 FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169
++ KG + AG ++ +WD T A P P L V W +
Sbjct: 288 WNKKGNYILSAGVDKTTI-IWDAHTGE--AKQQFPFHSA--PA---------LDVDWQNN 333
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
+C S D I V + + + +GH V ++ + P +L S SDD + ++
Sbjct: 334 TTFASC-STDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWS 391
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAA---------ITTGSSDRTVKLWDLNMRAAMQS 280
+ + V + H+ + ++ SP G A + + S D TV+LWD+ + +
Sbjct: 392 MKQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHT 451
Query: 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+T H + V+ V+F P G + S S DK + ++
Sbjct: 452 LTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 483
Score = 179 (68.1 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 69/290 (23%), Positives = 125/290 (43%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL TGS D ++W +D L T H + ++ + G SA +D ++D T
Sbjct: 253 LLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHT 311
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ + + + TT A S S D + L RP +K
Sbjct: 312 GEAKQQFPFHSAPALDVDWQ-NNTTFA-----SCST---DMCIH--VCRLGCDRP--VKT 358
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
+++ V ++ W P G +A S D T+ ++ + + +H L+ H + ++ +SP
Sbjct: 359 FQGHTNE--VNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPT 416
Query: 212 DPR--------VLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSS 263
P +L SAS D+ V ++D E + ++ H V SV SPDG + +GS
Sbjct: 417 GPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSF 476
Query: 264 DRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
D+ V +W+ + + S T ++ V + G +V + + D S+ + +
Sbjct: 477 DKCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLD 525
Score = 137 (53.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 48/186 (25%), Positives = 80/186 (43%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H V A+ W P+ LL + S D T+K+W H + ++ P+G
Sbjct: 362 HTNEVNAIKWDPSG----MLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTG 417
Query: 73 ---------IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGG 123
I+ ASAS DS VR++DV+ + TL V+ + F P G LA +G
Sbjct: 418 PATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLA-SGSF 476
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
V +W+T + +L+ + R G + V W+ G ++ + DG++
Sbjct: 477 DKCVHIWNTQSGSLVHSY---RGTG-----------GIFEVCWNARGDKVGASASDGSVC 522
Query: 184 VFDVTR 189
V D+ +
Sbjct: 523 VLDLRK 528
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 206 (77.6 bits), Expect = 6.8e-15, P = 6.8e-15
Identities = 64/223 (28%), Positives = 107/223 (47%)
Query: 100 ASP-SEVWQMQFDPKGTTLAVAGGGSASVKLWDTA--TWNLIATLSIPRPEGLKPTDKSS 156
A P S W + ++P GT LA GG +++W T +W + LS EG + T
Sbjct: 13 AHPDSRCWFLAWNPTGTLLASCGG-DRKIRIWGTEGDSWICKSVLS----EGHQRT---- 63
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF--LHHLEGHFMPVRSLVYSPVDPR 214
V VAWSP G +A S D T ++ + F + LEGH V+S+ ++P
Sbjct: 64 ----VRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP-SGN 118
Query: 215 VLFSASDDTHVHMYDAEGKS---LVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW- 270
+L + S D V +++ + + V+ ++ H V V P + + S D TVKL+
Sbjct: 119 LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQ 178
Query: 271 -DLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+ + ++ H VW ++F P G R+ S SDD+++ ++
Sbjct: 179 EEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIW 221
Score = 169 (64.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 65/235 (27%), Positives = 108/235 (45%)
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNASI--ATL-EASPSEVWQMQFDPKGTTLAVAGG 122
+A +P+G + AS D +R++ + ++ I + L E V ++ + P G LA A
Sbjct: 22 LAWNPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81
Query: 123 GSASVKLW--DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG 180
A+ +W + + + TL EG + V SVAW+P G +A S D
Sbjct: 82 -DATTCIWKKNQDDFECVTTL-----EG--------HENEVKSVAWAPSGNLLATCSRDK 127
Query: 181 TISVFDVTRA---KFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLV- 236
++ V++V + + L H V+ +V+ P +L SAS D V +Y EG V
Sbjct: 128 SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP-SQELLASASYDDTVKLYQEEGDDWVC 186
Query: 237 -TAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMT-NHTDQVW 289
+ GH S V S+ P G + + S DRTV++W + Q + + +D W
Sbjct: 187 CATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSW 241
Score = 164 (62.8 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 67/234 (28%), Positives = 96/234 (41%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDM-QLERTNT--GHCLGVVSVAAH 69
HE V +V W P+ LL T S D++V +W D+ + E + H V V H
Sbjct: 104 HENEVKSVAWAPSGN----LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWH 159
Query: 70 PSGIIAASASLDSFVRVF--DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
PS + ASAS D V+++ + D ATLE S VW + FDP G LA +V
Sbjct: 160 PSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSD-DRTV 218
Query: 128 KLW-DTATWNLIATLSIPRPEGLKPTDKSSS--KKFVLSVAWSPDGRRIACGSMDGTISV 184
++W N K S + + VAW +A D I V
Sbjct: 219 RIWRQYLPGNEQGVACSGSDPSWKCVCTLSGFHTRTIYDVAWCQLTGALATACGDDAIRV 278
Query: 185 F------DVTRAKF--LHHL-EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
F D + F HL + H V + ++P + +L S SDD V ++
Sbjct: 279 FEEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEAGLLASCSDDGEVAFWE 332
Score = 144 (55.7 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 48/159 (30%), Positives = 77/159 (48%)
Query: 164 VAWSPDGRRIA-CGSMDGTISVFDVTRAKFLHHL---EGHFMPVRSLVYSPVDPRVLFSA 219
+AW+P G +A CG D I ++ ++ EGH VR + +SP L SA
Sbjct: 22 LAWNPTGTLLASCGG-DRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCG-NYLASA 79
Query: 220 SDD--THVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA 277
S D T + + + VT + GH + V SV +P G + T S D++V +W+++
Sbjct: 80 SFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE 139
Query: 278 MQ--SMTN-HTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ S+ N HT V V + P + S S D ++ LY+
Sbjct: 140 YECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQ 178
Score = 142 (55.0 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 58/187 (31%), Positives = 84/187 (44%)
Query: 7 KSV-ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRP--DDMQLERTNTGHCLGV 63
KSV H+ +V V W P L + S D T +W+ DD + T GH V
Sbjct: 53 KSVLSEGHQRTVRKVAWSPCGN----YLASASFDATTCIWKKNQDDFECVTTLEGHENEV 108
Query: 64 VSVAAHPSGIIAASASLDSFVRVFDVDTNAS---IATLEASPSEVWQMQFDPKGTTLAVA 120
SVA PSG + A+ S D V V++VD ++ L + +V + + P LA A
Sbjct: 109 KSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASA 168
Query: 121 GGGSASVKLWDTA--TWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSM 178
+VKL+ W ATL EG + T V S+A+ P G+R+A S
Sbjct: 169 SYDD-TVKLYQEEGDDWVCCATL-----EGHEST--------VWSIAFDPSGQRLASCSD 214
Query: 179 DGTISVF 185
D T+ ++
Sbjct: 215 DRTVRIW 221
Score = 51 (23.0 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 22/96 (22%), Positives = 39/96 (40%)
Query: 229 DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQ----SMTNH 284
D K + T H + V A+ T D +++++ + + Q S+T H
Sbjct: 238 DPSWKCVCTLSGFHTRTIYDVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAH 297
Query: 285 TDQVWG-----VSFRPL-GGRVVSVSDDKSISLYEY 314
Q V++ P G + S SDD ++ +EY
Sbjct: 298 LRQAHSQDVNCVAWNPKEAGLLASCSDDGEVAFWEY 333
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 214 (80.4 bits), Expect = 6.8e-15, P = 6.8e-15
Identities = 65/259 (25%), Positives = 121/259 (46%)
Query: 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNAS----IATLEASPSEVWQMQFDPK 113
GH ++S+ G + A+ + D VRV+ +D ++ +A + V +
Sbjct: 384 GHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRM 443
Query: 114 GTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI 173
V+G +VK+WD + + + + T+++ K V SV SP+ + +
Sbjct: 444 KQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKA---RSTERAHEKD-VNSVCVSPNDKLL 499
Query: 174 ACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGK 233
A GS D T ++ ++ + L GH V S+ +SPVD ++L SAS D V ++ +
Sbjct: 500 ASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVD-QILGSASADGSVRIWSIQDF 558
Query: 234 SLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSF 293
S + GH + VL + G + + SD VKLW + ++++ H D+VW +
Sbjct: 559 SCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNECVRTLDAHQDKVWALHG 618
Query: 294 RPLGGRVVSVSDDKSISLY 312
+V+ S D +I+++
Sbjct: 619 GCRDELMVTGSADSTITVW 637
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 49/135 (36%), Positives = 67/135 (49%)
Query: 7 KSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV 66
+S E AHE+ V +V P + LL +GS D T KLW D++L GH GV SV
Sbjct: 477 RSTERAHEKDVNSVCVSPNDK----LLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSV 532
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
P I SAS D VR++ + + + T E + V ++ F +GT L V+ G
Sbjct: 533 QFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQL-VSSGSDGL 591
Query: 127 VKLWDTATWNLIATL 141
VKLW T + TL
Sbjct: 592 VKLWTIKTNECVRTL 606
Score = 148 (57.2 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 37/132 (28%), Positives = 66/132 (50%)
Query: 161 VLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRV-LFSA 219
V S+++ +A G DGTI ++DV + H+L+G V + + P R+ LFS+
Sbjct: 109 VASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSS 168
Query: 220 SDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQ 279
S D + ++D V + H S V ++ SPDG + + D+ +WDL + +
Sbjct: 169 SSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKR 228
Query: 280 SMTNHTDQVWGV 291
++ + + V GV
Sbjct: 229 TIPVY-EAVEGV 239
Score = 145 (56.1 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 71/301 (23%), Positives = 123/301 (40%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERT-NTGHCLGVVS-VAAHP--SGIIAASASLDSFVRVF 87
LL TG D T+KLW D ++ T N GVV V HP S + S+S D +R++
Sbjct: 120 LLATGGCDGTIKLW--DVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIW 177
Query: 88 DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE 147
D+ ++ + LE+ S V + F P G TL V+ G +WD + T IP E
Sbjct: 178 DLRSSRCVCVLESHYSPVTALAFSPDGHTL-VSSGRDKICSVWDLQEQKVKRT--IPVYE 234
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT--RAKFLHHL---EGHF-- 200
++ S + D + G + V+D + R F L H
Sbjct: 235 AVEGVVLLSGSADYSEMGVKSDALHLVTAGSKGVLRVWDSSSSRCVFTQTLPDASSHTED 294
Query: 201 --------MPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVD-A 251
+ + L+ P R L + + + ++ +Y ++ G+ VL V
Sbjct: 295 EDAEDEERLGLLQLLLLPRTGR-LITVTAEHNILLYQTPTLAVQQQFVGYNDDVLDVKFV 353
Query: 252 SPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISL 311
D I ++ +K+++L+ + Q + HTD + + G + + DKS+ +
Sbjct: 354 GKDDTHIAVATNSSQLKVFELSTNSC-QILHGHTDTILSIDVFRKGSMFATCAKDKSVRV 412
Query: 312 Y 312
+
Sbjct: 413 W 413
Score = 138 (53.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 63/272 (23%), Positives = 113/272 (41%)
Query: 31 ALLLTGSLDETVKLWRPD----DMQLERTNTGHCLGVVSVA-AHPSGIIAASASLDSFVR 85
++ T + D++V++WR D + TGH V S+A + S S D V+
Sbjct: 399 SMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVK 458
Query: 86 VFDVD--TNAS-IATLEASPSE------VWQMQFDPKGTTLAVAGGGSASVKLWDTATWN 136
V+D+ T A + ++A +E V + P LA +G + KLW +
Sbjct: 459 VWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLA-SGSQDRTAKLWALSDLR 517
Query: 137 LIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHL 196
L L + R ++ V SV +SP + + S DG++ ++ + L
Sbjct: 518 L---LGVCR----------GHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTF 564
Query: 197 EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGA 256
EGH V +++ +++ S SD V ++ + V + H V ++
Sbjct: 565 EGHDASVLKIIFVSRGTQLVSSGSDGL-VKLWTIKTNECVRTLDAHQDKVWALHGGCRDE 623
Query: 257 AITTGSSDRTVKLWDLNMR-AAMQSMTNHTDQ 287
+ TGS+D T+ +W +R + T DQ
Sbjct: 624 LMVTGSADSTITVWTDKLRKTVIIKSTKKVDQ 655
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 32/125 (25%), Positives = 57/125 (45%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS 65
L V H VW+V + P + +L + S D +V++W D +T GH V+
Sbjct: 518 LLGVCRGHRRGVWSVQFSPVDQ----ILGSASADGSVRIWSIQDFSCLKTFEGHDASVLK 573
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
+ G S+ D V+++ + TN + TL+A +VW + + L V G +
Sbjct: 574 IIFVSRGTQLVSSGSDGLVKLWTIKTNECVRTLDAHQDKVWALHGGCRDE-LMVTGSADS 632
Query: 126 SVKLW 130
++ +W
Sbjct: 633 TITVW 637
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 54/298 (18%), Positives = 121/298 (40%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD-- 90
L + S D +++W + H V ++A P G S+ D V+D+
Sbjct: 165 LFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQ 224
Query: 91 -TNASIATLEASPSEVW------QMQFDPKGTTLAVAGGGSASV-KLWDTATWNLIATLS 142
+I EA V + K L + GS V ++WD+++ + T +
Sbjct: 225 KVKRTIPVYEAVEGVVLLSGSADYSEMGVKSDALHLVTAGSKGVLRVWDSSSSRCVFTQT 284
Query: 143 IPRPEG-LKPTDKSSSKKF-VLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHF 200
+P + D ++ +L + P R+ + + I ++ G+
Sbjct: 285 LPDASSHTEDEDAEDEERLGLLQLLLLPRTGRLITVTAEHNILLYQTPTLAVQQQFVGYN 344
Query: 201 MPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITT 260
V + + D + A++ + + +++ S + GH +LS+D G+ T
Sbjct: 345 DDVLDVKFVGKDDTHIAVATNSSQLKVFELSTNSC-QILHGHTDTILSIDVFRKGSMFAT 403
Query: 261 GSSDRTVKLWDLNMRAA----MQSMTNHTDQVWGVSFRPLGGR-VVSVSDDKSISLYE 313
+ D++V++W +++ + + T H++ V ++ + + VVS S D ++ +++
Sbjct: 404 CAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWD 461
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 213 (80.0 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 70/264 (26%), Positives = 117/264 (44%)
Query: 17 VWAVTWVPATETRPAL---LLTGSLDETVKLWRPDDMQLE-RTNTGHCLGVVSVAAHPSG 72
VW+VT + + A L+ D+ ++ + E + GH V V+ P
Sbjct: 452 VWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDR 511
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
S+S D +R++ + T + + VW QF P G V+GG +LW T
Sbjct: 512 NYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYF-VSGGHDRVARLWAT 570
Query: 133 ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF 192
+ + + G D + ++ + P+ +A GS D T+ ++DV
Sbjct: 571 DHYQPLRIFA-----G-HLADVTCTR-------FHPNSNYVATGSSDRTVRLWDVLNGNC 617
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS 252
+ GH P+ SL +SP + + L S S D V ++D ++ + GH + ++ S
Sbjct: 618 VRIFTGHKGPIHSLAFSP-NGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFS 676
Query: 253 PDGAAITTGSSDRTVKLWDLNMRA 276
DG I +GS D TV+LWD+ MRA
Sbjct: 677 RDGEIIASGSIDNTVRLWDV-MRA 699
Score = 157 (60.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 53/233 (22%), Positives = 93/233 (39%)
Query: 81 DSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIAT 140
D R+ D T++ L V+ + F P L ++ +++LW T+ +
Sbjct: 478 DVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYL-LSSSEDGTIRLWSLQTFTCLV- 535
Query: 141 LSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHF 200
G K + V +SP G G D ++ + L GH
Sbjct: 536 -------GYKGHNYP-----VWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHL 583
Query: 201 MPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITT 260
V + P V +SD T V ++D + V +GH + S+ SP+G + +
Sbjct: 584 ADVTCTRFHPNSNYVATGSSDRT-VRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLAS 642
Query: 261 GSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
GS+D V LWD+ + + HT ++ + F G + S S D ++ L++
Sbjct: 643 GSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWD 695
Score = 156 (60.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 51/178 (28%), Positives = 73/178 (41%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H VW + P ++G D +LW D Q R GH V HP+
Sbjct: 540 HNYPVWDTQFSPFGY----YFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNS 595
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
A+ S D VR++DV + + + F P G LA +G V LWD
Sbjct: 596 NYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLA-SGSTDGRVLLWDI 654
Query: 133 ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRA 190
+IA L +G T + ++ +S DG IA GS+D T+ ++DV RA
Sbjct: 655 GHGLMIAEL-----KGHTGT--------IYALKFSRDGEIIASGSIDNTVRLWDVMRA 699
Score = 136 (52.9 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 43/150 (28%), Positives = 62/150 (41%)
Query: 163 SVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
+V ++ D IA G D T+ V+ VT K +R V S D ++ SDD
Sbjct: 431 AVDFTDDSSLIAGGFADSTVRVWSVTPKK-----------LRK-VKSAADLNLIDKESDD 478
Query: 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMT 282
+ D + S + GH+ V V SPD + + S D T++LW L +
Sbjct: 479 VLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYK 538
Query: 283 NHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
H VW F P G VS D+ L+
Sbjct: 539 GHNYPVWDTQFSPFGYYFVSGGHDRVARLW 568
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 204 (76.9 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 64/251 (25%), Positives = 115/251 (45%)
Query: 34 LTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA 93
L+ S D+T++LW + + GH V+SV+ P S S D ++++++ N
Sbjct: 79 LSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNC 138
Query: 94 SIATLEASPSEVWQ--MQFDPKGTTLA-VAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
+ S+ W ++F P L V+ G +VK+WD T++L
Sbjct: 139 KYTITDGGHSD-WVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSL------------- 184
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
T +V +V SPDG A G DGT+ ++D+ + L+ LE + +LV+SP
Sbjct: 185 RTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAK-ANINALVFSP 243
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAMS------GHASW---VLSVDASPDGAAITTG 261
R A+ + + ++D E + V ++ G S +S+ SPDG + +G
Sbjct: 244 --NRYWLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPECISLTWSPDGQTLFSG 301
Query: 262 SSDRTVKLWDL 272
+D +++W +
Sbjct: 302 WTDNLIRVWQV 312
Score = 186 (70.5 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 69/245 (28%), Positives = 112/245 (45%)
Query: 47 PDDMQLERTNTGHCLGVVSVAAHPSGI-IAASASLDSFVRVFDV---DTNASIATLEASP 102
P+ + L T GH V S++ P I S S D + ++++ D N +A +
Sbjct: 2 PEQLVLRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTG 61
Query: 103 SEVW----QMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSK 158
+ + FD + A++ +++LWD + + E +S
Sbjct: 62 HSHFVSDCALSFD---SHYALSASWDKTIRLWD-----------LEKGECTHQFVGHTSD 107
Query: 159 KFVLSVAWSPDGRRIACGSMDGTISVFDVT-RAKFLHHLEGHFMPVRSLVYSPVDPRVLF 217
VLSV+ SPD R++ GS D TI ++++ K+ GH V + +SP + F
Sbjct: 108 --VLSVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTF 165
Query: 218 -SASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRA 276
SA D V ++D E SL T+ GH +V +V SPDG+ +G D T+ LWDLN
Sbjct: 166 VSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNEST 225
Query: 277 AMQSM 281
+ S+
Sbjct: 226 HLYSL 230
Score = 183 (69.5 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 61/221 (27%), Positives = 91/221 (41%)
Query: 96 ATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKS 155
ATLE V + P+ + ++G S+ LW NL+ G+ +
Sbjct: 9 ATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILW-----NLVRD---DVNYGVAQRRLT 60
Query: 156 SSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRV 215
FV A S D S D TI ++D+ + + H GH V S+ SP D R
Sbjct: 61 GHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISP-DNRQ 119
Query: 216 LFSASDDTHVHMYDAEGKSLVTAMSG-HASWVLSVDASP--DGAAITTGSSDRTVKLWDL 272
+ S S D + +++ G T G H+ WV V SP D + D+ VK+WDL
Sbjct: 120 VVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDL 179
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ S HT V V+ P G S D ++ L++
Sbjct: 180 ETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWD 220
Score = 167 (63.8 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 46/180 (25%), Positives = 85/180 (47%)
Query: 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAH 69
+ H + V V + P + ++ D+ VK+W + L ++ GH V +V
Sbjct: 144 DGGHSDWVSCVRFSPNPDN--LTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTIS 201
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
P G + AS D + ++D++ + + +LEA + + + F P L A G +S+++
Sbjct: 202 PDGSLCASGGRDGTLMLWDLNESTHLYSLEAK-ANINALVFSPNRYWLCAATG--SSIRI 258
Query: 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR 189
+D T + L++ K SS+ +S+ WSPDG+ + G D I V+ VT+
Sbjct: 259 FDLETQEKVDELTVD----FVGVGKKSSEPECISLTWSPDGQTLFSGWTDNLIRVWQVTK 314
Score = 143 (55.4 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 66/284 (23%), Positives = 119/284 (41%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWR--PDDMQL---ERTNTGHC 60
L++ H S W + A E P +LL+GS D+++ LW DD+ +R TGH
Sbjct: 7 LRATLEGH--SGWVTSLSTAPEN-PDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHS 63
Query: 61 LGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVA 120
V A A SAS D +R++D++ S+V + P + V+
Sbjct: 64 HFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQV-VS 122
Query: 121 GGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG 180
G ++K+W N+I +G +D S +F + +PD D
Sbjct: 123 GSRDKTIKIW-----NIIGNCKYTITDG-GHSDWVSCVRF----SPNPDNLTFVSAGWDK 172
Query: 181 TISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS 240
+ V+D+ GH V ++ SP D + S D + ++D + + ++
Sbjct: 173 AVKVWDLETFSLRTSHYGHTGYVSAVTISP-DGSLCASGGRDGTLMLWDLNESTHLYSLE 231
Query: 241 GHASWVLSVDASPDG--AAITTGSSDRTVKLWDLNMRAAMQSMT 282
A+ + ++ SP+ TGSS ++++DL + + +T
Sbjct: 232 AKAN-INALVFSPNRYWLCAATGSS---IRIFDLETQEKVDELT 271
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 202 (76.2 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 54/221 (24%), Positives = 104/221 (47%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
TL ++++ M + + L V+ + +WD+ T N + + + +SS
Sbjct: 6 TLRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIPL----------RSS 54
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDV-TR---AKFLHHLEGHFMPVRSLVYSPVD 212
+V++ A++P G +ACG +D S++ + TR + L GH + + +D
Sbjct: 55 ---WVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF--LD 109
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ ++S DT ++D E +GH+ V+S+ +PDG +G+ D ++KLWD+
Sbjct: 110 DNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDV 169
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
Q+ H + V+F P G + SDD + L++
Sbjct: 170 RDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFD 210
Score = 167 (63.8 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 60/259 (23%), Positives = 112/259 (43%)
Query: 21 TWVPATETRPA--LLLTGSLDETVKLW----RPDDMQLERTNTGHCLGVVSVAAHPSGII 74
+WV P+ + G LD ++ R ++++ R GH G +S
Sbjct: 54 SWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHT-GYLSCCRFLDDNQ 112
Query: 75 AASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT 134
++S D+ ++D++T +V + P G T V+G AS+KLWD
Sbjct: 113 IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTF-VSGACDASIKLWDVRD 171
Query: 135 WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK--F 192
S+ R + + + +VA+ P+G GS D T +FD+ +
Sbjct: 172 -------SMCRQTFI------GHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL 218
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS 252
++ + + S+ +S R+L + DD + +++DA ++GH + V + +
Sbjct: 219 MYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVT 277
Query: 253 PDGAAITTGSSDRTVKLWD 271
DG A+ TGS D +K+W+
Sbjct: 278 DDGMAVATGSWDSFLKIWN 296
Score = 138 (53.6 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 66/309 (21%), Positives = 120/309 (38%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLG-----VVSVA 67
H ++A+ W T++R LL++ S D + +W D TN H + V++ A
Sbjct: 10 HLAKIYAMHW--GTDSR--LLVSASQDGKLIIW--DSYT---TNKVHAIPLRSSWVMTCA 60
Query: 68 AHPSGIIAASASLDSFVRVFDVDTN-ASIATLEASPSEVWQMQFDP-KGTTLAVAGGGSA 125
PSG A LD+ ++ + T ++ P + + G
Sbjct: 61 YAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT 120
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
+ LWD T T+ G D V+S++ +PDGR G+ D +I ++
Sbjct: 121 TCALWDIETGQ--QTVGFAGHSG----D-------VMSLSLAPDGRTFVSGACDASIKLW 167
Query: 186 DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD--AEGKSLVTAMSGHA 243
DV + GH + ++ + P + + SDD ++D A+ + L+ +
Sbjct: 168 DVRDSMCRQTFIGHESDINAVAFFP-NGYAFTTGSDDATCRLFDLRADQELLMYSHDNII 226
Query: 244 SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSV 303
+ SV S G + G D +WD + H ++V + G V +
Sbjct: 227 CGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATG 286
Query: 304 SDDKSISLY 312
S D + ++
Sbjct: 287 SWDSFLKIW 295
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 208 (78.3 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 79/323 (24%), Positives = 142/323 (43%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H S+ V + P AL+++ S D T+++W + + ER+ GH V VA G
Sbjct: 107 HRASITRVIFHPIF----ALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQG 162
Query: 73 IIAASASLDSFVRVFDVDTNAS-IATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWD 131
+ AS S D ++++D + I T+ V + F P G + ++ ++K+W+
Sbjct: 163 KLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYV-LSASRDRTIKMWE 221
Query: 132 TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK 191
AT + T + +++V V +G A S D TI V+ +T +K
Sbjct: 222 VATGYCVKTYT-------------GHREWVRMVRVHIEGSIFATCSNDQTIRVW-LTNSK 267
Query: 192 FLH-HLEGHFMPVRSLVYSP------------VDPR-------VLFSASDDTHVHMYDAE 231
L H V + ++P D + L S S D + ++D
Sbjct: 268 DCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVS 327
Query: 232 -GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWG 290
G L+T +SGH +WV + P G + + S D+T+++WDL + M+++ H
Sbjct: 328 VGLCLLT-LSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTS 386
Query: 291 VSFRPLGGRVVSVSDDKSISLYE 313
+ F V+S S D+++ ++E
Sbjct: 387 IDFHKAHPYVISGSVDQTVKVWE 409
Score = 194 (73.4 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 69/269 (25%), Positives = 120/269 (44%)
Query: 57 TGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTT 116
TGH + V HP + SAS D+ +R++D +T +L+ V + FD +G
Sbjct: 105 TGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKL 164
Query: 117 LAVAGGGSASVKLWD-TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGR--RI 173
LA S+KLWD ++ I T+ + + +VLS + + +
Sbjct: 165 LASCSA-DLSIKLWDFQQSYECIKTMH-GHDHNVSSVAFVPAGDYVLSASRDRTIKMWEV 222
Query: 174 ACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG- 232
A G T + H+EG S + RV + S D V + D E
Sbjct: 223 ATGYCVKTYTGHREWVRMVRVHIEGSIFATCS---NDQTIRVWLTNSKDCKVELRDHEHT 279
Query: 233 -KSLVTAMSGHASWVLSVDASPD-------GAAITTGSSDRTVKLWDLNMRAAMQSMTNH 284
+ + A AS ++ A D G + +GS D+T+++WD+++ + +++ H
Sbjct: 280 VECIAWAPEAAAS-AINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGH 338
Query: 285 TDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ V G++F P G +VS SDDK+I +++
Sbjct: 339 DNWVRGLAFHPGGKYLVSASDDKTIRVWD 367
Score = 153 (58.9 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 34/119 (28%), Positives = 61/119 (51%)
Query: 196 LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDG 255
L GH + +++ P+ ++ SAS+D + ++D E ++ GH V V G
Sbjct: 104 LTGHRASITRVIFHPIFA-LMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQG 162
Query: 256 AAITTGSSDRTVKLWDLNMR-AAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ + S+D ++KLWD +++M H V V+F P G V+S S D++I ++E
Sbjct: 163 KLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWE 221
Score = 135 (52.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 55/219 (25%), Positives = 91/219 (41%)
Query: 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHP 70
+ H+ +V +V +VPA + +L+ S D T+K+W +T TGH V V H
Sbjct: 190 HGHDHNVSSVAFVPAGD----YVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHI 245
Query: 71 SGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLW 130
G I A+ S D +RV+ ++ L V + + P+ A+ A K
Sbjct: 246 EGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKG 305
Query: 131 D-----TATWNLIATLSI-PRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISV 184
A+ + T+ I GL S +V +A+ P G+ + S D TI V
Sbjct: 306 HHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRV 365
Query: 185 FDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 223
+D+ + + L H S+ + P V+ + D T
Sbjct: 366 WDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQT 404
Score = 113 (44.8 bits), Expect = 0.00097, P = 0.00097
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 238 AMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLG 297
+++GH + + V P A + + S D T+++WD +S+ HTD V V+F G
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQG 162
Query: 298 GRVVSVSDDKSISLYEY 314
+ S S D SI L+++
Sbjct: 163 KLLASCSADLSIKLWDF 179
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 210 (79.0 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 81/332 (24%), Positives = 145/332 (43%)
Query: 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTG-------HC 60
+V HE V+ W P ++ LL +GS D T ++W + E +N+G HC
Sbjct: 172 TVLRGHESEVFICAWNPVSD----LLASGSGDSTARIWNLN----ENSNSGSTQLVLRHC 223
Query: 61 L--G---------VVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQ 109
+ G V S+ + G + A+ S D F R++ D N + +TL ++ ++
Sbjct: 224 IREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLA-STLGQHKGPIFALK 282
Query: 110 FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169
++ KG + AG ++ +WD T A P P L V W +
Sbjct: 283 WNKKGNYILSAGVDKTTI-IWDAHTGE--AKQQFPFHSA--PA---------LDVDWQNN 328
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
+C S D I V + + + +GH V ++ + P +L S SDD + ++
Sbjct: 329 TTFASC-STDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWS 386
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAA---------ITTGSSDRTVKLWDLNMRAAMQS 280
+ + V + H+ + ++ SP G + + S D TV+LWD++ + +
Sbjct: 387 MKQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHT 446
Query: 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+T H + V+ V+F P G + S S DK + ++
Sbjct: 447 LTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 478
Score = 176 (67.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 68/290 (23%), Positives = 124/290 (42%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL TGS D ++W +D L T H + ++ + G SA +D ++D T
Sbjct: 248 LLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHT 306
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ + + + TT A S S D + L RP +K
Sbjct: 307 GEAKQQFPFHSAPALDVDWQ-NNTTFA-----SCST---DMCIH--VCRLGCDRP--VKT 353
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
+++ V ++ W P G +A S D T+ ++ + + +H L+ H + ++ +SP
Sbjct: 354 FQGHTNE--VNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPT 411
Query: 212 DPR--------VLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSS 263
P +L SAS D+ V ++D + + ++ H V SV SPDG + +GS
Sbjct: 412 GPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSF 471
Query: 264 DRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
D+ V +W+ + S T ++ V + G +V + + D S+ + +
Sbjct: 472 DKCVHIWNTQSGTLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLD 520
Score = 142 (55.0 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 50/186 (26%), Positives = 79/186 (42%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H V A+ W P+ LL + S D T+K+W H + ++ P+G
Sbjct: 357 HTNEVNAIKWDPSG----MLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTG 412
Query: 73 ---------IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGG 123
I+ ASAS DS VR++DVD I TL V+ + F P G LA +G
Sbjct: 413 PGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLA-SGSF 471
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
V +W+T + L+ + R G + V W+ G ++ + DG++
Sbjct: 472 DKCVHIWNTQSGTLVHSY---RGTG-----------GIFEVCWNARGDKVGASASDGSVC 517
Query: 184 VFDVTR 189
V D+ +
Sbjct: 518 VLDLRK 523
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 210 (79.0 bits), Expect = 9.0e-15, P = 9.0e-15
Identities = 82/332 (24%), Positives = 144/332 (43%)
Query: 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTG-------HC 60
+V HE V+ W P ++ LL +GS D T ++W + E +N G HC
Sbjct: 176 TVLRGHESEVFICAWNPVSD----LLASGSGDSTARIWNLN----ENSNGGSTQLVLRHC 227
Query: 61 L--G---------VVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQ 109
+ G V S+ + G + A+ S D F R++ D N + +TL ++ ++
Sbjct: 228 IREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLA-STLGQHKGPIFALK 286
Query: 110 FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169
++ KG + AG ++ +WD T A P P L V W +
Sbjct: 287 WNKKGNYILSAGVDKTTI-IWDAHTGE--AKQQFPFHSA--PA---------LDVDWQNN 332
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
+C S D I V + + + +GH V ++ + P +L S SDD + ++
Sbjct: 333 TTFASC-STDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWS 390
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAA---------ITTGSSDRTVKLWDLNMRAAMQS 280
+ + V + H+ + ++ SP G A + + S D TV+LWD+ + +
Sbjct: 391 MKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHT 450
Query: 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+T H + V+ V+F P G + S S DK + ++
Sbjct: 451 LTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 482
Score = 181 (68.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 69/290 (23%), Positives = 125/290 (43%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL TGS D ++W +D L T H + ++ + G SA +D ++D T
Sbjct: 252 LLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHT 310
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ + + + TT A S S D + L RP +K
Sbjct: 311 GEAKQQFPFHSAPALDVDWQ-NNTTFA-----SCST---DMCIH--VCRLGCDRP--VKT 357
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
+++ V ++ W P G +A S D T+ ++ + + +H L+ H + ++ +SP
Sbjct: 358 FQGHTNE--VNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPT 415
Query: 212 DPR--------VLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSS 263
P +L SAS D+ V ++D E + ++ H V SV SPDG + +GS
Sbjct: 416 GPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSF 475
Query: 264 DRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
D+ V +W+ + + S T ++ V + G +V + + D S+ + +
Sbjct: 476 DKCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLD 524
Score = 139 (54.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 49/186 (26%), Positives = 80/186 (43%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H V A+ W P+ LL + S D T+K+W H + ++ P+G
Sbjct: 361 HTNEVNAIKWDPSG----MLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTG 416
Query: 73 ---------IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGG 123
I+ ASAS DS VR++DV+ I TL V+ + F P G LA +G
Sbjct: 417 PATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLA-SGSF 475
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
V +W+T + +L+ + R G + V W+ G ++ + DG++
Sbjct: 476 DKCVHIWNTQSGSLVHSY---RGTG-----------GIFEVCWNARGDKVGASASDGSVC 521
Query: 184 VFDVTR 189
V D+ +
Sbjct: 522 VLDLRK 527
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 210 (79.0 bits), Expect = 9.0e-15, P = 9.0e-15
Identities = 82/332 (24%), Positives = 144/332 (43%)
Query: 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTG-------HC 60
+V HE V+ W P ++ LL +GS D T ++W + E +N G HC
Sbjct: 176 TVLRGHESEVFICAWNPVSD----LLASGSGDSTARIWNLN----ENSNGGSTQLVLRHC 227
Query: 61 L--G---------VVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQ 109
+ G V S+ + G + A+ S D F R++ D N + +TL ++ ++
Sbjct: 228 IREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLA-STLGQHKGPIFALK 286
Query: 110 FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169
++ KG + AG ++ +WD T A P P L V W +
Sbjct: 287 WNKKGNYILSAGVDKTTI-IWDAHTGE--AKQQFPFHSA--PA---------LDVDWQNN 332
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
+C S D I V + + + +GH V ++ + P +L S SDD + ++
Sbjct: 333 TTFASC-STDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWS 390
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAA---------ITTGSSDRTVKLWDLNMRAAMQS 280
+ + V + H+ + ++ SP G A + + S D TV+LWD+ + +
Sbjct: 391 MKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHT 450
Query: 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+T H + V+ V+F P G + S S DK + ++
Sbjct: 451 LTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 482
Score = 181 (68.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 69/290 (23%), Positives = 125/290 (43%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
LL TGS D ++W +D L T H + ++ + G SA +D ++D T
Sbjct: 252 LLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHT 310
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ + + + TT A S S D + L RP +K
Sbjct: 311 GEAKQQFPFHSAPALDVDWQ-NNTTFA-----SCST---DMCIH--VCRLGCDRP--VKT 357
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
+++ V ++ W P G +A S D T+ ++ + + +H L+ H + ++ +SP
Sbjct: 358 FQGHTNE--VNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPT 415
Query: 212 DPR--------VLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSS 263
P +L SAS D+ V ++D E + ++ H V SV SPDG + +GS
Sbjct: 416 GPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSF 475
Query: 264 DRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
D+ V +W+ + + S T ++ V + G +V + + D S+ + +
Sbjct: 476 DKCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLD 524
Score = 139 (54.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 49/186 (26%), Positives = 80/186 (43%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H V A+ W P+ LL + S D T+K+W H + ++ P+G
Sbjct: 361 HTNEVNAIKWDPSG----MLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTG 416
Query: 73 ---------IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGG 123
I+ ASAS DS VR++DV+ I TL V+ + F P G LA +G
Sbjct: 417 PATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLA-SGSF 475
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
V +W+T + +L+ + R G + V W+ G ++ + DG++
Sbjct: 476 DKCVHIWNTQSGSLVHSY---RGTG-----------GIFEVCWNARGDKVGASASDGSVC 521
Query: 184 VFDVTR 189
V D+ +
Sbjct: 522 VLDLRK 527
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 206 (77.6 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 67/220 (30%), Positives = 109/220 (49%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++GS D TVK+W D L T GH V +A +G I + S D+ +RV+DV++
Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESG 368
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ATL + V +QFD GTT+ V+GG +VK+W+ T I TL+
Sbjct: 369 RHLATLHGHHAAVRCVQFD--GTTV-VSGGYDFTVKIWNAHTGRCIRTLT---------- 415
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK---FLHHLEGHFMPVRSLVYS 209
V S+ + + + GS+D +I V+D TR + + L+GH +
Sbjct: 416 ---GHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGM--- 469
Query: 210 PVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSV 249
+ +L S + D+HV ++D + V +SGH S + S+
Sbjct: 470 QLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSL 509
Score = 184 (69.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 46/147 (31%), Positives = 77/147 (52%)
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
GR I GS D T+ V+ LH L+GH VR + + +L + S DT + ++D
Sbjct: 308 GRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG---SILVTGSRDTTLRVWD 364
Query: 230 AE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQV 288
E G+ L T + GH + V V DG + +G D TVK+W+ + ++++T H ++V
Sbjct: 365 VESGRHLAT-LHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRV 421
Query: 289 WGVSFRPLGGRVVSVSDDKSISLYEYS 315
+ + F V S S D SI +++++
Sbjct: 422 YSLLFESERSIVCSGSLDTSIRVWDFT 448
Score = 145 (56.1 bits), Expect = 9.8e-15, Sum P(2) = 9.8e-15
Identities = 51/172 (29%), Positives = 82/172 (47%)
Query: 114 GTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI 173
GTT+ V+GG +VK+W+ T I TL+ V S+ + + R I
Sbjct: 388 GTTV-VSGGYDFTVKIWNAHTGRCIRTLT-------------GHNNRVYSLLFESE-RSI 432
Query: 174 AC-GSMDGTISVFDVTRAK---FLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
C GS+D +I V+D TR + + L+GH + + +L S + D+HV ++D
Sbjct: 433 VCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGM---QLRGNILVSCNADSHVRVWD 489
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSM 281
+ V +SGH S + S+ + T S D TVKLWD+ A ++ +
Sbjct: 490 IHEGTCVHMLSGHRSAITSLQWFGRNM-VATSSDDGTVKLWDIERGALIRDL 540
Score = 136 (52.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 36/149 (24%), Positives = 73/149 (48%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
DG + G D T+ +++ + + L GH V SL++ + ++ S S DT + ++
Sbjct: 387 DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFES-ERSIVCSGSLDTSIRVW 445
Query: 229 D---AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHT 285
D EG+ V + GH S L+ G + + ++D V++WD++ + ++ H
Sbjct: 446 DFTRPEGQECVALLQGHTS--LTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHR 503
Query: 286 DQVWGVSFRPLGGRVVSVS-DDKSISLYE 313
+ S + G +V+ S DD ++ L++
Sbjct: 504 SAI--TSLQWFGRNMVATSSDDGTVKLWD 530
Score = 125 (49.1 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 38/140 (27%), Positives = 67/140 (47%)
Query: 173 IACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG 232
+ GS D T+ V+ + + + ++ L GH V + S R + S S D V ++
Sbjct: 269 LVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCG-RYIVSGSTDRTVKVWSTVD 327
Query: 233 KSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVS 292
SL+ + GH S V + + G+ + TGS D T+++WD+ + ++ H V V
Sbjct: 328 GSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQ 385
Query: 293 FRPLGGRVVSVSDDKSISLY 312
F G VVS D ++ ++
Sbjct: 386 FD--GTTVVSGGYDFTVKIW 403
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 46/168 (27%), Positives = 73/168 (43%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDV--- 89
+++G D TVK+W + RT TGH V S+ I S SLD+ +RV+D
Sbjct: 391 VVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRP 450
Query: 90 DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGL 149
+ +A L+ S MQ +G L V+ + V++WD + LS
Sbjct: 451 EGQECVALLQGHTSLTSGMQL--RGNIL-VSCNADSHVRVWDIHEGTCVHMLS------- 500
Query: 150 KPTDKSSSKKFVLSVAWSPDGRR-IACGSMDGTISVFDVTRAKFLHHL 196
+ + S+ W GR +A S DGT+ ++D+ R + L
Sbjct: 501 ------GHRSAITSLQWF--GRNMVATSSDDGTVKLWDIERGALIRDL 540
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 41/176 (23%), Positives = 74/176 (42%)
Query: 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90
++L+TGS D T+++W + + T GH V V G S D V++++
Sbjct: 349 SILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAH 406
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
T I TL + V+ + F+ + ++ +G S+++WD RPEG +
Sbjct: 407 TGRCIRTLTGHNNRVYSLLFESE-RSIVCSGSLDTSIRVWD-----------FTRPEGQE 454
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSL 206
+ S ++C + D + V+D+ +H L GH + SL
Sbjct: 455 CVALLQGHTSLTSGMQLRGNILVSCNA-DSHVRVWDIHEGTCVHMLSGHRSAITSL 509
Score = 115 (45.5 bits), Expect = 9.8e-15, Sum P(2) = 9.8e-15
Identities = 38/134 (28%), Positives = 61/134 (45%)
Query: 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVA 67
+V HE+ V + + +L+TGS D T+K+W D ++ T GH GV +
Sbjct: 249 AVLRGHEDHV-----ITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQ 303
Query: 68 AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
G S S D V+V+ + + TL+ S V M G+ L V G ++
Sbjct: 304 ISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSIL-VTGSRDTTL 360
Query: 128 KLWDTATWNLIATL 141
++WD + +ATL
Sbjct: 361 RVWDVESGRHLATL 374
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 206 (77.6 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 67/220 (30%), Positives = 109/220 (49%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++GS D TVK+W D L T GH V +A +G I + S D+ +RV+DV++
Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESG 368
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ATL + V +QFD GTT+ V+GG +VK+W+ T I TL+
Sbjct: 369 RHLATLHGHHAAVRCVQFD--GTTV-VSGGYDFTVKIWNAHTGRCIRTLT---------- 415
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK---FLHHLEGHFMPVRSLVYS 209
V S+ + + + GS+D +I V+D TR + + L+GH +
Sbjct: 416 ---GHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGM--- 469
Query: 210 PVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSV 249
+ +L S + D+HV ++D + V +SGH S + S+
Sbjct: 470 QLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSL 509
Score = 184 (69.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 46/147 (31%), Positives = 77/147 (52%)
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
GR I GS D T+ V+ LH L+GH VR + + +L + S DT + ++D
Sbjct: 308 GRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG---SILVTGSRDTTLRVWD 364
Query: 230 AE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQV 288
E G+ L T + GH + V V DG + +G D TVK+W+ + ++++T H ++V
Sbjct: 365 VESGRHLAT-LHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRV 421
Query: 289 WGVSFRPLGGRVVSVSDDKSISLYEYS 315
+ + F V S S D SI +++++
Sbjct: 422 YSLLFESERSIVCSGSLDTSIRVWDFT 448
Score = 145 (56.1 bits), Expect = 9.8e-15, Sum P(2) = 9.8e-15
Identities = 51/172 (29%), Positives = 82/172 (47%)
Query: 114 GTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI 173
GTT+ V+GG +VK+W+ T I TL+ V S+ + + R I
Sbjct: 388 GTTV-VSGGYDFTVKIWNAHTGRCIRTLT-------------GHNNRVYSLLFESE-RSI 432
Query: 174 AC-GSMDGTISVFDVTRAK---FLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
C GS+D +I V+D TR + + L+GH + + +L S + D+HV ++D
Sbjct: 433 VCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGM---QLRGNILVSCNADSHVRVWD 489
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSM 281
+ V +SGH S + S+ + T S D TVKLWD+ A ++ +
Sbjct: 490 IHEGTCVHMLSGHRSAITSLQWFGRNM-VATSSDDGTVKLWDIERGALIRDL 540
Score = 136 (52.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 36/149 (24%), Positives = 73/149 (48%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
DG + G D T+ +++ + + L GH V SL++ + ++ S S DT + ++
Sbjct: 387 DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFES-ERSIVCSGSLDTSIRVW 445
Query: 229 D---AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHT 285
D EG+ V + GH S L+ G + + ++D V++WD++ + ++ H
Sbjct: 446 DFTRPEGQECVALLQGHTS--LTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHR 503
Query: 286 DQVWGVSFRPLGGRVVSVS-DDKSISLYE 313
+ S + G +V+ S DD ++ L++
Sbjct: 504 SAI--TSLQWFGRNMVATSSDDGTVKLWD 530
Score = 125 (49.1 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 38/140 (27%), Positives = 67/140 (47%)
Query: 173 IACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG 232
+ GS D T+ V+ + + + ++ L GH V + S R + S S D V ++
Sbjct: 269 LVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCG-RYIVSGSTDRTVKVWSTVD 327
Query: 233 KSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVS 292
SL+ + GH S V + + G+ + TGS D T+++WD+ + ++ H V V
Sbjct: 328 GSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQ 385
Query: 293 FRPLGGRVVSVSDDKSISLY 312
F G VVS D ++ ++
Sbjct: 386 FD--GTTVVSGGYDFTVKIW 403
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 46/168 (27%), Positives = 73/168 (43%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDV--- 89
+++G D TVK+W + RT TGH V S+ I S SLD+ +RV+D
Sbjct: 391 VVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRP 450
Query: 90 DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGL 149
+ +A L+ S MQ +G L V+ + V++WD + LS
Sbjct: 451 EGQECVALLQGHTSLTSGMQL--RGNIL-VSCNADSHVRVWDIHEGTCVHMLS------- 500
Query: 150 KPTDKSSSKKFVLSVAWSPDGRR-IACGSMDGTISVFDVTRAKFLHHL 196
+ + S+ W GR +A S DGT+ ++D+ R + L
Sbjct: 501 ------GHRSAITSLQWF--GRNMVATSSDDGTVKLWDIERGALIRDL 540
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 41/176 (23%), Positives = 74/176 (42%)
Query: 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90
++L+TGS D T+++W + + T GH V V G S D V++++
Sbjct: 349 SILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAH 406
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
T I TL + V+ + F+ + ++ +G S+++WD RPEG +
Sbjct: 407 TGRCIRTLTGHNNRVYSLLFESE-RSIVCSGSLDTSIRVWD-----------FTRPEGQE 454
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSL 206
+ S ++C + D + V+D+ +H L GH + SL
Sbjct: 455 CVALLQGHTSLTSGMQLRGNILVSCNA-DSHVRVWDIHEGTCVHMLSGHRSAITSL 509
Score = 115 (45.5 bits), Expect = 9.8e-15, Sum P(2) = 9.8e-15
Identities = 38/134 (28%), Positives = 61/134 (45%)
Query: 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVA 67
+V HE+ V + + +L+TGS D T+K+W D ++ T GH GV +
Sbjct: 249 AVLRGHEDHV-----ITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQ 303
Query: 68 AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
G S S D V+V+ + + TL+ S V M G+ L V G ++
Sbjct: 304 ISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSIL-VTGSRDTTL 360
Query: 128 KLWDTATWNLIATL 141
++WD + +ATL
Sbjct: 361 RVWDVESGRHLATL 374
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 214 (80.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 65/267 (24%), Positives = 123/267 (46%)
Query: 12 AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGH-----CLGVVSV 66
AHE+ V A + + + T S D+ VK+W +L T H C +
Sbjct: 655 AHEDEVLCC----AFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNK 710
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
+ H ++ A+ S D F++++D++ T+ + V +F P LA +
Sbjct: 711 SNH---LLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSA-DGT 766
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSV-AWSPDGRRIACGSMDGTISVF 185
++LWD + N ++++ R L D + ++ +WS DG +I + + + +F
Sbjct: 767 LRLWDVRSANERKSINVKR-FFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVL-LF 824
Query: 186 DVTRAKFLHHLE-GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHAS 244
D+ + L + GH ++ +SP D + + S V +++ + + V GH S
Sbjct: 825 DIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYC-VELWNIDSRLKVADCRGHLS 883
Query: 245 WVLSVDASPDGAAITTGSSDRTVKLWD 271
WV V SPDG++ T S D+T+++W+
Sbjct: 884 WVHGVMFSPDGSSFLTASDDQTIRVWE 910
Score = 151 (58.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 46/156 (29%), Positives = 72/156 (46%)
Query: 161 VLSVAWSPDGRRIA-CGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSA 219
V +S DG+RIA CG+ D T+ VF + L ++ H V +S D + +
Sbjct: 618 VYHACFSQDGQRIASCGA-DKTLQVFKAETGEKLLDIKAHEDEVLCCAFSS-DDSYIATC 675
Query: 220 SDDTHVHMYDAEGKSLVTAMSGHASWV--LSVDASPDGAAITTGSSDRTVKLWDLNMRAA 277
S D V ++D+ LV H+ V + + TGS+D +KLWDLN +
Sbjct: 676 SADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC 735
Query: 278 MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+M HT+ V F P + S S D ++ L++
Sbjct: 736 RNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWD 771
Score = 144 (55.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 68/290 (23%), Positives = 120/290 (41%)
Query: 39 DETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATL 98
D+T+++++ + + H V+ A A+ S D V+++D T + T
Sbjct: 636 DKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTY 695
Query: 99 EASPSEVWQMQFDPKGTTLAVA-GGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSS 157
+ +V F K L +A G +KLWD T+ T+ +
Sbjct: 696 DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTM-------FGHTNSVNH 748
Query: 158 KKFVLSVAWSPDGRRIACGSMDGTISVFDVTRA---KFLH----HLEGHFMP------VR 204
+F SPD +A S DGT+ ++DV A K ++ L P V+
Sbjct: 749 CRF------SPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVK 802
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAM-SGHASWVLSVDASPDGAAITTGSS 263
+S +++ +A + V ++D L+ + +GH S + D SP S
Sbjct: 803 CCSWSADGDKIIVAAKNK--VLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALS 860
Query: 264 DRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
V+LW+++ R + H V GV F P G ++ SDD++I ++E
Sbjct: 861 QYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 214 (80.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 68/271 (25%), Positives = 123/271 (45%)
Query: 5 GLKSVE-NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHC--L 61
G K +E AHE+ V + +T+ R + T S+D+ VK+W L H +
Sbjct: 648 GEKLLEIKAHEDEVLCCAF--STDDR--FIATCSVDKKVKIWNSMTGGLVHVYDEHSEQV 703
Query: 62 GVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAG 121
+ ++ A+AS D F++++D++ T+ + V +F P LA
Sbjct: 704 NCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCS 763
Query: 122 GGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGT 181
++KLWD + N ++++ + + + V +WS DG RI + +
Sbjct: 764 A-DGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKN-K 821
Query: 182 ISVFDVTRAKFLHHLE-GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS 240
I +FD+ L + GH ++ +SP + + + S V +++ + V
Sbjct: 822 IFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQNHLAVVALSQCC-VELWNMDSCLKVADCR 880
Query: 241 GHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
GH SWV V SPDG++ T S D+T++LW+
Sbjct: 881 GHLSWVHCVMFSPDGSSFLTSSDDQTIRLWE 911
Score = 150 (57.9 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 46/156 (29%), Positives = 73/156 (46%)
Query: 161 VLSVAWSPDGRRIA-CGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSA 219
V +S DG+RIA CG +D T+ VF + L ++ H V +S D R + +
Sbjct: 619 VYHACFSEDGQRIASCG-VDKTLQVFKAETGEKLLEIKAHEDEVLCCAFS-TDDRFIATC 676
Query: 220 SDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDG--AAITTGSSDRTVKLWDLNMRAA 277
S D V ++++ LV H+ V + + + T SSD +KLWDLN +
Sbjct: 677 SVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKEC 736
Query: 278 MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+M HT+ V F P + S S D ++ L++
Sbjct: 737 RNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWD 772
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 65/291 (22%), Positives = 118/291 (40%)
Query: 38 LDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIAT 97
+D+T+++++ + + H V+ A A+ S+D V++++ T +
Sbjct: 636 VDKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHV 695
Query: 98 LEASPSEVWQMQFDPKGTTLAVAGGGS-ASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
+ +V F L +A S +KLWD T+ T+ +
Sbjct: 696 YDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTM-------FGHTNSVN 748
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK----------FLHHLEGHF---MPV 203
+F SPD + +A S DGT+ ++DV A FL+ E + V
Sbjct: 749 HCRF------SPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIV 802
Query: 204 RSLVYSPVDPRVLFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGS 262
+ +S R++ +A + + ++D G L +GH S + D SP
Sbjct: 803 KCCSWSADGTRIMVAAKNK--IFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQNHLAVVAL 860
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
S V+LW+++ + H V V F P G ++ SDD++I L+E
Sbjct: 861 SQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWE 911
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 204 (76.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 67/237 (28%), Positives = 111/237 (46%)
Query: 90 DTNASIATLEASP-SEVWQMQFDPKGTTLAVAGGGSASVKLW--DTATWNLIATLSIPRP 146
DT A + A P S W + ++PKGT LA GG A +++W + +W L
Sbjct: 3 DTLALLQKFNAHPDSRCWYVAWNPKGTLLASCGGDRA-IRIWGREGDSWECKTVLQ---- 57
Query: 147 EGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF--LHHLEGHFMPVR 204
+G ++ V VAWSP G +A S D T ++ F L LEGH V+
Sbjct: 58 DG--------HQRAVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVK 109
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKS---LVTAMSGHASWVLSVDASPDGAAITTG 261
+ ++P + L + S D V +++ + + V+ ++ H V V P + +
Sbjct: 110 CVAWAPSGNQ-LATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQELLASC 168
Query: 262 SSDRTVKLW-----DLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
S D V ++ D RA ++ HT VWG++F P G R+ S SDD+++ +++
Sbjct: 169 SYDNNVCVYKEEDDDWECRATLEG---HTSTVWGLTFDPSGQRLASCSDDRTVKIWK 222
Score = 160 (61.4 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 73/251 (29%), Positives = 106/251 (42%)
Query: 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDM-QLERTNT--GHCLGVV 64
+V HE V V W P+ L T S D++V +W D+ + E + H V
Sbjct: 99 TVLEGHENEVKCVAWAPSGNQ----LATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVK 154
Query: 65 SVAAHPSGIIAASASLDSFVRVF--DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGG 122
V HP+ + AS S D+ V V+ + D ATLE S VW + FDP G LA
Sbjct: 155 HVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPSGQRLASCSD 214
Query: 123 GSASVKLW---------DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP-DGR- 171
+VK+W DTA W + TLS G + V +AW P G
Sbjct: 215 -DRTVKIWKECQPGGGQDTA-WKCVCTLS-----GFHG-------RTVYDIAWCPLTGAL 260
Query: 172 RIACGSMDGTISVF------DVTRAKF---LHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
ACG DG + VF D + F H + H V + + P + +L S SD+
Sbjct: 261 ATACGD-DG-VRVFKEDETADPDQPVFSLSAHVPKAHSQDVNCIAWHPKEAGLLVSCSDN 318
Query: 223 THVHMYDAEGK 233
+ +++ + +
Sbjct: 319 GEIAVWNYQSE 329
Score = 156 (60.0 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 84/331 (25%), Positives = 131/331 (39%)
Query: 11 NAHEES-VWAVTWVPATETRPALLLTGSLDETVKLW-RPDDMQLERT--NTGHCLGVVSV 66
NAH +S W V W P + LL + D +++W R D +T GH V V
Sbjct: 12 NAHPDSRCWYVAWNP----KGTLLASCGGDRAIRIWGREGDSWECKTVLQDGHQRAVRKV 67
Query: 67 AAHPSGIIAASASLDSFVRVFDV--DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGS 124
A P G ASAS D+ ++ D + LE +EV + + P G LA
Sbjct: 68 AWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNQLATCSRDK 127
Query: 125 ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISV 184
SV +W+ + +S+ +S + V V W P +A S D + V
Sbjct: 128 -SVWIWEVDEEDEYECVSVV----------NSHTQDVKHVVWHPTQELLASCSYDNNVCV 176
Query: 185 FDVTRAKFLHH--LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY---------DAEGK 233
+ + LEGH V L + P R L S SDD V ++ D K
Sbjct: 177 YKEEDDDWECRATLEGHTSTVWGLTFDPSGQR-LASCSDDRTVKIWKECQPGGGQDTAWK 235
Query: 234 SLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRA----AMQSMTNHTDQVW 289
+ T H V + P A+ T D V+++ + A + S++ H +
Sbjct: 236 CVCTLSGFHGRTVYDIAWCPLTGALATACGDDGVRVFKEDETADPDQPVFSLSAHVPKAH 295
Query: 290 G-----VSFRPL-GGRVVSVSDDKSISLYEY 314
+++ P G +VS SD+ I+++ Y
Sbjct: 296 SQDVNCIAWHPKEAGLLVSCSDNGEIAVWNY 326
Score = 112 (44.5 bits), Expect = 0.00087, P = 0.00087
Identities = 68/287 (23%), Positives = 111/287 (38%)
Query: 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRP--DDMQLERTNTGHCLGVVSV 66
+++ H+ +V V W P L + S D T +W+ DD + GH V V
Sbjct: 56 LQDGHQRAVRKVAWSPCGN----YLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCV 111
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNAS---IATLEASPSEVWQMQFDPKGTTLAVAG-G 122
A PSG A+ S D V +++VD ++ + + +V + + P LA
Sbjct: 112 AWAPSGNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQELLASCSYD 171
Query: 123 GSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTI 182
+ V + W ATL EG T V + + P G+R+A S D T+
Sbjct: 172 NNVCVYKEEDDDWECRATL-----EGHTST--------VWGLTFDPSGQRLASCSDDRTV 218
Query: 183 SVFDV--------TRAKFLHHLEG-HFMPVRSLVYSPVDPRVLFSASDD-THVHMYD--A 230
++ T K + L G H V + + P+ + + DD V D A
Sbjct: 219 KIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLTGALATACGDDGVRVFKEDETA 278
Query: 231 EGKSLVTAMSGHASWVLSVDAS-----PDGAAITTGSSDR-TVKLWD 271
+ V ++S H S D + P A + SD + +W+
Sbjct: 279 DPDQPVFSLSAHVPKAHSQDVNCIAWHPKEAGLLVSCSDNGEIAVWN 325
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 214 (80.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 68/271 (25%), Positives = 123/271 (45%)
Query: 5 GLKSVE-NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHC--L 61
G K +E AHE+ V + +T+ R + T S+D+ VK+W L H +
Sbjct: 655 GEKLLEIKAHEDEVLCCAF--STDDR--FIATCSVDKKVKIWNSMTGGLVHVYDEHSEQV 710
Query: 62 GVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAG 121
+ ++ A+AS D F++++D++ T+ + V +F P LA
Sbjct: 711 NCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCS 770
Query: 122 GGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGT 181
++KLWD + N ++++ + + + V +WS DG RI + +
Sbjct: 771 A-DGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKN-K 828
Query: 182 ISVFDVTRAKFLHHLE-GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS 240
I +FD+ L + GH ++ +SP + + + S V +++ + V
Sbjct: 829 IFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQNHLAVVALSQCC-VELWNMDSCLKVADCR 887
Query: 241 GHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
GH SWV V SPDG++ T S D+T++LW+
Sbjct: 888 GHLSWVHCVMFSPDGSSFLTSSDDQTIRLWE 918
Score = 150 (57.9 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 46/156 (29%), Positives = 73/156 (46%)
Query: 161 VLSVAWSPDGRRIA-CGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSA 219
V +S DG+RIA CG +D T+ VF + L ++ H V +S D R + +
Sbjct: 626 VYHACFSEDGQRIASCG-VDKTLQVFKAETGEKLLEIKAHEDEVLCCAFS-TDDRFIATC 683
Query: 220 SDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDG--AAITTGSSDRTVKLWDLNMRAA 277
S D V ++++ LV H+ V + + + T SSD +KLWDLN +
Sbjct: 684 SVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKEC 743
Query: 278 MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+M HT+ V F P + S S D ++ L++
Sbjct: 744 RNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWD 779
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 65/291 (22%), Positives = 118/291 (40%)
Query: 38 LDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIAT 97
+D+T+++++ + + H V+ A A+ S+D V++++ T +
Sbjct: 643 VDKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHV 702
Query: 98 LEASPSEVWQMQFDPKGTTLAVAGGGS-ASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
+ +V F L +A S +KLWD T+ T+ +
Sbjct: 703 YDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTM-------FGHTNSVN 755
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK----------FLHHLEGHF---MPV 203
+F SPD + +A S DGT+ ++DV A FL+ E + V
Sbjct: 756 HCRF------SPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIV 809
Query: 204 RSLVYSPVDPRVLFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGS 262
+ +S R++ +A + + ++D G L +GH S + D SP
Sbjct: 810 KCCSWSADGTRIMVAAKNK--IFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQNHLAVVAL 867
Query: 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
S V+LW+++ + H V V F P G ++ SDD++I L+E
Sbjct: 868 SQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWE 918
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 189 (71.6 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 42/156 (26%), Positives = 77/156 (49%)
Query: 162 LSVAWSPDGRRIACGSMDGTISVFDV-TR---AKFLHHLEGHFMPVRSLVYSPVDPRVLF 217
++ A++P G +ACG +D S++ + TR + L GH + + +D +
Sbjct: 1 MTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF--LDDNQII 58
Query: 218 SASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA 277
++S DT ++D E +GH+ V+S+ +PDG +G+ D ++KLWD+
Sbjct: 59 TSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMC 118
Query: 278 MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
Q+ H + V+F P G + SDD + L++
Sbjct: 119 RQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFD 154
Score = 162 (62.1 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 57/242 (23%), Positives = 106/242 (43%)
Query: 36 GSLDETVKLW----RPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
G LD ++ R ++++ R GH G +S ++S D+ ++D++T
Sbjct: 15 GGLDNICSIYSLKTREGNVRVSRELPGHT-GYLSCCRFLDDNQIITSSGDTTCALWDIET 73
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+V + P G T V+G AS+KLWD S+ R +
Sbjct: 74 GQQTVGFAGHSGDVMSLSLAPDGRTF-VSGACDASIKLWDVRD-------SMCRQTFI-- 123
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK--FLHHLEGHFMPVRSLVYS 209
+ + +VA+ P+G GS D T +FD+ + ++ + + S+ +S
Sbjct: 124 ----GHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFS 179
Query: 210 PVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKL 269
R+L + DD + +++DA ++GH + V + + DG A+ TGS D +K+
Sbjct: 180 R-SGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 238
Query: 270 WD 271
W+
Sbjct: 239 WN 240
Score = 139 (54.0 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 47/181 (25%), Positives = 81/181 (44%)
Query: 136 NLIATLSIPRPEG-LKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLH 194
N+ + S+ EG ++ + + LS D +I S D T +++D+ +
Sbjct: 19 NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTV 78
Query: 195 HLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPD 254
GH V SL +P D R S + D + ++D GH S + +V P+
Sbjct: 79 GFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPN 137
Query: 255 GAAITTGSSDRTVKLWDL--NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
G A TTGS D T +L+DL + M S N + V+F G +++ DD + +++
Sbjct: 138 GYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIW 197
Query: 313 E 313
+
Sbjct: 198 D 198
Score = 116 (45.9 bits), Expect = 0.00015, P = 0.00015
Identities = 51/253 (20%), Positives = 95/253 (37%)
Query: 64 VSVAAHPSGIIAASASLDSFVRVFDVDTN-ASIATLEASPSEVWQMQFDP-KGTTLAVAG 121
++ A PSG A LD+ ++ + T ++ P + +
Sbjct: 1 MTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITS 60
Query: 122 GGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGT 181
G + LWD T T+ G D V+S++ +PDGR G+ D +
Sbjct: 61 SGDTTCALWDIETGQ--QTVGFAGHSG----D-------VMSLSLAPDGRTFVSGACDAS 107
Query: 182 ISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD--AEGKSLVTAM 239
I ++DV + GH + ++ + P + + SDD ++D A+ + L+ +
Sbjct: 108 IKLWDVRDSMCRQTFIGHESDINAVAFFP-NGYAFTTGSDDATCRLFDLRADQELLMYSH 166
Query: 240 SGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGR 299
+ SV S G + G D +WD + H ++V + G
Sbjct: 167 DNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMA 226
Query: 300 VVSVSDDKSISLY 312
V + S D + ++
Sbjct: 227 VATGSWDSFLKIW 239
>UNIPROTKB|B8ZZF2 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511 EMBL:AC008277
HGNC:HGNC:26697 IPI:IPI00915918 ProteinModelPortal:B8ZZF2
SMR:B8ZZF2 Ensembl:ENST00000409124 ArrayExpress:B8ZZF2 Bgee:B8ZZF2
Uniprot:B8ZZF2
Length = 429
Score = 207 (77.9 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 84/304 (27%), Positives = 139/304 (45%)
Query: 31 ALLLTGSLDETVKLWRPDDM-QLERTNTG-HCLGVVSVAAHPSGIIAASASLDSFVRVFD 88
+LL T SLD+T++L+ D +L + H V PSG I AS S D +++
Sbjct: 23 SLLATCSLDKTIRLYSLRDFTELPHSPLKFHTYAVHCCCFSPSGHILASCSTDGTTVLWN 82
Query: 89 VDTNASIATLEA-SPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE 147
+ +A +E S S V QF P T LA +G +V LW+ ++ L S+
Sbjct: 83 TENGQMLAVMEQPSGSPVRVCQFSPDSTCLA-SGAADGTVVLWNAQSYKLYRCGSV---- 137
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLV 207
K S + + A+SP+G GS G ++V+D + + H + H + +
Sbjct: 138 ------KDGS---LAACAFSPNGSFFVTGSSCGDLTVWD-DKMRCPHSEKAHDLGITCCD 187
Query: 208 YS--PVDPRV-------LFSASDDTHV--------HMYDAEGKSLVTAMSGHASWVLSVD 250
+S PV L S D V H+ E K T +SGH + VL+
Sbjct: 188 FSSQPVSDGEQGLQFFRLASCGQDCQVKIWIVSFTHILGFELKYKST-LSGHCAPVLACA 246
Query: 251 ASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSIS 310
S DG + +GS D++V ++D N + ++T HT V +F P + + S DK+++
Sbjct: 247 FSHDGQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVTTCAFAPNTLLLATGSMDKTVN 306
Query: 311 LYEY 314
++++
Sbjct: 307 IWQF 310
Score = 135 (52.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 62/268 (23%), Positives = 105/268 (39%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAH-PSGIIAASASLDSFVRVFDVD 90
+L + S D T LW ++ Q+ V V P AS + D V +++
Sbjct: 68 ILASCSTDGTTVLWNTENGQMLAVMEQPSGSPVRVCQFSPDSTCLASGAADGTVVLWNAQ 127
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE--- 147
+ + F P G+ V G + +WD + P E
Sbjct: 128 SYKLYRCGSVKDGSLAACAFSPNGSFF-VTGSSCGDLTVWDDK-------MRCPHSEKAH 179
Query: 148 --GLKPTDKSSSKKFVLSVAWSPDGRRIA-CGSMDGTISVFDVT-------RAKFLHHLE 197
G+ D SS V R+A CG D + ++ V+ K+ L
Sbjct: 180 DLGITCCDFSSQP--VSDGEQGLQFFRLASCGQ-DCQVKIWIVSFTHILGFELKYKSTLS 236
Query: 198 GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAA 257
GH PV + +S D ++L S S D V +YD ++++ ++ H +V + +P+
Sbjct: 237 GHCAPVLACAFSH-DGQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVTTCAFAPNTLL 295
Query: 258 ITTGSSDRTVKLWDLNMRAAMQSM-TNH 284
+ TGS D+TV +W ++ Q+ T H
Sbjct: 296 LATGSMDKTVNIWQFDLETLCQARRTEH 323
>TAIR|locus:2161840 [details] [associations]
symbol:TEX1 "AT5G56130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 GO:GO:0010267
EMBL:AB011476 HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000264781
OMA:LAYACDD UniGene:At.29405 UniGene:At.29406 EMBL:AY093120
EMBL:BT000174 IPI:IPI00517881 RefSeq:NP_200424.1
ProteinModelPortal:Q9FKT5 SMR:Q9FKT5 STRING:Q9FKT5 PaxDb:Q9FKT5
PRIDE:Q9FKT5 EnsemblPlants:AT5G56130.1 GeneID:835712
KEGG:ath:AT5G56130 TAIR:At5g56130 InParanoid:Q9FKT5
PhylomeDB:Q9FKT5 ProtClustDB:CLSN2687157 ArrayExpress:Q9FKT5
Genevestigator:Q9FKT5 Uniprot:Q9FKT5
Length = 315
Score = 202 (76.2 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 67/263 (25%), Positives = 117/263 (44%)
Query: 54 RTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD----TNASIATLEASPSEVWQMQ 109
R GH V SVA + +G AS S+D R+++++ + A L+ V Q+
Sbjct: 14 REYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLC 73
Query: 110 FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169
+DPK + L G SV+LWD + + + S + +++ + PD
Sbjct: 74 WDPKHSDLVATASGDKSVRLWDARSGKCTQQVEL------------SGEN--INITYKPD 119
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS-PVDPRVLFSASDDTHVHMY 228
G +A G+ D +++ DV + K LH + ++ V + ++ P D L + V Y
Sbjct: 120 GTHVAVGNRDDELTILDVRKFKPLHRRKFNY-EVNEIAWNMPGDFFFLTTGLGTVEVLSY 178
Query: 229 DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQV 288
+ K L T ++ H + + P G GS+D V LWD++ +++ T V
Sbjct: 179 PSL-KPLDT-LTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPV 236
Query: 289 WGVSFRPLGGRVVSVSDDKSISL 311
+SF G + S S+D I +
Sbjct: 237 RTISFNYSGEYIASASEDLFIDI 259
Score = 134 (52.2 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 39/133 (29%), Positives = 69/133 (51%)
Query: 147 EGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV-----TRAKFLHHLEGHFM 201
+ L + KK V SVAW+ +G ++A GS+D T ++++ ++AK L L+GH
Sbjct: 9 KSLHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLE-LKGHTD 67
Query: 202 PVRSLVYSPVDPRVLFSASDDTHVHMYDAE-GK-SLVTAMSGHASWVLSVDASPDGAAIT 259
V L + P ++ +AS D V ++DA GK + +SG +++ PDG +
Sbjct: 68 SVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGEN---INITYKPDGTHVA 124
Query: 260 TGSSDRTVKLWDL 272
G+ D + + D+
Sbjct: 125 VGNRDDELTILDV 137
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 203 (76.5 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 62/228 (27%), Positives = 107/228 (46%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT--ATWNLIATLSIPRPEGLKPTDK 154
TL+ +W + + PKG A G A +++W +TW+ LS +G K T
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKA-IRIWSLTGSTWSTKTILS----DGHKRT-- 61
Query: 155 SSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHH--LEGHFMPVRSLVYSPVD 212
+ + WSP G+ +A S D T +++ + +F + LEGH V+S+ +S
Sbjct: 62 ------IREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR-S 114
Query: 213 PRVLFSASDDTHVHMYDAEGKS---LVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKL 269
+L + S D V +++ G ++ H V V P + + S D T+K+
Sbjct: 115 GGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEVLASASYDNTIKM 174
Query: 270 W--DL--NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ D N ++T+HT +WG+ F G R+VS SDD +I +++
Sbjct: 175 YAEDPVDNDWDCTATLTSHTSTIWGIDFDADGERLVSCSDDTTIKIWK 222
Score = 162 (62.1 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 60/230 (26%), Positives = 101/230 (43%)
Query: 52 LERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA-SIATL--EASPSEVWQM 108
LE T GH + VA HP G + AS D +R++ + + S T+ + + ++
Sbjct: 6 LEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGSTWSTKTILSDGHKRTIREI 65
Query: 109 QFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP 168
++ P G LA A A+ +W ++ ++ EG + V SV+WS
Sbjct: 66 RWSPCGQYLASASF-DATTAIWSKSSGEFECNATL---EG--------HENEVKSVSWSR 113
Query: 169 DGRRIACGSMDGTISVFDVT---RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHV 225
G +A S D ++ +++V + L H V+ +V+ P VL SAS D +
Sbjct: 114 SGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTK-EVLASASYDNTI 172
Query: 226 HMYDAEGK-----SLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
MY AE ++ H S + +D DG + + S D T+K+W
Sbjct: 173 KMY-AEDPVDNDWDCTATLTSHTSTIWGIDFDADGERLVSCSDDTTIKIW 221
Score = 144 (55.7 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 63/235 (26%), Positives = 100/235 (42%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWR---PDDMQLERTNTGHCLGVVSVAAH 69
HE V +V+W LL T S D++V +W D+ + H V V H
Sbjct: 102 HENEVKSVSW----SRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWH 157
Query: 70 PSGIIAASASLDSFVRVF---DVDTNASI-ATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
P+ + ASAS D+ ++++ VD + ATL + S +W + FD G L V+
Sbjct: 158 PTKEVLASASYDNTIKMYAEDPVDNDWDCTATLTSHTSTIWGIDFDADGERL-VSCSDDT 216
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKP---TDKSSSKKFVLSVAWSPDGRRIACGSMDGTI 182
++K+W A ++ P + + T + + V+W IA D I
Sbjct: 217 TIKIWKAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIATACGDDGI 276
Query: 183 SVFDVTR-AK-----F--LHHLEG-HFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
+F T +K F L EG H V S+ ++PV L S SDD + ++
Sbjct: 277 RIFKETSDSKPDEPTFEQLTAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIW 331
Score = 102 (41.0 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 52/234 (22%), Positives = 90/234 (38%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWR-PDDMQLERT--NTGHCLG 62
L+ H+ +W V W P + + + D+ +++W +T + GH
Sbjct: 6 LEHTLQGHKGRIWGVAWHP----KGNVFASCGEDKAIRIWSLTGSTWSTKTILSDGHKRT 61
Query: 63 VVSVAAHPSGIIAASASLDSFVRVFDVDTNA--SIATLEASPSEVWQMQFDPKGTTLAVA 120
+ + P G ASAS D+ ++ + ATLE +EV + + G LA
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 121 GGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG 180
SV +W+ A + ++ +S + V V W P +A S D
Sbjct: 122 SRDK-SVWIWEVAGDDEFECAAV----------LNSHTQDVKRVVWHPTKEVLASASYDN 170
Query: 181 TISVF--DVTRAKF--LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA 230
TI ++ D + L H + + + D L S SDDT + ++ A
Sbjct: 171 TIKMYAEDPVDNDWDCTATLTSHTSTIWGIDFD-ADGERLVSCSDDTTIKIWKA 223
Score = 49 (22.3 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 284 HTDQVWGVSFRPL-GGRVVSVSDDKSISLYE 313
H V V + P+ G+++S SDD +I +++
Sbjct: 302 HDQDVNSVQWNPVVAGQLISCSDDGTIKIWK 332
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 210 (79.0 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 75/277 (27%), Positives = 121/277 (43%)
Query: 46 RPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATL-EASPSE 104
R D++L ++ H V V G A+ + +V+ V + +A L + S +
Sbjct: 331 REIDVELHKS-LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAAN 388
Query: 105 VWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRP-EGLKPTDKSSSKKFVLS 163
+ TT + + T + + + + E L + SS ++ S
Sbjct: 389 NHRNSITENNTTTSTDNNTMTTTTTTTITTTAMTSAAELAKDVENLNTSSSPSSDLYIRS 448
Query: 164 VAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 223
V +SPDG+ +A G+ D I ++D+ K + L+GH + SL Y P + L S S D
Sbjct: 449 VCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDK-LVSGSGDR 507
Query: 224 HVHMYDAEGKSLVTAMSGHASWVLSVDASP-DGAAITTGSSDRTVKLWDLN-------MR 275
V ++D +S V +V SP DG I GS DR V++WD +
Sbjct: 508 TVRIWDLRTGQCSLTLSIEDG-VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLD 566
Query: 276 AAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+ +S T H D V+ V F G VVS S D+S+ L+
Sbjct: 567 SENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 603
Score = 205 (77.2 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 85/319 (26%), Positives = 136/319 (42%)
Query: 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDM--QLERTNTGHC----L 61
S N H S+ +T+ T + T + ++ +E NT L
Sbjct: 385 SAANNHRNSITENNTTTSTDNNTMTTTTTTTITTTAMTSAAELAKDVENLNTSSSPSSDL 444
Query: 62 GVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAG 121
+ SV P G A+ + D +R++D++ + L+ +++ + + P G L V+G
Sbjct: 445 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKL-VSG 503
Query: 122 GGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP-DGRRIACGSMDG 180
G +V++WD T TLSI +G V +VA SP DG+ IA GS+D
Sbjct: 504 SGDRTVRIWDLRTGQCSLTLSIE--DG------------VTTVAVSPGDGKYIAAGSLDR 549
Query: 181 TISVFDVTRAKFLHHLE-------GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD---A 230
+ V+D + L+ GH V S+V++ D + + S S D V +++ A
Sbjct: 550 AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNA 608
Query: 231 EGKS-LVTAMSG--------HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSM 281
KS T SG H +VLSV + + I +GS DR V WD + +
Sbjct: 609 NNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML 668
Query: 282 TNHTDQVWGVSFR---PLG 297
H + V V+ PLG
Sbjct: 669 QGHRNSVISVAVANGSPLG 687
Score = 172 (65.6 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 65/256 (25%), Positives = 110/256 (42%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
L TG+ D +++W ++ ++ GH + S+ PSG S S D VR++D+ T
Sbjct: 458 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG 517
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
TL V + P AG +V++WD+ T L+ L G
Sbjct: 518 QCSLTLSIEDG-VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESG---- 572
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLE------------GHF 200
+ K V SV ++ DG+ + GS+D ++ ++++ A + GH
Sbjct: 573 --TGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHK 630
Query: 201 MPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSV---DASPDGA- 256
V S+ + D +L S S D V +D + + + + GH + V+SV + SP G
Sbjct: 631 DFVLSVATTQNDEYIL-SGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSPLGPE 689
Query: 257 --AITTGSSDRTVKLW 270
TGS D ++W
Sbjct: 690 YNVFATGSGDCKARIW 705
Score = 157 (60.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 34/113 (30%), Positives = 65/113 (57%)
Query: 203 VRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGS 262
+RS+ +SP D + L + ++D + ++D E + +V + GH + S+D P G + +GS
Sbjct: 446 IRSVCFSP-DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS 504
Query: 263 SDRTVKLWDLNMRAAMQSMT-NHTDQVWGVSFRPLGGRVVSVSD-DKSISLYE 313
DRTV++WDL R S+T + D V V+ P G+ ++ D+++ +++
Sbjct: 505 GDRTVRIWDL--RTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWD 555
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 56/232 (24%), Positives = 108/232 (46%)
Query: 88 DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE 147
DV+ N + ++ +S + + F P G LA G +++WD ++ L +
Sbjct: 430 DVE-NLNTSSSPSSDLYIRSVCFSPDGKFLAT-GAEDRLIRIWDIENRKIVMIL-----Q 482
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLV 207
G ++ + S+ + P G ++ GS D T+ ++D+ + L V ++
Sbjct: 483 G--------HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIED-GVTTVA 533
Query: 208 YSPVDPRVLFSASDDTHVHMYDAEGKSLVTAM-------SGHASWVLSVDASPDGAAITT 260
SP D + + + S D V ++D+E LV + +GH V SV + DG ++ +
Sbjct: 534 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVS 593
Query: 261 GSSDRTVKLWDL---NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSI 309
GS DR+VKLW+L N ++ ++ + T +V + + V + +D+ I
Sbjct: 594 GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYI 645
Score = 129 (50.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 23/82 (28%), Positives = 49/82 (59%)
Query: 233 KSLVTAMSGHAS-WVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGV 291
++L T+ S + ++ SV SPDG + TG+ DR +++WD+ R + + H ++ +
Sbjct: 432 ENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSL 491
Query: 292 SFRPLGGRVVSVSDDKSISLYE 313
+ P G ++VS S D+++ +++
Sbjct: 492 DYFPSGDKLVSGSGDRTVRIWD 513
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 188 (71.2 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 42/156 (26%), Positives = 76/156 (48%)
Query: 162 LSVAWSPDGRRIACGSMDGTISVFDV-TR---AKFLHHLEGHFMPVRSLVYSPVDPRVLF 217
++ A++P G +ACG +D S++++ TR + L GH + + +D +
Sbjct: 1 MTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIV 58
Query: 218 SASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA 277
++S DT ++D E T +GH V+S+ +PD +G+ D + KLWD+
Sbjct: 59 TSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMC 118
Query: 278 MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
Q+ T H + + F P G + SDD + L++
Sbjct: 119 RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 154
Score = 171 (65.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 58/242 (23%), Positives = 106/242 (43%)
Query: 36 GSLDETVKLW----RPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
G LD ++ R ++++ R GH G +S ++S D+ ++D++T
Sbjct: 15 GGLDNICSIYNLKTREGNVRVSRELAGHT-GYLSCCRFLDDNQIVTSSGDTTCALWDIET 73
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
T +V + P T L V+G AS KLWD EG+
Sbjct: 74 GQQTTTFTGHTGDVMSLSLAPD-TRLFVSGACDASAKLWDVR-------------EGMCR 119
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFL--HHLEGHFMPVRSLVYS 209
+ + + ++ + P+G A GS D T +FD+ + L + + + S+ +S
Sbjct: 120 QTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFS 179
Query: 210 PVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKL 269
R+L + DD + +++DA ++GH + V + + DG A+ TGS D +K+
Sbjct: 180 K-SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 238
Query: 270 WD 271
W+
Sbjct: 239 WN 240
Score = 143 (55.4 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 46/150 (30%), Positives = 76/150 (50%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
D +I S D T +++D+ + GH V SL +P D R+ S + D ++
Sbjct: 53 DDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLW 111
Query: 229 DA-EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMT-NHTD 286
D EG T +GH S + ++ P+G A TGS D T +L+DL RA + MT +H +
Sbjct: 112 DVREGMCRQT-FTGHESDINAICFFPNGNAFATGSDDATCRLFDL--RADQELMTYSHDN 168
Query: 287 QVWG---VSFRPLGGRVVSVSDDKSISLYE 313
+ G VSF G +++ DD + ++++
Sbjct: 169 IICGITSVSFSKSGRLLLAGYDDFNCNVWD 198
Score = 114 (45.2 bits), Expect = 0.00025, P = 0.00025
Identities = 44/167 (26%), Positives = 70/167 (41%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
++T S D T LW + Q T TGH V+S++ P + S + D+ +++DV
Sbjct: 57 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG 116
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
T S++ + F P G A G A+ +L+D + T S
Sbjct: 117 MCRQTFTGHESDINAICFFPNGNAFAT-GSDDATCRLFDLRADQELMTYS---------H 166
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGH 199
D + SV++S GR + G D +V+D +A L GH
Sbjct: 167 DNIICG--ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGH 211
>TAIR|locus:2043333 [details] [associations]
symbol:SWA1 "AT2G47990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0006364 "rRNA processing" evidence=IEA;IMP]
[GO:0009553 "embryo sac development" evidence=IMP] [GO:0009561
"megagametogenesis" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0000741 "karyogamy" evidence=RCA]
[GO:0009560 "embryo sac egg cell differentiation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AC005309 GO:GO:0009561
EMBL:AC006072 GO:GO:0006364 HSSP:P16649 GO:GO:0080008
HOGENOM:HOG000185028 KO:K14549 OMA:QFEGHTK UniGene:At.436
UniGene:At.71162 IPI:IPI00525548 PIR:A84922 RefSeq:NP_182320.1
ProteinModelPortal:O82266 SMR:O82266 STRING:O82266 PaxDb:O82266
PRIDE:O82266 DNASU:819411 EnsemblPlants:AT2G47990.1 GeneID:819411
KEGG:ath:AT2G47990 TAIR:At2g47990 InParanoid:O82266
PhylomeDB:O82266 ProtClustDB:CLSN2683735 Genevestigator:O82266
Uniprot:O82266
Length = 530
Score = 208 (78.3 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 52/177 (29%), Positives = 86/177 (48%)
Query: 139 ATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEG 198
AT+S+ + L + + S + V SV + DG A + G + VFD+ L L
Sbjct: 74 ATVSLFSSQSLSSSRRFSFRDVVSSVCFRSDGALFAACDLSGVVQVFDIKERMALRTLRS 133
Query: 199 HFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASP-DGAA 257
H P R + Y D L S DD V +D G ++++ + GH +V D SP + +
Sbjct: 134 HSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSM 193
Query: 258 ITTGSSDRTVKLWDLNMRAAMQ-SMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ TGS D TVK+WD + + + NH V V + P GG +++ + S+ +++
Sbjct: 194 LVTGSYDHTVKVWDARVHTSNWIAEINHGLPVEDVVYLPSGG-LIATAGGNSVKVWD 249
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 54/226 (23%), Positives = 95/226 (42%)
Query: 63 VVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGG 122
V SV G + A+ L V+VFD+ ++ TL + + +++ + V+GG
Sbjct: 96 VSSVCFRSDGALFAACDLSGVVQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSGG 155
Query: 123 GSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP-DGRRIACGSMDGT 181
VK WD A +I+ D K +V SP + + GS D T
Sbjct: 156 DDGVVKYWDVAGATVIS-------------DLLGHKDYVRCGDCSPVNDSMLVTGSYDHT 202
Query: 182 ISVFD--VTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA-EGKSLVTA 238
+ V+D V + ++ + H +PV +VY P L + + V ++D G +V +
Sbjct: 203 VKVWDARVHTSNWIAEIN-HGLPVEDVVYLPSGG--LIATAGGNSVKVWDLIGGGKMVCS 259
Query: 239 MSGHASWVLSVDASPDGAA---ITTGSSDRTVKLWDLNMRAAMQSM 281
M H V S+ + +A + + + D +K++D SM
Sbjct: 260 MESHNKTVTSLRVARMESAESRLVSVALDGYMKVFDYGRAKVTYSM 305
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 203 (76.5 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 61/251 (24%), Positives = 115/251 (45%)
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
A S + +A LD R+ + T TL ++++ M + + L V+
Sbjct: 24 ACGDSTLTQITAGLDPVGRI-QMRTRR---TLRGHLAKIYAMHWGTD-SRLLVSASQDGK 78
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFD 186
+ +WD+ T N + + + +SS +V++ A++P G +ACG +D S++
Sbjct: 79 LIIWDSYTTNKVHAIPL----------RSS---WVMTCAYAPSGNFVACGGLDNICSIYS 125
Query: 187 V-TR---AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGH 242
+ TR + L GH + + +D + ++S DT ++D E +GH
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIITSSGDTTCALWDIETGQQTVGFAGH 183
Query: 243 ASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVS 302
+ V+S+ +PDG +G+ D ++KLWD+ Q+ H + V+F P G +
Sbjct: 184 SGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTT 243
Query: 303 VSDDKSISLYE 313
SDD + L++
Sbjct: 244 GSDDATCRLFD 254
Score = 167 (63.8 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 60/259 (23%), Positives = 112/259 (43%)
Query: 21 TWVPATETRPA--LLLTGSLDETVKLW----RPDDMQLERTNTGHCLGVVSVAAHPSGII 74
+WV P+ + G LD ++ R ++++ R GH G +S
Sbjct: 98 SWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHT-GYLSCCRFLDDNQ 156
Query: 75 AASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT 134
++S D+ ++D++T +V + P G T V+G AS+KLWD
Sbjct: 157 IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTF-VSGACDASIKLWDVRD 215
Query: 135 WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK--F 192
S+ R + + + +VA+ P+G GS D T +FD+ +
Sbjct: 216 -------SMCRQTFI------GHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL 262
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS 252
++ + + S+ +S R+L + DD + +++DA ++GH + V + +
Sbjct: 263 MYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVT 321
Query: 253 PDGAAITTGSSDRTVKLWD 271
DG A+ TGS D +K+W+
Sbjct: 322 DDGMAVATGSWDSFLKIWN 340
Score = 166 (63.5 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 68/283 (24%), Positives = 116/283 (40%)
Query: 34 LTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA 93
+T LD ++ M+ RT GH + ++ + SAS D + ++D T
Sbjct: 33 ITAGLDPVGRI----QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN 88
Query: 94 SIATLEASPSEVWQMQFDPKGTTLAVAG-GGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ + S V + P G +A G S+ T N+ + +P G
Sbjct: 89 KVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYL-- 146
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
S +F+ D +I S D T +++D+ + GH V SL +P D
Sbjct: 147 ---SCCRFL-------DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAP-D 195
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
R S + D + ++D GH S + +V P+G A TTGS D T +L+DL
Sbjct: 196 GRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDL 255
Query: 273 --NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ M S N + V+F G +++ DD + ++++
Sbjct: 256 RADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWD 298
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 66/309 (21%), Positives = 120/309 (38%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLG-----VVSVA 67
H ++A+ W T++R LL++ S D + +W D TN H + V++ A
Sbjct: 54 HLAKIYAMHW--GTDSR--LLVSASQDGKLIIW--DSYT---TNKVHAIPLRSSWVMTCA 104
Query: 68 AHPSGIIAASASLDSFVRVFDVDTN-ASIATLEASPSEVWQMQFDP-KGTTLAVAGGGSA 125
PSG A LD+ ++ + T ++ P + + G
Sbjct: 105 YAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT 164
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
+ LWD T T+ G D V+S++ +PDGR G+ D +I ++
Sbjct: 165 TCALWDIETGQ--QTVGFAGHSG----D-------VMSLSLAPDGRTFVSGACDASIKLW 211
Query: 186 DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD--AEGKSLVTAMSGHA 243
DV + GH + ++ + P + + SDD ++D A+ + L+ +
Sbjct: 212 DVRDSMCRQTFIGHESDINAVAFFP-NGYAFTTGSDDATCRLFDLRADQELLMYSHDNII 270
Query: 244 SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSV 303
+ SV S G + G D +WD + H ++V + G V +
Sbjct: 271 CGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 304 SDDKSISLY 312
S D + ++
Sbjct: 331 SWDSFLKIW 339
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 203 (76.5 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 61/251 (24%), Positives = 115/251 (45%)
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
A S + +A LD R+ + T TL ++++ M + + L V+
Sbjct: 24 ACGDSTLTQITAGLDPVGRI-QMRTRR---TLRGHLAKIYAMHWGTD-SRLLVSASQDGK 78
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFD 186
+ +WD+ T N + + + +SS +V++ A++P G +ACG +D S++
Sbjct: 79 LIIWDSYTTNKVHAIPL----------RSS---WVMTCAYAPSGNFVACGGLDNICSIYS 125
Query: 187 V-TR---AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGH 242
+ TR + L GH + + +D + ++S DT ++D E +GH
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIITSSGDTTCALWDIETGQQTVGFAGH 183
Query: 243 ASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVS 302
+ V+S+ +PDG +G+ D ++KLWD+ Q+ H + V+F P G +
Sbjct: 184 SGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTT 243
Query: 303 VSDDKSISLYE 313
SDD + L++
Sbjct: 244 GSDDATCRLFD 254
Score = 167 (63.8 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 60/259 (23%), Positives = 112/259 (43%)
Query: 21 TWVPATETRPA--LLLTGSLDETVKLW----RPDDMQLERTNTGHCLGVVSVAAHPSGII 74
+WV P+ + G LD ++ R ++++ R GH G +S
Sbjct: 98 SWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHT-GYLSCCRFLDDNQ 156
Query: 75 AASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT 134
++S D+ ++D++T +V + P G T V+G AS+KLWD
Sbjct: 157 IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTF-VSGACDASIKLWDVRD 215
Query: 135 WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK--F 192
S+ R + + + +VA+ P+G GS D T +FD+ +
Sbjct: 216 -------SMCRQTFI------GHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL 262
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS 252
++ + + S+ +S R+L + DD + +++DA ++GH + V + +
Sbjct: 263 MYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVT 321
Query: 253 PDGAAITTGSSDRTVKLWD 271
DG A+ TGS D +K+W+
Sbjct: 322 DDGMAVATGSWDSFLKIWN 340
Score = 166 (63.5 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 68/283 (24%), Positives = 116/283 (40%)
Query: 34 LTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA 93
+T LD ++ M+ RT GH + ++ + SAS D + ++D T
Sbjct: 33 ITAGLDPVGRI----QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN 88
Query: 94 SIATLEASPSEVWQMQFDPKGTTLAVAG-GGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ + S V + P G +A G S+ T N+ + +P G
Sbjct: 89 KVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYL-- 146
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
S +F+ D +I S D T +++D+ + GH V SL +P D
Sbjct: 147 ---SCCRFL-------DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAP-D 195
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
R S + D + ++D GH S + +V P+G A TTGS D T +L+DL
Sbjct: 196 GRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDL 255
Query: 273 --NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ M S N + V+F G +++ DD + ++++
Sbjct: 256 RADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWD 298
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 66/309 (21%), Positives = 120/309 (38%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLG-----VVSVA 67
H ++A+ W T++R LL++ S D + +W D TN H + V++ A
Sbjct: 54 HLAKIYAMHW--GTDSR--LLVSASQDGKLIIW--DSYT---TNKVHAIPLRSSWVMTCA 104
Query: 68 AHPSGIIAASASLDSFVRVFDVDTN-ASIATLEASPSEVWQMQFDP-KGTTLAVAGGGSA 125
PSG A LD+ ++ + T ++ P + + G
Sbjct: 105 YAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT 164
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
+ LWD T T+ G D V+S++ +PDGR G+ D +I ++
Sbjct: 165 TCALWDIETGQ--QTVGFAGHSG----D-------VMSLSLAPDGRTFVSGACDASIKLW 211
Query: 186 DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD--AEGKSLVTAMSGHA 243
DV + GH + ++ + P + + SDD ++D A+ + L+ +
Sbjct: 212 DVRDSMCRQTFIGHESDINAVAFFP-NGYAFTTGSDDATCRLFDLRADQELLMYSHDNII 270
Query: 244 SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSV 303
+ SV S G + G D +WD + H ++V + G V +
Sbjct: 271 CGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 304 SDDKSISLY 312
S D + ++
Sbjct: 331 SWDSFLKIW 339
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 203 (76.5 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 61/251 (24%), Positives = 115/251 (45%)
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
A S + +A LD R+ + T TL ++++ M + + L V+
Sbjct: 24 ACGDSTLTQITAGLDPVGRI-QMRTRR---TLRGHLAKIYAMHWGTD-SRLLVSASQDGK 78
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFD 186
+ +WD+ T N + + + +SS +V++ A++P G +ACG +D S++
Sbjct: 79 LIIWDSYTTNKVHAIPL----------RSS---WVMTCAYAPSGNFVACGGLDNICSIYS 125
Query: 187 V-TR---AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGH 242
+ TR + L GH + + +D + ++S DT ++D E +GH
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIITSSGDTTCALWDIETGQQTVGFAGH 183
Query: 243 ASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVS 302
+ V+S+ +PDG +G+ D ++KLWD+ Q+ H + V+F P G +
Sbjct: 184 SGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTT 243
Query: 303 VSDDKSISLYE 313
SDD + L++
Sbjct: 244 GSDDATCRLFD 254
Score = 167 (63.8 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 60/259 (23%), Positives = 112/259 (43%)
Query: 21 TWVPATETRPA--LLLTGSLDETVKLW----RPDDMQLERTNTGHCLGVVSVAAHPSGII 74
+WV P+ + G LD ++ R ++++ R GH G +S
Sbjct: 98 SWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHT-GYLSCCRFLDDNQ 156
Query: 75 AASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT 134
++S D+ ++D++T +V + P G T V+G AS+KLWD
Sbjct: 157 IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTF-VSGACDASIKLWDVRD 215
Query: 135 WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK--F 192
S+ R + + + +VA+ P+G GS D T +FD+ +
Sbjct: 216 -------SMCRQTFI------GHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL 262
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS 252
++ + + S+ +S R+L + DD + +++DA ++GH + V + +
Sbjct: 263 MYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVT 321
Query: 253 PDGAAITTGSSDRTVKLWD 271
DG A+ TGS D +K+W+
Sbjct: 322 DDGMAVATGSWDSFLKIWN 340
Score = 166 (63.5 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 68/283 (24%), Positives = 116/283 (40%)
Query: 34 LTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA 93
+T LD ++ M+ RT GH + ++ + SAS D + ++D T
Sbjct: 33 ITAGLDPVGRI----QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN 88
Query: 94 SIATLEASPSEVWQMQFDPKGTTLAVAG-GGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ + S V + P G +A G S+ T N+ + +P G
Sbjct: 89 KVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYL-- 146
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
S +F+ D +I S D T +++D+ + GH V SL +P D
Sbjct: 147 ---SCCRFL-------DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAP-D 195
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
R S + D + ++D GH S + +V P+G A TTGS D T +L+DL
Sbjct: 196 GRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDL 255
Query: 273 --NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ M S N + V+F G +++ DD + ++++
Sbjct: 256 RADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWD 298
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 66/309 (21%), Positives = 120/309 (38%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLG-----VVSVA 67
H ++A+ W T++R LL++ S D + +W D TN H + V++ A
Sbjct: 54 HLAKIYAMHW--GTDSR--LLVSASQDGKLIIW--DSYT---TNKVHAIPLRSSWVMTCA 104
Query: 68 AHPSGIIAASASLDSFVRVFDVDTN-ASIATLEASPSEVWQMQFDP-KGTTLAVAGGGSA 125
PSG A LD+ ++ + T ++ P + + G
Sbjct: 105 YAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT 164
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
+ LWD T T+ G D V+S++ +PDGR G+ D +I ++
Sbjct: 165 TCALWDIETGQ--QTVGFAGHSG----D-------VMSLSLAPDGRTFVSGACDASIKLW 211
Query: 186 DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD--AEGKSLVTAMSGHA 243
DV + GH + ++ + P + + SDD ++D A+ + L+ +
Sbjct: 212 DVRDSMCRQTFIGHESDINAVAFFP-NGYAFTTGSDDATCRLFDLRADQELLMYSHDNII 270
Query: 244 SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSV 303
+ SV S G + G D +WD + H ++V + G V +
Sbjct: 271 CGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 304 SDDKSISLY 312
S D + ++
Sbjct: 331 SWDSFLKIW 339
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 203 (76.5 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 61/251 (24%), Positives = 115/251 (45%)
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
A S + +A LD R+ + T TL ++++ M + + L V+
Sbjct: 24 ACGDSTLTQITAGLDPVGRI-QMRTRR---TLRGHLAKIYAMHWGTD-SRLLVSASQDGK 78
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFD 186
+ +WD+ T N + + + +SS +V++ A++P G +ACG +D S++
Sbjct: 79 LIIWDSYTTNKVHAIPL----------RSS---WVMTCAYAPSGNFVACGGLDNICSIYS 125
Query: 187 V-TR---AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGH 242
+ TR + L GH + + +D + ++S DT ++D E +GH
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIITSSGDTTCALWDIETGQQTVGFAGH 183
Query: 243 ASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVS 302
+ V+S+ +PDG +G+ D ++KLWD+ Q+ H + V+F P G +
Sbjct: 184 SGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTT 243
Query: 303 VSDDKSISLYE 313
SDD + L++
Sbjct: 244 GSDDATCRLFD 254
Score = 167 (63.8 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 60/259 (23%), Positives = 112/259 (43%)
Query: 21 TWVPATETRPA--LLLTGSLDETVKLW----RPDDMQLERTNTGHCLGVVSVAAHPSGII 74
+WV P+ + G LD ++ R ++++ R GH G +S
Sbjct: 98 SWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHT-GYLSCCRFLDDNQ 156
Query: 75 AASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT 134
++S D+ ++D++T +V + P G T V+G AS+KLWD
Sbjct: 157 IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTF-VSGACDASIKLWDVRD 215
Query: 135 WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK--F 192
S+ R + + + +VA+ P+G GS D T +FD+ +
Sbjct: 216 -------SMCRQTFI------GHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL 262
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS 252
++ + + S+ +S R+L + DD + +++DA ++GH + V + +
Sbjct: 263 MYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVT 321
Query: 253 PDGAAITTGSSDRTVKLWD 271
DG A+ TGS D +K+W+
Sbjct: 322 DDGMAVATGSWDSFLKIWN 340
Score = 166 (63.5 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 68/283 (24%), Positives = 116/283 (40%)
Query: 34 LTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA 93
+T LD ++ M+ RT GH + ++ + SAS D + ++D T
Sbjct: 33 ITAGLDPVGRI----QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN 88
Query: 94 SIATLEASPSEVWQMQFDPKGTTLAVAG-GGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ + S V + P G +A G S+ T N+ + +P G
Sbjct: 89 KVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYL-- 146
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
S +F+ D +I S D T +++D+ + GH V SL +P D
Sbjct: 147 ---SCCRFL-------DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAP-D 195
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
R S + D + ++D GH S + +V P+G A TTGS D T +L+DL
Sbjct: 196 GRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDL 255
Query: 273 --NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ M S N + V+F G +++ DD + ++++
Sbjct: 256 RADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWD 298
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 66/309 (21%), Positives = 120/309 (38%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLG-----VVSVA 67
H ++A+ W T++R LL++ S D + +W D TN H + V++ A
Sbjct: 54 HLAKIYAMHW--GTDSR--LLVSASQDGKLIIW--DSYT---TNKVHAIPLRSSWVMTCA 104
Query: 68 AHPSGIIAASASLDSFVRVFDVDTN-ASIATLEASPSEVWQMQFDP-KGTTLAVAGGGSA 125
PSG A LD+ ++ + T ++ P + + G
Sbjct: 105 YAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT 164
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
+ LWD T T+ G D V+S++ +PDGR G+ D +I ++
Sbjct: 165 TCALWDIETGQ--QTVGFAGHSG----D-------VMSLSLAPDGRTFVSGACDASIKLW 211
Query: 186 DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD--AEGKSLVTAMSGHA 243
DV + GH + ++ + P + + SDD ++D A+ + L+ +
Sbjct: 212 DVRDSMCRQTFIGHESDINAVAFFP-NGYAFTTGSDDATCRLFDLRADQELLMYSHDNII 270
Query: 244 SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSV 303
+ SV S G + G D +WD + H ++V + G V +
Sbjct: 271 CGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 304 SDDKSISLY 312
S D + ++
Sbjct: 331 SWDSFLKIW 339
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 203 (76.5 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 61/251 (24%), Positives = 115/251 (45%)
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
A S + +A LD R+ + T TL ++++ M + + L V+
Sbjct: 24 ACGDSTLTQITAGLDPVGRI-QMRTRR---TLRGHLAKIYAMHWGTD-SRLLVSASQDGK 78
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFD 186
+ +WD+ T N + + + +SS +V++ A++P G +ACG +D S++
Sbjct: 79 LIIWDSYTTNKVHAIPL----------RSS---WVMTCAYAPSGNFVACGGLDNICSIYS 125
Query: 187 V-TR---AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGH 242
+ TR + L GH + + +D + ++S DT ++D E +GH
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIITSSGDTTCALWDIETGQQTVGFAGH 183
Query: 243 ASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVS 302
+ V+S+ +PDG +G+ D ++KLWD+ Q+ H + V+F P G +
Sbjct: 184 SGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTT 243
Query: 303 VSDDKSISLYE 313
SDD + L++
Sbjct: 244 GSDDATCRLFD 254
Score = 167 (63.8 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 60/259 (23%), Positives = 112/259 (43%)
Query: 21 TWVPATETRPA--LLLTGSLDETVKLW----RPDDMQLERTNTGHCLGVVSVAAHPSGII 74
+WV P+ + G LD ++ R ++++ R GH G +S
Sbjct: 98 SWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHT-GYLSCCRFLDDNQ 156
Query: 75 AASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT 134
++S D+ ++D++T +V + P G T V+G AS+KLWD
Sbjct: 157 IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTF-VSGACDASIKLWDVRD 215
Query: 135 WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK--F 192
S+ R + + + +VA+ P+G GS D T +FD+ +
Sbjct: 216 -------SMCRQTFI------GHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL 262
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS 252
++ + + S+ +S R+L + DD + +++DA ++GH + V + +
Sbjct: 263 MYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVT 321
Query: 253 PDGAAITTGSSDRTVKLWD 271
DG A+ TGS D +K+W+
Sbjct: 322 DDGMAVATGSWDSFLKIWN 340
Score = 166 (63.5 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 68/283 (24%), Positives = 116/283 (40%)
Query: 34 LTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA 93
+T LD ++ M+ RT GH + ++ + SAS D + ++D T
Sbjct: 33 ITAGLDPVGRI----QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN 88
Query: 94 SIATLEASPSEVWQMQFDPKGTTLAVAG-GGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ + S V + P G +A G S+ T N+ + +P G
Sbjct: 89 KVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYL-- 146
Query: 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212
S +F+ D +I S D T +++D+ + GH V SL +P D
Sbjct: 147 ---SCCRFL-------DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAP-D 195
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
R S + D + ++D GH S + +V P+G A TTGS D T +L+DL
Sbjct: 196 GRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDL 255
Query: 273 --NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ M S N + V+F G +++ DD + ++++
Sbjct: 256 RADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWD 298
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 66/309 (21%), Positives = 120/309 (38%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLG-----VVSVA 67
H ++A+ W T++R LL++ S D + +W D TN H + V++ A
Sbjct: 54 HLAKIYAMHW--GTDSR--LLVSASQDGKLIIW--DSYT---TNKVHAIPLRSSWVMTCA 104
Query: 68 AHPSGIIAASASLDSFVRVFDVDTN-ASIATLEASPSEVWQMQFDP-KGTTLAVAGGGSA 125
PSG A LD+ ++ + T ++ P + + G
Sbjct: 105 YAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT 164
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
+ LWD T T+ G D V+S++ +PDGR G+ D +I ++
Sbjct: 165 TCALWDIETGQ--QTVGFAGHSG----D-------VMSLSLAPDGRTFVSGACDASIKLW 211
Query: 186 DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD--AEGKSLVTAMSGHA 243
DV + GH + ++ + P + + SDD ++D A+ + L+ +
Sbjct: 212 DVRDSMCRQTFIGHESDINAVAFFP-NGYAFTTGSDDATCRLFDLRADQELLMYSHDNII 270
Query: 244 SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSV 303
+ SV S G + G D +WD + H ++V + G V +
Sbjct: 271 CGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 304 SDDKSISLY 312
S D + ++
Sbjct: 331 SWDSFLKIW 339
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 207 (77.9 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 84/304 (27%), Positives = 139/304 (45%)
Query: 31 ALLLTGSLDETVKLWRPDDM-QLERTNTG-HCLGVVSVAAHPSGIIAASASLDSFVRVFD 88
+LL T SLD+T++L+ D +L + H V PSG I AS S D +++
Sbjct: 23 SLLATCSLDKTIRLYSLRDFTELPHSPLKFHTYAVHCCCFSPSGHILASCSTDGTTVLWN 82
Query: 89 VDTNASIATLEA-SPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE 147
+ +A +E S S V QF P T LA +G +V LW+ ++ L S+
Sbjct: 83 TENGQMLAVMEQPSGSPVRVCQFSPDSTCLA-SGAADGTVVLWNAQSYKLYRCGSV---- 137
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLV 207
K S + + A+SP+G GS G ++V+D + + H + H + +
Sbjct: 138 ------KDGS---LAACAFSPNGSFFVTGSSCGDLTVWD-DKMRCPHSEKAHDLGITCCD 187
Query: 208 YS--PVDPRV-------LFSASDDTHV--------HMYDAEGKSLVTAMSGHASWVLSVD 250
+S PV L S D V H+ E K T +SGH + VL+
Sbjct: 188 FSSQPVSDGEQGLQFFRLASCGQDCQVKIWIVSFTHILGFELKYKST-LSGHCAPVLACA 246
Query: 251 ASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSIS 310
S DG + +GS D++V ++D N + ++T HT V +F P + + S DK+++
Sbjct: 247 FSHDGQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVTTCAFAPNTLLLATGSMDKTVN 306
Query: 311 LYEY 314
++++
Sbjct: 307 IWQF 310
Score = 135 (52.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 62/268 (23%), Positives = 105/268 (39%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAH-PSGIIAASASLDSFVRVFDVD 90
+L + S D T LW ++ Q+ V V P AS + D V +++
Sbjct: 68 ILASCSTDGTTVLWNTENGQMLAVMEQPSGSPVRVCQFSPDSTCLASGAADGTVVLWNAQ 127
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE--- 147
+ + F P G+ V G + +WD + P E
Sbjct: 128 SYKLYRCGSVKDGSLAACAFSPNGSFF-VTGSSCGDLTVWDDK-------MRCPHSEKAH 179
Query: 148 --GLKPTDKSSSKKFVLSVAWSPDGRRIA-CGSMDGTISVFDVT-------RAKFLHHLE 197
G+ D SS V R+A CG D + ++ V+ K+ L
Sbjct: 180 DLGITCCDFSSQP--VSDGEQGLQFFRLASCGQ-DCQVKIWIVSFTHILGFELKYKSTLS 236
Query: 198 GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAA 257
GH PV + +S D ++L S S D V +YD ++++ ++ H +V + +P+
Sbjct: 237 GHCAPVLACAFSH-DGQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVTTCAFAPNTLL 295
Query: 258 ITTGSSDRTVKLWDLNMRAAMQSM-TNH 284
+ TGS D+TV +W ++ Q+ T H
Sbjct: 296 LATGSMDKTVNIWQFDLETLCQARRTEH 323
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 207 (77.9 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 74/264 (28%), Positives = 123/264 (46%)
Query: 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
GH V+SVA P+G AS S D+ VR +D+ T T + V + + P G L
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKL 171
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW-----SPDGRR 172
A +G + + LWD +T + L + K++ +++W +P+ R
Sbjct: 172 A-SGCKNGQILLWDPSTGKQVG-------RAL-----AGHSKWITALSWEPLHANPECRY 218
Query: 173 IACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG 232
+A S DG++ V+D T + L GH V L + +L+SAS D + ++ A
Sbjct: 219 VASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG--GDGLLYSASQDRTIKVWRAHD 276
Query: 233 KSLVTAMSGHASWVLSVDASPDGAAITTGS---SDRTVKLWDLNMRAAMQSMTNHTDQVW 289
L + GH WV ++ S D A+ TG+ ++ +V DL R ++Q + +
Sbjct: 277 GVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEASVNAQDL--RGSLQELKERALSRY 333
Query: 290 GVSFRPLG-GRVVSVSDDKSISLY 312
+ R G R+VS SDD ++ L+
Sbjct: 334 NL-VRGRGLERLVSGSDDFTLFLW 356
Score = 194 (73.4 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 42/142 (29%), Positives = 74/142 (52%)
Query: 172 RIACGSMDGTISVFDVTRAKF-LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA 230
R+ GS D T+ ++ K L + GH + +++SP D R++ SAS D + ++D
Sbjct: 343 RLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSP-DSRIIASASFDKSIKLWDG 401
Query: 231 EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWG 290
+ ++ GH + V + S D + +GSSD T+K+WD+ + + H D+V+
Sbjct: 402 RTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYA 461
Query: 291 VSFRPLGGRVVSVSDDKSISLY 312
V + P G RV S DK + ++
Sbjct: 462 VDWSPDGQRVASGGKDKCLRIW 483
Score = 180 (68.4 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 54/194 (27%), Positives = 94/194 (48%)
Query: 96 ATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKS 155
++LE V + F P G LA +G G +V+ WD +T T +G
Sbjct: 108 SSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDLSTETPHFTC-----QG------- 154
Query: 156 SSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHH-LEGHFMPVRSLVYSPV--D 212
+ +VLS++WSPDG+++A G +G I ++D + K + L GH + +L + P+ +
Sbjct: 155 -HRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHAN 213
Query: 213 P--RVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
P R + S+S D V ++D ++GH V + DG + + S DRT+K+W
Sbjct: 214 PECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 272
Query: 271 DLNMRAAMQSMTNH 284
+ +++ H
Sbjct: 273 RAHDGVLCRTLQGH 286
Score = 162 (62.1 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 51/155 (32%), Positives = 78/155 (50%)
Query: 33 LLTGSLDETVKLWRP--DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90
L++GS D T+ LW P D L R TGH + V P I ASAS D ++++D
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARM-TGHQALINQVLFSPDSRIIASASFDKSIKLWDGR 402
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
T +A+L + V+Q+ + + L V+G +++K+WD L A L P G
Sbjct: 403 TGKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWDVKAQKLAADL--P---G-- 454
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
D+ V +V WSPDG+R+A G D + ++
Sbjct: 455 HADE------VYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 159 (61.0 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 72/309 (23%), Positives = 130/309 (42%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD-MQLERTNTGHCLGVVSVA---- 67
H V +++W P + L +G + + LW P Q+ R GH + +++
Sbjct: 155 HRHWVLSISWSPDGKK----LASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPL 210
Query: 68 -AHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
A+P AS+S D VRV+D L V +++ G L + +
Sbjct: 211 HANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQDRT 268
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSV-AWSPDGRRIACGSMDGTISVF 185
+K+W L TL + G + S + L A+ P + +++
Sbjct: 269 IKVWRAHDGVLCRTL---QGHGHWVNTMALSTDYALRTGAFEP---------AEASVNAQ 316
Query: 186 DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD-AEGKSLVTAMSGHAS 244
D+ + L L+ + +LV R L S SDD + ++ AE K + M+GH +
Sbjct: 317 DLRGS--LQELKERALSRYNLVRGRGLER-LVSGSDDFTLFLWSPAEDKKPLARMTGHQA 373
Query: 245 WVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVS 304
+ V SPD I + S D+++KLWD + S+ H V+ +++ +VS S
Sbjct: 374 LINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGS 433
Query: 305 DDKSISLYE 313
D ++ +++
Sbjct: 434 SDSTLKVWD 442
Score = 152 (58.6 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 38/124 (30%), Positives = 62/124 (50%)
Query: 196 LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDG 255
LEGH V S+ +SP + L S S DT V +D ++ GH WVLS+ SPDG
Sbjct: 110 LEGHSEAVISVAFSPTG-KYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 168
Query: 256 AAITTGSSDRTVKLWDLNM-RAAMQSMTNHTDQVWGVSFRPLGGR-----VVSVSDDKSI 309
+ +G + + LWD + + +++ H+ + +S+ PL V S S D S+
Sbjct: 169 KKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSV 228
Query: 310 SLYE 313
+++
Sbjct: 229 RVWD 232
Score = 114 (45.2 bits), Expect = 0.00097, P = 0.00097
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 237 TAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPL 296
+++ GH+ V+SV SP G + +GS D TV+ WDL+ + H V +S+ P
Sbjct: 108 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPD 167
Query: 297 GGRVVSVSDDKSISLYEYS 315
G ++ S + I L++ S
Sbjct: 168 GKKLASGCKNGQILLWDPS 186
Score = 114 (45.2 bits), Expect = 0.00097, P = 0.00097
Identities = 37/127 (29%), Positives = 53/127 (41%)
Query: 95 IATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDK 154
+A + + + Q+ F P +A A S+KLWD T +A+L
Sbjct: 365 LARMTGHQALINQVLFSPDSRIIASASFDK-SIKLWDGRTGKYLASLR------------ 411
Query: 155 SSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPR 214
V +AWS D R + GS D T+ V+DV K L GH V ++ +SP R
Sbjct: 412 -GHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQR 470
Query: 215 VLFSASD 221
V D
Sbjct: 471 VASGGKD 477
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 210 (79.0 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 64/244 (26%), Positives = 109/244 (44%)
Query: 71 SGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLW 130
S + + D V ++ + +I +L S + + FD L AG S ++KLW
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDAS-EGLVAAGAASGTIKLW 86
Query: 131 DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRA 190
D ++ TL T S+ +SV + P G A GS+D + ++D+ +
Sbjct: 87 DLEEAKVVRTL----------TGHRSN---CVSVNFHPFGEFFASGSLDTNLKIWDIRKK 133
Query: 191 KFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVD 250
+H +GH V L ++P D R + S +D V ++D L+ H + S+D
Sbjct: 134 GCIHTYKGHTRGVNVLRFTP-DGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLD 192
Query: 251 ASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSIS 310
P + TGS+D+TVK WDL + S T V ++F P G+ V +S+
Sbjct: 193 FHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNP-DGKSVLCGLQESLK 251
Query: 311 LYEY 314
++ +
Sbjct: 252 IFSW 255
Score = 199 (75.1 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 65/243 (26%), Positives = 114/243 (46%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPS-GIIAASASLDSFVRVFDVD 90
+L+TG D V LW + GH G+ SV S G++AA A+ + ++++D++
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGT-IKLWDLE 89
Query: 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
+ TL S + F P G A +G ++K+WD R +G
Sbjct: 90 EAKVVRTLTGHRSNCVSVNFHPFGEFFA-SGSLDTNLKIWDI------------RKKGCI 136
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
T K ++ V + ++PDGR I G D + V+D+T K LH + H ++SL + P
Sbjct: 137 HTYKGHTRG-VNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHP 195
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKL- 269
+ +L + S D V +D E L+ + + V + +PDG ++ G + ++K+
Sbjct: 196 HE-FLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQE-SLKIF 253
Query: 270 -WD 271
W+
Sbjct: 254 SWE 256
Score = 180 (68.4 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 52/201 (25%), Positives = 87/201 (43%)
Query: 113 KGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRR 172
K + + V GG V LW +I +P + SS + SV +
Sbjct: 27 KSSRVLVTGGEDHKVNLW-----------AIGKPNAILSLYGHSSG--IDSVTFDASEGL 73
Query: 173 IACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG 232
+A G+ GTI ++D+ AK + L GH S+ + P S S DT++ ++D
Sbjct: 74 VAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFG-EFFASGSLDTNLKIWDIRK 132
Query: 233 KSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVS 292
K + GH V + +PDG I +G D VK+WDL + +H ++ +
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLD 192
Query: 293 FRPLGGRVVSVSDDKSISLYE 313
F P + + S DK++ ++
Sbjct: 193 FHPHEFLLATGSADKTVKFWD 213
Score = 178 (67.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 59/217 (27%), Positives = 98/217 (45%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H + +VT+ A+E L+ G+ T+KLW ++ ++ RT TGH VSV HP G
Sbjct: 58 HSSGIDSVTF-DASE---GLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFG 113
Query: 73 IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
AS SLD+ ++++D+ I T + V ++F P G + V+GG VK+WD
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWI-VSGGEDNVVKVWDL 172
Query: 133 ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF 192
L+ KS K + S+ + P +A GS D T+ +D+ +
Sbjct: 173 TAGKLLHEF------------KSHEGK-IQSLDFHPHEFLLATGSADKTVKFWDLETFEL 219
Query: 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
+ VR L ++P VL + + ++
Sbjct: 220 IGSGGTETTGVRCLTFNPDGKSVLCGLQESLKIFSWE 256
Score = 139 (54.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 35/126 (27%), Positives = 60/126 (47%)
Query: 189 RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGK-SLVTAMSGHASWVL 247
RA L H V L RVL + +D V+++ A GK + + ++ GH+S +
Sbjct: 5 RAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLW-AIGKPNAILSLYGHSSGID 63
Query: 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDK 307
SV + G++ T+KLWDL ++++T H V+F P G S S D
Sbjct: 64 SVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDT 123
Query: 308 SISLYE 313
++ +++
Sbjct: 124 NLKIWD 129
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 212 (79.7 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 53/160 (33%), Positives = 87/160 (54%)
Query: 154 KSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDP 213
K+ + F SVA+SPD R+IA G DG I ++D LE H + S+ +SP D
Sbjct: 851 KTLASGFAGSVAFSPDSRQIAAGFKDGKIFIWDAA-GTLQKTLERHPGAIMSIAFSP-DV 908
Query: 214 RVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLN 273
+ L + S D+ + +D + A+ GH+ V ++ SPDG I +GS+D+T+KLWD
Sbjct: 909 KQLVTCSTDSTIKRWDITIGGVQEAV-GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAA 967
Query: 274 MRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+++T H D V V F ++VS S + ++ +++
Sbjct: 968 TGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSE-AVKIWD 1006
Score = 192 (72.6 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 83/286 (29%), Positives = 128/286 (44%)
Query: 45 WRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAS-PS 103
W P + +T TGH V VA P G AS S ++++D T + TL S P
Sbjct: 609 WTP----MIQTLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPK 664
Query: 104 EVWQMQ--------FDPKGTTLAVAGGGSASVKLWDTATWNL--IAT---LSIPRPEGLK 150
+Q+Q F P + L ++G SV LWDT T + IA +S L+
Sbjct: 665 RRYQIQQEQVKAMAFLPD-SKLIISGYYDGSVMLWDTTTGDRQEIADHFGISKVNYTYLQ 723
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIAC-G-SMDGT-ISVFDVTRAKFLHHLEGHFMPVRSLV 207
P ++ + + A+S D ++IA G S D T I +FD L+GH ++
Sbjct: 724 PPEQGGYG--LHAGAFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILKGHSHECSTMA 781
Query: 208 YSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTV 267
+S D R L + S D V +++ L GH VLSV S DG I +GS + V
Sbjct: 782 FSS-DSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIE-AV 839
Query: 268 KLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
KLWD ++++ + V+F P ++ + D I +++
Sbjct: 840 KLWDAATGDLLKTLASGF--AGSVAFSPDSRQIAAGFKDGKIFIWD 883
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 83/317 (26%), Positives = 133/317 (41%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTG-HCLG--------V 63
H E+VW V + P + + +GS +KLW L++T +G H V
Sbjct: 619 HSEAVWRVAFSPDGKQ----IASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQV 674
Query: 64 VSVAAHPSGIIAASASLDSFVRVFDVDTN--ASIAT-LEASPSEVWQMQFDPKGTTLAVA 120
++A P + S D V ++D T IA S +Q +G A
Sbjct: 675 KAMAFLPDSKLIISGYYDGSVMLWDTTTGDRQEIADHFGISKVNYTYLQPPEQGGYGLHA 734
Query: 121 GGGSASVKLWDTATWNLIAT--LSIPRPEG-LKPTDKSSSKKFVLSVAWSPDGRRIACGS 177
G SA K W+ +T + G L+ K S + ++A+S D R++ GS
Sbjct: 735 GAFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILKGHSHE-CSTMAFSSDSRQLVTGS 793
Query: 178 MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAE-GKSLV 236
+D T+ +++ T GH V S+ S D R + S S + V ++DA G L
Sbjct: 794 VDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISS-DGRQIVSGSIEA-VKLWDAATGDLLK 851
Query: 237 TAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPL 296
T SG A SV SPD I G D + +WD +++ H + ++F P
Sbjct: 852 TLASGFAG---SVAFSPDSRQIAAGFKDGKIFIWDA-AGTLQKTLERHPGAIMSIAFSPD 907
Query: 297 GGRVVSVSDDKSISLYE 313
++V+ S D +I ++
Sbjct: 908 VKQLVTCSTDSTIKRWD 924
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 61/258 (23%), Positives = 107/258 (41%)
Query: 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
GH V ++ P G + AS S D ++++D T TL V ++ F +
Sbjct: 935 GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQI 994
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS 177
S +VK+WD AT G S F + VA SPDG+ IA G
Sbjct: 995 VSCS--SEAVKIWDAAT-------------GKVQNSFESDDVFTI-VAVSPDGKHIASGH 1038
Query: 178 MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVH--MYDAEGKSL 235
+G I ++D+ L + G+ SLV + V L A +T + ++ + K +
Sbjct: 1039 CNGRIKLWDMATGSLLKTMAGYRSKFDSLVTTEVFDIQLQEAIFNTQITGLVFSPDAKLI 1098
Query: 236 VTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW-DLNMRAAMQSMTNHTDQVWGVSFR 294
++ + A + DA+ TG + + D + A + + + ++ V+F
Sbjct: 1099 LSTSTDRA--IKLWDAA-------TGDLQKRLPCHSDSIITDAFSRSSGYPNWIFSVAFS 1149
Query: 295 PLGGRVVSVSDDKSISLY 312
G + + S DK+I ++
Sbjct: 1150 SDGQHIAAASADKTIRVW 1167
Score = 133 (51.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 60/238 (25%), Positives = 105/238 (44%)
Query: 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAA 68
V+ A S T V + + + ++ +GS D+T+KLW L++T TGH V V
Sbjct: 930 VQEAVGHSKHVTTMVLSPDGK--VIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVF 987
Query: 69 HPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQM-QFDPKGTTLAVAGGGSASV 127
S S ++ V+++D T + E+ +V+ + P G +A +G + +
Sbjct: 988 SLDNRQIVSCSSEA-VKIWDAATGKVQNSFESD--DVFTIVAVSPDGKHIA-SGHCNGRI 1043
Query: 128 KLWDTATWNLIATLSIPRP--EGLKPTD----KSSSKKF---VLSVAWSPDGRRIACGSM 178
KLWD AT +L+ T++ R + L T+ + F + + +SPD + I S
Sbjct: 1044 KLWDMATGSLLKTMAGYRSKFDSLVTTEVFDIQLQEAIFNTQITGLVFSPDAKLILSTST 1103
Query: 179 DGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD--PRVLFS---ASDDTHVHMYDAE 231
D I ++D L H + + +S P +FS +SD H+ A+
Sbjct: 1104 DRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSSGYPNWIFSVAFSSDGQHIAAASAD 1161
Score = 105 (42.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 29/107 (27%), Positives = 53/107 (49%)
Query: 181 TISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA---------- 230
T VFD+ + + + + + LV+SP D +++ S S D + ++DA
Sbjct: 1069 TTEVFDIQLQEAIFNTQ-----ITGLVFSP-DAKLILSTSTDRAIKLWDAATGDLQKRLP 1122
Query: 231 -EGKSLVT----AMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
S++T SG+ +W+ SV S DG I S+D+T+++W +
Sbjct: 1123 CHSDSIITDAFSRSSGYPNWIFSVAFSSDGQHIAAASADKTIRVWSI 1169
Score = 99 (39.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 29/110 (26%), Positives = 49/110 (44%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+ G D + +W L++T H ++S+A P + S DS ++ +D+ T
Sbjct: 870 IAAGFKDGKIFIWDAAGT-LQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDI-TI 927
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS 142
+ V M P G +A +G ++KLWD AT +L TL+
Sbjct: 928 GGVQEAVGHSKHVTTMVLSPDGKVIA-SGSADKTIKLWDAATGDLQKTLT 976
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 202 (76.2 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 67/237 (28%), Positives = 111/237 (46%)
Query: 90 DTNASIATLEASP-SEVWQMQFDPKGTTLAVAGGGSASVKLW--DTATWNLIATLSIPRP 146
DT A + A P S W + ++PKGT LA GG ++++W + +W L
Sbjct: 3 DTLALLQKFNAHPDSRCWYVAWNPKGTLLASCGG-DRTIRIWGREGDSWECKTVLQ---- 57
Query: 147 EGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF--LHHLEGHFMPVR 204
+G + T V VAWSP G +A S D T ++ F L LEGH V+
Sbjct: 58 DGHQRT--------VRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVK 109
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKS---LVTAMSGHASWVLSVDASPDGAAITTG 261
+ ++P +L + S D V +++ + ++ V+ ++ H V V P + +
Sbjct: 110 CVAWAP-SGNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQELLASC 168
Query: 262 SSDRTVKLW-----DLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
S D V ++ D RA ++ HT VWG++F P G R+ S SDD ++ +++
Sbjct: 169 SYDNNVCVYKEEDDDWECRATLEG---HTSTVWGLTFDPSGQRLASCSDDCTVKIWK 222
Score = 158 (60.7 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 72/249 (28%), Positives = 104/249 (41%)
Query: 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDM-QLERTNT--GHCLGVV 64
+V HE V V W P+ LL T S D++V +W D+ + E + H V
Sbjct: 99 TVLEGHENEVKCVAWAPSGN----LLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVK 154
Query: 65 SVAAHPSGIIAASASLDSFVRVF-DVDTNASI-ATLEASPSEVWQMQFDPKGTTLAVAGG 122
V HP+ + AS S D+ V V+ + D + ATLE S VW + FDP G LA
Sbjct: 155 HVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPSGQRLASCSD 214
Query: 123 GSASVKLWDT-----------ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP-DG 170
+VK+W A W + TLS G + V +AW P G
Sbjct: 215 -DCTVKIWKECQPEGGQEGTDAAWKCVCTLS-----GFHG-------RTVYDIAWCPLTG 261
Query: 171 R-RIACGSMDGTISVF------DVTRAKF---LHHLEGHFMPVRSLVYSPVDPRVLFSAS 220
ACG DG + VF D + F H + H V + + P + +L S S
Sbjct: 262 ALATACGD-DG-VRVFKEDETADPDQPAFSLSAHVPKAHTQDVNCIAWHPKEAGLLVSCS 319
Query: 221 DDTHVHMYD 229
D+ + +++
Sbjct: 320 DNGEIAVWN 328
Score = 151 (58.2 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 76/280 (27%), Positives = 109/280 (38%)
Query: 11 NAHEES-VWAVTWVPATETRPALLLTGSLDETVKLW-RPDDMQLERT--NTGHCLGVVSV 66
NAH +S W V W P + LL + D T+++W R D +T GH V V
Sbjct: 12 NAHPDSRCWYVAWNP----KGTLLASCGGDRTIRIWGREGDSWECKTVLQDGHQRTVRKV 67
Query: 67 AAHPSGIIAASASLDSFVRVFDV--DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGS 124
A P G ASAS D+ ++ D + LE +EV + + P G LA
Sbjct: 68 AWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNLLATCSRDK 127
Query: 125 ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISV 184
SV +W+ N +S+ +S + V V W P +A S D + V
Sbjct: 128 -SVWIWEVDEENEYECVSVV----------NSHTQDVKHVVWHPTQELLASCSYDNNVCV 176
Query: 185 FDVTRAKFLHH--LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY------------DA 230
+ + LEGH V L + P R L S SDD V ++ DA
Sbjct: 177 YKEEDDDWECRATLEGHTSTVWGLTFDPSGQR-LASCSDDCTVKIWKECQPEGGQEGTDA 235
Query: 231 EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
K + T H V + P A+ T D V+++
Sbjct: 236 AWKCVCTLSGFHGRTVYDIAWCPLTGALATACGDDGVRVF 275
Score = 107 (42.7 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 46/183 (25%), Positives = 76/183 (41%)
Query: 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRP--DDMQLERTNTGHCLGVVSV 66
+++ H+ +V V W P L + S D T +W+ DD + GH V V
Sbjct: 56 LQDGHQRTVRKVAWSPCGN----YLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCV 111
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNAS---IATLEASPSEVWQMQFDPKGTTLAVAG-G 122
A PSG + A+ S D V +++VD ++ + + +V + + P LA
Sbjct: 112 AWAPSGNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQELLASCSYD 171
Query: 123 GSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTI 182
+ V + W ATL EG T V + + P G+R+A S D T+
Sbjct: 172 NNVCVYKEEDDDWECRATL-----EGHTST--------VWGLTFDPSGQRLASCSDDCTV 218
Query: 183 SVF 185
++
Sbjct: 219 KIW 221
Score = 53 (23.7 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 25/96 (26%), Positives = 40/96 (41%)
Query: 229 DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW------DLNMRAAMQSM- 281
DA K + T H V + P A+ T D V+++ D + A S
Sbjct: 234 DAAWKCVCTLSGFHGRTVYDIAWCPLTGALATACGDDGVRVFKEDETADPDQPAFSLSAH 293
Query: 282 --TNHTDQVWGVSFRPL-GGRVVSVSDDKSISLYEY 314
HT V +++ P G +VS SD+ I+++ Y
Sbjct: 294 VPKAHTQDVNCIAWHPKEAGLLVSCSDNGEIAVWNY 329
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 207 (77.9 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 71/240 (29%), Positives = 110/240 (45%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
++ T S D+TVK+W D ++ G L + AH +A S FD T
Sbjct: 302 VVYTASHDKTVKVW--DAVK------GTLLHDLKSHAHWVNHLALSTDFVCRTGFFD-HT 352
Query: 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
AT E ++ + +++ A GG +L +A+ + L P +G KP
Sbjct: 353 KTVPATAEEKTAKAKE-RYEK-----AARVGGKIVERLV-SASDDFTMYLFDPLNDGTKP 405
Query: 152 TDKS-SSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
+ +K V V +SPDG IA D +++ KF++ L GH PV +S
Sbjct: 406 IARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFS- 464
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
D R+L +AS DT + +++ L T + GH V VD SPDG + +G D+ V+LW
Sbjct: 465 ADSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLW 524
Score = 179 (68.1 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 45/132 (34%), Positives = 66/132 (50%)
Query: 183 SVFDVTR-AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSG 241
+VF V ++ H + GH P+ +SP L + S D ++DAE + + G
Sbjct: 134 AVFKVQAVSRLAHRIPGHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKG 193
Query: 242 HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS-MTNHTDQVWGVSFRPL---- 296
HA WVL V SPDG + T S D+TV++WD + S + H V G+++ PL
Sbjct: 194 HAGWVLGVSWSPDGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWR 253
Query: 297 GG--RVVSVSDD 306
G R+VS S D
Sbjct: 254 DGTPRLVSASKD 265
Score = 168 (64.2 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 41/143 (28%), Positives = 68/143 (47%)
Query: 172 RIACGSMDGTISVFDVTR--AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
R+ S D T+ +FD K + + GH V + +SP D ++ SA D +++
Sbjct: 383 RLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSP-DGSMIASAGWDNATKLWN 441
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
A + + GH + V S D + T S D T+K+W++ + H D+V+
Sbjct: 442 ARDGKFINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDEVY 501
Query: 290 GVSFRPLGGRVVSVSDDKSISLY 312
GV + P G RV S DK++ L+
Sbjct: 502 GVDWSPDGQRVGSGGRDKAVRLW 524
Score = 167 (63.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 80/310 (25%), Positives = 124/310 (40%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H E + + PA+ R L TGS D T ++W + + T GH V+ V+ P G
Sbjct: 151 HGEPILCAQFSPASSAR---LATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDG 207
Query: 73 IIAASASLDSFVRVFDVDTNASIAT-LEASPSEVWQMQFDP-----KGTTLAVAGGGSAS 126
A+ S+D VR++D +T + + L+ V + ++P GT V+ +
Sbjct: 208 TRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFT 267
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP-DGRRIA-CGSMDGTISV 184
++W T++ R E + K S V V W +G + S D T+ V
Sbjct: 268 ARIW---------TVNTGRTEHVLSGHKGS----VSCVRWGAGNGTGVVYTASHDKTVKV 314
Query: 185 FDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHAS 244
+D + LH L+ H V L S D D T AE K TA +
Sbjct: 315 WDAVKGTLLHDLKSHAHWVNHLALS-TDFVCRTGFFDHTKTVPATAEEK---TAKAKERY 370
Query: 245 WVLSVDASPDGAAITTGSSDRTVKLWD-LNMRAA-MQSMTNHTDQVWGVSFRPLGGRVVS 302
+ + + S D T+ L+D LN + M H QV V+F P G + S
Sbjct: 371 EKAARVGGKIVERLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIAS 430
Query: 303 VSDDKSISLY 312
D + L+
Sbjct: 431 AGWDNATKLW 440
Score = 159 (61.0 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 69/268 (25%), Positives = 114/268 (42%)
Query: 58 GHCLGVVSVAAHP-SGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTT 116
GH ++ P S A+ S D+ R++D +T TL+ V + + P GT
Sbjct: 150 GHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDGTR 209
Query: 117 LAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP-----DGR 171
LA +V++WD T + + + K+V +AW P DG
Sbjct: 210 LATCSMDK-TVRIWDPETGKQVGS------------ELKGHAKWVQGIAWEPLHLWRDGT 256
Query: 172 -RIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPR-VLFSASDDTHVHMYD 229
R+ S D T ++ V + H L GH V + + + V+++AS D V ++D
Sbjct: 257 PRLVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWD 316
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289
A +L+ + HA WV + S D TG D T + A + T + +
Sbjct: 317 AVKGTLLHDLKSHAHWVNHLALSTDFVC-RTGFFDHTK-----TVPATAEEKTAKAKERY 370
Query: 290 GVSFRPLGG----RVVSVSDDKSISLYE 313
+ R +GG R+VS SDD ++ L++
Sbjct: 371 EKAAR-VGGKIVERLVSASDDFTMYLFD 397
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 235 LVTAMSGHASWVLSVDASPDGAA-ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSF 293
L + GH +L SP +A + TGS D T ++WD ++ H V GVS+
Sbjct: 144 LAHRIPGHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSW 203
Query: 294 RPLGGRVVSVSDDKSISLYE 313
P G R+ + S DK++ +++
Sbjct: 204 SPDGTRLATCSMDKTVRIWD 223
>RGD|1309030 [details] [associations]
symbol:Brwd1 "bromodomain and WD repeat domain containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0007010 "cytoskeleton organization" evidence=IEA;ISO]
[GO:0008360 "regulation of cell shape" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 RGD:1309030 GO:GO:0005737 GO:GO:0007010 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0008360
InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 OMA:NDNGERS OrthoDB:EOG470TGD
GeneTree:ENSGT00700000104382 EMBL:AC112406 IPI:IPI00762963
Ensembl:ENSRNOT00000002231 UCSC:RGD:1309030 ArrayExpress:D4AAI9
Uniprot:D4AAI9
Length = 2303
Score = 214 (80.4 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 77/302 (25%), Positives = 133/302 (44%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+ TGS D VK+W + +L T GH + +A + + A+ S D +RV+ + T
Sbjct: 201 IFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTLIAAGSCDKIIRVWCLRTC 260
Query: 93 ASIATLEASPSEVWQMQFDP--KGTT-LAVAGGGSASVKLWDTATWNLIATLSIPRPEGL 149
A +A L+ + +QF P KG V+ G +V W W+L + PRP L
Sbjct: 261 APVAVLQGHTGSITSLQFSPMAKGPQRYMVSTGADGTVCFWQ---WDLESLKFSPRP--L 315
Query: 150 KPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV--TRAKFLHHLEGHFMPVRSLV 207
K T+K +L ++S G +A GS D I ++ + + + LE H V S+
Sbjct: 316 KFTEKPRPGVQMLCSSFSVGGMFLATGSTDHVIRMYFLGFEAPEKIAELESHTDKVDSIQ 375
Query: 208 YSPVDPRVLFSASDDT-HVHMYDA-EGKSLVTAMSGHASWVLSVDAS----P-------- 253
+ R L + D T + ++ E KS++ M+ S S + P
Sbjct: 376 FCNNGDRFLSGSRDGTARIWRFEQLEWKSILLDMAARISGDTSAEEERFMKPKVTMIAWN 435
Query: 254 -DGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV-SVSDDKSISL 311
D + + T +D +K+W + ++ H D+V+ + P R++ S D SI +
Sbjct: 436 QDDSTVVTAVNDHVLKVWSSYTGQLLHNLLGHADEVFVLETHPFDSRIMLSAGHDGSIFI 495
Query: 312 YE 313
++
Sbjct: 496 WD 497
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 54/235 (22%), Positives = 97/235 (41%)
Query: 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLE------RTNTGHCL 61
+V H S+ ++ + P + +++ D TV W+ D L+ +
Sbjct: 264 AVLQGHTGSITSLQFSPMAKGPQRYMVSTGADGTVCFWQWDLESLKFSPRPLKFTEKPRP 323
Query: 62 GVVSVAAHPS--GIIAASASLDSFVRVFDVDTNA--SIATLEASPSEVWQMQFDPKGTTL 117
GV + + S G+ A+ S D +R++ + A IA LE+ +V +QF G
Sbjct: 324 GVQMLCSSFSVGGMFLATGSTDHVIRMYFLGFEAPEKIAELESHTDKVDSIQFCNNGDRF 383
Query: 118 AVAGGGSASVKLW--DTATWNLIATLSIPRPEG-LKPTDKSSSKKFVLSVAWSPDGRRIA 174
++G + ++W + W I R G ++ K V +AW+ D +
Sbjct: 384 -LSGSRDGTARIWRFEQLEWKSILLDMAARISGDTSAEEERFMKPKVTMIAWNQDDSTVV 442
Query: 175 CGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
D + V+ + LH+L GH V L P D R++ SA D + ++D
Sbjct: 443 TAVNDHVLKVWSSYTGQLLHNLLGHADEVFVLETHPFDSRIMLSAGHDGSIFIWD 497
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 202 (76.2 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 65/233 (27%), Positives = 111/233 (47%)
Query: 90 DTNASIATLEASP-SEVWQMQFDPKGTTLAVAGGGSASVKLW--DTATWNLIATLSIPRP 146
D+ ++ + A P S W + ++P GT LA GG SV++W + +W + L
Sbjct: 3 DSLVLLSRILAHPDSRCWFLAWNPAGTLLASCGG-DRSVRIWGREGDSWICKSVLC---- 57
Query: 147 EGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF--LHHLEGHFMPVR 204
EG + T V VAWSP G +A S D T ++ F + LEGH V+
Sbjct: 58 EGHQRT--------VRKVAWSPCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVK 109
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKS---LVTAMSGHASWVLSVDASPDGAAITTG 261
S+ ++P +L + S D V +++ + + V+ ++ H V V P + +
Sbjct: 110 SVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASA 168
Query: 262 SSDRTVKLW--DLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
S D TVKL+ + + ++ H VW ++F P G R+ S SDD+++ ++
Sbjct: 169 SYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221
Score = 161 (61.7 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 64/227 (28%), Positives = 92/227 (40%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDM-QLERTNT--GHCLGVVSVAAH 69
HE V +V W P+ LL T S D++V +W D+ + E + H V V H
Sbjct: 104 HENEVKSVAWAPSGN----LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWH 159
Query: 70 PSGIIAASASLDSFVRVF--DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127
PS + ASAS D V+++ + D ATLE S VW + FDP G LA +V
Sbjct: 160 PSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSD-DRTV 218
Query: 128 KLWDT---ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISV 184
++W +A T + + VAW +A D I V
Sbjct: 219 RIWRQYLPGNEQGVACSGSEASWKCVCTLSGFHSRTIYDVAWCQLTGTLATACGDDAIRV 278
Query: 185 F------DVTRAKF---LHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
F D + F H + H V + ++P + +L S SDD
Sbjct: 279 FEEDPGSDPQQPTFSLTAHVPQAHSQDVNCVAWNPKERGLLASCSDD 325
Score = 155 (59.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 61/215 (28%), Positives = 98/215 (45%)
Query: 66 VAAHPSGIIAASASLDSFVRVFDVDTNASIAT---LEASPSEVWQMQFDPKGTTLAVAGG 122
+A +P+G + AS D VR++ + ++ I E V ++ + P G LA A
Sbjct: 22 LAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSPCGNYLASASF 81
Query: 123 GSASVKLW--DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG 180
A+ +W + + + TL EG + V SVAW+P G +A S D
Sbjct: 82 -DATTCIWKKNEDDFECVTTL-----EG--------HENEVKSVAWAPSGNLLATCSRDK 127
Query: 181 TISVFDVTRA---KFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLV- 236
++ V++V + + L H V+ +V+ P +L SAS D V +Y E V
Sbjct: 128 SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP-SQELLASASYDDTVKLYREEEDDWVC 186
Query: 237 -TAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
+ GH S V S+ P G + + S DRTV++W
Sbjct: 187 CATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221
Score = 138 (53.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 58/187 (31%), Positives = 85/187 (45%)
Query: 7 KSVE-NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRP--DDMQLERTNTGHCLGV 63
KSV H+ +V V W P L + S D T +W+ DD + T GH V
Sbjct: 53 KSVLCEGHQRTVRKVAWSPCGN----YLASASFDATTCIWKKNEDDFECVTTLEGHENEV 108
Query: 64 VSVAAHPSGIIAASASLDSFVRVFDVDTNAS---IATLEASPSEVWQMQFDPKGTTLAVA 120
SVA PSG + A+ S D V V++VD ++ L + +V + + P LA A
Sbjct: 109 KSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASA 168
Query: 121 GGGSASVKLW--DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSM 178
+VKL+ + W ATL EG + T V S+A+ P G+R+A S
Sbjct: 169 SYDD-TVKLYREEEDDWVCCATL-----EGHEST--------VWSLAFDPSGQRLASCSD 214
Query: 179 DGTISVF 185
D T+ ++
Sbjct: 215 DRTVRIW 221
Score = 44 (20.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/96 (20%), Positives = 40/96 (41%)
Query: 229 DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQ----SMTNH 284
+A K + T H+ + V + T D +++++ + + Q S+T H
Sbjct: 238 EASWKCVCTLSGFHSRTIYDVAWCQLTGTLATACGDDAIRVFEEDPGSDPQQPTFSLTAH 297
Query: 285 TDQVWG-----VSFRPLG-GRVVSVSDDKSISLYEY 314
Q V++ P G + S SDD ++ ++Y
Sbjct: 298 VPQAHSQDVNCVAWNPKERGLLASCSDDGELAFWKY 333
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 206 (77.6 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 77/307 (25%), Positives = 134/307 (43%)
Query: 9 VENAHEESVWAVTWVPATETRPAL--LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSV 66
V H + + + W P P L + S D ++++W + ++ TGH V V
Sbjct: 207 VLTGHSKWITCLCWEPL-HINPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCV 265
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
G++ +S S D ++V+ TL+ V M T + G
Sbjct: 266 KWGGDGLLYSS-SQDRTIKVWRSQDGILCRTLQGHAHWVNTMALS---TDYVLRTGAFEP 321
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFD 186
+ AT N +S E LK DK+ +++ P+ R+ GS D T+ ++
Sbjct: 322 AE----ATINP-QDMSGSLAE-LK--DKAQ-QRYDKVRGQGPE--RLVSGSDDFTLFLWR 370
Query: 187 VTRAKF-LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASW 245
K L + GH + +++SP D R++ SAS D + +++ +T++ GH S
Sbjct: 371 PAEDKKPLERMTGHQALINQVLFSP-DTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSA 429
Query: 246 VLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSD 305
V + S D + +GSSD T+K+WD + + H D+V+ + P G RV S
Sbjct: 430 VYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGK 489
Query: 306 DKSISLY 312
DK + ++
Sbjct: 490 DKCLRIW 496
Score = 196 (74.1 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 74/264 (28%), Positives = 123/264 (46%)
Query: 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117
GH V+SVA P+G AS S D+ VR +D+ T T + V + + P G L
Sbjct: 125 GHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKL 184
Query: 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW-----SPDGRR 172
A +G ++ + LWD AT N I G T S K++ + W +P+ R
Sbjct: 185 A-SGCKNSQIFLWDPATGNQI---------GRVLTGHS---KWITCLCWEPLHINPECRY 231
Query: 173 IACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG 232
+A S DG+I ++D + L GH V + + +L+S+S D + ++ ++
Sbjct: 232 LASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWG--GDGLLYSSSQDRTIKVWRSQD 289
Query: 233 KSLVTAMSGHASWVLSVDASPDGAAITTGS---SDRTVKLWDLNMRAAMQSMTNHTDQVW 289
L + GHA WV ++ S D + TG+ ++ T+ D M ++ + + Q +
Sbjct: 290 GILCRTLQGHAHWVNTMALSTD-YVLRTGAFEPAEATINPQD--MSGSLAELKDKAQQRY 346
Query: 290 GVSFRPLGG-RVVSVSDDKSISLY 312
R G R+VS SDD ++ L+
Sbjct: 347 D-KVRGQGPERLVSGSDDFTLFLW 369
Score = 181 (68.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 57/180 (31%), Positives = 87/180 (48%)
Query: 96 ATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKS 155
++LE V + F P G LA +G G +V+ WD LS P+ T K
Sbjct: 121 SSLEGHTEAVISVAFSPTGKYLA-SGSGDTTVRFWD---------LSTETPQF---TAKG 167
Query: 156 SSKKFVLSVAWSPDGRRIACGSMDGTISVFD-VTRAKFLHHLEGHFMPVRSLVYSP--VD 212
+ +VLS+AWSPDG+++A G + I ++D T + L GH + L + P ++
Sbjct: 168 H-RHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHIN 226
Query: 213 P--RVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
P R L SAS D + ++D ++GH V V DG + + S DRT+K+W
Sbjct: 227 PECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWGGDGL-LYSSSQDRTIKVW 285
Score = 159 (61.0 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 73/309 (23%), Positives = 126/309 (40%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRP-DDMQLERTNTGH-----CLGVVSV 66
H V ++ W P + L +G + + LW P Q+ R TGH CL +
Sbjct: 168 HRHWVLSIAWSPDGKK----LASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPL 223
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126
+P ASAS D +R++D L V +++ G L + +
Sbjct: 224 HINPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWGGDG--LLYSSSQDRT 281
Query: 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSV-AWSPDGRRIACGSMDGTISVF 185
+K+W + L TL + + S +VL A+ P I M G++
Sbjct: 282 IKVWRSQDGILCRTL---QGHAHWVNTMALSTDYVLRTGAFEPAEATINPQDMSGSL--- 335
Query: 186 DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY-DAEGKSLVTAMSGHAS 244
A+ + + VR P L S SDD + ++ AE K + M+GH +
Sbjct: 336 ----AELKDKAQQRYDKVRGQ-----GPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQA 386
Query: 245 WVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVS 304
+ V SPD I + S D+++KLW+ + S+ H V+ +++ +VS S
Sbjct: 387 LINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGS 446
Query: 305 DDKSISLYE 313
D ++ +++
Sbjct: 447 SDSTLKVWD 455
>UNIPROTKB|F1NLV4 [details] [associations]
symbol:GNB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001750 "photoreceptor outer segment" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0005834 GeneTree:ENSGT00550000074331
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:AADN02040871
IPI:IPI00596111 Ensembl:ENSGALT00000002040
Ensembl:ENSGALT00000040376 Uniprot:F1NLV4
Length = 403
Score = 204 (76.9 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 54/221 (24%), Positives = 103/221 (46%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
TL ++++ M + + L V+ + +WD+ T N + + + +SS
Sbjct: 50 TLRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIPL----------RSS 98
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDV-TR---AKFLHHLEGHFMPVRSLVYSPVD 212
+V++ A++P G +ACG +D S++++ TR + L GH + + +D
Sbjct: 99 ---WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LD 153
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ ++S DT ++D E T +GH V+S+ +PD +G+ D + KLWD+
Sbjct: 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDARCFVSGACDASAKLWDV 213
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
Q+ T H + + F P G + SDD + L++
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 254
Score = 133 (51.9 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 60/277 (21%), Positives = 114/277 (41%)
Query: 21 TWVPATETRPA--LLLTGSLDETVKLW----RPDDMQLERTNTGHCLGVVSVAAHPSGII 74
+WV P+ + G LD ++ R ++++ R GH G +S
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHT-GYLSCCRFLDDNQ 156
Query: 75 AASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT 134
++S D+ ++D++T T +V + P V+G AS KLWD
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDARCF-VSGACDASAKLWDVR- 214
Query: 135 WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFL- 193
EG+ + + + ++ + P+G A GS D T +FD+ + L
Sbjct: 215 ------------EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Query: 194 -HHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS 252
+ + + S+ +S R+L + DD + +++D ++GH + V + +
Sbjct: 263 VYSHDNIICGITSVAFSK-SGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVT 321
Query: 253 PDGAAITTGSSDRTV-KL-WDLNMRAAMQSMTNHTDQ 287
DG GS +R + +L DL ++ S+T + Q
Sbjct: 322 DDG-----GSGNRIMGQLPQDLELKRVADSVTGRSFQ 353
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 62/287 (21%), Positives = 112/287 (39%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLG-----VVSVA 67
H ++A+ W T++R LL++ S D + +W D TN H + V++ A
Sbjct: 54 HLAKIYAMHW--GTDSR--LLVSASQDGKLIIW--DSYT---TNKVHAIPLRSSWVMTCA 104
Query: 68 AHPSGIIAASASLDSFVRVFDVDT---NASIAT-LEASPSEVWQMQFDPKGTTLAVAGGG 123
PSG A LD+ ++++ T N ++ L + +F V G
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSG 162
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
+ LWD T G + T + V+S++ +PD R G+ D +
Sbjct: 163 DTTCALWDIET-------------GQQTTTFTGHTGDVMSLSLAPDARCFVSGACDASAK 209
Query: 184 VFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD--AEGKSLVTAMSG 241
++DV GH + ++ + P + + SDD ++D A+ + +V +
Sbjct: 210 LWDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMVYSHDN 268
Query: 242 HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQV 288
+ SV S G + G D +WD + H ++V
Sbjct: 269 IICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRV 315
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 206 (77.6 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 58/206 (28%), Positives = 97/206 (47%)
Query: 112 PKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDK----SSSKKFVLSVAWS 167
P G T AV G+A ++A A ++P+P+ P S +V +A
Sbjct: 160 PAGMTSAVMEAGNAK----NSALMAKKAP-TMPKPQWHPPWKLYRVISGHLGWVRCIAVE 214
Query: 168 PDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 227
P + GS D TI ++D+ K L GH VR ++ S P LFS +D V
Sbjct: 215 PGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP-YLFSCGEDKQVKC 273
Query: 228 YDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQ 287
+D E ++ GH S V +D P + T S D T ++WD+ +A++ +++ HT+
Sbjct: 274 WDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNA 333
Query: 288 VWGVSFRPLGGRVVSVSDDKSISLYE 313
V V + ++++ S D +I L++
Sbjct: 334 VATVRCQAAEPQIITGSHDTTIRLWD 359
Score = 183 (69.5 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 71/302 (23%), Positives = 127/302 (42%)
Query: 22 WVPATETRPA--LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASAS 79
WV P +TGS D T+K+W +L+ + TGH V V S
Sbjct: 207 WVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCG 266
Query: 80 LDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIA 139
D V+ +D++ N I S V+ + P L S + ++WD T +
Sbjct: 267 EDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTA-RIWDVRTKASVH 325
Query: 140 TLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGH 199
TLS +++ V A P +I GS D TI ++D+ K L H
Sbjct: 326 TLS----------GHTNAVATVRCQAAEP---QIITGSHDTTIRLWDLVAGKTRVTLTNH 372
Query: 200 FMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAIT 259
VR++V P F++ ++ + S + +SGH + + ++ + DG ++
Sbjct: 373 KKSVRAVVLHP--RHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVS 430
Query: 260 TGSSDRTVKLWDLN-------MRAAMQSMTNHTDQ-VWGVSFRPLGGRVVSVSDDKSISL 311
G+ + T+ LWD + AA+Q + ++ ++ +F R+++ DK+I +
Sbjct: 431 -GADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKV 489
Query: 312 YE 313
Y+
Sbjct: 490 YK 491
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 58/241 (24%), Positives = 102/241 (42%)
Query: 45 WRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSE 104
W P +L R +GH V +A P + S D ++++D+ + +L S
Sbjct: 191 WHPP-WKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHIST 249
Query: 105 VWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSV 164
V + + L + G VK WD +N + I G S + L +
Sbjct: 250 VRGVIVSTRSPYL-FSCGEDKQVKCWDLE-YNKV----IRHYHG------HLSAVYGLDL 297
Query: 165 AWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTH 224
+ D + C S D T ++DV +H L GH V ++ +P+++ + S DT
Sbjct: 298 HPTIDVL-VTC-SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQII-TGSHDTT 354
Query: 225 VHMYD-AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN 283
+ ++D GK+ VT ++ H V +V P +GS D +K W + +Q+++
Sbjct: 355 IRLWDLVAGKTRVT-LTNHKKSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFIQNLSG 412
Query: 284 H 284
H
Sbjct: 413 H 413
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 201 (75.8 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 61/228 (26%), Positives = 109/228 (47%)
Query: 99 EASPSEVWQMQFDPKGTTLAVAGGGSASVKLW--DT-ATWNLIATLSIPRPEGLKPTDKS 155
EA +VW + + P G LA +++W DT W L+ +L EG
Sbjct: 21 EAPYDKVWNLAWHPNGEILATCANDKY-IQIWSKDTNGKWGLVQSL-----EG------- 67
Query: 156 SSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR--AKFLH--HLEGHFMPVRSLVYSPV 211
+K V VAWSP GR +A S D + S+++ ++ +F H LEGH V+S+ +
Sbjct: 68 -HEKTVRRVAWSPCGRFLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDST 126
Query: 212 DPRVLFSASDDTHVHMYDAEGKS---LVTAMSGHASWVLSVDASPDGAAITTGSSDRTVK 268
+L + S D + ++ E + ++ SGH + V P+ + + S D T+K
Sbjct: 127 GT-LLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNEELLASSSYDDTIK 185
Query: 269 LW-DLNMR-AAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
W D++ + ++T H +W ++F G ++VS +DK + +++
Sbjct: 186 FWKDIDGDWECINTLTGHESSIWDLAFNKDGDKLVSCGEDKLVLFWKF 233
Score = 171 (65.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 65/263 (24%), Positives = 117/263 (44%)
Query: 63 VVSVAAHPSGIIAASASLDSFVRVFDVDTNAS---IATLEASPSEVWQMQFDPKGTTLAV 119
V ++A HP+G I A+ + D +++++ DTN + +LE V ++ + P G LA
Sbjct: 27 VWNLAWHPNGEILATCANDKYIQIWSKDTNGKWGLVQSLEGHEKTVRRVAWSPCGRFLAG 86
Query: 120 AGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMD 179
A AS +W+ + L T + EG T + V SVAW G +A S D
Sbjct: 87 ASF-DASTSIWEKSKDELEFT-HVSSLEG--HTYE------VKSVAWDSTGTLLATCSRD 136
Query: 180 GTISVF---DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGK-SL 235
+I ++ D + L GH ++ +++ P + + S+ DDT D +G
Sbjct: 137 KSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNEELLASSSYDDTIKFWKDIDGDWEC 196
Query: 236 VTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA----MQSMTNHTDQ-VWG 290
+ ++GH S + + + DG + + D+ V W + + N + ++
Sbjct: 197 INTLTGHESSIWDLAFNKDGDKLVSCGEDKLVLFWKFDKENEKWINIFKFKNENSRPIYS 256
Query: 291 VSFRPLGGRVVSVSDDKSISLYE 313
+ + L +V+ S D SI YE
Sbjct: 257 IDWSSLTNTIVTGSADDSIIFYE 279
Score = 156 (60.0 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 65/245 (26%), Positives = 109/245 (44%)
Query: 1 MKFAGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWR-PDDMQLE--RTNT 57
++F + S+E H V +V W +T T LL T S D+++ +W+ DD E N+
Sbjct: 103 LEFTHVSSLEG-HTYEVKSVAW-DSTGT---LLATCSRDKSIWIWQMEDDNDFECLSINS 157
Query: 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVF-DVDTN-ASIATLEASPSEVWQMQFDPKGT 115
GH + V HP+ + AS+S D ++ + D+D + I TL S +W + F+ G
Sbjct: 158 GHGQDIKCVLWHPNEELLASSSYDDTIKFWKDIDGDWECINTLTGHESSIWDLAFNKDGD 217
Query: 116 TLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIAC 175
L V+ G V W N ++I + K+ + + + S+ WS I
Sbjct: 218 KL-VSCGEDKLVLFWKFDKENE-KWINIFK-------FKNENSRPIYSIDWSSLTNTIVT 268
Query: 176 GSMDGTISVF----DVTRAKF---LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
GS D +I + D T K+ L H V ++P +L S DD + ++
Sbjct: 269 GSADDSIIFYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFKNILASCGDDGFIKIW 328
Query: 229 DAEGK 233
+ + K
Sbjct: 329 ELQDK 333
Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00019
Identities = 65/294 (22%), Positives = 123/294 (41%)
Query: 2 KFAGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNT---- 57
K+ ++S+E HE++V V W P L S D + +W +LE T+
Sbjct: 58 KWGLVQSLEG-HEKTVRRVAWSPCGR----FLAGASFDASTSIWEKSKDELEFTHVSSLE 112
Query: 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPS---EVWQMQFDPKG 114
GH V SVA +G + A+ S D + ++ ++ + L + ++ + + P
Sbjct: 113 GHTYEVKSVAWDSTGTLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNE 172
Query: 115 TTLAVAGGGSASVKLWDT--ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRR 172
LA + ++K W W I TL T SS + +A++ DG +
Sbjct: 173 ELLA-SSSYDDTIKFWKDIDGDWECINTL----------TGHESS---IWDLAFNKDGDK 218
Query: 173 -IACGSMDGTISV--FDVTRAKFLHHLE---GHFMPVRSLVYSPVDPRVLFSASDDTHVH 226
++CG D + FD K+++ + + P+ S+ +S + ++ ++DD+ +
Sbjct: 219 LVSCGE-DKLVLFWKFDKENEKWINIFKFKNENSRPIYSIDWSSLTNTIVTGSADDSII- 276
Query: 227 MYDAEG-------KSLVTAMSGHASWVLSVDASPDGAAITTG-SSDRTVKLWDL 272
Y+ E K ++ + H S V +P I D +K+W+L
Sbjct: 277 FYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFKNILASCGDDGFIKIWEL 330
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 200 (75.5 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 56/179 (31%), Positives = 90/179 (50%)
Query: 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAH 69
E+ H + V V + P + P ++ G D TVK+W + +L+ + GH + +V
Sbjct: 145 EDGHTDWVSCVRFSP-NHSNPIIVSCG-WDRTVKVWNLANCKLKNNHHGHNGYLNTVTVS 202
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
P G + S DS ++D++ ++ TLE + + + F P L VA G S+K+
Sbjct: 203 PDGSLCTSGGKDSKALLWDLNDGKNLYTLEHNDI-INALCFSPNRYWLCVAYG--PSIKI 259
Query: 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 188
WD A + L RPE + PT K+ + LS+AWS DG+ + G D TI V+ V+
Sbjct: 260 WDLACKKTVEEL---RPEVVSPTSKADQPQ-CLSLAWSTDGQTLFAGYSDNTIRVWQVS 314
Score = 187 (70.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 74/257 (28%), Positives = 112/257 (43%)
Query: 48 DDMQLERTNTGHCLGVVSVAAHPSGI-IAASASLDSFVRVF----DVDTNASIAT--LEA 100
+ +QL T GH V +A +P SAS D + V+ D DTN L
Sbjct: 3 ETLQLRGTLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYG 62
Query: 101 SPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKF 160
+ + G A++G +++LWD A A + R EG K
Sbjct: 63 HSHFISDVVLSSDGN-YALSGSWDQTLRLWDLA-----AGKTTRRFEG--------HTKD 108
Query: 161 VLSVAWSPDGRRIACGSMDGTISVFD-VTRAKFLHHLEGHFMPVRSLVYSPVDPR-VLFS 218
VLSVA+S D R+I GS D TI +++ + KF +GH V + +SP ++ S
Sbjct: 109 VLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVS 168
Query: 219 ASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAM 278
D V +++ L GH ++ +V SPDG+ T+G D LWDLN +
Sbjct: 169 CGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNL 228
Query: 279 QSMTNHTDQVWGVSFRP 295
++ H D + + F P
Sbjct: 229 YTL-EHNDIINALCFSP 244
Score = 155 (59.6 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 45/157 (28%), Positives = 68/157 (43%)
Query: 160 FVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSA 219
F+ V S DG GS D T+ ++D+ K EGH V S+ +S D R + S
Sbjct: 66 FISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFS-ADNRQIVSG 124
Query: 220 SDDTHVHMYDAEGKSLVTAMS-GHASWVLSVDASPDGA--AITTGSSDRTVKLWDLNMRA 276
S D + +++ + T GH WV V SP+ + I + DRTVK+W+L
Sbjct: 125 SRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCK 184
Query: 277 AMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ H + V+ P G S D L++
Sbjct: 185 LKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWD 221
Score = 146 (56.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 62/274 (22%), Positives = 120/274 (43%)
Query: 18 WAVTWVPATETRPALLLTGSLDETVKLW---RPDDMQL---ERTNTGHCLGVVSVAAHPS 71
W VT + P +++ S D+T+ +W R +D ++ GH + V
Sbjct: 17 W-VTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSD 75
Query: 72 GIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWD 131
G A S S D +R++D+ + E +V + F + V+G ++KLW+
Sbjct: 76 GNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQI-VSGSRDKTIKLWN 134
Query: 132 TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRR---IACGSMDGTISVFDVT 188
T +I + +G TD +V V +SP+ ++CG D T+ V+++
Sbjct: 135 TLAE---CKFTI-QEDG--HTD------WVSCVRFSPNHSNPIIVSCG-WDRTVKVWNLA 181
Query: 189 RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA-EGKSLVTAMSGHASWVL 247
K ++ GH + ++ SP D + S D+ ++D +GK+L T H +
Sbjct: 182 NCKLKNNHHGHNGYLNTVTVSP-DGSLCTSGGKDSKALLWDLNDGKNLYTLE--HNDIIN 238
Query: 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSM 281
++ SP+ + ++K+WDL + ++ +
Sbjct: 239 ALCFSPNRYWLCVAYGP-SIKIWDLACKKTVEEL 271
Score = 139 (54.0 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 60/255 (23%), Positives = 106/255 (41%)
Query: 34 LTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA 93
L+GS D+T++LW + R GH V+SVA S S D +++++
Sbjct: 80 LSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAEC 139
Query: 94 SIATLEASPSEVWQ--MQFDPKGTT-LAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150
E ++ W ++F P + + V+ G +VK+W+ A L
Sbjct: 140 KFTIQEDGHTD-WVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKL------------- 185
Query: 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210
+ ++ +V SPDG G D ++D+ K L+ LE H + +L +SP
Sbjct: 186 KNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE-HNDIINALCFSP 244
Query: 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAM-------SGHASW--VLSVDASPDGAAITTG 261
R + + ++D K V + + A LS+ S DG + G
Sbjct: 245 --NRYWLCVAYGPSIKIWDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAG 302
Query: 262 SSDRTVKLWDLNMRA 276
SD T+++W +++ A
Sbjct: 303 YSDNTIRVWQVSVSA 317
Score = 138 (53.6 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 51/165 (30%), Positives = 78/165 (47%)
Query: 160 FVLSVAWSP-DGRRIACGSMDGTISVFDVTRAKFLHH------LEGHFMPVRSLVYSPVD 212
+V +A +P D I S D T+ V+ +TR + ++ L GH + +V S D
Sbjct: 17 WVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSS-D 75
Query: 213 PRVLFSASDDTHVHMYD-AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
S S D + ++D A GK+ GH VLSV S D I +GS D+T+KLW+
Sbjct: 76 GNYALSGSWDQTLRLWDLAAGKT-TRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN 134
Query: 272 L--NMRAAMQSMTNHTDQVWGVSFRPLGGR--VVSVSDDKSISLY 312
+ +Q HTD V V F P +VS D+++ ++
Sbjct: 135 TLAECKFTIQE-DGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVW 178
Score = 129 (50.5 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 38/123 (30%), Positives = 58/123 (47%)
Query: 196 LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY------DAEGKSLVTAMSGHASWVLSV 249
L GH V + +P DP + SAS D + ++ D + GH+ ++ V
Sbjct: 11 LIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDV 70
Query: 250 DASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSI 309
S DG +GS D+T++LWDL + HT V V+F ++VS S DK+I
Sbjct: 71 VLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTI 130
Query: 310 SLY 312
L+
Sbjct: 131 KLW 133
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 204 (76.9 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 75/261 (28%), Positives = 117/261 (44%)
Query: 77 SASLDSFVRVFD--VDTNA--SIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
SAS+D + +++ V+ N ++ V + D GT +G +K+W T
Sbjct: 160 SASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTGTKFC-SGSWDKMLKIWST 218
Query: 133 ATWNLIATL--SIPRPEGLKPTDK-----------SSSKKFVLSVAWSPDGRRIACGSMD 179
+ + S RP + T++ S K+ + SV WS D I S D
Sbjct: 219 VPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLWS-DAEEICSASWD 277
Query: 180 GTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGK--SLVT 237
TI V+DV L G+ + + YSP+ R L S S D H+ ++D K SLV+
Sbjct: 278 HTIKVWDVESGSLKSTLTGNKV-FNCISYSPLCKR-LASGSTDRHIRLWDPRTKDGSLVS 335
Query: 238 -AMSGHASWVLSVDASPDGAA-ITTGSSDRTVKLWDL-NMRAAMQSMTNHTDQVWGVSFR 294
+++ H WV SV SP + +GS D VKLWD + +A + + H D+V V +
Sbjct: 336 LSLTSHTGWVTSVKWSPTHEQQLISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDWT 395
Query: 295 PLGGRVVSVSDDKSISLYEYS 315
G ++S D + Y YS
Sbjct: 396 D-SGLLLSGGADNKLYSYRYS 415
Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
Identities = 44/170 (25%), Positives = 79/170 (46%)
Query: 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHP 70
+ H+E++ +V W A E + + S D T+K+W + L+ T TG+ + ++ P
Sbjct: 254 SGHKEAISSVLWSDAEE-----ICSASWDHTIKVWDVESGSLKSTLTGNKV-FNCISYSP 307
Query: 71 SGIIAASASLDSFVRVFDVDT-NASIATLEASPSEVW--QMQFDPKGTTLAVAGGGSASV 127
AS S D +R++D T + S+ +L + W +++ P ++G V
Sbjct: 308 LCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNMV 367
Query: 128 KLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS 177
KLWDT + A L D ++ + VLSV W+ G ++ G+
Sbjct: 368 KLWDTRSCK--APLY----------DLAAHEDKVLSVDWTDSGLLLSGGA 405
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 205 (77.2 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 80/302 (26%), Positives = 138/302 (45%)
Query: 31 ALLLTGSLDETVKLWRPDDM-QLERTNTG-HCLGVVSVAAHPSGIIAASASLDSFVRVFD 88
ALL T SLD+T++L+ D +L + H V PSG + AS S D ++
Sbjct: 23 ALLATCSLDKTIRLYSLSDFAELPYSPLKFHTYAVHCCCFSPSGHVLASCSTDGTTVLWS 82
Query: 89 VDTNASIATLEA-SPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE 147
+ ++ LE S V F P LA +G S+ LW+ T+ L S+
Sbjct: 83 SHSGHTLTVLEQPGGSPVRVCCFSPDSAYLA-SGAADGSIALWNAQTYKLYRCGSV---- 137
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLV 207
K SS +++ A+SPDG GS G ++V+D R + LH + H + +
Sbjct: 138 ------KDSS---LVACAFSPDGGLFVTGSSGGDLTVWD-DRMRCLHSEKAHDLGITCCS 187
Query: 208 YS--PVD------PRVLFSASDDTHVHMYDAE-----GKSLV--TAMSGHASWVLSVDAS 252
+S P+ L S D + ++ G L + +SGH + VL+ S
Sbjct: 188 FSSQPLSGGEGLQSYQLASCGQDCEIKLWAVTITRVLGFELKYKSTLSGHCAPVLACAFS 247
Query: 253 PDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
DG + +GS D++V + + ++ + ++T HT V +F P + + S DK+++++
Sbjct: 248 HDGKMLASGSVDKSVIIHGIGPQSVLHTLTQHTRYVTTCAFAPNTLLLATGSMDKTVNIW 307
Query: 313 EY 314
++
Sbjct: 308 QF 309
Score = 135 (52.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 56/232 (24%), Positives = 94/232 (40%)
Query: 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129
P AS + D + +++ T S + F P G L V G + +
Sbjct: 107 PDSAYLASGAADGSIALWNAQTYKLYRCGSVKDSSLVACAFSPDGG-LFVTGSSGGDLTV 165
Query: 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIA-CGSMDGTISVFDVT 188
WD + + L + L T S S + LS ++A CG D I ++ VT
Sbjct: 166 WD----DRMRCLHSEKAHDLGITCCSFSSQ-PLSGGEGLQSYQLASCGQ-DCEIKLWAVT 219
Query: 189 -------RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSG 241
K+ L GH PV + +S D ++L S S D V ++ +S++ ++
Sbjct: 220 ITRVLGFELKYKSTLSGHCAPVLACAFSH-DGKMLASGSVDKSVIIHGIGPQSVLHTLTQ 278
Query: 242 HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN----HTDQVW 289
H +V + +P+ + TGS D+TV +W ++ Q N H + W
Sbjct: 279 HTRYVTTCAFAPNTLLLATGSMDKTVNIWQFDLETPCQGSMNDPLKHFTEEW 330
>MGI|MGI:1890651 [details] [associations]
symbol:Brwd1 "bromodomain and WD repeat domain containing 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007010 "cytoskeleton organization" evidence=ISO] [GO:0008360
"regulation of cell shape" evidence=ISO] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
MGI:MGI:1890651 GO:GO:0005634 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006357
GO:GO:0006351 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 CTD:54014 HOVERGEN:HBG080933 KO:K11798
ChiTaRS:BRWD1 EMBL:AJ292467 EMBL:AJ292468 EMBL:AC144797
EMBL:AC152502 IPI:IPI00121655 IPI:IPI01007673 RefSeq:NP_001096649.1
RefSeq:NP_660107.2 UniGene:Mm.240871 UniGene:Mm.482469
ProteinModelPortal:Q921C3 SMR:Q921C3 IntAct:Q921C3
PhosphoSite:Q921C3 PRIDE:Q921C3 Ensembl:ENSMUST00000023631
Ensembl:ENSMUST00000099502 Ensembl:ENSMUST00000113829 GeneID:93871
KEGG:mmu:93871 UCSC:uc008aci.2 UCSC:uc008ack.2
GeneTree:ENSGT00700000104382 HOGENOM:HOG000095265 InParanoid:Q921C3
NextBio:351749 Bgee:Q921C3 CleanEx:MM_BRWD1 Genevestigator:Q921C3
GermOnline:ENSMUSG00000022914 Uniprot:Q921C3
Length = 2304
Score = 213 (80.0 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 76/302 (25%), Positives = 133/302 (44%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+ TGS D VK+W + +L T GH + +A + + A+ S D +RV+ + T
Sbjct: 201 IFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTLIAAGSCDKIIRVWCLRTC 260
Query: 93 ASIATLEASPSEVWQMQFDP--KGTT-LAVAGGGSASVKLWDTATWNLIATLSIPRPEGL 149
A +A L+ + +QF P KG V+ G +V W W+L + PRP L
Sbjct: 261 APVAVLQGHTGSITSLQFSPMAKGPQRYMVSTGADGTVCFWQ---WDLESLKFSPRP--L 315
Query: 150 KPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV--TRAKFLHHLEGHFMPVRSLV 207
K T+K +L ++S G +A GS D I ++ + + + LE H V S+
Sbjct: 316 KFTEKPRPGVQMLCSSFSVGGMFLATGSTDHVIRMYFLGFDAPEKIAELESHTDKVDSIQ 375
Query: 208 YSPVDPRVLFSASDDT-HVHMYDA-EGKSLVTAMSGHASW-------------VLSVDAS 252
+ R L + D T + ++ E +S++ MS S V + +
Sbjct: 376 FCNNGDRFLSGSRDGTARIWRFEQLEWRSILLDMSARISGDTSSEEERFMKPKVTMIAWN 435
Query: 253 PDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV-SVSDDKSISL 311
D + + T +D +K+W + ++ H D+V+ + P R++ S D SI +
Sbjct: 436 QDDSTVVTAVNDHVLKVWSSYTGQLLHNLLGHADEVFVLETHPFDSRIMLSAGHDGSIFI 495
Query: 312 YE 313
++
Sbjct: 496 WD 497
Score = 140 (54.3 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 54/235 (22%), Positives = 98/235 (41%)
Query: 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLE------RTNTGHCL 61
+V H S+ ++ + P + +++ D TV W+ D L+ +
Sbjct: 264 AVLQGHTGSITSLQFSPMAKGPQRYMVSTGADGTVCFWQWDLESLKFSPRPLKFTEKPRP 323
Query: 62 GVVSVAAHPS--GIIAASASLDSFVRVFDV--DTNASIATLEASPSEVWQMQFDPKGTTL 117
GV + + S G+ A+ S D +R++ + D IA LE+ +V +QF G
Sbjct: 324 GVQMLCSSFSVGGMFLATGSTDHVIRMYFLGFDAPEKIAELESHTDKVDSIQFCNNGDRF 383
Query: 118 AVAGGGSASVKLW--DTATWNLIATLSIPRPEGLKPTDKSS-SKKFVLSVAWSPDGRRIA 174
++G + ++W + W I R G +++ K V +AW+ D +
Sbjct: 384 -LSGSRDGTARIWRFEQLEWRSILLDMSARISGDTSSEEERFMKPKVTMIAWNQDDSTVV 442
Query: 175 CGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
D + V+ + LH+L GH V L P D R++ SA D + ++D
Sbjct: 443 TAVNDHVLKVWSSYTGQLLHNLLGHADEVFVLETHPFDSRIMLSAGHDGSIFIWD 497
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 201 (75.8 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 54/221 (24%), Positives = 103/221 (46%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
TL ++++ M + + L V+ + +WD+ T N + + + +SS
Sbjct: 50 TLRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIPL----------RSS 98
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDV-TR---AKFLHHLEGHFMPVRSLVYSPVD 212
+V++ A++P G +ACG +D S++++ TR + L GH + + +D
Sbjct: 99 ---WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LD 153
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ ++S DT ++D E T +GH V+S+ +PD +G+ D + KLWD+
Sbjct: 154 DNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
Q+ T H + + F P G + SDD + L++
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 254
Score = 177 (67.4 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 61/259 (23%), Positives = 112/259 (43%)
Query: 21 TWVPATETRPA--LLLTGSLDETVKLW----RPDDMQLERTNTGHCLGVVSVAAHPSGII 74
+WV P+ + G LD ++ R ++++ R GH G +S
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHT-GYLSCCRFLDDNQ 156
Query: 75 AASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT 134
++S D+ ++D++T T +V + P T L V+G AS KLWD
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPD-TRLFVSGACDASAKLWDVR- 214
Query: 135 WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFL- 193
EG+ + + + ++ + P+G A GS D T +FD+ + L
Sbjct: 215 ------------EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Query: 194 -HHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS 252
+ + + S+ +S R+L + DD + +++DA ++GH + V + +
Sbjct: 263 VYSHDNIICGITSVAFSK-SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT 321
Query: 253 PDGAAITTGSSDRTVKLWD 271
DG A+ TGS D +K+W+
Sbjct: 322 DDGMAVATGSWDSFLKIWN 340
Score = 130 (50.8 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 66/311 (21%), Positives = 121/311 (38%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLG-----VVSVA 67
H ++A+ W T++R LL++ S D + +W D TN H + V++ A
Sbjct: 54 HLAKIYAMHW--GTDSR--LLVSASQDGKLIIW--DSYT---TNKVHAIPLRSSWVMTCA 104
Query: 68 AHPSGIIAASASLDSFVRVFDVDT---NASIAT-LEASPSEVWQMQFDPKGTTLAVAGGG 123
PSG A LD+ ++++ T N ++ L + +F V G
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSG 162
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
+ LWD T G + T + V+S++ +PD R G+ D +
Sbjct: 163 DTTCALWDIET-------------GQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAK 209
Query: 184 VFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD--AEGKSLVTAMSG 241
++DV GH + ++ + P + + SDD ++D A+ + +V +
Sbjct: 210 LWDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMVYSHDN 268
Query: 242 HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301
+ SV S G + G D +WD + H ++V + G V
Sbjct: 269 IICGITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA 328
Query: 302 SVSDDKSISLY 312
+ S D + ++
Sbjct: 329 TGSWDSFLKIW 339
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 201 (75.8 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 54/221 (24%), Positives = 103/221 (46%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
TL ++++ M + + L V+ + +WD+ T N + + + +SS
Sbjct: 50 TLRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIPL----------RSS 98
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDV-TR---AKFLHHLEGHFMPVRSLVYSPVD 212
+V++ A++P G +ACG +D S++++ TR + L GH + + +D
Sbjct: 99 ---WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LD 153
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ ++S DT ++D E T +GH V+S+ +PD +G+ D + KLWD+
Sbjct: 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
Q+ T H + + F P G + SDD + L++
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 254
Score = 175 (66.7 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 61/259 (23%), Positives = 112/259 (43%)
Query: 21 TWVPATETRPA--LLLTGSLDETVKLW----RPDDMQLERTNTGHCLGVVSVAAHPSGII 74
+WV P+ + G LD ++ R ++++ R GH G +S
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHT-GYLSCCRFLDDNQ 156
Query: 75 AASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT 134
++S D+ ++D++T T +V + P T L V+G AS KLWD
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD-TRLFVSGACDASAKLWDVR- 214
Query: 135 WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFL- 193
EG+ + + + ++ + P+G A GS D T +FD+ + L
Sbjct: 215 ------------EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Query: 194 -HHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS 252
+ + + S+ +S R+L + DD + +++DA ++GH + V + +
Sbjct: 263 TYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT 321
Query: 253 PDGAAITTGSSDRTVKLWD 271
DG A+ TGS D +K+W+
Sbjct: 322 DDGMAVATGSWDSFLKIWN 340
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 66/311 (21%), Positives = 120/311 (38%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLG-----VVSVA 67
H ++A+ W T++R LL++ S D + +W D TN H + V++ A
Sbjct: 54 HLAKIYAMHW--GTDSR--LLVSASQDGKLIIW--DSYT---TNKVHAIPLRSSWVMTCA 104
Query: 68 AHPSGIIAASASLDSFVRVFDVDT---NASIAT-LEASPSEVWQMQFDPKGTTLAVAGGG 123
PSG A LD+ ++++ T N ++ L + +F V G
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSG 162
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
+ LWD T G + T + V+S++ +PD R G+ D +
Sbjct: 163 DTTCALWDIET-------------GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAK 209
Query: 184 VFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG-KSLVTAMSGH 242
++DV GH + ++ + P + + SDD ++D + L+T +
Sbjct: 210 LWDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDN 268
Query: 243 A-SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301
+ SV S G + G D +WD + H ++V + G V
Sbjct: 269 IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA 328
Query: 302 SVSDDKSISLY 312
+ S D + ++
Sbjct: 329 TGSWDSFLKIW 339
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 201 (75.8 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 54/221 (24%), Positives = 103/221 (46%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
TL ++++ M + + L V+ + +WD+ T N + + + +SS
Sbjct: 50 TLRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIPL----------RSS 98
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDV-TR---AKFLHHLEGHFMPVRSLVYSPVD 212
+V++ A++P G +ACG +D S++++ TR + L GH + + +D
Sbjct: 99 ---WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LD 153
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ ++S DT ++D E T +GH V+S+ +PD +G+ D + KLWD+
Sbjct: 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
Q+ T H + + F P G + SDD + L++
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 254
Score = 175 (66.7 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 61/259 (23%), Positives = 112/259 (43%)
Query: 21 TWVPATETRPA--LLLTGSLDETVKLW----RPDDMQLERTNTGHCLGVVSVAAHPSGII 74
+WV P+ + G LD ++ R ++++ R GH G +S
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHT-GYLSCCRFLDDNQ 156
Query: 75 AASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT 134
++S D+ ++D++T T +V + P T L V+G AS KLWD
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD-TRLFVSGACDASAKLWDVR- 214
Query: 135 WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFL- 193
EG+ + + + ++ + P+G A GS D T +FD+ + L
Sbjct: 215 ------------EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Query: 194 -HHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS 252
+ + + S+ +S R+L + DD + +++DA ++GH + V + +
Sbjct: 263 TYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT 321
Query: 253 PDGAAITTGSSDRTVKLWD 271
DG A+ TGS D +K+W+
Sbjct: 322 DDGMAVATGSWDSFLKIWN 340
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 66/311 (21%), Positives = 120/311 (38%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLG-----VVSVA 67
H ++A+ W T++R LL++ S D + +W D TN H + V++ A
Sbjct: 54 HLAKIYAMHW--GTDSR--LLVSASQDGKLIIW--DSYT---TNKVHAIPLRSSWVMTCA 104
Query: 68 AHPSGIIAASASLDSFVRVFDVDT---NASIAT-LEASPSEVWQMQFDPKGTTLAVAGGG 123
PSG A LD+ ++++ T N ++ L + +F V G
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSG 162
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
+ LWD T G + T + V+S++ +PD R G+ D +
Sbjct: 163 DTTCALWDIET-------------GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAK 209
Query: 184 VFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG-KSLVTAMSGH 242
++DV GH + ++ + P + + SDD ++D + L+T +
Sbjct: 210 LWDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDN 268
Query: 243 A-SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301
+ SV S G + G D +WD + H ++V + G V
Sbjct: 269 IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA 328
Query: 302 SVSDDKSISLY 312
+ S D + ++
Sbjct: 329 TGSWDSFLKIW 339
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 201 (75.8 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 54/221 (24%), Positives = 103/221 (46%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
TL ++++ M + + L V+ + +WD+ T N + + + +SS
Sbjct: 50 TLRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIPL----------RSS 98
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDV-TR---AKFLHHLEGHFMPVRSLVYSPVD 212
+V++ A++P G +ACG +D S++++ TR + L GH + + +D
Sbjct: 99 ---WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LD 153
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ ++S DT ++D E T +GH V+S+ +PD +G+ D + KLWD+
Sbjct: 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
Q+ T H + + F P G + SDD + L++
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 254
Score = 175 (66.7 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 61/259 (23%), Positives = 112/259 (43%)
Query: 21 TWVPATETRPA--LLLTGSLDETVKLW----RPDDMQLERTNTGHCLGVVSVAAHPSGII 74
+WV P+ + G LD ++ R ++++ R GH G +S
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHT-GYLSCCRFLDDNQ 156
Query: 75 AASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT 134
++S D+ ++D++T T +V + P T L V+G AS KLWD
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD-TRLFVSGACDASAKLWDVR- 214
Query: 135 WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFL- 193
EG+ + + + ++ + P+G A GS D T +FD+ + L
Sbjct: 215 ------------EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Query: 194 -HHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS 252
+ + + S+ +S R+L + DD + +++DA ++GH + V + +
Sbjct: 263 TYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT 321
Query: 253 PDGAAITTGSSDRTVKLWD 271
DG A+ TGS D +K+W+
Sbjct: 322 DDGMAVATGSWDSFLKIWN 340
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 66/311 (21%), Positives = 120/311 (38%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLG-----VVSVA 67
H ++A+ W T++R LL++ S D + +W D TN H + V++ A
Sbjct: 54 HLAKIYAMHW--GTDSR--LLVSASQDGKLIIW--DSYT---TNKVHAIPLRSSWVMTCA 104
Query: 68 AHPSGIIAASASLDSFVRVFDVDT---NASIAT-LEASPSEVWQMQFDPKGTTLAVAGGG 123
PSG A LD+ ++++ T N ++ L + +F V G
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSG 162
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
+ LWD T G + T + V+S++ +PD R G+ D +
Sbjct: 163 DTTCALWDIET-------------GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAK 209
Query: 184 VFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG-KSLVTAMSGH 242
++DV GH + ++ + P + + SDD ++D + L+T +
Sbjct: 210 LWDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDN 268
Query: 243 A-SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301
+ SV S G + G D +WD + H ++V + G V
Sbjct: 269 IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA 328
Query: 302 SVSDDKSISLY 312
+ S D + ++
Sbjct: 329 TGSWDSFLKIW 339
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 201 (75.8 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 54/221 (24%), Positives = 103/221 (46%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
TL ++++ M + + L V+ + +WD+ T N + + + +SS
Sbjct: 50 TLRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIPL----------RSS 98
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDV-TR---AKFLHHLEGHFMPVRSLVYSPVD 212
+V++ A++P G +ACG +D S++++ TR + L GH + + +D
Sbjct: 99 ---WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LD 153
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ ++S DT ++D E T +GH V+S+ +PD +G+ D + KLWD+
Sbjct: 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
Q+ T H + + F P G + SDD + L++
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 254
Score = 175 (66.7 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 61/259 (23%), Positives = 112/259 (43%)
Query: 21 TWVPATETRPA--LLLTGSLDETVKLW----RPDDMQLERTNTGHCLGVVSVAAHPSGII 74
+WV P+ + G LD ++ R ++++ R GH G +S
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHT-GYLSCCRFLDDNQ 156
Query: 75 AASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT 134
++S D+ ++D++T T +V + P T L V+G AS KLWD
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD-TRLFVSGACDASAKLWDVR- 214
Query: 135 WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFL- 193
EG+ + + + ++ + P+G A GS D T +FD+ + L
Sbjct: 215 ------------EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Query: 194 -HHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS 252
+ + + S+ +S R+L + DD + +++DA ++GH + V + +
Sbjct: 263 TYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT 321
Query: 253 PDGAAITTGSSDRTVKLWD 271
DG A+ TGS D +K+W+
Sbjct: 322 DDGMAVATGSWDSFLKIWN 340
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 66/311 (21%), Positives = 120/311 (38%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLG-----VVSVA 67
H ++A+ W T++R LL++ S D + +W D TN H + V++ A
Sbjct: 54 HLAKIYAMHW--GTDSR--LLVSASQDGKLIIW--DSYT---TNKVHAIPLRSSWVMTCA 104
Query: 68 AHPSGIIAASASLDSFVRVFDVDT---NASIAT-LEASPSEVWQMQFDPKGTTLAVAGGG 123
PSG A LD+ ++++ T N ++ L + +F V G
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSG 162
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
+ LWD T G + T + V+S++ +PD R G+ D +
Sbjct: 163 DTTCALWDIET-------------GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAK 209
Query: 184 VFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG-KSLVTAMSGH 242
++DV GH + ++ + P + + SDD ++D + L+T +
Sbjct: 210 LWDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDN 268
Query: 243 A-SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301
+ SV S G + G D +WD + H ++V + G V
Sbjct: 269 IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA 328
Query: 302 SVSDDKSISLY 312
+ S D + ++
Sbjct: 329 TGSWDSFLKIW 339
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 201 (75.8 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 54/221 (24%), Positives = 103/221 (46%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
TL ++++ M + + L V+ + +WD+ T N + + + +SS
Sbjct: 50 TLRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIPL----------RSS 98
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDV-TR---AKFLHHLEGHFMPVRSLVYSPVD 212
+V++ A++P G +ACG +D S++++ TR + L GH + + +D
Sbjct: 99 ---WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LD 153
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ ++S DT ++D E T +GH V+S+ +PD +G+ D + KLWD+
Sbjct: 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
Q+ T H + + F P G + SDD + L++
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 254
Score = 175 (66.7 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 61/259 (23%), Positives = 112/259 (43%)
Query: 21 TWVPATETRPA--LLLTGSLDETVKLW----RPDDMQLERTNTGHCLGVVSVAAHPSGII 74
+WV P+ + G LD ++ R ++++ R GH G +S
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHT-GYLSCCRFLDDNQ 156
Query: 75 AASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT 134
++S D+ ++D++T T +V + P T L V+G AS KLWD
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD-TRLFVSGACDASAKLWDVR- 214
Query: 135 WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFL- 193
EG+ + + + ++ + P+G A GS D T +FD+ + L
Sbjct: 215 ------------EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Query: 194 -HHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS 252
+ + + S+ +S R+L + DD + +++DA ++GH + V + +
Sbjct: 263 TYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT 321
Query: 253 PDGAAITTGSSDRTVKLWD 271
DG A+ TGS D +K+W+
Sbjct: 322 DDGMAVATGSWDSFLKIWN 340
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 66/311 (21%), Positives = 120/311 (38%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLG-----VVSVA 67
H ++A+ W T++R LL++ S D + +W D TN H + V++ A
Sbjct: 54 HLAKIYAMHW--GTDSR--LLVSASQDGKLIIW--DSYT---TNKVHAIPLRSSWVMTCA 104
Query: 68 AHPSGIIAASASLDSFVRVFDVDT---NASIAT-LEASPSEVWQMQFDPKGTTLAVAGGG 123
PSG A LD+ ++++ T N ++ L + +F V G
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSG 162
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
+ LWD T G + T + V+S++ +PD R G+ D +
Sbjct: 163 DTTCALWDIET-------------GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAK 209
Query: 184 VFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG-KSLVTAMSGH 242
++DV GH + ++ + P + + SDD ++D + L+T +
Sbjct: 210 LWDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDN 268
Query: 243 A-SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301
+ SV S G + G D +WD + H ++V + G V
Sbjct: 269 IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA 328
Query: 302 SVSDDKSISLY 312
+ S D + ++
Sbjct: 329 TGSWDSFLKIW 339
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 201 (75.8 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 54/221 (24%), Positives = 102/221 (46%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156
TL ++++ M + + L V+ + +WD+ T N + + + +SS
Sbjct: 50 TLRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIPL----------RSS 98
Query: 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDV-TR---AKFLHHLEGHFMPVRSLVYSPVD 212
+V++ A++P G +ACG +D S++ + TR + L GH + + +D
Sbjct: 99 ---WVMTCAYAPSGNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRF--LD 153
Query: 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272
+ ++S DT ++D E T +GH V+S+ +PD +G+ D + KLWD+
Sbjct: 154 DNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDI 213
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
Q+ T H + + F P G + SDD + L++
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 254
Score = 172 (65.6 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 60/259 (23%), Positives = 111/259 (42%)
Query: 21 TWVPATETRPA--LLLTGSLDETVKLW----RPDDMQLERTNTGHCLGVVSVAAHPSGII 74
+WV P+ + G LD ++ R ++++ R GH G +S
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYSLKTREGNVRVSRELAGHT-GYLSCCRFLDDNQ 156
Query: 75 AASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT 134
++S D+ ++D++T T +V + P T L V+G AS KLWD
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPD-TRLFVSGACDASAKLWDIR- 214
Query: 135 WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFL- 193
EG+ + + + ++ + P+G A GS D T +FD+ + L
Sbjct: 215 ------------EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Query: 194 -HHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS 252
+ + + S+ +S R+L + DD + +++D ++GH + V + +
Sbjct: 263 VYSHDNIICGITSVAFSK-SGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVT 321
Query: 253 PDGAAITTGSSDRTVKLWD 271
DG A+ TGS D +K+W+
Sbjct: 322 DDGMAVATGSWDSFLKIWN 340
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 65/311 (20%), Positives = 120/311 (38%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLG-----VVSVA 67
H ++A+ W T++R LL++ S D + +W D TN H + V++ A
Sbjct: 54 HLAKIYAMHW--GTDSR--LLVSASQDGKLIIW--DSYT---TNKVHAIPLRSSWVMTCA 104
Query: 68 AHPSGIIAASASLDSFVRVFDVDT---NASIAT-LEASPSEVWQMQFDPKGTTLAVAGGG 123
PSG A LD+ ++ + T N ++ L + +F V G
Sbjct: 105 YAPSGNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSG 162
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
+ LWD T G + T + V+S++ +PD R G+ D +
Sbjct: 163 DTTCALWDIET-------------GQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAK 209
Query: 184 VFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD--AEGKSLVTAMSG 241
++D+ GH + ++ + P + + SDD ++D A+ + +V +
Sbjct: 210 LWDIREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMVYSHDN 268
Query: 242 HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301
+ SV S G + G D +WD + H ++V + G V
Sbjct: 269 IICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVTDDGMAVA 328
Query: 302 SVSDDKSISLY 312
+ S D + ++
Sbjct: 329 TGSWDSFLKIW 339
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 210 (79.0 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 72/311 (23%), Positives = 140/311 (45%)
Query: 5 GLKSVE-NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHC--L 61
G K +E AHE+ V + + + + + T S+D+ VK+W +L R H +
Sbjct: 649 GEKLLEIKAHEDEVLCCAF--SADDK--FIATCSVDKKVKIWNSMTGELVRIYDEHSEQV 704
Query: 62 GVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAG 121
+ + ++ A+ S D F++++D++ T+ + V +F P LA
Sbjct: 705 NCCHFTNNSNHLLLATGSNDYFLKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCS 764
Query: 122 GGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGT 181
++KLWD + N ++++ + + + V +WS DG +I + +
Sbjct: 765 A-DGTLKLWDVKSANERKSINVKQFFLNSEEPQEDLEVIVKCCSWSADGAKIMVAAKN-K 822
Query: 182 ISVFDVTRAKFLHHLE-GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS 240
+ +FD+ + L + GH V+ +SP + + + S V ++ + V
Sbjct: 823 VFLFDIHSSGLLAEMHMGHHSAVQYCDFSPHNHLAVVALSQYC-VELWSMDSGLKVADCR 881
Query: 241 GHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRV 300
GH SWV V SPDG++ T S D+T++LW+ + S T ++ V F+ V
Sbjct: 882 GHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETK-KVCKNSATVLKQEI-DVVFQENEVTV 939
Query: 301 VSVSDDKSISL 311
++V + + + L
Sbjct: 940 LAVDNIRRLQL 950
Score = 150 (57.9 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 45/156 (28%), Positives = 73/156 (46%)
Query: 161 VLSVAWSPDGRRIA-CGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSA 219
V +S DG+RIA CG+ D T+ VF + L ++ H V +S D + + +
Sbjct: 620 VYHACFSEDGQRIASCGA-DKTLQVFKAETGEKLLEIKAHEDEVLCCAFS-ADDKFIATC 677
Query: 220 SDDTHVHMYDAEGKSLVTAMSGHASWV--LSVDASPDGAAITTGSSDRTVKLWDLNMRAA 277
S D V ++++ LV H+ V + + + TGS+D +KLWDLN
Sbjct: 678 SVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGSNDYFLKLWDLNQEEC 737
Query: 278 MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+M HT+ V F P + S S D ++ L++
Sbjct: 738 RNTMFGHTNSVSHCRFSPDDQVLASCSADGTLKLWD 773
Score = 129 (50.5 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 67/290 (23%), Positives = 116/290 (40%)
Query: 39 DETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATL 98
D+T+++++ + + H V+ A A+ S+D V++++ T +
Sbjct: 638 DKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDKFIATCSVDKKVKIWNSMTGELVRIY 697
Query: 99 EASPSEVWQMQFDPKGTTLAVA-GGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSS 157
+ +V F L +A G +KLWD T+ T+ S
Sbjct: 698 DEHSEQVNCCHFTNNSNHLLLATGSNDYFLKLWDLNQEECRNTM-------FGHTNSVSH 750
Query: 158 KKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK----------FLHHLEGHF---MPVR 204
+F SPD + +A S DGT+ ++DV A FL+ E + V+
Sbjct: 751 CRF------SPDDQVLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDLEVIVK 804
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS-GHASWVLSVDASPDGAAITTGSS 263
+S +++ +A + V ++D L+ M GH S V D SP S
Sbjct: 805 CCSWSADGAKIMVAAKNK--VFLFDIHSSGLLAEMHMGHHSAVQYCDFSPHNHLAVVALS 862
Query: 264 DRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
V+LW ++ + H V V F P G ++ SDD++I L+E
Sbjct: 863 QYCVELWSMDSGLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWE 912
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 200 (75.5 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 62/233 (26%), Positives = 113/233 (48%)
Query: 90 DTNASIATLEASP-SEVWQMQFDPKGTTLAVAGGGSASVKLW--DTATWNLIATLSIPRP 146
DT ++ + A P S W + ++P GT LA GG ++++W D W + L
Sbjct: 3 DTLTLLSRVSAHPDSRCWFLAWNPSGTLLASCGG-DRTIRIWGKDGDNWVCKSVLG---- 57
Query: 147 EGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF--LHHLEGHFMPVR 204
EG + T V V+WSP G +A S D T ++ + +F + LEGH V+
Sbjct: 58 EGHQRT--------VRKVSWSPCGNYLASASFDATTCIWMKKKEEFECITTLEGHENEVK 109
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKS---LVTAMSGHASWVLSVDASPDGAAITTG 261
S+ ++P +L + S D V +++ + + V+ ++ H V V P+ + +
Sbjct: 110 SVAWAP-SGSLLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHPNQELLASA 168
Query: 262 SSDRTVKLW--DLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
S D +VKL+ + + ++ HT VW ++F G ++ + SDDK++ ++
Sbjct: 169 SYDDSVKLYREEEDDWVCCATLEGHTSTVWSLAFDQTGEQLATCSDDKTVRIW 221
Score = 170 (64.9 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 73/270 (27%), Positives = 117/270 (43%)
Query: 66 VAAHPSGIIAASASLDSFVRVF--DVDTNASIATL-EASPSEVWQMQFDPKGTTLAVAGG 122
+A +PSG + AS D +R++ D D + L E V ++ + P G LA A
Sbjct: 22 LAWNPSGTLLASCGGDRTIRIWGKDGDNWVCKSVLGEGHQRTVRKVSWSPCGNYLASASF 81
Query: 123 GSASVKLW--DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG 180
A+ +W + I TL EG + V SVAW+P G +A S D
Sbjct: 82 -DATTCIWMKKKEEFECITTL-----EG--------HENEVKSVAWAPSGSLLATCSRDK 127
Query: 181 TISVFDVTRAK---FLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLV- 236
++ V++V + + L H V+ +V+ P + +L SAS D V +Y E V
Sbjct: 128 SVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHP-NQELLASASYDDSVKLYREEEDDWVC 186
Query: 237 -TAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW------------DLNMRAAMQSMTN 283
+ GH S V S+ G + T S D+TV++W D N +
Sbjct: 187 CATLEGHTSTVWSLAFDQTGEQLATCSDDKTVRIWRQLGTGEQGSKSDPNWKCVCTLTGY 246
Query: 284 HTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
HT V+ V++ L G + + D ++ ++E
Sbjct: 247 HTRTVYDVNWNHLTGAIATACGDDAVRIFE 276
Score = 167 (63.8 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 65/235 (27%), Positives = 100/235 (42%)
Query: 2 KFAGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQ-LERTNT--G 58
+F + ++E HE V +V W P+ +LL T S D++V +W D+ + E +
Sbjct: 94 EFECITTLEG-HENEVKSVAWAPSG----SLLATCSRDKSVWVWEVDEEEEYECVSVLNS 148
Query: 59 HCLGVVSVAAHPSGIIAASASLDSFVRVF--DVDTNASIATLEASPSEVWQMQFDPKGTT 116
H V V HP+ + ASAS D V+++ + D ATLE S VW + FD G
Sbjct: 149 HTQDVKHVVWHPNQELLASASYDDSVKLYREEEDDWVCCATLEGHTSTVWSLAFDQTGEQ 208
Query: 117 LAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACG 176
LA +V++W + S P + + T + V V W+ IA
Sbjct: 209 LATCSDDK-TVRIWRQLGTGEQGSKSDPNWKCVC-TLTGYHTRTVYDVNWNHLTGAIATA 266
Query: 177 SMDGTISVF------DVTRAKF---LHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
D + +F D + F H H V + + P +P +L S SDD
Sbjct: 267 CGDDAVRIFEEDPGSDPLQPTFSLTAHMPRAHTQDVNCVTWHPKEPNLLASCSDD 321
Score = 138 (53.6 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 71/286 (24%), Positives = 117/286 (40%)
Query: 6 LKSVENAHEES-VWAVTWVPATETRPALLLTGSLDETVKLWRPD-DMQLERT--NTGHCL 61
L S +AH +S W + W P+ LL + D T+++W D D + ++ GH
Sbjct: 7 LLSRVSAHPDSRCWFLAWNPSG----TLLASCGGDRTIRIWGKDGDNWVCKSVLGEGHQR 62
Query: 62 GVVSVAAHPSGIIAASASLDSFVRVF--DVDTNASIATLEASPSEVWQMQFDPKGTTLAV 119
V V+ P G ASAS D+ ++ + I TLE +EV + + P G+ LA
Sbjct: 63 TVRKVSWSPCGNYLASASFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAPSGSLLAT 122
Query: 120 AGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMD 179
SV +W+ +S+ +S + V V W P+ +A S D
Sbjct: 123 CSRDK-SVWVWEVDEEEEYECVSV----------LNSHTQDVKHVVWHPNQELLASASYD 171
Query: 180 GTISVFDVTRAKFL--HHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY--------- 228
++ ++ ++ LEGH V SL + + L + SDD V ++
Sbjct: 172 DSVKLYREEEDDWVCCATLEGHTSTVWSLAFDQTGEQ-LATCSDDKTVRIWRQLGTGEQG 230
Query: 229 ---DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271
D K + T H V V+ + AI T D V++++
Sbjct: 231 SKSDPNWKCVCTLTGYHTRTVYDVNWNHLTGAIATACGDDAVRIFE 276
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 141 (54.7 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 42/155 (27%), Positives = 75/155 (48%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
D + I S D TI V+ + +F+ L GH + L Y R++ S S D + ++
Sbjct: 342 DEKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD---RLVVSGSSDNSIRLW 398
Query: 229 DAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL----NMRAA-----MQ 279
D E + + + GH V + D I +G+ D +K+WDL + RAA +
Sbjct: 399 DIECGACLRVLEGHEELVRCIRF--DTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLN 456
Query: 280 SMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314
++ HT +V+ + F ++VS S D +I ++++
Sbjct: 457 TLVEHTGRVFRLQFDEF--QIVSSSHDDTILIWDF 489
Score = 138 (53.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 60/255 (23%), Positives = 114/255 (44%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91
++++GS D TV++W + ++ T HC V+ + + +G++ + S D + V+D+ +
Sbjct: 262 VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFN-NGMMV-TCSKDRSIAVWDMTS 319
Query: 92 NASIA---TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEG 148
+ I L + V + FD K V+ G ++K+W T+T + TL+
Sbjct: 320 PSEITLRRVLVGHRAAVNVVDFDEK---YIVSASGDRTIKVWSTSTCEFVRTLN------ 370
Query: 149 LKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVY 208
K+ + + + R + GS D +I ++D+ L LEGH VR + +
Sbjct: 371 -------GHKRGIACLQYRD--RLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRF 421
Query: 209 SPVDPRVLFSASDDTHVHMYD--------AEGKSL-VTAMSGHASWVLSVDASPDGAAIT 259
D + + S + D + ++D A +L + + H V + D I
Sbjct: 422 ---DTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLVEHTGRVFRLQF--DEFQIV 476
Query: 260 TGSSDRTVKLWD-LN 273
+ S D T+ +WD LN
Sbjct: 477 SSSHDDTILIWDFLN 491
Score = 135 (52.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 46/165 (27%), Positives = 79/165 (47%)
Query: 154 KSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDP 213
+S + K V + + DG+ I G D TI ++D T + + L GH V L Y D
Sbjct: 206 RSENSKGVYCLQYD-DGK-IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQY---DD 260
Query: 214 RVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLN 273
+V+ S S D+ V ++D +V + H VL + + +G +T S DR++ +WD+
Sbjct: 261 KVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFN-NGMMVTC-SKDRSIAVWDMT 318
Query: 274 MRAAM---QSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
+ + + + H V V F +VS S D++I ++ S
Sbjct: 319 SPSEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWSTS 361
Score = 119 (46.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 36/148 (24%), Positives = 70/148 (47%)
Query: 169 DGRRIACGSMDGTISVFDVTRAKFL---HHLEGHFMPVRSLVYSPVDPRVLFSASDDTHV 225
+G + C S D +I+V+D+T + L GH V + + D + + SAS D +
Sbjct: 300 NGMMVTC-SKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTI 355
Query: 226 HMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHT 285
++ V ++GH + + + +GSSD +++LWD+ A ++ + H
Sbjct: 356 KVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNSIRLWDIECGACLRVLEGHE 413
Query: 286 DQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ V + F R+VS + D I +++
Sbjct: 414 ELVRCIRFDTK--RIVSGAYDGKIKVWD 439
Score = 112 (44.5 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 31/99 (31%), Positives = 51/99 (51%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+++G D T+K+W D+Q +T GH V+ + II+ S+ DS VRV+DV+T
Sbjct: 223 IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDKVIISGSS--DSTVRVWDVNTG 280
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWD 131
+ TL V ++F+ G + V S+ +WD
Sbjct: 281 EMVNTLIHHCEAVLHLRFN-NG--MMVTCSKDRSIAVWD 316
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 203 (76.5 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 76/261 (29%), Positives = 118/261 (45%)
Query: 77 SASLDSFVRVFD--VDTNA--SIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132
SAS+D + +++ V+ N ++ V + D GT +G +K+W T
Sbjct: 160 SASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTGTRFC-SGSWDKMLKIWST 218
Query: 133 ATWNLIATL--SIPRPEGLKPTDK-----------SSSKKFVLSVAWSPDGRRIACGSMD 179
+ + S RP + T++ S K+ + SV WS D I S D
Sbjct: 219 VPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLWS-DAEEICSASWD 277
Query: 180 GTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGK--SLVT 237
TI V+DV L G+ + + YSP+ R L S S D H+ ++D K SLV+
Sbjct: 278 HTIGVWDVESGSLKSTLTGNKV-FNCISYSPLCKR-LASGSTDRHIRLWDPRTKDGSLVS 335
Query: 238 -AMSGHASWVLSVDASPDGAA-ITTGSSDRTVKLWDL-NMRAAMQSMTNHTDQVWGVSFR 294
+++ H WV SV SP + +GS D VKLWD + +A + + H D+V V +
Sbjct: 336 LSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT 395
Query: 295 PLGGRVVSVSDDKSISLYEYS 315
G + +D+K S Y YS
Sbjct: 396 NTGLLLSGGADNKLYS-YRYS 415
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 191 (72.3 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 59/233 (25%), Positives = 106/233 (45%)
Query: 46 RPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEV 105
RP + + +T GH V+ V+ P G AS S D+ VR++D+ T + T + + V
Sbjct: 96 RPVN-RCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWV 154
Query: 106 WQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVA 165
+ + P G L V+G S + WN P+ L+ + + KK++ ++
Sbjct: 155 LTVAWSPDGKHL-VSGSKSGEI-----CCWN-------PKKGELEGSPLTGHKKWITGIS 201
Query: 166 WSP-----DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSAS 220
W P RR S DG ++D+T K + L GH + V + + ++++ S
Sbjct: 202 WEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWG--GDGIIYTGS 259
Query: 221 DDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLN 273
D + M++ L+ + GH W+ S+ S + + TG+ D T + + N
Sbjct: 260 QDCTIKMWETTQGKLIRELKGHGHWINSLALSTE-YVLRTGAFDHTGRQYPPN 311
Score = 187 (70.9 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 59/205 (28%), Positives = 89/205 (43%)
Query: 86 VFDV-DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIP 144
VF + N T+ V + F P G LA +G G +V+LWD T + T
Sbjct: 92 VFRIRPVNRCSQTIAGHAEAVLCVSFSPDGKQLA-SGSGDTTVRLWDLYTETPLFTCK-- 148
Query: 145 RPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHH-LEGHFMPV 203
K +VL+VAWSPDG+ + GS G I ++ + + L GH +
Sbjct: 149 -----------GHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWI 197
Query: 204 RSLVYSPV---DP-RVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAIT 259
+ + PV P R ++S D ++D K + +SGH V V DG I
Sbjct: 198 TGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGI-IY 256
Query: 260 TGSSDRTVKLWDLNMRAAMQSMTNH 284
TGS D T+K+W+ ++ + H
Sbjct: 257 TGSQDCTIKMWETTQGKLIRELKGH 281
Score = 186 (70.5 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 44/133 (33%), Positives = 71/133 (53%)
Query: 140 TLSIPRPEGLKPTDK--SSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLE 197
T+ + P K K + ++ V V +SPDG+ IA S D ++ +++ +F+
Sbjct: 340 TMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFR 399
Query: 198 GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAA 257
GH PV + +S D R+L S S D+ + +++ K L + GHA V +VD SPDG
Sbjct: 400 GHVGPVYQVSWS-ADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEK 458
Query: 258 ITTGSSDRTVKLW 270
+ +G DR +KLW
Sbjct: 459 VVSGGKDRVLKLW 471
Score = 185 (70.2 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 46/148 (31%), Positives = 77/148 (52%)
Query: 167 SPDGRRIACGSMDGTISVFDVTRAKF-LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHV 225
SP+ R+ GS D T+ +++ + +K L GH V + +SP D + + SAS D V
Sbjct: 328 SPE--RLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSP-DGKWIASASFDKSV 384
Query: 226 HMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHT 285
+++ VT GH V V S D + +GS D T+K+W++ + Q + H
Sbjct: 385 RLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHA 444
Query: 286 DQVWGVSFRPLGGRVVSVSDDKSISLYE 313
D+V+ V + P G +VVS D+ + L++
Sbjct: 445 DEVFAVDWSPDGEKVVSGGKDRVLKLWK 472
Score = 154 (59.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 42/159 (26%), Positives = 82/159 (51%)
Query: 161 VLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSAS 220
VL V++SPDG+++A GS D T+ ++D+ L +GH V ++ +SP D + L S S
Sbjct: 112 VLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSP-DGKHLVSGS 170
Query: 221 DDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAA-----ITTGSSDRTVKLWDLNM 274
+ ++ + G+ + ++GH W+ + P + T S D ++WD+ +
Sbjct: 171 KSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITL 230
Query: 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ ++ ++ HT V V + G + + S D +I ++E
Sbjct: 231 KKSIICLSGHTLAVTCVKWGG-DGIIYTGSQDCTIKMWE 268
Score = 143 (55.4 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 45/177 (25%), Positives = 82/177 (46%)
Query: 144 PRPEGLKPTDKSSSKKFVLSVAWSP-----DGRRIACGSMDGTISVFDVTRAKFLHHLEG 198
P+ L+ + + KK++ ++W P RR S DG ++D+T K + L G
Sbjct: 180 PKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSG 239
Query: 199 HFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAI 258
H + V + + ++++ S D + M++ L+ + GH W+ S+ S + +
Sbjct: 240 HTLAVTCVKWG--GDGIIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTE-YVL 296
Query: 259 TTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
TG+ D T + + N Q ++ G S P R+VS SDD ++ L+E S
Sbjct: 297 RTGAFDHTGRQYPPNEEK--QKALERYNKTKGDS--P--ERLVSGSDDFTMFLWEPS 347
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 46/157 (29%), Positives = 73/157 (46%)
Query: 30 PALLLTGSLDETVKLWRPD-DMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFD 88
P L++GS D T+ LW P Q ++ TGH V V P G ASAS D VR+++
Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN 388
Query: 89 VDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEG 148
T + V+Q+ + + L ++G +++K+W+ T L L P G
Sbjct: 389 GITGQFVTVFRGHVGPVYQVSWSAD-SRLLLSGSKDSTLKIWEIRTKKLKQDL----P-G 442
Query: 149 LKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185
D+ V +V WSPDG ++ G D + ++
Sbjct: 443 --HADE------VFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 124 (48.7 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 239 MSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGG 298
++GHA VL V SPDG + +GS D TV+LWDL + + H + V V++ P G
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGK 164
Query: 299 RVVSVSDDKSI 309
+VS S I
Sbjct: 165 HLVSGSKSGEI 175
Score = 58 (25.5 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASA 78
++ TGS D T+K+W +L R GH + S+A ++ A
Sbjct: 254 IIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTEYVLRTGA 300
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 199 (75.1 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 64/231 (27%), Positives = 110/231 (47%)
Query: 98 LEASP-SEVWQMQFDPKGTTLAVAGGGSASVKLW--DTATWNLIATLSIPRPEGLKPTDK 154
+ A P S W + ++P GTTLA GG A +++W + +W LS +G + T
Sbjct: 11 VSAHPDSRCWYVAWNPAGTTLATCGGDRA-IRIWGKEGDSWECKCVLS----DGHQRT-- 63
Query: 155 SSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF--LHHLEGHFMPVRSLVYSPVD 212
V VAWSP G+ +A S D T ++ T F L LEGH V+ + ++P
Sbjct: 64 ------VRKVAWSPCGKYLASASFDATTCIWKKTDEDFECLTVLEGHENEVKCVAWAP-S 116
Query: 213 PRVLFSASDDTHVHMYDAEGKS---LVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKL 269
+L + S D V +++ + + ++ ++ H V V P + + S D + +
Sbjct: 117 GSLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQELLASASYDNKICI 176
Query: 270 W-----DLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315
+ D RA ++ H VW ++F P G R+ S SDD+++ +++ S
Sbjct: 177 YKEEDDDWECRATLEG---HESTVWSLTFDPEGRRLASCSDDRTVKIWKES 224
Score = 163 (62.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 68/231 (29%), Positives = 101/231 (43%)
Query: 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQ----LERTNTGHCLGV 63
+V HE V V W P+ +LL T S D++V +W D+ L N+ H V
Sbjct: 99 TVLEGHENEVKCVAWAPSG----SLLATCSRDKSVWIWEVDEEDEYECLSVVNS-HTQDV 153
Query: 64 VSVAAHPSGIIAASASLDSFVRVF-DVDTNASI-ATLEASPSEVWQMQFDPKGTTLAVAG 121
V HP+ + ASAS D+ + ++ + D + ATLE S VW + FDP+G LA
Sbjct: 154 KHVVWHPTQELLASASYDNKICIYKEEDDDWECRATLEGHESTVWSLTFDPEGRRLASCS 213
Query: 122 GGSASVKLWDTAT---------WNLIATLSIPRPEGLKPTDKSSSKKF-VLSVAWSPDGR 171
+VK+W +T W I TLS G D + + L+ A DG
Sbjct: 214 D-DRTVKIWKESTTGDGSSDESWKCICTLS--GFHGRTIYDIAWCRLTGALATACGDDGV 270
Query: 172 RIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222
R+ S D T A H + H V + ++P + +L + SD+
Sbjct: 271 RVF--SEDPTADPEQPIFALSAHVPKAHNQDVNCVSWNPKEAGLLATCSDN 319
Score = 150 (57.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 85/333 (25%), Positives = 136/333 (40%)
Query: 11 NAHEES-VWAVTWVPATETRPALLLTGSLDETVKLW--RPDDMQLERT-NTGHCLGVVSV 66
+AH +S W V W PA T L T D +++W D + + + GH V V
Sbjct: 12 SAHPDSRCWYVAWNPAGTT----LATCGGDRAIRIWGKEGDSWECKCVLSDGHQRTVRKV 67
Query: 67 AAHPSGIIAASASLDSFVRVFD-VDTNASIAT-LEASPSEVWQMQFDPKGTTLAVAGGGS 124
A P G ASAS D+ ++ D + T LE +EV + + P G+ LA
Sbjct: 68 AWSPCGKYLASASFDATTCIWKKTDEDFECLTVLEGHENEVKCVAWAPSGSLLATCSRDK 127
Query: 125 ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISV 184
SV +W+ + LS+ +S + V V W P +A S D I +
Sbjct: 128 -SVWIWEVDEEDEYECLSVV----------NSHTQDVKHVVWHPTQELLASASYDNKICI 176
Query: 185 FDVTRAKFLHH--LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD----AEGKS---- 234
+ + LEGH V SL + P + R L S SDD V ++ +G S
Sbjct: 177 YKEEDDDWECRATLEGHESTVWSLTFDP-EGRRLASCSDDRTVKIWKESTTGDGSSDESW 235
Query: 235 -LVTAMSG-HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRA-------AMQSMTN-- 283
+ +SG H + + A+ T D V+++ + A A+ +
Sbjct: 236 KCICTLSGFHGRTIYDIAWCRLTGALATACGDDGVRVFSEDPTADPEQPIFALSAHVPKA 295
Query: 284 HTDQVWGVSFRPL-GGRVVSVSDDKSISLYEYS 315
H V VS+ P G + + SD+ ++++Y+
Sbjct: 296 HNQDVNCVSWNPKEAGLLATCSDNGEFAIWKYN 328
Score = 119 (46.9 bits), Expect = 0.00014, P = 0.00014
Identities = 48/183 (26%), Positives = 78/183 (42%)
Query: 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNT--GHCLGVVSV 66
+ + H+ +V V W P + L + S D T +W+ D E GH V V
Sbjct: 56 LSDGHQRTVRKVAWSPCGK----YLASASFDATTCIWKKTDEDFECLTVLEGHENEVKCV 111
Query: 67 AAHPSGIIAASASLDSFVRVFDVDTNAS---IATLEASPSEVWQMQFDPKGTTLAVAG-G 122
A PSG + A+ S D V +++VD ++ + + +V + + P LA A
Sbjct: 112 AWAPSGSLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQELLASASYD 171
Query: 123 GSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTI 182
+ + W ATL EG + T V S+ + P+GRR+A S D T+
Sbjct: 172 NKICIYKEEDDDWECRATL-----EGHEST--------VWSLTFDPEGRRLASCSDDRTV 218
Query: 183 SVF 185
++
Sbjct: 219 KIW 221
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 204 (76.9 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 59/200 (29%), Positives = 95/200 (47%)
Query: 96 ATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKS 155
A++ + F P ++ V+G G ++ ++WD T + TL
Sbjct: 142 ASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLK------------- 188
Query: 156 SSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHH-LEGHFMPVRSLVYSPVD-- 212
+VL+V++SP+G IA GSMD T+ ++D + + L L+GH + SL + P
Sbjct: 189 GHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQ 248
Query: 213 ----PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVK 268
PR L SAS D+ V ++D K +SGH V V G I T S DRT+K
Sbjct: 249 QSGHPR-LASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGK-IYTSSHDRTIK 306
Query: 269 LWDLNMRAAMQSMTNHTDQV 288
+W+ +Q+++ H +V
Sbjct: 307 VWNSQTGTLIQTLSAHAHRV 326
Score = 197 (74.4 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 84/302 (27%), Positives = 129/302 (42%)
Query: 21 TWVPATETRP--ALLLTGSLDETVKLWRPDDMQ-LERTNTGHCLGVVSVAAHP-----SG 72
+WV A P A++ TGS+D TV++W Q L GH + S+A P SG
Sbjct: 192 SWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSG 251
Query: 73 IIA-ASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWD 131
ASAS DS VR++DV + + L V +++ GT ++K+W+
Sbjct: 252 HPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWG--GTGKIYTSSHDRTIKVWN 309
Query: 132 TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK 191
+ T LI TLS + + S F+L A+ ++ D V AK
Sbjct: 310 SQTGTLIQTLSA---HAHRVNHLALSTDFILRTAYHDHTGKVPESDAD------KVAMAK 360
Query: 192 FLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSL-VTAMSGHASWVLSVD 250
F ++ V+ L SASDD ++++D E S V + GH V V
Sbjct: 361 ------KRFEKAATINNKIVEK--LVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVT 412
Query: 251 ASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSIS 310
SPD A I + D VKLW+ + ++ H V+ F +VS S D ++
Sbjct: 413 FSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLK 472
Query: 311 LY 312
++
Sbjct: 473 VW 474
Score = 178 (67.7 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 62/239 (25%), Positives = 105/239 (43%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+ T S D T+K+W + TG + +S AH +A S D +R D
Sbjct: 296 IYTSSHDRTIKVWN--------SQTGTLIQTLSAHAHRVNHLALST--DFILRTAYHDHT 345
Query: 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPT 152
+ +A + + +F+ K T+ + V+ +A+ + L P KP
Sbjct: 346 GKVPESDADKVAMAKKRFE-KAATI-----NNKIVEKLVSASDDFTMYLWDPESSS-KPV 398
Query: 153 DKS-SSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211
+ +K V V +SPD IA D + +++ KF+ L GH V +S
Sbjct: 399 ARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFS-A 457
Query: 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
D R+L S+S DT + +++ L + GH V +VD SPDG + +G D+ +++W
Sbjct: 458 DSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIW 516
Score = 173 (66.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 37/125 (29%), Positives = 66/125 (52%)
Query: 196 LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDG 255
+ GH + + +SPV + S S D+ ++D + + + + GH SWVL+V SP+G
Sbjct: 144 IAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNG 203
Query: 256 AAITTGSSDRTVKLWDLNMRAAMQS-MTNHTDQVWGVSFRPL----GG--RVVSVSDDKS 308
A I TGS D TV++WD A+ + + H + +++ P G R+ S S D +
Sbjct: 204 AMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDST 263
Query: 309 ISLYE 313
+ +++
Sbjct: 264 VRIWD 268
Score = 165 (63.1 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 39/142 (27%), Positives = 70/142 (49%)
Query: 172 RIACGSMDGTISVFDV-TRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA 230
++ S D T+ ++D + +K + L GH V + +SP D + SA D HV +++
Sbjct: 376 KLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSP-DMAYIASAGFDNHVKLWNG 434
Query: 231 EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWG 290
+T + GH V S D + + S D T+K+W++ + + H D+V+
Sbjct: 435 RDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFA 494
Query: 291 VSFRPLGGRVVSVSDDKSISLY 312
V + P G +V S DK+I ++
Sbjct: 495 VDWSPDGQKVGSGGKDKAIRIW 516
Score = 160 (61.4 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 44/160 (27%), Positives = 81/160 (50%)
Query: 161 VLSVAWSP-DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSA 219
+L+ ++SP + GS D T ++D LH L+GH V ++ YSP + +
Sbjct: 151 ILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAMIATGS 210
Query: 220 SDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASP-----DG-AAITTGSSDRTVKLWDL 272
D+T V ++DA+ G++L + GH W+ S+ P G + + S D TV++WD+
Sbjct: 211 MDNT-VRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDV 269
Query: 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+ A ++ H V V + G ++ + S D++I ++
Sbjct: 270 ISKRADIVLSGHKGSVTCVRWGGTG-KIYTSSHDRTIKVW 308
>UNIPROTKB|F1MTQ0 [details] [associations]
symbol:BRWD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 OMA:NDNGERS
GeneTree:ENSGT00700000104382 EMBL:DAAA02003179 IPI:IPI00685238
Ensembl:ENSBTAT00000018087 Uniprot:F1MTQ0
Length = 2322
Score = 211 (79.3 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 76/302 (25%), Positives = 137/302 (45%)
Query: 33 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
+ TGS D VK+W + +L T GH + +A + + A+ S D +RV+ + T
Sbjct: 201 IFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMIAAGSCDKIIRVWCLRTC 260
Query: 93 ASIATLEASPSEVWQMQFDP--KGTT-LAVAGGGSASVKLWDTATWNLIATLSIPRPEGL 149
A +A L+ + +QF P KG+ V+ G +V W W+L + PRP L
Sbjct: 261 APVAVLQGHTGSITSLQFSPMAKGSQRYMVSTGADGTVCFWQ---WDLESLKFSPRP--L 315
Query: 150 KPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV--TRAKFLHHLEGHFMPVRSLV 207
K T+K +L ++S G +A GS D I ++ + + + LE H V S+
Sbjct: 316 KFTEKPRPGVQMLCSSFSVGGMFLATGSTDHVIRMYFLGFEAPEKIAELESHTDKVDSIQ 375
Query: 208 YSPVDPRVLFSASDDT-HVHMYDA-EGKSLVTAMSGHASWVLSVDAS----P-------- 253
+ R L + D T + ++ E +S++ M+ S LS++ P
Sbjct: 376 FCNNGDRFLSGSRDGTARIWRFEQLEWRSILLDMATRISGDLSLEEERFMKPKVTMIAWN 435
Query: 254 -DGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV-SVSDDKSISL 311
+ + + T +D +K+W+ + ++ H D+V+ + P R++ S D SI +
Sbjct: 436 QNDSIVVTAVNDHVLKVWNSYTGQLLHNLLGHADEVFVLETHPFDSRIMLSAGHDGSIFI 495
Query: 312 YE 313
++
Sbjct: 496 WD 497
Score = 137 (53.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 54/235 (22%), Positives = 99/235 (42%)
Query: 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLE------RTNTGHCL 61
+V H S+ ++ + P + +++ D TV W+ D L+ +
Sbjct: 264 AVLQGHTGSITSLQFSPMAKGSQRYMVSTGADGTVCFWQWDLESLKFSPRPLKFTEKPRP 323
Query: 62 GVVSVAAHPS--GIIAASASLDSFVRVFDVDTNA--SIATLEASPSEVWQMQFDPKGTTL 117
GV + + S G+ A+ S D +R++ + A IA LE+ +V +QF G
Sbjct: 324 GVQMLCSSFSVGGMFLATGSTDHVIRMYFLGFEAPEKIAELESHTDKVDSIQFCNNGDRF 383
Query: 118 AVAGGGSASVKLW--DTATWNLIATLSIPRPEG-LKPTDKSSSKKFVLSVAWSPDGRRIA 174
++G + ++W + W I R G L ++ K V +AW+ + +
Sbjct: 384 -LSGSRDGTARIWRFEQLEWRSILLDMATRISGDLSLEEERFMKPKVTMIAWNQNDSIVV 442
Query: 175 CGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
D + V++ + LH+L GH V L P D R++ SA D + ++D
Sbjct: 443 TAVNDHVLKVWNSYTGQLLHNLLGHADEVFVLETHPFDSRIMLSAGHDGSIFIWD 497
Score = 122 (48.0 bits), Expect = 0.00084, P = 0.00084
Identities = 28/128 (21%), Positives = 60/128 (46%)
Query: 191 KFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVD 250
K + GH V + + R+ F+ SDD V ++ L++ + GH++ + +
Sbjct: 177 KMHRRILGHLSAVYCVAFDRTGHRI-FTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMA 235
Query: 251 ASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPL--GGR--VVSVSDD 306
+ + I GS D+ +++W L A + + HT + + F P+ G + +VS D
Sbjct: 236 VNYENTMIAAGSCDKIIRVWCLRTCAPVAVLQGHTGSITSLQFSPMAKGSQRYMVSTGAD 295
Query: 307 KSISLYEY 314
++ +++
Sbjct: 296 GTVCFWQW 303
>FB|FBgn0038597 [details] [associations]
symbol:CG8064 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0022008
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD EMBL:AY047497
RefSeq:NP_650705.1 UniGene:Dm.4684 SMR:Q9VE98 MINT:MINT-1586038
STRING:Q9VE98 EnsemblMetazoa:FBtr0083574 GeneID:42196
KEGG:dme:Dmel_CG8064 UCSC:CG8064-RA FlyBase:FBgn0038597
InParanoid:Q9VE98 OrthoDB:EOG4KWH7Q ChiTaRS:CG8064 GenomeRNAi:42196
NextBio:827621 Uniprot:Q9VE98
Length = 922
Score = 207 (77.9 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 76/289 (26%), Positives = 127/289 (43%)
Query: 31 ALLLTGSLDETVKLWRPDDMQLERT-NTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDV 89
+L + E+ K W D MQ RT T + L V ++ + + + DV
Sbjct: 415 SLAIGSGAGESFKFWDRDAMQCLRTVPTDYILCSKFVPGDRYVLLGMKSGK---LLIVDV 471
Query: 90 DTNASIATLEASPSEVWQMQF--DPKGTTLAVAGGGSASVKLWDTATWNLI-ATLSIPRP 146
+ + A E+W + D KG V G G +VK+W T+ LI A +
Sbjct: 472 AAADIVEEIPAHEGELWSIAILPDQKG---CVTGSGDTTVKIW---TFELIDAGEGAAQT 525
Query: 147 EGLKPTDKSSSK--KFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVR 204
+ L K++ K + VL +A SPD + +A G +D T+ VF + KF L GH +PV
Sbjct: 526 KVLSLLHKNTLKLEETVLCLAVSPDMKYLAVGLLDATVKVFFLDTFKFYLSLYGHKLPVI 585
Query: 205 SLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD 264
L S D ++ + S D +V ++ ++ H V+SV P T D
Sbjct: 586 CLDIS-YDSNLIVTGSADRNVKVWGLNFGDCHRSIFAHDDSVMSVQFIPRTHMFFTCGKD 644
Query: 265 RTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
VK WD + + ++ H + + +S P G +V+ D+++ ++E
Sbjct: 645 GKVKQWDGDNFEKILTLPGHIGEAYCLSVSPNGRYLVTCGSDRTLRMFE 693
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 73/276 (26%), Positives = 118/276 (42%)
Query: 37 SLDETVKLWRPDD--MQLER--TNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92
SL+ ++K + D +L R T GH V SV + S + +SF + +D D
Sbjct: 376 SLEASIKTRKATDPSAKLLRSLTRLGHQSEVRSVCFSNDSLAIGSGAGESF-KFWDRDAM 434
Query: 93 ASIATLEASPSE-VWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP 151
+ T+ P++ + +F P G + G S + + D A +++ IP EG
Sbjct: 435 QCLRTV---PTDYILCSKFVP-GDRYVLLGMKSGKLLIVDVAAADIVE--EIPAHEGE-- 486
Query: 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISV--FDVTRA-------KFLHHLEGHFMP 202
+ S+A PD + GS D T+ + F++ A K L L + +
Sbjct: 487 ---------LWSIAILPDQKGCVTGSGDTTVKIWTFELIDAGEGAAQTKVLSLLHKNTLK 537
Query: 203 VRSLVYS-PVDPRVLFSASD--DTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAIT 259
+ V V P + + A D V ++ + ++ GH V+ +D S D I
Sbjct: 538 LEETVLCLAVSPDMKYLAVGLLDATVKVFFLDTFKFYLSLYGHKLPVICLDISYDSNLIV 597
Query: 260 TGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRP 295
TGS+DR VK+W LN +S+ H D V V F P
Sbjct: 598 TGSADRNVKVWGLNFGDCHRSIFAHDDSVMSVQFIP 633
Score = 127 (49.8 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 40/162 (24%), Positives = 79/162 (48%)
Query: 158 KKF-VLSVAWSPDGRRIACGSMDGTISVFDVTRAKF---LHHLEGHFMPVRSLVYSPVDP 213
+KF V S+ SPD IA G DG + +FD++ ++ + L H V L Y
Sbjct: 64 EKFEVTSLRVSPDHLHIAVGYADGMVQIFDLSSDRYYDPICTLALHKNAVSILRYDLQGM 123
Query: 214 RVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS---VDASPDGAAITTGSSDRTVKLW 270
R L S DT + + D ++ +SGH + + + D + + + S D +K W
Sbjct: 124 R-LVSGGLDTELVVVDVVEQAGRARLSGHNAAITDAHFLQRLVDESIVVSCSKDTQIKFW 182
Query: 271 DLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+L + +++ ++ +VW ++F +G +V+ + + +++Y
Sbjct: 183 NLETQFCFKTIVDNRTEVWALAF--IGNLMVAGAGESGMNVY 222
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 204 (76.9 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 81/332 (24%), Positives = 143/332 (43%)
Query: 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTG-------HC 60
+V HE V+ W P ++ LL +GS D T ++W + E +N G HC
Sbjct: 226 TVLRGHESEVFICAWNPVSD----LLASGSGDSTARIWNLN----ENSNGGSTQLVLRHC 277
Query: 61 L--G---------VVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQ 109
+ G V S+ + +G + A+ S D F R++ D N + +TL ++ ++
Sbjct: 278 IREGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLA-STLGQHKGPIFALK 336
Query: 110 FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169
++ KG + AG ++ +WD T A P P L V W +
Sbjct: 337 WNRKGNYILSAGVDKTTI-IWDAHTGE--AKQQFPFHSA--PA---------LDVDWQNN 382
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
+C S D I V + + + +GH V ++ + P +L S SDD + ++
Sbjct: 383 TTFASC-STDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWS 440
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAA---------ITTGSSDRTVKLWDLNMRAAMQS 280
+ + + + H + ++ SP G A + + S D TV+LWD+ +
Sbjct: 441 MKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHT 500
Query: 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+T H + V+ V+F P G + S S DK + ++
Sbjct: 501 LTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 532
Score = 176 (67.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 70/294 (23%), Positives = 124/294 (42%)
Query: 28 TRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVF 87
T LL TGS D ++W +D L T H + ++ + G SA +D ++
Sbjct: 298 TNGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIW 356
Query: 88 DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE 147
D T + + + + TT A S S D + L RP
Sbjct: 357 DAHTGEAKQQFPFHSAPALDVDWQ-NNTTFA-----SCST---DMCIH--VCRLGCDRP- 404
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLV 207
+K +++ V ++ W P G +A S D T+ ++ + + +H L+ H + ++
Sbjct: 405 -VKTFQGHTNE--VNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIK 461
Query: 208 YSPVDPR--------VLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAIT 259
+SP P +L SAS D+ V ++D E ++ H V SV SPDG +
Sbjct: 462 WSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLA 521
Query: 260 TGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+GS D+ V +W+ + S T ++ V + G +V + + D S+ + +
Sbjct: 522 SGSFDKCVHIWNTQSGNLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLD 574
Score = 135 (52.6 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 48/186 (25%), Positives = 79/186 (42%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H V A+ W P+ LL + S D T+K+W H + ++ P+G
Sbjct: 411 HTNEVNAIKWDPSG----MLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTG 466
Query: 73 ---------IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGG 123
I+ ASAS DS VR++D++ TL V+ + F P G LA +G
Sbjct: 467 PATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLA-SGSF 525
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
V +W+T + NL+ + R G + V W+ G ++ + DG++
Sbjct: 526 DKCVHIWNTQSGNLVHSY---RGTG-----------GIFEVCWNARGDKVGASASDGSVC 571
Query: 184 VFDVTR 189
V D+ +
Sbjct: 572 VLDLRK 577
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 203 (76.5 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 47/154 (30%), Positives = 77/154 (50%)
Query: 160 FVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSA 219
+V +A P + GS D TI ++D+ K L GH VR ++ S P LFS
Sbjct: 208 WVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSP-YLFSC 266
Query: 220 SDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQ 279
+D V +D E ++ GH S V +D P + T S D T ++WD+ +A++
Sbjct: 267 GEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVH 326
Query: 280 SMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+++ HT+ V V + +VV+ S D +I L++
Sbjct: 327 TLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWD 360
Score = 182 (69.1 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 58/194 (29%), Positives = 85/194 (43%)
Query: 114 GTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI 173
G V G ++K+WD A+ L LS+ T S+ + V+ A SP
Sbjct: 217 GNQWFVTGSADRTIKIWDLASGKL--KLSL--------TGHISTVRGVIVSARSP--YLF 264
Query: 174 ACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP-VDPRVLFSASDDTHVHMYDAEG 232
+CG D + +D+ K + H GH V L P +D VL + S D+ ++D
Sbjct: 265 SCGE-DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTID--VLVTCSRDSTARIWDVRT 321
Query: 233 KSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVS 292
K+ V +SGH + V +V + TGS D T++LWDL ++TNH V V
Sbjct: 322 KASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVI 381
Query: 293 FRPLGGRVVSVSDD 306
P S S D
Sbjct: 382 LHPRHYTFASGSPD 395
Score = 129 (50.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 59/241 (24%), Positives = 101/241 (41%)
Query: 45 WRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSE 104
W P +L R +GH V +A P + S D ++++D+ + +L S
Sbjct: 192 WHPP-WKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHIST 250
Query: 105 VWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSV 164
V + + L + G VK WD +N + I G S + L +
Sbjct: 251 VRGVIVSARSPYL-FSCGEDKQVKCWDLE-YNKV----IRHYHG------HLSAVYGLDL 298
Query: 165 AWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTH 224
+ D + C S D T ++DV +H L GH V ++ +P+V+ + S DT
Sbjct: 299 HPTIDVL-VTC-SRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVV-TGSHDTT 355
Query: 225 VHMYD-AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN 283
+ ++D GK+ VT ++ H V +V P +GS D +K W +Q+++
Sbjct: 356 IRLWDLVAGKTRVT-LTNHKKSVRAVILHPRHYTFASGSPDN-IKQWKFPDGNFIQNLSG 413
Query: 284 H 284
H
Sbjct: 414 H 414
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 26/79 (32%), Positives = 37/79 (46%)
Query: 235 LVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFR 294
L +SGH WV + P TGS+DRT+K+WDL S+T H V GV
Sbjct: 198 LYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVS 257
Query: 295 PLGGRVVSVSDDKSISLYE 313
+ S +DK + ++
Sbjct: 258 ARSPYLFSCGEDKQVKCWD 276
Score = 126 (49.4 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 47/177 (26%), Positives = 73/177 (41%)
Query: 30 PALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDV 89
P L G D+ VK W + ++ R GH V + HP+ + + S DS R++DV
Sbjct: 261 PYLFSCGE-DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 319
Query: 90 DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGL 149
T AS+ TL + V ++ + V G +++LWD TL+
Sbjct: 320 RTKASVHTLSGHTNAVATVKCQAAEPQV-VTGSHDTTIRLWDLVAGKTRVTLT------- 371
Query: 150 KPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSL 206
+ KK V +V P A GS D I + F+ +L GH + +L
Sbjct: 372 ------NHKKSVRAVILHPRHYTFASGSPDN-IKQWKFPDGNFIQNLSGHNAIINTL 421
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 171 (65.3 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 84/315 (26%), Positives = 137/315 (43%)
Query: 27 ETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRV 86
E P+ + D T L +P T T H V VA HP AS S D +++
Sbjct: 84 EASPSAARAKNQDPTNWLPKPSSTH---TLTSHRDAVTCVAFHPVFTSLASGSEDCTIKI 140
Query: 87 FDVDTNASIATLEASPSEVWQMQFD-PKGTTLAVAGGGSASVKLWDTAT-WNLIATLSIP 144
+D + TL+ V + + KG TL + ++KLWD + + I TLS
Sbjct: 141 WDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLS-- 198
Query: 145 RPEGLKPTDKS-SSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMP- 202
G D S SS +F+ S + + S DGT+ ++DV+ + ++
Sbjct: 199 ---G---HDHSVSSVRFLTS-----NDNHLISASRDGTLRIWDVSTGFCVKVIKSATESW 247
Query: 203 VRSLVYSP-VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASW----VLSVDAS----- 252
+R + SP D + L S D + +++ A+ GH ++ V + AS
Sbjct: 248 IRDV--SPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAPPASYEHLA 305
Query: 253 -------PDGAA-----ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRV 300
P A + TG+ D+T+KLW+ R ++++ H + V G+ F P G +
Sbjct: 306 TLAGLKKPPPATSSCEFVATGARDKTIKLWEARGRL-IKTLHGHDNWVRGLVFHPGGKYL 364
Query: 301 VSVSDDKSISLYEYS 315
SVSDDK+I ++ S
Sbjct: 365 FSVSDDKTIRCWDLS 379
Score = 152 (58.6 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 49/202 (24%), Positives = 95/202 (47%)
Query: 12 AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGV--VSVAAH 69
+H ++V V + P + L +GS D T+K+W + ++ERT GH GV +
Sbjct: 112 SHRDAVTCVAFHPVFTS----LASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQ 167
Query: 70 PSGIIAASASLDSFVRVFDVDTN-ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVK 128
+ AS S D ++++D + A+I TL V ++F ++ +++
Sbjct: 168 KGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLR 227
Query: 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 188
+WD +T + + KS+++ ++ V+ S DG+ + G D I+V++V+
Sbjct: 228 IWDVSTGFCVKVI------------KSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVS 275
Query: 189 RAKFLHHLEGHFMPVRSLVYSP 210
A+ L GH + V++P
Sbjct: 276 SAEPKAALLGHENFIECCVFAP 297
Score = 95 (38.5 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 215 VLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
V A D T + +++A G+ L+ + GH +WV + P G + + S D+T++ WDL+
Sbjct: 323 VATGARDKT-IKLWEARGR-LIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQ 380
Query: 275 RAAM 278
+
Sbjct: 381 EGRL 384
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 171 (65.3 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 84/315 (26%), Positives = 137/315 (43%)
Query: 27 ETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRV 86
E P+ + D T L +P T T H V VA HP AS S D +++
Sbjct: 84 EASPSAARAKNQDPTNWLPKPSSTH---TLTSHRDAVTCVAFHPVFTSLASGSEDCTIKI 140
Query: 87 FDVDTNASIATLEASPSEVWQMQFD-PKGTTLAVAGGGSASVKLWDTAT-WNLIATLSIP 144
+D + TL+ V + + KG TL + ++KLWD + + I TLS
Sbjct: 141 WDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLS-- 198
Query: 145 RPEGLKPTDKS-SSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMP- 202
G D S SS +F+ S + + S DGT+ ++DV+ + ++
Sbjct: 199 ---G---HDHSVSSVRFLTS-----NDNHLISASRDGTLRIWDVSTGFCVKVIKSATESW 247
Query: 203 VRSLVYSP-VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASW----VLSVDAS----- 252
+R + SP D + L S D + +++ A+ GH ++ V + AS
Sbjct: 248 IRDV--SPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAPPASYEHLA 305
Query: 253 -------PDGAA-----ITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRV 300
P A + TG+ D+T+KLW+ R ++++ H + V G+ F P G +
Sbjct: 306 TLAGLKKPPPATSSCEFVATGARDKTIKLWEARGRL-IKTLHGHDNWVRGLVFHPGGKYL 364
Query: 301 VSVSDDKSISLYEYS 315
SVSDDK+I ++ S
Sbjct: 365 FSVSDDKTIRCWDLS 379
Score = 152 (58.6 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 49/202 (24%), Positives = 95/202 (47%)
Query: 12 AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGV--VSVAAH 69
+H ++V V + P + L +GS D T+K+W + ++ERT GH GV +
Sbjct: 112 SHRDAVTCVAFHPVFTS----LASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQ 167
Query: 70 PSGIIAASASLDSFVRVFDVDTN-ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVK 128
+ AS S D ++++D + A+I TL V ++F ++ +++
Sbjct: 168 KGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLR 227
Query: 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 188
+WD +T + + KS+++ ++ V+ S DG+ + G D I+V++V+
Sbjct: 228 IWDVSTGFCVKVI------------KSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVS 275
Query: 189 RAKFLHHLEGHFMPVRSLVYSP 210
A+ L GH + V++P
Sbjct: 276 SAEPKAALLGHENFIECCVFAP 297
Score = 95 (38.5 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 215 VLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274
V A D T + +++A G+ L+ + GH +WV + P G + + S D+T++ WDL+
Sbjct: 323 VATGARDKT-IKLWEARGR-LIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQ 380
Query: 275 RAAM 278
+
Sbjct: 381 EGRL 384
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 198 (74.8 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 62/228 (27%), Positives = 105/228 (46%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTA--TWNLIATLSIPRPEGLKPTDK 154
TL+ +W + + PKG A G A +++W TW+ LS +G K T
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKA-IRIWSLTGNTWSTKTILS----DGHKRT-- 61
Query: 155 SSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHH--LEGHFMPVRSLVYSPVD 212
+ + WSP G+ +A S D T +++ + +F + LEGH V+S+ +S
Sbjct: 62 ------IREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR-S 114
Query: 213 PRVLFSASDDTHVHMYDAEGKS---LVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKL 269
+L + S D V +++ G ++ H V V P + + S D T+K+
Sbjct: 115 GGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDVLASASYDNTIKM 174
Query: 270 WDL----NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ N ++T+HT VWG+ F G R+VS SDD +I +++
Sbjct: 175 FAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIWK 222
Score = 163 (62.4 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 60/229 (26%), Positives = 100/229 (43%)
Query: 52 LERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA-SIATL--EASPSEVWQM 108
LE T GH + VA HP G + AS D +R++ + N S T+ + + ++
Sbjct: 6 LEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREI 65
Query: 109 QFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP 168
++ P G LA A A+ +W ++ ++ EG + V SV+WS
Sbjct: 66 RWSPCGQYLASASF-DATTAIWSKSSGEFECNATL---EG--------HENEVKSVSWSR 113
Query: 169 DGRRIACGSMDGTISVFDVT---RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHV 225
G +A S D ++ +++V + L H V+ +V+ P VL SAS D +
Sbjct: 114 SGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKD-VLASASYDNTI 172
Query: 226 HMYDAE----GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
M+ E ++ H S V +D DG + + S D T+K+W
Sbjct: 173 KMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIW 221
Score = 147 (56.8 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 63/235 (26%), Positives = 100/235 (42%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWR---PDDMQLERTNTGHCLGVVSVAAH 69
HE V +V+W LL T S D++V +W D+ + H V V H
Sbjct: 102 HENEVKSVSW----SRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWH 157
Query: 70 PSGIIAASASLDSFVRVF---DVDTNASI-ATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
P+ + ASAS D+ +++F +D + ATL + S VW + FD G L V+
Sbjct: 158 PTKDVLASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERL-VSCSDDT 216
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKP---TDKSSSKKFVLSVAWSPDGRRIACGSMDGTI 182
++K+W A ++ P + + T + + V+W IA D I
Sbjct: 217 TIKIWKAYHPGNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGI 276
Query: 183 SVFDVTR-AK-----F--LHHLEG-HFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
+F T +K F + EG H V S+ ++PV L S SDD + ++
Sbjct: 277 RIFKETSDSKPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIW 331
Score = 104 (41.7 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 54/234 (23%), Positives = 89/234 (38%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWR-PDDMQLERT--NTGHCLG 62
L+ H+ +W V W P + + + D+ +++W + +T + GH
Sbjct: 6 LEHTLQGHKGRIWGVAWHP----KGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRT 61
Query: 63 VVSVAAHPSGIIAASASLDSFVRVFDVDTNA--SIATLEASPSEVWQMQFDPKGTTLAVA 120
+ + P G ASAS D+ ++ + ATLE +EV + + G LA
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 121 GGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG 180
SV +W+ A + ++ L P + V V W P +A S D
Sbjct: 122 SRDK-SVWIWEVAGDDEFECAAV-----LNPHTQD-----VKRVVWHPTKDVLASASYDN 170
Query: 181 TISVFDVTRAK----FLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA 230
TI +F L H V + + D L S SDDT + ++ A
Sbjct: 171 TIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFD-ADGERLVSCSDDTTIKIWKA 223
Score = 52 (23.4 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 284 HTDQVWGVSFRPL-GGRVVSVSDDKSISLYEYS 315
H V V + P+ G+++S SDD +I +++ S
Sbjct: 302 HDQDVNSVQWNPVVAGQLISCSDDGTIKIWKVS 334
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 198 (74.8 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 60/227 (26%), Positives = 104/227 (45%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTA--TWNLIATLSIPRPEGLKPTDK 154
TL+ +W + + PKG A G A +++W TW+ LS +G K T
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKA-IRIWSLTGNTWSTKTILS----DGHKRT-- 61
Query: 155 SSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHH--LEGHFMPVRSLVYSPVD 212
+ + WSP G+ +A S D T +++ + +F + LEGH V+S+ +S
Sbjct: 62 ------IREIQWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR-S 114
Query: 213 PRVLFSASDDTHVHMYDAEGKS---LVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKL 269
+L + S D V +++ G ++ H V V P + + S D T+K+
Sbjct: 115 GGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEILASASYDNTIKM 174
Query: 270 WDL----NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+ N ++T+HT +WG+ F G R+VS SDD ++ ++
Sbjct: 175 YAEEPIDNDWDCTATLTSHTSTIWGIDFDADGERLVSCSDDTTVKIW 221
Score = 173 (66.0 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 61/229 (26%), Positives = 100/229 (43%)
Query: 52 LERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA-SIATL--EASPSEVWQM 108
LE T GH + VA HP G + AS D +R++ + N S T+ + + ++
Sbjct: 6 LEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREI 65
Query: 109 QFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP 168
Q+ P G LA A A+ +W ++ ++ EG + V SV+WS
Sbjct: 66 QWSPCGQYLASASF-DATTAIWSKSSGEFECNATL---EG--------HENEVKSVSWSR 113
Query: 169 DGRRIACGSMDGTISVFDVT---RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHV 225
G +A S D ++ +++V + L H V+ +V+ P +L SAS D +
Sbjct: 114 SGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTK-EILASASYDNTI 172
Query: 226 HMYDAE----GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
MY E ++ H S + +D DG + + S D TVK+W
Sbjct: 173 KMYAEEPIDNDWDCTATLTSHTSTIWGIDFDADGERLVSCSDDTTVKIW 221
Score = 140 (54.3 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 59/235 (25%), Positives = 96/235 (40%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWR---PDDMQLERTNTGHCLGVVSVAAH 69
HE V +V+W LL T S D++V +W D+ + H V V H
Sbjct: 102 HENEVKSVSW----SRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWH 157
Query: 70 PSGIIAASASLDSFVRVF---DVDTNASI-ATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
P+ I ASAS D+ ++++ +D + ATL + S +W + FD G L V+
Sbjct: 158 PTKEILASASYDNTIKMYAEEPIDNDWDCTATLTSHTSTIWGIDFDADGERL-VSCSDDT 216
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKP---TDKSSSKKFVLSVAWSPDGRRIACGSMDGTI 182
+VK+W A ++ P + + T + + V+W IA D I
Sbjct: 217 TVKIWRAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIATACGDDGI 276
Query: 183 SVF---------DVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
+F + T + H V S+ ++PV L S SDD + ++
Sbjct: 277 RIFKETSDSKPDEPTFEQLTAEESAHDQDVNSVQWNPVVAGQLISCSDDGTIKIW 331
Score = 51 (23.0 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 246 VLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPL-GGRVVSVS 304
+++ DG I +SD A +S H V V + P+ G+++S S
Sbjct: 266 LIATACGDDGIRIFKETSDSKPDEPTFEQLTAEESA--HDQDVNSVQWNPVVAGQLISCS 323
Query: 305 DDKSISLYE 313
DD +I +++
Sbjct: 324 DDGTIKIWK 332
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 203 (76.5 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 81/332 (24%), Positives = 143/332 (43%)
Query: 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTG-------HC 60
+V HE V+ W P ++ LL +GS D T ++W + E +N G HC
Sbjct: 218 TVLRGHESEVFICAWNPVSD----LLASGSGDSTARIWNLN----ENSNGGSTQLVLRHC 269
Query: 61 L--G---------VVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQ 109
+ G V S+ + +G + A+ S D F R++ D N + +TL ++ ++
Sbjct: 270 IREGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLA-STLGQHKGPIFALK 328
Query: 110 FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169
++ KG + AG ++ +WD T A P P L V W +
Sbjct: 329 WNRKGNYILSAGVDKTTI-IWDAHTGE--AKQQFPFHSA--PA---------LDVDWQNN 374
Query: 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229
+C S D I V + + + +GH V ++ + P +L S SDD + ++
Sbjct: 375 MTFASC-STDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWS 432
Query: 230 AEGKSLVTAMSGHASWVLSVDASPDGAA---------ITTGSSDRTVKLWDLNMRAAMQS 280
+ + + + H + ++ SP G A + + S D TV+LWD+ +
Sbjct: 433 MKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHT 492
Query: 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLY 312
+T H + V+ V+F P G + S S DK + ++
Sbjct: 493 LTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 524
Score = 174 (66.3 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 71/294 (24%), Positives = 123/294 (41%)
Query: 28 TRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVF 87
T LL TGS D ++W +D L T H + ++ + G SA +D ++
Sbjct: 290 TNGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIW 348
Query: 88 DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE 147
D T EA Q F L V + + T + L RP
Sbjct: 349 DAHTG------EAKQ----QFPFH-SAPALDVDWQNNMTFASCSTDMCIHVCRLGCDRP- 396
Query: 148 GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLV 207
+K +++ V ++ W P G +A S D T+ ++ + + +H L+ H + ++
Sbjct: 397 -VKTFQGHTNE--VNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIK 453
Query: 208 YSPVDPR--------VLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAIT 259
+SP P +L SAS D+ V ++D E ++ H V SV SPDG +
Sbjct: 454 WSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGRYLA 513
Query: 260 TGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+GS D+ V +W+ + S T ++ V + G +V + + D S+ + +
Sbjct: 514 SGSFDKCVHIWNTQSGNLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLD 566
Score = 135 (52.6 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 48/186 (25%), Positives = 79/186 (42%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG 72
H V A+ W P+ LL + S D T+K+W H + ++ P+G
Sbjct: 403 HTNEVNAIKWDPSG----MLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTG 458
Query: 73 ---------IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGG 123
I+ ASAS DS VR++D++ TL V+ + F P G LA +G
Sbjct: 459 PATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGRYLA-SGSF 517
Query: 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183
V +W+T + NL+ + R G + V W+ G ++ + DG++
Sbjct: 518 DKCVHIWNTQSGNLVHSY---RGTG-----------GIFEVCWNARGDKVGASASDGSVC 563
Query: 184 VFDVTR 189
V D+ +
Sbjct: 564 VLDLRK 569
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 197 (74.4 bits), Expect = 9.3e-14, P = 9.3e-14
Identities = 60/228 (26%), Positives = 106/228 (46%)
Query: 97 TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTA--TWNLIATLSIPRPEGLKPTDK 154
TL+ +W + + PKG A G A +++W TW LS +G K T
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKA-IRIWSLNGNTWTTKTILS----DGHKRT-- 61
Query: 155 SSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHH--LEGHFMPVRSLVYSPVD 212
+ + WSP G+ +A S DGT +++ + +F + LEGH V+S+ +S
Sbjct: 62 ------IREIRWSPCGQYLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWSR-S 114
Query: 213 PRVLFSASDDTHVHMYDAEGKS---LVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKL 269
+L + S D V +++ G ++ H V V P + + S D T+K+
Sbjct: 115 GGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKELLASASYDNTIKM 174
Query: 270 WDLNMRAA----MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313
+ + + + ++++HT VW + F G R+VS SDD S+ +++
Sbjct: 175 FAEDALDSDWDCVATLSSHTSTVWSIDFDATGERLVSCSDDTSLKIWQ 222
Score = 157 (60.3 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 59/231 (25%), Positives = 103/231 (44%)
Query: 50 MQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA-SIATL--EASPSEVW 106
+ LE T GH + VA HP G + AS D +R++ ++ N + T+ + +
Sbjct: 4 LNLEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLNGNTWTTKTILSDGHKRTIR 63
Query: 107 QMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW 166
++++ P G LA A + +W ++ ++ EG + V SV+W
Sbjct: 64 EIRWSPCGQYLASASFDGTTA-IWSKSSGEFECNATL---EG--------HENEVKSVSW 111
Query: 167 SPDGRRIACGSMDGTISVFDVT---RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 223
S G +A S D ++ +++V + L H V+ +V+ P +L SAS D
Sbjct: 112 SRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTK-ELLASASYDN 170
Query: 224 HVHMY--DAEGKS--LVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270
+ M+ DA V +S H S V S+D G + + S D ++K+W
Sbjct: 171 TIKMFAEDALDSDWDCVATLSSHTSTVWSIDFDATGERLVSCSDDTSLKIW 221
Score = 157 (60.3 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 66/235 (28%), Positives = 100/235 (42%)
Query: 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWR---PDDMQLERTNTGHCLGVVSVAAH 69
HE V +V+W LL T S D++V +W D+ + H V V H
Sbjct: 102 HENEVKSVSW----SRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWH 157
Query: 70 PSGIIAASASLDSFVRVFDVDTNAS----IATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125
P+ + ASAS D+ +++F D S +ATL + S VW + FD G L V+
Sbjct: 158 PTKELLASASYDNTIKMFAEDALDSDWDCVATLSSHTSTVWSIDFDATGERL-VSCSDDT 216
Query: 126 SVKLWDTATWNLIATLSIPRPEGLKP---TDKSSSKKFVLSVAWSPDGRRIACGSMDGTI 182
S+K+W A ++ P + + T + + V+W IA D I
Sbjct: 217 SLKIWQAYHPGNDAGVATPDKQTVWKCVCTISGQHSRAIYDVSWCKLTNLIATACGDDGI 276
Query: 183 SVFDVTR-AK-----F--LHHLEG-HFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228
+F T +K F L EG H V S+ ++PV L S SDD + ++
Sbjct: 277 RIFKETSDSKRDEPTFEQLTAEEGAHDQDVNSVEWNPVVEGQLISCSDDGTIKVW 331
Score = 123 (48.4 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 56/234 (23%), Positives = 94/234 (40%)
Query: 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPD-DMQLERT--NTGHCLG 62
L+ H+ +W V W P + + + D+ +++W + + +T + GH
Sbjct: 6 LEHTLQGHKGRIWGVAWHP----KGNVFASCGEDKAIRIWSLNGNTWTTKTILSDGHKRT 61
Query: 63 VVSVAAHPSGIIAASASLDSFVRVFDVDTNA--SIATLEASPSEVWQMQFDPKGTTLAVA 120
+ + P G ASAS D ++ + ATLE +EV + + G LA
Sbjct: 62 IREIRWSPCGQYLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 121 GGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG 180
SV +W+ A + ++ L P + V V W P +A S D
Sbjct: 122 SRDK-SVWIWEVAGDDEFECAAV-----LNPHTQD-----VKRVVWHPTKELLASASYDN 170
Query: 181 TISVF--DVTRAKF--LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA 230
TI +F D + + + L H V S+ + R L S SDDT + ++ A
Sbjct: 171 TIKMFAEDALDSDWDCVATLSSHTSTVWSIDFDATGER-LVSCSDDTSLKIWQA 223
Score = 47 (21.6 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 236 VTAMSG-HASWVLSVDASP--DGAAITTGSSDRTVKLWDL 272
+TA G H V SV+ +P +G I+ S D T+K+W +
Sbjct: 295 LTAEEGAHDQDVNSVEWNPVVEGQLISC-SDDGTIKVWKM 333
Score = 46 (21.3 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 284 HTDQVWGVSFRPL-GGRVVSVSDDKSISLYE 313
H V V + P+ G+++S SDD +I +++
Sbjct: 302 HDQDVNSVEWNPVVEGQLISCSDDGTIKVWK 332
WARNING: HSPs involving 1221 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.129 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 315 315 0.00082 116 3 11 22 0.41 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1471
No. of states in DFA: 618 (66 KB)
Total size of DFA: 228 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.91u 0.12s 27.03t Elapsed: 00:00:03
Total cpu time: 27.11u 0.12s 27.23t Elapsed: 00:00:03
Start: Sat May 11 08:54:35 2013 End: Sat May 11 08:54:38 2013
WARNINGS ISSUED: 2