Query 021247
Match_columns 315
No_of_seqs 217 out of 1730
Neff 11.2
Searched_HMMs 29240
Date Mon Mar 25 14:54:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021247.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021247hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 1.2E-54 4.2E-59 363.3 39.9 292 9-315 27-320 (321)
2 1vyh_C Platelet-activating fac 100.0 1.5E-53 5E-58 368.5 39.9 288 9-314 103-409 (410)
3 1got_B GT-beta; complex (GTP-b 100.0 2.4E-51 8.2E-56 346.2 39.8 286 8-313 49-340 (340)
4 2ynn_A Coatomer subunit beta'; 100.0 1.6E-50 5.5E-55 336.0 37.9 293 3-314 2-300 (304)
5 2pbi_B Guanine nucleotide-bind 100.0 7.8E-50 2.7E-54 338.6 39.4 287 8-313 58-354 (354)
6 3iz6_a 40S ribosomal protein R 100.0 1.8E-51 6.2E-56 352.1 29.2 295 8-315 60-374 (380)
7 3frx_A Guanine nucleotide-bind 100.0 7.4E-49 2.5E-53 328.1 39.6 290 4-314 7-315 (319)
8 4gqb_B Methylosome protein 50; 100.0 9.9E-49 3.4E-53 330.0 36.9 284 11-315 27-330 (344)
9 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.7E-48 5.9E-53 329.4 37.6 291 9-315 10-334 (345)
10 4ery_A WD repeat-containing pr 100.0 1E-47 3.4E-52 320.2 41.4 290 7-315 16-311 (312)
11 2hes_X YDR267CP; beta-propelle 100.0 2.6E-48 8.8E-53 326.3 37.5 294 1-315 1-327 (330)
12 1erj_A Transcriptional repress 100.0 6.2E-48 2.1E-52 331.6 40.1 282 12-314 62-387 (393)
13 4g56_B MGC81050 protein; prote 100.0 9.8E-49 3.4E-53 332.2 34.3 285 11-315 39-342 (357)
14 2xzm_R RACK1; ribosome, transl 100.0 1.2E-47 4.2E-52 323.9 39.3 292 7-314 14-338 (343)
15 1nr0_A Actin interacting prote 100.0 8.1E-48 2.8E-52 348.7 40.5 301 9-315 142-566 (611)
16 4aow_A Guanine nucleotide-bind 100.0 2.3E-45 7.9E-50 309.0 41.9 292 4-314 28-335 (340)
17 3zwl_B Eukaryotic translation 100.0 1.2E-45 4E-50 313.8 39.9 298 10-315 28-345 (369)
18 1nr0_A Actin interacting prote 100.0 7.4E-46 2.5E-50 335.8 38.0 287 7-314 52-395 (611)
19 1sq9_A Antiviral protein SKI8; 100.0 3.8E-46 1.3E-50 320.5 34.3 298 3-314 5-393 (397)
20 3dm0_A Maltose-binding peripla 100.0 1.2E-45 4.3E-50 339.2 39.3 291 8-315 376-692 (694)
21 2ynn_A Coatomer subunit beta'; 100.0 2.6E-45 8.8E-50 304.6 37.3 250 51-314 4-257 (304)
22 2ymu_A WD-40 repeat protein; u 100.0 3E-45 1E-49 329.7 40.2 280 9-313 298-577 (577)
23 3k26_A Polycomb protein EED; W 100.0 2.5E-46 8.7E-51 317.7 29.4 295 6-314 10-364 (366)
24 4gqb_B Methylosome protein 50; 100.0 2.6E-45 8.8E-50 309.2 34.0 249 11-276 79-333 (344)
25 1r5m_A SIR4-interacting protei 100.0 2.3E-44 7.7E-49 311.5 38.5 297 12-315 43-424 (425)
26 1vyh_C Platelet-activating fac 100.0 2.7E-44 9.1E-49 310.6 35.1 246 54-314 102-367 (410)
27 2ymu_A WD-40 repeat protein; u 100.0 9.3E-44 3.2E-48 320.1 39.6 295 10-315 12-333 (577)
28 2pm9_A Protein WEB1, protein t 100.0 1.3E-45 4.4E-50 319.0 25.6 294 11-315 64-413 (416)
29 1gxr_A ESG1, transducin-like e 100.0 5.6E-43 1.9E-47 293.8 40.9 281 11-314 48-335 (337)
30 3i2n_A WD repeat-containing pr 100.0 1.1E-44 3.6E-49 306.8 30.2 293 9-315 13-352 (357)
31 3ei3_B DNA damage-binding prot 100.0 8E-44 2.7E-48 304.9 34.2 284 9-315 68-381 (383)
32 1k8k_C P40, ARP2/3 complex 41 100.0 6.7E-44 2.3E-48 303.7 33.4 289 10-314 4-359 (372)
33 2pm9_A Protein WEB1, protein t 100.0 9.2E-45 3.2E-49 313.7 27.6 297 12-315 10-336 (416)
34 3ow8_A WD repeat-containing pr 100.0 2.1E-43 7.3E-48 295.1 34.6 246 9-273 75-320 (321)
35 4g56_B MGC81050 protein; prote 100.0 7.7E-44 2.6E-48 302.1 32.2 249 11-276 91-345 (357)
36 3odt_A Protein DOA1; ubiquitin 100.0 7.3E-43 2.5E-47 290.3 37.2 282 5-315 9-295 (313)
37 4h5i_A Guanine nucleotide-exch 100.0 1.9E-43 6.6E-48 300.5 30.0 279 14-314 14-341 (365)
38 4gga_A P55CDC, cell division c 100.0 4.4E-42 1.5E-46 297.7 38.9 276 16-314 107-393 (420)
39 4aez_A CDC20, WD repeat-contai 100.0 3E-42 1E-46 297.0 36.2 281 12-315 89-379 (401)
40 3gre_A Serine/threonine-protei 100.0 9.4E-43 3.2E-47 303.4 33.1 286 11-313 60-437 (437)
41 3dwl_C Actin-related protein 2 100.0 3.2E-44 1.1E-48 306.6 22.6 285 10-314 7-377 (377)
42 1got_B GT-beta; complex (GTP-b 100.0 9.5E-42 3.2E-46 287.5 37.0 252 51-314 46-299 (340)
43 2j04_B YDR362CP, TAU91; beta p 100.0 1.9E-43 6.5E-48 312.2 27.0 288 12-315 131-516 (524)
44 4e54_B DNA damage-binding prot 100.0 5E-43 1.7E-47 305.0 29.1 286 10-315 115-429 (435)
45 2pm7_B Protein transport prote 100.0 9.8E-42 3.3E-46 282.1 34.0 248 55-314 4-283 (297)
46 3iz6_a 40S ribosomal protein R 100.0 6.2E-43 2.1E-47 299.2 27.6 268 40-314 46-327 (380)
47 4ggc_A P55CDC, cell division c 100.0 6.2E-41 2.1E-45 279.4 38.2 276 17-314 28-313 (318)
48 3vl1_A 26S proteasome regulato 100.0 6.7E-41 2.3E-45 290.0 38.8 299 10-315 94-418 (420)
49 3sfz_A APAF-1, apoptotic pepti 100.0 2.3E-41 7.7E-46 329.2 39.9 288 9-314 610-1032(1249)
50 3vl1_A 26S proteasome regulato 100.0 4.3E-42 1.5E-46 297.5 30.5 280 15-315 57-364 (420)
51 2pm7_B Protein transport prote 100.0 1.9E-41 6.4E-46 280.4 32.5 250 9-274 4-285 (297)
52 2pbi_B Guanine nucleotide-bind 100.0 7.4E-41 2.5E-45 283.5 36.6 256 51-314 55-313 (354)
53 1pgu_A Actin interacting prote 100.0 8.3E-41 2.8E-45 302.7 38.2 299 10-315 156-613 (615)
54 3mkq_A Coatomer beta'-subunit; 100.0 2.7E-41 9.1E-46 315.6 35.3 293 4-314 3-300 (814)
55 3f3f_A Nucleoporin SEH1; struc 100.0 8E-42 2.7E-46 287.6 28.8 305 6-315 3-336 (351)
56 3v7d_B Cell division control p 100.0 1.1E-40 3.7E-45 292.5 36.7 293 9-315 116-420 (464)
57 1yfq_A Cell cycle arrest prote 100.0 2.8E-41 9.7E-46 284.4 31.6 276 8-308 5-315 (342)
58 1p22_A F-BOX/WD-repeat protein 100.0 7.4E-41 2.5E-45 291.3 35.1 274 12-315 131-413 (435)
59 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.5E-41 2.9E-45 282.3 34.1 249 51-314 6-281 (345)
60 4a11_B DNA excision repair pro 100.0 1.4E-40 4.7E-45 286.4 35.4 290 7-315 36-364 (408)
61 1gxr_A ESG1, transducin-like e 100.0 1.3E-40 4.4E-45 279.4 34.3 284 12-315 7-295 (337)
62 3frx_A Guanine nucleotide-bind 100.0 2.7E-40 9.3E-45 276.2 35.9 247 52-315 9-266 (319)
63 3bg1_A Protein SEC13 homolog; 100.0 6.7E-42 2.3E-46 285.6 26.1 248 55-314 8-291 (316)
64 3bg1_A Protein SEC13 homolog; 100.0 2E-41 6.7E-46 282.7 27.9 254 6-273 5-292 (316)
65 2hes_X YDR267CP; beta-propelle 100.0 2.6E-40 8.8E-45 277.6 34.5 247 50-314 4-278 (330)
66 3dw8_B Serine/threonine-protei 100.0 6.3E-41 2.1E-45 292.4 31.8 286 12-313 26-443 (447)
67 4ery_A WD repeat-containing pr 100.0 1.6E-39 5.4E-44 270.7 37.2 251 50-315 13-267 (312)
68 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.9E-39 6.6E-44 283.2 38.5 276 9-315 154-441 (445)
69 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.6E-39 1.2E-43 281.5 39.9 276 7-315 111-390 (445)
70 1erj_A Transcriptional repress 100.0 1.1E-39 3.7E-44 280.3 35.9 251 13-275 122-390 (393)
71 3mmy_A MRNA export factor; mRN 100.0 9.9E-40 3.4E-44 277.2 32.9 287 8-313 33-343 (368)
72 2oaj_A Protein SNI1; WD40 repe 100.0 4.4E-40 1.5E-44 308.8 32.5 296 12-314 56-517 (902)
73 2xzm_R RACK1; ribosome, transl 100.0 7.3E-39 2.5E-43 270.2 36.8 246 52-314 13-283 (343)
74 2oaj_A Protein SNI1; WD40 repe 100.0 4.4E-40 1.5E-44 308.7 31.8 299 10-314 147-659 (902)
75 1pgu_A Actin interacting prote 100.0 7.8E-39 2.7E-43 289.7 37.1 282 10-314 14-326 (615)
76 3v7d_B Cell division control p 100.0 2.2E-38 7.6E-43 277.8 38.2 277 9-312 157-459 (464)
77 2aq5_A Coronin-1A; WD40 repeat 100.0 9.4E-40 3.2E-44 281.5 28.6 280 18-314 38-340 (402)
78 3jrp_A Fusion protein of prote 100.0 1.2E-38 4.2E-43 271.6 32.1 251 52-314 3-285 (379)
79 3sfz_A APAF-1, apoptotic pepti 100.0 7.8E-38 2.7E-42 304.4 39.7 297 10-314 653-1072(1249)
80 3jrp_A Fusion protein of prote 100.0 1E-38 3.6E-43 272.1 28.2 252 7-274 4-287 (379)
81 1k8k_C P40, ARP2/3 complex 41 100.0 2E-37 7E-42 263.6 33.2 244 57-314 5-272 (372)
82 3ei3_B DNA damage-binding prot 100.0 9.7E-38 3.3E-42 267.1 30.9 250 50-314 63-337 (383)
83 4aow_A Guanine nucleotide-bind 100.0 6.9E-37 2.4E-41 257.2 35.3 250 49-314 27-284 (340)
84 3mkq_A Coatomer beta'-subunit; 100.0 3.1E-37 1.1E-41 288.2 36.0 288 9-314 50-384 (814)
85 3dwl_C Actin-related protein 2 100.0 7.6E-39 2.6E-43 273.3 21.5 241 59-314 10-279 (377)
86 3bws_A Protein LP49; two-domai 100.0 1.3E-36 4.4E-41 264.2 35.9 280 15-315 123-431 (433)
87 3vu4_A KMHSV2; beta-propeller 100.0 8.2E-37 2.8E-41 258.8 33.1 275 9-314 14-334 (355)
88 3k26_A Polycomb protein EED; W 100.0 1.6E-37 5.5E-42 263.5 28.7 258 13-273 68-365 (366)
89 1sq9_A Antiviral protein SKI8; 100.0 2.7E-37 9.2E-42 265.4 30.0 253 9-275 57-396 (397)
90 3dm0_A Maltose-binding peripla 100.0 1.8E-36 6.2E-41 278.4 36.8 245 54-314 376-630 (694)
91 3dw8_B Serine/threonine-protei 100.0 3.8E-37 1.3E-41 268.5 30.1 256 58-315 26-372 (447)
92 2xyi_A Probable histone-bindin 100.0 4.6E-37 1.6E-41 267.0 30.3 293 16-315 47-409 (430)
93 3i2n_A WD repeat-containing pr 100.0 5E-37 1.7E-41 259.7 29.6 250 11-276 62-355 (357)
94 1r5m_A SIR4-interacting protei 100.0 2.7E-36 9.3E-41 260.8 34.4 257 41-314 26-359 (425)
95 1l0q_A Surface layer protein; 100.0 2.2E-35 7.6E-40 253.0 39.0 265 31-314 3-273 (391)
96 3zwl_B Eukaryotic translation 100.0 9.2E-36 3.1E-40 252.8 36.2 244 54-314 26-302 (369)
97 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.7E-36 1.6E-40 262.2 34.9 282 14-314 4-389 (450)
98 3gre_A Serine/threonine-protei 100.0 2.8E-37 9.7E-42 268.8 25.2 266 44-315 47-358 (437)
99 3odt_A Protein DOA1; ubiquitin 100.0 8.3E-36 2.8E-40 247.7 32.9 245 50-314 8-253 (313)
100 2xyi_A Probable histone-bindin 100.0 9.4E-37 3.2E-41 265.1 28.0 250 10-275 124-411 (430)
101 4gga_A P55CDC, cell division c 100.0 1.4E-35 4.7E-40 257.0 34.6 262 11-289 144-410 (420)
102 4a11_B DNA excision repair pro 100.0 9.7E-36 3.3E-40 256.1 33.0 297 11-314 96-403 (408)
103 3jro_A Fusion protein of prote 100.0 7.8E-37 2.7E-41 282.7 27.7 250 54-315 3-284 (753)
104 2j04_A TAU60, YPL007P, hypothe 100.0 2.7E-37 9.2E-42 268.0 22.4 267 11-314 12-295 (588)
105 4aez_A CDC20, WD repeat-contai 100.0 1.8E-35 6.3E-40 254.7 32.8 248 12-281 132-387 (401)
106 4e54_B DNA damage-binding prot 100.0 1.3E-36 4.3E-41 264.7 25.8 250 53-314 112-385 (435)
107 3lrv_A PRE-mRNA-splicing facto 100.0 3.6E-36 1.2E-40 253.8 27.3 259 31-313 49-330 (343)
108 3jro_A Fusion protein of prote 100.0 5.8E-37 2E-41 283.6 24.4 252 7-274 2-285 (753)
109 2j04_B YDR362CP, TAU91; beta p 100.0 4.3E-37 1.5E-41 271.7 22.5 240 69-314 170-426 (524)
110 1yfq_A Cell cycle arrest prote 100.0 7.2E-36 2.5E-40 251.3 28.7 245 54-315 5-281 (342)
111 4h5i_A Guanine nucleotide-exch 100.0 1E-35 3.5E-40 252.9 27.9 250 10-274 69-343 (365)
112 3vu4_A KMHSV2; beta-propeller 100.0 2.4E-35 8.2E-40 249.8 28.8 245 44-314 3-269 (355)
113 4gq1_A NUP37; propeller, trans 100.0 2.4E-36 8.1E-41 259.4 21.3 248 31-308 102-382 (393)
114 2w18_A PALB2, fancn, partner a 100.0 9.2E-35 3.1E-39 237.7 29.3 278 16-315 41-356 (356)
115 2j04_A TAU60, YPL007P, hypothe 100.0 6.4E-35 2.2E-39 253.2 27.2 261 11-305 49-350 (588)
116 2aq5_A Coronin-1A; WD40 repeat 100.0 6.8E-35 2.3E-39 251.2 26.0 249 9-276 76-344 (402)
117 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.8E-34 1.3E-38 250.1 30.7 241 61-314 5-337 (450)
118 1p22_A F-BOX/WD-repeat protein 100.0 3.9E-33 1.3E-37 242.6 34.7 231 57-314 130-363 (435)
119 4ggc_A P55CDC, cell division c 100.0 3.8E-33 1.3E-37 232.2 32.5 248 11-275 64-316 (318)
120 3lrv_A PRE-mRNA-splicing facto 100.0 1.7E-34 5.8E-39 243.5 23.8 237 67-314 43-290 (343)
121 3mmy_A MRNA export factor; mRN 100.0 1E-32 3.5E-37 233.9 33.5 252 45-315 24-303 (368)
122 1l0q_A Surface layer protein; 100.0 6.9E-32 2.4E-36 231.3 38.2 281 12-315 30-341 (391)
123 3f3f_A Nucleoporin SEH1; struc 100.0 4.9E-31 1.7E-35 221.6 27.6 211 54-278 5-253 (351)
124 1nir_A Nitrite reductase; hemo 100.0 2.1E-29 7E-34 224.2 34.5 280 17-314 181-512 (543)
125 2w18_A PALB2, fancn, partner a 100.0 1.9E-30 6.4E-35 212.3 24.8 244 10-272 82-355 (356)
126 2hqs_A Protein TOLB; TOLB, PAL 100.0 3.6E-30 1.2E-34 222.4 26.0 278 14-314 62-385 (415)
127 3bws_A Protein LP49; two-domai 100.0 8.6E-29 2.9E-33 214.9 34.0 244 9-274 164-432 (433)
128 1nir_A Nitrite reductase; hemo 100.0 1.2E-28 4.2E-33 219.2 31.0 278 31-315 150-457 (543)
129 4gq1_A NUP37; propeller, trans 100.0 1E-30 3.4E-35 224.4 16.7 230 8-273 130-388 (393)
130 3u4y_A Uncharacterized protein 100.0 5.1E-28 1.7E-32 202.6 29.9 268 31-315 11-303 (331)
131 1ri6_A Putative isomerase YBHE 100.0 8.8E-28 3E-32 201.8 29.6 267 32-314 7-306 (343)
132 2hqs_A Protein TOLB; TOLB, PAL 100.0 3.1E-27 1.1E-31 204.0 33.3 246 32-298 145-410 (415)
133 2ecf_A Dipeptidyl peptidase IV 100.0 1.2E-27 4.1E-32 221.4 29.6 286 14-314 36-411 (741)
134 3vgz_A Uncharacterized protein 100.0 2.5E-26 8.6E-31 193.8 34.7 274 12-306 38-334 (353)
135 2ojh_A Uncharacterized protein 100.0 2.9E-27 1E-31 194.2 24.3 257 34-307 16-293 (297)
136 1pby_B Quinohemoprotein amine 100.0 1.6E-26 5.6E-31 193.5 28.2 261 32-314 3-308 (337)
137 3o4h_A Acylamino-acid-releasin 100.0 6.2E-27 2.1E-31 210.9 25.5 282 1-313 7-312 (582)
138 1xfd_A DIP, dipeptidyl aminope 100.0 6E-27 2E-31 216.1 25.1 291 15-315 17-392 (723)
139 3hfq_A Uncharacterized protein 100.0 9.5E-25 3.2E-29 184.0 33.0 272 38-314 14-315 (347)
140 2z3z_A Dipeptidyl aminopeptida 99.9 4E-25 1.4E-29 203.4 28.1 279 15-314 82-433 (706)
141 1k32_A Tricorn protease; prote 99.9 1.4E-25 4.8E-30 214.6 25.9 275 11-313 200-499 (1045)
142 1ri6_A Putative isomerase YBHE 99.9 1.8E-24 6.2E-29 181.5 27.5 269 12-298 35-335 (343)
143 1k32_A Tricorn protease; prote 99.9 1.2E-24 4.3E-29 208.1 29.2 294 9-314 47-459 (1045)
144 2ecf_A Dipeptidyl peptidase IV 99.9 9E-25 3.1E-29 202.1 27.1 279 15-314 109-457 (741)
145 3scy_A Hypothetical bacterial 99.9 3.1E-23 1.1E-27 175.8 33.8 280 32-315 15-336 (361)
146 3vgz_A Uncharacterized protein 99.9 2.2E-23 7.6E-28 175.7 31.2 248 59-314 39-301 (353)
147 2z3z_A Dipeptidyl aminopeptida 99.9 2E-24 6.8E-29 198.8 25.5 283 16-314 27-387 (706)
148 1jmx_B Amine dehydrogenase; ox 99.9 9.2E-24 3.2E-28 177.7 27.4 267 31-314 12-323 (349)
149 3u4y_A Uncharacterized protein 99.9 5.7E-23 2E-27 171.8 29.2 231 68-314 5-250 (331)
150 2ojh_A Uncharacterized protein 99.9 8E-24 2.7E-28 173.6 23.4 234 10-265 37-293 (297)
151 1z68_A Fibroblast activation p 99.9 1.3E-24 4.5E-29 200.4 20.4 299 1-314 1-389 (719)
152 1xfd_A DIP, dipeptidyl aminope 99.9 1.3E-23 4.5E-28 193.8 25.9 283 10-304 53-428 (723)
153 2oit_A Nucleoporin 214KDA; NH2 99.9 1.2E-23 4.2E-28 182.2 21.4 222 82-314 23-276 (434)
154 3hfq_A Uncharacterized protein 99.9 2.7E-22 9.2E-27 169.0 27.8 252 12-278 37-323 (347)
155 3o4h_A Acylamino-acid-releasin 99.9 1.6E-23 5.5E-28 188.6 20.5 232 60-314 21-274 (582)
156 1pby_B Quinohemoprotein amine 99.9 9.9E-23 3.4E-27 170.5 23.0 244 16-284 35-320 (337)
157 3pe7_A Oligogalacturonate lyas 99.9 3.4E-22 1.2E-26 170.8 25.5 284 11-314 27-380 (388)
158 2oit_A Nucleoporin 214KDA; NH2 99.9 2.2E-22 7.6E-27 174.3 23.1 216 40-275 23-279 (434)
159 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.6E-21 5.6E-26 165.4 27.5 272 32-314 4-339 (365)
160 3scy_A Hypothetical bacterial 99.9 9.7E-21 3.3E-25 160.4 31.6 262 13-294 48-360 (361)
161 3fvz_A Peptidyl-glycine alpha- 99.9 1.5E-19 5.1E-24 151.2 31.0 249 60-314 23-320 (329)
162 1q7f_A NHL, brain tumor CG1071 99.9 4.3E-19 1.5E-23 145.3 33.0 237 58-314 27-278 (286)
163 1z68_A Fibroblast activation p 99.9 1E-21 3.4E-26 181.2 17.0 232 65-313 20-341 (719)
164 3c5m_A Oligogalacturonate lyas 99.9 6.7E-21 2.3E-25 163.0 19.3 278 15-314 36-380 (396)
165 2oiz_A Aromatic amine dehydrog 99.9 1.9E-19 6.3E-24 152.4 27.5 256 38-298 29-360 (361)
166 3fvz_A Peptidyl-glycine alpha- 99.9 2.3E-18 7.8E-23 144.0 33.4 252 13-274 22-322 (329)
167 4a5s_A Dipeptidyl peptidase 4 99.9 5E-20 1.7E-24 170.3 25.5 286 12-313 14-395 (740)
168 3azo_A Aminopeptidase; POP fam 99.9 6.1E-20 2.1E-24 167.7 25.3 284 9-313 18-364 (662)
169 1jof_A Carboxy-CIS,CIS-muconat 99.9 2.3E-19 7.8E-24 152.2 24.3 243 15-275 40-342 (365)
170 1q7f_A NHL, brain tumor CG1071 99.8 2.2E-17 7.6E-22 135.1 34.0 242 11-275 26-281 (286)
171 2dg1_A DRP35, lactonase; beta 99.8 2.4E-18 8.3E-23 143.9 28.6 270 15-306 6-300 (333)
172 2gop_A Trilobed protease; beta 99.8 4.7E-18 1.6E-22 142.9 28.4 259 13-314 13-329 (347)
173 1jmx_B Amine dehydrogenase; ox 99.8 1.6E-18 5.5E-23 145.6 24.8 249 16-284 44-335 (349)
174 3azo_A Aminopeptidase; POP fam 99.8 1.7E-18 5.7E-23 158.2 23.6 248 55-314 18-321 (662)
175 3dsm_A Uncharacterized protein 99.8 5.5E-17 1.9E-21 135.5 30.9 260 39-314 16-300 (328)
176 3pe7_A Oligogalacturonate lyas 99.8 3.1E-18 1.1E-22 146.2 23.6 254 45-314 15-327 (388)
177 4a5s_A Dipeptidyl peptidase 4 99.8 1.2E-18 4.3E-23 161.0 21.9 235 62-314 18-351 (740)
178 2z2n_A Virginiamycin B lyase; 99.8 3.4E-15 1.2E-19 122.5 39.2 276 12-314 12-293 (299)
179 1rwi_B Serine/threonine-protei 99.8 4.7E-17 1.6E-21 131.9 26.8 237 62-314 25-262 (270)
180 2oiz_A Aromatic amine dehydrog 99.8 3.9E-17 1.3E-21 138.1 27.0 221 80-314 29-332 (361)
181 3e5z_A Putative gluconolactona 99.8 6.1E-17 2.1E-21 133.2 27.2 234 58-310 25-281 (296)
182 1qks_A Cytochrome CD1 nitrite 99.8 8.1E-16 2.8E-20 136.8 35.2 282 31-314 168-536 (567)
183 1rwi_B Serine/threonine-protei 99.8 1.5E-16 5.2E-21 128.8 27.4 242 16-278 25-268 (270)
184 2xdw_A Prolyl endopeptidase; a 99.8 1.8E-16 6.2E-21 145.9 29.5 246 58-314 122-412 (710)
185 3no2_A Uncharacterized protein 99.8 8E-16 2.7E-20 125.0 28.1 218 31-262 6-231 (276)
186 3c5m_A Oligogalacturonate lyas 99.8 1.7E-17 6E-22 141.8 19.0 262 46-314 16-327 (396)
187 3e5z_A Putative gluconolactona 99.8 2E-15 6.8E-20 124.1 29.1 238 12-276 25-288 (296)
188 3no2_A Uncharacterized protein 99.8 8E-16 2.7E-20 125.0 26.1 214 71-304 4-231 (276)
189 2qc5_A Streptogramin B lactona 99.8 7.3E-14 2.5E-18 114.5 37.3 275 14-314 19-298 (300)
190 3dsm_A Uncharacterized protein 99.8 1.1E-15 3.6E-20 127.7 25.6 253 15-294 44-320 (328)
191 2xdw_A Prolyl endopeptidase; a 99.7 1.5E-15 5.1E-20 139.8 28.5 247 10-276 120-416 (710)
192 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 7.9E-15 2.7E-19 121.3 30.0 240 61-314 18-297 (314)
193 2dg1_A DRP35, lactonase; beta 99.7 2.8E-14 9.7E-19 119.1 32.8 231 12-264 42-300 (333)
194 2gop_A Trilobed protease; beta 99.7 1.3E-15 4.3E-20 128.0 24.3 216 62-314 16-289 (347)
195 2bkl_A Prolyl endopeptidase; m 99.7 7.2E-16 2.5E-20 141.5 23.0 241 58-314 118-395 (695)
196 3hrp_A Uncharacterized protein 99.7 3E-14 1E-18 122.3 30.8 240 62-315 132-409 (409)
197 2mad_H Methylamine dehydrogena 99.7 1.5E-13 5.2E-18 116.4 34.7 251 41-314 48-348 (373)
198 2bkl_A Prolyl endopeptidase; m 99.7 4.7E-16 1.6E-20 142.8 20.4 244 10-276 116-399 (695)
199 3sjl_D Methylamine dehydrogena 99.7 3.1E-15 1.1E-19 125.5 23.1 256 39-314 58-361 (386)
200 2z2n_A Virginiamycin B lyase; 99.7 3.1E-13 1E-17 110.8 34.8 237 58-314 12-253 (299)
201 1qks_A Cytochrome CD1 nitrite 99.7 2.1E-13 7E-18 121.4 31.3 228 70-314 165-419 (567)
202 1yr2_A Prolyl oligopeptidase; 99.7 2.9E-14 9.8E-19 131.9 26.6 243 59-314 161-439 (741)
203 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 2.8E-13 9.5E-18 112.0 29.3 236 16-274 19-299 (314)
204 3g4e_A Regucalcin; six bladed 99.7 4.4E-13 1.5E-17 110.2 30.0 227 63-305 15-261 (297)
205 2qc5_A Streptogramin B lactona 99.7 3.9E-12 1.3E-16 104.2 34.8 237 59-314 18-258 (300)
206 3c75_H MADH, methylamine dehyd 99.6 1.4E-13 4.9E-18 117.4 22.1 254 40-314 99-400 (426)
207 3hrp_A Uncharacterized protein 99.6 1.7E-12 5.7E-17 111.4 28.8 241 14-272 130-408 (409)
208 1yr2_A Prolyl oligopeptidase; 99.6 3.8E-13 1.3E-17 124.4 25.7 245 10-276 158-443 (741)
209 3g4e_A Regucalcin; six bladed 99.6 5.1E-12 1.7E-16 103.8 29.8 232 9-262 7-260 (297)
210 2mad_H Methylamine dehydrogena 99.6 1.1E-11 3.8E-16 104.9 31.9 245 19-281 70-357 (373)
211 2ghs_A AGR_C_1268P; regucalcin 99.6 1.7E-11 5.8E-16 102.1 31.4 224 64-305 52-291 (326)
212 1xip_A Nucleoporin NUP159; bet 99.6 2.3E-13 7.7E-18 114.7 18.0 184 104-305 39-233 (388)
213 2ghs_A AGR_C_1268P; regucalcin 99.6 3.1E-11 1.1E-15 100.5 30.5 222 16-262 50-290 (326)
214 3dr2_A Exported gluconolactona 99.5 8.8E-12 3E-16 102.7 25.4 231 61-311 45-302 (305)
215 3iuj_A Prolyl endopeptidase; h 99.5 1.1E-12 3.7E-17 120.4 21.7 239 58-314 126-403 (693)
216 1xip_A Nucleoporin NUP159; bet 99.5 1.5E-12 5.1E-17 109.7 18.5 171 16-218 39-230 (388)
217 2qe8_A Uncharacterized protein 99.5 1.2E-11 4E-16 103.8 23.6 248 15-267 17-314 (343)
218 3iuj_A Prolyl endopeptidase; h 99.5 7.5E-12 2.6E-16 114.8 24.2 246 8-276 122-407 (693)
219 2qe8_A Uncharacterized protein 99.5 2.1E-12 7.2E-17 108.3 18.9 239 61-309 17-314 (343)
220 3sjl_D Methylamine dehydrogena 99.5 2.8E-11 9.6E-16 101.6 25.2 258 19-296 82-384 (386)
221 1mda_H Methylamine dehydrogena 99.5 3.8E-12 1.3E-16 106.9 19.7 254 32-314 34-344 (368)
222 3c75_H MADH, methylamine dehyd 99.5 1.9E-11 6.5E-16 104.3 23.8 246 19-281 122-409 (426)
223 1kb0_A Quinohemoprotein alcoho 99.4 5.6E-11 1.9E-15 108.4 25.6 266 31-303 129-537 (677)
224 1npe_A Nidogen, entactin; glyc 99.4 2E-09 6.8E-14 86.8 32.0 244 40-298 10-263 (267)
225 1yiq_A Quinohemoprotein alcoho 99.4 1.1E-10 3.7E-15 106.7 25.4 280 31-314 71-503 (689)
226 1kb0_A Quinohemoprotein alcoho 99.4 1.5E-10 5.3E-15 105.5 24.8 278 31-314 78-505 (677)
227 2hz6_A Endoplasmic reticulum t 99.4 8.4E-15 2.9E-19 124.1 -3.0 253 30-313 9-276 (369)
228 3dr2_A Exported gluconolactona 99.4 6.2E-10 2.1E-14 91.6 26.3 224 14-265 44-298 (305)
229 2ece_A 462AA long hypothetical 99.4 8.8E-10 3E-14 93.4 25.8 223 70-304 93-399 (462)
230 3q7m_A Lipoprotein YFGL, BAMB; 99.4 2.1E-09 7.3E-14 91.1 28.3 264 31-313 104-375 (376)
231 1yiq_A Quinohemoprotein alcoho 99.4 7E-10 2.4E-14 101.3 26.9 264 31-301 122-533 (689)
232 1mda_H Methylamine dehydrogena 99.3 4.7E-11 1.6E-15 100.3 16.5 250 19-295 69-366 (368)
233 3q7m_A Lipoprotein YFGL, BAMB; 99.3 4.3E-09 1.5E-13 89.2 27.8 264 31-314 54-335 (376)
234 2hz6_A Endoplasmic reticulum t 99.3 1.3E-12 4.6E-17 110.6 5.0 204 71-297 8-215 (369)
235 2iwa_A Glutamine cyclotransfer 99.3 3E-09 1E-13 84.7 23.6 195 62-275 22-238 (266)
236 1fwx_A Nitrous oxide reductase 99.3 3.5E-10 1.2E-14 99.1 19.5 220 70-305 99-407 (595)
237 3hxj_A Pyrrolo-quinoline quino 99.3 1.8E-10 6E-15 95.7 15.4 251 31-313 31-281 (330)
238 2iwa_A Glutamine cyclotransfer 99.3 1.8E-08 6.2E-13 80.2 26.1 202 94-314 11-235 (266)
239 1npe_A Nidogen, entactin; glyc 99.3 6.8E-08 2.3E-12 77.7 30.1 217 82-314 10-236 (267)
240 3hxj_A Pyrrolo-quinoline quino 99.2 1.6E-09 5.4E-14 89.9 20.8 250 32-313 72-321 (330)
241 2ece_A 462AA long hypothetical 99.2 7.8E-09 2.7E-13 87.6 24.2 222 28-262 94-399 (462)
242 3nol_A Glutamine cyclotransfer 99.2 9.1E-09 3.1E-13 81.0 22.0 181 63-264 45-245 (262)
243 2p4o_A Hypothetical protein; p 99.2 2E-07 6.7E-12 76.7 29.7 225 62-305 33-277 (306)
244 3v64_C Agrin; beta propeller, 99.2 3E-07 1E-11 77.0 30.9 227 39-280 52-281 (349)
245 3v65_B Low-density lipoprotein 99.2 1.7E-07 5.8E-12 79.7 29.5 229 38-281 94-325 (386)
246 3nol_A Glutamine cyclotransfer 99.1 2.7E-08 9.4E-13 78.3 21.6 190 95-305 34-244 (262)
247 1kv9_A Type II quinohemoprotei 99.1 2.3E-08 7.7E-13 91.2 24.4 280 31-314 67-486 (668)
248 3nok_A Glutaminyl cyclase; bet 99.1 1.4E-08 5E-13 79.9 19.7 178 63-263 57-254 (268)
249 3v64_C Agrin; beta propeller, 99.1 8.2E-07 2.8E-11 74.3 30.7 233 64-313 37-272 (349)
250 3mbr_X Glutamine cyclotransfer 99.1 1.1E-07 3.9E-12 74.2 23.4 182 62-264 22-224 (243)
251 2fp8_A Strictosidine synthase; 99.1 2.6E-07 9E-12 76.4 27.0 238 62-314 20-311 (322)
252 3mbr_X Glutamine cyclotransfer 99.1 2.9E-07 1E-11 71.8 24.8 191 95-305 12-223 (243)
253 4a2l_A BT_4663, two-component 99.1 9.7E-06 3.3E-10 75.6 39.1 277 14-313 214-523 (795)
254 1kv9_A Type II quinohemoprotei 99.1 6.1E-08 2.1E-12 88.3 23.7 263 31-299 118-514 (668)
255 3nok_A Glutaminyl cyclase; bet 99.0 1.9E-07 6.6E-12 73.5 22.7 189 95-304 46-253 (268)
256 3v65_B Low-density lipoprotein 99.0 1.3E-06 4.6E-11 74.1 29.7 232 65-313 81-315 (386)
257 1ijq_A LDL receptor, low-densi 99.0 4.4E-06 1.5E-10 68.9 31.7 224 40-278 10-242 (316)
258 1fwx_A Nitrous oxide reductase 99.0 3.1E-08 1.1E-12 86.9 19.3 214 32-263 104-407 (595)
259 4a2l_A BT_4663, two-component 99.0 1.2E-05 4.2E-10 74.8 38.0 277 17-313 175-477 (795)
260 1k3i_A Galactose oxidase precu 99.0 5.6E-08 1.9E-12 88.6 21.5 264 32-305 200-530 (656)
261 3p5b_L Low density lipoprotein 99.0 8.4E-06 2.9E-10 69.5 34.0 234 32-281 85-327 (400)
262 2ad6_A Methanol dehydrogenase 99.0 5.2E-07 1.8E-11 80.6 26.1 279 31-314 63-492 (571)
263 2ad6_A Methanol dehydrogenase 99.0 3.9E-07 1.3E-11 81.4 25.1 267 31-302 116-523 (571)
264 3sov_A LRP-6, low-density lipo 98.9 4.5E-06 1.5E-10 68.8 28.3 226 39-278 12-242 (318)
265 1w6s_A Methanol dehydrogenase 98.9 2.4E-06 8.1E-11 76.5 27.7 280 31-314 63-501 (599)
266 1ijq_A LDL receptor, low-densi 98.9 1.5E-05 5E-10 65.7 32.1 218 81-313 9-235 (316)
267 2fp8_A Strictosidine synthase; 98.9 2.7E-06 9.4E-11 70.3 25.8 233 17-274 21-313 (322)
268 1flg_A Protein (quinoprotein e 98.9 1.4E-05 4.7E-10 71.5 30.8 266 31-301 118-544 (582)
269 3sov_A LRP-6, low-density lipo 98.9 6.6E-06 2.3E-10 67.8 26.5 221 81-314 12-236 (318)
270 3tc9_A Hypothetical hydrolase; 98.8 8.9E-06 3E-10 70.0 27.3 235 62-314 138-428 (430)
271 1flg_A Protein (quinoprotein e 98.8 2.6E-05 8.9E-10 69.8 31.0 277 31-314 69-514 (582)
272 3qqz_A Putative uncharacterize 98.8 1.4E-05 4.7E-10 63.3 26.0 201 98-313 22-250 (255)
273 3m0c_C LDL receptor, low-densi 98.8 3E-05 1E-09 71.6 31.8 227 39-280 403-638 (791)
274 3p5b_L Low density lipoprotein 98.8 4.2E-05 1.4E-09 65.2 30.9 219 80-313 90-317 (400)
275 1w6s_A Methanol dehydrogenase 98.8 3.7E-06 1.2E-10 75.3 24.5 262 33-300 124-530 (599)
276 3v9f_A Two-component system se 98.8 6.2E-05 2.1E-09 70.0 33.6 274 15-313 258-565 (781)
277 3tc9_A Hypothetical hydrolase; 98.7 2.8E-05 9.7E-10 66.9 27.3 239 16-273 138-429 (430)
278 3v9f_A Two-component system se 98.7 0.00017 5.8E-09 67.1 34.9 280 15-313 211-521 (781)
279 1k3i_A Galactose oxidase precu 98.7 1.2E-06 4E-11 79.9 18.0 236 65-314 190-495 (656)
280 4hw6_A Hypothetical protein, I 98.7 5.2E-05 1.8E-09 65.3 27.2 235 62-314 140-431 (433)
281 3qqz_A Putative uncharacterize 98.6 8.2E-05 2.8E-09 58.8 27.9 206 55-271 21-250 (255)
282 4hw6_A Hypothetical protein, I 98.6 7.4E-05 2.5E-09 64.3 26.9 240 16-273 140-432 (433)
283 4a0p_A LRP6, LRP-6, low-densit 98.6 0.00026 9E-09 63.8 32.1 223 38-276 13-239 (628)
284 1n7d_A LDL receptor, low-densi 98.6 3.7E-07 1.3E-11 83.5 13.0 229 39-282 385-622 (699)
285 3m0c_C LDL receptor, low-densi 98.6 0.00018 6.3E-09 66.4 30.2 218 80-313 402-629 (791)
286 2p4o_A Hypothetical protein; p 98.6 0.00015 5E-09 59.4 28.9 235 15-265 32-279 (306)
287 2xe4_A Oligopeptidase B; hydro 98.6 1.8E-05 6.1E-10 73.2 22.6 195 104-313 175-395 (751)
288 3s94_A LRP-6, low-density lipo 98.6 0.00012 4.1E-09 66.0 27.0 227 38-278 16-247 (619)
289 4a0p_A LRP6, LRP-6, low-densit 98.6 0.0004 1.4E-08 62.7 30.4 218 80-313 13-234 (628)
290 3kya_A Putative phosphatase; s 98.5 0.00035 1.2E-08 60.6 27.9 236 63-314 141-473 (496)
291 3amr_A 3-phytase; beta-propell 98.5 0.00013 4.4E-09 60.0 23.3 202 21-239 31-271 (355)
292 2xe4_A Oligopeptidase B; hydro 98.5 9.5E-05 3.3E-09 68.4 25.3 200 11-230 169-398 (751)
293 3s94_A LRP-6, low-density lipo 98.5 0.00013 4.6E-09 65.7 24.9 221 80-313 16-240 (619)
294 1n7d_A LDL receptor, low-densi 98.4 3.9E-06 1.3E-10 76.8 12.8 219 80-313 384-611 (699)
295 3kya_A Putative phosphatase; s 98.4 0.001 3.6E-08 57.7 28.2 246 16-279 140-480 (496)
296 2xbg_A YCF48-like protein; pho 98.3 0.00077 2.6E-08 55.7 33.5 267 14-313 35-319 (327)
297 2p9w_A MAL S 1 allergenic prot 98.3 0.00052 1.8E-08 56.0 22.1 200 106-313 16-262 (334)
298 3amr_A 3-phytase; beta-propell 98.1 0.0027 9.1E-08 52.3 24.9 205 65-281 30-271 (355)
299 2ism_A Putative oxidoreductase 98.1 0.0035 1.2E-07 52.3 26.8 229 62-304 32-333 (352)
300 2p9w_A MAL S 1 allergenic prot 98.1 0.00065 2.2E-08 55.4 18.0 152 161-314 15-213 (334)
301 3ei3_A DNA damage-binding prot 98.0 0.015 5.1E-07 56.2 31.7 130 182-314 809-953 (1158)
302 2vpj_A Kelch-like protein 12; 97.8 0.0038 1.3E-07 50.6 18.6 222 31-275 16-279 (301)
303 3ii7_A Kelch-like protein 7; p 97.8 0.0051 1.7E-07 50.0 19.2 223 30-275 12-273 (306)
304 2vpj_A Kelch-like protein 12; 97.8 0.0047 1.6E-07 50.1 18.6 209 82-314 31-276 (301)
305 2xbg_A YCF48-like protein; pho 97.7 0.016 5.3E-07 47.7 30.0 226 61-310 36-273 (327)
306 2xn4_A Kelch-like protein 2; s 97.6 0.0092 3.2E-07 48.3 18.8 222 31-275 17-277 (302)
307 4asc_A Kelch repeat and BTB do 97.6 0.021 7.1E-07 46.6 20.1 220 32-275 7-278 (315)
308 2xn4_A Kelch-like protein 2; s 97.5 0.012 4E-07 47.7 18.0 218 73-314 17-274 (302)
309 3ii7_A Kelch-like protein 7; p 97.5 0.022 7.4E-07 46.2 19.6 219 72-314 12-270 (306)
310 2xzh_A Clathrin heavy chain 1; 97.5 0.028 9.6E-07 45.7 32.3 253 40-310 49-326 (365)
311 3a9g_A Putative uncharacterize 97.5 0.033 1.1E-06 46.4 26.9 230 62-304 30-330 (354)
312 3sre_A PON1, serum paraoxonase 97.4 0.037 1.3E-06 46.0 23.4 187 62-264 51-287 (355)
313 2ism_A Putative oxidoreductase 97.4 0.038 1.3E-06 46.0 24.5 228 15-261 31-332 (352)
314 4asc_A Kelch repeat and BTB do 97.4 0.026 8.9E-07 46.0 18.1 210 74-306 7-253 (315)
315 2g8s_A Glucose/sorbosone dehyd 97.3 0.051 1.7E-06 45.2 23.9 237 62-310 19-348 (353)
316 1zgk_A Kelch-like ECH-associat 97.3 0.03 1E-06 45.5 17.3 221 70-314 23-285 (308)
317 1zgk_A Kelch-like ECH-associat 97.2 0.027 9.4E-07 45.7 16.5 221 31-274 26-287 (308)
318 2woz_A Kelch repeat and BTB do 97.2 0.068 2.3E-06 43.6 19.0 209 74-306 18-263 (318)
319 3ei3_A DNA damage-binding prot 97.2 0.2 6.7E-06 48.6 28.8 140 170-314 844-997 (1158)
320 3sre_A PON1, serum paraoxonase 97.2 0.036 1.2E-06 46.0 16.6 150 162-314 53-250 (355)
321 1bpo_A Protein (clathrin); cla 97.1 0.098 3.4E-06 44.3 31.5 253 40-310 48-325 (494)
322 2woz_A Kelch repeat and BTB do 96.8 0.16 5.4E-06 41.3 18.8 220 32-275 18-288 (318)
323 3pbp_A Nucleoporin NUP82; beta 96.8 0.12 4E-06 43.8 16.3 139 168-310 30-206 (452)
324 1cru_A Protein (soluble quinop 96.7 0.24 8E-06 42.8 18.5 103 161-263 29-163 (454)
325 1xi4_A Clathrin heavy chain; a 96.6 0.6 2.1E-05 45.8 21.9 251 40-308 48-323 (1630)
326 2uvk_A YJHT; unknown function, 96.6 0.078 2.7E-06 44.0 14.6 61 32-94 22-98 (357)
327 3pbp_A Nucleoporin NUP82; beta 96.5 0.3 1E-05 41.3 19.5 162 69-270 29-208 (452)
328 3s25_A Hypothetical 7-bladed b 96.5 0.26 8.7E-06 39.9 19.0 186 81-303 36-240 (302)
329 2be1_A Serine/threonine-protei 96.2 0.04 1.4E-06 45.4 10.3 124 73-198 11-139 (339)
330 3a9g_A Putative uncharacterize 96.2 0.44 1.5E-05 39.5 28.7 234 15-262 29-330 (354)
331 3das_A Putative oxidoreductase 96.1 0.5 1.7E-05 39.0 28.9 230 62-304 33-326 (347)
332 2uvk_A YJHT; unknown function, 96.0 0.081 2.8E-06 43.9 11.6 49 180-230 168-224 (357)
333 2zwa_A Leucine carboxyl methyl 95.6 1.1 3.6E-05 41.1 17.9 192 32-235 400-638 (695)
334 2zwa_A Leucine carboxyl methyl 95.5 1.4 4.8E-05 40.2 22.0 195 70-276 396-637 (695)
335 1tl2_A L10, protein (tachylect 95.3 0.7 2.4E-05 35.3 15.7 139 161-309 43-203 (236)
336 2g8s_A Glucose/sorbosone dehyd 95.2 1.1 3.7E-05 37.1 25.6 238 15-266 18-346 (353)
337 1tl2_A L10, protein (tachylect 95.2 0.75 2.6E-05 35.2 15.9 181 70-267 2-203 (236)
338 3ott_A Two-component system se 94.8 2.5 8.5E-05 38.9 35.5 265 15-307 63-344 (758)
339 2be1_A Serine/threonine-protei 93.4 2.8 9.5E-05 34.4 19.2 113 31-144 11-140 (339)
340 3qhy_B Beta-lactamase inhibito 92.8 3 0.0001 33.2 19.3 219 62-313 25-243 (282)
341 3sbq_A Nitrous-oxide reductase 92.6 2.3 7.9E-05 37.4 12.3 87 103-190 323-409 (638)
342 2xzh_A Clathrin heavy chain 1; 92.4 3.9 0.00013 33.4 28.2 225 32-275 80-333 (365)
343 1cru_A Protein (soluble quinop 92.3 4.9 0.00017 34.5 23.1 119 96-221 20-163 (454)
344 3sbq_A Nitrous-oxide reductase 91.4 7.1 0.00024 34.5 22.4 68 246-314 325-406 (638)
345 3das_A Putative oxidoreductase 91.0 5.8 0.0002 32.6 29.4 232 15-261 32-325 (347)
346 1xi4_A Clathrin heavy chain; a 89.8 17 0.00058 36.2 19.0 187 32-238 79-295 (1630)
347 1bpo_A Protein (clathrin); cla 88.9 10 0.00035 32.4 28.1 224 32-274 79-331 (494)
348 3qhy_B Beta-lactamase inhibito 87.9 8.8 0.0003 30.5 21.5 240 15-296 24-264 (282)
349 3b7f_A Glycosyl hydrolase, BNR 87.5 11 0.00039 31.3 27.3 274 30-310 22-366 (394)
350 3s25_A Hypothetical 7-bladed b 87.2 10 0.00035 30.4 23.6 176 67-274 59-255 (302)
351 2wg3_C Hedgehog-interacting pr 86.6 14 0.00049 31.7 12.8 106 202-307 15-160 (463)
352 4gq2_M Nucleoporin NUP120; bet 85.8 25 0.00085 33.5 15.4 36 245-280 237-272 (950)
353 3q6k_A 43.2 kDa salivary prote 84.5 17 0.00057 30.4 23.6 200 62-261 88-341 (381)
354 3ott_A Two-component system se 83.7 27 0.00091 32.1 35.4 263 14-303 21-296 (758)
355 4gq2_M Nucleoporin NUP120; bet 73.8 5.6 0.00019 37.8 6.2 38 62-99 237-274 (950)
356 4fhn_B Nucleoporin NUP120; pro 63.4 5.9 0.0002 38.6 4.1 38 63-100 240-277 (1139)
357 3f7f_A Nucleoporin NUP120; nuc 62.5 17 0.00057 33.2 6.5 36 63-100 224-259 (729)
358 3f7f_A Nucleoporin NUP120; nuc 61.4 19 0.00066 32.8 6.6 27 254-280 230-256 (729)
359 4fhn_B Nucleoporin NUP120; pro 59.8 37 0.0013 33.0 8.9 36 161-196 240-275 (1139)
360 3q6k_A 43.2 kDa salivary prote 59.0 78 0.0027 26.4 26.2 193 104-303 88-341 (381)
361 4a9v_A PHOX; hydrolase, beta-p 57.4 45 0.0016 29.5 8.1 60 244-303 476-548 (592)
362 3zwu_A Alkaline phosphatase PH 53.9 39 0.0013 30.1 7.3 58 246-303 478-548 (592)
363 3no0_A DNA gyrase subunit A; D 53.4 80 0.0027 24.8 16.9 150 161-314 26-194 (276)
364 3b7f_A Glycosyl hydrolase, BNR 51.3 1E+02 0.0035 25.4 26.9 141 160-303 116-296 (394)
365 3zwu_A Alkaline phosphatase PH 49.7 81 0.0028 28.1 8.6 60 105-176 478-548 (592)
366 4a9v_A PHOX; hydrolase, beta-p 47.6 1.5E+02 0.0051 26.4 9.7 61 61-121 476-549 (592)
367 1sqj_A OXG-RCBH, oligoxylogluc 40.2 2.3E+02 0.0078 26.2 22.5 157 102-267 14-194 (789)
368 2cn3_A Xyloglucanase, beta-1,4 36.8 2.5E+02 0.0085 25.7 16.5 60 160-220 24-91 (737)
369 3mez_B Mannose-specific lectin 36.5 89 0.0031 20.5 9.1 25 248-274 60-84 (113)
370 1sqj_A OXG-RCBH, oligoxylogluc 26.5 3.8E+02 0.013 24.7 25.5 156 61-222 15-190 (789)
371 1zi0_A DNA gyrase subunit A; b 26.0 2.5E+02 0.0085 22.3 25.7 143 169-313 108-274 (307)
372 3uc1_A DNA gyrase subunit A; D 25.4 2.7E+02 0.0091 22.5 18.9 160 154-315 37-227 (327)
373 1suu_A DNA gyrase subunit A; t 22.7 2.9E+02 0.01 22.0 23.3 191 117-314 10-229 (312)
374 3mez_A Mannose-specific lectin 22.5 1.7E+02 0.0057 19.1 6.5 23 248-271 53-75 (111)
375 2wg3_C Hedgehog-interacting pr 21.9 3.7E+02 0.013 22.9 29.7 104 15-121 14-157 (463)
376 4gz8_A Semaphorin-3A; multi-do 21.5 3.3E+02 0.011 24.7 7.8 56 215-270 431-496 (667)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-54 Score=363.26 Aligned_cols=292 Identities=40% Similarity=0.768 Sum_probs=262.1
Q ss_pred hhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcc--eeeccccccceEEEEeCCCCCEEEEeeCCCeEEE
Q 021247 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQL--ERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRV 86 (315)
Q Consensus 9 ~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~--~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~ 86 (315)
...+|++.|++|+|+|.......+|+|||.|++|++|+....+. ...+.+|..+|.++.+++++.++++++.|++|++
T Consensus 27 ~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~l 106 (321)
T 3ow8_A 27 QEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRL 106 (321)
T ss_dssp ETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred ecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEE
Confidence 35699999999999986543446899999999999999865543 4457899999999999999999999999999999
Q ss_pred EECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEE
Q 021247 87 FDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW 166 (315)
Q Consensus 87 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 166 (315)
||+.+++.+..+..+...+..++|+|+++.+ ++++.++.|++||+++++....+.. +...+.+++|
T Consensus 107 Wd~~~~~~~~~~~~~~~~~~~~~~spdg~~l-~~g~~dg~v~i~~~~~~~~~~~~~~-------------~~~~v~~~~~ 172 (321)
T 3ow8_A 107 WDLENGKQIKSIDAGPVDAWTLAFSPDSQYL-ATGTHVGKVNIFGVESGKKEYSLDT-------------RGKFILSIAY 172 (321)
T ss_dssp EETTTTEEEEEEECCTTCCCCEEECTTSSEE-EEECTTSEEEEEETTTCSEEEEEEC-------------SSSCEEEEEE
T ss_pred EECCCCCEEEEEeCCCccEEEEEECCCCCEE-EEEcCCCcEEEEEcCCCceeEEecC-------------CCceEEEEEE
Confidence 9999999999998888899999999999865 6788999999999998776655532 2345899999
Q ss_pred CCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccE
Q 021247 167 SPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWV 246 (315)
Q Consensus 167 ~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i 246 (315)
+|++++|++|+.|+.|++||+++++.+..+.+|..+|.+++|+| ++++|++++.|+.|++||++.+..+..+.+|...|
T Consensus 173 spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v 251 (321)
T 3ow8_A 173 SPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWV 251 (321)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECT-TSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcC-CCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCce
Confidence 99999999999999999999999999999999999999999999 67899999999999999999999999999999999
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeecC
Q 021247 247 LSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 247 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
.+++|+|++++|++++.|++|++||+++++.+.++.+|.+.|++++|+|++++|++++.|++|+|||..
T Consensus 252 ~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 252 LNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999963
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-53 Score=368.52 Aligned_cols=288 Identities=25% Similarity=0.417 Sum_probs=267.8
Q ss_pred hhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEE
Q 021247 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFD 88 (315)
Q Consensus 9 ~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~ 88 (315)
.+.+|.++|++++|+|... +|++|+.||+|++||..+.+..+.+.+|...|.+++|+|+|.++++|+.|++|++||
T Consensus 103 ~l~gh~~~V~~~~~~p~~~----~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd 178 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPVFS----VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178 (410)
T ss_dssp EEECCSSCEEEEEECSSSS----EEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEE
T ss_pred eecccCCcEEEEEEcCCCC----EEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 3568999999999999765 799999999999999999998899999999999999999999999999999999999
Q ss_pred CCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECC
Q 021247 89 VDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP 168 (315)
Q Consensus 89 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 168 (315)
+.+++++..+..|...|.+++|+|++..+ ++++.|++|++||+++++.+..+. .|...|.++.++|
T Consensus 179 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~l-~s~s~D~~i~~wd~~~~~~~~~~~-------------~h~~~v~~~~~~~ 244 (410)
T 1vyh_C 179 FQGFECIRTMHGHDHNVSSVSIMPNGDHI-VSASRDKTIKMWEVQTGYCVKTFT-------------GHREWVRMVRPNQ 244 (410)
T ss_dssp TTSSCEEECCCCCSSCEEEEEECSSSSEE-EEEETTSEEEEEETTTCCEEEEEE-------------CCSSCEEEEEECT
T ss_pred CCCCceeEEEcCCCCCEEEEEEeCCCCEE-EEEeCCCeEEEEECCCCcEEEEEe-------------CCCccEEEEEECC
Confidence 99999999999999999999999998855 688899999999999888776663 2445699999999
Q ss_pred CCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCC-------------------CcEEEEEeCCCeEEEEe
Q 021247 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD-------------------PRVLFSASDDTHVHMYD 229 (315)
Q Consensus 169 ~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~-------------------~~~l~s~~~d~~i~~wd 229 (315)
++++|++|+.|+.|++||+.+++....+.+|...|.++.|+|.. +.++++|+.|+.|++||
T Consensus 245 ~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd 324 (410)
T 1vyh_C 245 DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324 (410)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEE
Confidence 99999999999999999999999999999999999999999842 56899999999999999
Q ss_pred CCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcE
Q 021247 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSI 309 (315)
Q Consensus 230 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i 309 (315)
++.+..+..+.+|..+|.+++|+|++++|++|+.|++|++||+..++.+.++.+|...|++++|+|++.+|++++.|++|
T Consensus 325 ~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i 404 (410)
T 1vyh_C 325 VSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTV 404 (410)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEE
T ss_pred CCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 99999999999999999999999999999999999999999999999899999999999999999999999999999999
Q ss_pred EEeec
Q 021247 310 SLYEY 314 (315)
Q Consensus 310 ~i~~~ 314 (315)
+||+.
T Consensus 405 ~vW~~ 409 (410)
T 1vyh_C 405 KVWEC 409 (410)
T ss_dssp EEEC-
T ss_pred EEEeC
Confidence 99986
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.4e-51 Score=346.20 Aligned_cols=286 Identities=20% Similarity=0.324 Sum_probs=257.8
Q ss_pred hhhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEE
Q 021247 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVF 87 (315)
Q Consensus 8 ~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w 87 (315)
..+.+|.+.|++++|+|++. +|++|+.||+|++||..+.+....+..|...|.+++|+|+|.++++++.|+.|++|
T Consensus 49 ~~l~gH~~~v~~~~~s~d~~----~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 49 RTLRGHLAKIYAMHWGTDSR----LLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp EEECCCSSCEEEEEECTTSS----EEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred eeecCCCCceEEEEECCCCC----EEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 44679999999999999765 79999999999999998888888888999999999999999999999999999999
Q ss_pred ECCCCc----eeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEE
Q 021247 88 DVDTNA----SIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLS 163 (315)
Q Consensus 88 ~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 163 (315)
++.+.. ....+..|...|.++.|+|++. +++++.|++|++||+++++.+..+. .|...|.+
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--l~s~s~d~~i~~wd~~~~~~~~~~~-------------~h~~~v~~ 189 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ--IVTSSGDTTCALWDIETGQQTTTFT-------------GHTGDVMS 189 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEETTE--EEEEETTSCEEEEETTTTEEEEEEC-------------CCSSCEEE
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECCCCc--EEEEECCCcEEEEECCCCcEEEEEc-------------CCCCceEE
Confidence 998753 4556778999999999998764 5678899999999999888776653 24456999
Q ss_pred EEECCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEee--c
Q 021247 164 VAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS--G 241 (315)
Q Consensus 164 ~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~--~ 241 (315)
++|+|++++|++|+.|+.|++||+++++....+.+|...|.+++|+| ++.+|++++.|+.|++||++..+.+..+. .
T Consensus 190 ~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~ 268 (340)
T 1got_B 190 LSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDN 268 (340)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTT
T ss_pred EEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCcEEEEEccCC
Confidence 99999999999999999999999999999999999999999999999 67899999999999999999887766554 2
Q ss_pred ccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEee
Q 021247 242 HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313 (315)
Q Consensus 242 ~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 313 (315)
+...|.+++|+|++++|++|+.|+.|++||+..++.+..+.+|...|++++|+|+|.+|++++.|++|+|||
T Consensus 269 ~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 269 IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 345799999999999999999999999999999888889999999999999999999999999999999997
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.6e-50 Score=335.96 Aligned_cols=293 Identities=23% Similarity=0.350 Sum_probs=257.6
Q ss_pred ccchhhhhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCC
Q 021247 3 FAGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDS 82 (315)
Q Consensus 3 ~~~~~~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~ 82 (315)
+..+.....+|.+.|++++|+|.++ +|++|+.||+|++||..+.+..+.+.+|..+|.++.|+|+++++++++.|+
T Consensus 2 ~l~~~~~~~~h~~~V~~~~fsp~~~----~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~ 77 (304)
T 2ynn_A 2 KLDIKKTFSNRSDRVKGIDFHPTEP----WVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF 77 (304)
T ss_dssp CCCCEEEEEEECSCEEEEEECSSSS----EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS
T ss_pred cceeEEeecCCCCceEEEEECCCCC----EEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCC
Confidence 3456667889999999999999875 799999999999999999888888889999999999999999999999999
Q ss_pred eEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCccee-eeecCCCCCCCCCCccCCCCcce
Q 021247 83 FVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLI-ATLSIPRPEGLKPTDKSSSKKFV 161 (315)
Q Consensus 83 ~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i 161 (315)
+|++||+.+++.+..+..|...|.+++|+|+++. +++|+.|++|++||+++.... ..+ ..|...|
T Consensus 78 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~sgs~D~~v~lWd~~~~~~~~~~~-------------~~h~~~v 143 (304)
T 2ynn_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWALEQTF-------------EGHEHFV 143 (304)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEEGGGTTEEEEEE-------------CCCCSCE
T ss_pred EEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCE-EEEECCCCeEEEEECCCCcchhhhh-------------cccCCcE
Confidence 9999999999999999999999999999999885 468899999999999875333 222 2355669
Q ss_pred EEEEECC-CCCEEEEecCCCcEEEEEcccceeeeeec-CCccceEEEEEcCC-CCcEEEEEeCCCeEEEEeCCCCeeEEE
Q 021247 162 LSVAWSP-DGRRIACGSMDGTISVFDVTRAKFLHHLE-GHFMPVRSLVYSPV-DPRVLFSASDDTHVHMYDAEGKSLVTA 238 (315)
Q Consensus 162 ~~~~~~~-~~~~l~~~s~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~ 238 (315)
.+++|+| ++..|++|+.|+.|++||+++......+. +|...+..+.|+|. ++.+|++++.|+.|++||+++++.+..
T Consensus 144 ~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~ 223 (304)
T 2ynn_A 144 MCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT 223 (304)
T ss_dssp EEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcccee
Confidence 9999999 67899999999999999998776655543 56678999999874 567999999999999999999999999
Q ss_pred eecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCC--EEEEEeCCCcEEEeec
Q 021247 239 MSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGG--RVVSVSDDKSISLYEY 314 (315)
Q Consensus 239 ~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~s~~~d~~i~i~~~ 314 (315)
+.+|...|.+++|+|++++|++|+.||+|++||+++++..+++..|.+.+++++|+|++. +++++++|| +.+|++
T Consensus 224 ~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~ 300 (304)
T 2ynn_A 224 LEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSL 300 (304)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEEC
T ss_pred eCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEe
Confidence 999999999999999999999999999999999999999999999999999999999886 466666555 556654
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=7.8e-50 Score=338.65 Aligned_cols=287 Identities=23% Similarity=0.348 Sum_probs=255.7
Q ss_pred hhhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEE
Q 021247 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVF 87 (315)
Q Consensus 8 ~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w 87 (315)
..+.+|.+.|++++|+|++. +|+|||.||+|++||..+.+....+..|...|.+++|+|+|.++++++.|+.+++|
T Consensus 58 ~~l~gH~~~V~~~~~s~d~~----~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~ 133 (354)
T 2pbi_B 58 RTLKGHGNKVLCMDWCKDKR----RIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVY 133 (354)
T ss_dssp EEEECCSSCEEEEEECTTSS----EEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEE
T ss_pred EEecCCCCeEEEEEECCCCC----EEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEE
Confidence 34679999999999999764 79999999999999998888777788888999999999999999999999999999
Q ss_pred ECCCC------ceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcce
Q 021247 88 DVDTN------ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFV 161 (315)
Q Consensus 88 ~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 161 (315)
++... .....+..|...|..++|+|++..+ ++++.|++|++||+++++.+..+.. |...|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~t~s~D~~v~lwd~~~~~~~~~~~~-------------h~~~v 199 (354)
T 2pbi_B 134 PLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQI-LTASGDGTCALWDVESGQLLQSFHG-------------HGADV 199 (354)
T ss_dssp ECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEE-EEEETTSEEEEEETTTCCEEEEEEC-------------CSSCE
T ss_pred EEeccccccccccceeeeccCCcEEEEEEeCCCCEE-EEEeCCCcEEEEeCCCCeEEEEEcC-------------CCCCe
Confidence 98653 2345667789999999999998865 6788999999999999887776642 34458
Q ss_pred EEEEECC--CCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEe
Q 021247 162 LSVAWSP--DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAM 239 (315)
Q Consensus 162 ~~~~~~~--~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 239 (315)
.+++|+| ++++|++|+.|+.|++||+++++.+..+.+|...|.+++|+| ++.+|++++.|++|++||++....+..+
T Consensus 200 ~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~~~~~ 278 (354)
T 2pbi_B 200 LCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIY 278 (354)
T ss_dssp EEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 8999987 578999999999999999999999999999999999999999 6679999999999999999988776655
Q ss_pred ecc--cccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEee
Q 021247 240 SGH--ASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313 (315)
Q Consensus 240 ~~~--~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 313 (315)
..+ ...+.+++|+|++++|++|+.|++|++||+..++.+..+.+|...|++++|+|+|++|++++.|++|+||+
T Consensus 279 ~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 279 SKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred cCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 533 35789999999999999999999999999999988888999999999999999999999999999999996
No 6
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.8e-51 Score=352.08 Aligned_cols=295 Identities=22% Similarity=0.366 Sum_probs=257.0
Q ss_pred hhhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEE
Q 021247 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVF 87 (315)
Q Consensus 8 ~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w 87 (315)
..+.+|+++|++++|+|.++ +|+|||.|++|++||..+.+....+.+|...|.+++|+|+|.++++++.|+.+++|
T Consensus 60 ~~l~gH~~~V~~~~~sp~~~----~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 60 RTLQGHSGKVYSLDWTPEKN----WIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIF 135 (380)
T ss_dssp EEECCCSSCEEEEEECTTSS----CEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEE
T ss_pred ecccccccEEEEEEEcCCCC----EEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEE
Confidence 34679999999999999765 69999999999999999888888889999999999999999999999999999999
Q ss_pred ECCCCc-------eeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcc
Q 021247 88 DVDTNA-------SIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKF 160 (315)
Q Consensus 88 ~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (315)
++.+.. ....+..|...+..+.|.|++...+++|+.|++|++||+++++.+..+....+ ..|...
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~--------~~h~~~ 207 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFP--------SGHTAD 207 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSS--------SSCCSC
T ss_pred ECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccC--------CCCccC
Confidence 997532 23456778889999999998766678999999999999999887766532211 245667
Q ss_pred eEEEEECC-CCCEEEEecCCCcEEEEEcc-cceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEE
Q 021247 161 VLSVAWSP-DGRRIACGSMDGTISVFDVT-RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTA 238 (315)
Q Consensus 161 i~~~~~~~-~~~~l~~~s~dg~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~ 238 (315)
+.+++|++ ++++|++|+.|+.|++||++ ..+.+..+.+|...|.+++|+| ++++|++++.|++|++||++++..+..
T Consensus 208 v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 208 VLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQLQV 286 (380)
T ss_dssp EEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECT-TSSEEEEECSSSCEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcEEEE
Confidence 99999987 78899999999999999997 4567788899999999999999 678999999999999999999888776
Q ss_pred eeccc-------ccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcc----cccccceEEEEEeeCCCEEEEEeCCC
Q 021247 239 MSGHA-------SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSM----TNHTDQVWGVSFRPLGGRVVSVSDDK 307 (315)
Q Consensus 239 ~~~~~-------~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~s~~~d~ 307 (315)
+..+. ..+.+++|+|++++|++|+.||.|++||+..++....+ .+|.+.|++++|+|+|.+|++++.|+
T Consensus 287 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~ 366 (380)
T 3iz6_a 287 YNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK 366 (380)
T ss_dssp ECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS
T ss_pred ecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC
Confidence 65432 34889999999999999999999999999887766554 67999999999999999999999999
Q ss_pred cEEEeecC
Q 021247 308 SISLYEYS 315 (315)
Q Consensus 308 ~i~i~~~~ 315 (315)
+|+||+++
T Consensus 367 ~i~iW~~~ 374 (380)
T 3iz6_a 367 NLKIWAFS 374 (380)
T ss_dssp CEEEEECC
T ss_pred CEEEEecC
Confidence 99999974
No 7
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.4e-49 Score=328.09 Aligned_cols=290 Identities=20% Similarity=0.319 Sum_probs=249.3
Q ss_pred cchhhhhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCC-----cceeeccccccceEEEEeCCCCCEEEEe
Q 021247 4 AGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDM-----QLERTNTGHCLGVVSVAAHPSGIIAASA 78 (315)
Q Consensus 4 ~~~~~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~-----~~~~~~~~h~~~v~~~~~~~~g~~l~s~ 78 (315)
..+...+.+|++.|++++|+|... .+|+|||.|++|++|+.... ...+.+.+|...|.+++|+|+|.+++++
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~---~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~ 83 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQP---NLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSA 83 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCT---TEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred EEEEEEEccccceEEEEEccCCCc---cEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEE
Confidence 445566789999999999998653 38999999999999987532 2345678999999999999999999999
Q ss_pred eCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCC
Q 021247 79 SLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSK 158 (315)
Q Consensus 79 ~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (315)
+.|++|++||+.+++.+..+..|...|.+++|+|++.. +++++.|++|++||++. +.+..+ ..|.
T Consensus 84 s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~s~D~~i~vwd~~~-~~~~~~-------------~~h~ 148 (319)
T 3frx_A 84 SWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASM-IISGSRDKTIKVWTIKG-QCLATL-------------LGHN 148 (319)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCE-EEEEETTSCEEEEETTS-CEEEEE-------------CCCS
T ss_pred eCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCE-EEEEeCCCeEEEEECCC-CeEEEE-------------eccC
Confidence 99999999999999999999999999999999999875 57889999999999964 333333 2345
Q ss_pred cceEEEEECCC------CCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCC
Q 021247 159 KFVLSVAWSPD------GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG 232 (315)
Q Consensus 159 ~~i~~~~~~~~------~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 232 (315)
..+.+++|.|. +..|++++.|+.|++||+++.+....+.+|..+|.+++|+| ++++|++++.|+.|++||++.
T Consensus 149 ~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp-~g~~l~s~~~dg~i~iwd~~~ 227 (319)
T 3frx_A 149 DWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASP-DGTLIASAGKDGEIMLWNLAA 227 (319)
T ss_dssp SCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECT-TSSEEEEEETTCEEEEEETTT
T ss_pred CcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCC
Confidence 56899999985 44899999999999999999999899999999999999999 678999999999999999999
Q ss_pred CeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcc--------cccccceEEEEEeeCCCEEEEEe
Q 021247 233 KSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSM--------TNHTDQVWGVSFRPLGGRVVSVS 304 (315)
Q Consensus 233 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~--------~~~~~~v~~~~~s~~~~~l~s~~ 304 (315)
++.+..+..+ ..|.+++|+|++.+|++++.+ .+++|+++....+..+ ..|...+.+++|+|+|++|++++
T Consensus 228 ~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~ 305 (319)
T 3frx_A 228 KKAMYTLSAQ-DEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY 305 (319)
T ss_dssp TEEEEEEECC-SCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE
T ss_pred CcEEEEecCC-CcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEee
Confidence 9888877754 679999999999999888755 5999999876554433 23566799999999999999999
Q ss_pred CCCcEEEeec
Q 021247 305 DDKSISLYEY 314 (315)
Q Consensus 305 ~d~~i~i~~~ 314 (315)
.|++|+|||+
T Consensus 306 ~Dg~i~vWd~ 315 (319)
T 3frx_A 306 TDNVIRVWQV 315 (319)
T ss_dssp TTSCEEEEEE
T ss_pred cCceEEEEEE
Confidence 9999999996
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=9.9e-49 Score=330.05 Aligned_cols=284 Identities=19% Similarity=0.216 Sum_probs=235.4
Q ss_pred hccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCC-----------cceeeccccccceEEEEeCCCCCEEEEee
Q 021247 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDM-----------QLERTNTGHCLGVVSVAAHPSGIIAASAS 79 (315)
Q Consensus 11 ~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~-----------~~~~~~~~h~~~v~~~~~~~~g~~l~s~~ 79 (315)
..|...|.+++|+|++. +|++++ |+++++|+.... ........|..+|.+++|+|++ .+++++
T Consensus 27 ~~~~~~v~~~~fs~dG~----~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s 100 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGA----LLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVAS 100 (344)
T ss_dssp SSCCSEEEEEEECTTSC----EEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEE
T ss_pred ccccCCEEEEEECCCCC----EEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEE
Confidence 36788899999999885 566666 778888863210 0111122356789999999986 677899
Q ss_pred CCCeEEEEECCCCceeEE----eeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccC
Q 021247 80 LDSFVRVFDVDTNASIAT----LEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKS 155 (315)
Q Consensus 80 ~d~~i~~w~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 155 (315)
.||+|++||+.+++.+.. ...|.+.|.+++|+|+++.+ ++|+.|++|++||+++++.+..+.
T Consensus 101 ~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l-~sgs~d~~i~iwd~~~~~~~~~~~------------- 166 (344)
T 4gqb_B 101 DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQA-VSGSKDICIKVWDLAQQVVLSSYR------------- 166 (344)
T ss_dssp TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTTEEEEEEC-------------
T ss_pred CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEE-EEEeCCCeEEEEECCCCcEEEEEc-------------
Confidence 999999999998875543 34788999999999998865 688999999999999988877663
Q ss_pred CCCcceEEEEECCCCC-EEEEecCCCcEEEEEcccceeeeeec--CCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCC
Q 021247 156 SSKKFVLSVAWSPDGR-RIACGSMDGTISVFDVTRAKFLHHLE--GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG 232 (315)
Q Consensus 156 ~~~~~i~~~~~~~~~~-~l~~~s~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 232 (315)
.|...|.+++|+|++. +|++++.|+.|++||+++++....+. .+...+.+++|+|.+++++++|+.|+.|++||+++
T Consensus 167 ~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~ 246 (344)
T 4gqb_B 167 AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS 246 (344)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC
T ss_pred CcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC
Confidence 3556699999999875 78899999999999999988877664 45567899999998889999999999999999999
Q ss_pred CeeEEEeecccccEEEEEEcCCC-CeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCE-EEEEeCCCcEE
Q 021247 233 KSLVTAMSGHASWVLSVDASPDG-AAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGR-VVSVSDDKSIS 310 (315)
Q Consensus 233 ~~~~~~~~~~~~~i~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~s~~~d~~i~ 310 (315)
++.+..+.+|...|++++|+|++ ++|++|+.|++|++||+++++.+ .+.+|.+.|++++|+|+++. |+++|.|++|+
T Consensus 247 ~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~ 325 (344)
T 4gqb_B 247 TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVV 325 (344)
T ss_dssp --CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEE
Confidence 99999999999999999999997 57999999999999999988765 46789999999999999875 67999999999
Q ss_pred EeecC
Q 021247 311 LYEYS 315 (315)
Q Consensus 311 i~~~~ 315 (315)
+|++.
T Consensus 326 ~w~v~ 330 (344)
T 4gqb_B 326 HHVVP 330 (344)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99873
No 9
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-48 Score=329.35 Aligned_cols=291 Identities=25% Similarity=0.403 Sum_probs=241.4
Q ss_pred hhhcccc-ceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcce---eeccccccceEEEEeCCCCCEEEEeeCCCeE
Q 021247 9 VENAHEE-SVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLE---RTNTGHCLGVVSVAAHPSGIIAASASLDSFV 84 (315)
Q Consensus 9 ~~~~h~~-~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~---~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i 84 (315)
.+.+|.+ .|++++|+|++. +|++|+.|++|++|+..+.... ....+|...|.+++|+|+|.+|++++.|+++
T Consensus 10 ~~~~h~~~~v~~l~~sp~g~----~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v 85 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWNPAGT----LLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATT 85 (345)
T ss_dssp EECCSTTSCEEEEEECTTSS----CEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eecCCCCCcEEEEEECCCCC----EEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcE
Confidence 4568988 999999999875 6999999999999998765432 2236899999999999999999999999999
Q ss_pred EEEECCCCc--eeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceE
Q 021247 85 RVFDVDTNA--SIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVL 162 (315)
Q Consensus 85 ~~w~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 162 (315)
++|++..+. ++..+..|..+|.+++|+|+++. +++++.|++|++||++..+....... ...|...|.
T Consensus 86 ~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~-l~s~s~D~~v~iwd~~~~~~~~~~~~----------~~~h~~~v~ 154 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNL-LATCSRDKSVWVWEVDEEDEYECVSV----------LNSHTQDVK 154 (345)
T ss_dssp EEEEECCC-EEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEEECTTSCEEEEEE----------ECCCCSCEE
T ss_pred EEEEccCCCeEEEEEccCCCCCceEEEEeCCCCE-EEEEECCCeEEEEECCCCCCeEEEEE----------ecCcCCCeE
Confidence 999998764 56788899999999999999885 46888999999999976543221110 123455699
Q ss_pred EEEECCCCCEEEEecCCCcEEEEEcccce--eeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCC-------
Q 021247 163 SVAWSPDGRRIACGSMDGTISVFDVTRAK--FLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGK------- 233 (315)
Q Consensus 163 ~~~~~~~~~~l~~~s~dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~------- 233 (315)
+++|+|++++|++++.|+.|++||+++++ ....+.+|...|.+++|+| ++++|++++.|++|++||....
T Consensus 155 ~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp-~g~~l~s~s~D~~v~iW~~~~~~~~~~~~ 233 (345)
T 3fm0_A 155 HVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP-SGQRLASCSDDRTVRIWRQYLPGNEQGVA 233 (345)
T ss_dssp EEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEEECTTCTTCCC
T ss_pred EEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECC-CCCEEEEEeCCCeEEEeccccCCCCccce
Confidence 99999999999999999999999998775 3467889999999999999 6789999999999999995211
Q ss_pred --------eeEEEeec-ccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccce---------ehcccccccceEEEEEee
Q 021247 234 --------SLVTAMSG-HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA---------MQSMTNHTDQVWGVSFRP 295 (315)
Q Consensus 234 --------~~~~~~~~-~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~---------~~~~~~~~~~v~~~~~s~ 295 (315)
..+..+.+ |...|.+++|+|++..|++++.|+.|++|+.+.... .+...+|.+.|++++|+|
T Consensus 234 ~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p 313 (345)
T 3fm0_A 234 CSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNP 313 (345)
T ss_dssp CC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECS
T ss_pred eeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeC
Confidence 22334444 888999999999999999999999999999875421 122357899999999999
Q ss_pred CC-CEEEEEeCCCcEEEeecC
Q 021247 296 LG-GRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 296 ~~-~~l~s~~~d~~i~i~~~~ 315 (315)
++ .+|++++.||+|+||+..
T Consensus 314 ~~~~~laS~s~Dg~v~~W~~~ 334 (345)
T 3fm0_A 314 KEPGLLASCSDDGEVAFWKYQ 334 (345)
T ss_dssp SSTTEEEEEETTSCEEEEEEC
T ss_pred CCceEEEEcCCCCcEEEEEec
Confidence 98 489999999999999963
No 10
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1e-47 Score=320.20 Aligned_cols=290 Identities=27% Similarity=0.451 Sum_probs=256.7
Q ss_pred hhhhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEE
Q 021247 7 KSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRV 86 (315)
Q Consensus 7 ~~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~ 86 (315)
...+.+|.+.|++++|+|.++ +|++|+.||.|++|+..+.+....+.+|..+|.+++|+|++.+|++++.|+.|++
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~----~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGE----WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSS----EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEEEcccCCcEEEEEECCCCC----EEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence 334579999999999999765 7999999999999999888888888999999999999999999999999999999
Q ss_pred EECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEE
Q 021247 87 FDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW 166 (315)
Q Consensus 87 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 166 (315)
||+.+++.+..+..|...|.+++|+|+++.+ ++++.|++|++||+++++.+..+.. +...|.+++|
T Consensus 92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~-------------~~~~v~~~~~ 157 (312)
T 4ery_A 92 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI-VSGSFDESVRIWDVKTGKCLKTLPA-------------HSDPVSAVHF 157 (312)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEE-EEEETTSCEEEEETTTCCEEEEECC-------------CSSCEEEEEE
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEE-EEEeCCCcEEEEECCCCEEEEEecC-------------CCCcEEEEEE
Confidence 9999999999999999999999999998854 6788999999999998877765532 3445999999
Q ss_pred CCCCCEEEEecCCCcEEEEEcccceeeeeec-CCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeeccccc
Q 021247 167 SPDGRRIACGSMDGTISVFDVTRAKFLHHLE-GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASW 245 (315)
Q Consensus 167 ~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~ 245 (315)
+|++++|++++.|+.|++||+++++.+..+. .+..++..++|+| +++++++++.|+.|++||++.++.+..+.+|...
T Consensus 158 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 236 (312)
T 4ery_A 158 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNE 236 (312)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECT-TSSEEEEEETTTEEEEEETTTTEEEEEECSSCCS
T ss_pred cCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCc
Confidence 9999999999999999999999888776654 4667899999998 6789999999999999999999988888887654
Q ss_pred EE--EEEE-cCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEe--CCCcEEEeecC
Q 021247 246 VL--SVDA-SPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVS--DDKSISLYEYS 315 (315)
Q Consensus 246 i~--~~~~-~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~d~~i~i~~~~ 315 (315)
+. ...+ .+++.+|++|+.||.|++||+..++.+..+.+|.+.|.+++|+|+++.|++++ .|++|++|+.+
T Consensus 237 ~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 237 KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred eEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 32 2233 46788999999999999999999999999999999999999999999999987 69999999864
No 11
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-48 Score=326.34 Aligned_cols=294 Identities=22% Similarity=0.271 Sum_probs=233.7
Q ss_pred CcccchhhhhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCC--cceeec-cc-cccceEEEEeCCCCCEEE
Q 021247 1 MKFAGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDM--QLERTN-TG-HCLGVVSVAAHPSGIIAA 76 (315)
Q Consensus 1 ~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~--~~~~~~-~~-h~~~v~~~~~~~~g~~l~ 76 (315)
|....+...+.+|+++|++++|+|. +|++|+.|++|++|+.... +....+ .+ |..+|.+++|+|++.+|+
T Consensus 1 ~~~~~~~~~~~~h~~~v~~~~~s~~------~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~la 74 (330)
T 2hes_X 1 MASINLIKSLKLYKEKIWSFDFSQG------ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLA 74 (330)
T ss_dssp --CCEEEEEEECCSSCEEEEEEETT------EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEE
T ss_pred CcccccceeeccCCCceeeeccCCC------EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEE
Confidence 4455566677899999999999873 7999999999999998764 333334 34 999999999999999999
Q ss_pred EeeCCCeEEEEECCC-------CceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCc----ceeeeecCCC
Q 021247 77 SASLDSFVRVFDVDT-------NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATW----NLIATLSIPR 145 (315)
Q Consensus 77 s~~~d~~i~~w~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~----~~~~~~~~~~ 145 (315)
+++.|++|++||+.. ...+..+..|...|.+++|+|+++++ ++++.|++|++||++.. +.+..+
T Consensus 75 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l-as~s~D~~v~iwd~~~~~~~~~~~~~~---- 149 (330)
T 2hes_X 75 AGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYL-ATCSRDKSVWIWETDESGEEYECISVL---- 149 (330)
T ss_dssp EEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEE-EEEETTSCEEEEECCTTCCCCEEEEEE----
T ss_pred EEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEE-EEEeCCCEEEEEeccCCCCCeEEEEEe----
Confidence 999999999999853 24566788899999999999998854 68889999999999532 222222
Q ss_pred CCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccc--eeeeeecCCccceEEEEEcCCC-CcEEEEEeCC
Q 021247 146 PEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRA--KFLHHLEGHFMPVRSLVYSPVD-PRVLFSASDD 222 (315)
Q Consensus 146 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~d 222 (315)
..|...|.+++|+|++++|++++.|+.|++||+.++ +.+..+.+|...|.+++|+|.+ +.+|++++.|
T Consensus 150 ---------~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D 220 (330)
T 2hes_X 150 ---------QEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD 220 (330)
T ss_dssp ---------CCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT
T ss_pred ---------ccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC
Confidence 235566999999999999999999999999998766 5677889999999999999953 5689999999
Q ss_pred CeEEEEeCCCC--------eeEEEeec-ccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccc--ee-hccccccc-ceE
Q 021247 223 THVHMYDAEGK--------SLVTAMSG-HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRA--AM-QSMTNHTD-QVW 289 (315)
Q Consensus 223 ~~i~~wd~~~~--------~~~~~~~~-~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--~~-~~~~~~~~-~v~ 289 (315)
++|++||++.. .....+.+ |...|.+++|++++ +|++++.||.|++|+...++ .. ....+|.. .|+
T Consensus 221 ~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~ 299 (330)
T 2hes_X 221 STVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEIN 299 (330)
T ss_dssp SCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEE
T ss_pred CeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEE
Confidence 99999998643 23344444 89999999999765 79999999999999987653 23 22356776 899
Q ss_pred EEEEee--CCCEEEEEeCCCcEEEeecC
Q 021247 290 GVSFRP--LGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 290 ~~~~s~--~~~~l~s~~~d~~i~i~~~~ 315 (315)
+++|+| ++++|++++.||+|+||++.
T Consensus 300 ~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 300 VVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp EEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred EEEEecCCCceEEEEecCCCcEEEEEec
Confidence 999999 68899999999999999963
No 12
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6.2e-48 Score=331.61 Aligned_cols=282 Identities=28% Similarity=0.468 Sum_probs=246.4
Q ss_pred ccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccc------------------cceEEEEeCCCCC
Q 021247 12 AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHC------------------LGVVSVAAHPSGI 73 (315)
Q Consensus 12 ~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~------------------~~v~~~~~~~~g~ 73 (315)
.|...|++++|+|+++ +|++|+ |+.+++|+..+++....+..|. ..|.+++|+|+|.
T Consensus 62 ~h~~~V~~v~fspdg~----~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~ 136 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGE----YLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK 136 (393)
T ss_dssp ECSSCCCEEEECTTSS----EEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSS
T ss_pred CCCCEEEEEEECCCCC----EEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCC
Confidence 6999999999999875 688766 7899999998877766554443 2489999999999
Q ss_pred EEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCc
Q 021247 74 IAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTD 153 (315)
Q Consensus 74 ~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 153 (315)
+|++++.|++|++||+.+++.+..+..|...|.+++|+|++..+ ++++.|++|++||+++++....+..
T Consensus 137 ~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l-~s~s~d~~v~iwd~~~~~~~~~~~~---------- 205 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKL-VSGSGDRTVRIWDLRTGQCSLTLSI---------- 205 (393)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTTEEEEEEEC----------
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEE-EEecCCCcEEEEECCCCeeEEEEEc----------
Confidence 99999999999999999999999999999999999999998865 6788999999999998877665532
Q ss_pred cCCCCcceEEEEECC-CCCEEEEecCCCcEEEEEcccceeeeee-------cCCccceEEEEEcCCCCcEEEEEeCCCeE
Q 021247 154 KSSSKKFVLSVAWSP-DGRRIACGSMDGTISVFDVTRAKFLHHL-------EGHFMPVRSLVYSPVDPRVLFSASDDTHV 225 (315)
Q Consensus 154 ~~~~~~~i~~~~~~~-~~~~l~~~s~dg~i~i~d~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~l~s~~~d~~i 225 (315)
...+.+++|+| ++++|++|+.|+.|++||+++++.+..+ .+|...|.+++|+| ++++|++++.|+.|
T Consensus 206 ----~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~d~~v 280 (393)
T 1erj_A 206 ----EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSV 280 (393)
T ss_dssp ----SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT-TSSEEEEEETTSEE
T ss_pred ----CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC-CCCEEEEEeCCCEE
Confidence 22388999999 8999999999999999999988877665 57899999999998 67899999999999
Q ss_pred EEEeCCCC------------eeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEE
Q 021247 226 HMYDAEGK------------SLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSF 293 (315)
Q Consensus 226 ~~wd~~~~------------~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 293 (315)
++||++.. .....+.+|...|.+++++|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|
T Consensus 281 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~ 360 (393)
T 1erj_A 281 KLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAV 360 (393)
T ss_dssp EEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred EEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEe
Confidence 99998753 234567789999999999999999999999999999999999999999999999999999
Q ss_pred ee------CCCEEEEEeCCCcEEEeec
Q 021247 294 RP------LGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 294 s~------~~~~l~s~~~d~~i~i~~~ 314 (315)
+| ++++|++++.||+|+||++
T Consensus 361 ~~~~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 361 ANGSSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp CSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred cCCcCcCCCCCEEEEECCCCcEEECcc
Confidence 86 6789999999999999996
No 13
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=9.8e-49 Score=332.20 Aligned_cols=285 Identities=19% Similarity=0.211 Sum_probs=237.0
Q ss_pred hccccceEEEEEeecCCCCCcEEEEeeC------CCcEEEEcCCCCcc----eeeccccccceEEEEeCCCCCEEEEeeC
Q 021247 11 NAHEESVWAVTWVPATETRPALLLTGSL------DETVKLWRPDDMQL----ERTNTGHCLGVVSVAAHPSGIIAASASL 80 (315)
Q Consensus 11 ~~h~~~v~~v~~~~~~~~~~~~l~sgs~------d~~v~~w~~~~~~~----~~~~~~h~~~v~~~~~~~~g~~l~s~~~ 80 (315)
.+|+..|++|+|+|++. +|++||. |+.|++|+..+... .....+|..+|.+++|+|++.++ +++.
T Consensus 39 ~~H~~~V~~v~fSpDG~----~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~ 113 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGA----LLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VASD 113 (357)
T ss_dssp -CCCSEEEEEEECSSSC----EEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEET
T ss_pred ccccCCEEEEEECCCCC----EEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEEC
Confidence 47999999999999886 7999997 78899998765432 22335688899999999998655 5788
Q ss_pred CCeEEEEECCCCceeE----EeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCC
Q 021247 81 DSFVRVFDVDTNASIA----TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156 (315)
Q Consensus 81 d~~i~~w~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (315)
|++|++||+.+++... ....|...|.+++|+|+++.+ ++++.|++|++||+++++.+..+. .
T Consensus 114 dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l-~sgs~dg~v~iwd~~~~~~~~~~~-------------~ 179 (357)
T 4g56_B 114 SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQA-VSGGKDFSVKVWDLSQKAVLKSYN-------------A 179 (357)
T ss_dssp TSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEE-EEEETTSCEEEEETTTTEEEEEEC-------------C
T ss_pred CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEE-EEEeCCCeEEEEECCCCcEEEEEc-------------C
Confidence 9999999998876432 334678899999999998865 678899999999999988777663 2
Q ss_pred CCcceEEEEECCCCC-EEEEecCCCcEEEEEcccceeeeee--cCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCC
Q 021247 157 SKKFVLSVAWSPDGR-RIACGSMDGTISVFDVTRAKFLHHL--EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGK 233 (315)
Q Consensus 157 ~~~~i~~~~~~~~~~-~l~~~s~dg~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~ 233 (315)
|...|.+++|+|++. ++++++.|+.|++||+++++....+ ..|...+.+++|+|.++.+|++|+.|+.|++||++.+
T Consensus 180 h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~ 259 (357)
T 4g56_B 180 HSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP 259 (357)
T ss_dssp CSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG
T ss_pred CCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCC
Confidence 445699999999875 7889999999999999988776554 3567789999999988889999999999999999999
Q ss_pred eeEEEeecccccEEEEEEcCCC-CeEEEEeCCCcEEEEecCccceehcccccccceEEEEEee-CCCEEEEEeCCCcEEE
Q 021247 234 SLVTAMSGHASWVLSVDASPDG-AAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRP-LGGRVVSVSDDKSISL 311 (315)
Q Consensus 234 ~~~~~~~~~~~~i~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~d~~i~i 311 (315)
+.+..+.+|...|++++|+|++ ++|++|+.|++|+|||+++++.+..+ +|.+.|++++|+| ++.+|+++|.||+|++
T Consensus 260 ~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~i 338 (357)
T 4g56_B 260 DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLH 338 (357)
T ss_dssp GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEE
T ss_pred cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEE
Confidence 9999999999999999999987 58999999999999999998877654 7999999999999 7899999999999999
Q ss_pred eecC
Q 021247 312 YEYS 315 (315)
Q Consensus 312 ~~~~ 315 (315)
|++.
T Consensus 339 W~~~ 342 (357)
T 4g56_B 339 HHLP 342 (357)
T ss_dssp EECC
T ss_pred EECC
Confidence 9973
No 14
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.2e-47 Score=323.94 Aligned_cols=292 Identities=20% Similarity=0.328 Sum_probs=238.6
Q ss_pred hhhhhccccceEEEEEeecCC--CCCcEEEEeeCCCcEEEEcCCCCc-------ceeeccccccceEEEEeCCCCCEEEE
Q 021247 7 KSVENAHEESVWAVTWVPATE--TRPALLLTGSLDETVKLWRPDDMQ-------LERTNTGHCLGVVSVAAHPSGIIAAS 77 (315)
Q Consensus 7 ~~~~~~h~~~v~~v~~~~~~~--~~~~~l~sgs~d~~v~~w~~~~~~-------~~~~~~~h~~~v~~~~~~~~g~~l~s 77 (315)
..++.+|++.|++++|.+... ....+|+||+.|++|++|+....+ ....+.+|...|.+++|+|++.++++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 345789999999999933211 123489999999999999976432 34557899999999999999999999
Q ss_pred eeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCC
Q 021247 78 ASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSS 157 (315)
Q Consensus 78 ~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (315)
++.|++|++||+.+++.+..+..|...|.+++|+|+++.+ ++++.|++|++||+.... ..... ....+
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l-~s~~~d~~i~~wd~~~~~-~~~~~----------~~~~~ 161 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQI-LSAGAEREIKLWNILGEC-KFSSA----------EKENH 161 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEE-EEEETTSCEEEEESSSCE-EEECC----------TTTSC
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEE-EEEcCCCEEEEEeccCCc-eeeee----------cccCC
Confidence 9999999999999999999999999999999999999865 678899999999997422 21111 11235
Q ss_pred CcceEEEEECCCC----------CEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEE
Q 021247 158 KKFVLSVAWSPDG----------RRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 227 (315)
Q Consensus 158 ~~~i~~~~~~~~~----------~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~ 227 (315)
...|.+++|+|++ .+|++++.|+.|++||. ..+....+.+|...|.+++|+| ++++|++++.|+.|++
T Consensus 162 ~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~-~g~~l~sgs~dg~v~i 239 (343)
T 2xzm_R 162 SDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISP-NGKYIATGGKDKKLLI 239 (343)
T ss_dssp SSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECT-TSSEEEEEETTCEEEE
T ss_pred CceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECC-CCCEEEEEcCCCeEEE
Confidence 5679999999987 78999999999999994 5566777889999999999999 6789999999999999
Q ss_pred EeCCC-CeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceeh--cc-----------cccccceEEEEE
Q 021247 228 YDAEG-KSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQ--SM-----------TNHTDQVWGVSF 293 (315)
Q Consensus 228 wd~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~--~~-----------~~~~~~v~~~~~ 293 (315)
||+.. ......+ .+...|.+++|+|+++++++ +.|+.|++|++.+++... .+ .+|...+++++|
T Consensus 240 wd~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la~-~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 317 (343)
T 2xzm_R 240 WDILNLTYPQREF-DAGSTINQIAFNPKLQWVAV-GTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAW 317 (343)
T ss_dssp EESSCCSSCSEEE-ECSSCEEEEEECSSSCEEEE-EESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEE
T ss_pred EECCCCcccceee-cCCCcEEEEEECCCCCEEEE-ECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEE
Confidence 99843 3333333 34566999999999987764 568889999998765433 22 267788999999
Q ss_pred eeCCCEEEEEeCCCcEEEeec
Q 021247 294 RPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 294 s~~~~~l~s~~~d~~i~i~~~ 314 (315)
+|+|++|++++.||+|++|++
T Consensus 318 sp~g~~l~sg~~Dg~v~~w~~ 338 (343)
T 2xzm_R 318 NALGKKLFAGFTDGVIRTFSF 338 (343)
T ss_dssp CSSSCCEEEEETTSEEEEEEE
T ss_pred CCCCCeEEEecCCceEEEEEE
Confidence 999999999999999999986
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=8.1e-48 Score=348.66 Aligned_cols=301 Identities=21% Similarity=0.305 Sum_probs=250.7
Q ss_pred hhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEE
Q 021247 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFD 88 (315)
Q Consensus 9 ~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~ 88 (315)
.+.+|.+.|++++|+|... ..|++|+.|++|++|+..+.++...+.+|...|.+++|+|+|.+|++++.|++|++||
T Consensus 142 ~l~gh~~~v~~v~f~p~~~---~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd 218 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKPSRP---FRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYN 218 (611)
T ss_dssp CCCCCSSCEEEEEECSSSS---CEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eecCCCCCceEEEECCCCC---eEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEE
Confidence 3568999999999999754 2699999999999999888888888899999999999999999999999999999999
Q ss_pred CCCCceeEEee-------CCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCC-------------
Q 021247 89 VDTNASIATLE-------ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEG------------- 148 (315)
Q Consensus 89 ~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~------------- 148 (315)
+.+++.+..+. .|...|.+++|+|+++.+ ++++.|++|++||+++++.+..+.......
T Consensus 219 ~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l-~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 297 (611)
T 1nr0_A 219 GVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKI-ASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQAL 297 (611)
T ss_dssp TTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCE
T ss_pred CCCCcEeeeeccccccccccCCCEEEEEECCCCCEE-EEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEE
Confidence 99998888774 688999999999998865 688899999999999888776654321100
Q ss_pred -----------------CCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeee-c-------------
Q 021247 149 -----------------LKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHL-E------------- 197 (315)
Q Consensus 149 -----------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~-~------------- 197 (315)
........|...|.+++|+|++++|++++.|+.|++||+.+++....+ .
T Consensus 298 ~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~ 377 (611)
T 1nr0_A 298 VSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTS 377 (611)
T ss_dssp EEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECT
T ss_pred EEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECC
Confidence 000112357778999999999999999999999999998765432211 0
Q ss_pred --------------------------------------------------------------------CCccceEEEEEc
Q 021247 198 --------------------------------------------------------------------GHFMPVRSLVYS 209 (315)
Q Consensus 198 --------------------------------------------------------------------~~~~~v~~~~~~ 209 (315)
.|...+.+++|+
T Consensus 378 ~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~s 457 (611)
T 1nr0_A 378 KGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALS 457 (611)
T ss_dssp TSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEEC
T ss_pred CCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEe
Confidence 022346788899
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCCCee--EEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCc-cceehc--cccc
Q 021247 210 PVDPRVLFSASDDTHVHMYDAEGKSL--VTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM-RAAMQS--MTNH 284 (315)
Q Consensus 210 ~~~~~~l~s~~~d~~i~~wd~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~--~~~~ 284 (315)
| ++++|++|+.|+.|++||+.++.. +.. .+|...|++++|+|++++|++++.|++|++|++.. ++.... ...|
T Consensus 458 p-dg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H 535 (611)
T 1nr0_A 458 N-DKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFH 535 (611)
T ss_dssp T-TSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCC
T ss_pred C-CCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeec
Confidence 8 678999999999999999987643 233 67999999999999999999999999999999987 555443 3459
Q ss_pred ccceEEEEEeeCCCEEEEEeCCCcEEEeecC
Q 021247 285 TDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 285 ~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
...|++++|+|+|++|++++.|++|+||++.
T Consensus 536 ~~~V~~v~fspdg~~lasgs~D~~v~lW~~~ 566 (611)
T 1nr0_A 536 TAKVACVSWSPDNVRLATGSLDNSVIVWNMN 566 (611)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred ccceeEEEECCCCCEEEEEECCCcEEEEECC
Confidence 9999999999999999999999999999973
No 16
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.3e-45 Score=309.01 Aligned_cols=292 Identities=20% Similarity=0.335 Sum_probs=247.9
Q ss_pred cchhhhhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCc-----ceeeccccccceEEEEeCCCCCEEEEe
Q 021247 4 AGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQ-----LERTNTGHCLGVVSVAAHPSGIIAASA 78 (315)
Q Consensus 4 ~~~~~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~-----~~~~~~~h~~~v~~~~~~~~g~~l~s~ 78 (315)
+.+...+++|++.|++|+|+|... .+|+|||.|++|++||+...+ ..+.+.+|...|.++.|+|+|.+++++
T Consensus 28 ~~l~~tL~GH~~~V~~v~~sp~~~---~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 28 MTLRGTLKGHNGWVTQIATTPQFP---DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG 104 (340)
T ss_dssp EEEEEEECCCSSCEEEEEECTTCT---TEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred eEEEEEECCccCCEEEEEEeCCCC---CEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE
Confidence 345566889999999999999643 389999999999999976543 345578899999999999999999999
Q ss_pred eCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCC
Q 021247 79 SLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSK 158 (315)
Q Consensus 79 ~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (315)
+.|+.|++|+............+...+..+.++|.+..+ ++++.|+.+++||.......... ...+.
T Consensus 105 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~s~d~~~~~~d~~~~~~~~~~------------~~~~~ 171 (340)
T 4aow_A 105 SWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQI-VSGSRDKTIKLWNTLGVCKYTVQ------------DESHS 171 (340)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCE-EEEETTSCEEEECTTSCEEEEEC------------SSSCS
T ss_pred cccccceEEeecccceeeeecCCCCceeEEEEeecCccc-eeecCCCeEEEEEeCCCceEEEE------------ecccc
Confidence 999999999999998888888888889999999988865 67889999999998764332211 12345
Q ss_pred cceEEEEECCCC--CEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeE
Q 021247 159 KFVLSVAWSPDG--RRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLV 236 (315)
Q Consensus 159 ~~i~~~~~~~~~--~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~ 236 (315)
..+..++|++++ ..+++++.|+.|++||+++++....+.+|..+|.+++|+| ++++|++++.|+.|++||++..+.+
T Consensus 172 ~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~ 250 (340)
T 4aow_A 172 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHL 250 (340)
T ss_dssp SCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEE
T ss_pred CcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEEeccCcee
Confidence 568899998864 4678999999999999999999999999999999999998 6789999999999999999999888
Q ss_pred EEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcc---------cccccceEEEEEeeCCCEEEEEeCCC
Q 021247 237 TAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSM---------TNHTDQVWGVSFRPLGGRVVSVSDDK 307 (315)
Q Consensus 237 ~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~---------~~~~~~v~~~~~s~~~~~l~s~~~d~ 307 (315)
..+..+ ..+..+.++|++. +++++.|+.|++||++.+..+..+ ..|...|++++|+|+|++|++++.||
T Consensus 251 ~~~~~~-~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg 328 (340)
T 4aow_A 251 YTLDGG-DIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN 328 (340)
T ss_dssp EEEECS-SCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTS
T ss_pred eeecCC-ceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 777654 5799999999876 556677999999999876554332 46788999999999999999999999
Q ss_pred cEEEeec
Q 021247 308 SISLYEY 314 (315)
Q Consensus 308 ~i~i~~~ 314 (315)
+|+|||+
T Consensus 329 ~v~iW~~ 335 (340)
T 4aow_A 329 LVRVWQV 335 (340)
T ss_dssp CEEEEEE
T ss_pred EEEEEeC
Confidence 9999996
No 17
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-45 Score=313.80 Aligned_cols=298 Identities=19% Similarity=0.291 Sum_probs=258.6
Q ss_pred hhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEEC
Q 021247 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDV 89 (315)
Q Consensus 10 ~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~ 89 (315)
+.+|++.|++++|+|.++ +|++|+.||.|++|+..+.+....+.+|...|.+++|+|++.++++++.|+.|++||+
T Consensus 28 l~~h~~~v~~~~~s~~~~----~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGD----LLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp EECCSSCEEEEEECTTSC----EEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred EEEeeceEEEEEEcCCCC----EEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 579999999999999765 7999999999999999999888889999999999999999999999999999999999
Q ss_pred CCCceeEEeeCCcccEEEEEECCCCCeEEEEecCC-----CeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEE
Q 021247 90 DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGS-----ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSV 164 (315)
Q Consensus 90 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 164 (315)
.+++.+..+. +...+.+++|+|+++.++ +++.+ +.|.+||++..+....+...................+.++
T Consensus 104 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~-~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (369)
T 3zwl_B 104 SNGQCVATWK-SPVPVKRVEFSPCGNYFL-AILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA 181 (369)
T ss_dssp TTCCEEEEEE-CSSCEEEEEECTTSSEEE-EEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE
T ss_pred CCCcEEEEee-cCCCeEEEEEccCCCEEE-EecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE
Confidence 9999888887 778999999999998765 55666 9999999986544322221111111000111112269999
Q ss_pred EECCCCCEEEEecCCCcEEEEEccc-ceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeeccc
Q 021247 165 AWSPDGRRIACGSMDGTISVFDVTR-AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHA 243 (315)
Q Consensus 165 ~~~~~~~~l~~~s~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~ 243 (315)
+|+|++++|++++.||.|++||+++ .+....+..|...|.+++|+| ++.+|++++.|+.|++||++.++.+..+. +.
T Consensus 182 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~ 259 (369)
T 3zwl_B 182 GWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSP-DLTYFITSSRDTNSFLVDVSTLQVLKKYE-TD 259 (369)
T ss_dssp EECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEE-CS
T ss_pred EEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECC-CCCEEEEecCCceEEEEECCCCceeeeec-CC
Confidence 9999999999999999999999998 788888899999999999999 67899999999999999999988877776 67
Q ss_pred ccEEEEEEcCCCCeEEEEeCCC--------------cEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcE
Q 021247 244 SWVLSVDASPDGAAITTGSSDR--------------TVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSI 309 (315)
Q Consensus 244 ~~i~~~~~~~~~~~l~s~~~d~--------------~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i 309 (315)
..+..+.|+|+++++++++.++ .+++||+..++.+..+.+|...|++++|+|++++|++++.||+|
T Consensus 260 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v 339 (369)
T 3zwl_B 260 CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFI 339 (369)
T ss_dssp SCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeE
Confidence 8899999999999999999998 89999999999999999999999999999999999999999999
Q ss_pred EEeecC
Q 021247 310 SLYEYS 315 (315)
Q Consensus 310 ~i~~~~ 315 (315)
+||++.
T Consensus 340 ~iw~~~ 345 (369)
T 3zwl_B 340 RLHHFE 345 (369)
T ss_dssp EEEEEC
T ss_pred EEEECc
Confidence 999974
No 18
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.4e-46 Score=335.84 Aligned_cols=287 Identities=20% Similarity=0.324 Sum_probs=247.7
Q ss_pred hhhhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCc--ceeeccccccceEEEEeCCCCCEEEEeeCC---
Q 021247 7 KSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQ--LERTNTGHCLGVVSVAAHPSGIIAASASLD--- 81 (315)
Q Consensus 7 ~~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~--~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d--- 81 (315)
..++.+|++.|++++|+|++. +|++|+.|++|++||..+.+ +...+.+|..+|.+++|+|+|.++++++.+
T Consensus 52 ~~~~~~h~~~v~~~~~spdg~----~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~ 127 (611)
T 1nr0_A 52 TEIYTEHSHQTTVAKTSPSGY----YCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRER 127 (611)
T ss_dssp CEEECCCSSCEEEEEECTTSS----EEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSC
T ss_pred CeEecCCCCceEEEEECCCCc----EEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCc
Confidence 345679999999999999875 79999999999999986433 345677899999999999999999988865
Q ss_pred -CeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcc
Q 021247 82 -SFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKF 160 (315)
Q Consensus 82 -~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (315)
+.|++|| .+.....+..|...|.+++|+|++...+++++.|++|++||..+.+....+. .|...
T Consensus 128 ~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~-------------~H~~~ 192 (611)
T 1nr0_A 128 FGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG-------------EHTKF 192 (611)
T ss_dssp SEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC-------------CCSSC
T ss_pred eeEEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeec-------------cccCc
Confidence 3688887 4556667888999999999999988777899999999999998877665552 35567
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeec-------CCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCC
Q 021247 161 VLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLE-------GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGK 233 (315)
Q Consensus 161 i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~ 233 (315)
|.+++|+|++++|++++.|+.|++||+.+++....+. +|...|.+++|+| ++++|++++.|++|++||++++
T Consensus 193 V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s~s~D~~v~lWd~~~~ 271 (611)
T 1nr0_A 193 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASADKTIKIWNVATL 271 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTT
T ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC-CCCEEEEEeCCCeEEEEeCCCC
Confidence 9999999999999999999999999999888877763 7999999999999 6789999999999999999876
Q ss_pred eeEE-------------------------------------------EeecccccEEEEEEcCCCCeEEEEeCCCcEEEE
Q 021247 234 SLVT-------------------------------------------AMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270 (315)
Q Consensus 234 ~~~~-------------------------------------------~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iw 270 (315)
+.+. .+.+|...|.+++|+|++++|++++.|++|++|
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~W 351 (611)
T 1nr0_A 272 KVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSW 351 (611)
T ss_dssp EEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEE
Confidence 5433 334788999999999999999999999999999
Q ss_pred ecCccceehcc-cccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 271 DLNMRAAMQSM-TNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 271 d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
|+.+++....+ .+|...|.+++|++++ .+++++.|+++++|+.
T Consensus 352 d~~~~~~~~~~~~~h~~~v~~~~~s~~~-~l~s~s~d~~v~~w~~ 395 (611)
T 1nr0_A 352 DISTGISNRVFPDVHATMITGIKTTSKG-DLFTVSWDDHLKVVPA 395 (611)
T ss_dssp ETTTCCEEECSSCSCSSCEEEEEECTTS-CEEEEETTTEEEEECS
T ss_pred ECCCCceeeecccCCcceEEEEEECCCC-cEEEEEcCCceEEeec
Confidence 99988766554 5789999999999765 7999999999999985
No 19
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.8e-46 Score=320.54 Aligned_cols=298 Identities=19% Similarity=0.337 Sum_probs=257.3
Q ss_pred ccchhhhhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCc------ceeeccccccceEEEEeCCC----C
Q 021247 3 FAGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQ------LERTNTGHCLGVVSVAAHPS----G 72 (315)
Q Consensus 3 ~~~~~~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~------~~~~~~~h~~~v~~~~~~~~----g 72 (315)
+.....++.+|.+.|++++|+| .+|++|+.||.|++|+..+.+ ....+.+|..+|.++.|+|+ |
T Consensus 5 ~~~~~~~~~~h~~~i~~~~~~~------~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g 78 (397)
T 1sq9_A 5 FIATANAGKAHDADIFSVSACN------SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDA 78 (397)
T ss_dssp EEEEEEESSCSSSCEEEEEECS------SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTT
T ss_pred hhhhhhhhhhhhcCeEEEEecC------CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCC
Confidence 3455667789999999999987 279999999999999998776 66777899999999999999 9
Q ss_pred ---CEEEEeeCCCeEEEEECCCCce-----eEEeeCC-----cccEEEEEEC----CCCCeEEEEecCCCeEEEEecCC-
Q 021247 73 ---IIAASASLDSFVRVFDVDTNAS-----IATLEAS-----PSEVWQMQFD----PKGTTLAVAGGGSASVKLWDTAT- 134 (315)
Q Consensus 73 ---~~l~s~~~d~~i~~w~~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~~~~~~~~d~~i~~~d~~~- 134 (315)
.+|++++.|+.|++|++.+++. +..+..+ ...|.+++|+ |+++.++++++.|+.|++||+++
T Consensus 79 ~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 158 (397)
T 1sq9_A 79 FELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPF 158 (397)
T ss_dssp EEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESS
T ss_pred ccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcc
Confidence 9999999999999999998886 7788877 5899999999 98886357788999999999987
Q ss_pred -----cceee-----eecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecC---C--
Q 021247 135 -----WNLIA-----TLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEG---H-- 199 (315)
Q Consensus 135 -----~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~---~-- 199 (315)
.+.+. .+... ......+...|.+++|+|++ +|++++.|+.|++||+++++.+..+.. |
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~ 231 (397)
T 1sq9_A 159 ADESNSLTLNWSPTLELQGT------VESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMIN 231 (397)
T ss_dssp SSHHHHTTTCCCCEEEEEEE------ECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---C
T ss_pred ccccccceeeccCcceeeee------eccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccc
Confidence 54433 22100 00002345568999999999 999999999999999999999988888 8
Q ss_pred -ccceEEEEEcCCCCcEEEEEeCC---CeEEEEeCCCCeeEEEeec-------------ccccEEEEEEcCCCCeEEEEe
Q 021247 200 -FMPVRSLVYSPVDPRVLFSASDD---THVHMYDAEGKSLVTAMSG-------------HASWVLSVDASPDGAAITTGS 262 (315)
Q Consensus 200 -~~~v~~~~~~~~~~~~l~s~~~d---~~i~~wd~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~l~s~~ 262 (315)
..+|.+++|+| ++.+|++++.| +.|++||++.++.+..+.. |...|.+++|+|++++|++++
T Consensus 232 ~~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 310 (397)
T 1sq9_A 232 NSNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG 310 (397)
T ss_dssp CCCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE
T ss_pred cCCccceEEECC-CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe
Confidence 99999999999 67899999999 9999999999988888888 999999999999999999999
Q ss_pred CCCcEEEEecCccceehccc------cc---------------ccceEEEEEeeCC----------CEEEEEeCCCcEEE
Q 021247 263 SDRTVKLWDLNMRAAMQSMT------NH---------------TDQVWGVSFRPLG----------GRVVSVSDDKSISL 311 (315)
Q Consensus 263 ~d~~i~iwd~~~~~~~~~~~------~~---------------~~~v~~~~~s~~~----------~~l~s~~~d~~i~i 311 (315)
.|+.|++||++.++.+..+. .| ...|++++|+|++ ++|++++.||.|+|
T Consensus 311 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~i 390 (397)
T 1sq9_A 311 WDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRW 390 (397)
T ss_dssp TTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEE
T ss_pred CCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEE
Confidence 99999999999998888887 77 8999999999998 79999999999999
Q ss_pred eec
Q 021247 312 YEY 314 (315)
Q Consensus 312 ~~~ 314 (315)
|++
T Consensus 391 w~~ 393 (397)
T 1sq9_A 391 FRE 393 (397)
T ss_dssp EEE
T ss_pred EEc
Confidence 996
No 20
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.2e-45 Score=339.22 Aligned_cols=291 Identities=21% Similarity=0.332 Sum_probs=246.3
Q ss_pred hhhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCc-----ceeeccccccceEEEEeCCCCCEEEEeeCCC
Q 021247 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQ-----LERTNTGHCLGVVSVAAHPSGIIAASASLDS 82 (315)
Q Consensus 8 ~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~-----~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~ 82 (315)
..+++|++.|++|+|+|... .+|+|||.|++|++|+..... ..+.+.+|...|.+++|+|+|.+|++++.|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~---~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg 452 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNA---DIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG 452 (694)
T ss_dssp EEEECCSSCEEEEECCTTCC---SEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred hhcccCCceeEEEEecCCCC---CEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 35679999999999998643 389999999999999986532 3456789999999999999999999999999
Q ss_pred eEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceE
Q 021247 83 FVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVL 162 (315)
Q Consensus 83 ~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 162 (315)
+|++||+.++.....+..|...|.+++|+|+++.+ ++++.|++|++||........ +.. ....|...|.
T Consensus 453 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~D~~i~iwd~~~~~~~~-~~~---------~~~~h~~~v~ 521 (694)
T 3dm0_A 453 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQI-VSASRDRTIKLWNTLGECKYT-ISE---------GGEGHRDWVS 521 (694)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCE-EEEETTSCEEEECTTSCEEEE-ECS---------STTSCSSCEE
T ss_pred cEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEE-EEEeCCCEEEEEECCCCccee-ecc---------CCCCCCCcEE
Confidence 99999999999999999999999999999998865 688899999999986532221 110 1124667799
Q ss_pred EEEECCCC--CEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEee
Q 021247 163 SVAWSPDG--RRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS 240 (315)
Q Consensus 163 ~~~~~~~~--~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 240 (315)
+++|+|++ ..|++++.|+.|++||+++++....+.+|...|.+++|+| ++++|++++.|+.|++||+++++.+..+.
T Consensus 522 ~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~~~~~~~~~~ 600 (694)
T 3dm0_A 522 CVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEGKKLYSLE 600 (694)
T ss_dssp EEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSBCEEEETTTTEEEECCB
T ss_pred EEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCceEEEec
Confidence 99999986 5799999999999999999999999999999999999999 67899999999999999999988877665
Q ss_pred cccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehccccc-------------------ccceEEEEEeeCCCEEE
Q 021247 241 GHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNH-------------------TDQVWGVSFRPLGGRVV 301 (315)
Q Consensus 241 ~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-------------------~~~v~~~~~s~~~~~l~ 301 (315)
. ...|.+++|+|++.+|++++ |+.|++||++++..+..+..+ .-.+++++|||+|++|+
T Consensus 601 ~-~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~ 678 (694)
T 3dm0_A 601 A-NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLF 678 (694)
T ss_dssp C-SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEE
T ss_pred C-CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEE
Confidence 4 46799999999998777665 666999999987766544322 11378999999999999
Q ss_pred EEeCCCcEEEeecC
Q 021247 302 SVSDDKSISLYEYS 315 (315)
Q Consensus 302 s~~~d~~i~i~~~~ 315 (315)
+++.||+|+||++.
T Consensus 679 sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 679 SGYTDGVIRVWGIG 692 (694)
T ss_dssp EEETTSEEEEEEC-
T ss_pred EEcCCCeEEEEecc
Confidence 99999999999974
No 21
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.6e-45 Score=304.61 Aligned_cols=250 Identities=19% Similarity=0.327 Sum_probs=225.3
Q ss_pred cceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEE
Q 021247 51 QLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLW 130 (315)
Q Consensus 51 ~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~ 130 (315)
++.+.+.+|...|.+++|+|+|.++++++.|++|++||+.++..+..+..+..+|.+++|+|+++.+ ++|+.|++|++|
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~s~d~~i~vw 82 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWI-IVGSDDFRIRVF 82 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEE-EEEETTSEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEE-EEECCCCEEEEE
Confidence 4566788999999999999999999999999999999999999999999999999999999998855 678899999999
Q ss_pred ecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccc-eeeeeecCCccceEEEEEc
Q 021247 131 DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRA-KFLHHLEGHFMPVRSLVYS 209 (315)
Q Consensus 131 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~ 209 (315)
|+.+++.+..+. .|...|.+++|+|++++|++|+.|+.|++||++++ .....+.+|...|.+++|+
T Consensus 83 d~~~~~~~~~~~-------------~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~ 149 (304)
T 2ynn_A 83 NYNTGEKVVDFE-------------AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFN 149 (304)
T ss_dssp ETTTCCEEEEEE-------------CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEEC
T ss_pred ECCCCcEEEEEe-------------CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEEC
Confidence 999888776663 34556999999999999999999999999999877 5566788999999999999
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCCCeeEEEe-ecccccEEEEEEcC--CCCeEEEEeCCCcEEEEecCccceehccccccc
Q 021247 210 PVDPRVLFSASDDTHVHMYDAEGKSLVTAM-SGHASWVLSVDASP--DGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTD 286 (315)
Q Consensus 210 ~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~-~~~~~~i~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 286 (315)
|.++.+|++|+.|+.|++||++.......+ .+|...+..+.++| ++.+|++|+.|++|++||+++++.+.++.+|..
T Consensus 150 p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~ 229 (304)
T 2ynn_A 150 PKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMS 229 (304)
T ss_dssp TTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCC
Confidence 988889999999999999999876554444 45667899999887 678999999999999999999999999999999
Q ss_pred ceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 287 QVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 287 ~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
.|.+++|+|++.+|++++.||+|+|||.
T Consensus 230 ~v~~~~~~p~~~~l~s~s~Dg~i~iWd~ 257 (304)
T 2ynn_A 230 NVSFAVFHPTLPIIISGSEDGTLKIWNS 257 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred CEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 9999999999999999999999999996
No 22
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3e-45 Score=329.75 Aligned_cols=280 Identities=36% Similarity=0.612 Sum_probs=248.5
Q ss_pred hhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEE
Q 021247 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFD 88 (315)
Q Consensus 9 ~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~ 88 (315)
.+.+|..+|++++|+|++. .|++++.|++|++|+..... ...+.+|...+.+++++|+|.++++++.|+.+++|+
T Consensus 298 ~~~~h~~~v~~~~~~~~~~----~l~t~~~d~~i~~w~~~~~~-~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~ 372 (577)
T 2ymu_A 298 TLTGHSSSVWGVAFSPDGQ----TIASASDDKTVKLWNRNGQH-LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 372 (577)
T ss_dssp EECCCSSCEEEEEECTTSS----EEEEEETTSCEEEEETTSCE-EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEecCCCCeEEEEECCCCC----EEEEEeCCCeEEEEeCCCCe-eEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEc
Confidence 4568999999999999765 79999999999999976543 456678999999999999999999999999999999
Q ss_pred CCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECC
Q 021247 89 VDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP 168 (315)
Q Consensus 89 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 168 (315)
. +++.+..+..|..+|.+++|+|+++.+ ++++.|+.|++||.. ++.+..+. .|...|.+++|+|
T Consensus 373 ~-~~~~~~~~~~~~~~v~~~~~s~dg~~l-~~~~~d~~v~~~~~~-~~~~~~~~-------------~~~~~v~~~~~s~ 436 (577)
T 2ymu_A 373 R-NGQLLQTLTGHSSSVRGVAFSPDGQTI-ASASDDKTVKLWNRN-GQLLQTLT-------------GHSSSVWGVAFSP 436 (577)
T ss_dssp T-TCCEEEEEECCSSCEEEEEECTTSSCE-EEEETTSEEEEECTT-CCEEEEEE-------------CCSSCEEEEEECT
T ss_pred C-CCCEEEEecCCCCCeEEEEECCCCCEE-EEEeCCCEEEEEeCC-CCEEEEec-------------CCCCCeEEEEECC
Confidence 5 567778888899999999999999865 577899999999963 45554442 2445699999999
Q ss_pred CCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEE
Q 021247 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248 (315)
Q Consensus 169 ~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~ 248 (315)
++++|++++.|+.|++||+ +++.+..+.+|..+|.+++|+| ++++|++++.|+.|++||. +++.+..+.+|...|++
T Consensus 437 d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~sp-d~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~ 513 (577)
T 2ymu_A 437 DDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRG 513 (577)
T ss_dssp TSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECT-TSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEE
T ss_pred CCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEE
Confidence 9999999999999999996 5677788899999999999999 6789999999999999995 56677888999999999
Q ss_pred EEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEee
Q 021247 249 VDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313 (315)
Q Consensus 249 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 313 (315)
++|+|++++|++++.|+.|++||. .++.+.++.+|.+.|++++|+|||++|++++.|++|++||
T Consensus 514 l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 514 VAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999999999999999999999996 4678888999999999999999999999999999999997
No 23
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.5e-46 Score=317.72 Aligned_cols=295 Identities=16% Similarity=0.237 Sum_probs=249.2
Q ss_pred hhhhhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccc-----cccceEEEEeCCC----CCEEE
Q 021247 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTG-----HCLGVVSVAAHPS----GIIAA 76 (315)
Q Consensus 6 ~~~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~-----h~~~v~~~~~~~~----g~~l~ 76 (315)
...+..+|+++|++++|+|........+++++.++.|++|+..+.+....+.. |...|.+++|+|+ |.+++
T Consensus 10 ~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~ 89 (366)
T 3k26_A 10 VNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLA 89 (366)
T ss_dssp EEEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEE
T ss_pred EEEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEE
Confidence 34566799999999999996433345678888888999999987766555443 5578999999998 67999
Q ss_pred EeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECC-CCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccC
Q 021247 77 SASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDP-KGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKS 155 (315)
Q Consensus 77 s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 155 (315)
+++.|+.|++||+.+++.+..+..|...|.+++|+| ++. ++++++.|+.|++||+++++.+..+.. ..
T Consensus 90 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~----------~~ 158 (366)
T 3k26_A 90 VAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPN-LLLSVSKDHALRLWNIQTDTLVAIFGG----------VE 158 (366)
T ss_dssp EEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTT-EEEEEETTSCEEEEETTTTEEEEEECS----------TT
T ss_pred EecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCC-EEEEEeCCCeEEEEEeecCeEEEEecc----------cc
Confidence 999999999999999999999999999999999999 555 567888999999999998877766521 12
Q ss_pred CCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeec----------------------------CCccceEEEE
Q 021247 156 SSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLE----------------------------GHFMPVRSLV 207 (315)
Q Consensus 156 ~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~----------------------------~~~~~v~~~~ 207 (315)
.+...|.+++|+|++++|++++.||.|++||+++++....+. .|...|.++.
T Consensus 159 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 238 (366)
T 3k26_A 159 GHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVR 238 (366)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEE
T ss_pred cccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEE
Confidence 345569999999999999999999999999998776543333 3889999999
Q ss_pred EcCCCCcEEEEEeCCCeEEEEeCCCCe--------------eEEEeecccccEEEEEEcCC--CCeEEEEeCCCcEEEEe
Q 021247 208 YSPVDPRVLFSASDDTHVHMYDAEGKS--------------LVTAMSGHASWVLSVDASPD--GAAITTGSSDRTVKLWD 271 (315)
Q Consensus 208 ~~~~~~~~l~s~~~d~~i~~wd~~~~~--------------~~~~~~~~~~~i~~~~~~~~--~~~l~s~~~d~~i~iwd 271 (315)
|+ +.++++++.|+.|++||++... .+..+..|...|.+++|+|+ +++|++|+.||.|++||
T Consensus 239 ~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd 315 (366)
T 3k26_A 239 WL---GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWD 315 (366)
T ss_dssp EE---TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEE
T ss_pred Ec---CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEE
Confidence 98 4599999999999999987653 36777889999999999999 99999999999999999
Q ss_pred cCccceeh----ccccc--ccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 272 LNMRAAMQ----SMTNH--TDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 272 ~~~~~~~~----~~~~~--~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
++.++... .+..| ...|++++|+|++++|++++.||.|+|||+
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 316 LEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp CCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 99876443 56666 689999999999999999999999999997
No 24
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.6e-45 Score=309.20 Aligned_cols=249 Identities=23% Similarity=0.292 Sum_probs=215.3
Q ss_pred hccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceee----ccccccceEEEEeCCCCCEEEEeeCCCeEEE
Q 021247 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERT----NTGHCLGVVSVAAHPSGIIAASASLDSFVRV 86 (315)
Q Consensus 11 ~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~----~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~ 86 (315)
..|+..|++++|+|+. .|++|+.||+|++||.++.+.... ..+|...|.+++|+|+|++|++++.|++|++
T Consensus 79 ~~~~~~v~~~~~s~d~-----~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~i 153 (344)
T 4gqb_B 79 VQTEAGVADLTWVGER-----GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKV 153 (344)
T ss_dssp EEESSCEEEEEEETTT-----EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eccCCCEEEEEEeCCC-----eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 3466789999999864 589999999999999987765432 4589999999999999999999999999999
Q ss_pred EECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEE
Q 021247 87 FDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW 166 (315)
Q Consensus 87 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 166 (315)
||+.+++.+..+..|...|.+++|+|++..++++++.|++|++||+++++....+... .+...+.+++|
T Consensus 154 wd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-----------~~~~~~~~~~~ 222 (344)
T 4gqb_B 154 WDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCS-----------APGYLPTSLAW 222 (344)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC---------------CCCEEEEEE
T ss_pred EECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecc-----------eeeccceeeee
Confidence 9999999999999999999999999999878889999999999999988777655322 12334889999
Q ss_pred CCC-CCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeeccccc
Q 021247 167 SPD-GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASW 245 (315)
Q Consensus 167 ~~~-~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~ 245 (315)
+|+ +++|++|+.||.|++||+++++.+..+.+|...|++++|+|++.++|++++.|++|++||.+.+++. .+.+|.+.
T Consensus 223 ~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~ 301 (344)
T 4gqb_B 223 HPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDF 301 (344)
T ss_dssp CSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSC
T ss_pred cCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCC
Confidence 995 5678999999999999999999999999999999999999976688999999999999999988765 56889999
Q ss_pred EEEEEEcCCCC-eEEEEeCCCcEEEEecCccc
Q 021247 246 VLSVDASPDGA-AITTGSSDRTVKLWDLNMRA 276 (315)
Q Consensus 246 i~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~ 276 (315)
|++++|+|+++ +|++++.|++|++|++.+..
T Consensus 302 V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 302 VRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 99999999886 57799999999999998643
No 25
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-44 Score=311.55 Aligned_cols=297 Identities=15% Similarity=0.216 Sum_probs=253.2
Q ss_pred ccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcC----CCCc------ceeeccc----------cccceEEEEeCCC
Q 021247 12 AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRP----DDMQ------LERTNTG----------HCLGVVSVAAHPS 71 (315)
Q Consensus 12 ~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~----~~~~------~~~~~~~----------h~~~v~~~~~~~~ 71 (315)
.|.++|++++|+|.+. .+|++|+.||.|++|+. .+.+ ....+.. |...|.+++|+|+
T Consensus 43 ~~~~~v~~~~~s~~~~---~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 119 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDE---SILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHD 119 (425)
T ss_dssp EECSCCSEEEECSSCT---TEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTT
T ss_pred eccCceEEEEECCCCC---cEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCC
Confidence 4569999999999764 37999999999999999 7666 2222222 6779999999999
Q ss_pred CCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCC---
Q 021247 72 GIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEG--- 148 (315)
Q Consensus 72 g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~--- 148 (315)
+.+|++++.|+.|++|| .++..+..+..|...|.+++|+|+++.+ ++++.|+.|++||+.+++.+..+..+....
T Consensus 120 ~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 120 GNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHI-ISMDVENVTILWNVISGTVMQHFELKETGGSSI 197 (425)
T ss_dssp SSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEE-EEEETTCCEEEEETTTTEEEEEECCC-------
T ss_pred CCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEE-EEEecCCeEEEEECCCCcEEEEeeccccCccce
Confidence 99999999999999999 6677888888899999999999998865 567889999999999888776654432210
Q ss_pred ----------------------------------------CCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcc
Q 021247 149 ----------------------------------------LKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 188 (315)
Q Consensus 149 ----------------------------------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~ 188 (315)
........+...|.+++|+|++++|++++.|+.|++||++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~ 277 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGG 277 (425)
T ss_dssp --------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSS
T ss_pred eeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 0011122456779999999999999999999999999999
Q ss_pred cceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEE
Q 021247 189 RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVK 268 (315)
Q Consensus 189 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~ 268 (315)
+++....+..|...+.++.|+|. + ++++++.|+.|++||++.++.+..+..|...|.+++|+|++++|++++.||.|+
T Consensus 278 ~~~~~~~~~~~~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~ 355 (425)
T 1r5m_A 278 NGNSQNCFYGHSQSIVSASWVGD-D-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVN 355 (425)
T ss_dssp SBSCSEEECCCSSCEEEEEEETT-T-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCccceEecCCCccEEEEEECCC-C-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEE
Confidence 99988889999999999999994 4 999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCccc--------------------eehccccccc--ceEEEEEeeCCCEEEEEeCCCcEEEeecC
Q 021247 269 LWDLNMRA--------------------AMQSMTNHTD--QVWGVSFRPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 269 iwd~~~~~--------------------~~~~~~~~~~--~v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
+||++.++ .+..+..|.. .|++++|+|++++|++++.||.|+||++.
T Consensus 356 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 356 VYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred EEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 99999887 7888888876 99999999999999999999999999974
No 26
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.7e-44 Score=310.59 Aligned_cols=246 Identities=28% Similarity=0.439 Sum_probs=228.4
Q ss_pred eeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecC
Q 021247 54 RTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTA 133 (315)
Q Consensus 54 ~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~ 133 (315)
..+.+|..+|+++.|+|++.++++|+.|++|++||+.+++....+..|...|.+++|+|+++. +++|+.|++|++||+.
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~-l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL-LASCSADMTIKLWDFQ 180 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSE-EEEEETTSCCCEEETT
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCE-EEEEeCCCeEEEEeCC
Confidence 446789999999999999999999999999999999999999999999999999999999884 5788999999999998
Q ss_pred CcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCC
Q 021247 134 TWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDP 213 (315)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 213 (315)
+.+.+..+. .|...|.+++|+|++++|++|+.|+.|++||+++++.+..+.+|...|.++.|+| ++
T Consensus 181 ~~~~~~~~~-------------~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~g 246 (410)
T 1vyh_C 181 GFECIRTMH-------------GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ-DG 246 (410)
T ss_dssp SSCEEECCC-------------CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-TS
T ss_pred CCceeEEEc-------------CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECC-CC
Confidence 877665542 3455699999999999999999999999999999999999999999999999998 67
Q ss_pred cEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCC--------------------CCeEEEEeCCCcEEEEecC
Q 021247 214 RVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPD--------------------GAAITTGSSDRTVKLWDLN 273 (315)
Q Consensus 214 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~--------------------~~~l~s~~~d~~i~iwd~~ 273 (315)
.++++++.|+.|++||++.+.....+.+|...|.+++|+|+ +.+|++|+.|++|++||++
T Consensus 247 ~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~ 326 (410)
T 1vyh_C 247 TLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326 (410)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETT
T ss_pred CEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECC
Confidence 89999999999999999999888899999999999999996 6789999999999999999
Q ss_pred ccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 274 MRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 274 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
++..+.++.+|...|++++|+|+|++|++++.|++|+|||+
T Consensus 327 ~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~ 367 (410)
T 1vyh_C 327 TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 (410)
T ss_dssp TTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECC
T ss_pred CCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 99999999999999999999999999999999999999996
No 27
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=9.3e-44 Score=320.07 Aligned_cols=295 Identities=36% Similarity=0.569 Sum_probs=250.8
Q ss_pred hhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEEC
Q 021247 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDV 89 (315)
Q Consensus 10 ~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~ 89 (315)
+.+|++.|++++|+|++. +|++|+.|++|++||. +.++.+.+.+|..+|.+++|+|+|++|++++.|++|++||.
T Consensus 12 L~GH~~~V~~~a~spdg~----~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~ 86 (577)
T 2ymu_A 12 LEAHSSSVRGVAFSPDGQ----TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 86 (577)
T ss_dssp ECCCSSCEEEEEECTTSS----CEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred ECCCCCcEEEEEECCCCC----EEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 679999999999999876 6999999999999995 66778888999999999999999999999999999999996
Q ss_pred CCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecC----------CCC-------------
Q 021247 90 DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSI----------PRP------------- 146 (315)
Q Consensus 90 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~----------~~~------------- 146 (315)
+++.+..+..|..+|.+++|+|+++.+ ++++.|+.+++|+............ +..
T Consensus 87 -~~~~~~~~~~~~~~v~~~~~s~d~~~l-~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 164 (577)
T 2ymu_A 87 -NGQLLQTLTGHSSSVRGVAFSPDGQTI-ASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVK 164 (577)
T ss_dssp -TSCEEEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred -CCCEEEEEECCCCCEEEEEECCCCCEE-EEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceeccccccee
Confidence 567788899999999999999998865 6788999999999764322111100 000
Q ss_pred ----CCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCC
Q 021247 147 ----EGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222 (315)
Q Consensus 147 ----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 222 (315)
..........+...+..+.++|++++|++++.|+.|++||. +++.+..+.+|...|.+++|+| ++++|++++.|
T Consensus 165 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~-dg~~l~~~~~d 242 (577)
T 2ymu_A 165 LWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDD 242 (577)
T ss_dssp EECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECT-TSSCEEEEETT
T ss_pred ccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECC-CCCEEEEEeCC
Confidence 00000111234566889999999999999999999999996 5677788889999999999998 67789999999
Q ss_pred CeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEE
Q 021247 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVS 302 (315)
Q Consensus 223 ~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 302 (315)
+.|++||.. ++.+..+.+|...|.+++|+|+++.+++++.|+.|++|+.. ++.+..+.+|...|++++|+|++.+|++
T Consensus 243 ~~i~~w~~~-~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t 320 (577)
T 2ymu_A 243 KTVKLWNRN-GQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIAS 320 (577)
T ss_dssp SCEEEECTT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CEEEEEeCC-CCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEecCCCCeEEEEECCCCCEEEE
Confidence 999999965 45677788999999999999999999999999999999975 5667778899999999999999999999
Q ss_pred EeCCCcEEEeecC
Q 021247 303 VSDDKSISLYEYS 315 (315)
Q Consensus 303 ~~~d~~i~i~~~~ 315 (315)
++.|++|++|+.+
T Consensus 321 ~~~d~~i~~w~~~ 333 (577)
T 2ymu_A 321 ASDDKTVKLWNRN 333 (577)
T ss_dssp EETTSCEEEEETT
T ss_pred EeCCCeEEEEeCC
Confidence 9999999999863
No 28
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-45 Score=319.04 Aligned_cols=294 Identities=17% Similarity=0.281 Sum_probs=251.5
Q ss_pred hccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCC----CcceeeccccccceEEEEeCCC-CCEEEEeeCCCeEE
Q 021247 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD----MQLERTNTGHCLGVVSVAAHPS-GIIAASASLDSFVR 85 (315)
Q Consensus 11 ~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~----~~~~~~~~~h~~~v~~~~~~~~-g~~l~s~~~d~~i~ 85 (315)
..|...|++++|+|.+. +|++|+.||.|++|+... .+....+.+|...|.+++|+|+ +.++++++.|+.|+
T Consensus 64 ~~~~~~v~~~~~s~~~~----~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~ 139 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNK----IIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIF 139 (416)
T ss_dssp CCCSSCEEEEEECSSSS----CEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEE
T ss_pred EecCCceEEEEECCCCC----eEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEE
Confidence 36899999999999765 699999999999999876 3466778899999999999998 89999999999999
Q ss_pred EEECCCCc------eeEE---eeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCC
Q 021247 86 VFDVDTNA------SIAT---LEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156 (315)
Q Consensus 86 ~w~~~~~~------~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (315)
+||+.+++ .... ...|...|.+++|+|++..++++++.|+.|++||+++.+.+..+..+... ..
T Consensus 140 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~-------~~ 212 (416)
T 2pm9_A 140 IWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPN-------SG 212 (416)
T ss_dssp BCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCS-------SC
T ss_pred EEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccc-------cc
Confidence 99999876 3222 35677899999999996567788899999999999998887776543211 12
Q ss_pred CCcceEEEEECCCC-CEEEEecCCC---cEEEEEcccc-eeeeeec-CCccceEEEEEcCCCCcEEEEEeCCCeEEEEeC
Q 021247 157 SKKFVLSVAWSPDG-RRIACGSMDG---TISVFDVTRA-KFLHHLE-GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA 230 (315)
Q Consensus 157 ~~~~i~~~~~~~~~-~~l~~~s~dg---~i~i~d~~~~-~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~ 230 (315)
+...+.+++|+|++ .+|++++.|+ .|++||++++ +....+. +|...|.+++|+|.++.+|++++.|+.|++||+
T Consensus 213 ~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~ 292 (416)
T 2pm9_A 213 IKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNP 292 (416)
T ss_dssp CCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECS
T ss_pred cCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeC
Confidence 34569999999997 6889999998 9999999986 5667777 899999999999977889999999999999999
Q ss_pred CCCeeEEEeecccccEEEEEEcCCC-CeEEEEeCCCcEEEEecCccceehcccc--------------------------
Q 021247 231 EGKSLVTAMSGHASWVLSVDASPDG-AAITTGSSDRTVKLWDLNMRAAMQSMTN-------------------------- 283 (315)
Q Consensus 231 ~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~-------------------------- 283 (315)
++++.+..+.+|...|.+++|+|++ .+|++++.|+.|++|++...........
T Consensus 293 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (416)
T 2pm9_A 293 ESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPS 372 (416)
T ss_dssp SSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCC
T ss_pred CCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccc
Confidence 9999999999999999999999998 8999999999999999987654322211
Q ss_pred ---------cccceEEEEEeeCCCEEEEEeCCCcEEEeecC
Q 021247 284 ---------HTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 284 ---------~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
|..++.+++|+|+|++|++++.|++|+||++.
T Consensus 373 ~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~ 413 (416)
T 2pm9_A 373 VFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPK 413 (416)
T ss_dssp SSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCC
T ss_pred cccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEec
Confidence 56778899999999999999999999999974
No 29
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.6e-43 Score=293.84 Aligned_cols=281 Identities=19% Similarity=0.261 Sum_probs=244.0
Q ss_pred hccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeec-----cccccceEEEEeCCCCCEEEEeeCCCeEE
Q 021247 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTN-----TGHCLGVVSVAAHPSGIIAASASLDSFVR 85 (315)
Q Consensus 11 ~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~-----~~h~~~v~~~~~~~~g~~l~s~~~d~~i~ 85 (315)
.+|.+.|++++|+|.+. ++++++ ||.|++|+..+.+..... .+|...|.++.|+|++.++++++.|+.|+
T Consensus 48 ~~h~~~v~~~~~~~~~~----~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 122 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTR----HVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLS 122 (337)
T ss_dssp ECCSSCCCEEEECSSSS----EEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEE
T ss_pred ccCCCceEEEEEecCCc----EEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEE
Confidence 47999999999999765 688888 999999998765533222 27889999999999999999999999999
Q ss_pred EEECCCCc--eeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEE
Q 021247 86 VFDVDTNA--SIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLS 163 (315)
Q Consensus 86 ~w~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 163 (315)
+||+.+++ ....+..+...+.+++|+|+++.+ ++++.|+.|++||+++++.+..+.. +...+.+
T Consensus 123 ~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~v~~~d~~~~~~~~~~~~-------------~~~~i~~ 188 (337)
T 1gxr_A 123 IWDLAAPTPRIKAELTSSAPACYALAISPDSKVC-FSCCSDGNIAVWDLHNQTLVRQFQG-------------HTDGASC 188 (337)
T ss_dssp EEECCCC--EEEEEEECSSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTTEEEEEECC-------------CSSCEEE
T ss_pred EEECCCCCcceeeecccCCCceEEEEECCCCCEE-EEEeCCCcEEEEeCCCCceeeeeec-------------ccCceEE
Confidence 99999887 556677888899999999998865 5678899999999998877766532 3445999
Q ss_pred EEECCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeeccc
Q 021247 164 VAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHA 243 (315)
Q Consensus 164 ~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~ 243 (315)
++|+|++++|++++.|+.|++||+++++.+..+. +...+.++.|+| +++++++++.|+.|++||.+..+.. .+..|.
T Consensus 189 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~-~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~ 265 (337)
T 1gxr_A 189 IDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCP-TGEWLAVGMESSNVEVLHVNKPDKY-QLHLHE 265 (337)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTSSCEE-EECCCS
T ss_pred EEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCCeE-EEcCCc
Confidence 9999999999999999999999999988777664 667899999998 6779999999999999999887654 567899
Q ss_pred ccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 244 SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 244 ~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
..|.+++|+|++++|++++.||.|++||+..++.+.. ..|...+.+++|+|++++|++++.||.|++|++
T Consensus 266 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 266 SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE-EECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred cceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEE-ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 9999999999999999999999999999998877644 457889999999999999999999999999996
No 30
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.1e-44 Score=306.83 Aligned_cols=293 Identities=15% Similarity=0.272 Sum_probs=241.5
Q ss_pred hhhccccceEEEEEeecCCCCCcEEEEeeC---CCcEEEEcCCCCcceee-ccccccceEEEEeCCC---CCEEEEeeCC
Q 021247 9 VENAHEESVWAVTWVPATETRPALLLTGSL---DETVKLWRPDDMQLERT-NTGHCLGVVSVAAHPS---GIIAASASLD 81 (315)
Q Consensus 9 ~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~---d~~v~~w~~~~~~~~~~-~~~h~~~v~~~~~~~~---g~~l~s~~~d 81 (315)
+..+|.+.|++++|+|.+. .++++|+. |+.|++|+..+.+.... ..+|..+|.+++|+|+ |.++++++.|
T Consensus 13 ~~~~h~~~v~~~~~~p~~~---~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d 89 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSA---KFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG 89 (357)
T ss_dssp EEEECSSCEEEEEECTTSS---EEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred hccCCCCceEEEEEcCCCc---eEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC
Confidence 4468999999999999764 36777776 99999999988775443 3478999999999998 7999999999
Q ss_pred CeEEEEECCCCc-eeEEeeCCcccEEEEEE------CCCCCeEEEEecCCCeEEEEecCCcc-eeeeecCCCCCCCCCCc
Q 021247 82 SFVRVFDVDTNA-SIATLEASPSEVWQMQF------DPKGTTLAVAGGGSASVKLWDTATWN-LIATLSIPRPEGLKPTD 153 (315)
Q Consensus 82 ~~i~~w~~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~~~~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~ 153 (315)
+.|++||+.+++ .+..+..|...|.+++| +|+++. +++++.|+.|++||+++.+ .+..+.....
T Consensus 90 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~------- 161 (357)
T 3i2n_A 90 GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPE-IVTGSRDGTVKVWDPRQKDDPVANMEPVQG------- 161 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCE-EEEEETTSCEEEECTTSCSSCSEEECCCTT-------
T ss_pred CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccE-EEEEeCCCeEEEEeCCCCCCcceeccccCC-------
Confidence 999999999988 78888999999999965 677775 4678899999999998865 4444432211
Q ss_pred cCCCCcceEEEE----ECCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCC--CCcEEEEEeCCCeEEE
Q 021247 154 KSSSKKFVLSVA----WSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV--DPRVLFSASDDTHVHM 227 (315)
Q Consensus 154 ~~~~~~~i~~~~----~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~d~~i~~ 227 (315)
.....+.+++ |+|++++|++++.|+.|++||+++++.... ..|...+.++.|+|. ++.++++++.|+.|++
T Consensus 162 --~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i 238 (357)
T 3i2n_A 162 --ENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHV 238 (357)
T ss_dssp --SCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEE
T ss_pred --CCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEE
Confidence 1123577887 788999999999999999999998886443 567889999999984 5678999999999999
Q ss_pred EeCCCCeeEEE-----eecccccEEEEEEcCCCC-eEEEEeCCCcEEEEecCcc-------------------ceehccc
Q 021247 228 YDAEGKSLVTA-----MSGHASWVLSVDASPDGA-AITTGSSDRTVKLWDLNMR-------------------AAMQSMT 282 (315)
Q Consensus 228 wd~~~~~~~~~-----~~~~~~~i~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~-------------------~~~~~~~ 282 (315)
||++.+..... +.+|...|.+++|+|+++ +|++++.||.|++||++.. +.+..+.
T Consensus 239 ~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 318 (357)
T 3i2n_A 239 FDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVT 318 (357)
T ss_dssp EEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEE
T ss_pred EeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccc
Confidence 99876654333 348999999999999998 8999999999999999753 3456677
Q ss_pred ccccceEEEEEeeCCCEEE-EEeCCCcEEEeecC
Q 021247 283 NHTDQVWGVSFRPLGGRVV-SVSDDKSISLYEYS 315 (315)
Q Consensus 283 ~~~~~v~~~~~s~~~~~l~-s~~~d~~i~i~~~~ 315 (315)
+|...|++++|+|++++|+ +++.|+.|+||++.
T Consensus 319 ~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 319 LSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp CCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred cCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 8999999999999999998 89999999999974
No 31
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=8e-44 Score=304.91 Aligned_cols=284 Identities=15% Similarity=0.219 Sum_probs=235.1
Q ss_pred hhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeecc--ccccceEEEEeCC-CCCEEEEeeCCCeEE
Q 021247 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNT--GHCLGVVSVAAHP-SGIIAASASLDSFVR 85 (315)
Q Consensus 9 ~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~--~h~~~v~~~~~~~-~g~~l~s~~~d~~i~ 85 (315)
.+.+|.+.|++++|+|.+. .+|++|+.||.|++|+..+.+....+. +|...|.+++|+| ++.++++++.|+.|+
T Consensus 68 ~~~~h~~~v~~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~ 144 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHP---TTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATT 144 (383)
T ss_dssp EECCCSSCEEEEEECSSCT---TEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEE
T ss_pred eccCCCCCEEEEEECCCCC---CEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEE
Confidence 4568999999999999762 389999999999999998777665543 6999999999999 789999999999999
Q ss_pred EEECCCCceeEEeeCC---cccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceE
Q 021247 86 VFDVDTNASIATLEAS---PSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVL 162 (315)
Q Consensus 86 ~w~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 162 (315)
+||+.+ ..+..+..+ ...+.+++|+|+++.+ ++++.|+.|++||++ ++.+..+. .|...|.
T Consensus 145 iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~d~~-~~~~~~~~-------------~h~~~v~ 208 (383)
T 3ei3_B 145 LRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQML-ATGDSTGRLLLLGLD-GHEIFKEK-------------LHKAKVT 208 (383)
T ss_dssp EEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEE-EEEETTSEEEEEETT-SCEEEEEE-------------CSSSCEE
T ss_pred EEECCC-CceEEEeccCCCCCCeEEEEECCCCCEE-EEECCCCCEEEEECC-CCEEEEec-------------cCCCcEE
Confidence 999986 444555433 3779999999998855 678899999999994 45554443 2445699
Q ss_pred EEEECCCCC-EEEEecCCCcEEEEEccc----ceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEE
Q 021247 163 SVAWSPDGR-RIACGSMDGTISVFDVTR----AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT 237 (315)
Q Consensus 163 ~~~~~~~~~-~l~~~s~dg~i~i~d~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~ 237 (315)
+++|+|+++ +|++++.|+.|++||+++ +..+..+ .|...|.+++|+|.++.+|++++.|+.|++||++.++.+.
T Consensus 209 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 287 (383)
T 3ei3_B 209 HAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPD 287 (383)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCS
T ss_pred EEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccc
Confidence 999999998 899999999999999987 5555555 6899999999998567899999999999999998776655
Q ss_pred Eeeccc-----------------ccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccc--cccceEEEEEeeCCC
Q 021247 238 AMSGHA-----------------SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN--HTDQVWGVSFRPLGG 298 (315)
Q Consensus 238 ~~~~~~-----------------~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~~~~s~~~~ 298 (315)
.+.+|. ..+..++++|++++ +++.|+.|++||+.+++.+.++.+ |...+..++|+|++.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~ 365 (383)
T 3ei3_B 288 QIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGD 365 (383)
T ss_dssp EEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSS
T ss_pred ccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCcc
Confidence 554432 33455777777776 888999999999999998888876 456777789999999
Q ss_pred EEEEEeCCCcEEEeecC
Q 021247 299 RVVSVSDDKSISLYEYS 315 (315)
Q Consensus 299 ~l~s~~~d~~i~i~~~~ 315 (315)
+|++++ |++|+|||+.
T Consensus 366 ~l~s~s-d~~i~iw~~~ 381 (383)
T 3ei3_B 366 VLASGM-GFNILIWNRE 381 (383)
T ss_dssp EEEEEE-TTEEEEEECC
T ss_pred EEEEec-CCcEEEEecC
Confidence 999997 9999999974
No 32
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=6.7e-44 Score=303.72 Aligned_cols=289 Identities=16% Similarity=0.181 Sum_probs=245.0
Q ss_pred hhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCc--ceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEE
Q 021247 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQ--LERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVF 87 (315)
Q Consensus 10 ~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~--~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w 87 (315)
...|+++|++++|+|+++ +|++|+.|+.|++|+..+.+ ....+.+|...|.+++|+|++.++++++.|+.|++|
T Consensus 4 ~~~~~~~i~~~~~s~~~~----~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRT----QIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVW 79 (372)
T ss_dssp EESCSSCCCEEEECTTSS----EEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred ecccCCCeEEEEECCCCC----EEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEE
Confidence 346999999999999765 79999999999999998776 677788999999999999999999999999999999
Q ss_pred ECCCCceeEE--eeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEE
Q 021247 88 DVDTNASIAT--LEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVA 165 (315)
Q Consensus 88 ~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 165 (315)
|+.+++.... +..+...+.+++|+|+++.+ ++++.|+.|++||++..+....... ....+...|.+++
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~i~d~~~~~~~~~~~~---------~~~~~~~~i~~~~ 149 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKF-AVGSGSRVISICYFEQENDWWVCKH---------IKKPIRSTVLSLD 149 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEE-EEEETTSSEEEEEEETTTTEEEEEE---------ECTTCCSCEEEEE
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEE-EEEeCCCEEEEEEecCCCcceeeee---------eecccCCCeeEEE
Confidence 9988875443 35678899999999998865 6678899999999987653211110 0123455699999
Q ss_pred ECCCCCEEEEecCCCcEEEEEc------------------ccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEE
Q 021247 166 WSPDGRRIACGSMDGTISVFDV------------------TRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 227 (315)
Q Consensus 166 ~~~~~~~l~~~s~dg~i~i~d~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~ 227 (315)
|+|++++|++++.|+.|++||+ ..++.+..+..|...+.++.|+| ++.+|++++.|+.|++
T Consensus 150 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i 228 (372)
T 1k8k_C 150 WHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA-NGSRVAWVSHDSTVCL 228 (372)
T ss_dssp ECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS-SSSEEEEEETTTEEEE
T ss_pred EcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC-CCCEEEEEeCCCEEEE
Confidence 9999999999999999999995 35677888889999999999998 6679999999999999
Q ss_pred EeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCc--cce----------------------e-----
Q 021247 228 YDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM--RAA----------------------M----- 278 (315)
Q Consensus 228 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~--~~~----------------------~----- 278 (315)
||++.++.+..+..|...|.+++|+|+++++++| .|+.|++|+++. +.. +
T Consensus 229 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (372)
T 1k8k_C 229 ADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDK 307 (372)
T ss_dssp EEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCC
T ss_pred EECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhccc
Confidence 9999998999999999999999999999988877 999999999977 310 0
Q ss_pred -----------hcc-cccccceEEEEEe-eCC---CEEEEEeCCCcEEEeec
Q 021247 279 -----------QSM-TNHTDQVWGVSFR-PLG---GRVVSVSDDKSISLYEY 314 (315)
Q Consensus 279 -----------~~~-~~~~~~v~~~~~s-~~~---~~l~s~~~d~~i~i~~~ 314 (315)
..+ .+|...|++++|+ ++| .+|++++.||+|+||++
T Consensus 308 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~ 359 (372)
T 1k8k_C 308 KASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 359 (372)
T ss_dssp CC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEH
T ss_pred ccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEe
Confidence 222 4899999999966 566 89999999999999996
No 33
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-45 Score=313.65 Aligned_cols=297 Identities=19% Similarity=0.288 Sum_probs=250.9
Q ss_pred ccccceEEEEEeecCCCCCcEEEEe----------eCCCcEEEEcCCCCcce--eeccccccceEEEEeCCCCCEEEEee
Q 021247 12 AHEESVWAVTWVPATETRPALLLTG----------SLDETVKLWRPDDMQLE--RTNTGHCLGVVSVAAHPSGIIAASAS 79 (315)
Q Consensus 12 ~h~~~v~~v~~~~~~~~~~~~l~sg----------s~d~~v~~w~~~~~~~~--~~~~~h~~~v~~~~~~~~g~~l~s~~ 79 (315)
.+...|++++|+|++. .+|++| +.|+.|++|+..+.+.. .....|...|.+++|+|++.+|++++
T Consensus 10 ~~~~~v~~~~~sp~g~---~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 86 (416)
T 2pm9_A 10 AEFSRTATFAWSHDKI---PLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGAL 86 (416)
T ss_dssp CEEEESCBCCBCSSSS---CEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEE
T ss_pred hhhhhcceEeeCCCCC---CEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEc
Confidence 5667899999999764 379999 89999999999876532 22235888999999999999999999
Q ss_pred CCCeEEEEECCC----CceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccC
Q 021247 80 LDSFVRVFDVDT----NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKS 155 (315)
Q Consensus 80 ~d~~i~~w~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 155 (315)
.|+.|++||+.. ...+..+..|...|.+++|+|++..++++++.|++|++||+++.+...... .........
T Consensus 87 ~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~----~~~~~~~~~ 162 (416)
T 2pm9_A 87 DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNY----TPLTPGQSM 162 (416)
T ss_dssp SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTC----CCBCCCCSC
T ss_pred cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccc----ccccccccc
Confidence 999999999987 347778888999999999999844456788999999999998754110000 000011123
Q ss_pred CCCcceEEEEECCC-CCEEEEecCCCcEEEEEcccceeeeeecCC------ccceEEEEEcCCCCcEEEEEeCCC---eE
Q 021247 156 SSKKFVLSVAWSPD-GRRIACGSMDGTISVFDVTRAKFLHHLEGH------FMPVRSLVYSPVDPRVLFSASDDT---HV 225 (315)
Q Consensus 156 ~~~~~i~~~~~~~~-~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~s~~~d~---~i 225 (315)
.+...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+..+ ...+.+++|+|.+..++++++.|+ .|
T Consensus 163 ~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i 242 (416)
T 2pm9_A 163 SSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSI 242 (416)
T ss_dssp CSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCC
T ss_pred CCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceE
Confidence 45667999999998 789999999999999999999988888766 789999999997778999999998 99
Q ss_pred EEEeCCCC-eeEEEee-cccccEEEEEEcC-CCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCC-CEEE
Q 021247 226 HMYDAEGK-SLVTAMS-GHASWVLSVDASP-DGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLG-GRVV 301 (315)
Q Consensus 226 ~~wd~~~~-~~~~~~~-~~~~~i~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~ 301 (315)
++||++.. ..+..+. +|...|.+++|+| ++++|++++.|+.|++||+++++.+.++..|...|++++|+|++ .+|+
T Consensus 243 ~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~ 322 (416)
T 2pm9_A 243 LIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFA 322 (416)
T ss_dssp CEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEE
T ss_pred EEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEE
Confidence 99999875 5666677 8999999999999 89999999999999999999999999999999999999999999 8999
Q ss_pred EEeCCCcEEEeecC
Q 021247 302 SVSDDKSISLYEYS 315 (315)
Q Consensus 302 s~~~d~~i~i~~~~ 315 (315)
+++.|++|+||++.
T Consensus 323 s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 323 CASFDNKIEVQTLQ 336 (416)
T ss_dssp ECCSSSEEEEEESC
T ss_pred EEecCCcEEEEEcc
Confidence 99999999999973
No 34
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.1e-43 Score=295.11 Aligned_cols=246 Identities=22% Similarity=0.364 Sum_probs=226.9
Q ss_pred hhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEE
Q 021247 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFD 88 (315)
Q Consensus 9 ~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~ 88 (315)
.+.+|...|.+++|+|... ++++|+.|++|++||..+.+..+.+..|...+.+++|+|++.++++++.|+.|++|+
T Consensus 75 ~l~gh~~~v~~~~~~~~~~----~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~ 150 (321)
T 3ow8_A 75 SLEGHQLGVVSVDISHTLP----IAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFG 150 (321)
T ss_dssp EECCCSSCEEEEEECSSSS----EEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEE
T ss_pred eeccCCCCEEEEEECCCCC----EEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 4679999999999998764 799999999999999999888888888888999999999999999999999999999
Q ss_pred CCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECC
Q 021247 89 VDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP 168 (315)
Q Consensus 89 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 168 (315)
+++++....+..+...+.+++|+|+++++ ++++.|+.|++||+++++.+..+. .|...|.+++|+|
T Consensus 151 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l-asg~~dg~i~iwd~~~~~~~~~~~-------------~h~~~v~~l~~sp 216 (321)
T 3ow8_A 151 VESGKKEYSLDTRGKFILSIAYSPDGKYL-ASGAIDGIINIFDIATGKLLHTLE-------------GHAMPIRSLTFSP 216 (321)
T ss_dssp TTTCSEEEEEECSSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTTEEEEEEC-------------CCSSCCCEEEECT
T ss_pred cCCCceeEEecCCCceEEEEEECCCCCEE-EEEcCCCeEEEEECCCCcEEEEEc-------------ccCCceeEEEEcC
Confidence 99999988888888999999999999865 678899999999999988776663 2344589999999
Q ss_pred CCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEE
Q 021247 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248 (315)
Q Consensus 169 ~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~ 248 (315)
++++|++|+.|+.|++||+++++....+.+|...|.+++|+| ++.+|++++.|+.|++||+++++.+..+.+|...|.+
T Consensus 217 d~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~ 295 (321)
T 3ow8_A 217 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP-DDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWG 295 (321)
T ss_dssp TSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEE
Confidence 999999999999999999999999999999999999999999 6779999999999999999999999999999999999
Q ss_pred EEEcCCCCeEEEEeCCCcEEEEecC
Q 021247 249 VDASPDGAAITTGSSDRTVKLWDLN 273 (315)
Q Consensus 249 ~~~~~~~~~l~s~~~d~~i~iwd~~ 273 (315)
++|+|++++|++++.|++|++||..
T Consensus 296 v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 296 VKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999999964
No 35
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.7e-44 Score=302.11 Aligned_cols=249 Identities=25% Similarity=0.326 Sum_probs=211.6
Q ss_pred hccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCccee----eccccccceEEEEeCCCCCEEEEeeCCCeEEE
Q 021247 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLER----TNTGHCLGVVSVAAHPSGIIAASASLDSFVRV 86 (315)
Q Consensus 11 ~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~----~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~ 86 (315)
..|...|++++|+|+. .+++++.||+|++||..+.+... ...+|...|.+++|+|+|.+|++++.|++|++
T Consensus 91 ~~~~~~V~~~~~s~d~-----~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~i 165 (357)
T 4g56_B 91 VQTEAGVTDVAWVSEK-----GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKV 165 (357)
T ss_dssp EECSSCEEEEEEETTT-----EEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred CCCCCCEEEEEEcCCC-----CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 4789999999999965 37889999999999987665332 34579999999999999999999999999999
Q ss_pred EECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEE
Q 021247 87 FDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW 166 (315)
Q Consensus 87 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 166 (315)
||+++++.+..+..|...|.+++|+|++..++++++.|++|++||+++++....+.. ..+...+.+++|
T Consensus 166 wd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~-----------~~~~~~v~~v~~ 234 (357)
T 4g56_B 166 WDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDF-----------CASDTIPTSVTW 234 (357)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCC-----------TTCCSCEEEEEE
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeee-----------ccccccccchhh
Confidence 999999999999999999999999999877778899999999999988765543322 123445899999
Q ss_pred CCC-CCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeeccccc
Q 021247 167 SPD-GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASW 245 (315)
Q Consensus 167 ~~~-~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~ 245 (315)
+|+ +.+|++|+.|+.|++||+++++.+..+.+|...|++++|+|++.++|++++.|++|++||.++++++.. .+|.+.
T Consensus 235 sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~-~~H~~~ 313 (357)
T 4g56_B 235 HPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD-LSHRDF 313 (357)
T ss_dssp CTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE-CCCSSC
T ss_pred hhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE-CCCCCC
Confidence 997 467889999999999999999999999999999999999997778999999999999999998877655 479999
Q ss_pred EEEEEEcC-CCCeEEEEeCCCcEEEEecCccc
Q 021247 246 VLSVDASP-DGAAITTGSSDRTVKLWDLNMRA 276 (315)
Q Consensus 246 i~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~ 276 (315)
|++++|+| ++.+|+|++.|++|++|++....
T Consensus 314 V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 314 VTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp EEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred EEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 99999999 78999999999999999997643
No 36
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.3e-43 Score=290.26 Aligned_cols=282 Identities=21% Similarity=0.319 Sum_probs=244.5
Q ss_pred chhhhhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeE
Q 021247 5 GLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFV 84 (315)
Q Consensus 5 ~~~~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i 84 (315)
++...+.+|.+.|++++| |.+. +|++|+.||.|++|+..+.+....+..|...|.+++|+|++.++++++.|+.+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~----~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 83 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDS----KVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMI 83 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETT----EEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCC----EEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeE
Confidence 344567899999999999 7654 69999999999999998888888888899999999999999999999999999
Q ss_pred EEEECCCC---ceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcce
Q 021247 85 RVFDVDTN---ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFV 161 (315)
Q Consensus 85 ~~w~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 161 (315)
++|++... +.+..+..|...|.+++|+ ++ ++++++.|+.|++|| ..+....+. .+...+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~d~~i~~~d--~~~~~~~~~-------------~~~~~v 145 (313)
T 3odt_A 84 NGVPLFATSGEDPLYTLIGHQGNVCSLSFQ--DG-VVISGSWDKTAKVWK--EGSLVYNLQ-------------AHNASV 145 (313)
T ss_dssp EEEETTCCTTSCC-CEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEE--TTEEEEEEE-------------CCSSCE
T ss_pred EEEEeeecCCCCcccchhhcccCEEEEEec--CC-EEEEEeCCCCEEEEc--CCcEEEecc-------------cCCCce
Confidence 99998765 4566778889999999994 34 567888999999999 334444442 234458
Q ss_pred EEEEECC-CCCEEEEecCCCcEEEEEcccceeeeeecC-CccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEe
Q 021247 162 LSVAWSP-DGRRIACGSMDGTISVFDVTRAKFLHHLEG-HFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAM 239 (315)
Q Consensus 162 ~~~~~~~-~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 239 (315)
.+++|.| +++++++++.|+.|++|| ..+....+.. |...+.+++|+| ++. +++++.|+.|++||.+.++.+..+
T Consensus 146 ~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~-~~~-~~~~~~dg~i~i~d~~~~~~~~~~ 221 (313)
T 3odt_A 146 WDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVD-DGH-FISCSNDGLIKLVDMHTGDVLRTY 221 (313)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEE-TTE-EEEEETTSEEEEEETTTCCEEEEE
T ss_pred eEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcC-CCe-EEEccCCCeEEEEECCchhhhhhh
Confidence 8999988 899999999999999999 4455666666 889999999998 444 999999999999999999999999
Q ss_pred ecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeecC
Q 021247 240 SGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 240 ~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
.+|...|.+++|+|++ .|++++.|+.|++||+++++....+..|...|++++|+|++. +++++.||.|++|++.
T Consensus 222 ~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~ 295 (313)
T 3odt_A 222 EGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQE 295 (313)
T ss_dssp ECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESC
T ss_pred hcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCC
Confidence 9999999999999999 589999999999999999999999999999999999999997 7789999999999973
No 37
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.9e-43 Score=300.49 Aligned_cols=279 Identities=15% Similarity=0.160 Sum_probs=217.7
Q ss_pred ccceEEEEEeecCCCCCcEEEEeeCCC-------cEEEEcCCCCcce----------eeccccccceEEEEeCCCCCEEE
Q 021247 14 EESVWAVTWVPATETRPALLLTGSLDE-------TVKLWRPDDMQLE----------RTNTGHCLGVVSVAAHPSGIIAA 76 (315)
Q Consensus 14 ~~~v~~v~~~~~~~~~~~~l~sgs~d~-------~v~~w~~~~~~~~----------~~~~~h~~~v~~~~~~~~g~~l~ 76 (315)
.-+|++++|+|++. +|++||.|. .|++|+.+..... ..+.+|...+.+++++ +..++
T Consensus 14 g~PV~sv~fs~dg~----~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~ 87 (365)
T 4h5i_A 14 GYPAYGAKFLNNDT----LLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIIL 87 (365)
T ss_dssp SSCEEEEEEEETTE----EEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEE
T ss_pred CCCEEEEEEeCCCc----EEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEE
Confidence 44899999999875 789987644 5999987644321 1345677788887764 34444
Q ss_pred E-----------eeCCCeEEEEECCCCcee-E---Eee-----CCcccEEEEEECCCCCeEEE-EecCCCeEEEEecCCc
Q 021247 77 S-----------ASLDSFVRVFDVDTNASI-A---TLE-----ASPSEVWQMQFDPKGTTLAV-AGGGSASVKLWDTATW 135 (315)
Q Consensus 77 s-----------~~~d~~i~~w~~~~~~~~-~---~~~-----~~~~~v~~~~~~~~~~~~~~-~~~~d~~i~~~d~~~~ 135 (315)
+ ++.|+.+|+|++...... . ... .+...+..++|+|+|+++++ +++.|++|++||++++
T Consensus 88 ~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~ 167 (365)
T 4h5i_A 88 VGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL 167 (365)
T ss_dssp EECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT
T ss_pred EEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC
Confidence 4 456888999998765422 1 111 12345889999999998764 4557899999999998
Q ss_pred ceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeee--eecCCccceEEEEEcCCCC
Q 021247 136 NLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLH--HLEGHFMPVRSLVYSPVDP 213 (315)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~ 213 (315)
+.+..+. +...|.+++|+|+|++|++++.+ .+.+|+..+++... ....|...+++++|+| ++
T Consensus 168 ~~~~~~~--------------~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fsp-dg 231 (365)
T 4h5i_A 168 TEKFEIE--------------TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIA-DD 231 (365)
T ss_dssp EEEEEEE--------------CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEE-TT
T ss_pred cEEEEeC--------------CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcC-CC
Confidence 8776653 22348899999999999999855 56666666665443 3456888999999999 67
Q ss_pred cEEEEEeCCC----eEEEEeCCCCee----EEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehc-cccc
Q 021247 214 RVLFSASDDT----HVHMYDAEGKSL----VTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS-MTNH 284 (315)
Q Consensus 214 ~~l~s~~~d~----~i~~wd~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~-~~~~ 284 (315)
.++++++.|+ .+++|+...... ...+.+|...|++++|+|+|++||+|+.|++|+|||+++++++.+ +.+|
T Consensus 232 ~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH 311 (365)
T 4h5i_A 232 TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAH 311 (365)
T ss_dssp EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSS
T ss_pred CEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcc
Confidence 7888888776 688899765532 345678999999999999999999999999999999999998877 4789
Q ss_pred ccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 285 TDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 285 ~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
...|++|+|||||++||++|.|++||||++
T Consensus 312 ~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 312 SFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred cCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 999999999999999999999999999997
No 38
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.4e-42 Score=297.73 Aligned_cols=276 Identities=22% Similarity=0.380 Sum_probs=237.2
Q ss_pred ceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeec--cccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCc
Q 021247 16 SVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTN--TGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA 93 (315)
Q Consensus 16 ~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~--~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~ 93 (315)
.++.|+|++. ++|++| .|++|++||..++++.+.+ .+|...|++++|+|+|.+|++|+.|++|++||+.+++
T Consensus 107 y~~~l~wS~~-----n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~ 180 (420)
T 4gga_A 107 YLNLVDWSSG-----NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 180 (420)
T ss_dssp TCBCEEECTT-----SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred cceeEEECCC-----CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc
Confidence 4677999852 256655 5999999999998876654 4678889999999999999999999999999999999
Q ss_pred eeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCccee-eeecCCCCCCCCCCccCCCCcceEEEEECCCCCE
Q 021247 94 SIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLI-ATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRR 172 (315)
Q Consensus 94 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 172 (315)
.+..+..|...+.++++++. ++++|+.|+.+++||.+..... ..+ ..|...+..+.++|++++
T Consensus 181 ~~~~~~~h~~~v~~~s~~~~---~l~sgs~d~~i~~~d~~~~~~~~~~~-------------~~h~~~~~~~~~~~~g~~ 244 (420)
T 4gga_A 181 RLRNMTSHSARVGSLSWNSY---ILSSGSRSGHIHHHDVRVAEHHVATL-------------SGHSQEVCGLRWAPDGRH 244 (420)
T ss_dssp EEEEECCCSSCEEEEEEETT---EEEEEETTSEEEEEETTSSSCEEEEE-------------ECCSSCEEEEEECTTSSE
T ss_pred EEEEEeCCCCceEEEeeCCC---EEEEEeCCCceeEeeecccceeeEEe-------------cccccceeeeeecCCCCe
Confidence 99999999999999988653 6788999999999998764332 222 234556899999999999
Q ss_pred EEEecCCCcEEEEEcccce----eeeeecCCccceEEEEEcCCCCcEEEEE--eCCCeEEEEeCCCCeeEEEeecccccE
Q 021247 173 IACGSMDGTISVFDVTRAK----FLHHLEGHFMPVRSLVYSPVDPRVLFSA--SDDTHVHMYDAEGKSLVTAMSGHASWV 246 (315)
Q Consensus 173 l~~~s~dg~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~s~--~~d~~i~~wd~~~~~~~~~~~~~~~~i 246 (315)
+++++.|+.+++||..+++ .+.....|...|.+++|+|.+..+++++ +.|++|++||+.++.....+..| ..+
T Consensus 245 l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v 323 (420)
T 4gga_A 245 LASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQV 323 (420)
T ss_dssp EEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCE
T ss_pred eeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cce
Confidence 9999999999999997664 3456678899999999999888888764 47999999999999888877755 468
Q ss_pred EEEEEcCCCCeEEEEe--CCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 247 LSVDASPDGAAITTGS--SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 247 ~~~~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
.++.|+|+++.+++++ .|+.|++||+.+++++.++.+|.+.|++++|+|+|++|+|+|.|++|+|||+
T Consensus 324 ~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 324 CSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp EEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred eeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 8899999999887765 7999999999999999999999999999999999999999999999999986
No 39
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3e-42 Score=296.99 Aligned_cols=281 Identities=18% Similarity=0.315 Sum_probs=241.0
Q ss_pred ccccc--eEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccc-cccceEEEEeCCCCCEEEEeeCCCeEEEEE
Q 021247 12 AHEES--VWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTG-HCLGVVSVAAHPSGIIAASASLDSFVRVFD 88 (315)
Q Consensus 12 ~h~~~--v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~-h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~ 88 (315)
+|.+. +.++.|++ . .+++++.|+.|++|+..+.+....... |...|.+++|+|++.+|++++.||.|++||
T Consensus 89 ~~~~~~~~~~~~~s~--~----~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd 162 (401)
T 4aez_A 89 GIIDDYYLNLLDWSN--L----NVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYD 162 (401)
T ss_dssp TCCCCTTCBCEEECT--T----SEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCcCCceEEEEeecC--C----CEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEE
Confidence 55554 44466654 2 388899999999999988887666554 888999999999999999999999999999
Q ss_pred CCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCC-cceeeeecCCCCCCCCCCccCCCCcceEEEEEC
Q 021247 89 VDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT-WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS 167 (315)
Q Consensus 89 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 167 (315)
+.+++.+..+..|...|.+++|++ . ++++++.|+.|++||++. ...+..+. .|...|.+++|+
T Consensus 163 ~~~~~~~~~~~~~~~~v~~~~~~~--~-~l~~~~~dg~i~i~d~~~~~~~~~~~~-------------~~~~~v~~~~~~ 226 (401)
T 4aez_A 163 VESQTKLRTMAGHQARVGCLSWNR--H-VLSSGSRSGAIHHHDVRIANHQIGTLQ-------------GHSSEVCGLAWR 226 (401)
T ss_dssp TTTCCEEEEECCCSSCEEEEEEET--T-EEEEEETTSEEEEEETTSSSCEEEEEE-------------CCSSCEEEEEEC
T ss_pred CcCCeEEEEecCCCCceEEEEECC--C-EEEEEcCCCCEEEEecccCcceeeEEc-------------CCCCCeeEEEEc
Confidence 999999999999999999999964 3 667889999999999984 33333332 345569999999
Q ss_pred CCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEe--CCCeEEEEeCCCCeeEEEeeccccc
Q 021247 168 PDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSAS--DDTHVHMYDAEGKSLVTAMSGHASW 245 (315)
Q Consensus 168 ~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~--~d~~i~~wd~~~~~~~~~~~~~~~~ 245 (315)
|++++|++|+.|+.|++||+++++....+..|...|.+++|+|.+..++++++ .|+.|++||+++++.+..+. +...
T Consensus 227 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~ 305 (401)
T 4aez_A 227 SDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQ 305 (401)
T ss_dssp TTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSC
T ss_pred CCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCc
Confidence 99999999999999999999999988889999999999999998788888876 79999999999988877775 5678
Q ss_pred EEEEEEcCCCCeEEEE--eCCCcEEEEecCcccee--hcccccccceEEEEEeeCCCEEEEEeCCCcEEEeecC
Q 021247 246 VLSVDASPDGAAITTG--SSDRTVKLWDLNMRAAM--QSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 246 i~~~~~~~~~~~l~s~--~~d~~i~iwd~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
|.+++|+|+++.++++ +.||.|++||+..+... ..+.+|...|.+++|+|+|.+|++++.||+|++|++.
T Consensus 306 v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 306 VTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVY 379 (401)
T ss_dssp EEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECC
T ss_pred EEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 9999999999999984 48999999999885443 3467899999999999999999999999999999973
No 40
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.4e-43 Score=303.36 Aligned_cols=286 Identities=15% Similarity=0.235 Sum_probs=233.5
Q ss_pred hccccceEEEEEee-cCCCCCcEEEEeeCCCcEEEEcCCC---Ccce--eeccccccceEEEEeCCCCCEEEEeeCCCeE
Q 021247 11 NAHEESVWAVTWVP-ATETRPALLLTGSLDETVKLWRPDD---MQLE--RTNTGHCLGVVSVAAHPSGIIAASASLDSFV 84 (315)
Q Consensus 11 ~~h~~~v~~v~~~~-~~~~~~~~l~sgs~d~~v~~w~~~~---~~~~--~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i 84 (315)
.+|++.|++++|+| .+. +|++|+.||+|++|+..+ .... ....+|..+|.+++|+|++.+|++++.|++|
T Consensus 60 ~~h~~~V~~~~~s~~~~~----~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i 135 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETP----YLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQI 135 (437)
T ss_dssp TTTTSCEEEEEEECSSSC----EEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred cCCCCceEEEEECCCCCC----EEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEE
Confidence 78999999999999 654 799999999999999755 3211 1122589999999999999999999999999
Q ss_pred EEEECC---CCceeEEeeC------------CcccEEEEE--ECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCC
Q 021247 85 RVFDVD---TNASIATLEA------------SPSEVWQMQ--FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE 147 (315)
Q Consensus 85 ~~w~~~---~~~~~~~~~~------------~~~~v~~~~--~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~ 147 (315)
++||+. .++....... +...+.++. ++|++. ++++++.|+.|++||+++++.+..+..+
T Consensus 136 ~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~--- 211 (437)
T 3gre_A 136 IVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS-LLVALTNLSRVIIFDIRTLERLQIIENS--- 211 (437)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE-EEEEEETTSEEEEEETTTCCEEEEEECC---
T ss_pred EEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCeeeEEEccC---
Confidence 999995 4544433322 233455555 445555 5578889999999999998887776432
Q ss_pred CCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeec-CCccceEEEEEcCC---CCcEEEEEeCCC
Q 021247 148 GLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLE-GHFMPVRSLVYSPV---DPRVLFSASDDT 223 (315)
Q Consensus 148 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~---~~~~l~s~~~d~ 223 (315)
.|...|.+++|+|++++|++|+.||.|++||+++++.+..+. .|..+|.++.|+|. ++.++++++.|+
T Consensus 212 --------~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg 283 (437)
T 3gre_A 212 --------PRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKT 283 (437)
T ss_dssp --------GGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTE
T ss_pred --------CCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCC
Confidence 134469999999999999999999999999999999888876 78889999988763 567999999999
Q ss_pred eEEEEeCCCCeeEEEeec--------------------------ccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccce
Q 021247 224 HVHMYDAEGKSLVTAMSG--------------------------HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA 277 (315)
Q Consensus 224 ~i~~wd~~~~~~~~~~~~--------------------------~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 277 (315)
.|++||+++++.+..+.+ |...|.+++|+ ++++|++|+.|+.|++||+..++.
T Consensus 284 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~ 362 (437)
T 3gre_A 284 FLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSS 362 (437)
T ss_dssp EEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGG
T ss_pred cEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCccc
Confidence 999999998887766653 55568888998 678999999999999999998876
Q ss_pred ehcccc-------------------------------------cccceEEEEEeeC--CCEEEEEeCCCcEEEee
Q 021247 278 MQSMTN-------------------------------------HTDQVWGVSFRPL--GGRVVSVSDDKSISLYE 313 (315)
Q Consensus 278 ~~~~~~-------------------------------------~~~~v~~~~~s~~--~~~l~s~~~d~~i~i~~ 313 (315)
...+.+ |.+.|++++|+++ +.+|++++.||.|+||+
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 363 SKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 655544 8899999999998 77999999999999995
No 41
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.2e-44 Score=306.58 Aligned_cols=285 Identities=16% Similarity=0.153 Sum_probs=227.2
Q ss_pred hhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCC--cceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEE
Q 021247 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDM--QLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVF 87 (315)
Q Consensus 10 ~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~--~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w 87 (315)
...|.++|++++|+|+++ +|++|+.|+.|++|+..+. +....+.+|..+|.+++|+|++.+|++++.|++|++|
T Consensus 7 ~~~~~~~v~~~~~s~~g~----~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vw 82 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRT----EFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVY 82 (377)
T ss_dssp EEECSSCCSCCEECSSSS----EEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC
T ss_pred EecCCCcEEEEEECCCCC----EEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 345778999999999765 7999999999999999877 6777788999999999999999999999999999999
Q ss_pred ECCCCc---eeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcce---eeeecCCCCCCCCCCccCCCCcce
Q 021247 88 DVDTNA---SIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNL---IATLSIPRPEGLKPTDKSSSKKFV 161 (315)
Q Consensus 88 ~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i 161 (315)
|+.++. ....+..|...|.+++|+|+++.+ ++++.|+.|++||+++.+. ...+. ..|...|
T Consensus 83 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~------------~~h~~~v 149 (377)
T 3dwl_C 83 EKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKF-AVGSGARVISVCYFEQENDWWVSKHLK------------RPLRSTI 149 (377)
T ss_dssp ------CCCCEEECCCCSSCEEEEECCTTSSCC-EEEESSSCEEECCC-----CCCCEEEC------------SSCCSCE
T ss_pred EcCCCCceeeeeEecccCCceEEEEECCCCCEE-EEEecCCeEEEEEECCcccceeeeEee------------cccCCCe
Confidence 999877 566777889999999999998865 5778899999999987652 22221 1155679
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEEcc------------------cceeeeeecCCccceEEEEEcCCCCcEEEEEeCCC
Q 021247 162 LSVAWSPDGRRIACGSMDGTISVFDVT------------------RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 223 (315)
Q Consensus 162 ~~~~~~~~~~~l~~~s~dg~i~i~d~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~ 223 (315)
.+++|+|++++|++++.|+.|++||+. .++.+..+ +|...|.+++|+| ++++|++++.|+
T Consensus 150 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp-~~~~l~~~~~d~ 227 (377)
T 3dwl_C 150 LSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSP-SGNALAYAGHDS 227 (377)
T ss_dssp EEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECT-TSSCEEEEETTT
T ss_pred EEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECC-CCCEEEEEeCCC
Confidence 999999999999999999999999985 34556666 8999999999999 677999999999
Q ss_pred eEEEEeCCCCee----EEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccc-----------------------
Q 021247 224 HVHMYDAEGKSL----VTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRA----------------------- 276 (315)
Q Consensus 224 ~i~~wd~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~----------------------- 276 (315)
.|++||+++++. +..+.+|...|.+++|+|++++|++|+.|+.+ +|+.....
T Consensus 228 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (377)
T 3dwl_C 228 SVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTG 306 (377)
T ss_dssp EEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBC
T ss_pred cEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccc
Confidence 999999988776 67788999999999999999999988766655 66654111
Q ss_pred ----------------eeh-------------cccccccceEEEEEeeCC-C---EEEEEeCCCcEEEeec
Q 021247 277 ----------------AMQ-------------SMTNHTDQVWGVSFRPLG-G---RVVSVSDDKSISLYEY 314 (315)
Q Consensus 277 ----------------~~~-------------~~~~~~~~v~~~~~s~~~-~---~l~s~~~d~~i~i~~~ 314 (315)
... ....|...|+++.+.+.. . .|+|+|.||+|+|||+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 307 EGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp CCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 000 011288999999976653 3 5999999999999985
No 42
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=9.5e-42 Score=287.54 Aligned_cols=252 Identities=21% Similarity=0.311 Sum_probs=220.7
Q ss_pred cceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEE
Q 021247 51 QLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLW 130 (315)
Q Consensus 51 ~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~ 130 (315)
+..+.+.+|..+|.+++|+|++.++++++.|++|++||+.++..+..+..+...|.+++|+|+++.+ ++++.|+.+++|
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~d~~v~iw 124 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV-ACGGLDNICSIY 124 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEE-EEEETTCEEEEE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEE-EEEeCCCeEEEE
Confidence 3456678999999999999999999999999999999999999999999999999999999998855 678899999999
Q ss_pred ecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcC
Q 021247 131 DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210 (315)
Q Consensus 131 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~ 210 (315)
|+.+.+..... ......|...|.++.|++++. +++++.|+.|++||+++++.+..+.+|...|.+++|+|
T Consensus 125 ~~~~~~~~~~~---------~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~ 194 (340)
T 1got_B 125 NLKTREGNVRV---------SRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP 194 (340)
T ss_dssp ETTTCSBSCEE---------EEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred ECccCCCccee---------EEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECC
Confidence 98764311000 001124556799999998765 88999999999999999999999999999999999999
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccc--cccce
Q 021247 211 VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN--HTDQV 288 (315)
Q Consensus 211 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~--~~~~v 288 (315)
+++++++++.|+.|++||++.+..+..+.+|...|.+++|+|++++|++|+.|++|++||++.++.+..+.. +...|
T Consensus 195 -~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v 273 (340)
T 1got_B 195 -DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI 273 (340)
T ss_dssp -TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCE
T ss_pred -CCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccce
Confidence 678999999999999999999999999999999999999999999999999999999999998776655532 33579
Q ss_pred EEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 289 WGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 289 ~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
++++|+|+|++|++++.|++|+|||.
T Consensus 274 ~~~~~s~~g~~l~~g~~d~~i~vwd~ 299 (340)
T 1got_B 274 TSVSFSKSGRLLLAGYDDFNCNVWDA 299 (340)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEEEECCCCCEEEEECCCCeEEEEEc
Confidence 99999999999999999999999996
No 43
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-43 Score=312.22 Aligned_cols=288 Identities=14% Similarity=0.135 Sum_probs=223.0
Q ss_pred ccccceEEEEEeecCCCCC-----cEE-------------------EEeeCCCcEEEEcCCCCcce----eeccccccce
Q 021247 12 AHEESVWAVTWVPATETRP-----ALL-------------------LTGSLDETVKLWRPDDMQLE----RTNTGHCLGV 63 (315)
Q Consensus 12 ~h~~~v~~v~~~~~~~~~~-----~~l-------------------~sgs~d~~v~~w~~~~~~~~----~~~~~h~~~v 63 (315)
.+...|++|+|+|...... .+| ++|+.|++|+||+.++.++. ..+.+|...|
T Consensus 131 ~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V 210 (524)
T 2j04_B 131 NVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEV 210 (524)
T ss_dssp ECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSE
T ss_pred ECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcE
Confidence 3577999999999862211 344 44668899999998766542 2345678899
Q ss_pred EEEEeCCC------CCEEEEeeCCCeEEEEECCCCce-----------eEEeeCCcccEEEEEECCCCCeEEEEecCCCe
Q 021247 64 VSVAAHPS------GIIAASASLDSFVRVFDVDTNAS-----------IATLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126 (315)
Q Consensus 64 ~~~~~~~~------g~~l~s~~~d~~i~~w~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~ 126 (315)
.+++|+|+ +.+|++++.|++|++||+..+.. ...+..|...|.+++|+|.+ .+++|+.|++
T Consensus 211 ~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~--~lasgs~Dgt 288 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT--TVVCGFKNGF 288 (524)
T ss_dssp EEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS--EEEEEETTSE
T ss_pred EEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC--eEEEEeCCCE
Confidence 99999996 57999999999999999987642 23567788999999999864 4688999999
Q ss_pred EEEEecCCccee-eeecCCCCCCCCCCccCCCCcceEEE--EECCCC-CEEEEecCCCcEEEEEcccceeeeeecCCcc-
Q 021247 127 VKLWDTATWNLI-ATLSIPRPEGLKPTDKSSSKKFVLSV--AWSPDG-RRIACGSMDGTISVFDVTRAKFLHHLEGHFM- 201 (315)
Q Consensus 127 i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~-~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~- 201 (315)
|++||+++++.. ..+ ..|...|.++ +|+|++ ++|++|+.|++|++||+++++....+.+|..
T Consensus 289 V~lWD~~~~~~~~~~~-------------~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~ 355 (524)
T 2j04_B 289 VAEFDLTDPEVPSFYD-------------QVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG 355 (524)
T ss_dssp EEEEETTBCSSCSEEE-------------ECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSC
T ss_pred EEEEECCCCCCceEEe-------------ecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccccc
Confidence 999999864221 111 2456679998 578887 8999999999999999998877666666653
Q ss_pred -ceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCcc-----
Q 021247 202 -PVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMR----- 275 (315)
Q Consensus 202 -~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~----- 275 (315)
.|.+++|+| +++.+++++.|++|++||++.+..+..+.+|.+.|++++|+|++++|++|+.|++|++||+..+
T Consensus 356 ~~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~ 434 (524)
T 2j04_B 356 SNLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGI 434 (524)
T ss_dssp CSCCCEEEET-TTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC
T ss_pred CcccceEeCC-CcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhcccc
Confidence 478899999 5667999999999999999988887788899999999999999999999999999999985321
Q ss_pred ---------------------------------------ceehcccccccceEEEEEeeCCC---EEEEEeCCCcEEEee
Q 021247 276 ---------------------------------------AAMQSMTNHTDQVWGVSFRPLGG---RVVSVSDDKSISLYE 313 (315)
Q Consensus 276 ---------------------------------------~~~~~~~~~~~~v~~~~~s~~~~---~l~s~~~d~~i~i~~ 313 (315)
..+.++.+|...|++|+|+|++. .+|+++.||+|+||+
T Consensus 435 ~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~ 514 (524)
T 2j04_B 435 KNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEY 514 (524)
T ss_dssp ------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEE
T ss_pred ccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEE
Confidence 01122345778899999999964 899999999999999
Q ss_pred cC
Q 021247 314 YS 315 (315)
Q Consensus 314 ~~ 315 (315)
+.
T Consensus 515 l~ 516 (524)
T 2j04_B 515 LS 516 (524)
T ss_dssp CS
T ss_pred cc
Confidence 73
No 44
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5e-43 Score=305.00 Aligned_cols=286 Identities=17% Similarity=0.229 Sum_probs=225.8
Q ss_pred hhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcc--eeeccccccceEEEEeCC-CCCEEEEeeCCCeEEE
Q 021247 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQL--ERTNTGHCLGVVSVAAHP-SGIIAASASLDSFVRV 86 (315)
Q Consensus 10 ~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~--~~~~~~h~~~v~~~~~~~-~g~~l~s~~~d~~i~~ 86 (315)
..+|+..|++|+|+|... .+||+|+.||.|++||..+.+. .....+|..+|.+++|+| ++.+|++++.|++|++
T Consensus 115 ~~~~~~~V~~l~~~P~~~---~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHP---STVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp EEECSSCEEEEEECSSCT---TCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred CCCCCCCEEEEEEeCCCC---CEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 457889999999999654 3799999999999999876553 334568999999999998 6899999999999999
Q ss_pred EECCCCceeEEeeCC--cccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEE
Q 021247 87 FDVDTNASIATLEAS--PSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSV 164 (315)
Q Consensus 87 w~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 164 (315)
||++++........+ ...+.+++|+|++..+ ++|+.|+.|++||++.. .+.. ...|...|.++
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~g~~dg~i~~wd~~~~-~~~~-------------~~~h~~~v~~v 256 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMV-VTGDNVGNVILLNMDGK-ELWN-------------LRMHKKKVTHV 256 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTEE-EEECSSSBEEEEESSSC-BCCC-------------SBCCSSCEEEE
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCEE-EEEeCCCcEeeeccCcc-eeEE-------------EecccceEEee
Confidence 999876543333322 3457789999998854 67889999999998642 2221 23456679999
Q ss_pred EECCCCC-EEEEecCCCcEEEEEcccceeeee---ecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEee
Q 021247 165 AWSPDGR-RIACGSMDGTISVFDVTRAKFLHH---LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS 240 (315)
Q Consensus 165 ~~~~~~~-~l~~~s~dg~i~i~d~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 240 (315)
+|+|++. +|++|+.|+.|++||+++.+.... ..+|..+|++++|+| ++.+|++++.|+.|++||...+.....+.
T Consensus 257 ~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~l~s~~~D~~i~iwd~~~~~~~~~~~ 335 (435)
T 4e54_B 257 ALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP-DGARLLTTDQKSEIRVYSASQWDCPLGLI 335 (435)
T ss_dssp EECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT-TSSEEEEEESSSCEEEEESSSSSSEEEEC
T ss_pred eecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECC-CCCeeEEEcCCCEEEEEECCCCccceEEe
Confidence 9999876 678899999999999987664433 357899999999999 67899999999999999999887776665
Q ss_pred cccc------cEEEEEEcCCCCeEEEEe------------CCCcEEEEecCccceehcc-cccccceEEE-EEeeCCCEE
Q 021247 241 GHAS------WVLSVDASPDGAAITTGS------------SDRTVKLWDLNMRAAMQSM-TNHTDQVWGV-SFRPLGGRV 300 (315)
Q Consensus 241 ~~~~------~i~~~~~~~~~~~l~s~~------------~d~~i~iwd~~~~~~~~~~-~~~~~~v~~~-~~s~~~~~l 300 (315)
.|.. .+....|+|++.++++++ .++.|++||..+++.+.++ .+|...|.++ +|+|+|.+|
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~l 415 (435)
T 4e54_B 336 PHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTL 415 (435)
T ss_dssp CCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCE
T ss_pred cccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEE
Confidence 5532 233456777776666654 3467999999998887665 4677888887 699999999
Q ss_pred EEEeCCCcEEEeecC
Q 021247 301 VSVSDDKSISLYEYS 315 (315)
Q Consensus 301 ~s~~~d~~i~i~~~~ 315 (315)
++++ |++|+||++.
T Consensus 416 asg~-d~~i~iW~~~ 429 (435)
T 4e54_B 416 ASAM-GYHILIWSQQ 429 (435)
T ss_dssp EEEC-SSEEEECCCC
T ss_pred EEEc-CCcEEEEECC
Confidence 8876 7899999863
No 45
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=9.8e-42 Score=282.12 Aligned_cols=248 Identities=21% Similarity=0.381 Sum_probs=207.2
Q ss_pred eccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCC--ceeEEeeCCcccEEEEEECCC--CCeEEEEecCCCeEEEE
Q 021247 55 TNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN--ASIATLEASPSEVWQMQFDPK--GTTLAVAGGGSASVKLW 130 (315)
Q Consensus 55 ~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~ 130 (315)
.+.+|...|.+++|+|+|++|++++.|++|++||+... +.+.++..|..+|++++|+|. ++ ++++++.|++|++|
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~-~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGKVMIW 82 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTTEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCC-EEEEEcCCCEEEEE
Confidence 45689999999999999999999999999999999753 567888999999999999864 44 56889999999999
Q ss_pred ecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCC--CCEEEEecCCCcEEEEEccccee--eeeecCCccceEEE
Q 021247 131 DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD--GRRIACGSMDGTISVFDVTRAKF--LHHLEGHFMPVRSL 206 (315)
Q Consensus 131 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~s~dg~i~i~d~~~~~~--~~~~~~~~~~v~~~ 206 (315)
|+++++..... ....|...|.+++|+|+ +.+|++++.|+.|++||++++.. ...+.+|...|.++
T Consensus 83 d~~~~~~~~~~-----------~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~ 151 (297)
T 2pm7_B 83 KEENGRWSQIA-----------VHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSA 151 (297)
T ss_dssp EBSSSCBCCCE-----------EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEE
T ss_pred EcCCCceEEEE-----------EeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceE
Confidence 99865321111 11234566999999997 88999999999999999986532 35567899999999
Q ss_pred EEcCCC------------CcEEEEEeCCCeEEEEeCCCCe----eEEEeecccccEEEEEEcCCC---CeEEEEeCCCcE
Q 021247 207 VYSPVD------------PRVLFSASDDTHVHMYDAEGKS----LVTAMSGHASWVLSVDASPDG---AAITTGSSDRTV 267 (315)
Q Consensus 207 ~~~~~~------------~~~l~s~~~d~~i~~wd~~~~~----~~~~~~~~~~~i~~~~~~~~~---~~l~s~~~d~~i 267 (315)
+|+|.. +++|++|+.|+.|++||.+.+. +...+.+|...|.+++|+|++ .+|++++.|++|
T Consensus 152 ~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v 231 (297)
T 2pm7_B 152 SWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTC 231 (297)
T ss_dssp EECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCE
T ss_pred eecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcE
Confidence 999852 4689999999999999987654 556788999999999999984 799999999999
Q ss_pred EEEecCccc---eehcc--cccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 268 KLWDLNMRA---AMQSM--TNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 268 ~iwd~~~~~---~~~~~--~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
++||++... ....+ ..|...|++++|+|+|++|++++.|++|+||+.
T Consensus 232 ~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~ 283 (297)
T 2pm7_B 232 IIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (297)
T ss_dssp EEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred EEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence 999997642 11122 467889999999999999999999999999985
No 46
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.2e-43 Score=299.17 Aligned_cols=268 Identities=24% Similarity=0.309 Sum_probs=229.4
Q ss_pred CcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEE
Q 021247 40 ETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAV 119 (315)
Q Consensus 40 ~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 119 (315)
..+..|++.+..+.+.+.+|...|.+++|+|++.+|++|+.|++|++||+.+++....+..|...|.+++|+|+++.+ +
T Consensus 46 ~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~l-a 124 (380)
T 3iz6_a 46 RTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSV-A 124 (380)
T ss_dssp GGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEE-E
T ss_pred ccccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEE-E
Confidence 445568877777888899999999999999999999999999999999999999999999999999999999998865 6
Q ss_pred EecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCC-CCEEEEecCCCcEEEEEcccceeeeee--
Q 021247 120 AGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD-GRRIACGSMDGTISVFDVTRAKFLHHL-- 196 (315)
Q Consensus 120 ~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~s~dg~i~i~d~~~~~~~~~~-- 196 (315)
+|+.|+.+++||+.+..... ...........|...+.++.|.|+ +..|++|+.|+.|++||+++++.+..+
T Consensus 125 s~~~d~~v~iw~~~~~~~~~------~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~ 198 (380)
T 3iz6_a 125 CGGLDSACSIFNLSSQADRD------GNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGS 198 (380)
T ss_dssp ECCSSSCCEEEECCCCSSCC------CSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECC
T ss_pred EeeCCCcEEEEECCCCcccc------CCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeec
Confidence 88999999999986532110 000011123456777889999996 457999999999999999999887766
Q ss_pred ---cCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCC-CCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEec
Q 021247 197 ---EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272 (315)
Q Consensus 197 ---~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~ 272 (315)
.+|...|.++.|+|.++.++++|+.|+.|++||++ ....+..+.+|...|.+++|+|++++|++|+.|++|++||+
T Consensus 199 ~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~ 278 (380)
T 3iz6_a 199 EFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDM 278 (380)
T ss_dssp CSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEET
T ss_pred ccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEEC
Confidence 67899999999998788999999999999999997 45677788999999999999999999999999999999999
Q ss_pred Cccceehcccccc-------cceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 273 NMRAAMQSMTNHT-------DQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 273 ~~~~~~~~~~~~~-------~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
++++.+..+..+. ..|++++|+|+|++|++++.||.|+|||.
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~ 327 (380)
T 3iz6_a 279 RTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDT 327 (380)
T ss_dssp TTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEET
T ss_pred CCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEEC
Confidence 9988776654432 34889999999999999999999999995
No 47
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=6.2e-41 Score=279.38 Aligned_cols=276 Identities=21% Similarity=0.356 Sum_probs=231.3
Q ss_pred eEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeec--cccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCce
Q 021247 17 VWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTN--TGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNAS 94 (315)
Q Consensus 17 v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~--~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~ 94 (315)
.++|+|+|. .+|++ +.|++|++||.+++++.+.+ .+|...|.+++|+|+|+++++|+.|++|++|++++++.
T Consensus 28 ~~~l~WS~~-----~~lAv-g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~ 101 (318)
T 4ggc_A 28 LNLVDWSSG-----NVLAV-ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR 101 (318)
T ss_dssp CBCEEECTT-----SEEEE-EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred ceEEEECCC-----CEEEE-EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCcee
Confidence 578999863 25655 46999999999998877654 46788899999999999999999999999999999999
Q ss_pred eEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEE
Q 021247 95 IATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIA 174 (315)
Q Consensus 95 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 174 (315)
+..+..|...+..+.+.+ . ++++++.++.+++|+.......... ...|...+..+.+++++++|+
T Consensus 102 ~~~~~~h~~~~~~~~~~~--~-~l~s~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~ 166 (318)
T 4ggc_A 102 LRNMTSHSARVGSLSWNS--Y-ILSSGSRSGHIHHHDVRVAEHHVAT------------LSGHSQEVCGLRWAPDGRHLA 166 (318)
T ss_dssp EEEEECCSSCEEEEEEET--T-EEEEEETTSEEEEEETTSSSCEEEE------------EECCSSCEEEEEECTTSSEEE
T ss_pred EEEecCccceEEEeecCC--C-EEEEEecCCceEeeecCCCceeEEE------------EcCccCceEEEEEcCCCCEEE
Confidence 999999998888777654 3 6678899999999998764332211 123455688999999999999
Q ss_pred EecCCCcEEEEEccccee----eeeecCCccceEEEEEcCCCCcEEE--EEeCCCeEEEEeCCCCeeEEEeecccccEEE
Q 021247 175 CGSMDGTISVFDVTRAKF----LHHLEGHFMPVRSLVYSPVDPRVLF--SASDDTHVHMYDAEGKSLVTAMSGHASWVLS 248 (315)
Q Consensus 175 ~~s~dg~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~--s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~ 248 (315)
+++.|+.|++||+++++. ......+...|..+.++|.++..+. +++.++.|++||.+........ .+...+..
T Consensus 167 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~ 245 (318)
T 4ggc_A 167 SGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCS 245 (318)
T ss_dssp EEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEE
T ss_pred EEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeee
Confidence 999999999999987653 3445667889999999997777654 5667899999999887665544 46677899
Q ss_pred EEEcCCCCeEEEEe--CCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 249 VDASPDGAAITTGS--SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 249 ~~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
+.++|++..+++++ .|+.|++||+++++.+.++.+|.+.|++++|+|+|++|+++|.||+|+|||+
T Consensus 246 ~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 246 ILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp EEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred eeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 99999998877654 7999999999999999999999999999999999999999999999999996
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.7e-41 Score=290.01 Aligned_cols=299 Identities=15% Similarity=0.176 Sum_probs=242.8
Q ss_pred hhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEEC
Q 021247 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDV 89 (315)
Q Consensus 10 ~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~ 89 (315)
...| ..+....|+|.+. +|++|+.||.|++|+..+.+....+.+|...|.+++|+|++.+|++++.|++|++||+
T Consensus 94 ~~~~-~~~~~~~~~~~~~----~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~ 168 (420)
T 3vl1_A 94 LKRA-DYTAVDTAKLQMR----RFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSV 168 (420)
T ss_dssp SCSC-CEEEEEEECSSSC----EEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EecC-CceEEEEEecCCC----EEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 3444 3344445666554 7999999999999999988888888899999999999999999999999999999999
Q ss_pred CCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCC-----------CCccCCCC
Q 021247 90 DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK-----------PTDKSSSK 158 (315)
Q Consensus 90 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 158 (315)
.+++.+..+..|...|.+++|+|+++.+ ++++.|++|++||+++++.+..+..+...... ......+.
T Consensus 169 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 247 (420)
T 3vl1_A 169 KDGSNPRTLIGHRATVTDIAIIDRGRNV-LSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEIST 247 (420)
T ss_dssp TTCCCCEEEECCSSCEEEEEEETTTTEE-EEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCC
T ss_pred CCCcCceEEcCCCCcEEEEEEcCCCCEE-EEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeeccc
Confidence 9999999999999999999999998865 57889999999999998888777543211000 00011123
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeec-CCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe-eE
Q 021247 159 KFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLE-GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKS-LV 236 (315)
Q Consensus 159 ~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~-~~ 236 (315)
..+.+++|+|++++|++|+.||.|++||+++++....+. .|...|.+++|+|.+..++++++.|+.|++||++.+. .+
T Consensus 248 ~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~ 327 (420)
T 3vl1_A 248 SKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPV 327 (420)
T ss_dssp CCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCS
T ss_pred CcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCch
Confidence 446677889999999999999999999999888766664 5788999999999655599999999999999998764 35
Q ss_pred EEeec-ccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccce---------ehcccccccceEEEEEeeCCC---EEEEE
Q 021247 237 TAMSG-HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA---------MQSMTNHTDQVWGVSFRPLGG---RVVSV 303 (315)
Q Consensus 237 ~~~~~-~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~---------~~~~~~~~~~v~~~~~s~~~~---~l~s~ 303 (315)
..+.. |...|.++.+ +++++|++++.|+.|++|++..... ...+..|...+.+++|+|++. .|+++
T Consensus 328 ~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~ 406 (420)
T 3vl1_A 328 GEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEV 406 (420)
T ss_dssp EEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEE
T ss_pred hhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEE
Confidence 66665 6677887755 5778999999999999999876321 122456778999999999999 89999
Q ss_pred eCCCcEEEeecC
Q 021247 304 SDDKSISLYEYS 315 (315)
Q Consensus 304 ~~d~~i~i~~~~ 315 (315)
+.+|.+.+|+++
T Consensus 407 g~~g~~~~~~~~ 418 (420)
T 3vl1_A 407 GKNNFCALYNLS 418 (420)
T ss_dssp ETTTEEEEEESC
T ss_pred cCCceEEEEecc
Confidence 999999999874
No 49
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.3e-41 Score=329.18 Aligned_cols=288 Identities=24% Similarity=0.371 Sum_probs=253.5
Q ss_pred hhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEE
Q 021247 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFD 88 (315)
Q Consensus 9 ~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~ 88 (315)
+..+|.+.|++++|+|++. ++++|+.||+|++|+..+.+....+.+|...|.+++|+|+|.++++++.|++|++||
T Consensus 610 ~~~~h~~~v~~~~~s~~~~----~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd 685 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQ----RIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWD 685 (1249)
T ss_dssp EECCCSSCEEEEEECTTSS----EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEecccccEEEEEECCCCC----EEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence 3468999999999999775 799999999999999999988888999999999999999999999999999999999
Q ss_pred CCCCceeEEeeCCcccEEEEEECCCC-CeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEEC
Q 021247 89 VDTNASIATLEASPSEVWQMQFDPKG-TTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS 167 (315)
Q Consensus 89 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 167 (315)
+.+++.+..+..|...|.+++|+|++ ..++++++.|+.|++||+++++.+..+. .|...|.+++|+
T Consensus 686 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~-------------~h~~~v~~~~~s 752 (1249)
T 3sfz_A 686 SATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF-------------GHTNSVNHCRFS 752 (1249)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEEC-------------CCSSCEEEEEEC
T ss_pred CCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheec-------------CCCCCEEEEEEe
Confidence 99999999999999999999999964 3467788999999999999888776653 345569999999
Q ss_pred CCCCEEEEecCCCcEEEEEcccceeeeee---------------------------------------------------
Q 021247 168 PDGRRIACGSMDGTISVFDVTRAKFLHHL--------------------------------------------------- 196 (315)
Q Consensus 168 ~~~~~l~~~s~dg~i~i~d~~~~~~~~~~--------------------------------------------------- 196 (315)
|++++|++++.||.|++||+.+++....+
T Consensus 753 p~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~ 832 (1249)
T 3sfz_A 753 PDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLL 832 (1249)
T ss_dssp SSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEE
T ss_pred cCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCce
Confidence 99999999999999999999776543222
Q ss_pred ----cCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEec
Q 021247 197 ----EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272 (315)
Q Consensus 197 ----~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~ 272 (315)
.+|...+.+++|+| ++.++++++.|+.|++||..++..+..+.+|...|.+++|+|+++.|++++.|+.|++|++
T Consensus 833 ~~~~~~~~~~v~~~~~sp-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 833 AEIHTGHHSTIQYCDFSP-YDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWET 911 (1249)
T ss_dssp EEEECSSSSCCCEEEECS-STTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEH
T ss_pred eEEcCCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 15677889999998 6789999999999999999999999999999999999999999999999999999999985
Q ss_pred Cc------------------------------------------------------------------------------
Q 021247 273 NM------------------------------------------------------------------------------ 274 (315)
Q Consensus 273 ~~------------------------------------------------------------------------------ 274 (315)
..
T Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~ 991 (1249)
T 3sfz_A 912 KKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELP 991 (1249)
T ss_dssp HHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETT
T ss_pred cccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcC
Confidence 42
Q ss_pred -cceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 275 -RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 275 -~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
++....+.+|...|++++|+|+|++|++++.||+|++|++
T Consensus 992 ~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~ 1032 (1249)
T 3sfz_A 992 NNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNW 1032 (1249)
T ss_dssp TTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEET
T ss_pred CCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 1222334568889999999999999999999999999996
No 50
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.3e-42 Score=297.48 Aligned_cols=280 Identities=18% Similarity=0.162 Sum_probs=235.2
Q ss_pred cceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCce
Q 021247 15 ESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNAS 94 (315)
Q Consensus 15 ~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~ 94 (315)
+.+++++|+|.+. +|++|+.|+.|++|+..+.+....+..| ..+....+++++.+|++++.|+.|++||+.+++.
T Consensus 57 ~~~~~~~~s~~g~----~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 131 (420)
T 3vl1_A 57 DAGKGNTFEKVGS----HLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQ 131 (420)
T ss_dssp BCCTTCEEEEEET----TEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEE
T ss_pred ccccceeeeecCC----eEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcce
Confidence 3455889999876 5999999999999999877766666666 4445557899999999999999999999999888
Q ss_pred eEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEE
Q 021247 95 IATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIA 174 (315)
Q Consensus 95 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 174 (315)
...+..|...|.+++|+|+++. +++++.|++|++||+++++.+..+. .|...|.+++|+|++++|+
T Consensus 132 ~~~~~~h~~~v~~~~~~~~~~~-l~s~s~d~~i~iwd~~~~~~~~~~~-------------~h~~~v~~~~~~~~~~~l~ 197 (420)
T 3vl1_A 132 REIDQAHVSEITKLKFFPSGEA-LISSSQDMQLKIWSVKDGSNPRTLI-------------GHRATVTDIAIIDRGRNVL 197 (420)
T ss_dssp EEETTSSSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTCCCCEEEE-------------CCSSCEEEEEEETTTTEEE
T ss_pred eeecccccCccEEEEECCCCCE-EEEEeCCCeEEEEeCCCCcCceEEc-------------CCCCcEEEEEEcCCCCEEE
Confidence 8888889999999999999885 4678899999999999877665553 3455699999999999999
Q ss_pred EecCCCcEEEEEcccceeeeeecC---CccceEEEEE---------------------cCCCCcEEEEEeCCCeEEEEeC
Q 021247 175 CGSMDGTISVFDVTRAKFLHHLEG---HFMPVRSLVY---------------------SPVDPRVLFSASDDTHVHMYDA 230 (315)
Q Consensus 175 ~~s~dg~i~i~d~~~~~~~~~~~~---~~~~v~~~~~---------------------~~~~~~~l~s~~~d~~i~~wd~ 230 (315)
+++.|+.|++||+++++.+..+.. +...+.++.| +| +++++++++.|+.|++||+
T Consensus 198 s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~ 276 (420)
T 3vl1_A 198 SASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGHVSGVITVHNV 276 (420)
T ss_dssp EEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-TTEEEEEEETTSCEEEEET
T ss_pred EEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC-CCCEEEEEcCCCeEEEEEC
Confidence 999999999999999988887764 4445555555 55 6779999999999999999
Q ss_pred CCCeeEEEe-ecccccEEEEEEcCCCC-eEEEEeCCCcEEEEecCccce-ehcccc-cccceEEEEEeeCCCEEEEEeCC
Q 021247 231 EGKSLVTAM-SGHASWVLSVDASPDGA-AITTGSSDRTVKLWDLNMRAA-MQSMTN-HTDQVWGVSFRPLGGRVVSVSDD 306 (315)
Q Consensus 231 ~~~~~~~~~-~~~~~~i~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~-~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d 306 (315)
+.++.+..+ ..|...|.+++|+|+++ +|++|+.||.|++||++.++. +..+.. |...+.++. .+++++|++++.|
T Consensus 277 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~l~s~~~d 355 (420)
T 3vl1_A 277 FSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVY-FAAGALFVSSGFD 355 (420)
T ss_dssp TTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEE-EETTEEEEEETTT
T ss_pred CCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEE-eCCCCEEEEecCC
Confidence 988766655 45888999999999998 999999999999999998654 666665 666787774 5678899999999
Q ss_pred CcEEEeecC
Q 021247 307 KSISLYEYS 315 (315)
Q Consensus 307 ~~i~i~~~~ 315 (315)
++|+||++.
T Consensus 356 ~~v~iw~~~ 364 (420)
T 3vl1_A 356 TSIKLDIIS 364 (420)
T ss_dssp EEEEEEEEC
T ss_pred ccEEEEecc
Confidence 999999963
No 51
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.9e-41 Score=280.42 Aligned_cols=250 Identities=22% Similarity=0.301 Sum_probs=208.1
Q ss_pred hhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCC--CcceeeccccccceEEEEeCCC--CCEEEEeeCCCeE
Q 021247 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD--MQLERTNTGHCLGVVSVAAHPS--GIIAASASLDSFV 84 (315)
Q Consensus 9 ~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~--~~~~~~~~~h~~~v~~~~~~~~--g~~l~s~~~d~~i 84 (315)
++.+|++.|++++|+|+++ +|++|+.|++|++|+... .+....+.+|..+|.+++|++. |.+|++++.|++|
T Consensus 4 ~~~~h~~~V~~~~~s~~g~----~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGK----RMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp ECCSCSSCEEEEEECTTSS----EEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred eccCCcCceEEEEECCCCC----EEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 4578999999999999875 799999999999999864 3566778899999999999864 8999999999999
Q ss_pred EEEECCCCc--eeEEeeCCcccEEEEEECCC--CCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcc
Q 021247 85 RVFDVDTNA--SIATLEASPSEVWQMQFDPK--GTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKF 160 (315)
Q Consensus 85 ~~w~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (315)
++||+.++. .+..+..|...|.+++|+|+ +. ++++++.|++|++||++....... .....|...
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~-----------~~~~~h~~~ 147 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTSP-----------IIIDAHAIG 147 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBCC-----------EEEECCSSC
T ss_pred EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCceee-----------eeeecccCc
Confidence 999998874 45667778899999999997 55 557889999999999976432110 111235556
Q ss_pred eEEEEECCC-------------CCEEEEecCCCcEEEEEcccce----eeeeecCCccceEEEEEcCCC--CcEEEEEeC
Q 021247 161 VLSVAWSPD-------------GRRIACGSMDGTISVFDVTRAK----FLHHLEGHFMPVRSLVYSPVD--PRVLFSASD 221 (315)
Q Consensus 161 i~~~~~~~~-------------~~~l~~~s~dg~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~ 221 (315)
|.+++|+|+ +++|++|+.|+.|++||+++++ ....+.+|...|++++|+|.. +.+|++++.
T Consensus 148 v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~ 227 (297)
T 2pm7_B 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQ 227 (297)
T ss_dssp EEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred cceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEEC
Confidence 999999996 5799999999999999998655 556788999999999999964 589999999
Q ss_pred CCeEEEEeCCCCe---eEEEe--ecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCc
Q 021247 222 DTHVHMYDAEGKS---LVTAM--SGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274 (315)
Q Consensus 222 d~~i~~wd~~~~~---~~~~~--~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 274 (315)
|++|++||.+... ....+ ..|...|.+++|+|++++|++++.|++|++|+...
T Consensus 228 D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 228 DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 9999999987532 12223 46788999999999999999999999999999763
No 52
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=7.4e-41 Score=283.53 Aligned_cols=256 Identities=22% Similarity=0.267 Sum_probs=222.3
Q ss_pred cceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEE
Q 021247 51 QLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLW 130 (315)
Q Consensus 51 ~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~ 130 (315)
+..+.+.+|...|.+++|+|++.+|++++.|++|++||..++.....+..+...|.+++|+|++..+ ++++.|+.+++|
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~l-asg~~d~~i~v~ 133 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAI-ACGGLDNKCSVY 133 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEE-EEESTTSEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEE-EEeeCCCCEEEE
Confidence 4456778999999999999999999999999999999999998888888888899999999999865 678999999999
Q ss_pred ecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcC
Q 021247 131 DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210 (315)
Q Consensus 131 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~ 210 (315)
++...+..... ........|...|.+++|+|++..|++++.|+.|++||+++++.+..+.+|...|.++.|+|
T Consensus 134 ~~~~~~~~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~ 206 (354)
T 2pbi_B 134 PLTFDKNENMA-------AKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAP 206 (354)
T ss_dssp ECCCCTTCCSG-------GGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECC
T ss_pred EEecccccccc-------ccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEe
Confidence 98643210000 00011224666799999999999999999999999999999999999999999999999998
Q ss_pred C-CCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehccccc--ccc
Q 021247 211 V-DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNH--TDQ 287 (315)
Q Consensus 211 ~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--~~~ 287 (315)
. ++.+|++|+.|+.|++||+++++.+..+.+|...|.+++|+|++.+|++|+.|++|++||++..+.+..+..+ ...
T Consensus 207 ~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~ 286 (354)
T 2pbi_B 207 SETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFG 286 (354)
T ss_dssp CSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSC
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccc
Confidence 5 4579999999999999999999999999999999999999999999999999999999999987665554433 347
Q ss_pred eEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 288 VWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 288 v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
+.+++|+|+|.+|++++.|++|+|||+
T Consensus 287 ~~~~~~s~~g~~l~~g~~d~~i~vwd~ 313 (354)
T 2pbi_B 287 ASSVDFSLSGRLLFAGYNDYTINVWDV 313 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eeEEEEeCCCCEEEEEECCCcEEEEEC
Confidence 899999999999999999999999996
No 53
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=8.3e-41 Score=302.67 Aligned_cols=299 Identities=15% Similarity=0.232 Sum_probs=245.8
Q ss_pred hhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeecccccc---ceEEEEeCCC-CCEEEEeeCCCeEE
Q 021247 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCL---GVVSVAAHPS-GIIAASASLDSFVR 85 (315)
Q Consensus 10 ~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~---~v~~~~~~~~-g~~l~s~~~d~~i~ 85 (315)
..+|...|++++|+|.++ .++++|+.|+.|++|+..+.+....+.+|.. .|.+++|+|+ +.++++++.|+.|+
T Consensus 156 ~~~~~~~v~~~~~~~~~~---~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 232 (615)
T 1pgu_A 156 VSGHSQRINACHLKQSRP---MRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKIS 232 (615)
T ss_dssp CCSCSSCEEEEEECSSSS---CEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEE
T ss_pred eecCCccEEEEEECCCCC---cEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEE
Confidence 468999999999999764 2799999999999999998888888889999 9999999999 99999999999999
Q ss_pred EEECCCCceeEEe-e---CCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCC--------------
Q 021247 86 VFDVDTNASIATL-E---ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE-------------- 147 (315)
Q Consensus 86 ~w~~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-------------- 147 (315)
+||+.+++.+..+ . .|...|.+++|+ ++.. +++++.|+.|++||+++++.+..+..+...
T Consensus 233 vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~-l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (615)
T 1pgu_A 233 CFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQK-FATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNG 310 (615)
T ss_dssp EEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSE-EEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETT
T ss_pred EEECCCCCEeEEecccccccCCceEEEEEc-CCCE-EEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCC
Confidence 9999999998888 5 788999999999 7665 567888999999999987766555433100
Q ss_pred ------------------CCCCCcc---------------------------------CCCCcceEEEEE----------
Q 021247 148 ------------------GLKPTDK---------------------------------SSSKKFVLSVAW---------- 166 (315)
Q Consensus 148 ------------------~~~~~~~---------------------------------~~~~~~i~~~~~---------- 166 (315)
....... ..+...|.+++|
T Consensus 311 ~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~ 390 (615)
T 1pgu_A 311 RIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSIS 390 (615)
T ss_dssp EEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEE
T ss_pred eEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEe
Confidence 0000000 011122222222
Q ss_pred ------------------------CCC--------------------------------------CCEEEEecC-CCcEE
Q 021247 167 ------------------------SPD--------------------------------------GRRIACGSM-DGTIS 183 (315)
Q Consensus 167 ------------------------~~~--------------------------------------~~~l~~~s~-dg~i~ 183 (315)
+|+ +++|++++. |+.|+
T Consensus 391 ~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~ 470 (615)
T 1pgu_A 391 WDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQ 470 (615)
T ss_dssp TTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEE
T ss_pred CCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEE
Confidence 111 455666666 77777
Q ss_pred EEEcccceee-eeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeec-ccccEEEEEEcC--------
Q 021247 184 VFDVTRAKFL-HHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSG-HASWVLSVDASP-------- 253 (315)
Q Consensus 184 i~d~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~-~~~~i~~~~~~~-------- 253 (315)
+||+.+++.. ..+..|...|.+++|+| ++++|++++.|+.|++||++.++.+..+.+ |...|++++|+|
T Consensus 471 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~ 549 (615)
T 1pgu_A 471 VFKLSDLEVSFDLKTPLRAKPSYISISP-SETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEE 549 (615)
T ss_dssp EEETTEEEEEEECSSCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------
T ss_pred EEECCCccccccccCCccCceEEEEECC-CCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCcccccccc
Confidence 7777666554 56677899999999998 678999999999999999999998888887 999999999999
Q ss_pred --CCCeEEEEeCCCcEEEEecCcc-ceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeecC
Q 021247 254 --DGAAITTGSSDRTVKLWDLNMR-AAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 254 --~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
++++|++++.|+.|++||+..+ +.+..+.+|...|++++|+|++. |++++.||+|++|++.
T Consensus 550 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 550 EIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC
T ss_pred ccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeee
Confidence 9999999999999999999987 67888899999999999999999 9999999999999974
No 54
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.7e-41 Score=315.58 Aligned_cols=293 Identities=23% Similarity=0.351 Sum_probs=258.7
Q ss_pred cchhhhhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCe
Q 021247 4 AGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSF 83 (315)
Q Consensus 4 ~~~~~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~ 83 (315)
+.+.....+|.+.|++++|+|+++ +|++|+.||.|++|+..+++....+.+|..+|.++.|+|++.+|++++.|+.
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp~~~----~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 78 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHPTEP----WVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFR 78 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSS----EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSE
T ss_pred cccceeeecCCCceEEEEECCCCC----EEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCe
Confidence 445566789999999999999775 7999999999999999998888888899999999999999999999999999
Q ss_pred EEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCc-ceeeeecCCCCCCCCCCccCCCCcceE
Q 021247 84 VRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATW-NLIATLSIPRPEGLKPTDKSSSKKFVL 162 (315)
Q Consensus 84 i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~ 162 (315)
|++||+.+++.+..+..|...|.+++|+|+++.+ ++++.|+.|++||+.+. .....+. .+...|.
T Consensus 79 i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~vw~~~~~~~~~~~~~-------------~~~~~v~ 144 (814)
T 3mkq_A 79 IRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYV-LSGSDDLTVKLWNWENNWALEQTFE-------------GHEHFVM 144 (814)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEE-EEEETTSEEEEEEGGGTSEEEEEEE-------------CCSSCEE
T ss_pred EEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEE-EEEcCCCEEEEEECCCCceEEEEEc-------------CCCCcEE
Confidence 9999999999999999999999999999999865 57889999999999875 3333332 2445699
Q ss_pred EEEECC-CCCEEEEecCCCcEEEEEcccceeeeeecCCc-cceEEEEEcCC-CCcEEEEEeCCCeEEEEeCCCCeeEEEe
Q 021247 163 SVAWSP-DGRRIACGSMDGTISVFDVTRAKFLHHLEGHF-MPVRSLVYSPV-DPRVLFSASDDTHVHMYDAEGKSLVTAM 239 (315)
Q Consensus 163 ~~~~~~-~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 239 (315)
+++|+| +++.|++++.||.|++||+.+++....+..+. ..+..+.|+|. ++.++++++.|+.|++||.+.++.+..+
T Consensus 145 ~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 224 (814)
T 3mkq_A 145 CVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL 224 (814)
T ss_dssp EEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEE
Confidence 999999 88899999999999999998887766666554 88999999983 5679999999999999999999999999
Q ss_pred ecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCE-EEEEeCCCcEEEeec
Q 021247 240 SGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGR-VVSVSDDKSISLYEY 314 (315)
Q Consensus 240 ~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~s~~~d~~i~i~~~ 314 (315)
.+|...|.+++|+|+++++++++.||.|++||+.+++....+..|...+++++|+|++.. +++++.|+.+.+|++
T Consensus 225 ~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (814)
T 3mkq_A 225 EGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300 (814)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEEC
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEc
Confidence 999999999999999999999999999999999999988888889999999999999874 355666777888875
No 55
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=8e-42 Score=287.55 Aligned_cols=305 Identities=19% Similarity=0.302 Sum_probs=224.3
Q ss_pred hhhhhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCC----cceeeccccccceEEEEeCC--CCCEEEEee
Q 021247 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDM----QLERTNTGHCLGVVSVAAHP--SGIIAASAS 79 (315)
Q Consensus 6 ~~~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~----~~~~~~~~h~~~v~~~~~~~--~g~~l~s~~ 79 (315)
++.++.+|.+.|++++|+|.++ +|++|+.||.|++|+..+. +....+.+|..+|.+++|+| ++.+|++++
T Consensus 3 ~~~~~~gH~~~v~~~~~~~~~~----~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~ 78 (351)
T 3f3f_A 3 MQPFDSGHDDLVHDVVYDFYGR----HVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASAS 78 (351)
T ss_dssp CCCEECCCSSCEEEEEECSSSS----EEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEE
T ss_pred ccccCcccccceeEEEEcCCCC----EEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEc
Confidence 3466789999999999999765 7999999999999998765 34556678999999999999 699999999
Q ss_pred CCCeEEEEECCCC---------ceeEEeeCCcccEEEEEECCC--CCeEEEEecCCCeEEEEecCCcceeeeecCCCCCC
Q 021247 80 LDSFVRVFDVDTN---------ASIATLEASPSEVWQMQFDPK--GTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEG 148 (315)
Q Consensus 80 ~d~~i~~w~~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 148 (315)
.|+.|++||+.++ +.+..+..|...|.+++|+|+ +.. +++++.|+.|++||+++.+.+..+.......
T Consensus 79 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 157 (351)
T 3f3f_A 79 YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLK-LACLGNDGILRLYDALEPSDLRSWTLTSEMK 157 (351)
T ss_dssp TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSE-EEEEETTCEEEEEECSSTTCTTCCEEEEEEE
T ss_pred CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcE-EEEecCCCcEEEecCCChHHhcccccccccc
Confidence 9999999999887 456778889999999999998 765 4678899999999998876554433211111
Q ss_pred CCCCccCCCCcceEEEEECCC---CCEEEEecCCCcEEEEEccccee--eeeecCCccceEEEEEcCCCC---cEEEEEe
Q 021247 149 LKPTDKSSSKKFVLSVAWSPD---GRRIACGSMDGTISVFDVTRAKF--LHHLEGHFMPVRSLVYSPVDP---RVLFSAS 220 (315)
Q Consensus 149 ~~~~~~~~~~~~i~~~~~~~~---~~~l~~~s~dg~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~---~~l~s~~ 220 (315)
........+...+.+++|+|+ +..|++++.++.+.+|+...++. ...+.+|...|.+++|+|.++ .+|++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~ 237 (351)
T 3f3f_A 158 VLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGC 237 (351)
T ss_dssp SCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEE
T ss_pred ccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEc
Confidence 111112245566899999997 89999999999998888876654 667788999999999999543 7999999
Q ss_pred CCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEE----EeCCCcEEEEecCccceehcccccccceEEEEEeeC
Q 021247 221 DDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITT----GSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPL 296 (315)
Q Consensus 221 ~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s----~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~ 296 (315)
.|+.|++||++.+........+.........++....+.. +.....+.+|+....+.+..+.+|...|++++|+|+
T Consensus 238 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~ 317 (351)
T 3f3f_A 238 KDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLT 317 (351)
T ss_dssp TTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSS
T ss_pred CCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCC
Confidence 9999999998765443333322222333333333333333 334555677777777788888899999999999999
Q ss_pred CCEEEEEeCCCcEEEeecC
Q 021247 297 GGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 297 ~~~l~s~~~d~~i~i~~~~ 315 (315)
+++|++++.||.|+||++.
T Consensus 318 ~~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 318 GTILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp SCCEEEEETTSCEEEEEEC
T ss_pred CCEEEEecCCCcEEEEecC
Confidence 9999999999999999974
No 56
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.1e-40 Score=292.51 Aligned_cols=293 Identities=23% Similarity=0.304 Sum_probs=242.8
Q ss_pred hhhccccce-EEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEE
Q 021247 9 VENAHEESV-WAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVF 87 (315)
Q Consensus 9 ~~~~h~~~v-~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w 87 (315)
.+.+|.+.| .++.+. + .+|++|+.||+|++||..+.+....+.+|..+|.+++++|++ ++++++.|++|++|
T Consensus 116 ~l~~h~~~v~~~~~~~--~----~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 116 TLRGHMTSVITCLQFE--D----NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVW 188 (464)
T ss_dssp EEECCSSSCEEEEEEE--T----TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEE
T ss_pred EEcCCCCCcEEEEEEC--C----CEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEE
Confidence 457898885 666663 2 379999999999999999999888999999999999999988 99999999999999
Q ss_pred ECCCCceeEEeeCCcccEEEEEECCC-CCeEEEEecCCCeEEEEecCCcceeeeecCCCC----------CCCCCCccCC
Q 021247 88 DVDTNASIATLEASPSEVWQMQFDPK-GTTLAVAGGGSASVKLWDTATWNLIATLSIPRP----------EGLKPTDKSS 156 (315)
Q Consensus 88 ~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~----------~~~~~~~~~~ 156 (315)
|+++++.+..+..|...|.+++|+|. +..++++++.|++|++||+++.+.......... ..........
T Consensus 189 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 189 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred ECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 99999999999999999999999853 234667889999999999987654322111100 0000011223
Q ss_pred CCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeE
Q 021247 157 SKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLV 236 (315)
Q Consensus 157 ~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~ 236 (315)
+...+.++ +++++++++++.|+.|++||+++++.+..+.+|...|.++.|+| ++.++++++.|+.|++||+++++.+
T Consensus 269 ~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 269 HMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDH-ERKRCISASMDTTIRIWDLENGELM 345 (464)
T ss_dssp CSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEE
T ss_pred ccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcEE
Confidence 44445554 67889999999999999999999999999999999999999998 6779999999999999999999999
Q ss_pred EEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeecC
Q 021247 237 TAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 237 ~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
..+.+|...|.++.++ +.+|++++.||.|++||++........ .|...+..++|+|++.+|++++ |+.|+|||+.
T Consensus 346 ~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~ 420 (464)
T 3v7d_B 346 YTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLR 420 (464)
T ss_dssp EEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE-ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETT
T ss_pred EEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee-cCCCCccEEEEEeCCCEEEEec-CCeEEEEECC
Confidence 9999999999999997 479999999999999999987655443 3566778899999999999988 8999999963
No 57
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.8e-41 Score=284.36 Aligned_cols=276 Identities=14% Similarity=0.126 Sum_probs=235.0
Q ss_pred hhhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCc---ceeeccccccceEEEEeCCCCC-EEEEeeCCCe
Q 021247 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQ---LERTNTGHCLGVVSVAAHPSGI-IAASASLDSF 83 (315)
Q Consensus 8 ~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~---~~~~~~~h~~~v~~~~~~~~g~-~l~s~~~d~~ 83 (315)
.+..+|.+.|++++|+|.+. +|++|+.|+.|++|+..+.+ ......+|...|.+++|+|++. ++++++.|+.
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~----~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 80 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKS----LLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGE 80 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGT----EEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSC
T ss_pred ecccCCCCcEEEEEEcCCCC----EEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCe
Confidence 34559999999999999765 79999999999999987665 2344558999999999999999 9999999999
Q ss_pred EEEEEC-CCCceeEEeeC--CcccEEEEEECCCCCeEEEEecCCCeEEEEecCC---------cceeeeecCCCCCCCCC
Q 021247 84 VRVFDV-DTNASIATLEA--SPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT---------WNLIATLSIPRPEGLKP 151 (315)
Q Consensus 84 i~~w~~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~---------~~~~~~~~~~~~~~~~~ 151 (315)
|++||+ .+++. ..+.. |...|.+++|+| ++. +++++.|+.|++||+++ .+.+..+
T Consensus 81 i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~-l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~---------- 147 (342)
T 1yfq_A 81 ILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDK-LIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT---------- 147 (342)
T ss_dssp EEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTE-EEEEETTSEEEEECHHHHTTBCEEEEESCSSSS----------
T ss_pred EEEEEeccCCce-EeccccCCCCceEEEEeCC-CCE-EEEEcCCCeEEEEcccccccccccccCCeeeEE----------
Confidence 999999 77654 66777 889999999999 664 56788999999999876 3332221
Q ss_pred CccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEccc-ce--eeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEE
Q 021247 152 TDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR-AK--FLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228 (315)
Q Consensus 152 ~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~-~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~w 228 (315)
.+...+.+++|+|++ +++++.|+.|++||+++ +. .......|...+.++.|+|.+++++++++.|+.|++|
T Consensus 148 ----~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~ 221 (342)
T 1yfq_A 148 ----KVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVE 221 (342)
T ss_dssp ----SSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEE
T ss_pred ----eeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEE
Confidence 244569999999887 99999999999999987 44 3334556788999999998335789999999999999
Q ss_pred eCCCC------eeEEEeecccc---------cEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehccccc-ccceEEEE
Q 021247 229 DAEGK------SLVTAMSGHAS---------WVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNH-TDQVWGVS 292 (315)
Q Consensus 229 d~~~~------~~~~~~~~~~~---------~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~~~v~~~~ 292 (315)
+.+.. +....+..|.. .|.+++|+|++++|++++.||.|++||+.+++.+..+..| ...|++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~ 301 (342)
T 1yfq_A 222 FFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA 301 (342)
T ss_dssp ECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE
T ss_pred EEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec
Confidence 98876 66777777755 9999999999999999999999999999999999889888 99999999
Q ss_pred EeeCCCEEEEEeCCCc
Q 021247 293 FRPLGGRVVSVSDDKS 308 (315)
Q Consensus 293 ~s~~~~~l~s~~~d~~ 308 (315)
|++.+|++++.||+
T Consensus 302 --~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 302 --CSDNILCLATSDDT 315 (342)
T ss_dssp --ECSSEEEEEEECTH
T ss_pred --CCCCeEEEEecCCc
Confidence 99999999999998
No 58
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7.4e-41 Score=291.35 Aligned_cols=274 Identities=26% Similarity=0.445 Sum_probs=240.7
Q ss_pred ccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCC
Q 021247 12 AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91 (315)
Q Consensus 12 ~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~ 91 (315)
.|...|++++|. + .++++|+.||.|++||..+.+....+.+|..+|.++++ ++.++++|+.||+|++||+.+
T Consensus 131 ~~~~~v~~~~~d--~----~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~ 202 (435)
T 1p22_A 131 ETSKGVYCLQYD--D----QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT 202 (435)
T ss_dssp SSCCCEEEEECC--S----SEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS
T ss_pred CCCCcEEEEEEC--C----CEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCC
Confidence 567789999882 2 37999999999999999999888889999999999998 788999999999999999999
Q ss_pred CceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCC
Q 021247 92 NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGR 171 (315)
Q Consensus 92 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 171 (315)
++.+..+..|...|.+++|+++ .+++++.|+.|++||+++.+...... ....|...|.+++| +++
T Consensus 203 ~~~~~~~~~h~~~v~~l~~~~~---~l~s~s~dg~i~vwd~~~~~~~~~~~----------~~~~~~~~v~~~~~--~~~ 267 (435)
T 1p22_A 203 GEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWDMASPTDITLRR----------VLVGHRAAVNVVDF--DDK 267 (435)
T ss_dssp CCEEEEECCCCSCEEEEECCTT---EEEEEETTSCEEEEECSSSSCCEEEE----------EECCCSSCEEEEEE--ETT
T ss_pred CcEEEEEcCCCCcEEEEEEcCC---EEEEeeCCCcEEEEeCCCCCCceeee----------EecCCCCcEEEEEe--CCC
Confidence 9999999999999999999753 56788999999999998765442111 11234556889998 788
Q ss_pred EEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEE
Q 021247 172 RIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDA 251 (315)
Q Consensus 172 ~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~ 251 (315)
+|++|+.||.|++||+++++.+..+.+|...+.++.|. +.++++|+.|+.|++||+++++.+..+.+|...|.++++
T Consensus 268 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 344 (435)
T 1p22_A 268 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 344 (435)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC
T ss_pred EEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe
Confidence 99999999999999999999999999999999999985 469999999999999999999999999999999999998
Q ss_pred cCCCCeEEEEeCCCcEEEEecCccc---------eehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeecC
Q 021247 252 SPDGAAITTGSSDRTVKLWDLNMRA---------AMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 252 ~~~~~~l~s~~~d~~i~iwd~~~~~---------~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
++.+|++|+.||.|++||+..+. .+..+.+|...|++++| ++.+|++++.||+|+|||+.
T Consensus 345 --~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~ 413 (435)
T 1p22_A 345 --DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFL 413 (435)
T ss_dssp --CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC--
T ss_pred --cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECC
Confidence 67899999999999999998766 67778899999999999 67899999999999999973
No 59
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.5e-41 Score=282.26 Aligned_cols=249 Identities=25% Similarity=0.434 Sum_probs=209.5
Q ss_pred cceeecccccc-ceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeE---EeeCCcccEEEEEECCCCCeEEEEecCCCe
Q 021247 51 QLERTNTGHCL-GVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIA---TLEASPSEVWQMQFDPKGTTLAVAGGGSAS 126 (315)
Q Consensus 51 ~~~~~~~~h~~-~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~ 126 (315)
++...+.+|.. .|.+++|+|+|.+|++++.|++|++||+.++.... ....|...|.+++|+|+++++ ++++.|++
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l-~s~s~D~~ 84 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYL-ASASFDAT 84 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEE-EEEETTSC
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEE-EEEECCCc
Confidence 34566778987 89999999999999999999999999998876432 235788999999999998855 67889999
Q ss_pred EEEEecCCcce--eeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccc---eeeeeecCCcc
Q 021247 127 VKLWDTATWNL--IATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRA---KFLHHLEGHFM 201 (315)
Q Consensus 127 i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~---~~~~~~~~~~~ 201 (315)
+++||....+. +..+ ..|...|.+++|+|++++|++|+.|+.|++||+.++ ..+..+.+|..
T Consensus 85 v~iw~~~~~~~~~~~~~-------------~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~ 151 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTL-------------EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQ 151 (345)
T ss_dssp EEEEEECCC-EEEEEEE-------------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCS
T ss_pred EEEEEccCCCeEEEEEc-------------cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCC
Confidence 99999876543 2222 235567999999999999999999999999999765 34566788999
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe--eEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCcc----
Q 021247 202 PVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKS--LVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMR---- 275 (315)
Q Consensus 202 ~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~---- 275 (315)
.|.+++|+| ++.+|++++.|+.|++||.+.+. ....+.+|...|.+++|+|++++|++|+.|++|++|+....
T Consensus 152 ~v~~~~~~p-~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~ 230 (345)
T 3fm0_A 152 DVKHVVWHP-SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQ 230 (345)
T ss_dssp CEEEEEECS-SSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTT
T ss_pred CeEEEEECC-CCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCc
Confidence 999999999 67799999999999999988764 34677899999999999999999999999999999996322
Q ss_pred -----------ceehcccc-cccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 276 -----------AAMQSMTN-HTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 276 -----------~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
+.+.++.+ |...|++++|+|++..|++++.|+.|++|+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~ 281 (345)
T 3fm0_A 231 GVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQE 281 (345)
T ss_dssp CCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEE
T ss_pred cceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEe
Confidence 12223333 7889999999999999999999999999985
No 60
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=286.41 Aligned_cols=290 Identities=20% Similarity=0.256 Sum_probs=236.1
Q ss_pred hhhhhccccceEEEEEee-cCCCCCcEEEEeeCCCcEEEEcCCCCcceeec-------------cccccceEEEEeCC-C
Q 021247 7 KSVENAHEESVWAVTWVP-ATETRPALLLTGSLDETVKLWRPDDMQLERTN-------------TGHCLGVVSVAAHP-S 71 (315)
Q Consensus 7 ~~~~~~h~~~v~~v~~~~-~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~-------------~~h~~~v~~~~~~~-~ 71 (315)
..+..+|.+.|++++|+| .++ +|++|+.||.|++|+..+.+..... .+|...|.+++|+| +
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~~~----~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 111 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVEGR----YMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHD 111 (408)
T ss_dssp EEECCCCSSCEEEEEECTTTCC----EEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTC
T ss_pred eeeeeccCCcEEEEEEecCCCC----EEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCC
Confidence 345678999999999999 654 7999999999999999876654433 35999999999999 7
Q ss_pred CCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCC--eEEEEecCCCeEEEEecCCcceeeeecCCCCCCC
Q 021247 72 GIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGT--TLAVAGGGSASVKLWDTATWNLIATLSIPRPEGL 149 (315)
Q Consensus 72 g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~ 149 (315)
+.++++++.|+.|++||+.+++....+. +...+..+.++|.+. .++++++.++.|++||+++++.+..+.
T Consensus 112 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~------- 183 (408)
T 4a11_B 112 TGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ------- 183 (408)
T ss_dssp TTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC-------
T ss_pred CcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec-------
Confidence 7899999999999999999998887776 567889999998643 256788899999999999877665553
Q ss_pred CCCccCCCCcceEEEEECCCCC-EEEEecCCCcEEEEEcccce-eeeee---------------cCCccceEEEEEcCCC
Q 021247 150 KPTDKSSSKKFVLSVAWSPDGR-RIACGSMDGTISVFDVTRAK-FLHHL---------------EGHFMPVRSLVYSPVD 212 (315)
Q Consensus 150 ~~~~~~~~~~~i~~~~~~~~~~-~l~~~s~dg~i~i~d~~~~~-~~~~~---------------~~~~~~v~~~~~~~~~ 212 (315)
.+...|.+++|+|+++ .|++++.||.|++||++++. ....+ ..|...|.+++|+| +
T Consensus 184 ------~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~ 256 (408)
T 4a11_B 184 ------GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS-D 256 (408)
T ss_dssp ------CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT-T
T ss_pred ------CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC-C
Confidence 2445699999999998 48899999999999997664 23332 56888999999999 6
Q ss_pred CcEEEEEeCCCeEEEEeCCCCeeEEEeecc-----cccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccc
Q 021247 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGH-----ASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQ 287 (315)
Q Consensus 213 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 287 (315)
++++++++.|+.|++||++.++.......+ ...+........+..+++++.|+.|++||+.+++.+..+.+|...
T Consensus 257 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~ 336 (408)
T 4a11_B 257 GLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKT 336 (408)
T ss_dssp SSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSC
T ss_pred CCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCe
Confidence 789999999999999999877654333221 111111222233456777788999999999999999999999999
Q ss_pred eEEEEEeeCCCEEEEEeCCCcEEEeecC
Q 021247 288 VWGVSFRPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 288 v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
|++++|+|++++|++++.||.|++|++.
T Consensus 337 v~~~~~s~~~~~l~s~~~dg~i~iw~~~ 364 (408)
T 4a11_B 337 VDCCVFQSNFQELYSGSRDCNILAWVPS 364 (408)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEEEC
T ss_pred EEEEEEcCCCCEEEEECCCCeEEEEeCC
Confidence 9999999999999999999999999974
No 61
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.3e-40 Score=279.43 Aligned_cols=284 Identities=17% Similarity=0.251 Sum_probs=238.7
Q ss_pred ccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCC
Q 021247 12 AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91 (315)
Q Consensus 12 ~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~ 91 (315)
.|.++|.+++|+|++. +++++..++.+..|............+|..+|.+++|+|++.++++++ |+.|++||+.+
T Consensus 7 ~~~~~v~~~~~s~dg~----~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~ 81 (337)
T 1gxr_A 7 MGSKPAYSFHVTADGQ----MQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISH 81 (337)
T ss_dssp EEEEECCEEEECSSSC----EEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTS
T ss_pred ccCCceeEEEECCCCC----EEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCC
Confidence 4678999999999886 577777777777776544433334457999999999999999999998 99999999987
Q ss_pred Cce---eEEee--CCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEE
Q 021247 92 NAS---IATLE--ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW 166 (315)
Q Consensus 92 ~~~---~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 166 (315)
+.. +..+. .+...+.+++|+|+++.+ ++++.|+.|++||+++.+....... ..+...+.+++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~-----------~~~~~~i~~~~~ 149 (337)
T 1gxr_A 82 PGNKSPVSQLDCLNRDNYIRSCKLLPDGCTL-IVGGEASTLSIWDLAAPTPRIKAEL-----------TSSAPACYALAI 149 (337)
T ss_dssp TTCCSCSEEEECSCTTSBEEEEEECTTSSEE-EEEESSSEEEEEECCCC--EEEEEE-----------ECSSSCEEEEEE
T ss_pred CCceeeeecccccCCCCcEEEEEEcCCCCEE-EEEcCCCcEEEEECCCCCcceeeec-----------ccCCCceEEEEE
Confidence 653 33333 678899999999998865 5678899999999987663222211 123445899999
Q ss_pred CCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccE
Q 021247 167 SPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWV 246 (315)
Q Consensus 167 ~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i 246 (315)
+|++++|++++.|+.|++||+++++....+..|...+.++.|+| +++++++++.|+.|++||++.++.+..+. +...+
T Consensus 150 ~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v 227 (337)
T 1gxr_A 150 SPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISN-DGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQI 227 (337)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCE
T ss_pred CCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECC-CCCEEEEEecCCcEEEEECCCCceEeeec-CCCce
Confidence 99999999999999999999999999999999999999999999 67899999999999999999888776654 67889
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeecC
Q 021247 247 LSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 247 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
.+++|+|+++++++++.|+.|++||++..+.. .+..|...+.+++|+|++++|++++.||.|++|++.
T Consensus 228 ~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~ 295 (337)
T 1gxr_A 228 FSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP 295 (337)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECC
Confidence 99999999999999999999999999987654 466888999999999999999999999999999963
No 62
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.7e-40 Score=276.19 Aligned_cols=247 Identities=24% Similarity=0.363 Sum_probs=216.0
Q ss_pred ceeeccccccceEEEEeCCCC-CEEEEeeCCCeEEEEECCCC-----ceeEEeeCCcccEEEEEECCCCCeEEEEecCCC
Q 021247 52 LERTNTGHCLGVVSVAAHPSG-IIAASASLDSFVRVFDVDTN-----ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA 125 (315)
Q Consensus 52 ~~~~~~~h~~~v~~~~~~~~g-~~l~s~~~d~~i~~w~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~ 125 (315)
+...+.+|..+|.+++++|++ .+|++++.|++|++|++... ..+..+..|...|.+++|+|+++++ ++++.|+
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l-~s~s~D~ 87 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYA-LSASWDK 87 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEE-EEEETTS
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEE-EEEeCCC
Confidence 445678999999999999965 89999999999999998642 3456788999999999999998855 6888999
Q ss_pred eEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEE
Q 021247 126 SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRS 205 (315)
Q Consensus 126 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~ 205 (315)
+|++||+++++.+..+. .|...|.+++|+|++.+|++|+.|+.|++||++ ++.+..+.+|...|.+
T Consensus 88 ~v~~wd~~~~~~~~~~~-------------~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~ 153 (319)
T 3frx_A 88 TLRLWDVATGETYQRFV-------------GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQ 153 (319)
T ss_dssp EEEEEETTTTEEEEEEE-------------CCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEE
T ss_pred EEEEEECCCCCeeEEEc-------------cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEE
Confidence 99999999988776653 345569999999999999999999999999996 4567788899999999
Q ss_pred EEEcCC-----CCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehc
Q 021247 206 LVYSPV-----DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS 280 (315)
Q Consensus 206 ~~~~~~-----~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 280 (315)
+.|.|. ++..+++++.|+.|++||++..+....+.+|...|.+++|+|++++|++|+.|++|++||+..++.+.+
T Consensus 154 ~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~ 233 (319)
T 3frx_A 154 VRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYT 233 (319)
T ss_dssp EEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE
T ss_pred EEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 999984 344899999999999999999988888999999999999999999999999999999999999888887
Q ss_pred ccccccceEEEEEeeCCCEEEEEeCCCcEEEeecC
Q 021247 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 281 ~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
+..+ ..|.+++|+|++.+|++++.+ .+++|++.
T Consensus 234 ~~~~-~~v~~~~~sp~~~~la~~~~~-~i~v~~~~ 266 (319)
T 3frx_A 234 LSAQ-DEVFSLAFSPNRYWLAAATAT-GIKVFSLD 266 (319)
T ss_dssp EECC-SCEEEEEECSSSSEEEEEETT-EEEEEEET
T ss_pred ecCC-CcEEEEEEcCCCCEEEEEcCC-CcEEEEeC
Confidence 7654 689999999999988887755 59999863
No 63
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=6.7e-42 Score=285.57 Aligned_cols=248 Identities=23% Similarity=0.373 Sum_probs=202.6
Q ss_pred eccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCc--eeEEeeCCcccEEEEEECCC--CCeEEEEecCCCeEEEE
Q 021247 55 TNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA--SIATLEASPSEVWQMQFDPK--GTTLAVAGGGSASVKLW 130 (315)
Q Consensus 55 ~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~ 130 (315)
.+.+|..+|.+++|+|+|++|++++.|++|++||+.++. .+..+..|..+|++++|+|. ++ ++++++.|++|++|
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~-~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGN-ILASCSYDRKVIIW 86 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSS-CEEEEETTSCEEEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCC-EEEEEECCCEEEEE
Confidence 356899999999999999999999999999999998775 45678899999999999753 45 56788999999999
Q ss_pred ecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCC--CCEEEEecCCCcEEEEEcccce---eeeeecCCccceEE
Q 021247 131 DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD--GRRIACGSMDGTISVFDVTRAK---FLHHLEGHFMPVRS 205 (315)
Q Consensus 131 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~s~dg~i~i~d~~~~~---~~~~~~~~~~~v~~ 205 (315)
|+++++...... ...|...|.+++|+|+ +.+|++|+.|+.|++||++.+. ....+.+|...+.+
T Consensus 87 d~~~~~~~~~~~-----------~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~ 155 (316)
T 3bg1_A 87 REENGTWEKSHE-----------HAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNA 155 (316)
T ss_dssp CCSSSCCCEEEE-----------ECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCC
T ss_pred ECCCCcceEEEE-----------ccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcce
Confidence 998754221111 1234556999999997 7899999999999999998653 23456788899999
Q ss_pred EEEcCCC----------------CcEEEEEeCCCeEEEEeCCCC---eeEEEeecccccEEEEEEcCCC----CeEEEEe
Q 021247 206 LVYSPVD----------------PRVLFSASDDTHVHMYDAEGK---SLVTAMSGHASWVLSVDASPDG----AAITTGS 262 (315)
Q Consensus 206 ~~~~~~~----------------~~~l~s~~~d~~i~~wd~~~~---~~~~~~~~~~~~i~~~~~~~~~----~~l~s~~ 262 (315)
+.|+|.. +++|++++.|+.|++||.+.. ..+..+.+|..+|.+++|+|++ ++|++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s 235 (316)
T 3bg1_A 156 VSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCS 235 (316)
T ss_dssp CEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEE
T ss_pred EEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEc
Confidence 9999852 368999999999999998754 4566788999999999999986 7899999
Q ss_pred CCCcEEEEecCccc----eehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 263 SDRTVKLWDLNMRA----AMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 263 ~d~~i~iwd~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
.|++|++|++.... ....+..|.+.|++++|+|++++|++++.|++|+||+.
T Consensus 236 ~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 236 QDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp TTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred CCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence 99999999987621 22345678899999999999999999999999999985
No 64
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2e-41 Score=282.72 Aligned_cols=254 Identities=21% Similarity=0.233 Sum_probs=202.2
Q ss_pred hhhhhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCc--ceeeccccccceEEEEeCC--CCCEEEEeeCC
Q 021247 6 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQ--LERTNTGHCLGVVSVAAHP--SGIIAASASLD 81 (315)
Q Consensus 6 ~~~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~--~~~~~~~h~~~v~~~~~~~--~g~~l~s~~~d 81 (315)
+..++.+|++.|++++|+|.++ +|++|+.|++|++||..+.+ ....+.+|..+|.+++|++ ++.+|++++.|
T Consensus 5 ~~~~~~~H~~~V~~v~~s~~g~----~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D 80 (316)
T 3bg1_A 5 INTVDTSHEDMIHDAQMDYYGT----RLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD 80 (316)
T ss_dssp ---------CCEEEEEECGGGC----EEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT
T ss_pred eeeecccccCeEEEeeEcCCCC----EEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC
Confidence 5667789999999999999875 79999999999999987653 3556789999999999986 48999999999
Q ss_pred CeEEEEECCCCc--eeEEeeCCcccEEEEEECCCC-CeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCC
Q 021247 82 SFVRVFDVDTNA--SIATLEASPSEVWQMQFDPKG-TTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSK 158 (315)
Q Consensus 82 ~~i~~w~~~~~~--~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (315)
++|++||++++. ....+..|...|.+++|+|++ ..++++++.|++|++||++......... ....|.
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~----------~~~~h~ 150 (316)
T 3bg1_A 81 RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKK----------INNAHT 150 (316)
T ss_dssp SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECC----------BTTSSS
T ss_pred CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceee----------eecccc
Confidence 999999998864 556677889999999999983 3356789999999999997643211110 112345
Q ss_pred cceEEEEECCC-----------------CCEEEEecCCCcEEEEEcccc---eeeeeecCCccceEEEEEcCCC---CcE
Q 021247 159 KFVLSVAWSPD-----------------GRRIACGSMDGTISVFDVTRA---KFLHHLEGHFMPVRSLVYSPVD---PRV 215 (315)
Q Consensus 159 ~~i~~~~~~~~-----------------~~~l~~~s~dg~i~i~d~~~~---~~~~~~~~~~~~v~~~~~~~~~---~~~ 215 (315)
..+.+++|+|+ +++|++|+.|+.|++||++.. +....+.+|...|++++|+|.+ ..+
T Consensus 151 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~ 230 (316)
T 3bg1_A 151 IGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230 (316)
T ss_dssp SCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCE
T ss_pred CCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCce
Confidence 56888999987 478999999999999999754 4567788999999999999964 378
Q ss_pred EEEEeCCCeEEEEeCCCC----eeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecC
Q 021247 216 LFSASDDTHVHMYDAEGK----SLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLN 273 (315)
Q Consensus 216 l~s~~~d~~i~~wd~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~ 273 (315)
|++++.|++|++||.+.. .....+..|...|.+++|+|++++|++++.|++|++|+..
T Consensus 231 las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 231 IASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 999999999999998752 1223456788999999999999999999999999999976
No 65
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-40 Score=277.63 Aligned_cols=247 Identities=23% Similarity=0.355 Sum_probs=202.9
Q ss_pred CcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCC--ceeEEe-eC-CcccEEEEEECCCCCeEEEEecCCC
Q 021247 50 MQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN--ASIATL-EA-SPSEVWQMQFDPKGTTLAVAGGGSA 125 (315)
Q Consensus 50 ~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~~~~~~~~d~ 125 (315)
.++.+.+.+|..+|.+++++|+ +|++++.|++|++||+..+ .....+ .. |...|.+++|+|+++. +++++.|+
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~-las~s~D~ 80 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSL-LAAGSFDS 80 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSE-EEEEETTS
T ss_pred cccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCE-EEEEeCCC
Confidence 3456677899999999999987 9999999999999999875 344445 34 8889999999999875 56888999
Q ss_pred eEEEEecCCcc-------eeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEccc----ceeee
Q 021247 126 SVKLWDTATWN-------LIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR----AKFLH 194 (315)
Q Consensus 126 ~i~~~d~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~----~~~~~ 194 (315)
+|++||..... .+.. ...|...|.+++|+|++++|++|+.|+.|++||++. .+.+.
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~-------------~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~ 147 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAI-------------IEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECIS 147 (330)
T ss_dssp CEEEEEC-------CCCEEEEE-------------EC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEE
T ss_pred cEEEEEcccCcCccccceeEEE-------------EcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEE
Confidence 99999985321 1111 134566799999999999999999999999999943 24567
Q ss_pred eecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCC--eeEEEeecccccEEEEEEcCC--CCeEEEEeCCCcEEEE
Q 021247 195 HLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGK--SLVTAMSGHASWVLSVDASPD--GAAITTGSSDRTVKLW 270 (315)
Q Consensus 195 ~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~--~~~~~~~~~~~~i~~~~~~~~--~~~l~s~~~d~~i~iw 270 (315)
.+.+|...|.++.|+| ++.+|++++.|++|++||...+ +.+..+.+|...|.+++|+|+ +..|++|+.|++|++|
T Consensus 148 ~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw 226 (330)
T 2hes_X 148 VLQEHSQDVKHVIWHP-SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVW 226 (330)
T ss_dssp EECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEE
T ss_pred EeccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEE
Confidence 7889999999999999 6789999999999999998765 567788899999999999998 6789999999999999
Q ss_pred ecCcc--------ceehcccc-cccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 271 DLNMR--------AAMQSMTN-HTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 271 d~~~~--------~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
|++.+ .....+.. |...|++++|++++ +|++++.||+|+||+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~ 278 (330)
T 2hes_X 227 KYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEE 278 (330)
T ss_dssp EEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEE
T ss_pred EecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEc
Confidence 99764 23344444 88999999999765 8999999999999985
No 66
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=6.3e-41 Score=292.37 Aligned_cols=286 Identities=13% Similarity=0.237 Sum_probs=229.1
Q ss_pred ccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCc-----------ceeeccccc------------cceEEEEe
Q 021247 12 AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQ-----------LERTNTGHC------------LGVVSVAA 68 (315)
Q Consensus 12 ~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~-----------~~~~~~~h~------------~~v~~~~~ 68 (315)
.|.+.|++++|+|.+. +|++|+.||.|++|+..+.+ +...+.+|. .+|.+++|
T Consensus 26 ~~~~~V~~v~~s~~g~----~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~ 101 (447)
T 3dw8_B 26 AEADIISTVEFNHSGE----LLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW 101 (447)
T ss_dssp CGGGSEEEEEECSSSS----EEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE
T ss_pred cccCcEEEEEECCCCC----EEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEE
Confidence 5789999999999765 79999999999999987655 356677898 88999999
Q ss_pred CCCC--CEEEEeeCCCeEEEEECCCCcee---------------------------------------EE-eeCCcccEE
Q 021247 69 HPSG--IIAASASLDSFVRVFDVDTNASI---------------------------------------AT-LEASPSEVW 106 (315)
Q Consensus 69 ~~~g--~~l~s~~~d~~i~~w~~~~~~~~---------------------------------------~~-~~~~~~~v~ 106 (315)
+|++ .++++++.|++|++||+.++... .. ...|...|.
T Consensus 102 ~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 181 (447)
T 3dw8_B 102 LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHIN 181 (447)
T ss_dssp CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCC
T ss_pred cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceE
Confidence 9998 79999999999999998764331 12 356888999
Q ss_pred EEEECCCCCeEEEEecCCCeEEEEecCC-cceeeeecCCCCCCCCCCccCCCCcceEEEEECCCC-CEEEEecCCCcEEE
Q 021247 107 QMQFDPKGTTLAVAGGGSASVKLWDTAT-WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDG-RRIACGSMDGTISV 184 (315)
Q Consensus 107 ~~~~~~~~~~~~~~~~~d~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~s~dg~i~i 184 (315)
+++|+|+++.+ ++| .|+.|++||+++ .+.+..+... +.....|...|.+++|+|++ ++|++|+.||.|++
T Consensus 182 ~~~~~~~~~~l-~s~-~d~~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~i 253 (447)
T 3dw8_B 182 SISINSDYETY-LSA-DDLRINLWHLEITDRSFNIVDIK------PANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRL 253 (447)
T ss_dssp EEEECTTSSEE-EEE-CSSEEEEEETTEEEEEEEEEECC------CSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred EEEEcCCCCEE-EEe-CCCeEEEEECCCCCceeeeeecc------cccccccCcceEEEEECCCCCcEEEEEeCCCeEEE
Confidence 99999998865 456 799999999984 3344333221 11233466779999999998 89999999999999
Q ss_pred EEccccee----eeeecCCcc------------ceEEEEEcCCCCcEEEEEeCCCeEEEEeCCC-CeeEEEeeccccc--
Q 021247 185 FDVTRAKF----LHHLEGHFM------------PVRSLVYSPVDPRVLFSASDDTHVHMYDAEG-KSLVTAMSGHASW-- 245 (315)
Q Consensus 185 ~d~~~~~~----~~~~~~~~~------------~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~-- 245 (315)
||+++++. ...+..|.. .|.+++|+| ++++|++++. +.|++||++. ++.+..+.+|...
T Consensus 254 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~ 331 (447)
T 3dw8_B 254 CDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRS 331 (447)
T ss_dssp EETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTT
T ss_pred EECcCCccccceeeEeccCCCccccccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCCCCccccceeeccccccc
Confidence 99998876 677777775 899999999 6788999998 9999999986 7777777777532
Q ss_pred -------------EEEEEEcCCCCeEEEEeCCCcEEEEecCccceehccc------------------------------
Q 021247 246 -------------VLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMT------------------------------ 282 (315)
Q Consensus 246 -------------i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~------------------------------ 282 (315)
+..++|+|++++|++|+.||.|++||+.+++.+. +.
T Consensus 332 ~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (447)
T 3dw8_B 332 KLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKRKKDEISV 410 (447)
T ss_dssp THHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCCCTTCEEG
T ss_pred cccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCcccccccc
Confidence 3348999999999999999999999998776532 11
Q ss_pred ---ccccceEEEEEeeCCCEEEEEeCCCcEEEee
Q 021247 283 ---NHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313 (315)
Q Consensus 283 ---~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 313 (315)
.+...|..++|+|++++||+++.++ +.+|.
T Consensus 411 ~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~ 443 (447)
T 3dw8_B 411 DSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQ 443 (447)
T ss_dssp GGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEE
T ss_pred cccccCCceeEEEECCCCCEEEEEecce-eeeec
Confidence 2345788999999999999888876 77775
No 67
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.6e-39 Score=270.65 Aligned_cols=251 Identities=24% Similarity=0.404 Sum_probs=220.3
Q ss_pred CcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEE
Q 021247 50 MQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129 (315)
Q Consensus 50 ~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~ 129 (315)
..+...+.+|..+|.+++|+|+|.++++++.|+.|++|++.+++....+..|...|.+++|+|+++.+ ++++.|+.|++
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~d~~i~v 91 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL-VSASDDKTLKI 91 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE-EEEETTSEEEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEE-EEECCCCEEEE
Confidence 34455678999999999999999999999999999999999999988999999999999999998854 67889999999
Q ss_pred EecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEc
Q 021247 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS 209 (315)
Q Consensus 130 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 209 (315)
||+++++.+..+.. |...|.+++|+|++++|++|+.|+.|++||+++++.+..+..|..+|.++.|+
T Consensus 92 wd~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 158 (312)
T 4ery_A 92 WDVSSGKCLKTLKG-------------HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 158 (312)
T ss_dssp EETTTCCEEEEEEC-------------CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred EECCCCcEEEEEcC-------------CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEc
Confidence 99998877766532 34569999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCCCeeEEEe-ecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccce
Q 021247 210 PVDPRVLFSASDDTHVHMYDAEGKSLVTAM-SGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQV 288 (315)
Q Consensus 210 ~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v 288 (315)
| ++.++++++.|+.|++||++.++.+..+ ..+...+..++|+|++++|++++.|+.|++||++.++.+..+.+|....
T Consensus 159 ~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 237 (312)
T 4ery_A 159 R-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEK 237 (312)
T ss_dssp T-TSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSS
T ss_pred C-CCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCce
Confidence 8 6779999999999999999988776665 4566789999999999999999999999999999998888887776543
Q ss_pred E--EEEE-eeCCCEEEEEeCCCcEEEeecC
Q 021247 289 W--GVSF-RPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 289 ~--~~~~-s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
. ...+ .+++.+|++++.||.|++||+.
T Consensus 238 ~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 238 YCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp SCCCEEEECSSSCEEEECCTTSCEEEEETT
T ss_pred EEEEEEEEeCCCcEEEEECCCCEEEEEECC
Confidence 2 2234 4678899999999999999963
No 68
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.9e-39 Score=283.20 Aligned_cols=276 Identities=26% Similarity=0.411 Sum_probs=244.0
Q ss_pred hhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEE
Q 021247 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFD 88 (315)
Q Consensus 9 ~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~ 88 (315)
...+|...|++++|.+ .++++|+.||+|++|+..+.+....+.+|...|.++.++ +..+++++.|++|++||
T Consensus 154 ~~~~h~~~v~~~~~~~------~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd 225 (445)
T 2ovr_B 154 TLVGHTGGVWSSQMRD------NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWD 225 (445)
T ss_dssp ECCCCSSCEEEEEEET------TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEE
T ss_pred EEcCCCCCEEEEEecC------CEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEE
Confidence 4568999999999973 379999999999999999988888889999999999995 56899999999999999
Q ss_pred CCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECC
Q 021247 89 VDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP 168 (315)
Q Consensus 89 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 168 (315)
+.+++.+..+..|...+.++++ +++ .+++++.|+.|++||+++++.+..+.. +...|.+++|
T Consensus 226 ~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~-------------~~~~v~~~~~-- 287 (445)
T 2ovr_B 226 IETGQCLHVLMGHVAAVRCVQY--DGR-RVVSGAYDFMVKVWDPETETCLHTLQG-------------HTNRVYSLQF-- 287 (445)
T ss_dssp SSSCCEEEEEECCSSCEEEEEE--CSS-CEEEEETTSCEEEEEGGGTEEEEEECC-------------CSSCEEEEEE--
T ss_pred CCCCcEEEEEcCCcccEEEEEE--CCC-EEEEEcCCCEEEEEECCCCcEeEEecC-------------CCCceEEEEE--
Confidence 9999999999999999999999 344 456788999999999998877766632 3345889998
Q ss_pred CCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeec---cccc
Q 021247 169 DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSG---HASW 245 (315)
Q Consensus 169 ~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~---~~~~ 245 (315)
+++++++++.|+.|++||+++++.+..+.+|...+.++.+. +.++++++.|+.|++||+++++.+..+.. |...
T Consensus 288 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 364 (445)
T 2ovr_B 288 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 364 (445)
T ss_dssp CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSC
T ss_pred CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe---CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCC
Confidence 78899999999999999999999999999999999998875 45899999999999999999888888876 8889
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcc-----cccccceEEEEEeeCCCEEEEEeCCCc----EEEeecC
Q 021247 246 VLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSM-----TNHTDQVWGVSFRPLGGRVVSVSDDKS----ISLYEYS 315 (315)
Q Consensus 246 i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~l~s~~~d~~----i~i~~~~ 315 (315)
|.+++++ +++|++|+.||.|++||+.+++.+..+ ..|.+.|++++|+|++..+++++.||+ |.|||++
T Consensus 365 v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 365 VTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp EEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred EEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECC
Confidence 9999996 579999999999999999998887766 467889999999999999999999998 9999985
No 69
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.6e-39 Score=281.46 Aligned_cols=276 Identities=29% Similarity=0.453 Sum_probs=242.5
Q ss_pred hhhhhccccce-EEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEE
Q 021247 7 KSVENAHEESV-WAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVR 85 (315)
Q Consensus 7 ~~~~~~h~~~v-~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~ 85 (315)
..++.+|.+.| .++.+ .++ +|++|+.||+|++|+..+.+....+.+|..+|.++.++ +.++++++.|++|+
T Consensus 111 ~~~l~~h~~~v~~~~~~--~g~----~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~ 182 (445)
T 2ovr_B 111 PKVLKGHDDHVITCLQF--CGN----RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLK 182 (445)
T ss_dssp CEEEECSTTSCEEEEEE--ETT----EEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEE
T ss_pred eEEecccCCCcEEEEEE--cCC----EEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEE
Confidence 34567899875 55554 333 79999999999999999999989999999999999997 66999999999999
Q ss_pred EEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEE
Q 021247 86 VFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVA 165 (315)
Q Consensus 86 ~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 165 (315)
+||+.+++.+..+..|...|.++.+++ + .+++++.|++|++||+++++.+..+.. +...+.+++
T Consensus 183 vwd~~~~~~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg~i~~wd~~~~~~~~~~~~-------------~~~~v~~~~ 246 (445)
T 2ovr_B 183 VWNAETGECIHTLYGHTSTVRCMHLHE--K-RVVSGSRDATLRVWDIETGQCLHVLMG-------------HVAAVRCVQ 246 (445)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEET--T-EEEEEETTSEEEEEESSSCCEEEEEEC-------------CSSCEEEEE
T ss_pred EEECCcCcEEEEECCCCCcEEEEEecC--C-EEEEEeCCCEEEEEECCCCcEEEEEcC-------------CcccEEEEE
Confidence 999999999999999999999999964 3 467889999999999998887766542 344588898
Q ss_pred ECCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeeccccc
Q 021247 166 WSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASW 245 (315)
Q Consensus 166 ~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~ 245 (315)
+ +++++++|+.||.|++||+++++.+..+.+|...|.++.| ++.++++++.|+.|++||+++++.+..+.+|...
T Consensus 247 ~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 321 (445)
T 2ovr_B 247 Y--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL 321 (445)
T ss_dssp E--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSC
T ss_pred E--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE---CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCccc
Confidence 8 6889999999999999999999999999999999999998 4678999999999999999999999999999999
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccc---cccceEEEEEeeCCCEEEEEeCCCcEEEeecC
Q 021247 246 VLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN---HTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 246 i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
+.++.++ +.++++|+.||.|++||+++++.+..+.. |...|++++|+ +++|++++.||+|+|||+.
T Consensus 322 v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~ 390 (445)
T 2ovr_B 322 TSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLK 390 (445)
T ss_dssp EEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETT
T ss_pred EEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECC
Confidence 9888775 56999999999999999999888877765 78899999996 5799999999999999963
No 70
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-39 Score=280.26 Aligned_cols=251 Identities=24% Similarity=0.381 Sum_probs=213.8
Q ss_pred cccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCC
Q 021247 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92 (315)
Q Consensus 13 h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~ 92 (315)
+...|.+++|+|+++ +|++|+.|+.|++||..+.+....+.+|...|.+++|+|++.+|++++.|++|++||+.++
T Consensus 122 ~~~~v~~v~~s~dg~----~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~ 197 (393)
T 1erj_A 122 SDLYIRSVCFSPDGK----FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG 197 (393)
T ss_dssp CCCBEEEEEECTTSS----EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred CceeEEEEEECCCCC----EEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC
Confidence 344699999999775 7999999999999999998888889999999999999999999999999999999999999
Q ss_pred ceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCE
Q 021247 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRR 172 (315)
Q Consensus 93 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 172 (315)
++...+. +...+..++++|....++++++.|++|++||+++++.+..+..... ....|...|.+++|+|++++
T Consensus 198 ~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~------~~~~h~~~v~~v~~~~~g~~ 270 (393)
T 1erj_A 198 QCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENE------SGTGHKDSVYSVVFTRDGQS 270 (393)
T ss_dssp EEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------------CCCSSCEEEEEECTTSSE
T ss_pred eeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeeccccc------CCCCCCCCEEEEEECCCCCE
Confidence 8877766 4567899999994444567889999999999998877766532211 11346677999999999999
Q ss_pred EEEecCCCcEEEEEcccc------------eeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEee
Q 021247 173 IACGSMDGTISVFDVTRA------------KFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS 240 (315)
Q Consensus 173 l~~~s~dg~i~i~d~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 240 (315)
|++|+.|+.|++||+++. .....+.+|...|.+++|+| ++.+|++++.|+.|++||.++++.+..+.
T Consensus 271 l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~l~ 349 (393)
T 1erj_A 271 VVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLLMLQ 349 (393)
T ss_dssp EEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECG-GGCEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECC-CCCEEEEEeCCCeEEEEECCCCeEEEEEC
Confidence 999999999999999753 23456678999999999998 66799999999999999999999999999
Q ss_pred cccccEEEEEEcC------CCCeEEEEeCCCcEEEEecCcc
Q 021247 241 GHASWVLSVDASP------DGAAITTGSSDRTVKLWDLNMR 275 (315)
Q Consensus 241 ~~~~~i~~~~~~~------~~~~l~s~~~d~~i~iwd~~~~ 275 (315)
+|...|.++++++ ++.+|++|+.|++|++|++...
T Consensus 350 ~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 350 GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp CCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 9999999999886 6789999999999999998643
No 71
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=9.9e-40 Score=277.16 Aligned_cols=287 Identities=17% Similarity=0.215 Sum_probs=231.3
Q ss_pred hhhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCC-Ccce-eeccccccceEEEEeCCCCCEEEEeeCCCeEE
Q 021247 8 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD-MQLE-RTNTGHCLGVVSVAAHPSGIIAASASLDSFVR 85 (315)
Q Consensus 8 ~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~-~~~~-~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~ 85 (315)
.+..+|.+.|++++|+|... ...+|++|+.||.|++|+..+ .... ..+.+|..+|.+++|+|++.+|++++.|+.|+
T Consensus 33 ~~~~~h~~~v~~~~~~~~~~-~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~ 111 (368)
T 3mmy_A 33 EVTSSPDDSIGCLSFSPPTL-PGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAK 111 (368)
T ss_dssp ECSSCCSSCEEEEEECCTTS-SSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EeccCCCCceEEEEEcCCCC-CceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEE
Confidence 34679999999999999741 013799999999999999886 4333 66788999999999999999999999999999
Q ss_pred EEECCCCceeEEeeCCcccEEEEEE--CCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEE
Q 021247 86 VFDVDTNASIATLEASPSEVWQMQF--DPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLS 163 (315)
Q Consensus 86 ~w~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 163 (315)
+||+.+++.+. ...|...|.+++| +|++.. +++++.|+.|++||+++++.+..+..+. .+.+
T Consensus 112 iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~~~--------------~~~~ 175 (368)
T 3mmy_A 112 MWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSC-VMTGSWDKTLKFWDTRSSNPMMVLQLPE--------------RCYC 175 (368)
T ss_dssp EEETTTTEEEE-EEECSSCEEEEEEEECSSCEE-EEEEETTSEEEEECSSCSSCSEEEECSS--------------CEEE
T ss_pred EEEcCCCCcee-eccccCceEEEEEEeCCCCCE-EEEccCCCcEEEEECCCCcEEEEEecCC--------------CceE
Confidence 99999988766 4558889999999 787764 5678899999999999887776664322 2555
Q ss_pred EEECCCCCEEEEecCCCcEEEEEcccceeeeee--cCCccceEEEEEcCC---CCcEEEEEeCCCeEEEEeCCCC---ee
Q 021247 164 VAWSPDGRRIACGSMDGTISVFDVTRAKFLHHL--EGHFMPVRSLVYSPV---DPRVLFSASDDTHVHMYDAEGK---SL 235 (315)
Q Consensus 164 ~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~~~---~~~~l~s~~~d~~i~~wd~~~~---~~ 235 (315)
+.+. ...+++++.++.+++||++........ ..+...+..+.+.+. .+..+++++.|+.|++||.+.. ..
T Consensus 176 ~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~ 253 (368)
T 3mmy_A 176 ADVI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKD 253 (368)
T ss_dssp EEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHH
T ss_pred EEec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccc
Confidence 5555 457888889999999999765433222 123334455555432 2234999999999999999876 45
Q ss_pred EEEeecccc------------cEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEE
Q 021247 236 VTAMSGHAS------------WVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSV 303 (315)
Q Consensus 236 ~~~~~~~~~------------~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 303 (315)
+..+.+|.. .|.+++|+|++++|++++.||.|++||+++++.+..+..|...|++++|+|+|.+|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 333 (368)
T 3mmy_A 254 NFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYA 333 (368)
T ss_dssp SEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEE
T ss_pred ceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEE
Confidence 566677765 79999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCcEEEee
Q 021247 304 SDDKSISLYE 313 (315)
Q Consensus 304 ~~d~~i~i~~ 313 (315)
+.|+..+.|+
T Consensus 334 s~d~~~~~~~ 343 (368)
T 3mmy_A 334 SSYDWSKGHE 343 (368)
T ss_dssp ECCCSTTCGG
T ss_pred eccccccccc
Confidence 9998655554
No 72
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-40 Score=308.78 Aligned_cols=296 Identities=13% Similarity=0.125 Sum_probs=221.4
Q ss_pred ccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCC
Q 021247 12 AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91 (315)
Q Consensus 12 ~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~ 91 (315)
.|...|++++|+| +. +|++++.|++|++||..+.+....+. |...|.+++|+|++.++++|+.||+|++||+.+
T Consensus 56 ~~~~~V~~l~fsp-g~----~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~ 129 (902)
T 2oaj_A 56 EDRSAIKEMRFVK-GI----YLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDR 129 (902)
T ss_dssp SSCCCEEEEEEET-TT----EEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTT
T ss_pred CCCCCEEEEEEcC-CC----EEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 5788999999999 43 79999999999999998887776664 667899999999999999999999999999998
Q ss_pred Ccee-----------EEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCC-----CccC
Q 021247 92 NASI-----------ATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKP-----TDKS 155 (315)
Q Consensus 92 ~~~~-----------~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~-----~~~~ 155 (315)
+... .....|..+|.+++|+|++...+++|+.|++| +||+++.+.+..+..+.+.+... ....
T Consensus 130 ~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 208 (902)
T 2oaj_A 130 DQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNE 208 (902)
T ss_dssp TEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTS
T ss_pred CccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCccccccccc
Confidence 7653 12245778999999999866667789999999 99999988877765431111000 0112
Q ss_pred CCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeee--e---cC-------------CccceEEEEEcC----CCC
Q 021247 156 SSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHH--L---EG-------------HFMPVRSLVYSP----VDP 213 (315)
Q Consensus 156 ~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~--~---~~-------------~~~~v~~~~~~~----~~~ 213 (315)
.|...|.+++|+|+|++|++++.|+.|++||+++++.+.. + .. |..+|.+++|++ +++
T Consensus 209 ~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~ 288 (902)
T 2oaj_A 209 KRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYT 288 (902)
T ss_dssp CBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEE
T ss_pred ccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCC
Confidence 3456799999999999999999999999999988876543 2 11 344788999954 223
Q ss_pred cEEEEEeCC-----CeEEEEe-----------------------------------------------------------
Q 021247 214 RVLFSASDD-----THVHMYD----------------------------------------------------------- 229 (315)
Q Consensus 214 ~~l~s~~~d-----~~i~~wd----------------------------------------------------------- 229 (315)
.++++|+.| ..+.+|+
T Consensus 289 ~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~ 368 (902)
T 2oaj_A 289 SLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLIL 368 (902)
T ss_dssp EEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEE
T ss_pred EEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEE
Confidence 556666443 1444444
Q ss_pred ------------CCCCeeEEE-----------------------------------------eecccccEEEEEEcCCCC
Q 021247 230 ------------AEGKSLVTA-----------------------------------------MSGHASWVLSVDASPDGA 256 (315)
Q Consensus 230 ------------~~~~~~~~~-----------------------------------------~~~~~~~i~~~~~~~~~~ 256 (315)
+..+..... +.+|...+..++|+|+++
T Consensus 369 ~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~ 448 (902)
T 2oaj_A 369 LILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGT 448 (902)
T ss_dssp EEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEE
T ss_pred EEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCc
Confidence 322211100 111222233345578899
Q ss_pred eEEEEeCCCcEEEEecCccceeh--cc---------cccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 257 AITTGSSDRTVKLWDLNMRAAMQ--SM---------TNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 257 ~l~s~~~d~~i~iwd~~~~~~~~--~~---------~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
+|+||+.|++|++||+..+.... .+ .+|...|++|+|+|+|++||+++.||+|+||++
T Consensus 449 ~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~ 517 (902)
T 2oaj_A 449 AFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKY 517 (902)
T ss_dssp EEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred EEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEe
Confidence 99999999999999998764211 11 178889999999999999999999999999997
No 73
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7.3e-39 Score=270.23 Aligned_cols=246 Identities=21% Similarity=0.307 Sum_probs=204.5
Q ss_pred ceeeccccccceEEEEe-----CC-CCCEEEEeeCCCeEEEEECCCC-------ceeEEeeCCcccEEEEEECCCCCeEE
Q 021247 52 LERTNTGHCLGVVSVAA-----HP-SGIIAASASLDSFVRVFDVDTN-------ASIATLEASPSEVWQMQFDPKGTTLA 118 (315)
Q Consensus 52 ~~~~~~~h~~~v~~~~~-----~~-~g~~l~s~~~d~~i~~w~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~ 118 (315)
+...+.+|...|.++.| ++ ++.+|++|+.|++|++||+... .....+..|...|.+++|+|++.. +
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~-l 91 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF-A 91 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE-E
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE-E
Confidence 34567899999999999 66 8999999999999999999753 345677889999999999999875 5
Q ss_pred EEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeee--e
Q 021247 119 VAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHH--L 196 (315)
Q Consensus 119 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~--~ 196 (315)
++++.|++|++||+++++.+..+. .|...|.+++|+|++++|++++.|+.|++||+........ .
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~~~~~-------------~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 158 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTYKRFV-------------GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEK 158 (343)
T ss_dssp EEEETTSEEEEEETTSSCEEEEEE-------------CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTT
T ss_pred EEEcCCCcEEEEECCCCcEEEEEc-------------CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecc
Confidence 688999999999999888776653 3455699999999999999999999999999974433222 2
Q ss_pred cCCccceEEEEEcCCC---------CcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcE
Q 021247 197 EGHFMPVRSLVYSPVD---------PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTV 267 (315)
Q Consensus 197 ~~~~~~v~~~~~~~~~---------~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i 267 (315)
..|...|.++.|+|.. ..++++++.|+.|++||. .......+.+|...|.+++|+|++++|++|+.|+.|
T Consensus 159 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v 237 (343)
T 2xzm_R 159 ENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKL 237 (343)
T ss_dssp TSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred cCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeE
Confidence 3688899999999854 268999999999999994 455667788999999999999999999999999999
Q ss_pred EEEecCccc-eehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 268 KLWDLNMRA-AMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 268 ~iwd~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
++||+.... ....+ .+...|++++|+|++.+++ ++.|+.|+||++
T Consensus 238 ~iwd~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la-~~~d~~v~iw~~ 283 (343)
T 2xzm_R 238 LIWDILNLTYPQREF-DAGSTINQIAFNPKLQWVA-VGTDQGVKIFNL 283 (343)
T ss_dssp EEEESSCCSSCSEEE-ECSSCEEEEEECSSSCEEE-EEESSCEEEEES
T ss_pred EEEECCCCcccceee-cCCCcEEEEEECCCCCEEE-EECCCCEEEEEe
Confidence 999995433 33333 3456799999999987665 567888999986
No 74
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-40 Score=308.73 Aligned_cols=299 Identities=14% Similarity=0.192 Sum_probs=224.7
Q ss_pred hhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeecccc------------------ccceEEEEeCCC
Q 021247 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGH------------------CLGVVSVAAHPS 71 (315)
Q Consensus 10 ~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h------------------~~~v~~~~~~~~ 71 (315)
..+|...|++++|+|... ..+++|+.||.| +||..+.+..+.+.+| ...|.+++|+|+
T Consensus 147 ~~~h~~~V~sl~~sp~~~---~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspd 222 (902)
T 2oaj_A 147 PAARLSPIVSIQWNPRDI---GTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPN 222 (902)
T ss_dssp SSSCCCCCCEEEEETTEE---EEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTT
T ss_pred cccCCCCeEEEEEccCCC---CEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCC
Confidence 468999999999999542 379999999999 9999887766655544 578999999999
Q ss_pred CCEEEEeeCCCeEEEEECCCCceeEE--ee---C-------------CcccEEEEEEC----CCCCeEEEEecCC-----
Q 021247 72 GIIAASASLDSFVRVFDVDTNASIAT--LE---A-------------SPSEVWQMQFD----PKGTTLAVAGGGS----- 124 (315)
Q Consensus 72 g~~l~s~~~d~~i~~w~~~~~~~~~~--~~---~-------------~~~~v~~~~~~----~~~~~~~~~~~~d----- 124 (315)
|.+|++++.|++|++||+.+++++.. +. . +..+|..++|+ |++..++++|+.+
T Consensus 223 g~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~ 302 (902)
T 2oaj_A 223 SLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDN 302 (902)
T ss_dssp SSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSC
T ss_pred CCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCC
Confidence 99999999999999999999887653 21 1 23479999995 4444666777554
Q ss_pred CeEEEEecCC------------------cceeeeecC------------C---------C-------------------C
Q 021247 125 ASVKLWDTAT------------------WNLIATLSI------------P---------R-------------------P 146 (315)
Q Consensus 125 ~~i~~~d~~~------------------~~~~~~~~~------------~---------~-------------------~ 146 (315)
..+.+|++.. .+....+.. + . +
T Consensus 303 ~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~ 382 (902)
T 2oaj_A 303 QSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYP 382 (902)
T ss_dssp CCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETT
T ss_pred ceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECC
Confidence 3677877310 000000000 0 0 0
Q ss_pred CCC--CC-----C----------------------------------ccCCCCcceEEEEECCCCCEEEEecCCCcEEEE
Q 021247 147 EGL--KP-----T----------------------------------DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 185 (315)
Q Consensus 147 ~~~--~~-----~----------------------------------~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~ 185 (315)
.+. .. . ...++...+..++|+|++++|++|+.|++|++|
T Consensus 383 ~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlW 462 (902)
T 2oaj_A 383 SGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIY 462 (902)
T ss_dssp TCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEE
T ss_pred CCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEE
Confidence 000 00 0 001122233445667899999999999999999
Q ss_pred Ecccceeee----e--ec-----CCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCC---------------------
Q 021247 186 DVTRAKFLH----H--LE-----GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGK--------------------- 233 (315)
Q Consensus 186 d~~~~~~~~----~--~~-----~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~--------------------- 233 (315)
|+.++.... . +. +|...|.+++|+| ++++|++|+.|++|++||..++
T Consensus 463 d~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafsp-dg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (902)
T 2oaj_A 463 DASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAA-ETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRF 541 (902)
T ss_dssp ESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEET-TTTEEEEEETTSCEEEEEEEECCC---------------CCSC
T ss_pred ECCCccccCCceEEeechhhcCCCCCCceeEEEecC-CCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeec
Confidence 998764211 1 11 7888999999999 6789999999999999998654
Q ss_pred ------------------------eeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCcccee-----hccc-c
Q 021247 234 ------------------------SLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAM-----QSMT-N 283 (315)
Q Consensus 234 ------------------------~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-----~~~~-~ 283 (315)
+++..+.+|.+.|++++|+|+| +||+|+.|++|++||++....+ ..+. +
T Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~g 620 (902)
T 2oaj_A 542 SLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGA 620 (902)
T ss_dssp CGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSS
T ss_pred cccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccc
Confidence 2356677899999999999999 9999999999999999876543 3454 8
Q ss_pred cccceEEEEEe-----eCC---CEEEEEeCCCcEEEeec
Q 021247 284 HTDQVWGVSFR-----PLG---GRVVSVSDDKSISLYEY 314 (315)
Q Consensus 284 ~~~~v~~~~~s-----~~~---~~l~s~~~d~~i~i~~~ 314 (315)
|.+.|++++|+ ||| .+|++++.|++|++||+
T Consensus 621 h~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 621 QSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp CCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred cccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 99999999999 885 79999999999999996
No 75
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=7.8e-39 Score=289.74 Aligned_cols=282 Identities=18% Similarity=0.260 Sum_probs=247.1
Q ss_pred hhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCC----cceeeccccccc-eEEEEeCC--CCCEEEEeeCCC
Q 021247 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDM----QLERTNTGHCLG-VVSVAAHP--SGIIAASASLDS 82 (315)
Q Consensus 10 ~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~----~~~~~~~~h~~~-v~~~~~~~--~g~~l~s~~~d~ 82 (315)
...|...|++++|+|+++ +|++++ |+.|++|+.++. +....+.+|... |.+++|+| ++.+|++++.|+
T Consensus 14 ~~~~~~~v~~~~~spdg~----~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg 88 (615)
T 1pgu_A 14 PSTQRNFTTHLSYDPTTN----AIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESG 88 (615)
T ss_dssp CCCCTTCCCCCEEETTTT----EEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTS
T ss_pred CCCccCceeEEEECCCCC----EEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCC
Confidence 458999999999999876 678877 899999999888 788888999999 99999999 999999999999
Q ss_pred eEEEEECCCC--------ceeEEeeCCcccEEEEEECCCCCeEEEEecCC----CeEEEEecCCcceeeeecCCCCCCCC
Q 021247 83 FVRVFDVDTN--------ASIATLEASPSEVWQMQFDPKGTTLAVAGGGS----ASVKLWDTATWNLIATLSIPRPEGLK 150 (315)
Q Consensus 83 ~i~~w~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d----~~i~~~d~~~~~~~~~~~~~~~~~~~ 150 (315)
.|++||+.++ .....+..+..+|.+++|+|+++.++++ +.+ +.|.+||. ++.+..+.
T Consensus 89 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~~~~~~~~v~~~d~--~~~~~~~~-------- 157 (615)
T 1pgu_A 89 KVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVV-GEGRDNFGVFISWDS--GNSLGEVS-------- 157 (615)
T ss_dssp EEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEE-ECCSSCSEEEEETTT--CCEEEECC--------
T ss_pred EEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEe-ccCCCCccEEEEEEC--CCcceeee--------
Confidence 9999999754 5566778889999999999999977554 444 68999983 34444332
Q ss_pred CCccCCCCcceEEEEECCCCC-EEEEecCCCcEEEEEcccceeeeeecCCcc---ceEEEEEcCCCCcEEEEEeCCCeEE
Q 021247 151 PTDKSSSKKFVLSVAWSPDGR-RIACGSMDGTISVFDVTRAKFLHHLEGHFM---PVRSLVYSPVDPRVLFSASDDTHVH 226 (315)
Q Consensus 151 ~~~~~~~~~~i~~~~~~~~~~-~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~s~~~d~~i~ 226 (315)
.|...|.+++|+|+++ .+++++.|+.|++||+.+++.+..+.+|.. .|.+++|+|.+++++++++.|+.|+
T Consensus 158 -----~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 232 (615)
T 1pgu_A 158 -----GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKIS 232 (615)
T ss_dssp -----SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEE
T ss_pred -----cCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEE
Confidence 3455699999999998 799999999999999999999999999999 9999999995388999999999999
Q ss_pred EEeCCCCeeEEEe-e---cccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehccccc----ccceEEEEEeeCCC
Q 021247 227 MYDAEGKSLVTAM-S---GHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNH----TDQVWGVSFRPLGG 298 (315)
Q Consensus 227 ~wd~~~~~~~~~~-~---~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~----~~~v~~~~~s~~~~ 298 (315)
+||++.++.+..+ . .|...|.+++|+ ++++|++++.|+.|++||+++++.+..+..+ ...+.++.|+ ++.
T Consensus 233 vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 310 (615)
T 1pgu_A 233 CFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNG 310 (615)
T ss_dssp EEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETT
T ss_pred EEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCC
Confidence 9999999888888 6 899999999999 9999999999999999999988887777665 4678888886 889
Q ss_pred EEEEEeCCCcEEEeec
Q 021247 299 RVVSVSDDKSISLYEY 314 (315)
Q Consensus 299 ~l~s~~~d~~i~i~~~ 314 (315)
++++++.|+.|++||+
T Consensus 311 ~l~~~~~~g~i~~~d~ 326 (615)
T 1pgu_A 311 RIISLSLDGTLNFYEL 326 (615)
T ss_dssp EEEEEETTSCEEEEET
T ss_pred eEEEEECCCCEEEEEC
Confidence 9999999999999996
No 76
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.2e-38 Score=277.83 Aligned_cols=277 Identities=22% Similarity=0.359 Sum_probs=233.6
Q ss_pred hhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeC--CCCCEEEEeeCCCeEEE
Q 021247 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAH--PSGIIAASASLDSFVRV 86 (315)
Q Consensus 9 ~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~--~~g~~l~s~~~d~~i~~ 86 (315)
...+|...|++++|+|.. ++++|+.||+|++||..+.+....+.+|..+|.+++++ +++.++++++.|++|++
T Consensus 157 ~~~~h~~~V~~l~~~~~~-----~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~v 231 (464)
T 3v7d_B 157 QLSGHDGGVWALKYAHGG-----ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHV 231 (464)
T ss_dssp EECCCSSCEEEEEECSTT-----EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEE
T ss_pred EEeCCCcCEEEEEEcCCC-----EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEE
Confidence 356899999999998754 79999999999999999988888889999999999988 67899999999999999
Q ss_pred EECCCCce-----------------------eEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecC
Q 021247 87 FDVDTNAS-----------------------IATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSI 143 (315)
Q Consensus 87 w~~~~~~~-----------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~ 143 (315)
||+.+... +..+..|...+.++. ++++ ++++++.|+.|++||+++++.+..+.
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~- 307 (464)
T 3v7d_B 232 WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--GHGN-IVVSGSYDNTLIVWDVAQMKCLYILS- 307 (464)
T ss_dssp EECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--EETT-EEEEEETTSCEEEEETTTTEEEEEEC-
T ss_pred eeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--CCCC-EEEEEeCCCeEEEEECCCCcEEEEec-
Confidence 99987653 345666777777764 4555 45678899999999999888776663
Q ss_pred CCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCC
Q 021247 144 PRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 223 (315)
Q Consensus 144 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~ 223 (315)
.|...|.+++|+|+++++++|+.||.|++||+++++.+..+.+|...|.++.|++ .++++++.|+
T Consensus 308 ------------~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg 372 (464)
T 3v7d_B 308 ------------GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD---KFLVSAAADG 372 (464)
T ss_dssp ------------CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS---SEEEEEETTS
T ss_pred ------------CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC---CEEEEEeCCC
Confidence 2345599999999999999999999999999999999999999999999999973 6899999999
Q ss_pred eEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehc-ccccccceEEEEEeeCCCEEEE
Q 021247 224 HVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS-MTNHTDQVWGVSFRPLGGRVVS 302 (315)
Q Consensus 224 ~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s 302 (315)
.|++||+++....... .|...+..++++|+++++++|+ |+.|++||+++++.+.. +..|...|++++|+ ....+++
T Consensus 373 ~v~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~ 449 (464)
T 3v7d_B 373 SIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAA 449 (464)
T ss_dssp EEEEEETTTCCEEEEE-ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEE
T ss_pred cEEEEECCCCceeeee-cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEE
Confidence 9999999987655444 3566677889999999999988 99999999999988875 66788999999997 3344556
Q ss_pred EeCCCcEEEe
Q 021247 303 VSDDKSISLY 312 (315)
Q Consensus 303 ~~~d~~i~i~ 312 (315)
++.||.+.+|
T Consensus 450 ~~~~g~~~i~ 459 (464)
T 3v7d_B 450 VEKDGQSFLE 459 (464)
T ss_dssp EEETTEEEEE
T ss_pred EEeCCeEEEE
Confidence 6777755544
No 77
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=9.4e-40 Score=281.53 Aligned_cols=280 Identities=19% Similarity=0.272 Sum_probs=229.7
Q ss_pred EEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCC----cceeeccccccceEEEEeCC-CCCEEEEeeCCCeEEEEECCCC
Q 021247 18 WAVTWVPATETRPALLLTGSLDETVKLWRPDDM----QLERTNTGHCLGVVSVAAHP-SGIIAASASLDSFVRVFDVDTN 92 (315)
Q Consensus 18 ~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~----~~~~~~~~h~~~v~~~~~~~-~g~~l~s~~~d~~i~~w~~~~~ 92 (315)
..++++|.. ..++++|+.||.|++|+.... .....+.+|..+|.+++|+| ++.+|++++.|++|++||+.++
T Consensus 38 ~~~~~~~~~---~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 38 GFCAVNPKF---MALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp CSEEECSSE---EEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred CcEEECCCe---EEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 345565533 246667899999999998653 23445678999999999999 8999999999999999999987
Q ss_pred -------ceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEE
Q 021247 93 -------ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVA 165 (315)
Q Consensus 93 -------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 165 (315)
..+..+..|...|.+++|+|++..++++++.|+.|++||+++++.+..+.. ..|...|.+++
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----------~~~~~~v~~~~ 183 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP-----------DVHPDTIYSVD 183 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT-----------TTCCSCEEEEE
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec-----------CCCCCceEEEE
Confidence 567788899999999999999866778899999999999998877766521 12445699999
Q ss_pred ECCCCCEEEEecCCCcEEEEEcccceeeeee-cCCccc-eEEEEEcCCCCcEEEEE---eCCCeEEEEeCCCCee-EEE-
Q 021247 166 WSPDGRRIACGSMDGTISVFDVTRAKFLHHL-EGHFMP-VRSLVYSPVDPRVLFSA---SDDTHVHMYDAEGKSL-VTA- 238 (315)
Q Consensus 166 ~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~l~s~---~~d~~i~~wd~~~~~~-~~~- 238 (315)
|+|++++|++++.|+.|++||+++++.+..+ ..|... +..+.|+| ++++++++ +.|+.|++||.+.... +..
T Consensus 184 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~ 262 (402)
T 2aq5_A 184 WSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVS-EGKILTTGFSRMSERQVALWDTKHLEEPLSLQ 262 (402)
T ss_dssp ECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECS-TTEEEEEEECTTCCEEEEEEETTBCSSCSEEE
T ss_pred ECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcC-CCcEEEEeccCCCCceEEEEcCccccCCceEE
Confidence 9999999999999999999999999988888 678765 89999998 67788888 7899999999987543 222
Q ss_pred eecccccEEEEEEcCCCCeEEE-EeCCCcEEEEecCccce-ehcccc--cccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 239 MSGHASWVLSVDASPDGAAITT-GSSDRTVKLWDLNMRAA-MQSMTN--HTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 239 ~~~~~~~i~~~~~~~~~~~l~s-~~~d~~i~iwd~~~~~~-~~~~~~--~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
...|...+.+++|+|++++|++ |+.|+.|++||+..++. +..+.. |...+.+++|+|++.++++ .++.+++|++
T Consensus 263 ~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l 340 (402)
T 2aq5_A 263 ELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKL 340 (402)
T ss_dssp ECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEE
T ss_pred eccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEc
Confidence 2357778999999999998864 55799999999998764 444444 4589999999999987764 5679999986
No 78
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-38 Score=271.58 Aligned_cols=251 Identities=22% Similarity=0.382 Sum_probs=211.6
Q ss_pred ceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECC--CCceeEEeeCCcccEEEEEECCC--CCeEEEEecCCCeE
Q 021247 52 LERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD--TNASIATLEASPSEVWQMQFDPK--GTTLAVAGGGSASV 127 (315)
Q Consensus 52 ~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i 127 (315)
+...+.+|..+|.+++|+|++.+|++++.|+.|++||+. +...+..+..|..+|.+++|+|+ ++ ++++++.|+.|
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~~~dg~v 81 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGKV 81 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSCE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCC-EEEEeccCCEE
Confidence 445677899999999999999999999999999999998 44566778889999999999876 55 55788899999
Q ss_pred EEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCC--CCEEEEecCCCcEEEEEcccce--eeeeecCCccce
Q 021247 128 KLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD--GRRIACGSMDGTISVFDVTRAK--FLHHLEGHFMPV 203 (315)
Q Consensus 128 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~s~dg~i~i~d~~~~~--~~~~~~~~~~~v 203 (315)
++||+.+++....... ..+...|.+++|+|+ +++|++++.|+.|++||++... ....+..|...|
T Consensus 82 ~iwd~~~~~~~~~~~~-----------~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v 150 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVH-----------AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV 150 (379)
T ss_dssp EEEEEETTEEEEEEEE-----------CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCE
T ss_pred EEEEcCCCceeEeeee-----------cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCce
Confidence 9999988763222211 124456999999999 9999999999999999998763 344567899999
Q ss_pred EEEEEcCC------------CCcEEEEEeCCCeEEEEeCCCCe----eEEEeecccccEEEEEEcCC---CCeEEEEeCC
Q 021247 204 RSLVYSPV------------DPRVLFSASDDTHVHMYDAEGKS----LVTAMSGHASWVLSVDASPD---GAAITTGSSD 264 (315)
Q Consensus 204 ~~~~~~~~------------~~~~l~s~~~d~~i~~wd~~~~~----~~~~~~~~~~~i~~~~~~~~---~~~l~s~~~d 264 (315)
.++.|+|. ++.++++++.|+.|++||++... ....+.+|...|.+++|+|+ +.+|++++.|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d 230 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD 230 (379)
T ss_dssp EEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred EEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCC
Confidence 99999995 57899999999999999987543 45567789999999999999 8999999999
Q ss_pred CcEEEEecCccc-----eehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 265 RTVKLWDLNMRA-----AMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 265 ~~i~iwd~~~~~-----~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
|.|++||++.+. .+.....|...|++++|+|+|++|++++.||.|+||++
T Consensus 231 g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~ 285 (379)
T 3jrp_A 231 RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 285 (379)
T ss_dssp SCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEE
T ss_pred CEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeC
Confidence 999999998753 23334458889999999999999999999999999996
No 79
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=7.8e-38 Score=304.37 Aligned_cols=297 Identities=19% Similarity=0.321 Sum_probs=253.3
Q ss_pred hhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCC--CCCEEEEeeCCCeEEEE
Q 021247 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHP--SGIIAASASLDSFVRVF 87 (315)
Q Consensus 10 ~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~--~g~~l~s~~~d~~i~~w 87 (315)
..+|.+.|++++|+|++. +|++|+.|+.|++||..+++....+.+|...|.++.|+| ++.++++++.|+.|++|
T Consensus 653 ~~~h~~~v~~~~~s~~~~----~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vw 728 (1249)
T 3sfz_A 653 IKAHEDEVLCCAFSSDDS----YIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLW 728 (1249)
T ss_dssp ECCCSSCEEEEEECTTSS----EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEE
T ss_pred eccCCCCEEEEEEecCCC----EEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEE
Confidence 468999999999999765 799999999999999999998889999999999999999 55689999999999999
Q ss_pred ECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCC-----------------C
Q 021247 88 DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGL-----------------K 150 (315)
Q Consensus 88 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~-----------------~ 150 (315)
|+.++.++..+..|...|.+++|+|+++.+ ++++.|++|++||+++++....+........ .
T Consensus 729 d~~~~~~~~~~~~h~~~v~~~~~sp~~~~l-~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 807 (1249)
T 3sfz_A 729 DLNQKECRNTMFGHTNSVNHCRFSPDDELL-ASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWS 807 (1249)
T ss_dssp ETTSSSEEEEECCCSSCEEEEEECSSTTEE-EEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBC
T ss_pred ECCCcchhheecCCCCCEEEEEEecCCCEE-EEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEEC
Confidence 999999999999999999999999998854 6788999999999998776655533210000 0
Q ss_pred -------------------------CCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEE
Q 021247 151 -------------------------PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRS 205 (315)
Q Consensus 151 -------------------------~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~ 205 (315)
......+...+.+++|+|+++++++++.|+.|++||+.++.....+.+|...|.+
T Consensus 808 ~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~ 887 (1249)
T 3sfz_A 808 ADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHG 887 (1249)
T ss_dssp TTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEE
Confidence 0001145567889999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCcEEEEEeCCCeEEEEeCC------------------------------------------------------
Q 021247 206 LVYSPVDPRVLFSASDDTHVHMYDAE------------------------------------------------------ 231 (315)
Q Consensus 206 ~~~~~~~~~~l~s~~~d~~i~~wd~~------------------------------------------------------ 231 (315)
+.|+| ++.++++++.|+.|++||..
T Consensus 888 v~~sp-dg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 966 (1249)
T 3sfz_A 888 VMFSP-DGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSC 966 (1249)
T ss_dssp EEECT-TSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEE
T ss_pred EEECC-CCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEE
Confidence 99998 67789999999999999842
Q ss_pred -------------------------CCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehccccccc
Q 021247 232 -------------------------GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTD 286 (315)
Q Consensus 232 -------------------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 286 (315)
.+.....+.+|...|.+++|+|++++|++++.|+.|++||+.+++... ...|..
T Consensus 967 ~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~ 1045 (1249)
T 3sfz_A 967 CCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVF-LQAHQE 1045 (1249)
T ss_dssp EEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEEC-CBCCSS
T ss_pred EEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEE-EecCCC
Confidence 122233445688899999999999999999999999999999887664 457889
Q ss_pred ceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 287 QVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 287 ~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
.+.++.|+|++ .+++++.|++|++||+
T Consensus 1046 ~v~~~~~~~~~-~l~~~~~dg~v~vwd~ 1072 (1249)
T 3sfz_A 1046 TVKDFRLLQDS-RLLSWSFDGTVKVWNV 1072 (1249)
T ss_dssp CEEEEEECSSS-EEEEEESSSEEEEEET
T ss_pred cEEEEEEcCCC-cEEEEECCCcEEEEEC
Confidence 99999999965 6899999999999996
No 80
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-38 Score=272.06 Aligned_cols=252 Identities=23% Similarity=0.297 Sum_probs=212.1
Q ss_pred hhhhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCC--CCcceeeccccccceEEEEeCCC--CCEEEEeeCCC
Q 021247 7 KSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPD--DMQLERTNTGHCLGVVSVAAHPS--GIIAASASLDS 82 (315)
Q Consensus 7 ~~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~--~~~~~~~~~~h~~~v~~~~~~~~--g~~l~s~~~d~ 82 (315)
..++.+|.+.|++++|+|++. +|++|+.||.|++|+.. +.+....+.+|..+|.+++|+++ +.+|++++.|+
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~----~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGK----RLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSS----EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred cEEecCCcccEEEEEEcCCCC----EEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence 346689999999999999765 79999999999999987 45566678899999999999987 99999999999
Q ss_pred eEEEEECCCCc--eeEEeeCCcccEEEEEECCC--CCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCC
Q 021247 83 FVRVFDVDTNA--SIATLEASPSEVWQMQFDPK--GTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSK 158 (315)
Q Consensus 83 ~i~~w~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (315)
.|++||+.+++ .+..+..|...|.+++|+|+ +.. +++++.|+.|++||++..+...... ...+.
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-l~~~~~d~~i~v~d~~~~~~~~~~~-----------~~~~~ 147 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPL-LLVASSDGKVSVVEFKENGTTSPII-----------IDAHA 147 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSE-EEEEETTSEEEEEECCTTSCCCEEE-----------EECCT
T ss_pred EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCE-EEEecCCCcEEEEecCCCCceeeEE-----------ecCCC
Confidence 99999999987 66777788899999999998 664 5678899999999998754332221 12345
Q ss_pred cceEEEEECC-------------CCCEEEEecCCCcEEEEEcccce----eeeeecCCccceEEEEEcCCC--CcEEEEE
Q 021247 159 KFVLSVAWSP-------------DGRRIACGSMDGTISVFDVTRAK----FLHHLEGHFMPVRSLVYSPVD--PRVLFSA 219 (315)
Q Consensus 159 ~~i~~~~~~~-------------~~~~l~~~s~dg~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~~~--~~~l~s~ 219 (315)
..|.+++|+| ++++|++++.|+.|++||++++. ....+.+|...|.+++|+|.+ +.+|+++
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~ 227 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV 227 (379)
T ss_dssp TCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred CceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEE
Confidence 5699999999 69999999999999999997653 456778899999999999954 7899999
Q ss_pred eCCCeEEEEeCCCCe---eEE--EeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCc
Q 021247 220 SDDTHVHMYDAEGKS---LVT--AMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274 (315)
Q Consensus 220 ~~d~~i~~wd~~~~~---~~~--~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 274 (315)
+.|+.|++||++.+. ... ....|...|.+++|+|++++|++++.||.|++|+++.
T Consensus 228 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 228 SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp ETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred eCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 999999999988753 122 2234888999999999999999999999999999873
No 81
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2e-37 Score=263.63 Aligned_cols=244 Identities=21% Similarity=0.248 Sum_probs=213.8
Q ss_pred cccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCc--eeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCC
Q 021247 57 TGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA--SIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT 134 (315)
Q Consensus 57 ~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~ 134 (315)
..|..+|.+++|+|++.++++++.|+.|++||+.+++ .+..+..|...|.+++|+|+++.+ ++++.|+.|++||+.+
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRI-VTCGTDRNAYVWTLKG 83 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEE-EEEETTSCEEEEEEET
T ss_pred cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEE-EEEcCCCeEEEEECCC
Confidence 3488899999999999999999999999999999887 778888899999999999998865 6778999999999987
Q ss_pred cceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEccccee----eeeecCCccceEEEEEcC
Q 021247 135 WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF----LHHLEGHFMPVRSLVYSP 210 (315)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~ 210 (315)
.+....... ..+...|.+++|+|++++|++++.|+.|++||+..+.. ......|...|.++.|+|
T Consensus 84 ~~~~~~~~~-----------~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 152 (372)
T 1k8k_C 84 RTWKPTLVI-----------LRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP 152 (372)
T ss_dssp TEEEEEEEC-----------CCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT
T ss_pred CeeeeeEEe-----------ecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC
Confidence 765544322 12345699999999999999999999999999987652 233356889999999999
Q ss_pred CCCcEEEEEeCCCeEEEEeCC------------------CCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEec
Q 021247 211 VDPRVLFSASDDTHVHMYDAE------------------GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272 (315)
Q Consensus 211 ~~~~~l~s~~~d~~i~~wd~~------------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~ 272 (315)
+++++++++.|+.|++||++ .++.+..+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 153 -~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 231 (372)
T 1k8k_C 153 -NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADA 231 (372)
T ss_dssp -TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEG
T ss_pred -CCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 67899999999999999953 56777888899999999999999999999999999999999
Q ss_pred CccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 273 NMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 273 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
+.++.+..+..|...+.+++|+|++.+|+++ .|+.|++|++
T Consensus 232 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~ 272 (372)
T 1k8k_C 232 DKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTY 272 (372)
T ss_dssp GGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEE
T ss_pred CCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEc
Confidence 9999999999999999999999999877766 9999999986
No 82
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=9.7e-38 Score=267.14 Aligned_cols=250 Identities=17% Similarity=0.211 Sum_probs=208.7
Q ss_pred CcceeeccccccceEEEEeCCCC-CEEEEeeCCCeEEEEECCCCceeEEee--CCcccEEEEEECCCCCeEEEEecCCCe
Q 021247 50 MQLERTNTGHCLGVVSVAAHPSG-IIAASASLDSFVRVFDVDTNASIATLE--ASPSEVWQMQFDPKGTTLAVAGGGSAS 126 (315)
Q Consensus 50 ~~~~~~~~~h~~~v~~~~~~~~g-~~l~s~~~d~~i~~w~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~d~~ 126 (315)
.++.+.+.+|...|.+++|+|++ .++++++.|+.|++||+.+++....+. .|...|.+++|+|++..++++++.|+.
T Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~ 142 (383)
T 3ei3_B 63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGA 142 (383)
T ss_dssp CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTE
T ss_pred cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCE
Confidence 34455667899999999999999 999999999999999999888776665 588999999999955556788899999
Q ss_pred EEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEE
Q 021247 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSL 206 (315)
Q Consensus 127 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~ 206 (315)
|++||++. +.+..+... ..+...|.+++|+|++++|++++.|+.|++||+ +++.+..+..|...|.++
T Consensus 143 i~iwd~~~-~~~~~~~~~----------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~ 210 (383)
T 3ei3_B 143 TTLRDFSG-SVIQVFAKT----------DSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHA 210 (383)
T ss_dssp EEEEETTS-CEEEEEECC----------CCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEE
T ss_pred EEEEECCC-CceEEEecc----------CCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEE
Confidence 99999986 333333221 123456999999999999999999999999999 577788888999999999
Q ss_pred EEcCCCCcEEEEEeCCCeEEEEeCCC----CeeEEEeecccccEEEEEEcC-CCCeEEEEeCCCcEEEEecCccceehcc
Q 021247 207 VYSPVDPRVLFSASDDTHVHMYDAEG----KSLVTAMSGHASWVLSVDASP-DGAAITTGSSDRTVKLWDLNMRAAMQSM 281 (315)
Q Consensus 207 ~~~~~~~~~l~s~~~d~~i~~wd~~~----~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 281 (315)
+|+|.+..++++++.|+.|++||++. +..+..+ +|...|.+++|+| ++++|++++.|+.|++||+++++....+
T Consensus 211 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 289 (383)
T 3ei3_B 211 EFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQI 289 (383)
T ss_dssp EECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEE
T ss_pred EECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccc
Confidence 99996555999999999999999986 5555555 6999999999999 9999999999999999999988776665
Q ss_pred cccc-----------------cceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 282 TNHT-----------------DQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 282 ~~~~-----------------~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
..|. ..+..++|+|++++ +++.|++|+|||+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~ 337 (383)
T 3ei3_B 290 IIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDA 337 (383)
T ss_dssp EECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEET
T ss_pred ccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEec
Confidence 5442 34445777777766 8889999999996
No 83
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.9e-37 Score=257.22 Aligned_cols=250 Identities=26% Similarity=0.355 Sum_probs=213.2
Q ss_pred CCcceeeccccccceEEEEeCCC-CCEEEEeeCCCeEEEEECCCCc-----eeEEeeCCcccEEEEEECCCCCeEEEEec
Q 021247 49 DMQLERTNTGHCLGVVSVAAHPS-GIIAASASLDSFVRVFDVDTNA-----SIATLEASPSEVWQMQFDPKGTTLAVAGG 122 (315)
Q Consensus 49 ~~~~~~~~~~h~~~v~~~~~~~~-g~~l~s~~~d~~i~~w~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 122 (315)
+.++..++.||.++|++++|+|+ +.+|+||+.|++|++||+.+.+ +...+..|...|.+++|+|+++++ ++++
T Consensus 27 ~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l-~s~~ 105 (340)
T 4aow_A 27 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFA-LSGS 105 (340)
T ss_dssp EEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEE-EEEE
T ss_pred ceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEE-EEEc
Confidence 34455678999999999999997 6899999999999999997654 456778899999999999998865 6788
Q ss_pred CCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEccccee-eeeecCCcc
Q 021247 123 GSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF-LHHLEGHFM 201 (315)
Q Consensus 123 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~-~~~~~~~~~ 201 (315)
.|+.|++|+............ +...+..+.+++++++|++++.|+.+++||+..... .....+|..
T Consensus 106 ~d~~i~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~ 172 (340)
T 4aow_A 106 WDGTLRLWDLTTGTTTRRFVG-------------HTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSE 172 (340)
T ss_dssp TTSEEEEEETTTTEEEEEEEC-------------CSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSS
T ss_pred ccccceEEeecccceeeeecC-------------CCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccC
Confidence 999999999987665544432 223477889999999999999999999999876544 345567899
Q ss_pred ceEEEEEcCCC-CcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehc
Q 021247 202 PVRSLVYSPVD-PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS 280 (315)
Q Consensus 202 ~v~~~~~~~~~-~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 280 (315)
.+..+.|++.. ..++++++.|+.|++||.+.++.+..+.+|...|.+++|+|++++|++|+.|+.|++||++..+.+..
T Consensus 173 ~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 252 (340)
T 4aow_A 173 WVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT 252 (340)
T ss_dssp CEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE
T ss_pred cccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeee
Confidence 99999998854 35778999999999999999999999999999999999999999999999999999999999888877
Q ss_pred ccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 281 ~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
+..+ ..+.++.|+|++ ++++++.|+.|+|||+
T Consensus 253 ~~~~-~~v~~~~~~~~~-~~~~~~~d~~i~iwd~ 284 (340)
T 4aow_A 253 LDGG-DIINALCFSPNR-YWLCAATGPSIKIWDL 284 (340)
T ss_dssp EECS-SCEEEEEECSSS-SEEEEEETTEEEEEET
T ss_pred ecCC-ceEEeeecCCCC-ceeeccCCCEEEEEEC
Confidence 7654 689999999986 4667778999999986
No 84
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.1e-37 Score=288.15 Aligned_cols=288 Identities=20% Similarity=0.251 Sum_probs=243.0
Q ss_pred hhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEE
Q 021247 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFD 88 (315)
Q Consensus 9 ~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~ 88 (315)
...+|..+|.+++|+|.++ +|++|+.||.|++|+..+++....+.+|...|.+++|+|++.++++++.|+.|++||
T Consensus 50 ~~~~~~~~v~~~~~s~~~~----~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 125 (814)
T 3mkq_A 50 SIQVTETPVRAGKFIARKN----WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWN 125 (814)
T ss_dssp EEECCSSCEEEEEEEGGGT----EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred EEecCCCcEEEEEEeCCCC----EEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEE
Confidence 3457999999999999875 799999999999999999888888889999999999999999999999999999999
Q ss_pred CCCC-ceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEEC
Q 021247 89 VDTN-ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS 167 (315)
Q Consensus 89 ~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 167 (315)
+.++ .....+..|...|.+++|+|.+...+++++.|++|++||+++.+....+... +...+.+++|+
T Consensus 126 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~------------~~~~v~~~~~~ 193 (814)
T 3mkq_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG------------QERGVNYVDYY 193 (814)
T ss_dssp GGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECC------------CTTCCCEEEEC
T ss_pred CCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecC------------CCCCEEEEEEE
Confidence 9987 5667788899999999999944446678889999999999876655444321 22348899999
Q ss_pred C--CCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeeccccc
Q 021247 168 P--DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASW 245 (315)
Q Consensus 168 ~--~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~ 245 (315)
| ++.+|++++.||.|++||+.+++.+..+.+|...|.++.|+| ++.++++++.|+.|++||..+++.+..+..|...
T Consensus 194 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~ 272 (814)
T 3mkq_A 194 PLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLER 272 (814)
T ss_dssp CSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCSEEEEECCSSSS
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCc
Confidence 9 999999999999999999999999999999999999999999 6679999999999999999999999999999999
Q ss_pred EEEEEEcCCCCe-EEEEeCCCcEEEEecCccceehc-------------------------------------------c
Q 021247 246 VLSVDASPDGAA-ITTGSSDRTVKLWDLNMRAAMQS-------------------------------------------M 281 (315)
Q Consensus 246 i~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~~~~~~-------------------------------------------~ 281 (315)
+.+++|+|++.. +++++.++.+.+|++........ .
T Consensus 273 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (814)
T 3mkq_A 273 SWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKEL 352 (814)
T ss_dssp EEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEE
T ss_pred EEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecC
Confidence 999999999863 34455577788888754221110 1
Q ss_pred cccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 282 TNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 282 ~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
..+...+.+++|+|+|++|++++ |+.+.||++
T Consensus 353 ~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~ 384 (814)
T 3mkq_A 353 GSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTA 384 (814)
T ss_dssp CCCSSCCSEEEECTTSSEEEEEE-TTEEEEEET
T ss_pred CCCccCCceeEECCCCCEEEEec-CCEEEEEEC
Confidence 22334578899999999888888 899999985
No 85
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.6e-39 Score=273.32 Aligned_cols=241 Identities=17% Similarity=0.179 Sum_probs=198.3
Q ss_pred cccceEEEEeCCCCCEEEEeeCCCeEEEEECCCC--ceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcc
Q 021247 59 HCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN--ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWN 136 (315)
Q Consensus 59 h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~ 136 (315)
+..+|.+++|+|+|.+|++++.|+.|++||+.++ +.+..+..|...|.+++|+|+++.+ ++++.|++|++||+.+.+
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRI-VTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCE-EEEETTSSEEEC------
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEE-EEEeCCCeEEEEEcCCCC
Confidence 5568999999999999999999999999999988 6777888899999999999998755 678899999999998765
Q ss_pred -eeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccce---eeeeecC-CccceEEEEEcCC
Q 021247 137 -LIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK---FLHHLEG-HFMPVRSLVYSPV 211 (315)
Q Consensus 137 -~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~---~~~~~~~-~~~~v~~~~~~~~ 211 (315)
..... ....|...|.+++|+|++++|++++.|+.|++||+++++ ....+.. |...|.+++|+|
T Consensus 89 ~~~~~~-----------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~- 156 (377)
T 3dwl_C 89 TWKQTL-----------VLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP- 156 (377)
T ss_dssp CCCCEE-----------ECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECT-
T ss_pred ceeeee-----------EecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcC-
Confidence 11111 112355669999999999999999999999999998876 3667777 999999999999
Q ss_pred CCcEEEEEeCCCeEEEEeCC------------------CCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecC
Q 021247 212 DPRVLFSASDDTHVHMYDAE------------------GKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLN 273 (315)
Q Consensus 212 ~~~~l~s~~~d~~i~~wd~~------------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~ 273 (315)
++++|++++.|+.|++||++ .++++..+ +|...|.+++|+|++++|++++.|+.|++||++
T Consensus 157 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~ 235 (377)
T 3dwl_C 157 NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPS 235 (377)
T ss_dssp TSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEEC
T ss_pred CCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 67899999999999999985 23455555 899999999999999999999999999999999
Q ss_pred ccce----ehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 274 MRAA----MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 274 ~~~~----~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
.++. +..+.+|...|++++|+|++++|+++++|+.+ +|+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~ 279 (377)
T 3dwl_C 236 APEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQG 279 (377)
T ss_dssp STTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECC
T ss_pred CCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEe
Confidence 8877 78889999999999999999988888776666 6653
No 86
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.3e-36 Score=264.18 Aligned_cols=280 Identities=17% Similarity=0.156 Sum_probs=237.6
Q ss_pred cceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCccee-----eccccccceEEEEeCCCCCEEEEeeCCCeEEEEEC
Q 021247 15 ESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLER-----TNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDV 89 (315)
Q Consensus 15 ~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~-----~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~ 89 (315)
..+.+++|+|.. .++++++.|+.|++||..+.+..+ ...+|...+.++.+++++.++++++.|+.|++||+
T Consensus 123 ~~~~~~~~s~~~----~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~ 198 (433)
T 3bws_A 123 FQPKSVRFIDNT----RLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDL 198 (433)
T ss_dssp SCBCCCEESSSS----EEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEET
T ss_pred CCceEEEEeCCC----eEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEEC
Confidence 456688998832 378888889999999998887766 34578889999999999999999999999999999
Q ss_pred CCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCC
Q 021247 90 DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169 (315)
Q Consensus 90 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 169 (315)
.+++.+..+..+...+..++|+|+++.+++++..++.|++||+++++.+..+.. ...+.+++|+|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~--------------~~~~~~~~~~~~ 264 (433)
T 3bws_A 199 KTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK--------------IGLPRGLLLSKD 264 (433)
T ss_dssp TTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC--------------CSEEEEEEECTT
T ss_pred CCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC--------------CCCceEEEEcCC
Confidence 999988888888889999999999998888888899999999998877655432 123789999999
Q ss_pred CCEEEEec--------CCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeec
Q 021247 170 GRRIACGS--------MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSG 241 (315)
Q Consensus 170 ~~~l~~~s--------~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 241 (315)
++++++++ .|+.|++||+.+++....+ .|...+..++|+|++..++++++.|+.|++||.++++.+..+.
T Consensus 265 g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~- 342 (433)
T 3bws_A 265 GKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP- 342 (433)
T ss_dssp SSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-
T ss_pred CCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-
Confidence 99998887 5889999999988776655 3455788999999666677888999999999999888777665
Q ss_pred ccccEEEEEEcCCCCeEEEEeC---------------CCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeC-
Q 021247 242 HASWVLSVDASPDGAAITTGSS---------------DRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSD- 305 (315)
Q Consensus 242 ~~~~i~~~~~~~~~~~l~s~~~---------------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~- 305 (315)
+...+.+++|+|+++++++++. ||.|++||+.+++.+..+.. ...+.+++|+|+|++|++++.
T Consensus 343 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~ 421 (433)
T 3bws_A 343 VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFL 421 (433)
T ss_dssp CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETT
T ss_pred CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECC
Confidence 6677999999999998888877 57999999999888777765 457899999999999988775
Q ss_pred CCcEEEeecC
Q 021247 306 DKSISLYEYS 315 (315)
Q Consensus 306 d~~i~i~~~~ 315 (315)
|++|++|+++
T Consensus 422 d~~i~v~~~~ 431 (433)
T 3bws_A 422 DHQIRVYRRD 431 (433)
T ss_dssp TTEEEEEEET
T ss_pred CCeEEEEEec
Confidence 9999999974
No 87
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=8.2e-37 Score=258.81 Aligned_cols=275 Identities=12% Similarity=0.143 Sum_probs=211.2
Q ss_pred hhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEE-EEeeCCCeEEEE
Q 021247 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIA-ASASLDSFVRVF 87 (315)
Q Consensus 9 ~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l-~s~~~d~~i~~w 87 (315)
...+|.+.|++++|+|++. +|++|+.|+ +++|+.++.+..... +..++..+.+.+++..+ ++++.|++|++|
T Consensus 14 ~~~~h~~~V~~v~fs~dg~----~la~g~~~~-~~iw~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~v~iW 86 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQS----CLILSTLKS-FEIYNVHPVAHIMSQ--EMRHLSKVRMLHRTNYVAFVTGVKEVVHIW 86 (355)
T ss_dssp -----CCCCCEEEECTTSS----EEEEECSSE-EEEEEETTEEEEEEE--ECSCCCEEEECTTSSEEEEECSSTTEEEEE
T ss_pred ccccCCCceEEEEECCCCC----EEEEEcCCE-EEEEecCCcceeeee--ecCCeEEEEEcCCCCEEEEEECCccEEEEE
Confidence 3478999999999999875 688777664 789998765544332 22357778888888776 578888999999
Q ss_pred ECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCc-ceeeeecCCCCCCCCCCccCCCCcceEEEEE
Q 021247 88 DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATW-NLIATLSIPRPEGLKPTDKSSSKKFVLSVAW 166 (315)
Q Consensus 88 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 166 (315)
|..+++.+..+. +..+|.+++++++. ++++ .++.|++||+.+. +.+..+.. ....+++
T Consensus 87 d~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~--~~~~i~i~d~~~~~~~~~~~~~----------------~~~~~~~ 145 (355)
T 3vu4_A 87 DDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS--YGDVISVFKFGNPWKRITDDIR----------------FGGVCEF 145 (355)
T ss_dssp ETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE--ETTEEEEEESSTTCCBSSCCEE----------------EEEEEEE
T ss_pred ECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE--EcCEEEEEECCCCceeeEEecc----------------CCceEEE
Confidence 999999888887 55689999998763 3332 4789999999875 43332211 2345566
Q ss_pred CCCCCEEEE--ecCCCcEEEEEcccce----------------eeeeecCCccceEEEEEcCCCCcEEEEEeCCCe-EEE
Q 021247 167 SPDGRRIAC--GSMDGTISVFDVTRAK----------------FLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTH-VHM 227 (315)
Q Consensus 167 ~~~~~~l~~--~s~dg~i~i~d~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~-i~~ 227 (315)
++ .+++. |+.||.|++||+.+++ .+..+.+|..+|.+++|+| ++++|++++.|++ |++
T Consensus 146 s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~i 222 (355)
T 3vu4_A 146 SN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRV 222 (355)
T ss_dssp ET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEE
T ss_pred Ec--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEE
Confidence 66 55555 6899999999998765 2677889999999999999 7789999999998 999
Q ss_pred EeCCCCeeEEEee-c-ccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceeh--ccc---------------------
Q 021247 228 YDAEGKSLVTAMS-G-HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQ--SMT--------------------- 282 (315)
Q Consensus 228 wd~~~~~~~~~~~-~-~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~--~~~--------------------- 282 (315)
||.++++.+..+. + |...|.+++|+|++++|++++.|++|++||++.....+ .+.
T Consensus 223 wd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (355)
T 3vu4_A 223 FKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSV 302 (355)
T ss_dssp EETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCC
T ss_pred EECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEecc
Confidence 9999999988887 5 99999999999999999999999999999997543111 110
Q ss_pred ccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 283 NHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 283 ~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
.+......++|+|++++|++++.||.+++|++
T Consensus 303 ~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~ 334 (355)
T 3vu4_A 303 DKHVRGCKIAWISESSLVVVWPHTRMIETFKV 334 (355)
T ss_dssp CTTCCCCEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred CCCCCceEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 11122356899999999999999999999986
No 88
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.6e-37 Score=263.48 Aligned_cols=258 Identities=18% Similarity=0.302 Sum_probs=214.1
Q ss_pred cccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCC-CCCEEEEeeCCCeEEEEECCC
Q 021247 13 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHP-SGIIAASASLDSFVRVFDVDT 91 (315)
Q Consensus 13 h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~-~g~~l~s~~~d~~i~~w~~~~ 91 (315)
|...|++++|+|.......+|++|+.||.|++|+..+.+....+.+|..+|.+++|+| ++.++++++.|+.|++||+.+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 6788999999998653345899999999999999998888888889999999999999 899999999999999999999
Q ss_pred CceeEEe---eCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCC----CC-CC----------CCCCc
Q 021247 92 NASIATL---EASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIP----RP-EG----------LKPTD 153 (315)
Q Consensus 92 ~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~----~~-~~----------~~~~~ 153 (315)
++.+..+ ..+...|.+++|+|+++.+ ++++.|+.|++||+++.+....+... .. .. .....
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKI-MSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFST 226 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEE-EEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEE
T ss_pred CeEEEEecccccccCceeEEEECCCCCEE-EEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccc
Confidence 9888887 6788999999999998865 67788999999999876654332210 00 00 00001
Q ss_pred cCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccce--------------eeeeecCCccceEEEEEcCCC-CcEEEE
Q 021247 154 KSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK--------------FLHHLEGHFMPVRSLVYSPVD-PRVLFS 218 (315)
Q Consensus 154 ~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~--------------~~~~~~~~~~~v~~~~~~~~~-~~~l~s 218 (315)
...+...|.+++|+ +++|++++.|+.|++||+.+.+ .+..+..|...|.+++|+|+. +++|++
T Consensus 227 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~ 304 (366)
T 3k26_A 227 RDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLAL 304 (366)
T ss_dssp CSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEE
T ss_pred ccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEE
Confidence 12366779999998 7799999999999999997663 366778898999999999841 789999
Q ss_pred EeCCCeEEEEeCCCCe----eEEEeecc--cccEEEEEEcCCCCeEEEEeCCCcEEEEecC
Q 021247 219 ASDDTHVHMYDAEGKS----LVTAMSGH--ASWVLSVDASPDGAAITTGSSDRTVKLWDLN 273 (315)
Q Consensus 219 ~~~d~~i~~wd~~~~~----~~~~~~~~--~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~ 273 (315)
++.|+.|++||++.++ ....+..| ...|.+++|+|++++|++++.||.|++||+.
T Consensus 305 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 305 GNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp ECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 9999999999998764 44466777 7899999999999999999999999999985
No 89
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.7e-37 Score=265.35 Aligned_cols=253 Identities=15% Similarity=0.160 Sum_probs=216.3
Q ss_pred hhhccccceEEEEEeec----CCCCCcEEEEeeCCCcEEEEcCCCCcc-----eeecccc-----ccceEEEEeC----C
Q 021247 9 VENAHEESVWAVTWVPA----TETRPALLLTGSLDETVKLWRPDDMQL-----ERTNTGH-----CLGVVSVAAH----P 70 (315)
Q Consensus 9 ~~~~h~~~v~~v~~~~~----~~~~~~~l~sgs~d~~v~~w~~~~~~~-----~~~~~~h-----~~~v~~~~~~----~ 70 (315)
...+|...|++++|+|. +. ...+|++|+.||.|++|+..+.+. ...+.+| ...|.++.|+ |
T Consensus 57 ~~~~h~~~v~~~~~~~~~~~~g~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 135 (397)
T 1sq9_A 57 SHFVHKSGLHHVDVLQAIERDAF-ELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR 135 (397)
T ss_dssp EEECCTTCEEEEEEEEEEETTTE-EEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC--
T ss_pred EEecCCCcEEEEEEecccccCCc-cccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCC
Confidence 34689999999999997 40 002799999999999999887775 6777778 5899999999 9
Q ss_pred CCCE-EEEeeCCCeEEEEECCC------CceeE-----Ee-------eCCcccEEEEEECCCCCeEEEEecCCCeEEEEe
Q 021247 71 SGII-AASASLDSFVRVFDVDT------NASIA-----TL-------EASPSEVWQMQFDPKGTTLAVAGGGSASVKLWD 131 (315)
Q Consensus 71 ~g~~-l~s~~~d~~i~~w~~~~------~~~~~-----~~-------~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d 131 (315)
++.+ +++++.|+.|++||+.+ +..+. .+ ..+...+.+++|+|++ ++++++.|+.|++||
T Consensus 136 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d 213 (397)
T 1sq9_A 136 LLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISE 213 (397)
T ss_dssp --CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEE
T ss_pred CCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEE
Confidence 9999 99999999999999988 55554 55 3477889999999998 567888999999999
Q ss_pred cCCcceeeeecCCCCCCCCCCccCCC---CcceEEEEECCCCCEEEEecCC---CcEEEEEcccceeeeeecC-------
Q 021247 132 TATWNLIATLSIPRPEGLKPTDKSSS---KKFVLSVAWSPDGRRIACGSMD---GTISVFDVTRAKFLHHLEG------- 198 (315)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~s~d---g~i~i~d~~~~~~~~~~~~------- 198 (315)
+++.+.+..+... ..| ...|.+++|+|++++|++++.| +.|++||+++++.+..+..
T Consensus 214 ~~~~~~~~~~~~~----------~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~ 283 (397)
T 1sq9_A 214 LSTLRPLYNFESQ----------HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQA 283 (397)
T ss_dssp TTTTEEEEEEECC----------C---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC------
T ss_pred CCCCceeEEEecc----------ccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccc
Confidence 9988877766430 012 4459999999999999999999 9999999999999988888
Q ss_pred ------CccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEee------cc---------------cccEEEEEE
Q 021247 199 ------HFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS------GH---------------ASWVLSVDA 251 (315)
Q Consensus 199 ------~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~------~~---------------~~~i~~~~~ 251 (315)
|...|.++.|+| ++++|++++.|+.|++||++.++.+..+. +| ...|.+++|
T Consensus 284 ~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~ 362 (397)
T 1sq9_A 284 SLGEFAHSSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKF 362 (397)
T ss_dssp --CCBSBSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEE
T ss_pred cccccccCCcEEEEEECC-CCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEe
Confidence 999999999998 67799999999999999999999998888 78 899999999
Q ss_pred cCCC----------CeEEEEeCCCcEEEEecCcc
Q 021247 252 SPDG----------AAITTGSSDRTVKLWDLNMR 275 (315)
Q Consensus 252 ~~~~----------~~l~s~~~d~~i~iwd~~~~ 275 (315)
+|++ ++|++++.||.|++|+++++
T Consensus 363 ~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 363 LKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp ECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred ccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 9998 79999999999999999765
No 90
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.8e-36 Score=278.39 Aligned_cols=245 Identities=26% Similarity=0.351 Sum_probs=210.7
Q ss_pred eeccccccceEEEEeCCCC-CEEEEeeCCCeEEEEECCCC-----ceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeE
Q 021247 54 RTNTGHCLGVVSVAAHPSG-IIAASASLDSFVRVFDVDTN-----ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127 (315)
Q Consensus 54 ~~~~~h~~~v~~~~~~~~g-~~l~s~~~d~~i~~w~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i 127 (315)
..+.+|...|++++++|++ .+|++|+.|++|++|++.+. .....+..|...|.+++|+|+++. +++|+.|++|
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~-l~sgs~Dg~v 454 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQF-ALSGSWDGEL 454 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSE-EEEEETTSEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCE-EEEEeCCCcE
Confidence 3467899999999999875 79999999999999999764 345678889999999999999885 4688999999
Q ss_pred EEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeee---ecCCccceE
Q 021247 128 KLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHH---LEGHFMPVR 204 (315)
Q Consensus 128 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~---~~~~~~~v~ 204 (315)
++||+.+++....+. .|...|.+++|+|++++|++|+.|+.|++||+........ ..+|...|.
T Consensus 455 ~vwd~~~~~~~~~~~-------------~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~ 521 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFV-------------GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVS 521 (694)
T ss_dssp EEEETTTTEEEEEEE-------------CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEE
T ss_pred EEEECCCCcceeEEe-------------CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEE
Confidence 999999887766553 3455699999999999999999999999999865543332 246888999
Q ss_pred EEEEcCCC-CcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccc
Q 021247 205 SLVYSPVD-PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN 283 (315)
Q Consensus 205 ~~~~~~~~-~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 283 (315)
++.|+|.. ...+++++.|+.|++||++..++...+.+|.+.|.+++|+|++++|++|+.|++|++||+.+++.+..+..
T Consensus 522 ~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~ 601 (694)
T 3dm0_A 522 CVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA 601 (694)
T ss_dssp EEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC
T ss_pred EEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC
Confidence 99999954 35899999999999999999999999999999999999999999999999999999999999888877654
Q ss_pred cccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 284 HTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 284 ~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
...+.+++|+|++.+|+++ .|+.|+|||+
T Consensus 602 -~~~v~~~~~sp~~~~l~~~-~~~~i~iwd~ 630 (694)
T 3dm0_A 602 -NSVIHALCFSPNRYWLCAA-TEHGIKIWDL 630 (694)
T ss_dssp -SSCEEEEEECSSSSEEEEE-ETTEEEEEET
T ss_pred -CCcEEEEEEcCCCcEEEEE-cCCCEEEEEC
Confidence 4689999999998766665 4567999996
No 91
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.8e-37 Score=268.46 Aligned_cols=256 Identities=14% Similarity=0.225 Sum_probs=204.7
Q ss_pred ccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCc-----------eeEEeeCCc------------ccEEEEEECCCC
Q 021247 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA-----------SIATLEASP------------SEVWQMQFDPKG 114 (315)
Q Consensus 58 ~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~ 114 (315)
.|...|.+++|+|+|.+|++|+.||.|++|++.++. ....+..|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 467899999999999999999999999999999876 466778887 789999999997
Q ss_pred C-eEEEEecCCCeEEEEecCCcceeeee-cCCCCCC----------CCC----------------CccCCCCcceEEEEE
Q 021247 115 T-TLAVAGGGSASVKLWDTATWNLIATL-SIPRPEG----------LKP----------------TDKSSSKKFVLSVAW 166 (315)
Q Consensus 115 ~-~~~~~~~~d~~i~~~d~~~~~~~~~~-~~~~~~~----------~~~----------------~~~~~~~~~i~~~~~ 166 (315)
+ ..+++++.|++|++||+...+..... ......+ ... .....|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 3 34567789999999999765432110 0000000 000 002356778999999
Q ss_pred CCCCCEEEEecCCCcEEEEEccc-ceeee-------eecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCee---
Q 021247 167 SPDGRRIACGSMDGTISVFDVTR-AKFLH-------HLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSL--- 235 (315)
Q Consensus 167 ~~~~~~l~~~s~dg~i~i~d~~~-~~~~~-------~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--- 235 (315)
+|++++|++| .|+.|++||+++ ++... .+.+|...|.+++|+|.++.+|++++.|+.|++||++.+..
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999999 799999999984 44443 35689999999999996558999999999999999998776
Q ss_pred -EEEeecccc------------cEEEEEEcCCCCeEEEEeCCCcEEEEecCc-cceehcccccccc--------------
Q 021247 236 -VTAMSGHAS------------WVLSVDASPDGAAITTGSSDRTVKLWDLNM-RAAMQSMTNHTDQ-------------- 287 (315)
Q Consensus 236 -~~~~~~~~~------------~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~-------------- 287 (315)
+..+..|.. .|.+++|+|++++|++++. +.|++||++. ++.+..+..|...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 677777765 8999999999999999999 9999999997 7888888877532
Q ss_pred -eEEEEEeeCCCEEEEEeCCCcEEEeecC
Q 021247 288 -VWGVSFRPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 288 -v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
+..++|+|++.+|++++.||.|+|||+.
T Consensus 344 ~~~~~~~s~~~~~l~s~s~dg~v~iwd~~ 372 (447)
T 3dw8_B 344 DKFECCWNGSDSVVMTGSYNNFFRMFDRN 372 (447)
T ss_dssp CCCCEEECTTSSEEEEECSTTEEEEEETT
T ss_pred cceEEEECCCCCEEEEeccCCEEEEEEcC
Confidence 3349999999999999999999999963
No 92
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=4.6e-37 Score=266.99 Aligned_cols=293 Identities=18% Similarity=0.292 Sum_probs=234.2
Q ss_pred ceEEEEEeecCCC------CCcEEEEeeCC----CcEEEEcCC--------------------------CCcc-eeeccc
Q 021247 16 SVWAVTWVPATET------RPALLLTGSLD----ETVKLWRPD--------------------------DMQL-ERTNTG 58 (315)
Q Consensus 16 ~v~~v~~~~~~~~------~~~~l~sgs~d----~~v~~w~~~--------------------------~~~~-~~~~~~ 58 (315)
+..++.|.|.... ....++.|... +.|.+.+.. +.++ .....+
T Consensus 47 p~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 126 (430)
T 2xyi_A 47 PSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKIN 126 (430)
T ss_dssp CCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEEEE
T ss_pred CceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEEEc
Confidence 6788999986421 11457777642 456666421 1112 123457
Q ss_pred cccceEEEEeCCC-CCEEEEeeCCCeEEEEECCC----------CceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeE
Q 021247 59 HCLGVVSVAAHPS-GIIAASASLDSFVRVFDVDT----------NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASV 127 (315)
Q Consensus 59 h~~~v~~~~~~~~-g~~l~s~~~d~~i~~w~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i 127 (315)
|...|++++++|+ +.++++++.||.|++|++.+ ......+..|...+.+++|+|++..++++|+.|+.|
T Consensus 127 h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 206 (430)
T 2xyi_A 127 HEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTI 206 (430)
T ss_dssp ESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCE
T ss_pred CCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeE
Confidence 8899999999997 68999999999999999986 566778888999999999999988567889999999
Q ss_pred EEEecCCcceee-eecCCCCCCCCCCccCCCCcceEEEEECC-CCCEEEEecCCCcEEEEEcccc---eeeeeecCCccc
Q 021247 128 KLWDTATWNLIA-TLSIPRPEGLKPTDKSSSKKFVLSVAWSP-DGRRIACGSMDGTISVFDVTRA---KFLHHLEGHFMP 202 (315)
Q Consensus 128 ~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~s~dg~i~i~d~~~~---~~~~~~~~~~~~ 202 (315)
++||+....... .+.. ......|...|.+++|+| ++..|++++.|+.|++||++++ +....+..|...
T Consensus 207 ~vwd~~~~~~~~~~~~~-------~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 279 (430)
T 2xyi_A 207 CLWDINATPKEHRVIDA-------KNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE 279 (430)
T ss_dssp EEEETTSCCBGGGEEEC-------SEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC
T ss_pred EEEeCCCCCCCCceecc-------ceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC
Confidence 999998632210 0000 001124556799999999 6788999999999999999876 466777789999
Q ss_pred eEEEEEcCCCCcEEEEEeCCCeEEEEeCCC-CeeEEEeecccccEEEEEEcCCCC-eEEEEeCCCcEEEEecCc------
Q 021247 203 VRSLVYSPVDPRVLFSASDDTHVHMYDAEG-KSLVTAMSGHASWVLSVDASPDGA-AITTGSSDRTVKLWDLNM------ 274 (315)
Q Consensus 203 v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~~~d~~i~iwd~~~------ 274 (315)
|++++|+|.+..++++|+.|+.|++||++. ...+..+..|...|.+++|+|+++ +|++++.|+.|++||+..
T Consensus 280 v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 359 (430)
T 2xyi_A 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 359 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCC
T ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccC
Confidence 999999997777899999999999999987 566778888999999999999985 699999999999999986
Q ss_pred --------cceehcccccccceEEEEEeeCCC-EEEEEeCCCcEEEeecC
Q 021247 275 --------RAAMQSMTNHTDQVWGVSFRPLGG-RVVSVSDDKSISLYEYS 315 (315)
Q Consensus 275 --------~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~d~~i~i~~~~ 315 (315)
...+..+.+|...|++++|+|++. +|++++.|+.|+||++.
T Consensus 360 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 360 TEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp HHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred ccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 244556678889999999999999 89999999999999974
No 93
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5e-37 Score=259.69 Aligned_cols=250 Identities=18% Similarity=0.273 Sum_probs=207.4
Q ss_pred hccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCc-ceeeccccccceEEEE------eCCCCCEEEEeeCCCe
Q 021247 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQ-LERTNTGHCLGVVSVA------AHPSGIIAASASLDSF 83 (315)
Q Consensus 11 ~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~-~~~~~~~h~~~v~~~~------~~~~g~~l~s~~~d~~ 83 (315)
.+|...|++++|+|... ...+|++|+.||.|++|+..+.+ ....+.+|...|.++. ++|++.++++++.|+.
T Consensus 62 ~~~~~~v~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~ 140 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSL-QQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGT 140 (357)
T ss_dssp EEESSCEEEEECTTCCT-TTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSC
T ss_pred ecccCcEEEEEEcCCCC-CCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCe
Confidence 37999999999999731 02379999999999999998877 7777889999999994 5789999999999999
Q ss_pred EEEEECCCCc-eeEEeeCCcc----cEEEEE----ECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCcc
Q 021247 84 VRVFDVDTNA-SIATLEASPS----EVWQMQ----FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDK 154 (315)
Q Consensus 84 i~~w~~~~~~-~~~~~~~~~~----~v~~~~----~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 154 (315)
|++||+.++. .+..+..+.. .+++++ |+|+++.+ ++++.|+.|++||+++.+......
T Consensus 141 i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~------------ 207 (357)
T 3i2n_A 141 VKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVV-CAGYDNGDIKLFDLRNMALRWETN------------ 207 (357)
T ss_dssp EEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEE-EEEETTSEEEEEETTTTEEEEEEE------------
T ss_pred EEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEE-EEEccCCeEEEEECccCceeeecC------------
Confidence 9999999887 6677755444 788888 67887754 677889999999999877644322
Q ss_pred CCCCcceEEEEECC---CCCEEEEecCCCcEEEEEcccceeeeeec-----CCccceEEEEEcCCCCcEEEEEeCCCeEE
Q 021247 155 SSSKKFVLSVAWSP---DGRRIACGSMDGTISVFDVTRAKFLHHLE-----GHFMPVRSLVYSPVDPRVLFSASDDTHVH 226 (315)
Q Consensus 155 ~~~~~~i~~~~~~~---~~~~l~~~s~dg~i~i~d~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~s~~~d~~i~ 226 (315)
+...|.+++|+| ++++|++++.||.|++||+++++....+. +|...|.+++|+|.+..++++++.|+.|+
T Consensus 208 --~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 285 (357)
T 3i2n_A 208 --IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLH 285 (357)
T ss_dssp --CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred --CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEE
Confidence 234599999999 89999999999999999998877655444 89999999999995545899999999999
Q ss_pred EEeCCCC-------------------eeEEEeecccccEEEEEEcCCCCeEE-EEeCCCcEEEEecCccc
Q 021247 227 MYDAEGK-------------------SLVTAMSGHASWVLSVDASPDGAAIT-TGSSDRTVKLWDLNMRA 276 (315)
Q Consensus 227 ~wd~~~~-------------------~~~~~~~~~~~~i~~~~~~~~~~~l~-s~~~d~~i~iwd~~~~~ 276 (315)
+||++.. +.+..+.+|...|.+++|+|++++|+ +++.|+.|++||+....
T Consensus 286 iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 286 LWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred EeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 9998643 35667788999999999999999998 89999999999998654
No 94
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-36 Score=260.82 Aligned_cols=257 Identities=20% Similarity=0.318 Sum_probs=208.2
Q ss_pred cEEEEcCCCCcceeeccccccceEEEEeCCCCC-EEEEeeCCCeEEEEEC----CCCc------eeEEeeC---------
Q 021247 41 TVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGI-IAASASLDSFVRVFDV----DTNA------SIATLEA--------- 100 (315)
Q Consensus 41 ~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~-~l~s~~~d~~i~~w~~----~~~~------~~~~~~~--------- 100 (315)
.+.+|+.+..........|..+|.+++|+|+|. +|++++.|+.|++|++ .+++ ....+..
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (425)
T 1r5m_A 26 IDSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSG 105 (425)
T ss_dssp --------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC----
T ss_pred ccccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccccccccccc
Confidence 345677654443333445668999999999999 9999999999999999 8877 4444544
Q ss_pred -CcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCC
Q 021247 101 -SPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMD 179 (315)
Q Consensus 101 -~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~d 179 (315)
|...|.+++|+|+++.+ ++++.|+.|++|| .+++.+..+. .|...|.+++|+|++++|++++.|
T Consensus 106 ~~~~~v~~~~~s~~~~~l-~~~~~dg~i~i~~-~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~l~~~~~d 170 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSI-VTGVENGELRLWN-KTGALLNVLN-------------FHRAPIVSVKWNKDGTHIISMDVE 170 (425)
T ss_dssp --CBCEEEEEECTTSSEE-EEEETTSCEEEEE-TTSCEEEEEC-------------CCCSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCceEEEEEcCCCCEE-EEEeCCCeEEEEe-CCCCeeeecc-------------CCCccEEEEEECCCCCEEEEEecC
Confidence 56799999999998865 5778899999999 4455555442 244568999999999999999999
Q ss_pred CcEEEEEcccceeee--------------------------------------------------------eecCCccce
Q 021247 180 GTISVFDVTRAKFLH--------------------------------------------------------HLEGHFMPV 203 (315)
Q Consensus 180 g~i~i~d~~~~~~~~--------------------------------------------------------~~~~~~~~v 203 (315)
+.|++||+.+++.+. .+..|..+|
T Consensus 171 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i 250 (425)
T 1r5m_A 171 NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPI 250 (425)
T ss_dssp CCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCE
T ss_pred CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCce
Confidence 999999987665432 234577789
Q ss_pred EEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccc
Q 021247 204 RSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN 283 (315)
Q Consensus 204 ~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 283 (315)
.+++|+| ++++|++++.|+.|++||++.++.+..+..|...|.+++|+|++ .+++++.|+.|++||++.++.+..+..
T Consensus 251 ~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~ 328 (425)
T 1r5m_A 251 SVLEFND-TNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIV 328 (425)
T ss_dssp EEEEEET-TTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred EEEEECC-CCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEeccc
Confidence 9999998 56799999999999999999988888888999999999999999 999999999999999999998888888
Q ss_pred cccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 284 HTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 284 ~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
|...+.+++|+|++++|++++.||.|+||++
T Consensus 329 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~ 359 (425)
T 1r5m_A 329 DGVPIFAGRISQDGQKYAVAFMDGQVNVYDL 359 (425)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred CCccEEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence 9999999999999999999999999999996
No 95
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2.2e-35 Score=253.05 Aligned_cols=265 Identities=18% Similarity=0.251 Sum_probs=225.6
Q ss_pred cEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEE-EEeeCCCeEEEEECCCCceeEEeeCCcccEEEEE
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIA-ASASLDSFVRVFDVDTNASIATLEASPSEVWQMQ 109 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l-~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~ 109 (315)
-++++++.|+.|++||..+.++...+..|. .+.+++++|+|.++ ++++.|+.|++||+.+++.+..+..+. .+..++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~ 80 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA 80 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceE
Confidence 368999999999999999888877777664 48999999999876 677799999999999999888877655 899999
Q ss_pred ECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEE-EEecCCCcEEEEEcc
Q 021247 110 FDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI-ACGSMDGTISVFDVT 188 (315)
Q Consensus 110 ~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~s~dg~i~i~d~~ 188 (315)
|+|+++.+++++..++.|++||+.+++.+..+... ..+.+++|+|+++.+ ++++.++.|++||+.
T Consensus 81 ~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~--------------~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 146 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG--------------KSPLGLALSPDGKKLYVTNNGDKTVSVINTV 146 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS--------------SSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred ECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC--------------CCcceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 99999988888888899999999988777665421 237899999999977 688889999999999
Q ss_pred cceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEe---CCC
Q 021247 189 RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGS---SDR 265 (315)
Q Consensus 189 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~---~d~ 265 (315)
+++....+..+. .+..+.|+|++..++++++.++.|++||+++++.+..+. +...+.+++|+|++++|++++ .++
T Consensus 147 ~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~ 224 (391)
T 1l0q_A 147 TKAVINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFN 224 (391)
T ss_dssp TTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCC
T ss_pred CCcEEEEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCC
Confidence 998888777664 568999999655555788899999999999988776665 456789999999999988888 789
Q ss_pred cEEEEecCccceehcccccccceEEEEEeeCCCEE-EEEeCCCcEEEeec
Q 021247 266 TVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRV-VSVSDDKSISLYEY 314 (315)
Q Consensus 266 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~d~~i~i~~~ 314 (315)
.|++||++.++.+..+..|. .+.+++|+|+|++| ++++.|++|++||+
T Consensus 225 ~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 225 TVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDT 273 (391)
T ss_dssp EEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred cEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEEC
Confidence 99999999988887777664 57899999999988 67788999999996
No 96
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-36 Score=252.80 Aligned_cols=244 Identities=20% Similarity=0.268 Sum_probs=216.5
Q ss_pred eeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecC
Q 021247 54 RTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTA 133 (315)
Q Consensus 54 ~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~ 133 (315)
..+.+|..+|.+++|+|+|.+|++++.|+.|++||+.+++.+..+..|...|.+++|+|+++.+ ++++.|+.|++||+.
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYC-VTGSADYSIKLWDVS 104 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE-EEEETTTEEEEEETT
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECC
Confidence 3467899999999999999999999999999999999999999999999999999999998865 677889999999999
Q ss_pred CcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCC-----CcEEEEEcccce-----------eeeeec
Q 021247 134 TWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMD-----GTISVFDVTRAK-----------FLHHLE 197 (315)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~d-----g~i~i~d~~~~~-----------~~~~~~ 197 (315)
+++.+..+.. ...+.+++|+|++++|++++.+ +.|++||+.... ....+.
T Consensus 105 ~~~~~~~~~~--------------~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 170 (369)
T 3zwl_B 105 NGQCVATWKS--------------PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKII 170 (369)
T ss_dssp TCCEEEEEEC--------------SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEE
T ss_pred CCcEEEEeec--------------CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeecc
Confidence 8887776642 2348999999999999999998 999999987553 233444
Q ss_pred CCcc--ceEEEEEcCCCCcEEEEEeCCCeEEEEeCCC-CeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCc
Q 021247 198 GHFM--PVRSLVYSPVDPRVLFSASDDTHVHMYDAEG-KSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274 (315)
Q Consensus 198 ~~~~--~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 274 (315)
.|.. .+.+++|+| +++++++++.|+.|++||++. ...+..+..|...|.+++|+|++++|++++.|+.|++||+++
T Consensus 171 ~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 249 (369)
T 3zwl_B 171 THEGLDAATVAGWST-KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST 249 (369)
T ss_dssp CCTTCCCEEEEEECG-GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCcCccceeEEEEcC-CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCC
Confidence 5555 899999998 677999999999999999998 788888899999999999999999999999999999999999
Q ss_pred cceehcccccccceEEEEEeeCCCEEEEEeCCC--------------cEEEeec
Q 021247 275 RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDK--------------SISLYEY 314 (315)
Q Consensus 275 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~--------------~i~i~~~ 314 (315)
++.+..+. +...+.+++|+|++.++++++.++ .+++||.
T Consensus 250 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 302 (369)
T 3zwl_B 250 LQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHK 302 (369)
T ss_dssp CCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEET
T ss_pred Cceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEec
Confidence 88887775 678899999999999999999998 7899885
No 97
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-36 Score=262.19 Aligned_cols=282 Identities=13% Similarity=0.082 Sum_probs=224.7
Q ss_pred ccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCc---ceeecc---------------------------------
Q 021247 14 EESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQ---LERTNT--------------------------------- 57 (315)
Q Consensus 14 ~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~---~~~~~~--------------------------------- 57 (315)
..++.+++|+|++. +|+ ++.++.|++|+..+++ ......
T Consensus 4 ~~p~~~v~~s~dg~----~l~-~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (450)
T 2vdu_B 4 IHPLQNLLTSRDGS----LVF-AIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKS 78 (450)
T ss_dssp ECCCCEEEECSSSS----EEE-EEETTEEEEEEEETTTEEEEEEEEECCC------------------------------
T ss_pred cccEEEEEecCCCC----EEE-EEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhcccccccccccccccc
Confidence 35889999999875 444 4568899999987766 322221
Q ss_pred ---------------------ccccceEEEEeCCCCCEE-EEeeCCCeEEEEECC--CCceeEEee--CCcccEEEEEEC
Q 021247 58 ---------------------GHCLGVVSVAAHPSGIIA-ASASLDSFVRVFDVD--TNASIATLE--ASPSEVWQMQFD 111 (315)
Q Consensus 58 ---------------------~h~~~v~~~~~~~~g~~l-~s~~~d~~i~~w~~~--~~~~~~~~~--~~~~~v~~~~~~ 111 (315)
+|...|.+++|+|+|.+| ++++.|+.|++||+. ++..+..+. .+...|.+++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s 158 (450)
T 2vdu_B 79 NKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIA 158 (450)
T ss_dssp ---------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEEC
T ss_pred CcCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEc
Confidence 344479999999999986 899999999999999 777777765 456889999999
Q ss_pred CCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCC---CCEEEEecCCCcEEEEEcc
Q 021247 112 PKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD---GRRIACGSMDGTISVFDVT 188 (315)
Q Consensus 112 ~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~s~dg~i~i~d~~ 188 (315)
|+++.+ ++++.++.+++|++.+.+.... .......|...|.+++|+|+ +++|++++.|+.|++||+.
T Consensus 159 p~~~~l-~~~~~~g~v~~~~~~~~~~~~~---------~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 159 EDDTTV-IIADKFGDVYSIDINSIPEEKF---------TQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP 228 (450)
T ss_dssp TTSSEE-EEEETTSEEEEEETTSCCCSSC---------CCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEES
T ss_pred CCCCEE-EEEeCCCcEEEEecCCcccccc---------cceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC
Confidence 998865 5677899999999976543210 00012245567999999999 9999999999999999999
Q ss_pred cceeeee-ecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeec-------------------------c
Q 021247 189 RAKFLHH-LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSG-------------------------H 242 (315)
Q Consensus 189 ~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~-------------------------~ 242 (315)
+++.+.. +.+|...|.+++|+ ++++|++++.|+.|++||+++++.+..+.. .
T Consensus 229 ~~~~~~~~~~~h~~~v~~~~~s--d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (450)
T 2vdu_B 229 QCFIVDKWLFGHKHFVSSICCG--KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDII 306 (450)
T ss_dssp CTTCEEEECCCCSSCEEEEEEC--STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CB
T ss_pred CCceeeeeecCCCCceEEEEEC--CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccc
Confidence 8887776 56899999999999 778999999999999999999887776652 2
Q ss_pred cccEEEEEEcCCCCeEEEEe-CCCcEEEEec--Ccc---ceehcccccccceEEEEEeeCCCEEEEEeC-------CCcE
Q 021247 243 ASWVLSVDASPDGAAITTGS-SDRTVKLWDL--NMR---AAMQSMTNHTDQVWGVSFRPLGGRVVSVSD-------DKSI 309 (315)
Q Consensus 243 ~~~i~~~~~~~~~~~l~s~~-~d~~i~iwd~--~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-------d~~i 309 (315)
...|.+++++|++++|++++ .|+.|++|++ ..+ ..+..+..| ..+++++|+|++ .+++.+. +..|
T Consensus 307 ~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i 384 (450)
T 2vdu_B 307 EFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDE-FQVTLDNKESSGVQKNFA 384 (450)
T ss_dssp CCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTE-EEEEECCTTCCSSCCCSE
T ss_pred eEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCc-EEEEEecccCCCCCCcce
Confidence 35689999999999999998 8999999999 554 556667777 789999999954 5555433 5568
Q ss_pred EEeec
Q 021247 310 SLYEY 314 (315)
Q Consensus 310 ~i~~~ 314 (315)
+||.+
T Consensus 385 ~v~~~ 389 (450)
T 2vdu_B 385 KFIEY 389 (450)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99875
No 98
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-37 Score=268.76 Aligned_cols=266 Identities=13% Similarity=0.171 Sum_probs=211.2
Q ss_pred EEcCCCCcceeec-cccccceEEEEeCC-CCCEEEEeeCCCeEEEEECCC---Cc---eeEEeeCCcccEEEEEECCCCC
Q 021247 44 LWRPDDMQLERTN-TGHCLGVVSVAAHP-SGIIAASASLDSFVRVFDVDT---NA---SIATLEASPSEVWQMQFDPKGT 115 (315)
Q Consensus 44 ~w~~~~~~~~~~~-~~h~~~v~~~~~~~-~g~~l~s~~~d~~i~~w~~~~---~~---~~~~~~~~~~~v~~~~~~~~~~ 115 (315)
.|++. +++...+ .+|..+|.+++|+| ++.+|++|+.|++|++||+.+ +. ....+ .|..+|.+++|+|+++
T Consensus 47 ~w~~~-g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~ 124 (437)
T 3gre_A 47 MGNLR-GKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFD 124 (437)
T ss_dssp GGGCC-CCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSS
T ss_pred ccccc-ceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCC
Confidence 48854 4555666 88999999999999 999999999999999999876 33 23333 3788999999999887
Q ss_pred eEEEEecCCCeEEEEecC---CcceeeeecCCCCCCCCCCccCCCCcceEEEE--ECCCCCEEEEecCCCcEEEEEcccc
Q 021247 116 TLAVAGGGSASVKLWDTA---TWNLIATLSIPRPEGLKPTDKSSSKKFVLSVA--WSPDGRRIACGSMDGTISVFDVTRA 190 (315)
Q Consensus 116 ~~~~~~~~d~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~l~~~s~dg~i~i~d~~~~ 190 (315)
.+ ++++.|++|++||+. .++.............. .....+...+.++. +++++++|++++.|+.|++||++++
T Consensus 125 ~l-~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 202 (437)
T 3gre_A 125 AF-AVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKIN-LKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL 202 (437)
T ss_dssp EE-EEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEE-GGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC
T ss_pred EE-EEEeCCCEEEEEEeccccCCceeeccccceeEEEE-ccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Confidence 54 678899999999995 44433322111000000 00000334466776 6688999999999999999999999
Q ss_pred eeeeeecC--CccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEee-cccccEEEEEEc----CCCCeEEEEeC
Q 021247 191 KFLHHLEG--HFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS-GHASWVLSVDAS----PDGAAITTGSS 263 (315)
Q Consensus 191 ~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-~~~~~i~~~~~~----~~~~~l~s~~~ 263 (315)
+.+..+.. |...|.+++|+| ++.+|++++.|+.|++||++.++.+..+. .|...|.+++++ |++.+|++|+.
T Consensus 203 ~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~ 281 (437)
T 3gre_A 203 ERLQIIENSPRHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSS 281 (437)
T ss_dssp CEEEEEECCGGGCCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEEST
T ss_pred eeeEEEccCCCCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcC
Confidence 99988887 889999999998 57899999999999999999998888776 788899999665 46779999999
Q ss_pred CCcEEEEecCccceehcccc--------------------------cccceEEEEEeeCCCEEEEEeCCCcEEEeecC
Q 021247 264 DRTVKLWDLNMRAAMQSMTN--------------------------HTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 264 d~~i~iwd~~~~~~~~~~~~--------------------------~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
|+.|++||+++++.+..+.+ |...|++++|+ ++++|++++.|++|++||+.
T Consensus 282 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~ 358 (437)
T 3gre_A 282 KTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLN 358 (437)
T ss_dssp TEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETT
T ss_pred CCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECC
Confidence 99999999998776554432 56678899999 77899999999999999963
No 99
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-36 Score=247.68 Aligned_cols=245 Identities=20% Similarity=0.272 Sum_probs=212.8
Q ss_pred CcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEE
Q 021247 50 MQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129 (315)
Q Consensus 50 ~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~ 129 (315)
.++.+.+.+|..+|.++++ +++.++++++.||.|++||+.++.....+..+...|.+++|+|+++.+ ++++.|+.+++
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~~ 85 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELL-LFGGKDTMING 85 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEE-EEEETTSCEEE
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEE-EEecCCCeEEE
Confidence 3566778899999999999 999999999999999999999988888888899999999999998855 67789999999
Q ss_pred EecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEc
Q 021247 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS 209 (315)
Q Consensus 130 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 209 (315)
|++....... .......+...|.+++| ++++|++++.|+.|++|| .++....+..|..++.++.|.
T Consensus 86 ~~~~~~~~~~----------~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~ 151 (313)
T 3odt_A 86 VPLFATSGED----------PLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVV 151 (313)
T ss_dssp EETTCCTTSC----------C-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEE
T ss_pred EEeeecCCCC----------cccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEc
Confidence 9986532110 01112345567899999 577999999999999999 667778888999999999999
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCCCeeEEEeec-ccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccce
Q 021247 210 PVDPRVLFSASDDTHVHMYDAEGKSLVTAMSG-HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQV 288 (315)
Q Consensus 210 ~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v 288 (315)
|.++.++++++.|+.|++|| ..+....+.. |...+.+++++|++. +++++.|+.|++||++.++.+..+..|...|
T Consensus 152 ~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i 228 (313)
T 3odt_A 152 SFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFV 228 (313)
T ss_dssp ETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred cCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceE
Confidence 87788999999999999999 3445556665 899999999999988 9999999999999999999999999999999
Q ss_pred EEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 289 WGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 289 ~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
++++|+|++ +|++++.||.|++||+
T Consensus 229 ~~~~~~~~~-~l~~~~~dg~v~iwd~ 253 (313)
T 3odt_A 229 YCIKLLPNG-DIVSCGEDRTVRIWSK 253 (313)
T ss_dssp EEEEECTTS-CEEEEETTSEEEEECT
T ss_pred EEEEEecCC-CEEEEecCCEEEEEEC
Confidence 999999999 6999999999999996
No 100
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=9.4e-37 Score=265.05 Aligned_cols=250 Identities=20% Similarity=0.291 Sum_probs=212.8
Q ss_pred hhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCC----------CcceeeccccccceEEEEeCCCCC-EEEEe
Q 021247 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD----------MQLERTNTGHCLGVVSVAAHPSGI-IAASA 78 (315)
Q Consensus 10 ~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~----------~~~~~~~~~h~~~v~~~~~~~~g~-~l~s~ 78 (315)
...|.+.|++++|+|.. ..+|++|+.||.|++|+... .+....+.+|...+.+++|+|++. +|+++
T Consensus 124 ~~~h~~~v~~l~~~p~~---~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQN---ACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEESSCCSEEEEETTE---EEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEcCCCcEEEEEECCCC---CcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 35899999999999953 23899999999999999865 455566788999999999999998 99999
Q ss_pred eCCCeEEEEECCCCce-------eEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcc---eeeeecCCCCCC
Q 021247 79 SLDSFVRVFDVDTNAS-------IATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWN---LIATLSIPRPEG 148 (315)
Q Consensus 79 ~~d~~i~~w~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~---~~~~~~~~~~~~ 148 (315)
+.||.|++|++..+.. ...+..|...|.+++|+|.+..++++++.|+.|++||+++.+ .+..+
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~------- 273 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV------- 273 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE-------
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe-------
Confidence 9999999999987432 355667888999999999766677889999999999998752 22222
Q ss_pred CCCCccCCCCcceEEEEECCCCC-EEEEecCCCcEEEEEccc-ceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEE
Q 021247 149 LKPTDKSSSKKFVLSVAWSPDGR-RIACGSMDGTISVFDVTR-AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVH 226 (315)
Q Consensus 149 ~~~~~~~~~~~~i~~~~~~~~~~-~l~~~s~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~ 226 (315)
..+...|++++|+|++. .|++|+.||.|++||+++ ...+..+..|...|.++.|+|.+..+|++++.|+.|+
T Consensus 274 ------~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~ 347 (430)
T 2xyi_A 274 ------DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 347 (430)
T ss_dssp ------ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCE
T ss_pred ------ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEE
Confidence 13455699999999887 688999999999999987 5567888889999999999997778899999999999
Q ss_pred EEeCCC--------------CeeEEEeecccccEEEEEEcCCCC-eEEEEeCCCcEEEEecCcc
Q 021247 227 MYDAEG--------------KSLVTAMSGHASWVLSVDASPDGA-AITTGSSDRTVKLWDLNMR 275 (315)
Q Consensus 227 ~wd~~~--------------~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~ 275 (315)
+||+.. ..++....+|...|.+++|+|+++ +|++++.||.|++|++...
T Consensus 348 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 348 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred EEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 999875 256677788999999999999998 8999999999999999754
No 101
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.4e-35 Score=256.97 Aligned_cols=262 Identities=24% Similarity=0.381 Sum_probs=209.7
Q ss_pred hccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECC
Q 021247 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90 (315)
Q Consensus 11 ~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~ 90 (315)
.+|.+.|++|+|+|+++ +|++|+.||+|++|+..+.+..+...+|...+.++++ ++.++++++.|+.+++||..
T Consensus 144 ~~~~~~V~sv~fspdg~----~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~ 217 (420)
T 4gga_A 144 EQPGEYISSVAWIKEGN----YLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVR 217 (420)
T ss_dssp CSTTCCEEEEEECTTSS----EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred cCCCCcEEEEEECCCCC----EEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeec
Confidence 47888999999999775 7999999999999999999999999999999998887 46799999999999999988
Q ss_pred CCc-eeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCC
Q 021247 91 TNA-SIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169 (315)
Q Consensus 91 ~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 169 (315)
... .+..+..|...+..+.++|++..+ ++++.|+.+++||...++.... .......+...|.+++|+|.
T Consensus 218 ~~~~~~~~~~~h~~~~~~~~~~~~g~~l-~s~~~D~~v~i~~~~~~~~~~~---------~~~~~~~~~~~V~~~~~~p~ 287 (420)
T 4gga_A 218 VAEHHVATLSGHSQEVCGLRWAPDGRHL-ASGGNDNLVNVWPSAPGEGGWV---------PLQTFTQHQGAVKAVAWCPW 287 (420)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTSSEE-EEEETTSCEEEEESSCCSSCSC---------CSEEECCCSSCEEEEEECTT
T ss_pred ccceeeEEecccccceeeeeecCCCCee-eeeeccccceEEeeccccccce---------eeeeecccCCceeeeeeCCC
Confidence 754 467788899999999999998865 6788999999999976542211 01112345567999999997
Q ss_pred CC-EEEE--ecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEE-eCCCeEEEEeCCCCeeEEEeeccccc
Q 021247 170 GR-RIAC--GSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSA-SDDTHVHMYDAEGKSLVTAMSGHASW 245 (315)
Q Consensus 170 ~~-~l~~--~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-~~d~~i~~wd~~~~~~~~~~~~~~~~ 245 (315)
+. .+++ |+.|+.|++||+.+++....+..| ..+.++.|+|.+..+++++ +.|+.|++||..+++.+..+.+|.+.
T Consensus 288 ~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~ 366 (420)
T 4gga_A 288 QSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR 366 (420)
T ss_dssp CTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC
T ss_pred cccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCC
Confidence 55 4443 568999999999999988887765 4678889998555444333 37999999999999999999999999
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceE
Q 021247 246 VLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW 289 (315)
Q Consensus 246 i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~ 289 (315)
|++++|+|+|++|+||+.|++|++||+....+.+....+...+.
T Consensus 367 V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~ 410 (420)
T 4gga_A 367 VLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASAA 410 (420)
T ss_dssp EEEEEECTTSSCEEEEETTTEEEEECCSCSSCC-----------
T ss_pred EEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCcc
Confidence 99999999999999999999999999987666655555544433
No 102
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=9.7e-36 Score=256.13 Aligned_cols=297 Identities=16% Similarity=0.226 Sum_probs=209.1
Q ss_pred hccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCC---CCEEEEeeCCCeEEEE
Q 021247 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPS---GIIAASASLDSFVRVF 87 (315)
Q Consensus 11 ~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~---g~~l~s~~~d~~i~~w 87 (315)
.+|...|++++|+|... .+|++++.||.|++|+..+.+....+. +...+.++.+++. +.++++++.|+.|++|
T Consensus 96 ~~~~~~v~~~~~~~~~~---~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 171 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDT---GMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLC 171 (408)
T ss_dssp TCCSSCEEEEEECTTCT---TCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEE
T ss_pred ccCCCcEEEEEEccCCC---cEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEE
Confidence 36999999999999433 279999999999999998877666554 6678899999884 4599999999999999
Q ss_pred ECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcc-eeeeecCCCCCC--CCCCccCCCCcceEEE
Q 021247 88 DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWN-LIATLSIPRPEG--LKPTDKSSSKKFVLSV 164 (315)
Q Consensus 88 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~i~~~ 164 (315)
|+.++..+..+..|...|.+++|+|++..++++++.|+.|++||++..+ .+..+....... ........+...|.++
T Consensus 172 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 172 DLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp ESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred eCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence 9999998999999999999999999999877889999999999998765 233332111110 1111224566789999
Q ss_pred EECCCCCEEEEecCCCcEEEEEcccceeeeeecCCc----cceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEee
Q 021247 165 AWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHF----MPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS 240 (315)
Q Consensus 165 ~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 240 (315)
+|+|++++|++++.|+.|++||+.+++.......+. .....+.+.......++.++.++.|++||..+++.+..+.
T Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 331 (408)
T 4a11_B 252 CFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK 331 (408)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred EEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec
Confidence 999999999999999999999998877654433221 1111222333345567788889999999999999999999
Q ss_pred cccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeC-CCEEEEEeCCCcEEEeec
Q 021247 241 GHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPL-GGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 241 ~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~d~~i~i~~~ 314 (315)
+|...|.+++|+|++++|++++.||.|++||++.++.+.....+.. ...+.|. ...+.+.+.|+.+++|+.
T Consensus 332 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~W~~ 403 (408)
T 4a11_B 332 GHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTT---KSQLNPAFEDAWSSSDEEGGTSAWSH 403 (408)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-----------------------------------------
T ss_pred cCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEe---ccccccccceeecccCccCceeecCC
Confidence 9999999999999999999999999999999998877665443321 2233433 334567888999999975
No 103
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-37 Score=282.72 Aligned_cols=250 Identities=22% Similarity=0.381 Sum_probs=210.0
Q ss_pred eeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECC--CCceeEEeeCCcccEEEEEECCC--CCeEEEEecCCCeEEE
Q 021247 54 RTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD--TNASIATLEASPSEVWQMQFDPK--GTTLAVAGGGSASVKL 129 (315)
Q Consensus 54 ~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~ 129 (315)
..+.+|..+|++++|+|+|.++++++.||+|++||+. +...+..+..|..+|.+++|+|+ ++ ++++++.|++|++
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~-~l~s~s~Dg~I~v 81 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGKVLI 81 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCS-EEEEEETTSCEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCC-EEEEEeCCCeEEE
Confidence 3467899999999999999999999999999999998 44567788889999999999987 55 5578889999999
Q ss_pred EecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCC--CCEEEEecCCCcEEEEEcccce--eeeeecCCccceEE
Q 021247 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD--GRRIACGSMDGTISVFDVTRAK--FLHHLEGHFMPVRS 205 (315)
Q Consensus 130 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~s~dg~i~i~d~~~~~--~~~~~~~~~~~v~~ 205 (315)
||+.+++....... ..|...|.+++|+|+ ++.+++|+.||.|++||++++. ....+.+|...|.+
T Consensus 82 wd~~~~~~~~~~~~-----------~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~ 150 (753)
T 3jro_A 82 WKEENGRWSQIAVH-----------AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNS 150 (753)
T ss_dssp EEEETTEEEEEEEE-----------CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEE
T ss_pred EECCCCcccccccc-----------cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEE
Confidence 99988652222111 234556999999999 9999999999999999998763 34556789999999
Q ss_pred EEEcCC------------CCcEEEEEeCCCeEEEEeCCCC----eeEEEeecccccEEEEEEcCC---CCeEEEEeCCCc
Q 021247 206 LVYSPV------------DPRVLFSASDDTHVHMYDAEGK----SLVTAMSGHASWVLSVDASPD---GAAITTGSSDRT 266 (315)
Q Consensus 206 ~~~~~~------------~~~~l~s~~~d~~i~~wd~~~~----~~~~~~~~~~~~i~~~~~~~~---~~~l~s~~~d~~ 266 (315)
+.|+|. ++.++++++.|+.|++||++.+ .....+.+|...|.+++|+|+ +.+|++++.||.
T Consensus 151 l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~ 230 (753)
T 3jro_A 151 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT 230 (753)
T ss_dssp EEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSC
T ss_pred EEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCE
Confidence 999995 5789999999999999998765 556677899999999999999 899999999999
Q ss_pred EEEEecCccc-----eehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeecC
Q 021247 267 VKLWDLNMRA-----AMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 267 i~iwd~~~~~-----~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
|++||++.+. .......|...|++++|+|+|.+|++++.||.|++|++.
T Consensus 231 I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 231 CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp EEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred EEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 9999998763 333445688899999999999999999999999999863
No 104
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-37 Score=268.01 Aligned_cols=267 Identities=12% Similarity=0.134 Sum_probs=212.4
Q ss_pred hccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECC
Q 021247 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90 (315)
Q Consensus 11 ~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~ 90 (315)
+.-...|.+|+|+|++. ++||||.|++|+ ++... +.+.+|...|.+++|+|+| .++.+++|+.+
T Consensus 12 ~~~~~~v~sv~~SpDG~----~iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~ 75 (588)
T 2j04_A 12 KEFEDWKNNLTWARDGT----LYLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLE-------FENKLDFELAQ 75 (588)
T ss_dssp CCCSSSSCCEEECTTSC----EEEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCC
T ss_pred hHhhccEEEEEECCCCC----EEEEEcCCceee--ccccc---ceecCCCccEEEEEECCCC-------CcceEEEEeCC
Confidence 34567999999999986 799999999999 64444 4457999999999999998 56666666654
Q ss_pred CCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCC
Q 021247 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDG 170 (315)
Q Consensus 91 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 170 (315)
....+ .+ .+...|.+++|+|+|..+ ++++.||+|++||... .+..+. +.. ......+.+++|+|+|
T Consensus 76 ~~~~~-~~-~~~~~V~~vawSPdG~~L-As~s~dg~V~iwd~~~--~l~~l~-~~~--------~~~~~sv~svafSPDG 141 (588)
T 2j04_A 76 QNGLL-NS-QPVCYPRVCKPSPIDDWM-AVLSNNGNVSVFKDNK--MLTNLD-SKG--------NLSSRTYHCFEWNPIE 141 (588)
T ss_dssp SSCSS-TT-SCSCCEEEEEECSSSSCE-EEEETTSCEEEEETTE--EEEECC-CSS--------CSTTTCEEEEEECSSS
T ss_pred CceEe-ec-CCCCcEEEEEECCCCCEE-EEEeCCCcEEEEeCCc--eeeecc-CCC--------ccccccEEEEEEcCCC
Confidence 33222 22 336789999999999976 5778999999999643 333332 111 0012248899999999
Q ss_pred CEEEEecCCCcEEEEEccccee-------eeee----cCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCee---E
Q 021247 171 RRIACGSMDGTISVFDVTRAKF-------LHHL----EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSL---V 236 (315)
Q Consensus 171 ~~l~~~s~dg~i~i~d~~~~~~-------~~~~----~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~---~ 236 (315)
++|++|+.||+|++||+.++.. +..+ .+|...|.+++|+|+ + +++++.|+++++||..++.. .
T Consensus 142 ~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd-g--Laass~D~tVrlWd~~~~~~~~~~ 218 (588)
T 2j04_A 142 SSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYED-V--LVAALSNNSVFSMTVSASSHQPVS 218 (588)
T ss_dssp SCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT-E--EEEEETTCCEEEECCCSSSSCCCE
T ss_pred CEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCC-c--EEEEeCCCeEEEEECCCCccccce
Confidence 9999999999999999987752 4555 667889999999994 4 88999999999999987763 3
Q ss_pred EEe-ecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEE--eeCCCEEEEEeCCCcEEEee
Q 021247 237 TAM-SGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSF--RPLGGRVVSVSDDKSISLYE 313 (315)
Q Consensus 237 ~~~-~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~s~~~d~~i~i~~ 313 (315)
..+ .+|...|.+++|+ ++.|++++ +++|++||+..++......+|.+.++.++| +|++..|++++.||+ +||.
T Consensus 219 ~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~ 294 (588)
T 2j04_A 219 RMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLL 294 (588)
T ss_dssp EEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEE
T ss_pred eeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEe
Confidence 455 4788899999999 58889887 699999999987663333389999999999 999999999999999 9998
Q ss_pred c
Q 021247 314 Y 314 (315)
Q Consensus 314 ~ 314 (315)
+
T Consensus 295 ~ 295 (588)
T 2j04_A 295 E 295 (588)
T ss_dssp S
T ss_pred e
Confidence 6
No 105
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-35 Score=254.66 Aligned_cols=248 Identities=24% Similarity=0.378 Sum_probs=207.1
Q ss_pred ccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECC-
Q 021247 12 AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD- 90 (315)
Q Consensus 12 ~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~- 90 (315)
.|...|++++|+|.+. +|++|+.||.|++|+..+.+....+.+|...|.++++ ++.++++++.|+.|++||+.
T Consensus 132 ~~~~~v~~v~~s~~~~----~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~ 205 (401)
T 4aez_A 132 DESTYVASVKWSHDGS----FLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRI 205 (401)
T ss_dssp CTTCCEEEEEECTTSS----EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTS
T ss_pred CCCCCEEEEEECCCCC----EEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEeccc
Confidence 4899999999999664 7999999999999999998888888899999999999 56799999999999999999
Q ss_pred CCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCC
Q 021247 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDG 170 (315)
Q Consensus 91 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 170 (315)
....+..+..|...|.+++|+|+++.+ ++++.|+.|++||+++.+.+..+. .+...|.+++|+|++
T Consensus 206 ~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~d~~v~iwd~~~~~~~~~~~-------------~~~~~v~~~~~~p~~ 271 (401)
T 4aez_A 206 ANHQIGTLQGHSSEVCGLAWRSDGLQL-ASGGNDNVVQIWDARSSIPKFTKT-------------NHNAAVKAVAWCPWQ 271 (401)
T ss_dssp SSCEEEEEECCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTCSSEEEEEC-------------CCSSCCCEEEECTTS
T ss_pred CcceeeEEcCCCCCeeEEEEcCCCCEE-EEEeCCCeEEEccCCCCCccEEec-------------CCcceEEEEEECCCC
Confidence 456677888899999999999988754 678899999999999877665553 234458999999976
Q ss_pred C-EEEEec--CCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEE--EeCCCeEEEEeCCCCeeEE--Eeeccc
Q 021247 171 R-RIACGS--MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFS--ASDDTHVHMYDAEGKSLVT--AMSGHA 243 (315)
Q Consensus 171 ~-~l~~~s--~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s--~~~d~~i~~wd~~~~~~~~--~~~~~~ 243 (315)
. .+++++ .|+.|++||+.+++.+..+. +...+.++.|+| +++++++ |+.|+.|++||+..+.... .+.+|.
T Consensus 272 ~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~-~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~ 349 (401)
T 4aez_A 272 SNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSP-HSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHD 349 (401)
T ss_dssp TTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECS-SSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCS
T ss_pred CCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECC-CCCeEEEEeecCCCcEEEEecCCccceeEEEecCCC
Confidence 5 555554 79999999999998887776 556899999999 5566766 4489999999998865443 467899
Q ss_pred ccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcc
Q 021247 244 SWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSM 281 (315)
Q Consensus 244 ~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 281 (315)
..|.+++|+|++++|++++.||.|++|++..++.+...
T Consensus 350 ~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 350 TRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp SCCCEEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 99999999999999999999999999999988766543
No 106
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.3e-36 Score=264.66 Aligned_cols=250 Identities=17% Similarity=0.166 Sum_probs=196.8
Q ss_pred eeeccccccceEEEEeCC-CCCEEEEeeCCCeEEEEECCCCceeE--EeeCCcccEEEEEECCCCCeEEEEecCCCeEEE
Q 021247 53 ERTNTGHCLGVVSVAAHP-SGIIAASASLDSFVRVFDVDTNASIA--TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKL 129 (315)
Q Consensus 53 ~~~~~~h~~~v~~~~~~~-~g~~l~s~~~d~~i~~w~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~ 129 (315)
.....+|...|++|+|+| ++.+|++|+.||+|+|||+.++.... .+..|...|.+++|+|.+..++++++.|++|++
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 334456788899999999 46799999999999999998776443 445788999999999965546688999999999
Q ss_pred EecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEc
Q 021247 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS 209 (315)
Q Consensus 130 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 209 (315)
||+++........ . ......+.+++|+|++++|++|+.||.|++||++ ++.+..+.+|...|.+++|+
T Consensus 192 wd~~~~~~~~~~~-~----------~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~ 259 (435)
T 4e54_B 192 QDFKGNILRVFAS-S----------DTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALN 259 (435)
T ss_dssp EETTSCEEEEEEC-C----------SSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEEC
T ss_pred eeccCCceeEEec-c----------CCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeec
Confidence 9997643322221 1 1123347789999999999999999999999986 45667788999999999999
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCCCeeEE---EeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehccccccc
Q 021247 210 PVDPRVLFSASDDTHVHMYDAEGKSLVT---AMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTD 286 (315)
Q Consensus 210 ~~~~~~l~s~~~d~~i~~wd~~~~~~~~---~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 286 (315)
|.+..++++++.|+.|++||++...... ...+|...|++++|+|++++|++++.|+.|++||+..++....+..|..
T Consensus 260 p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~ 339 (435)
T 4e54_B 260 PCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPH 339 (435)
T ss_dssp TTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCC
T ss_pred CCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccc
Confidence 9877899999999999999998654332 3357899999999999999999999999999999998776555544432
Q ss_pred ------ceEEEEEeeCCCEEEEEe------------CCCcEEEeec
Q 021247 287 ------QVWGVSFRPLGGRVVSVS------------DDKSISLYEY 314 (315)
Q Consensus 287 ------~v~~~~~s~~~~~l~s~~------------~d~~i~i~~~ 314 (315)
.+..+.|+|++..+++++ +++.|++||.
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~ 385 (435)
T 4e54_B 340 RHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDG 385 (435)
T ss_dssp CCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECS
T ss_pred cccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEEC
Confidence 233456666666665543 3468999985
No 107
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-36 Score=253.77 Aligned_cols=259 Identities=13% Similarity=0.070 Sum_probs=202.3
Q ss_pred cEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECC---------CCceeEEee-C
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD---------TNASIATLE-A 100 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~---------~~~~~~~~~-~ 100 (315)
.+|++|+.||+|++||..+.+....+. ...|.++.++|+ +++++.|++|++|+.. +++.+..+. .
T Consensus 49 ~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~ 123 (343)
T 3lrv_A 49 WVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVD 123 (343)
T ss_dssp EEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred CEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecC
Confidence 479999999999999998887766554 467788888888 8999999999999765 444444443 4
Q ss_pred CcccEEEEEECC--CCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecC
Q 021247 101 SPSEVWQMQFDP--KGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSM 178 (315)
Q Consensus 101 ~~~~v~~~~~~~--~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~ 178 (315)
|..+|.+++|+| +++. +++++.|++|++||+++++....... .+...+.+++|+|++.+|++|+.
T Consensus 124 ~~~~v~~~~~~~~~~~~~-l~s~s~dg~i~~wd~~~~~~~~~~~~------------~~~~~i~~~~~~pdg~~lasg~~ 190 (343)
T 3lrv_A 124 SANEIIYMYGHNEVNTEY-FIWADNRGTIGFQSYEDDSQYIVHSA------------KSDVEYSSGVLHKDSLLLALYSP 190 (343)
T ss_dssp CSSCEEEEECCC---CCE-EEEEETTCCEEEEESSSSCEEEEECC------------CSSCCCCEEEECTTSCEEEEECT
T ss_pred CCCCEEEEEcCCCCCCCE-EEEEeCCCcEEEEECCCCcEEEEEec------------CCCCceEEEEECCCCCEEEEEcC
Confidence 557899999999 8775 46788999999999998877544321 12234889999999999999999
Q ss_pred CCcEEEEEcccceee-eeecC-CccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeec---ccccEE--EEEE
Q 021247 179 DGTISVFDVTRAKFL-HHLEG-HFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSG---HASWVL--SVDA 251 (315)
Q Consensus 179 dg~i~i~d~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~---~~~~i~--~~~~ 251 (315)
||.|++||+++++.. ..+.. |..+|.+++|+| ++.+|++++++ .|++||++..+.+..+.. |...+. +++|
T Consensus 191 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~-~g~~l~s~~~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (343)
T 3lrv_A 191 DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFAD-NGYWMVVECDQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDI 268 (343)
T ss_dssp TSCEEEEESSCTTSCCEECCCCTTSCEEEEEECT-TSSEEEEEESS-BEEEEETTSSTTCBSSCCCBC-----CCEEEEE
T ss_pred CCEEEEEECCCCCCCccEEeccCCCCEEEEEEeC-CCCEEEEEeCC-eEEEEEcCCCCcceeecccccccccccceEEEE
Confidence 999999999998877 77787 999999999999 67889999855 999999988765443332 333333 6999
Q ss_pred cCCCCeEEEEeC-CCcEEEEecCccceehcccccccceEEEEEee---CCCEEEEEeCCCcEEEee
Q 021247 252 SPDGAAITTGSS-DRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRP---LGGRVVSVSDDKSISLYE 313 (315)
Q Consensus 252 ~~~~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~s~~~d~~i~i~~ 313 (315)
+|++++|++++. |+.|++|++......-.. .++..+.|+| ++..+++++.|+.+.++-
T Consensus 269 ~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 269 DDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAIL 330 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEE
T ss_pred CCCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEE
Confidence 999999999998 999999999654322111 5677888888 888899999999888764
No 108
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-37 Score=283.55 Aligned_cols=252 Identities=23% Similarity=0.296 Sum_probs=210.4
Q ss_pred hhhhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCC--CCcceeeccccccceEEEEeCCC--CCEEEEeeCCC
Q 021247 7 KSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPD--DMQLERTNTGHCLGVVSVAAHPS--GIIAASASLDS 82 (315)
Q Consensus 7 ~~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~--~~~~~~~~~~h~~~v~~~~~~~~--g~~l~s~~~d~ 82 (315)
..+..+|.+.|++++|+|.+. +|++|+.||.|++|+.. +.+....+.+|..+|.+++|+|+ +.++++++.||
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~----~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg 77 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGK----RLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 77 (753)
T ss_dssp ------CCCCEEEECCCSSSC----CEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS
T ss_pred eeecccCcceeEEEEECCCCC----eEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC
Confidence 456789999999999999765 69999999999999986 44566678899999999999988 99999999999
Q ss_pred eEEEEECCCCc--eeEEeeCCcccEEEEEECCC--CCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCC
Q 021247 83 FVRVFDVDTNA--SIATLEASPSEVWQMQFDPK--GTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSK 158 (315)
Q Consensus 83 ~i~~w~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (315)
.|++||+.++. .+..+..|...|.+++|+|+ ++. +++++.|+.|++||+++.+...... ...+.
T Consensus 78 ~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~-l~sgs~dg~I~vwdl~~~~~~~~~~-----------~~~~~ 145 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPL-LLVASSDGKVSVVEFKENGTTSPII-----------IDAHA 145 (753)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSE-EEEEETTSEEEEEECCSSSCCCCEE-----------EECCS
T ss_pred eEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCE-EEEEeCCCcEEEEEeecCCCcceeE-----------eecCC
Confidence 99999999886 66777889999999999998 664 5778899999999998753322211 12345
Q ss_pred cceEEEEECC-------------CCCEEEEecCCCcEEEEEcccc----eeeeeecCCccceEEEEEcCCC--CcEEEEE
Q 021247 159 KFVLSVAWSP-------------DGRRIACGSMDGTISVFDVTRA----KFLHHLEGHFMPVRSLVYSPVD--PRVLFSA 219 (315)
Q Consensus 159 ~~i~~~~~~~-------------~~~~l~~~s~dg~i~i~d~~~~----~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~ 219 (315)
..|.+++|+| ++++|++|+.||.|++||++++ .....+.+|..+|.+++|+|.+ +.+++++
T Consensus 146 ~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~ 225 (753)
T 3jro_A 146 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV 225 (753)
T ss_dssp SCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred CceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEE
Confidence 5699999999 5899999999999999999876 5567788999999999999954 8899999
Q ss_pred eCCCeEEEEeCCCCe-----eEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCc
Q 021247 220 SDDTHVHMYDAEGKS-----LVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274 (315)
Q Consensus 220 ~~d~~i~~wd~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 274 (315)
+.|+.|++||.+.+. .......|...|++++|+|++++|++|+.||.|++|+++.
T Consensus 226 s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 226 SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp ESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred ecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 999999999988753 2223345888999999999999999999999999999874
No 109
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-37 Score=271.65 Aligned_cols=240 Identities=12% Similarity=0.128 Sum_probs=184.0
Q ss_pred CCCCCEEEEeeCCCeEEEEECCCCcee----EEeeCCcccEEEEEECCCC-----CeEEEEecCCCeEEEEecCCcceee
Q 021247 69 HPSGIIAASASLDSFVRVFDVDTNASI----ATLEASPSEVWQMQFDPKG-----TTLAVAGGGSASVKLWDTATWNLIA 139 (315)
Q Consensus 69 ~~~g~~l~s~~~d~~i~~w~~~~~~~~----~~~~~~~~~v~~~~~~~~~-----~~~~~~~~~d~~i~~~d~~~~~~~~ 139 (315)
+|++.++++++.|++|+||++.+++.. ..+..+.+.|+.++|+|++ ..++++++.|++|++||+...+...
T Consensus 170 ~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~ 249 (524)
T 2j04_B 170 NEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDV 249 (524)
T ss_dssp ------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSS
T ss_pred chhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccc
Confidence 344455666778999999999877642 3456677889999999972 2467889999999999997653210
Q ss_pred --eecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccce-eeeeecCCccceEEE--EEcCCCC-
Q 021247 140 --TLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK-FLHHLEGHFMPVRSL--VYSPVDP- 213 (315)
Q Consensus 140 --~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~-~~~~~~~~~~~v~~~--~~~~~~~- 213 (315)
...... .......|...|.+++|+++ ..|++|+.||.|++||++++. ....+.+|...|+++ .|+| ++
T Consensus 250 ~~~~~~~~----p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~-~g~ 323 (524)
T 2j04_B 250 HVFKMCEK----PSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSD-FED 323 (524)
T ss_dssp SEEECCCS----CSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCT-TSC
T ss_pred ccceeecC----ceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCC-CCC
Confidence 000000 00112345677999999986 489999999999999998764 445678999999999 4555 54
Q ss_pred cEEEEEeCCCeEEEEeCCCCeeEEEeecccc--cEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEE
Q 021247 214 RVLFSASDDTHVHMYDAEGKSLVTAMSGHAS--WVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGV 291 (315)
Q Consensus 214 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~ 291 (315)
++|++++.|++|++||++.++.+..+.+|.. .|.+++|+|+++.+++++.|++|++||++.+..+.++.+|.+.|++|
T Consensus 324 ~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sv 403 (524)
T 2j04_B 324 TVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAI 403 (524)
T ss_dssp CEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEE
T ss_pred eEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEE
Confidence 8999999999999999988766655666643 47899999999999999999999999999988878888999999999
Q ss_pred EEeeCCCEEEEEeCCCcEEEeec
Q 021247 292 SFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 292 ~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
+|||+|++|++++.||+|+||+.
T Consensus 404 a~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 404 GVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp ECCSSCCBCEEEETTTEEECCBS
T ss_pred EeCCCCCeEEEEECCCEEEEEec
Confidence 99999999999999999999985
No 110
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=7.2e-36 Score=251.31 Aligned_cols=245 Identities=13% Similarity=0.097 Sum_probs=205.4
Q ss_pred eeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCc---eeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEE
Q 021247 54 RTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA---SIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLW 130 (315)
Q Consensus 54 ~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~ 130 (315)
....+|...|.+++|+|++.+|++++.|+.|++|++.++. .......|...|.+++|+|+++.++++++.|+.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 3345799999999999999999999999999999998876 3445557888999999999987234677899999999
Q ss_pred ec-CCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEccc---------ceeeeeecCCc
Q 021247 131 DT-ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR---------AKFLHHLEGHF 200 (315)
Q Consensus 131 d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~---------~~~~~~~~~~~ 200 (315)
|+ .+.+. ..+.. ..|...|.+++|+| +++|++++.|+.|++||+++ ++.+..+. |.
T Consensus 85 d~~~~~~~-~~~~~-----------~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~ 150 (342)
T 1yfq_A 85 DLIGSPSF-QALTN-----------NEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VK 150 (342)
T ss_dssp CSSSSSSE-EECBS-----------CCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SC
T ss_pred EeccCCce-Eeccc-----------cCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eC
Confidence 99 76544 22210 01556699999999 99999999999999999987 66666665 88
Q ss_pred cceEEEEEcCCCCcEEEEEeCCCeEEEEeCCC-Ce--eEEEeecccccEEEEEEcC-CCCeEEEEeCCCcEEEEecCcc-
Q 021247 201 MPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG-KS--LVTAMSGHASWVLSVDASP-DGAAITTGSSDRTVKLWDLNMR- 275 (315)
Q Consensus 201 ~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-~~--~~~~~~~~~~~i~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~- 275 (315)
..+.++.|+|.. +++++.|+.|++||++. .. .......|...+.+++|+| +++++++++.||.|++|+++..
T Consensus 151 ~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~ 227 (342)
T 1yfq_A 151 NKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQG 227 (342)
T ss_dssp CCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTC
T ss_pred CceEEEEecCCc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCC
Confidence 899999999743 99999999999999987 43 3344557888999999999 9999999999999999999876
Q ss_pred -----ceehccccccc---------ceEEEEEeeCCCEEEEEeCCCcEEEeecC
Q 021247 276 -----AAMQSMTNHTD---------QVWGVSFRPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 276 -----~~~~~~~~~~~---------~v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
+....+..|.. .|++++|+|++++|++++.||.|++||+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 228 DDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp CSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred cccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCc
Confidence 66666777755 99999999999999999999999999963
No 111
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1e-35 Score=252.94 Aligned_cols=250 Identities=15% Similarity=0.194 Sum_probs=192.9
Q ss_pred hhccccceEEEEEeecC-----CCCCcEEEEeeCCCcEEEEcCCCCccee---------eccccccceEEEEeCCCCCEE
Q 021247 10 ENAHEESVWAVTWVPAT-----ETRPALLLTGSLDETVKLWRPDDMQLER---------TNTGHCLGVVSVAAHPSGIIA 75 (315)
Q Consensus 10 ~~~h~~~v~~v~~~~~~-----~~~~~~l~sgs~d~~v~~w~~~~~~~~~---------~~~~h~~~v~~~~~~~~g~~l 75 (315)
+.+|++.|.++++.+.. +.....|++|+.|+.+++|+........ ....+...+.+++|+|+|+++
T Consensus 69 l~~~~~~v~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~l 148 (365)
T 4h5i_A 69 LEDNDDSPTAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVA 148 (365)
T ss_dssp CCTTSCCCCEEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCE
T ss_pred ccCCCCceEEEEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEE
Confidence 45788899999876421 0011123344567889999865432211 112344568899999999987
Q ss_pred E--EeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCc
Q 021247 76 A--SASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTD 153 (315)
Q Consensus 76 ~--s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 153 (315)
+ +++.|++|++||+.+++.+..+. +..+|.+++|+|+++.+ ++++ ++.+.+|+..+++.+.....
T Consensus 149 a~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l-~s~s-~~~~~~~~~~~~~~~~~~~~---------- 215 (365)
T 4h5i_A 149 AIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVV-AYIT-GSSLEVISTVTGSCIARKTD---------- 215 (365)
T ss_dssp EEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEE-EEEC-SSCEEEEETTTCCEEEEECC----------
T ss_pred EEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceE-Eecc-ceeEEEEEeccCcceeeeec----------
Confidence 6 45579999999999999888876 56789999999999865 4555 45677777766655433221
Q ss_pred cCCCCcceEEEEECCCCCEEEEecCCC----cEEEEEccccee----eeeecCCccceEEEEEcCCCCcEEEEEeCCCeE
Q 021247 154 KSSSKKFVLSVAWSPDGRRIACGSMDG----TISVFDVTRAKF----LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHV 225 (315)
Q Consensus 154 ~~~~~~~i~~~~~~~~~~~l~~~s~dg----~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i 225 (315)
..+...|.+++|+|+++++++++.|+ .++.||+..... ...+.+|..+|++++|+| ++++|++|+.|+.|
T Consensus 216 -~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp-dg~~lasgs~D~~V 293 (365)
T 4h5i_A 216 -FDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM-KGELAVLASNDNSI 293 (365)
T ss_dssp -CCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT-TSCEEEEEETTSCE
T ss_pred -CCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECC-CCCceEEEcCCCEE
Confidence 23455699999999999999998877 588899865543 345678999999999999 67899999999999
Q ss_pred EEEeCCCCeeEEEe-ecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCc
Q 021247 226 HMYDAEGKSLVTAM-SGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274 (315)
Q Consensus 226 ~~wd~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 274 (315)
++||.++++++..+ .+|...|++++|+|+|++|+||+.|++|+||++..
T Consensus 294 ~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 294 ALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred EEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 99999999888774 78999999999999999999999999999999964
No 112
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2.4e-35 Score=249.80 Aligned_cols=245 Identities=15% Similarity=0.155 Sum_probs=188.3
Q ss_pred EEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecC
Q 021247 44 LWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGG 123 (315)
Q Consensus 44 ~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 123 (315)
+|++.+.+.......|..+|.+++|+|+|.+|++|+.|+ +++|++.+.......... .+..+++.++++.++++++.
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 79 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVTGV 79 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEECSS
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEECC
Confidence 345555555556678999999999999999999888765 899999887665544332 46678888888888888889
Q ss_pred CCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccc-eeeeeecCCccc
Q 021247 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRA-KFLHHLEGHFMP 202 (315)
Q Consensus 124 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~-~~~~~~~~~~~~ 202 (315)
|++|++||..+++.+..+..+ ..|.+++++++. ++++ .++.|++||+.++ +.+..+.. +
T Consensus 80 d~~v~iWd~~~~~~~~~~~~~--------------~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~ 139 (355)
T 3vu4_A 80 KEVVHIWDDVKKQDVSRIKVD--------------APVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---F 139 (355)
T ss_dssp TTEEEEEETTTTEEEEEEECS--------------SCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---E
T ss_pred ccEEEEEECCCCcEEEEEECC--------------CceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---C
Confidence 999999999998887766432 248899998764 3333 4789999999887 65555543 4
Q ss_pred eEEEEEcCCCCcEEEE--EeCCCeEEEEeCCCCe----------------eEEEeecccccEEEEEEcCCCCeEEEEeCC
Q 021247 203 VRSLVYSPVDPRVLFS--ASDDTHVHMYDAEGKS----------------LVTAMSGHASWVLSVDASPDGAAITTGSSD 264 (315)
Q Consensus 203 v~~~~~~~~~~~~l~s--~~~d~~i~~wd~~~~~----------------~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d 264 (315)
...+++++ .+++. |+.||.|++||++.+. .+..+.+|...|.+++|+|++++|++|+.|
T Consensus 140 ~~~~~~s~---~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d 216 (355)
T 3vu4_A 140 GGVCEFSN---GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQD 216 (355)
T ss_dssp EEEEEEET---TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CceEEEEc---cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCC
Confidence 44556666 34544 6889999999998754 256788999999999999999999999999
Q ss_pred Cc-EEEEecCccceehccc-c-cccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 265 RT-VKLWDLNMRAAMQSMT-N-HTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 265 ~~-i~iwd~~~~~~~~~~~-~-~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
++ |++||+++++.+.++. + |...|++++|+|+|++|++++.|++|+|||+
T Consensus 217 ~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 217 GTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp CSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred CCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 98 9999999999988887 5 9999999999999999999999999999997
No 113
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.4e-36 Score=259.44 Aligned_cols=248 Identities=12% Similarity=0.077 Sum_probs=175.8
Q ss_pred cEEEEeeCCCcEEEEcCCCCcce-----eeccccccceEEEEeCC--------CCCEEEEeeCCCeEEEEECCCCceeEE
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLE-----RTNTGHCLGVVSVAAHP--------SGIIAASASLDSFVRVFDVDTNASIAT 97 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~-----~~~~~h~~~v~~~~~~~--------~g~~l~s~~~d~~i~~w~~~~~~~~~~ 97 (315)
.+|++|+.|++|++|+.++.+.. ..+.+|.+.|++++|+| +|++|++++.|++|||||+.++..+..
T Consensus 102 ~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~ 181 (393)
T 4gq1_A 102 LFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA 181 (393)
T ss_dssp EEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE
T ss_pred CEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee
Confidence 37999999999999998776542 34679999999999987 889999999999999999998888888
Q ss_pred eeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEec
Q 021247 98 LEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS 177 (315)
Q Consensus 98 ~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s 177 (315)
+..+..++.+++|+|++..++++++.|++|++||+++++......... ..+...+.....
T Consensus 182 ~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~---------~~~~~~~~s~~~----------- 241 (393)
T 4gq1_A 182 GYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTE---------LVKNPWLLTLNT----------- 241 (393)
T ss_dssp EEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-------------------CSCCCSEEEES-----------
T ss_pred ecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccC---------CcccceEEeccc-----------
Confidence 878889999999999988778899999999999998765433221100 000011111111
Q ss_pred CCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEc-----
Q 021247 178 MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDAS----- 252 (315)
Q Consensus 178 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~----- 252 (315)
..........+|...+.++.|.+.+++.+++++.|+.+++||+..+.....+..|...+..+.+.
T Consensus 242 ----------~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 311 (393)
T 4gq1_A 242 ----------LPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQG 311 (393)
T ss_dssp ----------GGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEE
T ss_pred ----------ccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccc
Confidence 11111222346778889999986688999999999999999998776655555554444433332
Q ss_pred -------------C--CCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCc
Q 021247 253 -------------P--DGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKS 308 (315)
Q Consensus 253 -------------~--~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~ 308 (315)
| ++.++++|+.||+|++||+..++.......|..+|++++|||+|++||++++||.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv 382 (393)
T 4gq1_A 312 ISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSV 382 (393)
T ss_dssp ECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEE
T ss_pred ccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 2 3346788889999999999998888888889999999999999999999998775
No 114
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=9.2e-35 Score=237.71 Aligned_cols=278 Identities=15% Similarity=0.154 Sum_probs=184.7
Q ss_pred ceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCC---cceeeccccccceEEEEeCCCCCEEEE--eeCCCeEEEEECC
Q 021247 16 SVWAVTWVPATETRPALLLTGSLDETVKLWRPDDM---QLERTNTGHCLGVVSVAAHPSGIIAAS--ASLDSFVRVFDVD 90 (315)
Q Consensus 16 ~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~---~~~~~~~~h~~~v~~~~~~~~g~~l~s--~~~d~~i~~w~~~ 90 (315)
+|.++.|-..+.+ + +.+.......|++|++.+. +......+|..+|..+.+.|+..-|++ -+.=..-.++-+-
T Consensus 41 ~~~~~~~~~~~~~-~-~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla 118 (356)
T 2w18_A 41 DVSAMFWERAGCK-E-PCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALF 118 (356)
T ss_dssp EEEEEEEC----C-E-EEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEEC
T ss_pred EEeeeeeccCCCC-c-cEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEE
Confidence 5677777655532 2 3444455689999998876 566667777777777777764322221 1111111111111
Q ss_pred --CC----ceeEEeeCCcccEEEEEECCCCCeEEEEe--cCCCeEEEEecCC-cceeeeecCCCCCCCCCCccCCCCcce
Q 021247 91 --TN----ASIATLEASPSEVWQMQFDPKGTTLAVAG--GGSASVKLWDTAT-WNLIATLSIPRPEGLKPTDKSSSKKFV 161 (315)
Q Consensus 91 --~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~d~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i 161 (315)
.. ........+...++.+ ++++ ++.++ +.|++|++|++.. ++.+..+..+.+ .+
T Consensus 119 ~spd~~~~~~~l~s~g~~~~v~~l---~~g~-lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~-------------~v 181 (356)
T 2w18_A 119 CSSDDESEKQVLLKSGNIKAVLGL---TKRR-LVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPP-------------EE 181 (356)
T ss_dssp C------CCEEEEEEEEEEEEEEE---TTTE-EEEEESSSTTCEEEEEEECTTSCEEEEEEECCC-------------SS
T ss_pred ECCCccccccEEEeCCCeEEEEec---CCCc-EEEecccCCCCcEEEEEECCCCceeeeeccCCC-------------ce
Confidence 00 0000011122223333 3333 44442 2588888888843 555555543322 36
Q ss_pred EEEEECC---CCCEEEEecCCCcEEEEEcccceeeeeecCCc---cceEEEEEcCCCCcEE------------EEEeCCC
Q 021247 162 LSVAWSP---DGRRIACGSMDGTISVFDVTRAKFLHHLEGHF---MPVRSLVYSPVDPRVL------------FSASDDT 223 (315)
Q Consensus 162 ~~~~~~~---~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~l------------~s~~~d~ 223 (315)
+.++|++ ++..|++++.|++|++||+.+++.+..+.+|. ..+.+++|+| ++.++ ++|+.|+
T Consensus 182 ~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSp-dG~~lvs~s~~~~~w~laSGs~D~ 260 (356)
T 2w18_A 182 TILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSE-MGLLFIVLSHPCAKESESLRSPVF 260 (356)
T ss_dssp CEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEE-TTEEEEEEC------------CCE
T ss_pred eeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECC-CCCEEEEeccCCCcceeeccCCCc
Confidence 6788888 77999999999999999999999999987653 3677789999 55554 6788899
Q ss_pred eEEEEeCCCCeeEEEe-----ecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceE-EEEEeeCC
Q 021247 224 HVHMYDAEGKSLVTAM-----SGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW-GVSFRPLG 297 (315)
Q Consensus 224 ~i~~wd~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~-~~~~s~~~ 297 (315)
+|++||..+++.+..+ .+|...+.+..++ +.++++|+.|++|+|||+.+++.++++.+|.+.+. .++|||+|
T Consensus 261 tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG 338 (356)
T 2w18_A 261 QLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTD 338 (356)
T ss_dssp EEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSS
T ss_pred EEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCC
Confidence 9999999998877654 3676665544444 77899999999999999999999999999987766 58999999
Q ss_pred CEEEEEeCCCcEEEeecC
Q 021247 298 GRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 298 ~~l~s~~~d~~i~i~~~~ 315 (315)
++|++++.|++|+|||+.
T Consensus 339 ~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 339 SHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp SEEEEECTTSCEEEEEEC
T ss_pred CEEEEEECCCcEEEecCC
Confidence 999999999999999974
No 115
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-35 Score=253.22 Aligned_cols=261 Identities=13% Similarity=0.183 Sum_probs=202.8
Q ss_pred hccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECC
Q 021247 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90 (315)
Q Consensus 11 ~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~ 90 (315)
.+|...|++|+|+|.+ .++.+.+|+.+..+. ..+ .|...|.+++|+|+|.+|++++.||.|++||..
T Consensus 49 ~gh~~~v~~V~FsPdg-----------~~~~~~~~~~~~~~~-~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~ 115 (588)
T 2j04_A 49 NCNSKNLFHVKEFPLE-----------FENKLDFELAQQNGL-LNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDN 115 (588)
T ss_dssp SSBGGGTEEEEEECCC-----------CCCTTTTSCCCSSCS-STT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETT
T ss_pred cCCCccEEEEEECCCC-----------CcceEEEEeCCCceE-eec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence 6899999999999965 466666665432222 222 457889999999999999999999999999964
Q ss_pred CCceeEEeeCCcc-----cEEEEEECCCCCeEEEEecCCCeEEEEecCCcce-------eeeecCCCCCCCCCCccCCCC
Q 021247 91 TNASIATLEASPS-----EVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNL-------IATLSIPRPEGLKPTDKSSSK 158 (315)
Q Consensus 91 ~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 158 (315)
. .+..+. |.. .+.+++|+|+|+.+ ++|+.||+|++||+.+++. +.++.... .+|.
T Consensus 116 ~--~l~~l~-~~~~~~~~sv~svafSPDG~~L-Asgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~---------~gh~ 182 (588)
T 2j04_A 116 K--MLTNLD-SKGNLSSRTYHCFEWNPIESSI-VVGNEDGELQFFSIRKNSENTPEFYFESSIRLSD---------AGSK 182 (588)
T ss_dssp E--EEEECC-CSSCSTTTCEEEEEECSSSSCE-EEEETTSEEEEEECCCCTTTCCCCEEEEEEECSC---------TTCC
T ss_pred c--eeeecc-CCCccccccEEEEEEcCCCCEE-EEEcCCCEEEEEECCCCccccccceeeeeeeccc---------cccc
Confidence 4 556666 554 49999999999865 6788999999999987643 23332111 2356
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEEccccee---eeee-cCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe
Q 021247 159 KFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF---LHHL-EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKS 234 (315)
Q Consensus 159 ~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~---~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~ 234 (315)
.+|.+++|+|+| +++++.|+.+++||+..+.. ...+ .+|...|.+++|+ ++.+++++ ++.|++||..++.
T Consensus 183 ~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs---g~~LASa~-~~tIkLWd~~~~~ 256 (588)
T 2j04_A 183 DWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV---DYKVVLTC-PGYVHKIDLKNYS 256 (588)
T ss_dssp CCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE---TTEEEEEC-SSEEEEEETTTTE
T ss_pred ccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE---CCEEEEEe-CCeEEEEECCCCe
Confidence 789999999999 88888999999999987763 2456 4788899999998 36888887 6999999999887
Q ss_pred eEEEeecccccEEEEEE--cCCCCeEEEEeCCCcEEEEecCccc-----------------------eehcccccccceE
Q 021247 235 LVTAMSGHASWVLSVDA--SPDGAAITTGSSDRTVKLWDLNMRA-----------------------AMQSMTNHTDQVW 289 (315)
Q Consensus 235 ~~~~~~~~~~~i~~~~~--~~~~~~l~s~~~d~~i~iwd~~~~~-----------------------~~~~~~~~~~~v~ 289 (315)
......+|...+..+.+ +|++..+++++.||+ ++|..+.-. .+..+.+ ...|.
T Consensus 257 ~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~-~~~I~ 334 (588)
T 2j04_A 257 ISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYET-TLVIH 334 (588)
T ss_dssp EEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCC-EEEEE
T ss_pred EEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeecc-ceEEE
Confidence 75544489999999999 999999999999999 999874210 0111111 33589
Q ss_pred EEEEeeCCCEEEEEeC
Q 021247 290 GVSFRPLGGRVVSVSD 305 (315)
Q Consensus 290 ~~~~s~~~~~l~s~~~ 305 (315)
+++|||||..+|+++.
T Consensus 335 ~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 335 GISLSPDGYSIAIVYD 350 (588)
T ss_dssp EEEECTTSSEEEEEEE
T ss_pred EEEECCCCCEEEEEEe
Confidence 9999999999998764
No 116
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=6.8e-35 Score=251.16 Aligned_cols=249 Identities=18% Similarity=0.291 Sum_probs=204.5
Q ss_pred hhhccccceEEEEEee-cCCCCCcEEEEeeCCCcEEEEcCCCC-------cceeeccccccceEEEEeCCCC-CEEEEee
Q 021247 9 VENAHEESVWAVTWVP-ATETRPALLLTGSLDETVKLWRPDDM-------QLERTNTGHCLGVVSVAAHPSG-IIAASAS 79 (315)
Q Consensus 9 ~~~~h~~~v~~v~~~~-~~~~~~~~l~sgs~d~~v~~w~~~~~-------~~~~~~~~h~~~v~~~~~~~~g-~~l~s~~ 79 (315)
.+.+|.+.|++++|+| .+. +|++|+.||.|++|+..+. +....+.+|...|.+++|+|++ .++++++
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~----~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~ 151 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDN----VIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAG 151 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTT----EEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEE
T ss_pred eEecCCCCEEEEEeCCCCCC----EEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEc
Confidence 4568999999999999 443 8999999999999998876 4456778899999999999998 6999999
Q ss_pred CCCeEEEEECCCCceeEEe--eCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeec-CCCCCCCCCCccCC
Q 021247 80 LDSFVRVFDVDTNASIATL--EASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS-IPRPEGLKPTDKSS 156 (315)
Q Consensus 80 ~d~~i~~w~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~ 156 (315)
.|+.|++||+.+++.+..+ ..|...|.+++|+|+++.+ ++++.|+.|++||+++++.+..+. .+.
T Consensus 152 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~----------- 219 (402)
T 2aq5_A 152 CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALI-CTSCRDKRVRVIEPRKGTVVAEKDRPHE----------- 219 (402)
T ss_dssp TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCE-EEEETTSEEEEEETTTTEEEEEEECSSC-----------
T ss_pred CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEE-EEEecCCcEEEEeCCCCceeeeeccCCC-----------
Confidence 9999999999999998888 7889999999999998865 577899999999999888776652 211
Q ss_pred CCcceEEEEECCCCCEEEEe---cCCCcEEEEEccccee-eeee-cCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCC
Q 021247 157 SKKFVLSVAWSPDGRRIACG---SMDGTISVFDVTRAKF-LHHL-EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAE 231 (315)
Q Consensus 157 ~~~~i~~~~~~~~~~~l~~~---s~dg~i~i~d~~~~~~-~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~ 231 (315)
...+.+++|+|++++|++| +.|+.|++||+++.+. .... ..|...+.++.|+|++..++++++.|+.|++||+.
T Consensus 220 -~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~ 298 (402)
T 2aq5_A 220 -GTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEIT 298 (402)
T ss_dssp -SSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEEC
T ss_pred -CCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEec
Confidence 1126789999999999999 8999999999987654 2222 24667899999999554444567789999999998
Q ss_pred CCee-EEEeec--ccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccc
Q 021247 232 GKSL-VTAMSG--HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRA 276 (315)
Q Consensus 232 ~~~~-~~~~~~--~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 276 (315)
.++. +..+.. |...|.+++|+|++.++++ .++.+++|++..+.
T Consensus 299 ~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 299 SEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERK 344 (402)
T ss_dssp SSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTE
T ss_pred CCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCc
Confidence 7763 444443 4588999999999988764 56799999987643
No 117
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-34 Score=250.05 Aligned_cols=241 Identities=12% Similarity=0.132 Sum_probs=202.3
Q ss_pred cceEEEEeCCCCCEEEEeeCCCeEEEEECCCCc---eeEEeeCC------------------------------------
Q 021247 61 LGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA---SIATLEAS------------------------------------ 101 (315)
Q Consensus 61 ~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~---~~~~~~~~------------------------------------ 101 (315)
.++.++.|+++|.+++++ .++.|++||+.+++ .+..+..+
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 478899999999976655 57899999999888 55444422
Q ss_pred ------------------cccEEEEEECCCCCeEEEEecCCCeEEEEecC--CcceeeeecCCCCCCCCCCccCCCCcce
Q 021247 102 ------------------PSEVWQMQFDPKGTTLAVAGGGSASVKLWDTA--TWNLIATLSIPRPEGLKPTDKSSSKKFV 161 (315)
Q Consensus 102 ------------------~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i 161 (315)
...|.+++|+|+++.++++++.|+.|++||+. +++.+..+... .+...|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~-----------~~~~~v 152 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRF-----------CFSKRP 152 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEE-----------ECSSCE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecc-----------cCCCCc
Confidence 22699999999999877889999999999998 77666555311 123458
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEEcccceeee----eecCCccceEEEEEcCC--CCcEEEEEeCCCeEEEEeCCCCee
Q 021247 162 LSVAWSPDGRRIACGSMDGTISVFDVTRAKFLH----HLEGHFMPVRSLVYSPV--DPRVLFSASDDTHVHMYDAEGKSL 235 (315)
Q Consensus 162 ~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~----~~~~~~~~v~~~~~~~~--~~~~l~s~~~d~~i~~wd~~~~~~ 235 (315)
.+++|+|++++|++++.+|.+++|++.+++... .+.+|...|.+++|+|+ ++++|++++.|+.|++||++.++.
T Consensus 153 ~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~ 232 (450)
T 2vdu_B 153 NAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI 232 (450)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC
T ss_pred eEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce
Confidence 999999999999999999999999998776544 67789999999999994 177999999999999999998877
Q ss_pred EEE-eecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccc-------------------------cccceE
Q 021247 236 VTA-MSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN-------------------------HTDQVW 289 (315)
Q Consensus 236 ~~~-~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-------------------------~~~~v~ 289 (315)
+.. +.+|...|.+++|+ ++++|++++.|++|++||+++++.+..+.. ....|.
T Consensus 233 ~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 311 (450)
T 2vdu_B 233 VDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVS 311 (450)
T ss_dssp EEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEE
T ss_pred eeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEE
Confidence 766 56899999999999 999999999999999999998887666542 234689
Q ss_pred EEEEeeCCCEEEEEe-CCCcEEEeec
Q 021247 290 GVSFRPLGGRVVSVS-DDKSISLYEY 314 (315)
Q Consensus 290 ~~~~s~~~~~l~s~~-~d~~i~i~~~ 314 (315)
+++|+|++++|++++ .|+.|+||++
T Consensus 312 ~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 312 KIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp EEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred EEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 999999999999998 8999999997
No 118
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.9e-33 Score=242.62 Aligned_cols=231 Identities=23% Similarity=0.399 Sum_probs=205.1
Q ss_pred cccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcc
Q 021247 57 TGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWN 136 (315)
Q Consensus 57 ~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~ 136 (315)
.+|..+|.++++ ++.++++|+.|+.|++||+.+++.+..+..|...|.+++| +++ ++++|+.|++|++||+.+++
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~-~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DER-VIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSS-EEEEEETTSCEEEEESSSCC
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCC-EEEEEcCCCeEEEEECCCCc
Confidence 456678998887 7899999999999999999999999999999999999999 344 56788999999999999988
Q ss_pred eeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceee---eeecCCccceEEEEEcCCCC
Q 021247 137 LIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFL---HHLEGHFMPVRSLVYSPVDP 213 (315)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~---~~~~~~~~~v~~~~~~~~~~ 213 (315)
.+..+. .|...|.+++|++ +.+++|+.||.|++||+.+++.. ..+.+|...|.++.| ++
T Consensus 205 ~~~~~~-------------~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~~ 266 (435)
T 1p22_A 205 MLNTLI-------------HHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DD 266 (435)
T ss_dssp EEEEEC-------------CCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE---ET
T ss_pred EEEEEc-------------CCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe---CC
Confidence 776663 2344589999974 59999999999999999877654 667889999999998 45
Q ss_pred cEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEE
Q 021247 214 RVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSF 293 (315)
Q Consensus 214 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 293 (315)
.++++++.|+.|++||+++++.+..+.+|...|.++.++ +.++++|+.||.|++||+++++.+.++.+|...|.+++|
T Consensus 267 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 344 (435)
T 1p22_A 267 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 344 (435)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC
T ss_pred CEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe
Confidence 799999999999999999999999999999999999985 679999999999999999999999999999999999999
Q ss_pred eeCCCEEEEEeCCCcEEEeec
Q 021247 294 RPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 294 s~~~~~l~s~~~d~~i~i~~~ 314 (315)
++.+|++++.||+|++||+
T Consensus 345 --~~~~l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 345 --DNKRIVSGAYDGKIKVWDL 363 (435)
T ss_dssp --CSSEEEEEETTSCEEEEEH
T ss_pred --cCCEEEEEeCCCcEEEEEC
Confidence 6789999999999999996
No 119
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.8e-33 Score=232.20 Aligned_cols=248 Identities=25% Similarity=0.397 Sum_probs=204.4
Q ss_pred hccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECC
Q 021247 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90 (315)
Q Consensus 11 ~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~ 90 (315)
.+|...|++++|+|.++ +|++|+.||+|++|+..+.+..+...+|...+.++.. ++.++++++.++.+++|+..
T Consensus 64 ~~~~~~V~~v~~~~~~~----~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~ 137 (318)
T 4ggc_A 64 EQPGEYISSVAWIKEGN----YLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVR 137 (318)
T ss_dssp CSTTCCEEEEEECTTSS----EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred cCCCCeEEEEEECCCCC----EEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecC
Confidence 47888999999999775 7999999999999999999998889999988887665 56799999999999999998
Q ss_pred CCc-eeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCC
Q 021247 91 TNA-SIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169 (315)
Q Consensus 91 ~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 169 (315)
... .+..+..|...+..+.+++.++.+ ++++.|++|++||+++++...... .....+...|..++++|+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~---------~~~~~~~~~v~~~~~~~~ 207 (318)
T 4ggc_A 138 VAEHHVATLSGHSQEVCGLRWAPDGRHL-ASGGNDNLVNVWPSAPGEGGWVPL---------QTFTQHQGAVKAVAWCPW 207 (318)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTSSEE-EEEETTSCEEEEESSCBTTBSCCS---------EEECCCCSCEEEEEECTT
T ss_pred CCceeEEEEcCccCceEEEEEcCCCCEE-EEEecCcceeEEECCCCcccccce---------eeecccCCceEEEEecCC
Confidence 764 456778889999999999998865 678899999999998765332111 111234456889999997
Q ss_pred CCEE---EEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEE-EeCCCeEEEEeCCCCeeEEEeeccccc
Q 021247 170 GRRI---ACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFS-ASDDTHVHMYDAEGKSLVTAMSGHASW 245 (315)
Q Consensus 170 ~~~l---~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s-~~~d~~i~~wd~~~~~~~~~~~~~~~~ 245 (315)
+..+ ++++.++.|++||.+......... +...+..+.|+|.+..++++ ++.|+.|++||.++++.+..+.+|.+.
T Consensus 208 ~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~ 286 (318)
T 4ggc_A 208 QSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR 286 (318)
T ss_dssp STTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC
T ss_pred CCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCC
Confidence 6533 467789999999998777655543 55678999999865554443 347999999999999999999999999
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEEecCcc
Q 021247 246 VLSVDASPDGAAITTGSSDRTVKLWDLNMR 275 (315)
Q Consensus 246 i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 275 (315)
|++++|+|++++|+||+.|++|+|||+...
T Consensus 287 V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 287 VLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 999999999999999999999999998754
No 120
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-34 Score=243.51 Aligned_cols=237 Identities=12% Similarity=0.093 Sum_probs=186.5
Q ss_pred EeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCC
Q 021247 67 AAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRP 146 (315)
Q Consensus 67 ~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 146 (315)
.+.+++.++++|+.||+|++||+.+++.+..+. ...|..+.++|. +++++.|++|++|+......+..+ ...
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~--~~~ 114 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDS--KTN 114 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEET--TTC
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeec--CCc
Confidence 445678899999999999999999998877776 456777788887 678999999999987642211111 110
Q ss_pred CCCCCCccCCCCcceEEEEECC--CCCEEEEecCCCcEEEEEcccceeeeeec-CCccceEEEEEcCCCCcEEEEEeCCC
Q 021247 147 EGLKPTDKSSSKKFVLSVAWSP--DGRRIACGSMDGTISVFDVTRAKFLHHLE-GHFMPVRSLVYSPVDPRVLFSASDDT 223 (315)
Q Consensus 147 ~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~s~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~ 223 (315)
. ........+...|.+++|+| ++++|++++.||.|++||+++++...... .|...+.+++|+| ++.++++|+.|+
T Consensus 115 ~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p-dg~~lasg~~dg 192 (343)
T 3lrv_A 115 K-VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK-DSLLLALYSPDG 192 (343)
T ss_dssp C-EEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECT-TSCEEEEECTTS
T ss_pred c-eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECC-CCCEEEEEcCCC
Confidence 0 00001123445699999999 99999999999999999999888866553 4556899999999 678999999999
Q ss_pred eEEEEeCCCCeeE-EEeec-ccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccc---cccceE--EEEEeeC
Q 021247 224 HVHMYDAEGKSLV-TAMSG-HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN---HTDQVW--GVSFRPL 296 (315)
Q Consensus 224 ~i~~wd~~~~~~~-~~~~~-~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~---~~~~v~--~~~~s~~ 296 (315)
.|++||+++++.+ ..+.. |...|.+++|+|++.+|++++ |+.|++||++..+....+.. |...+. +++|+|+
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (343)
T 3lrv_A 193 ILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDS 271 (343)
T ss_dssp CEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTT
T ss_pred EEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCC
Confidence 9999999988776 67777 999999999999999999999 55999999998876555443 333443 6999999
Q ss_pred CCEEEEEeC-CCcEEEeec
Q 021247 297 GGRVVSVSD-DKSISLYEY 314 (315)
Q Consensus 297 ~~~l~s~~~-d~~i~i~~~ 314 (315)
|++|++++. |+.|+||++
T Consensus 272 g~~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 272 GKNMIAYSNESNSLTIYKF 290 (343)
T ss_dssp SSEEEEEETTTTEEEEEEE
T ss_pred CCEEEEecCCCCcEEEEEE
Confidence 999999998 999999987
No 121
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1e-32 Score=233.94 Aligned_cols=252 Identities=17% Similarity=0.222 Sum_probs=203.4
Q ss_pred EcCCCCcceeeccccccceEEEEeCCC---CCEEEEeeCCCeEEEEECCC-Ccee-EEeeCCcccEEEEEECCCCCeEEE
Q 021247 45 WRPDDMQLERTNTGHCLGVVSVAAHPS---GIIAASASLDSFVRVFDVDT-NASI-ATLEASPSEVWQMQFDPKGTTLAV 119 (315)
Q Consensus 45 w~~~~~~~~~~~~~h~~~v~~~~~~~~---g~~l~s~~~d~~i~~w~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~~~~ 119 (315)
|+....+....+.+|...|.+++|+|+ |.+|++++.|+.|++||+.+ +..+ ..+..|...|.+++|+|+++.+ +
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~ 102 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKV-F 102 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEE-E
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEE-E
Confidence 444555666778899999999999999 69999999999999999997 5444 6778899999999999998865 5
Q ss_pred EecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEE--CCCCCEEEEecCCCcEEEEEcccceeeeeec
Q 021247 120 AGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW--SPDGRRIACGSMDGTISVFDVTRAKFLHHLE 197 (315)
Q Consensus 120 ~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~ 197 (315)
+++.|+.|++||+++.+.+... .+...|.+++| +|++++|++++.|+.|++||+++++.+..+.
T Consensus 103 s~~~dg~v~iwd~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 168 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQAIQIA--------------QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQ 168 (368)
T ss_dssp EEETTSEEEEEETTTTEEEEEE--------------ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEE
T ss_pred EEcCCCcEEEEEcCCCCceeec--------------cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEe
Confidence 7889999999999987765433 24456999999 8999999999999999999999998888887
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEe--ecccccEEEEEEcCCCCe----EEEEeCCCcEEEEe
Q 021247 198 GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAM--SGHASWVLSVDASPDGAA----ITTGSSDRTVKLWD 271 (315)
Q Consensus 198 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~--~~~~~~i~~~~~~~~~~~----l~s~~~d~~i~iwd 271 (315)
.+. .+.++.+.+ ..+++++.++.+.+|+.+........ ..+...+..+.+.++... +++++.|+.|++|+
T Consensus 169 ~~~-~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~ 244 (368)
T 3mmy_A 169 LPE-RCYCADVIY---PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHY 244 (368)
T ss_dssp CSS-CEEEEEEET---TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEE
T ss_pred cCC-CceEEEecC---CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEe
Confidence 665 566666654 37888899999999999875433222 223344555555555444 99999999999999
Q ss_pred cCcc---ceehccccccc------------ceEEEEEeeCCCEEEEEeCCCcEEEeecC
Q 021247 272 LNMR---AAMQSMTNHTD------------QVWGVSFRPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 272 ~~~~---~~~~~~~~~~~------------~v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
++.. .....+..|.. .|++++|+|++++|++++.||.|+|||+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~ 303 (368)
T 3mmy_A 245 INPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKD 303 (368)
T ss_dssp SSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred cCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECC
Confidence 9876 44555666655 79999999999999999999999999963
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=6.9e-32 Score=231.31 Aligned_cols=281 Identities=16% Similarity=0.211 Sum_probs=222.5
Q ss_pred ccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEE-EeeCCCeEEEEECC
Q 021247 12 AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAA-SASLDSFVRVFDVD 90 (315)
Q Consensus 12 ~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~-s~~~d~~i~~w~~~ 90 (315)
.| ..+.+++|+|.+.. ++++++.|+.|++||..+.+....+..+. .+.+++|+|+|.+++ +++.|+.|++||+.
T Consensus 30 ~~-~~~~~~~~s~dg~~---l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~ 104 (391)
T 1l0q_A 30 VG-SNPMGAVISPDGTK---VYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTT 104 (391)
T ss_dssp CS-SSEEEEEECTTSSE---EEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred cC-CCcceEEECCCCCE---EEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECC
Confidence 44 46899999997752 45788899999999998888877766554 899999999999775 55567999999999
Q ss_pred CCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCC
Q 021247 91 TNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDG 170 (315)
Q Consensus 91 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 170 (315)
+++.+..+..+ ..+..++|+|+++.++++++.++.|++||+++++.+..+... ..+..++|+|++
T Consensus 105 ~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~--------------~~~~~~~~~~dg 169 (391)
T 1l0q_A 105 SNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG--------------RSPKGIAVTPDG 169 (391)
T ss_dssp TTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC--------------SSEEEEEECTTS
T ss_pred CCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC--------------CCcceEEECCCC
Confidence 99888777654 468999999999988888899999999999988877666432 126799999999
Q ss_pred CEE-EEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEe---CCCeEEEEeCCCCeeEEEeecccccE
Q 021247 171 RRI-ACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSAS---DDTHVHMYDAEGKSLVTAMSGHASWV 246 (315)
Q Consensus 171 ~~l-~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---~d~~i~~wd~~~~~~~~~~~~~~~~i 246 (315)
+++ ++++.++.|++||+++++....+.. ...+.+++|+|. ++++++++ .++.|++||+++++.+..+..|. .+
T Consensus 170 ~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~-g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~ 246 (391)
T 1l0q_A 170 TKVYVANFDSMSISVIDTVTNSVIDTVKV-EAAPSGIAVNPE-GTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DP 246 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEEC-SSEEEEEEECTT-SSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SE
T ss_pred CEEEEEeCCCCEEEEEECCCCeEEEEEec-CCCccceEECCC-CCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-Cc
Confidence 887 6778899999999999887776654 457889999994 55566555 78999999999988888777665 47
Q ss_pred EEEEEcCCCCeE-EEEeCCCcEEEEecCccceehcccccccceE---------------EEEEeeCC----------CEE
Q 021247 247 LSVDASPDGAAI-TTGSSDRTVKLWDLNMRAAMQSMTNHTDQVW---------------GVSFRPLG----------GRV 300 (315)
Q Consensus 247 ~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~---------------~~~~s~~~----------~~l 300 (315)
.+++|+|+++.+ ++++.|+.|++||+.+++.+..+..|..+.. ...|+.+. -.+
T Consensus 247 ~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~ 326 (391)
T 1l0q_A 247 AGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQF 326 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEE
T ss_pred cEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEE
Confidence 899999999877 6778899999999999888777665543311 12233322 246
Q ss_pred EEEeCCCcEEEeecC
Q 021247 301 VSVSDDKSISLYEYS 315 (315)
Q Consensus 301 ~s~~~d~~i~i~~~~ 315 (315)
...+.|.++++|++.
T Consensus 327 ~~~~~~~~~~~W~~~ 341 (391)
T 1l0q_A 327 TDLSKDATEWKWDFG 341 (391)
T ss_dssp EECCBSCSEEEEECS
T ss_pred EeCCCCceEEEEECC
Confidence 677788999999973
No 123
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.9e-31 Score=221.59 Aligned_cols=211 Identities=22% Similarity=0.360 Sum_probs=176.0
Q ss_pred eeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCC----ceeEEeeCCcccEEEEEECCC--CCeEEEEecCCCeE
Q 021247 54 RTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN----ASIATLEASPSEVWQMQFDPK--GTTLAVAGGGSASV 127 (315)
Q Consensus 54 ~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~----~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i 127 (315)
..+.+|...|.+++|+|++.+|++++.|+.|++||+.++ +....+..|..+|.+++|+|. +. ++++++.|++|
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~-~l~s~~~dg~v 83 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGR-IIASASYDKTV 83 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCS-EEEEEETTSCE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCC-EEEEEcCCCeE
Confidence 456789999999999999999999999999999999876 355667889999999999994 55 55788899999
Q ss_pred EEEecCCcce---------eeeecCCCCCCCCCCccCCCCcceEEEEECCC--CCEEEEecCCCcEEEEEcccceeeeee
Q 021247 128 KLWDTATWNL---------IATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD--GRRIACGSMDGTISVFDVTRAKFLHHL 196 (315)
Q Consensus 128 ~~~d~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~s~dg~i~i~d~~~~~~~~~~ 196 (315)
++||++.++. +..+ ..+...|.+++|+|+ +++|++++.|+.|++||+++++.+..+
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~-------------~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 150 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTL-------------NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSW 150 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEE-------------CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCC
T ss_pred EEEecCCCcccccccCcceeeee-------------cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccc
Confidence 9999987532 2222 234566999999999 999999999999999999877644332
Q ss_pred c-------------CCccceEEEEEcCC--CCcEEEEEeCCCeEEEEeCCCCee--EEEeecccccEEEEEEcCCC----
Q 021247 197 E-------------GHFMPVRSLVYSPV--DPRVLFSASDDTHVHMYDAEGKSL--VTAMSGHASWVLSVDASPDG---- 255 (315)
Q Consensus 197 ~-------------~~~~~v~~~~~~~~--~~~~l~s~~~d~~i~~wd~~~~~~--~~~~~~~~~~i~~~~~~~~~---- 255 (315)
. .|...+.++.|+|. ++.++++++.|+.+.+|+...+.. +..+.+|...|.+++|+|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~ 230 (351)
T 3f3f_A 151 TLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWY 230 (351)
T ss_dssp EEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSS
T ss_pred cccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcc
Confidence 2 57788999999985 478999999999998888877654 66677899999999999998
Q ss_pred CeEEEEeCCCcEEEEecCcccee
Q 021247 256 AAITTGSSDRTVKLWDLNMRAAM 278 (315)
Q Consensus 256 ~~l~s~~~d~~i~iwd~~~~~~~ 278 (315)
++|++++.||.|++||++.+...
T Consensus 231 ~~l~s~~~dg~i~iwd~~~~~~~ 253 (351)
T 3f3f_A 231 QLIATGCKDGRIRIFKITEKLSP 253 (351)
T ss_dssp EEEEEEETTSCEEEEEEEECC--
T ss_pred eEEEEEcCCCeEEEEeCCCCcCc
Confidence 89999999999999999875443
No 124
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=100.00 E-value=2.1e-29 Score=224.17 Aligned_cols=280 Identities=13% Similarity=0.146 Sum_probs=223.8
Q ss_pred eEEEEEeecCCCCCcEEEEeeCCCcEEEEcC--CCCcceeeccccccceEEEEeCC----CCCEEEEee-CCCeEEEEEC
Q 021247 17 VWAVTWVPATETRPALLLTGSLDETVKLWRP--DDMQLERTNTGHCLGVVSVAAHP----SGIIAASAS-LDSFVRVFDV 89 (315)
Q Consensus 17 v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~--~~~~~~~~~~~h~~~v~~~~~~~----~g~~l~s~~-~d~~i~~w~~ 89 (315)
+.+++|+|+++ +|++++.|++|++||. .+.+....+. +...+..+.|+| +|+++++++ .+++|.+||.
T Consensus 181 ~~~v~~spdg~----~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~ 255 (543)
T 1nir_A 181 VHISRMSASGR----YLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDG 255 (543)
T ss_dssp EEEEEECTTSC----EEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEET
T ss_pred cceEEECCCCC----EEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEec
Confidence 88999999876 6999999999999999 6777766665 345679999999 999998887 5899999999
Q ss_pred CCCceeEEeeCC----------c-ccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCC
Q 021247 90 DTNASIATLEAS----------P-SEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSK 158 (315)
Q Consensus 90 ~~~~~~~~~~~~----------~-~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (315)
.+++++.++... + ..+..+.++|++..++++...+++|.+||..+.+.+....++ +.
T Consensus 256 ~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~------------~~ 323 (543)
T 1nir_A 256 ETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG------------AA 323 (543)
T ss_dssp TTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE------------CC
T ss_pred cccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec------------cC
Confidence 999988877642 2 268899999999989899999999999999876544321111 12
Q ss_pred cceEEEEECCCCCEEEE-ecCCCcEEEEEcccceeeeeecC----CccceEEEEEcCCCCcEEEEEe-CCCeEEEEeCCC
Q 021247 159 KFVLSVAWSPDGRRIAC-GSMDGTISVFDVTRAKFLHHLEG----HFMPVRSLVYSPVDPRVLFSAS-DDTHVHMYDAEG 232 (315)
Q Consensus 159 ~~i~~~~~~~~~~~l~~-~s~dg~i~i~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~s~~-~d~~i~~wd~~~ 232 (315)
.++..++|+|+|++|++ +..++.|.+||+.+++.+..+.. |......+ ++|.++.+++++. .|++|.+||..+
T Consensus 324 ~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 324 PFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp SSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred cCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCC
Confidence 23668999999998765 45688999999999998877764 43333333 4675577778776 689999999987
Q ss_pred -------CeeEEEeecccccEEEEEEcCCCCeEEEEe-------CCCcEEEEecCcccee-hcc--------cccccceE
Q 021247 233 -------KSLVTAMSGHASWVLSVDASPDGAAITTGS-------SDRTVKLWDLNMRAAM-QSM--------TNHTDQVW 289 (315)
Q Consensus 233 -------~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~-------~d~~i~iwd~~~~~~~-~~~--------~~~~~~v~ 289 (315)
.+++..+..|...+..+.++|+++.|++++ .+++|.+||+++++.. ..+ ..+...++
T Consensus 403 ~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~ 482 (543)
T 1nir_A 403 KNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVV 482 (543)
T ss_dssp TTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEE
T ss_pred CCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceE
Confidence 788999999988888999999999999987 2679999999987765 332 34567899
Q ss_pred EEEEeeCCCEEEEE-----eCCCcEEEeec
Q 021247 290 GVSFRPLGGRVVSV-----SDDKSISLYEY 314 (315)
Q Consensus 290 ~~~~s~~~~~l~s~-----~~d~~i~i~~~ 314 (315)
.+.|+|+|+.|+.. +.|++|.|||.
T Consensus 483 ~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~ 512 (543)
T 1nir_A 483 QPEYNKRGDEVWFSVWNGKNDSSALVVVDD 512 (543)
T ss_dssp EEEECSSSSEEEEEEECCTTSCCEEEEEET
T ss_pred eccCCCCCCEEEEEeecCCCCCCeEEEEEC
Confidence 99999999998754 24799999985
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.98 E-value=1.9e-30 Score=212.35 Aligned_cols=244 Identities=13% Similarity=0.097 Sum_probs=171.1
Q ss_pred hhccccceEEEEEeecCCCCCcEEEEee-CC-CcEEEE--cCCCC--cceeeccccccceEEEEeCCCCCEEEEee--CC
Q 021247 10 ENAHEESVWAVTWVPATETRPALLLTGS-LD-ETVKLW--RPDDM--QLERTNTGHCLGVVSVAAHPSGIIAASAS--LD 81 (315)
Q Consensus 10 ~~~h~~~v~~v~~~~~~~~~~~~l~sgs-~d-~~v~~w--~~~~~--~~~~~~~~h~~~v~~~~~~~~g~~l~s~~--~d 81 (315)
...|+.+|..|.+.|+..+ .+.++=+ .. +.|+.. .+++. +......+|...+..+ ++|+++.+++ .|
T Consensus 82 ~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d 156 (356)
T 2w18_A 82 WHFAEVPVLQIVPVPDVYN--LVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSD 156 (356)
T ss_dssp EECCSSCEEEECCCTTCCS--CEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTT
T ss_pred EeccCceeEEEEEcCcccc--eeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEecccCCC
Confidence 4578888999998886543 1222211 11 112221 22211 1111223455555554 5676666643 59
Q ss_pred CeEEEEEC-CCCceeEEeeCCcccEEEEEECC---CCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCC
Q 021247 82 SFVRVFDV-DTNASIATLEASPSEVWQMQFDP---KGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSS 157 (315)
Q Consensus 82 ~~i~~w~~-~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (315)
+.|++|++ .+++.+..+..|...+..++|+| ++. ++++++.|++|++||+++++.+.++..+.. +
T Consensus 157 ~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~-~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~----------~ 225 (356)
T 2w18_A 157 QQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQE-ALLGTTIMNNIVIWNLKTGQLLKKMHIDDS----------Y 225 (356)
T ss_dssp CEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTT-EEEEEETTSEEEEEETTTCCEEEEEECCC------------
T ss_pred CcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCc-eEEEecCCCcEEEEECCCCcEEEEEcCCCc----------c
Confidence 99999999 44777778888888888888888 444 668899999999999999999888753211 1
Q ss_pred CcceEEEEECCCCCEE------------EEecCCCcEEEEEcccceeeeee-----cCCccceEEEEEcCCCCcEEEEEe
Q 021247 158 KKFVLSVAWSPDGRRI------------ACGSMDGTISVFDVTRAKFLHHL-----EGHFMPVRSLVYSPVDPRVLFSAS 220 (315)
Q Consensus 158 ~~~i~~~~~~~~~~~l------------~~~s~dg~i~i~d~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~l~s~~ 220 (315)
...+.+++|+|+|.++ ++|+.|++|++||+.+++.+..+ .+|...+.+..++ +.++++++
T Consensus 226 v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s---g~~lASgS 302 (356)
T 2w18_A 226 QASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK---DHCAAAIL 302 (356)
T ss_dssp -CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE---TTEEEEEE
T ss_pred eeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC---CCEEEEEc
Confidence 2247788999999876 56788999999999999877654 3665555444443 56899999
Q ss_pred CCCeEEEEeCCCCeeEEEeecccccEE-EEEEcCCCCeEEEEeCCCcEEEEec
Q 021247 221 DDTHVHMYDAEGKSLVTAMSGHASWVL-SVDASPDGAAITTGSSDRTVKLWDL 272 (315)
Q Consensus 221 ~d~~i~~wd~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~s~~~d~~i~iwd~ 272 (315)
.|++|++||+++++++..+.+|...+. .++|+|+|++|++|+.|++|+|||+
T Consensus 303 ~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 303 TSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 999999999999999999999987655 5899999999999999999999985
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.98 E-value=3.6e-30 Score=222.36 Aligned_cols=278 Identities=18% Similarity=0.158 Sum_probs=208.5
Q ss_pred ccceEEEEEeecCCCCCcEEEEee----CCC----cEEEEcC--CCCcce--eeccccccceEEEEeCC-----------
Q 021247 14 EESVWAVTWVPATETRPALLLTGS----LDE----TVKLWRP--DDMQLE--RTNTGHCLGVVSVAAHP----------- 70 (315)
Q Consensus 14 ~~~v~~v~~~~~~~~~~~~l~sgs----~d~----~v~~w~~--~~~~~~--~~~~~h~~~v~~~~~~~----------- 70 (315)
...++..+|.+.+. .++++|+ .|| .|++||. .+.+.. ..+.+|...+..+++++
T Consensus 62 ~~~~~~~~w~~~g~---~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~ 138 (415)
T 2hqs_A 62 AQEVQPAAWSALGI---DAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGI 138 (415)
T ss_dssp GGGCCHHHHHTTTC---CEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSS
T ss_pred ccCcCHHHHHhcCC---CEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCC
Confidence 34677777877654 3677887 467 8999999 777755 44677777666665543
Q ss_pred ---CCCEEEEeeCC------CeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCC--CeEEEEecCCcceee
Q 021247 71 ---SGIIAASASLD------SFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGS--ASVKLWDTATWNLIA 139 (315)
Q Consensus 71 ---~g~~l~s~~~d------~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d--~~i~~~d~~~~~~~~ 139 (315)
.+..++.++.+ +.|++||+.. .....+..+...+.+++|+|+++.+++++..+ ..|++||+.+++...
T Consensus 139 ~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~ 217 (415)
T 2hqs_A 139 KGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ 217 (415)
T ss_dssp CCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE
T ss_pred CCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE
Confidence 25566655554 7999999975 44566677888999999999999876654332 499999998876543
Q ss_pred eecCCCCCCCCCCccCCCCcceEEEEECCCCCEEE-EecCCCc--EEEEEcccceeeeeecCCccceEEEEEcCCCCcEE
Q 021247 140 TLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIA-CGSMDGT--ISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVL 216 (315)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~s~dg~--i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 216 (315)
.. .+...+.+++|+|+|++|+ +++.++. |++||+.+++. ..+..|...+.++.|+| +++.|
T Consensus 218 l~--------------~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~sp-dg~~l 281 (415)
T 2hqs_A 218 VA--------------SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFP-DSQNL 281 (415)
T ss_dssp EE--------------CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECT-TSSEE
T ss_pred ee--------------cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECC-CCCEE
Confidence 22 1223488999999999887 6666654 99999988765 56677888899999999 55666
Q ss_pred EEEeC-CC--eEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCC---CcEEEEecCccceehcccccccceEE
Q 021247 217 FSASD-DT--HVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD---RTVKLWDLNMRAAMQSMTNHTDQVWG 290 (315)
Q Consensus 217 ~s~~~-d~--~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~v~~ 290 (315)
+.++. ++ .|++||..+++. ..+..+...+.+++|+|+|++|++++.+ ..|++||+.+++.. .+..+. .+.+
T Consensus 282 ~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~ 358 (415)
T 2hqs_A 282 AFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDET 358 (415)
T ss_dssp EEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEE
T ss_pred EEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCC
Confidence 65554 45 688889887764 3445567788999999999999888764 58999999987653 344554 8899
Q ss_pred EEEeeCCCEEEEEeCCC---cEEEeec
Q 021247 291 VSFRPLGGRVVSVSDDK---SISLYEY 314 (315)
Q Consensus 291 ~~~s~~~~~l~s~~~d~---~i~i~~~ 314 (315)
++|+|+|++|++++.++ .|.+||+
T Consensus 359 ~~~spdg~~l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 359 PSLAPNGTMVIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp EEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred eEEcCCCCEEEEEEcCCCccEEEEEEC
Confidence 99999999999888877 7888886
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=8.6e-29 Score=214.88 Aligned_cols=244 Identities=14% Similarity=0.144 Sum_probs=200.9
Q ss_pred hhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEE-EeeCCCeEEEE
Q 021247 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAA-SASLDSFVRVF 87 (315)
Q Consensus 9 ~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~-s~~~d~~i~~w 87 (315)
...+|...|++++|.|.+. ++++++.|+.|++|+.++.+....+..|...+.+++++|++..++ +++.|+.|++|
T Consensus 164 ~~~~~~~~v~~~~~~~~~~----~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~ 239 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNE----LWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVI 239 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTE----EEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cccccCCceeEEEEcCCCE----EEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEE
Confidence 3468999999999987654 799999999999999998888888888889999999999998775 55589999999
Q ss_pred ECCCCceeEEeeCCcccEEEEEECCCCCeEEEEec-------CCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcc
Q 021247 88 DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGG-------GSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKF 160 (315)
Q Consensus 88 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (315)
|+.+++.+..+..+ ..+..++|+|+++.+++++. .|+.|++||+++++.+..+.. ...
T Consensus 240 d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~--------------~~~ 304 (433)
T 3bws_A 240 DRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP--------------PGN 304 (433)
T ss_dssp ETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE--------------EEC
T ss_pred ECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC--------------CCC
Confidence 99998887777654 45899999999987766553 578999999998776655421 123
Q ss_pred eEEEEECCCCCEE-EEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeC---------------CCe
Q 021247 161 VLSVAWSPDGRRI-ACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASD---------------DTH 224 (315)
Q Consensus 161 i~~~~~~~~~~~l-~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~---------------d~~ 224 (315)
+.+++|+|+++.+ ++++.++.|++||+.+++....+. +...+.+++|+| +++++++++. ||.
T Consensus 305 ~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~g~~dg~ 382 (433)
T 3bws_A 305 KRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSP-DGKYLYVSCRGPNHPTEGYLKKGLVLGK 382 (433)
T ss_dssp EEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECT-TSSEEEEEECCCCCTTTCTTSCCSSCCE
T ss_pred cceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcC-CCCEEEEEecCCCccccccccccccceE
Confidence 7789999999755 667899999999999888877765 566789999999 4556666554 579
Q ss_pred EEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeC-CCcEEEEecCc
Q 021247 225 VHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSS-DRTVKLWDLNM 274 (315)
Q Consensus 225 i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~-d~~i~iwd~~~ 274 (315)
|++||..+++.+..+.. ...+.+++|+|++++|++++. |+.|++|+++.
T Consensus 383 v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 383 VYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 99999999888877765 457899999999999988875 99999999863
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=1.2e-28 Score=219.20 Aligned_cols=278 Identities=12% Similarity=0.103 Sum_probs=217.2
Q ss_pred cEEEEeeCCCcEEEEcCCCCcceeecc-ccccceEEEEeCCCCCEEEEeeCCCeEEEEEC--CCCceeEEeeCCcccEEE
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLERTNT-GHCLGVVSVAAHPSGIIAASASLDSFVRVFDV--DTNASIATLEASPSEVWQ 107 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~~~~~-~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~--~~~~~~~~~~~~~~~v~~ 107 (315)
.++++++.|++|.+||..+.++...+. ++. +..+.++|+|+++++++.|++|++||+ .+++.+.++.. ...+..
T Consensus 150 ~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~ 226 (543)
T 1nir_A 150 LFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARS 226 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEE
T ss_pred EEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcce
Confidence 378889999999999999998887776 443 889999999999999999999999999 78888888875 445789
Q ss_pred EEECC----CCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCE-EEEecCCCcE
Q 021247 108 MQFDP----KGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRR-IACGSMDGTI 182 (315)
Q Consensus 108 ~~~~~----~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~s~dg~i 182 (315)
++|+| +++.+++++..+++|.+||..+++.+..+....... . .........+..+.++|++.. +++...++.|
T Consensus 227 va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~-~-~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i 304 (543)
T 1nir_A 227 VESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTV-D-TQTYHPEPRVAAIIASHEHPEFIVNVKETGKV 304 (543)
T ss_dssp EEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECS-S-SCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred EEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCccc-C-ccccccCCceEEEEECCCCCEEEEEECCCCeE
Confidence 99999 999887777678999999999998888775432100 0 000011235889999997665 5677889999
Q ss_pred EEEEcccceeee--eecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeec----ccccEEEEEEcCC-C
Q 021247 183 SVFDVTRAKFLH--HLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSG----HASWVLSVDASPD-G 255 (315)
Q Consensus 183 ~i~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~----~~~~i~~~~~~~~-~ 255 (315)
.+||+.+.+.+. .+. +...+..+.|+|++..+++++..+++|.+||.++++++..+.. |.+....+ ++|+ +
T Consensus 305 ~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g 382 (543)
T 1nir_A 305 LLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYG 382 (543)
T ss_dssp EEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTE
T ss_pred EEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCc
Confidence 999998755433 332 4456778999995544555666789999999999988887763 65444343 4676 6
Q ss_pred CeEEEEe-CCCcEEEEecCc-------cceehcccccccceEEEEEeeCCCEEEEEe-------CCCcEEEeecC
Q 021247 256 AAITTGS-SDRTVKLWDLNM-------RAAMQSMTNHTDQVWGVSFRPLGGRVVSVS-------DDKSISLYEYS 315 (315)
Q Consensus 256 ~~l~s~~-~d~~i~iwd~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-------~d~~i~i~~~~ 315 (315)
.+++++. .|++|++||+.. ++.++++..|...+..+++||+|++|++.+ .+++|.|||..
T Consensus 383 ~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~ 457 (543)
T 1nir_A 383 PVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLK 457 (543)
T ss_dssp EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETT
T ss_pred cEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECC
Confidence 6777776 689999999988 788899999988888999999999999887 37899999963
No 129
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1e-30 Score=224.44 Aligned_cols=230 Identities=14% Similarity=0.101 Sum_probs=154.8
Q ss_pred hhhhccccceEEEEEeecCCC----CCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCC-CEEEEeeCCC
Q 021247 8 SVENAHEESVWAVTWVPATET----RPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG-IIAASASLDS 82 (315)
Q Consensus 8 ~~~~~h~~~v~~v~~~~~~~~----~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g-~~l~s~~~d~ 82 (315)
..+.+|++.|++|+|+|.... ...+|+|||.|++|++||..+........+|..++.+++|+|++ .+|++++.|+
T Consensus 130 ~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~ 209 (393)
T 4gq1_A 130 GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNG 209 (393)
T ss_dssp CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTS
T ss_pred cccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCC
Confidence 346899999999999984211 12489999999999999988777667777889999999999987 5899999999
Q ss_pred eEEEEECCCCceeEEeeCCccc----EEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCC
Q 021247 83 FVRVFDVDTNASIATLEASPSE----VWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSK 158 (315)
Q Consensus 83 ~i~~w~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (315)
+|++||+.+++.......+... +......+... ......+.
T Consensus 210 ~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~-----------------------------------~~~~~~~~ 254 (393)
T 4gq1_A 210 NIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVN-----------------------------------TCHSSGIA 254 (393)
T ss_dssp EEEEEETTCCC----------CSCCCSEEEESGGGC-----------------------------------------CCS
T ss_pred EEEEEECCCCcccccccccCCcccceEEeccccccee-----------------------------------eeeccccc
Confidence 9999999988765444322211 11111110000 00011234
Q ss_pred cceEEEEEC-CCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEE------------------EEcCC-CCcEEEE
Q 021247 159 KFVLSVAWS-PDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSL------------------VYSPV-DPRVLFS 218 (315)
Q Consensus 159 ~~i~~~~~~-~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~------------------~~~~~-~~~~l~s 218 (315)
..+.++.|+ ++++.|++++.|+.+++||+..++....+..|...+..+ .|+|. +..++++
T Consensus 255 ~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 334 (393)
T 4gq1_A 255 SSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATA 334 (393)
T ss_dssp SSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEE
T ss_pred ccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEE
Confidence 457788886 799999999999999999998776655554444333322 23333 4446778
Q ss_pred EeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecC
Q 021247 219 ASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLN 273 (315)
Q Consensus 219 ~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~ 273 (315)
|+.|+.|++||...+.......+|..+|.+++|+|+|++||+++.+| +.+|.+.
T Consensus 335 gs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 335 HSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp ETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred ECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 88999999999998888888888999999999999999999998776 6666653
No 130
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.97 E-value=5.1e-28 Score=202.63 Aligned_cols=268 Identities=10% Similarity=0.113 Sum_probs=197.8
Q ss_pred cEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeC-CCeEEEEECCCCce-eEEeeCCcccEEEE
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASL-DSFVRVFDVDTNAS-IATLEASPSEVWQM 108 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~-d~~i~~w~~~~~~~-~~~~~~~~~~v~~~ 108 (315)
.++++++.++.|++||.++.+.......+...+ .+.++|+|+++++++. ++.|++||+.+++. ...+..+..+..++
T Consensus 11 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 89 (331)
T 3u4y_A 11 FGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADV 89 (331)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCE
T ss_pred EEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccce
Confidence 468888999999999999888877766555666 9999999986665554 89999999999887 66666666666559
Q ss_pred EECCCCCeEEEEecCC-C--eEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEE-ecCCCc-EE
Q 021247 109 QFDPKGTTLAVAGGGS-A--SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIAC-GSMDGT-IS 183 (315)
Q Consensus 109 ~~~~~~~~~~~~~~~d-~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~s~dg~-i~ 183 (315)
+|+|+++.++ ++..+ + .|.+||+.+++.+..+... .....++|+|+|+++++ +..++. +.
T Consensus 90 ~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~~--------------~~~~~~~~spdg~~l~~~~~~~~~~i~ 154 (331)
T 3u4y_A 90 DITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPIP--------------YDAVGIAISPNGNGLILIDRSSANTVR 154 (331)
T ss_dssp EECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEECC--------------TTEEEEEECTTSSCEEEEEETTTTEEE
T ss_pred EECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEEECC--------------CCccceEECCCCCEEEEEecCCCceEE
Confidence 9999999877 44444 3 9999999988877665321 12579999999986654 456678 99
Q ss_pred EEEcccceee----eeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCee---EEEeecccccEEEEEEcCCCC
Q 021247 184 VFDVTRAKFL----HHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSL---VTAMSGHASWVLSVDASPDGA 256 (315)
Q Consensus 184 i~d~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~---~~~~~~~~~~i~~~~~~~~~~ 256 (315)
+|++.....+ .........+..+.|+|++..+++++..++.|.+||+++++. +..+.. ...+..++|+|+|+
T Consensus 155 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~ 233 (331)
T 3u4y_A 155 RFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGS 233 (331)
T ss_dssp EEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSS
T ss_pred EEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCC
Confidence 9998643222 111223345789999995544666777899999999988877 666654 35677899999999
Q ss_pred eEEEE-eCCCcEEEEecCccce--ehccccc----cc---ceEEEEEeeCCCEEEEEe-CCCcEEEeecC
Q 021247 257 AITTG-SSDRTVKLWDLNMRAA--MQSMTNH----TD---QVWGVSFRPLGGRVVSVS-DDKSISLYEYS 315 (315)
Q Consensus 257 ~l~s~-~~d~~i~iwd~~~~~~--~~~~~~~----~~---~v~~~~~s~~~~~l~s~~-~d~~i~i~~~~ 315 (315)
+++.+ ..++.|.+||+.+++. +..+..+ .. ....++|+|+|++|+.++ .+++|.+||+.
T Consensus 234 ~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~ 303 (331)
T 3u4y_A 234 TVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTIS 303 (331)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred EEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEec
Confidence 76554 4578899999988765 3222211 22 234589999999886554 56799999974
No 131
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.97 E-value=8.8e-28 Score=201.76 Aligned_cols=267 Identities=13% Similarity=0.210 Sum_probs=189.8
Q ss_pred EEEEeeCCCcEEEEcCCC-Ccce-eeccccccceEEEEeCCCCCEEEEeeCC-CeEEEEECC--CCc--eeEEeeCCccc
Q 021247 32 LLLTGSLDETVKLWRPDD-MQLE-RTNTGHCLGVVSVAAHPSGIIAASASLD-SFVRVFDVD--TNA--SIATLEASPSE 104 (315)
Q Consensus 32 ~l~sgs~d~~v~~w~~~~-~~~~-~~~~~h~~~v~~~~~~~~g~~l~s~~~d-~~i~~w~~~--~~~--~~~~~~~~~~~ 104 (315)
++++++.|+.|++|+.+. .+.. .....|...+..++++|+|.++++++.+ +.|++|++. ++. .+..+.... .
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~ 85 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-S 85 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-C
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-C
Confidence 455557899999998853 2221 1223466678899999999988888876 999999998 444 233444333 6
Q ss_pred EEEEEECCCCCeEEEEecCCCeEEEEecC---CcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEec-CCC
Q 021247 105 VWQMQFDPKGTTLAVAGGGSASVKLWDTA---TWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS-MDG 180 (315)
Q Consensus 105 v~~~~~~~~~~~~~~~~~~d~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s-~dg 180 (315)
+..++|+|+++.+++++..++.|.+||+. ..+....+.. ...+.+++|+|+++++++++ .++
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--------------~~~~~~~~~s~dg~~l~~~~~~~~ 151 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG--------------LDGCHSANISPDNRTLWVPALKQD 151 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC--------------CTTBCCCEECTTSSEEEEEEGGGT
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC--------------CCCceEEEECCCCCEEEEecCCCC
Confidence 78899999999888887778999999994 3333333211 11267899999999887766 889
Q ss_pred cEEEEEccc-ceeee----eecC-CccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCC--Cee--EEEee----cc--cc
Q 021247 181 TISVFDVTR-AKFLH----HLEG-HFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG--KSL--VTAMS----GH--AS 244 (315)
Q Consensus 181 ~i~i~d~~~-~~~~~----~~~~-~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~--~~~--~~~~~----~~--~~ 244 (315)
.|.+||+.+ ++... .... ....+..+.|+|++..+++++..++.|.+|++.. ++. ..... ++ ..
T Consensus 152 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 231 (343)
T 1ri6_A 152 RICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTR 231 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCC
T ss_pred EEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccC
Confidence 999999987 54432 2222 2346788999995544556666899999999853 332 22222 11 23
Q ss_pred cEEEEEEcCCCCeEE-EEeCCCcEEEEecC----ccceehcccccccceEEEEEeeCCCEEEEEe-CCCcEEEeec
Q 021247 245 WVLSVDASPDGAAIT-TGSSDRTVKLWDLN----MRAAMQSMTNHTDQVWGVSFRPLGGRVVSVS-DDKSISLYEY 314 (315)
Q Consensus 245 ~i~~~~~~~~~~~l~-s~~~d~~i~iwd~~----~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~d~~i~i~~~ 314 (315)
.+..++|+|++++|+ ++..++.|++|++. ..+.+..+..+.. +.+++|+|+|++|++++ .++.|.+|++
T Consensus 232 ~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~ 306 (343)
T 1ri6_A 232 WAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEI 306 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEE
T ss_pred CccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEE
Confidence 577899999998776 55579999999998 2334444444443 88999999999888777 6899999964
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=3.1e-27 Score=204.01 Aligned_cols=246 Identities=15% Similarity=0.137 Sum_probs=192.0
Q ss_pred EEEEeeCC------CcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCC---eEEEEECCCCceeEEeeCCc
Q 021247 32 LLLTGSLD------ETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDS---FVRVFDVDTNASIATLEASP 102 (315)
Q Consensus 32 ~l~sgs~d------~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~---~i~~w~~~~~~~~~~~~~~~ 102 (315)
.++.++.+ +.|++||.+. ...+.+.+|...+.+++|+|+|++|++++.|+ .|++||+.+++.. .+..+.
T Consensus 145 ~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~ 222 (415)
T 2hqs_A 145 RIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFP 222 (415)
T ss_dssp EEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCS
T ss_pred EEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCC
Confidence 45555543 7999999874 34566677889999999999999999999885 9999999988765 455677
Q ss_pred ccEEEEEECCCCCeEEEEecCCC--eEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecC-C
Q 021247 103 SEVWQMQFDPKGTTLAVAGGGSA--SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSM-D 179 (315)
Q Consensus 103 ~~v~~~~~~~~~~~~~~~~~~d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~-d 179 (315)
..+..++|+|+++.++++++.++ .|++||+++++.. .+. .+...+.+++|+|+|++|+.++. +
T Consensus 223 ~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l~-------------~~~~~~~~~~~spdg~~l~~~s~~~ 288 (415)
T 2hqs_A 223 RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVT-------------DGRSNNTEPTWFPDSQNLAFTSDQA 288 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECC-------------CCSSCEEEEEECTTSSEEEEEECTT
T ss_pred CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eCc-------------CCCCcccceEECCCCCEEEEEECCC
Confidence 78999999999998887776654 5999999876542 221 12345889999999999988775 4
Q ss_pred C--cEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCC---CeEEEEeCCCCeeEEEeecccccEEEEEEcCC
Q 021247 180 G--TISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD---THVHMYDAEGKSLVTAMSGHASWVLSVDASPD 254 (315)
Q Consensus 180 g--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~ 254 (315)
+ .|++||+.+++. ..+..+...+..+.|+| ++++|+.++.+ ..|++||..+++.. .+..+. .+.+++|+|+
T Consensus 289 g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~sp-dG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spd 364 (415)
T 2hqs_A 289 GRPQVYKVNINGGAP-QRITWEGSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPN 364 (415)
T ss_dssp SSCEEEEEETTSSCC-EECCCSSSEEEEEEECT-TSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTT
T ss_pred CCcEEEEEECCCCCE-EEEecCCCcccCeEECC-CCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCC
Confidence 4 688889887763 34555667888999999 55666665543 58999999987664 455554 7899999999
Q ss_pred CCeEEEEeCCC---cEEEEecCccceehcccccccceEEEEEeeCCC
Q 021247 255 GAAITTGSSDR---TVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGG 298 (315)
Q Consensus 255 ~~~l~s~~~d~---~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~ 298 (315)
|++|++++.++ .|++||+. +.....+..|.+.|++++|+|--+
T Consensus 365 g~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 365 GTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp SSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred CCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence 99999888877 79999997 455667888999999999999754
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=1.2e-27 Score=221.37 Aligned_cols=286 Identities=11% Similarity=0.055 Sum_probs=211.3
Q ss_pred ccceEEEEEeecCCCCCcEEEEeeC-CC-----cEEEEcCCCCcceeeccccc------------------------cce
Q 021247 14 EESVWAVTWVPATETRPALLLTGSL-DE-----TVKLWRPDDMQLERTNTGHC------------------------LGV 63 (315)
Q Consensus 14 ~~~v~~v~~~~~~~~~~~~l~sgs~-d~-----~v~~w~~~~~~~~~~~~~h~------------------------~~v 63 (315)
...|..++|+|++. .|++++. |+ .|++|+.++.+.......+. ..+
T Consensus 36 ~~~~~~~~~SpdG~----~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 111 (741)
T 2ecf_A 36 GPTLMKPKVAPDGS----RVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGI 111 (741)
T ss_dssp CCCCEEEEECTTSS----EEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEES
T ss_pred CCCCCCceEecCCC----EEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCc
Confidence 45799999999886 6888888 88 89999998887665554443 237
Q ss_pred EEEEeCCCCCEEEEeeCCCeEEEEECCCCc--eeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeee
Q 021247 64 VSVAAHPSGIIAASASLDSFVRVFDVDTNA--SIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL 141 (315)
Q Consensus 64 ~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~ 141 (315)
.+++|+|+|++|++++. +.|++||+.++. ....+..+...+..++|+|+|+.++++. ++.|.+||+.+++.....
T Consensus 112 ~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~--~~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 112 VDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR--GRNLWVIDLASGRQMQLT 188 (741)
T ss_dssp CCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE--TTEEEEEETTTTEEEECC
T ss_pred ceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe--CCcEEEEecCCCCEEEec
Confidence 89999999999998886 899999999873 3444556677899999999999876654 469999999886654332
Q ss_pred cCCCCCCCCCCccCCC--------CcceEEEEECCCCCEEEEecCCC---------------------------------
Q 021247 142 SIPRPEGLKPTDKSSS--------KKFVLSVAWSPDGRRIACGSMDG--------------------------------- 180 (315)
Q Consensus 142 ~~~~~~~~~~~~~~~~--------~~~i~~~~~~~~~~~l~~~s~dg--------------------------------- 180 (315)
...... ..... ...+..++|+|||++|+.++.|+
T Consensus 189 ~~~~~~-----~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~ 263 (741)
T 2ecf_A 189 ADGSTT-----IGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQV 263 (741)
T ss_dssp CCCCSS-----EEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEE
T ss_pred cCCccc-----eeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCee
Confidence 211000 00000 01146799999999999887665
Q ss_pred cEEEEEccc-ceeeeeec--CCccceEEEEEcCCCCcEEEEEe-----CCCeEEEEeCCCCeeEEEeecccc----cEEE
Q 021247 181 TISVFDVTR-AKFLHHLE--GHFMPVRSLVYSPVDPRVLFSAS-----DDTHVHMYDAEGKSLVTAMSGHAS----WVLS 248 (315)
Q Consensus 181 ~i~i~d~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~-----~d~~i~~wd~~~~~~~~~~~~~~~----~i~~ 248 (315)
.|++||+.+ ++...... .|...+..+.| |+ ++.|+.++ .+..|++||..+++....+..+.. .+..
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pD-g~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~ 341 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RD-PQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNS 341 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EE-TTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSC
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CC-CCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCc
Confidence 789999988 76544332 46778999999 84 55555443 357899999998877666655442 3457
Q ss_pred EEEcCCCCeEEEEeCCCcEEEEecC-ccceehcccccccceEEE-EEeeCCCEEEE-EeCCC--cEEEeec
Q 021247 249 VDASPDGAAITTGSSDRTVKLWDLN-MRAAMQSMTNHTDQVWGV-SFRPLGGRVVS-VSDDK--SISLYEY 314 (315)
Q Consensus 249 ~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~~~~~~v~~~-~~s~~~~~l~s-~~~d~--~i~i~~~ 314 (315)
++|+|+|+++++++.|+.++||.++ .+. ...+..|...+.++ .|+|+|+.|+. ++.++ +++||++
T Consensus 342 ~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~ 411 (741)
T 2ecf_A 342 LRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAV 411 (741)
T ss_dssp CEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEE
T ss_pred eEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEE
Confidence 8999999999999999988888765 334 66677777788887 59999998864 45555 8999975
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.96 E-value=2.5e-26 Score=193.80 Aligned_cols=274 Identities=13% Similarity=0.160 Sum_probs=210.7
Q ss_pred ccccceEEEEEeecCCCCCcEEEEeeC-------CCcEEEEcCCCCcceeeccccccceEEEEeCCCCCE-EEEeeCCCe
Q 021247 12 AHEESVWAVTWVPATETRPALLLTGSL-------DETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGII-AASASLDSF 83 (315)
Q Consensus 12 ~h~~~v~~v~~~~~~~~~~~~l~sgs~-------d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~-l~s~~~d~~ 83 (315)
.....+..++|+|+++ .+++++. ++.|.+||..+.+....+.. ...+..+.++|+|++ +++...++.
T Consensus 38 ~~~~~~~~~~~s~dg~----~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~ 112 (353)
T 3vgz_A 38 AVGKGAYEMAYSQQEN----ALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSA 112 (353)
T ss_dssp EEESSEEEEEEETTTT----EEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTE
T ss_pred hhccCccceEECCCCC----EEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCE
Confidence 3455788999999765 4566553 56899999988887666543 234678899999984 455666899
Q ss_pred EEEEECCCCceeEEeeCCcc---------cEEEEEECCCCCeEEEEe-cCCCeEEEEecCCcceeeeecCCCCCCCCCCc
Q 021247 84 VRVFDVDTNASIATLEASPS---------EVWQMQFDPKGTTLAVAG-GGSASVKLWDTATWNLIATLSIPRPEGLKPTD 153 (315)
Q Consensus 84 i~~w~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~~~~~-~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 153 (315)
|.+||..+++.+..+..+.. .+..+.|+|+++.+++++ +.++.|.+||..+++.+..+....
T Consensus 113 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-------- 184 (353)
T 3vgz_A 113 VTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTG-------- 184 (353)
T ss_dssp EEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCC--------
T ss_pred EEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCC--------
Confidence 99999999988777765432 268899999999887776 458899999999888776664211
Q ss_pred cCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecC----CccceEEEEEcCCCCcEEEEEeCCCeEEEEe
Q 021247 154 KSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEG----HFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229 (315)
Q Consensus 154 ~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd 229 (315)
..+..++|+|++++++++..++.+.+||+.+++....+.. +...+..++|+|++..++++...++.|.+||
T Consensus 185 -----~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 259 (353)
T 3vgz_A 185 -----KMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVD 259 (353)
T ss_dssp -----TTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEE
T ss_pred -----CccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 1255789999999999999999999999999888766653 4556788999996555666666679999999
Q ss_pred CCCCeeEEEeecccccEEEEEEcCCCCeEEEEe-CCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCC
Q 021247 230 AEGKSLVTAMSGHASWVLSVDASPDGAAITTGS-SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDD 306 (315)
Q Consensus 230 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 306 (315)
.++++.+..+.... ...++|+|+++.++.++ .++.|.+||+.+++.+..+... ..+.+++|+|+|++|+.+..+
T Consensus 260 ~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 260 TRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp TTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEEC
T ss_pred CCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEcc
Confidence 99888777666433 25689999998655444 7899999999988887776543 477899999999977655544
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.96 E-value=2.9e-27 Score=194.15 Aligned_cols=257 Identities=14% Similarity=0.148 Sum_probs=189.7
Q ss_pred EEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCC-CceeEEeeCC-cccEEEEEEC
Q 021247 34 LTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT-NASIATLEAS-PSEVWQMQFD 111 (315)
Q Consensus 34 ~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~-~~~~~~~~~~-~~~v~~~~~~ 111 (315)
.+++.|+.|++|+..+.+.. .+..|...+.++.|+|+|.++++++ ++.|++||+.+ ++.......+ ...+..++|+
T Consensus 16 ~~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 16 PGGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp --CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC
T ss_pred CCCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEEC
Confidence 34567899999999877654 4456888999999999999999876 88999999998 7766555444 3667889999
Q ss_pred CCCCeEEEEec-CCCeEEE--EecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEE-EecCCCcEEEEEc
Q 021247 112 PKGTTLAVAGG-GSASVKL--WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIA-CGSMDGTISVFDV 187 (315)
Q Consensus 112 ~~~~~~~~~~~-~d~~i~~--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~s~dg~i~i~d~ 187 (315)
|+++.+++++. .++...+ ++..+.+. ..+. ....+..++|+|++++|+ ++..++.+.+|++
T Consensus 94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~--------------~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~ 158 (297)
T 2ojh_A 94 PDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMT--------------KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSM 158 (297)
T ss_dssp TTSSEEEEEECTTTSSCEEEEEETTCCCC-EECC--------------SSSSEEEEEECTTSSEEEEEEEETTEEEEEEE
T ss_pred CCCCEEEEEEeCCCCcceEEEEECCCCce-EEee--------------cCCCccceEECCCCCEEEEEECCCCceEEEEE
Confidence 99998766552 2334444 45444321 1111 111277899999999887 7778999999986
Q ss_pred cc-ceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCC-CCeeEEEeecccccEEEEEEcCCCCeEEEEeCC-
Q 021247 188 TR-AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSVDASPDGAAITTGSSD- 264 (315)
Q Consensus 188 ~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d- 264 (315)
.. ......+..+...+.++.|+|++..+++++..++.+.+|+.. ....+..+..|...+..+.|+|++++|++++.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 238 (297)
T 2ojh_A 159 DIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDA 238 (297)
T ss_dssp ETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEET
T ss_pred ECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCC
Confidence 32 233455666778899999999544444455568889999875 444556677788889999999999999888776
Q ss_pred ----------CcEEEEecCccce--ehcccccccceEEEEEeeCCCEEEEEeCCC
Q 021247 265 ----------RTVKLWDLNMRAA--MQSMTNHTDQVWGVSFRPLGGRVVSVSDDK 307 (315)
Q Consensus 265 ----------~~i~iwd~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~ 307 (315)
+.|.+||+..++. +..+.+|...+..++|+|+|++|++++.|.
T Consensus 239 ~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 239 DVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999987754 333446778899999999999998887764
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.96 E-value=1.6e-26 Score=193.52 Aligned_cols=261 Identities=16% Similarity=0.211 Sum_probs=199.0
Q ss_pred EEEEeeCCCcEEEEcCCCCcceeeccc-ccc-ceEEEEeCCCCCEE-EEeeCCCeEEEEECCCCceeEEeeCCc-----c
Q 021247 32 LLLTGSLDETVKLWRPDDMQLERTNTG-HCL-GVVSVAAHPSGIIA-ASASLDSFVRVFDVDTNASIATLEASP-----S 103 (315)
Q Consensus 32 ~l~sgs~d~~v~~w~~~~~~~~~~~~~-h~~-~v~~~~~~~~g~~l-~s~~~d~~i~~w~~~~~~~~~~~~~~~-----~ 103 (315)
++++++.++.|++||..+.+....+.. +.. .+..+.++|+|..+ +++..++.|++||+.+++.+..+.... .
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 82 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK 82 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccc
Confidence 789999999999999988877666542 222 47889999999755 566678999999999988877665422 2
Q ss_pred cEEEEEECCCCCeEEEEec-----------CCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCE
Q 021247 104 EVWQMQFDPKGTTLAVAGG-----------GSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRR 172 (315)
Q Consensus 104 ~v~~~~~~~~~~~~~~~~~-----------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 172 (315)
.+..++|+|+++.++++.. .++.|.+||+.+++.+..+.... .+..++|+|++++
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~--------------~~~~~~~s~dg~~ 148 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR--------------QITMLAWARDGSK 148 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS--------------SCCCEEECTTSSC
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC--------------CcceeEECCCCCE
Confidence 4567899999987766531 46999999999887766654321 2567889999998
Q ss_pred EEEecCCCcEEEEEcccceeeeeecCCc--cceEEEEEcCCCCcEEEEEeCCC-----------------------eEEE
Q 021247 173 IACGSMDGTISVFDVTRAKFLHHLEGHF--MPVRSLVYSPVDPRVLFSASDDT-----------------------HVHM 227 (315)
Q Consensus 173 l~~~s~dg~i~i~d~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~s~~~d~-----------------------~i~~ 227 (315)
|+++ ++.|++||+.+++....+..+. .++ .|+|++..+++++..++ .|.+
T Consensus 149 l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~---~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 223 (337)
T 1pby_B 149 LYGL--GRDLHVMDPEAGTLVEDKPIQSWEAET---YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLT 223 (337)
T ss_dssp EEEE--SSSEEEEETTTTEEEEEECSTTTTTTT---BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEE
T ss_pred EEEe--CCeEEEEECCCCcEeeeeeccccCCCc---eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEE
Confidence 8877 6899999999988876665443 332 67775444444443333 4689
Q ss_pred EeCCCCeeE-EEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCC
Q 021247 228 YDAEGKSLV-TAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDD 306 (315)
Q Consensus 228 wd~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 306 (315)
||.++++.. .....+...+.+++|+|++++++++ ++.|++||+.+++.+..+..+ ..+.+++|+|+|++|++++.+
T Consensus 224 ~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~ 300 (337)
T 1pby_B 224 MDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGAL 300 (337)
T ss_dssp EETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBS
T ss_pred EeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCC
Confidence 999887664 2334566678899999999998888 799999999988777666543 467899999999999988999
Q ss_pred CcEEEeec
Q 021247 307 KSISLYEY 314 (315)
Q Consensus 307 ~~i~i~~~ 314 (315)
+.|++||+
T Consensus 301 ~~i~v~d~ 308 (337)
T 1pby_B 301 GDLAAYDA 308 (337)
T ss_dssp SEEEEEET
T ss_pred CcEEEEEC
Confidence 99999996
No 137
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.96 E-value=6.2e-27 Score=210.87 Aligned_cols=282 Identities=14% Similarity=0.085 Sum_probs=204.8
Q ss_pred Ccccchh-hhhhccccceEEEEEeecCCCCCcEEEEeeC-CCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEe
Q 021247 1 MKFAGLK-SVENAHEESVWAVTWVPATETRPALLLTGSL-DETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASA 78 (315)
Q Consensus 1 ~~~~~~~-~~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~-d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~ 78 (315)
|++.++. .+..-+..+|++++|+|+++ .|+.++. ||+++||+.++.+..+....+...+..+.|+|+ ++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~DG~----~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~ 81 (582)
T 3o4h_A 7 VEFSRIVRDVERLIAVEKYSLQGVVDGD----KLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVR 81 (582)
T ss_dssp CCHHHHHHHHHHHHHSCEEEEEEEETTT----EEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEE
T ss_pred ccHHHHHHHHHHHhccchheeecCCCCC----eEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEe
Confidence 4444443 33345577999999999886 5787776 999999998665554443333368999999999 777777
Q ss_pred eC---CCeEEEEECCC--CceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCc
Q 021247 79 SL---DSFVRVFDVDT--NASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTD 153 (315)
Q Consensus 79 ~~---d~~i~~w~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 153 (315)
+. +...++|.+.. ......+.... .....+|+|+++.++++...++.+.+||+.+++.......+
T Consensus 82 ~~~~g~~~~~l~~~~~~~~g~~~~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~--------- 151 (582)
T 3o4h_A 82 DVSKGAEQHALFKVNTSRPGEEQRLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP--------- 151 (582)
T ss_dssp ECSTTSCCEEEEEEETTSTTCCEECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES---------
T ss_pred ccCCCCcceEEEEEeccCCCccccccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC---------
Confidence 65 55566655543 22222333222 23456888888765555555556669999877654333110
Q ss_pred cCCCCcceEEEEECCCCCEEEEecCC----CcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCC--eEEE
Q 021247 154 KSSSKKFVLSVAWSPDGRRIACGSMD----GTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT--HVHM 227 (315)
Q Consensus 154 ~~~~~~~i~~~~~~~~~~~l~~~s~d----g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~--~i~~ 227 (315)
..+++|+|||++|++++.+ +.|++||+.+++.. .+..|...+..++|+| +++.|+++..++ .|++
T Consensus 152 -------~~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~ 222 (582)
T 3o4h_A 152 -------GFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISP-GMKVTAGLETAREARLVT 222 (582)
T ss_dssp -------SCEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECT-TSCEEEEEECSSCEEEEE
T ss_pred -------CceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECC-CCCEEEEccCCCeeEEEE
Confidence 1578999999999988776 78999999887754 6677888899999999 567777888888 8999
Q ss_pred EeCCCCeeEEEeecccccEEEEE--------EcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCE
Q 021247 228 YDAEGKSLVTAMSGHASWVLSVD--------ASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGR 299 (315)
Q Consensus 228 wd~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 299 (315)
||..+++.. .+.+|...+..++ |+|+|.++++++.|+++++|++ ++... ...+.+.+++|+ +++.
T Consensus 223 ~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~ 295 (582)
T 3o4h_A 223 VDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKL 295 (582)
T ss_dssp ECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEE
T ss_pred EcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEE
Confidence 999988777 6677766666666 9999999999999999999999 55544 234678899999 9988
Q ss_pred EEEEeCCCc---EEEee
Q 021247 300 VVSVSDDKS---ISLYE 313 (315)
Q Consensus 300 l~s~~~d~~---i~i~~ 313 (315)
+++++.+.+ +.+|+
T Consensus 296 l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 296 VTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp EEEEEETTEEEEEEEET
T ss_pred EEEEcCCCCCCeEEEEc
Confidence 888887754 55554
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.96 E-value=6e-27 Score=216.11 Aligned_cols=291 Identities=14% Similarity=0.195 Sum_probs=203.1
Q ss_pred cceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeecccccc---ceEEEEeCCCCCEEEEeeCC---------C
Q 021247 15 ESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCL---GVVSVAAHPSGIIAASASLD---------S 82 (315)
Q Consensus 15 ~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~---~v~~~~~~~~g~~l~s~~~d---------~ 82 (315)
..+.+++|+|++. ++++ +.||+|++||..+++....+.+|.. .+.+++|+|+|++|++++.+ +
T Consensus 17 ~~~~~~~~spdg~----~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 17 IHDPEAKWISDTE----FIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCCCCBSSSSC----BCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCS
T ss_pred ccccccEEcCCCc----EEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeeccee
Confidence 4578899999875 4555 7899999999988887777766664 48999999999999998765 7
Q ss_pred eEEEEECCCCceeEEeeC---CcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCc------
Q 021247 83 FVRVFDVDTNASIATLEA---SPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTD------ 153 (315)
Q Consensus 83 ~i~~w~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~------ 153 (315)
.+++||+.+++. ..+.. +...+..++|+|+|+.++++.. +.|++||+.+++........... .....
T Consensus 92 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~~~~~g~~~~~~~~~~~~-~~~~g~~~~v~ 167 (723)
T 1xfd_A 92 YYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE--NNIYYCAHVGKQAIRVVSTGKEG-VIYNGLSDWLY 167 (723)
T ss_dssp EEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET--TEEEEESSSSSCCEEEECCCBTT-TEEEEECCHHH
T ss_pred eEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC--CeEEEEECCCCceEEEecCCCCC-ceECcccceeE
Confidence 888999998876 33332 2334778999999998876543 79999999887665443221110 00000
Q ss_pred cCCCCcceEEEEECCCCCEEEEecCCC----------------------------------cEEEEEcccceeeeeecCC
Q 021247 154 KSSSKKFVLSVAWSPDGRRIACGSMDG----------------------------------TISVFDVTRAKFLHHLEGH 199 (315)
Q Consensus 154 ~~~~~~~i~~~~~~~~~~~l~~~s~dg----------------------------------~i~i~d~~~~~~~~~~~~~ 199 (315)
.......+.+++|+|||++|+.++.++ .|++||+.+++....+..+
T Consensus 168 ~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~ 247 (723)
T 1xfd_A 168 EEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPP 247 (723)
T ss_dssp HHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCC
T ss_pred EEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCC
Confidence 000001247899999999998876542 7999999887754555543
Q ss_pred ------ccceEEEEEcCCCCcEEEEEeC----CCeEEEEeCCCCeeEEEeec-ccccEE----EEEEcCCCCeEEE--Ee
Q 021247 200 ------FMPVRSLVYSPVDPRVLFSASD----DTHVHMYDAEGKSLVTAMSG-HASWVL----SVDASPDGAAITT--GS 262 (315)
Q Consensus 200 ------~~~v~~~~~~~~~~~~l~s~~~----d~~i~~wd~~~~~~~~~~~~-~~~~i~----~~~~~~~~~~l~s--~~ 262 (315)
...+..+.|+| +++++++... +..|++||..+++....+.. +..++. .++|+|+|+.|+. +.
T Consensus 248 ~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 326 (723)
T 1xfd_A 248 DDPRMREYYITMVKWAT-STKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAI 326 (723)
T ss_dssp CCGGGSSEEEEEEEESS-SSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEE
T ss_pred ccCCCccceeEEEEEeC-CCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEec
Confidence 56789999999 5667765543 35799999998876655543 344443 7899999997664 55
Q ss_pred CCC------cEEEEe-cCccc--eehcccccccceEE-EEEeeCCCEEEEEeCC---CcEEEeecC
Q 021247 263 SDR------TVKLWD-LNMRA--AMQSMTNHTDQVWG-VSFRPLGGRVVSVSDD---KSISLYEYS 315 (315)
Q Consensus 263 ~d~------~i~iwd-~~~~~--~~~~~~~~~~~v~~-~~~s~~~~~l~s~~~d---~~i~i~~~~ 315 (315)
.++ .|.+|| ...+. ....+..+...+.. ++|+|+|+.|+..+.+ ++++||+++
T Consensus 327 ~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 327 PQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp CCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred ccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 677 466677 33333 14455443344554 6999999999766665 889999863
No 139
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.95 E-value=9.5e-25 Score=184.04 Aligned_cols=272 Identities=13% Similarity=0.147 Sum_probs=185.0
Q ss_pred CCCcEEEEcCC--CCccee-eccccccceEEEEeCCCCCEEEEeeC---CCeEEEEECCCCce--eEEeeCCcccEEEEE
Q 021247 38 LDETVKLWRPD--DMQLER-TNTGHCLGVVSVAAHPSGIIAASASL---DSFVRVFDVDTNAS--IATLEASPSEVWQMQ 109 (315)
Q Consensus 38 ~d~~v~~w~~~--~~~~~~-~~~~h~~~v~~~~~~~~g~~l~s~~~---d~~i~~w~~~~~~~--~~~~~~~~~~v~~~~ 109 (315)
.++.|.+|..+ +.++.. ....+...+..++++|+|+ +++++. ++.|++|++.++.. +..+..+...+..++
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 35567777654 444433 2234556678899999999 444443 68999999977653 334344556677899
Q ss_pred ECCCCCeEEEEecCCCeEEEEecCC-c--ceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEE
Q 021247 110 FDPKGTTLAVAGGGSASVKLWDTAT-W--NLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFD 186 (315)
Q Consensus 110 ~~~~~~~~~~~~~~d~~i~~~d~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d 186 (315)
|+|+++.+++++..++.+.+||+.. + +.+..+..... .+. .......+.+++|+|+|+.+++...++.|.+||
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~---~p~-~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~ 168 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGH---GPR-PEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYN 168 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCC---CSS-TTCSSCCEEEEEECTTSCEEEEETTTTEEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCC---CCC-ccccCCCceEEEECCCCcEEEEeCCCCEEEEEE
Confidence 9999998887776889999999963 2 22222221111 111 112234588999999999667777888999999
Q ss_pred cc-cceee--eeecC-CccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCC--Cee--EEEeeccc------ccEEEEEEc
Q 021247 187 VT-RAKFL--HHLEG-HFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG--KSL--VTAMSGHA------SWVLSVDAS 252 (315)
Q Consensus 187 ~~-~~~~~--~~~~~-~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~--~~~--~~~~~~~~------~~i~~~~~~ 252 (315)
+. +++.. ..+.. ....+..++|+|++..++++...++.+.+|+... ++. +..+.... ..+..++|+
T Consensus 169 ~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 248 (347)
T 3hfq_A 169 VSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLS 248 (347)
T ss_dssp ECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEEC
T ss_pred ECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEEC
Confidence 98 44432 22222 2235678999995444566667789999998763 433 22232222 458889999
Q ss_pred CCCCeE-EEEeCCCcEEEEecCcc---ceehcccccccceEEEEEeeCCCEEEEEeCC-CcEEEeec
Q 021247 253 PDGAAI-TTGSSDRTVKLWDLNMR---AAMQSMTNHTDQVWGVSFRPLGGRVVSVSDD-KSISLYEY 314 (315)
Q Consensus 253 ~~~~~l-~s~~~d~~i~iwd~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-~~i~i~~~ 314 (315)
|+|++| ++...++.|.+|++... +.+..+..+...+.+++|+|+|++|++++.+ +.|.+|++
T Consensus 249 pdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 249 HDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYAR 315 (347)
T ss_dssp TTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEE
Confidence 999977 56667899999999732 3445555566678899999999998877765 89999965
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=4e-25 Score=203.41 Aligned_cols=279 Identities=14% Similarity=0.184 Sum_probs=199.4
Q ss_pred cceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCC---
Q 021247 15 ESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT--- 91 (315)
Q Consensus 15 ~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~--- 91 (315)
..|.+++|+|+ . .++.+ .|+.|++||..+.+... +..+...+.+++|+|+|+.++.+ .|+.|++|++.+
T Consensus 82 ~~v~~~~~spd-~----~~~~~-~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~ 153 (706)
T 2z3z_A 82 FPSFRTLDAGR-G----LVVLF-TQGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGE 153 (706)
T ss_dssp CCCEEEEETTT-T----EEEEE-ETTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTS
T ss_pred cCceeEEECCC-C----eEEEE-ECCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccc
Confidence 57999999997 3 23333 46999999998776543 33456678889999999999885 689999999988
Q ss_pred --CceeEEeeCCccc--------------EEEEEECCCCCeEEEEec--------------------------------C
Q 021247 92 --NASIATLEASPSE--------------VWQMQFDPKGTTLAVAGG--------------------------------G 123 (315)
Q Consensus 92 --~~~~~~~~~~~~~--------------v~~~~~~~~~~~~~~~~~--------------------------------~ 123 (315)
++.......+... +..+.|+|+|+.++++.. .
T Consensus 154 ~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~ 233 (706)
T 2z3z_A 154 GMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSH 233 (706)
T ss_dssp CCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCC
T ss_pred cCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCC
Confidence 7665433333332 478999999998876641 3
Q ss_pred CCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCC-----cEEEEEcccceeeeeec-
Q 021247 124 SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG-----TISVFDVTRAKFLHHLE- 197 (315)
Q Consensus 124 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg-----~i~i~d~~~~~~~~~~~- 197 (315)
+..|.+||+.+++....... ..+...+..++|+|+|++|++++.++ .|++||+.+++....+.
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~-----------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~ 302 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTG-----------EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFV 302 (706)
T ss_dssp EEEEEEEETTTTEEEECCCC-----------SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEE
T ss_pred eeEEEEEECCCCceEeeccC-----------CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEE
Confidence 46799999987664332210 12344689999999999999877665 89999998883332222
Q ss_pred C-Cc---cceEEEEEcC-CCCcEEEEEeCCCeEEEEeCC-CCeeEEEeecccccEEE-EEEcCCCCeEEEEeC-CC----
Q 021247 198 G-HF---MPVRSLVYSP-VDPRVLFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLS-VDASPDGAAITTGSS-DR---- 265 (315)
Q Consensus 198 ~-~~---~~v~~~~~~~-~~~~~l~s~~~d~~i~~wd~~-~~~~~~~~~~~~~~i~~-~~~~~~~~~l~s~~~-d~---- 265 (315)
. +. ..+..+.|+| .++++++++..|+.+++|+.. .+..+..+..|...+.. ++|+|+++.|+.++. ++
T Consensus 303 ~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~ 382 (706)
T 2z3z_A 303 ETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLER 382 (706)
T ss_dssp EECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCB
T ss_pred ccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceE
Confidence 1 11 1245678998 245688888889988888765 45566677777777876 799999987765554 44
Q ss_pred cEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCC----CcEEEeec
Q 021247 266 TVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDD----KSISLYEY 314 (315)
Q Consensus 266 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----~~i~i~~~ 314 (315)
.|..||+..++ ...+. |...+.+++|||+|++|+..+.+ +.|.+||.
T Consensus 383 ~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~ 433 (706)
T 2z3z_A 383 HFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI 433 (706)
T ss_dssp EEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEES
T ss_pred EEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEEC
Confidence 56666776654 33333 56779999999999998766544 46999985
No 141
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=1.4e-25 Score=214.58 Aligned_cols=275 Identities=13% Similarity=0.126 Sum_probs=217.0
Q ss_pred hccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCC-CcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEEC
Q 021247 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD-MQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDV 89 (315)
Q Consensus 11 ~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~-~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~ 89 (315)
.+|...+.++.|++. .++++++.|+.+++|..+. ....+.+..|. .+....|+|+|..++.+ .++.|++|++
T Consensus 200 ~~~~~~v~~~~~s~d-----~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~ 272 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGH-----RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNP 272 (1045)
T ss_dssp ECCSSCCEEEEEETT-----EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECT
T ss_pred cCCCCcccceEEeCC-----EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecC
Confidence 678999999999875 2678888899999997543 23334444444 45667999999988877 4899999999
Q ss_pred CCCceeEEeeC-----------CcccEEEEEEC-CCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCC
Q 021247 90 DTNASIATLEA-----------SPSEVWQMQFD-PKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSS 157 (315)
Q Consensus 90 ~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (315)
... .+..+.. +...+..++|+ |+++.++++. ++.+.+|+...++... +. .+
T Consensus 273 ~~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--~~~i~~~~~~~~~~~~-~~-------------~~ 335 (1045)
T 1k32_A 273 DTE-KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--RGQAFIQDVSGTYVLK-VP-------------EP 335 (1045)
T ss_dssp TTC-CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--TTEEEEECTTSSBEEE-CS-------------CC
T ss_pred Cce-EeeeeccCcccccccccccccccceeeecCCCCCEEEEEE--cCEEEEEcCCCCceEE-cc-------------CC
Confidence 543 3334433 22357899999 9998876654 7899999987655332 11 12
Q ss_pred Cc-ceEEEEECCCCCEEEEecCCCcEE-EEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCee
Q 021247 158 KK-FVLSVAWSPDGRRIACGSMDGTIS-VFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSL 235 (315)
Q Consensus 158 ~~-~i~~~~~~~~~~~l~~~s~dg~i~-i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 235 (315)
.. .+..++|+ +|+.|+.++.++.+. +||+.+++... +.+|...+..++|+| ++++|++++.++.|++||+.+++.
T Consensus 336 ~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~ 412 (1045)
T 1k32_A 336 LRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKP 412 (1045)
T ss_dssp SCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCE
T ss_pred CcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECC-CCCEEEEECCCCeEEEEECCCCce
Confidence 22 58899999 999999888888898 99998766443 347778899999999 678899999999999999999888
Q ss_pred EEEeecccccEEEEEEcCCCCeEEEEeCCC----------cEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeC
Q 021247 236 VTAMSGHASWVLSVDASPDGAAITTGSSDR----------TVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSD 305 (315)
Q Consensus 236 ~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~----------~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 305 (315)
.....+|...+.+++|+|+|++|++++.++ .|++||+..++ ...+..|...+.+++|+|+|++|+.++.
T Consensus 413 ~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 413 TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred EEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 777778888899999999999998887654 89999999876 5566778888999999999999999999
Q ss_pred CCcEEEee
Q 021247 306 DKSISLYE 313 (315)
Q Consensus 306 d~~i~i~~ 313 (315)
++..++|+
T Consensus 492 ~~~~~~~~ 499 (1045)
T 1k32_A 492 RSLDPSPD 499 (1045)
T ss_dssp CCCCCEEC
T ss_pred ccCCcCcc
Confidence 88877775
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=1.8e-24 Score=181.49 Aligned_cols=269 Identities=11% Similarity=0.131 Sum_probs=183.3
Q ss_pred ccccceEEEEEeecCCCCCcEEEEeeCC-CcEEEEcCC--CCcce--eeccccccceEEEEeCCCCCEEEEee-CCCeEE
Q 021247 12 AHEESVWAVTWVPATETRPALLLTGSLD-ETVKLWRPD--DMQLE--RTNTGHCLGVVSVAAHPSGIIAASAS-LDSFVR 85 (315)
Q Consensus 12 ~h~~~v~~v~~~~~~~~~~~~l~sgs~d-~~v~~w~~~--~~~~~--~~~~~h~~~v~~~~~~~~g~~l~s~~-~d~~i~ 85 (315)
.|...+.+++|+|+++ +|++++.+ +.|++|+.+ +.+.. ..+..+. .+..++++|+|.++++++ .++.|+
T Consensus 35 ~~~~~~~~~~~spdg~----~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~ 109 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKR----YLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVS 109 (343)
T ss_dssp ECSSCCCCEEECTTSS----EEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEE
T ss_pred ecCCCCceEEECCCCC----EEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEE
Confidence 5677899999999775 57777776 999999986 44432 2333333 788999999999776665 488999
Q ss_pred EEECCCC---ceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCC-cceeeee--cCCCCCCCCCCccCCCCc
Q 021247 86 VFDVDTN---ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT-WNLIATL--SIPRPEGLKPTDKSSSKK 159 (315)
Q Consensus 86 ~w~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~ 159 (315)
+||+..+ ..+..+.. ...+..++|+|+++.+++++..++.|.+||+.+ ++..... ..... ...
T Consensus 110 ~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~----------~~~ 178 (343)
T 1ri6_A 110 VTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTV----------EGA 178 (343)
T ss_dssp EEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECS----------TTC
T ss_pred EEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccC----------CCC
Confidence 9999533 33344433 345788999999998877766889999999987 4433211 11110 112
Q ss_pred ceEEEEECCCCCEEE-EecCCCcEEEEEccc--cee--eeeec---CC---ccceEEEEEcCCCCcEEEEEeCCCeEEEE
Q 021247 160 FVLSVAWSPDGRRIA-CGSMDGTISVFDVTR--AKF--LHHLE---GH---FMPVRSLVYSPVDPRVLFSASDDTHVHMY 228 (315)
Q Consensus 160 ~i~~~~~~~~~~~l~-~~s~dg~i~i~d~~~--~~~--~~~~~---~~---~~~v~~~~~~~~~~~~l~s~~~d~~i~~w 228 (315)
.+..++|+|++++++ ++..++.+.+||+.. ++. ..... .. ...+..++|+|++..+++++..++.|.+|
T Consensus 179 ~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~ 258 (343)
T 1ri6_A 179 GPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVF 258 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEE
Confidence 367899999999775 455889999999953 332 22221 11 23566899999655555577789999999
Q ss_pred eCC--C--CeeEEEeecccccEEEEEEcCCCCeEEEEe-CCCcEEEEecC--ccc--eehcccccccceEEEEEeeCCC
Q 021247 229 DAE--G--KSLVTAMSGHASWVLSVDASPDGAAITTGS-SDRTVKLWDLN--MRA--AMQSMTNHTDQVWGVSFRPLGG 298 (315)
Q Consensus 229 d~~--~--~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~-~d~~i~iwd~~--~~~--~~~~~~~~~~~v~~~~~s~~~~ 298 (315)
|+. + .+.+..+..+.. +..++|+|++++|++++ .++.|.+|+++ +++ .+..+.. .....+++|.|+.+
T Consensus 259 d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 259 SVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV-GQGPMWVVVNAHEG 335 (343)
T ss_dssp EECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC-SSSCCEEEEEEEC-
T ss_pred EEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccccc-CCCCeeEEEEcccC
Confidence 987 2 234444444444 88899999999888777 68999999554 443 2333333 24566788888644
No 143
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=1.2e-24 Score=208.06 Aligned_cols=294 Identities=10% Similarity=0.037 Sum_probs=214.8
Q ss_pred hhhccccceEEEEEeecCCCCCcEEEEeeCC------CcEEEEcCCCCcceeeccccccce-------EEEEeCCCCCEE
Q 021247 9 VENAHEESVWAVTWVPATETRPALLLTGSLD------ETVKLWRPDDMQLERTNTGHCLGV-------VSVAAHPSGIIA 75 (315)
Q Consensus 9 ~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d------~~v~~w~~~~~~~~~~~~~h~~~v-------~~~~~~~~g~~l 75 (315)
.+.+|...|.+++|+|++. .|+.++.+ ..|++|+..+.+ .+.+..|...+ ..++|+|+|+++
T Consensus 47 ~lt~~~~~v~~~~~SPDG~----~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll 121 (1045)
T 1k32_A 47 KIVSNLGVINNARFFPDGR----KIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGNLI 121 (1045)
T ss_dssp EEECSSSEEEEEEECTTSS----EEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCCEE
T ss_pred EeeeCCCcccCeEECCCCC----EEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccccccCCCCCEEE
Confidence 3457999999999999886 57776543 379999987765 45667788877 899999999977
Q ss_pred EEeeCC------CeEEEEECCCCceeE-------------------------------------------------EeeC
Q 021247 76 ASASLD------SFVRVFDVDTNASIA-------------------------------------------------TLEA 100 (315)
Q Consensus 76 ~s~~~d------~~i~~w~~~~~~~~~-------------------------------------------------~~~~ 100 (315)
++++.+ ..|++|++.++.... .+..
T Consensus 122 ~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~ 201 (1045)
T 1k32_A 122 ISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVD 201 (1045)
T ss_dssp EEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEEC
T ss_pred EEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcC
Confidence 777754 458888876554221 1123
Q ss_pred CcccEEEEEECCCCCeEEEEecCCCeEEEEecCC-cceeeeecCCC--------CCCC------------------CCCc
Q 021247 101 SPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT-WNLIATLSIPR--------PEGL------------------KPTD 153 (315)
Q Consensus 101 ~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~-~~~~~~~~~~~--------~~~~------------------~~~~ 153 (315)
|...+..+.|+++ .+++++..++++++|.+.. +.....+.... +.+. ....
T Consensus 202 ~~~~v~~~~~s~d--~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~ 279 (1045)
T 1k32_A 202 MSTHVSSPVIVGH--RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIEK 279 (1045)
T ss_dssp CSSCCEEEEEETT--EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTCCEEE
T ss_pred CCCcccceEEeCC--EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCceEeee
Confidence 3445666777766 5666777788888887542 11111111000 0000 0000
Q ss_pred cCC-----------CCcceEEEEEC-CCCCEEEEecCCCcEEEEEcccceeeeeecCCcc-ceEEEEEcCCCCcEEEEEe
Q 021247 154 KSS-----------SKKFVLSVAWS-PDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFM-PVRSLVYSPVDPRVLFSAS 220 (315)
Q Consensus 154 ~~~-----------~~~~i~~~~~~-~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~s~~ 220 (315)
... +...+..++|+ |+|++|+.++ ++.+++|++..+... .+..|.. .+..+.|+ +++.++.++
T Consensus 280 l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s--dg~~l~~~s 355 (1045)
T 1k32_A 280 IEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD--TKVAFIHGT 355 (1045)
T ss_dssp CCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS--SEEEEEEEE
T ss_pred eccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc--CCCeEEEEE
Confidence 000 12257899999 9999998887 789999999876644 3556666 88999999 567788888
Q ss_pred CCCeEE-EEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCE
Q 021247 221 DDTHVH-MYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGR 299 (315)
Q Consensus 221 ~d~~i~-~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 299 (315)
.+..+. +||..+++... +.+|...+..++|+|+|+.|++++.++.|++||+.+++.......|...+.+++|||||++
T Consensus 356 ~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~ 434 (1045)
T 1k32_A 356 REGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRF 434 (1045)
T ss_dssp TTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCE
T ss_pred CCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCe
Confidence 888899 99998776544 3477788999999999999999999999999999988877766678888999999999999
Q ss_pred EEEEeCCC----------cEEEeec
Q 021247 300 VVSVSDDK----------SISLYEY 314 (315)
Q Consensus 300 l~s~~~d~----------~i~i~~~ 314 (315)
|++++.++ .|++||+
T Consensus 435 la~~~~~~~~~~~~~~~~~i~l~d~ 459 (1045)
T 1k32_A 435 IAYGFPLKHGETDGYVMQAIHVYDM 459 (1045)
T ss_dssp EEEEEEECSSTTCSCCEEEEEEEET
T ss_pred EEEEecCccccccCCCCCeEEEEEC
Confidence 99887754 9999986
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=9e-25 Score=202.12 Aligned_cols=279 Identities=11% Similarity=0.099 Sum_probs=201.3
Q ss_pred cceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCc--ceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCC
Q 021247 15 ESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQ--LERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92 (315)
Q Consensus 15 ~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~--~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~ 92 (315)
..|.+++|+|+++ .|++++. +.|++|+..+.. ....+..|...+..+.|+|+|++|+.++ ++.|++||+.++
T Consensus 109 ~~v~~~~~SpDg~----~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g 182 (741)
T 2ecf_A 109 TGIVDYQWSPDAQ----RLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASG 182 (741)
T ss_dssp EESCCCEECTTSS----EEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTT
T ss_pred cCcceeEECCCCC----EEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCC
Confidence 3488999999886 5777775 999999998762 3345566778899999999999999887 568999999987
Q ss_pred ceeEEeeCCccc----------------EEEEEECCCCCeEEEEecCCC-------------------------------
Q 021247 93 ASIATLEASPSE----------------VWQMQFDPKGTTLAVAGGGSA------------------------------- 125 (315)
Q Consensus 93 ~~~~~~~~~~~~----------------v~~~~~~~~~~~~~~~~~~d~------------------------------- 125 (315)
+.......+... +..+.|+|+|+.++++..+.+
T Consensus 183 ~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~ 262 (741)
T 2ecf_A 183 RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQ 262 (741)
T ss_dssp EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCE
T ss_pred CEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCe
Confidence 765444333322 367899999998876543321
Q ss_pred -eEEEEecCC-cceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecC-----CCcEEEEEcccceeeeeecC
Q 021247 126 -SVKLWDTAT-WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSM-----DGTISVFDVTRAKFLHHLEG 198 (315)
Q Consensus 126 -~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~-----dg~i~i~d~~~~~~~~~~~~ 198 (315)
.|.+||+.+ ++...... . ..+...+..++| |||++|+.++. +..|++||+.+++....+..
T Consensus 263 ~~l~~~d~~~~~~~~~~~~-~----------~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~ 330 (741)
T 2ecf_A 263 VKLGVISPAEQAQTQWIDL-G----------KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHE 330 (741)
T ss_dssp EEEEEECSSTTCCCEEECC-C----------SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEE
T ss_pred eEEEEEECCCCCceEEecC-C----------CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEc
Confidence 788888876 65432211 0 124456899999 99999986643 56799999998877665554
Q ss_pred Ccc----ceEEEEEcCCCCcEEEEEeCCCeEEEEeCC-CCeeEEEeecccccEEEE-EEcCCCCeEE-EEeCCC--cEEE
Q 021247 199 HFM----PVRSLVYSPVDPRVLFSASDDTHVHMYDAE-GKSLVTAMSGHASWVLSV-DASPDGAAIT-TGSSDR--TVKL 269 (315)
Q Consensus 199 ~~~----~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~l~-s~~~d~--~i~i 269 (315)
+.. .+..+.|+|+ ++++++++.|+.+++|... .+. ...+..|...+..+ .|+|+++.|+ +++.++ .+++
T Consensus 331 ~~~~~~~~~~~~~~spd-g~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l 408 (741)
T 2ecf_A 331 TSPTWVPLHNSLRFLDD-GSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQI 408 (741)
T ss_dssp ECSSCCCCCSCCEECTT-SCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEE
T ss_pred CCCCcCCcCCceEECCC-CeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEE
Confidence 432 3457899994 5588888999877776554 233 66777777788887 5999998765 555555 8999
Q ss_pred EecCc-cceehcccccccceEEEEEeeCCCEEEEEeCC----CcEEEeec
Q 021247 270 WDLNM-RAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDD----KSISLYEY 314 (315)
Q Consensus 270 wd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----~~i~i~~~ 314 (315)
|++.. +.....+.. ...+.+++|||+|++|+....+ ..+.+++.
T Consensus 409 ~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~ 457 (741)
T 2ecf_A 409 YAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRA 457 (741)
T ss_dssp EEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEET
T ss_pred EEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEc
Confidence 99864 444555544 5678899999999998765443 35666653
No 145
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.94 E-value=3.1e-23 Score=175.76 Aligned_cols=280 Identities=13% Similarity=0.155 Sum_probs=185.2
Q ss_pred EEEEee----CCCcEEEEcC--CCCcceeeccccccceEEEEeCCCCCEEEEeeCC----CeEEEEECCCC--c--eeEE
Q 021247 32 LLLTGS----LDETVKLWRP--DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLD----SFVRVFDVDTN--A--SIAT 97 (315)
Q Consensus 32 ~l~sgs----~d~~v~~w~~--~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d----~~i~~w~~~~~--~--~~~~ 97 (315)
.++.|+ .++.|.+|.. .+.++......+...+..++++|+|++|++++.+ +.|++|++... . .+..
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~ 94 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNT 94 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeE
Confidence 456664 4568989865 3454433322266677889999999999988876 79999998763 3 2333
Q ss_pred eeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecC-CCCCCCCCCccCCCCcceEEEEECCCCCEEEE-
Q 021247 98 LEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSI-PRPEGLKPTDKSSSKKFVLSVAWSPDGRRIAC- 175 (315)
Q Consensus 98 ~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~- 175 (315)
...+......+++ +++.++++...++.+.+|++.....+..... ....+..+....+....+.+++|+|+|+++++
T Consensus 95 ~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~ 172 (361)
T 3scy_A 95 QKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLAD 172 (361)
T ss_dssp EECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEE
T ss_pred eccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEE
Confidence 3434455667777 7777877777889999999975433221100 00011111111223344788999999996654
Q ss_pred ecCCCcEEEEEcccce-------e------eeeecCCccceEEEEEcCCCCcEEEEEe-CCCeEEEEeCCCCee--EEEe
Q 021247 176 GSMDGTISVFDVTRAK-------F------LHHLEGHFMPVRSLVYSPVDPRVLFSAS-DDTHVHMYDAEGKSL--VTAM 239 (315)
Q Consensus 176 ~s~dg~i~i~d~~~~~-------~------~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~d~~i~~wd~~~~~~--~~~~ 239 (315)
+..++.|.+|++.... . ......+...++.++|+|+ +++++.++ .++.|.+||+.++.+ +..+
T Consensus 173 ~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~v~~~~~~~v~v~~~~~g~~~~~~~~ 251 (361)
T 3scy_A 173 DLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSD-GKFAYLINEIGGTVIAFRYADGMLDEIQTV 251 (361)
T ss_dssp ETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTT-SSEEEEEETTTCEEEEEEEETTEEEEEEEE
T ss_pred eCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCC-CCEEEEEcCCCCeEEEEEecCCceEEeEEE
Confidence 5568899999886433 1 1112233456789999994 55555444 789999999886644 2222
Q ss_pred e---cccccEEEEEEcCCCCeEEEEeCC--CcEEEEecC--ccc--eehcccccccceEEEEEeeCCCEEEEEe-CCCcE
Q 021247 240 S---GHASWVLSVDASPDGAAITTGSSD--RTVKLWDLN--MRA--AMQSMTNHTDQVWGVSFRPLGGRVVSVS-DDKSI 309 (315)
Q Consensus 240 ~---~~~~~i~~~~~~~~~~~l~s~~~d--~~i~iwd~~--~~~--~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~d~~i 309 (315)
. .+...+..++|+|+|++|+++..+ +.|.+|+++ .++ .+..+.. ...+.+++|+|+|++|++++ .++.|
T Consensus 252 ~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v 330 (361)
T 3scy_A 252 AADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVI 330 (361)
T ss_dssp ESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEE
T ss_pred ecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCE
Confidence 2 233457899999999988666654 899999996 333 3333433 45678999999999988777 67999
Q ss_pred EEeecC
Q 021247 310 SLYEYS 315 (315)
Q Consensus 310 ~i~~~~ 315 (315)
.+|+++
T Consensus 331 ~v~~~d 336 (361)
T 3scy_A 331 QIFERD 336 (361)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 998753
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=2.2e-23 Score=175.72 Aligned_cols=248 Identities=11% Similarity=0.071 Sum_probs=192.8
Q ss_pred cccceEEEEeCCCCCEEEEeeC-------CCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEe
Q 021247 59 HCLGVVSVAAHPSGIIAASASL-------DSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWD 131 (315)
Q Consensus 59 h~~~v~~~~~~~~g~~l~s~~~-------d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d 131 (315)
....+..+.++|+|.+++.++. ++.|.+||..+++.+..+... ..+..++++|+++.++++...++.|.+||
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 3456789999999988877764 568999999999887777643 34678899999998888888889999999
Q ss_pred cCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEec--CCCcEEEEEcccceeeeeecCCccceEEEEEc
Q 021247 132 TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS--MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS 209 (315)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s--~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 209 (315)
..+++.+..+..+..... .......+..++|+|++++++++. .++.|.+||+.+++....+..+...+..+.|+
T Consensus 118 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s 193 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRT----EEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALD 193 (353)
T ss_dssp TTTCCEEEEEESCCCCCC----SSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEE
T ss_pred CCCCeeEEEEecCCCccc----cccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEEC
Confidence 999888877765322110 001112367899999999877665 57889999999999888877555567889999
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCCCeeEEEeec----ccccEEEEEEcCCCCeEEEEeC-CCcEEEEecCccceehccccc
Q 021247 210 PVDPRVLFSASDDTHVHMYDAEGKSLVTAMSG----HASWVLSVDASPDGAAITTGSS-DRTVKLWDLNMRAAMQSMTNH 284 (315)
Q Consensus 210 ~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~~ 284 (315)
| +++.++.++.++.|.+||..+++.+..+.. +...+..++++|+++.+++++. ++.|.+||+.+++.+..+...
T Consensus 194 ~-dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 272 (353)
T 3vgz_A 194 S-EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP 272 (353)
T ss_dssp T-TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS
T ss_pred C-CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC
Confidence 8 566777788899999999999888776653 4556888999999997766655 489999999988877666543
Q ss_pred ccceEEEEEeeCCCEEEEEe-CCCcEEEeec
Q 021247 285 TDQVWGVSFRPLGGRVVSVS-DDKSISLYEY 314 (315)
Q Consensus 285 ~~~v~~~~~s~~~~~l~s~~-~d~~i~i~~~ 314 (315)
. ...++|+|+|++++.++ .+++|.+||.
T Consensus 273 ~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 273 E--SLAVLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp S--CCCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred C--CceEEECCCCCEEEEEECCCCeEEEEEC
Confidence 3 25799999999765554 7899999986
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=2e-24 Score=198.81 Aligned_cols=283 Identities=16% Similarity=0.167 Sum_probs=192.2
Q ss_pred ceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcce-eeccccc-----------------cceEEEEeCCCCCEEEE
Q 021247 16 SVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLE-RTNTGHC-----------------LGVVSVAAHPSGIIAAS 77 (315)
Q Consensus 16 ~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~-~~~~~h~-----------------~~v~~~~~~~~g~~l~s 77 (315)
.++.+.|. +. .+++++.|+ | +||..+++.. +.+..|. ..+.+++|+|+ ..++.
T Consensus 27 ~~~~~~w~--g~----~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~ 97 (706)
T 2z3z_A 27 YVVGLQWM--GD----NYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVL 97 (706)
T ss_dssp -CTTCEEE--TT----EEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEE
T ss_pred cCCCCcCc--CC----eEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEE
Confidence 45667888 32 477777788 8 9999887762 3332332 46999999999 55444
Q ss_pred eeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCC-----cceeeeecCCCCC---CC
Q 021247 78 ASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT-----WNLIATLSIPRPE---GL 149 (315)
Q Consensus 78 ~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~-----~~~~~~~~~~~~~---~~ 149 (315)
+ .++.|++||+.+++.... ..+...+..++|+|+|+.++++ .++.|++||+.+ ++........... +.
T Consensus 98 ~-~~~~i~~~d~~~~~~~~l-~~~~~~~~~~~~SpdG~~la~~--~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 173 (706)
T 2z3z_A 98 F-TQGGLVGFDMLARKVTYL-FDTNEETASLDFSPVGDRVAYV--RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQ 173 (706)
T ss_dssp E-ETTEEEEEETTTTEEEEE-ECCTTCCTTCEECTTSSEEEEE--ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESS
T ss_pred E-ECCEEEEEECCCCceEEc-cCCcccccCCcCCCCCCEEEEE--ECCeEEEEecCcccccCCCcEEeccCCCCCeEccc
Confidence 4 369999999988765443 3445667889999999987664 578999999987 6654332211110 00
Q ss_pred CCCccCCCCcceEEEEECCCCCEEEEec---------------------------------CCCcEEEEEcccceeeeee
Q 021247 150 KPTDKSSSKKFVLSVAWSPDGRRIACGS---------------------------------MDGTISVFDVTRAKFLHHL 196 (315)
Q Consensus 150 ~~~~~~~~~~~i~~~~~~~~~~~l~~~s---------------------------------~dg~i~i~d~~~~~~~~~~ 196 (315)
. ....+...+.+++|+|||++|++++ .+..|++||+.+++.....
T Consensus 174 ~--~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~ 251 (706)
T 2z3z_A 174 A--VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQ 251 (706)
T ss_dssp C--CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECC
T ss_pred c--hhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeec
Confidence 0 0001112357899999999999887 4467999999888754433
Q ss_pred c--CCccceEEEEEcCCCCcEEEEEeCCC-----eEEEEeCCCC-eeEEEee-ccccc---EEEEEEcC--CCCeEEEEe
Q 021247 197 E--GHFMPVRSLVYSPVDPRVLFSASDDT-----HVHMYDAEGK-SLVTAMS-GHASW---VLSVDASP--DGAAITTGS 262 (315)
Q Consensus 197 ~--~~~~~v~~~~~~~~~~~~l~s~~~d~-----~i~~wd~~~~-~~~~~~~-~~~~~---i~~~~~~~--~~~~l~s~~ 262 (315)
. .|...+..+.|+| +++.|++++.++ .|++||..++ ....... .+..+ +..+.|+| +|++++++.
T Consensus 252 ~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~ 330 (706)
T 2z3z_A 252 TGEPKEKFLTNLSWSP-DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSR 330 (706)
T ss_dssp CCSCTTCEEEEEEECT-TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEEC
T ss_pred cCCCCceeEeeEEEEC-CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEc
Confidence 2 4667789999999 566777766554 8999999987 4333222 22222 35689999 999999999
Q ss_pred CCCcEEEEecC-ccceehcccccccceEE-EEEeeCCCEEEEEeCC-C--cEEEeec
Q 021247 263 SDRTVKLWDLN-MRAAMQSMTNHTDQVWG-VSFRPLGGRVVSVSDD-K--SISLYEY 314 (315)
Q Consensus 263 ~d~~i~iwd~~-~~~~~~~~~~~~~~v~~-~~~s~~~~~l~s~~~d-~--~i~i~~~ 314 (315)
.|+.+++|.++ .+..+..+..+...+.+ ++|+|+|+.|+.++.+ + .++||.+
T Consensus 331 ~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 387 (706)
T 2z3z_A 331 RDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCI 387 (706)
T ss_dssp TTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEE
T ss_pred cCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEE
Confidence 99999999886 45666677777777877 7999999988765554 3 3555543
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.93 E-value=9.2e-24 Score=177.70 Aligned_cols=267 Identities=12% Similarity=0.081 Sum_probs=182.6
Q ss_pred cEEEEeeCCCcEEEEcCCCCcceeeccccc-cceEEEEeCCCCCEE-EEeeCCCeEEEEECCCCceeEEeeCCc------
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHC-LGVVSVAAHPSGIIA-ASASLDSFVRVFDVDTNASIATLEASP------ 102 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~-~~v~~~~~~~~g~~l-~s~~~d~~i~~w~~~~~~~~~~~~~~~------ 102 (315)
.++++++.++.|++||..+.+..+.+..+. ..+..+.++|+|+++ ++...++.|++||+.+++.+..+....
T Consensus 12 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~ 91 (349)
T 1jmx_B 12 EYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVG 91 (349)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEE
T ss_pred EEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccccc
Confidence 478999999999999998887766655432 257789999999855 566678999999999988777665432
Q ss_pred ccEEEEEECCCCCeEEEEecC-----------CCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCC
Q 021247 103 SEVWQMQFDPKGTTLAVAGGG-----------SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGR 171 (315)
Q Consensus 103 ~~v~~~~~~~~~~~~~~~~~~-----------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 171 (315)
..+..++|+|+++.++++... ++.|.+||+.+++....+.. ..+...+.+++|+|+|+
T Consensus 92 ~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-----------~~~~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 92 RSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRT-----------FPMPRQVYLMRAADDGS 160 (349)
T ss_dssp ECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEE-----------EECCSSCCCEEECTTSC
T ss_pred ccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeee-----------ccCCCcccceeECCCCc
Confidence 236788999999988766533 58999999987543321110 00111367899999999
Q ss_pred EEEEecCCCcEEEEEcccceeeeeecCCcc------------------------ceEEEEEcCCCCcEEEEEeCCCeEEE
Q 021247 172 RIACGSMDGTISVFDVTRAKFLHHLEGHFM------------------------PVRSLVYSPVDPRVLFSASDDTHVHM 227 (315)
Q Consensus 172 ~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~------------------------~v~~~~~~~~~~~~l~s~~~d~~i~~ 227 (315)
+++++. .|.+||+.+++....+..+.. ....+.+++++............+..
T Consensus 161 -l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 237 (349)
T 1jmx_B 161 -LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 237 (349)
T ss_dssp -EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred -EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEE
Confidence 555543 499999998887766543320 22344555422111000001112223
Q ss_pred EeCCCCeeE-EEeecccccEEEEEEcC-CCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeC
Q 021247 228 YDAEGKSLV-TAMSGHASWVLSVDASP-DGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSD 305 (315)
Q Consensus 228 wd~~~~~~~-~~~~~~~~~i~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 305 (315)
+|..+++.. .....+...+..++++| ++++++++ ++.|.+||+.+++.+..+.. ...+.+++|+|+|++|++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~ 314 (349)
T 1jmx_B 238 VDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGGT 314 (349)
T ss_dssp EETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEESB
T ss_pred EeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEecC
Confidence 555544322 12233556788999999 99998888 88999999998887766653 345779999999999988888
Q ss_pred CCcEEEeec
Q 021247 306 DKSISLYEY 314 (315)
Q Consensus 306 d~~i~i~~~ 314 (315)
++.|++||.
T Consensus 315 ~~~v~v~d~ 323 (349)
T 1jmx_B 315 FNDLAVFNP 323 (349)
T ss_dssp SSEEEEEET
T ss_pred CCeEEEEec
Confidence 999999996
No 149
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=5.7e-23 Score=171.83 Aligned_cols=231 Identities=8% Similarity=0.123 Sum_probs=173.3
Q ss_pred eCCCC-CEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcce-eeeecCCC
Q 021247 68 AHPSG-IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNL-IATLSIPR 145 (315)
Q Consensus 68 ~~~~g-~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-~~~~~~~~ 145 (315)
|.+++ ..+++.+.++.|++||+.+++....+..+.... .++|+|+++.+++++..++.|.+||..+++. ...+...
T Consensus 5 ~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~- 82 (331)
T 3u4y_A 5 FQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG- 82 (331)
T ss_dssp --CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC-
T ss_pred EcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC-
Confidence 44444 557788899999999999998887777666667 9999999998888888789999999988776 4433221
Q ss_pred CCCCCCCccCCCCcceEEEEECCCCCEEEEecCCC---cEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCC
Q 021247 146 PEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG---TISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222 (315)
Q Consensus 146 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg---~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 222 (315)
.....+++|+|+|++++++..++ .|.+||+.+++.+..+..+. ....++|+|++..++++...+
T Consensus 83 ------------~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~ 149 (331)
T 3u4y_A 83 ------------QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY-DAVGIAISPNGNGLILIDRSS 149 (331)
T ss_dssp ------------SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT-TEEEEEECTTSSCEEEEEETT
T ss_pred ------------CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC-CccceEECCCCCEEEEEecCC
Confidence 11133489999999998665553 89999999988877766543 458999999655566676777
Q ss_pred Ce-EEEEeCCCCeeE----EEeecccccEEEEEEcCCCCeE-EEEeCCCcEEEEecCccce---ehcccccccceEEEEE
Q 021247 223 TH-VHMYDAEGKSLV----TAMSGHASWVLSVDASPDGAAI-TTGSSDRTVKLWDLNMRAA---MQSMTNHTDQVWGVSF 293 (315)
Q Consensus 223 ~~-i~~wd~~~~~~~----~~~~~~~~~i~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~---~~~~~~~~~~v~~~~~ 293 (315)
+. |.+|++.....+ .........+..++|+|+|+++ +++..++.|++||+.+++. +..+..+ ..+..++|
T Consensus 150 ~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~ 228 (331)
T 3u4y_A 150 ANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVV 228 (331)
T ss_dssp TTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEE
T ss_pred CceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEE
Confidence 78 999998753222 1222334568899999999865 5555689999999998877 6666543 56788999
Q ss_pred eeCCCEEEEE-eCCCcEEEeec
Q 021247 294 RPLGGRVVSV-SDDKSISLYEY 314 (315)
Q Consensus 294 s~~~~~l~s~-~~d~~i~i~~~ 314 (315)
+|+|++|+.+ ..++.|.+||.
T Consensus 229 spdg~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 229 SRDGSTVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp CTTSSEEEEECSSEEEEEEEET
T ss_pred CCCCCEEEEEEcCCCEEEEEEC
Confidence 9999977654 45788999986
No 150
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=8e-24 Score=173.58 Aligned_cols=234 Identities=17% Similarity=0.171 Sum_probs=174.2
Q ss_pred hhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCC-Ccceeecccc-ccceEEEEeCCCCCEEEEee--CCCeEE
Q 021247 10 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD-MQLERTNTGH-CLGVVSVAAHPSGIIAASAS--LDSFVR 85 (315)
Q Consensus 10 ~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~-~~~~~~~~~h-~~~v~~~~~~~~g~~l~s~~--~d~~i~ 85 (315)
...|...|.+++|+|+++ +|++++ ++.|++|+..+ .+......++ ...+.++.|+|+|+++++++ .++..+
T Consensus 37 ~~~~~~~v~~~~~spdg~----~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 111 (297)
T 2ojh_A 37 VWQTPELFEAPNWSPDGK----YLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSA 111 (297)
T ss_dssp EEEESSCCEEEEECTTSS----EEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCE
T ss_pred eccCCcceEeeEECCCCC----EEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcce
Confidence 456888999999999876 577765 88999999988 7766666555 36788999999999999988 334455
Q ss_pred EE--ECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCC--cceeeeecCCCCCCCCCCccCCCCcce
Q 021247 86 VF--DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT--WNLIATLSIPRPEGLKPTDKSSSKKFV 161 (315)
Q Consensus 86 ~w--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i 161 (315)
+| ++.++. ...+..+ ..+..++|+|+++.+++++..++.+++|++.. .+. ..+ ..+...+
T Consensus 112 l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~~-------------~~~~~~~ 175 (297)
T 2ojh_A 112 IYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE-TRL-------------THGEGRN 175 (297)
T ss_dssp EEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE-EEC-------------CCSSSCE
T ss_pred EEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc-eEc-------------ccCCCcc
Confidence 55 444444 3344333 34888999999998887888899999998642 222 111 1223458
Q ss_pred EEEEECCCCCEEEEec-CCCcEEEEEcc-cceeeeeecCCccceEEEEEcCCCCcEEEEEeCC-----------CeEEEE
Q 021247 162 LSVAWSPDGRRIACGS-MDGTISVFDVT-RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD-----------THVHMY 228 (315)
Q Consensus 162 ~~~~~~~~~~~l~~~s-~dg~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----------~~i~~w 228 (315)
.+++|+|++++|+.++ .++.+.+|++. .+.....+..|...+..+.|+| ++++|+.++.+ +.|++|
T Consensus 176 ~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~l~~~ 254 (297)
T 2ojh_A 176 DGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSP-SGDKVVFVSYDADVFDHPRDLDVRVQLM 254 (297)
T ss_dssp EEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECT-TSSEEEEEEEETTCCSCCSSEEEEEEEE
T ss_pred ccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECC-CCCEEEEEEcCCCCCcccccCceEEEEE
Confidence 8999999999887655 58899999886 4555667777778899999999 55666666554 579999
Q ss_pred eCCCCee--EEEeecccccEEEEEEcCCCCeEEEEeCCC
Q 021247 229 DAEGKSL--VTAMSGHASWVLSVDASPDGAAITTGSSDR 265 (315)
Q Consensus 229 d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~ 265 (315)
|+++++. +..+.+|...+..++|+|+++.|++++.+.
T Consensus 255 d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 255 DMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp ETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred ecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 9987755 334457888899999999999988877654
No 151
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.93 E-value=1.3e-24 Score=200.38 Aligned_cols=299 Identities=14% Similarity=0.149 Sum_probs=203.8
Q ss_pred Ccccchhhhhhccc-cceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeecccccc---ceEEEEeCCCCCEEE
Q 021247 1 MKFAGLKSVENAHE-ESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCL---GVVSVAAHPSGIIAA 76 (315)
Q Consensus 1 ~~~~~~~~~~~~h~-~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~---~v~~~~~~~~g~~l~ 76 (315)
|+..-++.+....- ..-..++|+|++. ++..+.|+.|++|+..+++......+|.. .+.+++|+|+|++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~-----~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la 75 (719)
T 1z68_A 1 MRALTLKDILNGTFSYKTFFPNWISGQE-----YLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVY 75 (719)
T ss_dssp CBCCCHHHHHHTTTCCCCCCCEESSSSE-----EEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEE
T ss_pred CCcccHHHHhcCcccCCCCccEECCCCe-----EEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEE
Confidence 44455555544321 1234789999773 44445699999999998887666665554 489999999999999
Q ss_pred EeeC---------CCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCC
Q 021247 77 SASL---------DSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE 147 (315)
Q Consensus 77 s~~~---------d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~ 147 (315)
.++. |+.|++||+.+++.+.... -...+..++|+|+|+.++++ .++.|++||+.+++...... ....
T Consensus 76 ~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~--~~~~i~~~~~~~g~~~~l~~-~~~~ 151 (719)
T 1z68_A 76 LESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYV--YQNNIYLKQRPGDPPFQITF-NGRE 151 (719)
T ss_dssp EEEEEEECSSSCEEEEEEEEETTTTEECCSSC-CCSSBCCEEECSSTTCEEEE--ETTEEEEESSTTSCCEECCC-CCBT
T ss_pred EEecCceeEEeecceEEEEEECCCCcccccee-cCcccccceECCCCCEEEEE--ECCeEEEEeCCCCCcEEEec-CCCc
Confidence 8876 7899999999887621011 12457889999999988765 37899999998776543221 1100
Q ss_pred CCCCCccCCCCcc---------eEEEEECCCCCEEEEecCCC----------------------------------cEEE
Q 021247 148 GLKPTDKSSSKKF---------VLSVAWSPDGRRIACGSMDG----------------------------------TISV 184 (315)
Q Consensus 148 ~~~~~~~~~~~~~---------i~~~~~~~~~~~l~~~s~dg----------------------------------~i~i 184 (315)
. ....++..+ ..+++|+|||++|+.++.|. .|++
T Consensus 152 ~---~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~ 228 (719)
T 1z68_A 152 N---KIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFI 228 (719)
T ss_dssp T---TEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEE
T ss_pred C---CeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEE
Confidence 0 000011111 25899999999999887542 7889
Q ss_pred EEcccceee--------eeecCCccceEEEEEcCCCCcEEEEEeCC----CeEEEEe----CCCCeeEEEe----ecccc
Q 021247 185 FDVTRAKFL--------HHLEGHFMPVRSLVYSPVDPRVLFSASDD----THVHMYD----AEGKSLVTAM----SGHAS 244 (315)
Q Consensus 185 ~d~~~~~~~--------~~~~~~~~~v~~~~~~~~~~~~l~s~~~d----~~i~~wd----~~~~~~~~~~----~~~~~ 244 (315)
||+.+++.. ..+.+|...+..++|+|+ ++++++.... ..|.+|| ..+++....+ .+|..
T Consensus 229 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD-~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~ 307 (719)
T 1z68_A 229 IDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTD-ERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTG 307 (719)
T ss_dssp EESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSS-SEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSS
T ss_pred EECCCCCccceeEccCCccCCCCcceEEEeEEeCC-CeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCc
Confidence 999877642 123457778999999995 6777764432 3588899 7776654444 46677
Q ss_pred cEE-----EEEEcCCCCeEE--EEeCCC--cEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCC-----CcEE
Q 021247 245 WVL-----SVDASPDGAAIT--TGSSDR--TVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDD-----KSIS 310 (315)
Q Consensus 245 ~i~-----~~~~~~~~~~l~--s~~~d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----~~i~ 310 (315)
++. .+.|+|+|+.++ +...++ .|.+|++..++ ...+..+...+..+.++ +++.|+..+.+ ++++
T Consensus 308 ~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~ 385 (719)
T 1z68_A 308 WAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRN 385 (719)
T ss_dssp CSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBE
T ss_pred eEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEE
Confidence 776 789999998554 455566 46666776655 34455555668888888 88888776665 8899
Q ss_pred Eeec
Q 021247 311 LYEY 314 (315)
Q Consensus 311 i~~~ 314 (315)
||.+
T Consensus 386 l~~~ 389 (719)
T 1z68_A 386 IYRI 389 (719)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
No 152
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=1.3e-23 Score=193.78 Aligned_cols=283 Identities=13% Similarity=0.062 Sum_probs=191.7
Q ss_pred hhcccc---ceEEEEEeecCCCCCcEEEEeeCC---------CcEEEEcCCCCccee--eccccccceEEEEeCCCCCEE
Q 021247 10 ENAHEE---SVWAVTWVPATETRPALLLTGSLD---------ETVKLWRPDDMQLER--TNTGHCLGVVSVAAHPSGIIA 75 (315)
Q Consensus 10 ~~~h~~---~v~~v~~~~~~~~~~~~l~sgs~d---------~~v~~w~~~~~~~~~--~~~~h~~~v~~~~~~~~g~~l 75 (315)
...|.. .|.+++|+|+++ .|++++.+ +.+.+||.++.+... ...+|...+..+.|+|+|+.|
T Consensus 53 ~~~~~~~~~~v~~~~~SpDg~----~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~l 128 (723)
T 1xfd_A 53 IEGKKIESLRAIRYEISPDRE----YALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQL 128 (723)
T ss_dssp ECTTTTTTTTCSEEEECTTSS----EEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCE
T ss_pred eccccccccccceEEECCCCC----EEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEE
Confidence 344544 499999999876 58888764 778899998776522 223455558899999999999
Q ss_pred EEeeCCCeEEEEECCCCceeEEeeCCcccE------------------EEEEECCCCCeEEEEecCC-------------
Q 021247 76 ASASLDSFVRVFDVDTNASIATLEASPSEV------------------WQMQFDPKGTTLAVAGGGS------------- 124 (315)
Q Consensus 76 ~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v------------------~~~~~~~~~~~~~~~~~~d------------- 124 (315)
+.++. +.|++||+.+++.......+...+ ..++|+|+|+.++++...+
T Consensus 129 a~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~ 207 (723)
T 1xfd_A 129 IFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTG 207 (723)
T ss_dssp EEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSS
T ss_pred EEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCC
Confidence 98875 799999999887766554433322 6899999999887665332
Q ss_pred --------------------CeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecC----CC
Q 021247 125 --------------------ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSM----DG 180 (315)
Q Consensus 125 --------------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~----dg 180 (315)
.+|++||+.+++....+..+. ....+...+..++|+|||+++++.+. +.
T Consensus 208 ~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~ 280 (723)
T 1xfd_A 208 SIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPD-------DPRMREYYITMVKWATSTKVAVTWLNRAQNVS 280 (723)
T ss_dssp SSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCC-------CGGGSSEEEEEEEESSSSEEEEEEEETTSCEE
T ss_pred cCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCc-------cCCCccceeEEEEEeCCCeEEEEEEcCCCCeE
Confidence 268888887765433332110 01112456889999999998876543 35
Q ss_pred cEEEEEcccceeeeeecC-Cccce----EEEEEcCCCCcEEEE-EeCCC------eEEEEe-CCCCe--eEEEeeccccc
Q 021247 181 TISVFDVTRAKFLHHLEG-HFMPV----RSLVYSPVDPRVLFS-ASDDT------HVHMYD-AEGKS--LVTAMSGHASW 245 (315)
Q Consensus 181 ~i~i~d~~~~~~~~~~~~-~~~~v----~~~~~~~~~~~~l~s-~~~d~------~i~~wd-~~~~~--~~~~~~~~~~~ 245 (315)
.|++||+.+++....+.. +...+ ..+.|+|++..+++. +..++ .|.+|| ..++. ....+..+...
T Consensus 281 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~ 360 (723)
T 1xfd_A 281 ILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWD 360 (723)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSC
T ss_pred EEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeE
Confidence 799999988876555433 22333 377999965555554 55677 577788 44443 13344433334
Q ss_pred EEE-EEEcCCCCeEEEEeCC---CcEEEEecCccc--eehcccc---cccceEEEEEeeCCCEEEEEe
Q 021247 246 VLS-VDASPDGAAITTGSSD---RTVKLWDLNMRA--AMQSMTN---HTDQVWGVSFRPLGGRVVSVS 304 (315)
Q Consensus 246 i~~-~~~~~~~~~l~s~~~d---~~i~iwd~~~~~--~~~~~~~---~~~~v~~~~~s~~~~~l~s~~ 304 (315)
+.. ++|+|+++.|+..+.+ +.+++|+++... ....+.. |...+..++|+|+|++|+...
T Consensus 361 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 361 VTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp EEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEEC
T ss_pred EEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEc
Confidence 444 6899999988766555 789999986432 2333433 566788999999999887543
No 153
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.92 E-value=1.2e-23 Score=182.24 Aligned_cols=222 Identities=18% Similarity=0.135 Sum_probs=158.3
Q ss_pred CeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCC---CCCCccCCCC
Q 021247 82 SFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEG---LKPTDKSSSK 158 (315)
Q Consensus 82 ~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 158 (315)
+.+++|+.... .....+..+++++++..++ +++.++ +++|+.......... ...... ..+.....+.
T Consensus 23 ~~vri~~~~~~-------~~~~~~n~lavs~~~~~l~-~~~~dg-v~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 92 (434)
T 2oit_A 23 KKVRIFDSPEE-------LPKERSSLLAVSNKYGLVF-AGGASG-LQIFPTKNLLIQNKP-GDDPNKIVDKVQGLLVPMK 92 (434)
T ss_dssp CEEECSCCCSS-------CCCSCCBCEEEETTTTEEE-EEETTE-EEEEEHHHHCCCCCT-TCCTTCEEECCCCEEECCS
T ss_pred eeEEecCCccc-------cCCCCccEEEEecCCCEEE-EECCCE-EEEEEchHhhhhccc-ccCcccccccCccccccCC
Confidence 46777764311 1233467888999888665 455565 899886432110000 000000 0000111234
Q ss_pred cceEEEEECCCCCEEE----EecCCCcEEEEEcccc--------ee---eeeecCCccceEEEEEcCCCCcEEEEEeCCC
Q 021247 159 KFVLSVAWSPDGRRIA----CGSMDGTISVFDVTRA--------KF---LHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 223 (315)
Q Consensus 159 ~~i~~~~~~~~~~~l~----~~s~dg~i~i~d~~~~--------~~---~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~ 223 (315)
..|.+++|+|++++|+ +|+.|+.|++||+.+. +. ...+.+|...|.+++|+|.++.+|++++.|+
T Consensus 93 ~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS
T ss_pred CcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC
Confidence 4699999999999999 7889999999999765 21 3455679999999999997688999999999
Q ss_pred eEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccc-------cccceEEEEEeeC
Q 021247 224 HVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN-------HTDQVWGVSFRPL 296 (315)
Q Consensus 224 ~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-------~~~~v~~~~~s~~ 296 (315)
+|++||++.+..+....+|...|.+++|+|+|++|++|+.||+|++||.+ +.....+.. |...+.++.|+++
T Consensus 173 ~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~ 251 (434)
T 2oit_A 173 SIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGT 251 (434)
T ss_dssp CEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEET
T ss_pred eEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecC
Confidence 99999999887766677889999999999999999999999999999998 433333322 3348999999998
Q ss_pred CCEEEE-EeCCCc------EEEeec
Q 021247 297 GGRVVS-VSDDKS------ISLYEY 314 (315)
Q Consensus 297 ~~~l~s-~~~d~~------i~i~~~ 314 (315)
+.++++ .+.||. +++|++
T Consensus 252 ~~~l~~~~~~dg~~~~~~~v~i~~l 276 (434)
T 2oit_A 252 YVFAIVYAAADGTLETSPDVVMALL 276 (434)
T ss_dssp TEEEEEEEETTCCSSSCCEEEEEEC
T ss_pred ceEEEEEccCCCccCCCCceEEEEe
Confidence 877754 334433 888886
No 154
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=2.7e-22 Score=169.00 Aligned_cols=252 Identities=15% Similarity=0.150 Sum_probs=172.6
Q ss_pred ccccceEEEEEeecCCCCCcEEEEeeC--CCcEEEEcCCCCcc--eeeccccccceEEEEeCCCCCEEEEee-CCCeEEE
Q 021247 12 AHEESVWAVTWVPATETRPALLLTGSL--DETVKLWRPDDMQL--ERTNTGHCLGVVSVAAHPSGIIAASAS-LDSFVRV 86 (315)
Q Consensus 12 ~h~~~v~~v~~~~~~~~~~~~l~sgs~--d~~v~~w~~~~~~~--~~~~~~h~~~v~~~~~~~~g~~l~s~~-~d~~i~~ 86 (315)
.+...+..++|+|+++ +++++.. ++.|++|+.++.+. ......+...+..++++|+|++|++++ .++.+++
T Consensus 37 ~~~~~p~~~a~spdg~----l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v 112 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC----LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEV 112 (347)
T ss_dssp EECSCCCCEEECTTCE----EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEE
T ss_pred eccCCcceEEEccCCe----EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEE
Confidence 4456777889988653 3444332 68999999866543 233344667788999999999888777 7899999
Q ss_pred EECCCCc---eeEEeeCC---------cccEEEEEECCCCCeEEEEecCCCeEEEEecC-CcceeeeecCCCCCCCCCCc
Q 021247 87 FDVDTNA---SIATLEAS---------PSEVWQMQFDPKGTTLAVAGGGSASVKLWDTA-TWNLIATLSIPRPEGLKPTD 153 (315)
Q Consensus 87 w~~~~~~---~~~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~ 153 (315)
|++.... .+..+... ...+..++|+|+++ ++++...++.|.+||+. +++..........
T Consensus 113 ~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~------- 184 (347)
T 3hfq_A 113 MKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTME------- 184 (347)
T ss_dssp EEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECC-------
T ss_pred EEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcC-------
Confidence 9996432 22333221 12478899999999 77888888999999998 4433221111111
Q ss_pred cCCCCcceEEEEECCCCCEEEE-ecCCCcEEEEEccc--cee--eeeecCCc------cceEEEEEcCCCCcEEEEEeCC
Q 021247 154 KSSSKKFVLSVAWSPDGRRIAC-GSMDGTISVFDVTR--AKF--LHHLEGHF------MPVRSLVYSPVDPRVLFSASDD 222 (315)
Q Consensus 154 ~~~~~~~i~~~~~~~~~~~l~~-~s~dg~i~i~d~~~--~~~--~~~~~~~~------~~v~~~~~~~~~~~~l~s~~~d 222 (315)
....+..++|+|+|+++++ +..++.+.+|++.. ++. ...+.... ..+..++|+|++..++++...+
T Consensus 185 ---~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~ 261 (347)
T 3hfq_A 185 ---AGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY 261 (347)
T ss_dssp ---TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT
T ss_pred ---CCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC
Confidence 0113668999999996655 66788999999873 443 22222221 3478899999544455777789
Q ss_pred CeEEEEeCCC---CeeEEEeecccccEEEEEEcCCCCeEEEEeCC-CcEEEEec--Ccccee
Q 021247 223 THVHMYDAEG---KSLVTAMSGHASWVLSVDASPDGAAITTGSSD-RTVKLWDL--NMRAAM 278 (315)
Q Consensus 223 ~~i~~wd~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d-~~i~iwd~--~~~~~~ 278 (315)
+.|.+|++.. .+.+..+..+...+..++|+|+|++|++++.+ +.|.+|++ .+++..
T Consensus 262 ~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 262 NTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp TEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 9999999862 24555556666678899999999988887765 89999955 445443
No 155
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.92 E-value=1.6e-23 Score=188.64 Aligned_cols=232 Identities=10% Similarity=0.060 Sum_probs=169.9
Q ss_pred ccceEEEEeCCCCCEEEEeeC-CCeEEEEECCCCceeEEeeCCc-ccEEEEEECCCCCeEEEEecC---CCeEEEEecCC
Q 021247 60 CLGVVSVAAHPSGIIAASASL-DSFVRVFDVDTNASIATLEASP-SEVWQMQFDPKGTTLAVAGGG---SASVKLWDTAT 134 (315)
Q Consensus 60 ~~~v~~~~~~~~g~~l~s~~~-d~~i~~w~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~---d~~i~~~d~~~ 134 (315)
..+|.++.++|||++|+.++. |++++||++.++... .+..+. ..+..+.|+|+ + +++++.. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd-~-~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG-R-VILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS-E-EEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC-e-EEEEeccCCCCcceEEEEEec
Confidence 558999999999999998877 999999998665544 444444 57899999998 4 5555443 45566665432
Q ss_pred --cceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCE-EEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCC
Q 021247 135 --WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRR-IACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 211 (315)
Q Consensus 135 --~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~ 211 (315)
......+. . .......+|+|+++. +++...++.+.+||+.+++.......+. .++.|+|
T Consensus 98 ~~~g~~~~l~--~------------~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~sp- 159 (582)
T 3o4h_A 98 SRPGEEQRLE--A------------VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDI- 159 (582)
T ss_dssp TSTTCCEECT--T------------SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEE-
T ss_pred cCCCcccccc--C------------CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECC-
Confidence 11111111 0 011335678888763 3333344455699998887654443332 7889999
Q ss_pred CCcEEEEEeCC----CeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCC--cEEEEecCccceehcccccc
Q 021247 212 DPRVLFSASDD----THVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDR--TVKLWDLNMRAAMQSMTNHT 285 (315)
Q Consensus 212 ~~~~l~s~~~d----~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~ 285 (315)
+++++++++.+ ..|++||+.+++.. .+..|...+..++|+|||+.|+++..++ .|++||+..++.. .+..|.
T Consensus 160 DG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~ 237 (582)
T 3o4h_A 160 RGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPS 237 (582)
T ss_dssp ETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSC
T ss_pred CCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCC
Confidence 67788877766 78999999887654 5677888899999999999999888899 8999999988776 666777
Q ss_pred cceEEEE--------EeeCCCEEEEEeCCCcEEEeec
Q 021247 286 DQVWGVS--------FRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 286 ~~v~~~~--------~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
..+.+++ |+|||..+++++.|++++||++
T Consensus 238 ~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 238 KDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp SHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred cChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 6666677 9999988899999999999975
No 156
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.91 E-value=9.9e-23 Score=170.46 Aligned_cols=244 Identities=15% Similarity=0.111 Sum_probs=181.9
Q ss_pred ceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccc-----cccceEEEEeCCCCCEEEEee-----------
Q 021247 16 SVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTG-----HCLGVVSVAAHPSGIIAASAS----------- 79 (315)
Q Consensus 16 ~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~-----h~~~v~~~~~~~~g~~l~s~~----------- 79 (315)
.+.+++|+|+++ .++++++.++.|.+||..+.+....+.. |...+..+.++|+|.+++++.
T Consensus 35 ~~~~~~~s~dg~---~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 111 (337)
T 1pby_B 35 TPMVPMVAPGGR---IAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFE 111 (337)
T ss_dssp CCCCEEECTTSS---EEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEE
T ss_pred CccceEEcCCCC---EEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccccccc
Confidence 478899999764 2566777789999999988776654432 233577899999998888775
Q ss_pred -CCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCC
Q 021247 80 -LDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSK 158 (315)
Q Consensus 80 -~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (315)
.++.|++||+.+++.+..+.. ...+..++|+|+++.++++ ++.|.+||+.+++....+......
T Consensus 112 ~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~~~~~~~~~~~~----------- 176 (337)
T 1pby_B 112 VQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL---GRDLHVMDPEAGTLVEDKPIQSWE----------- 176 (337)
T ss_dssp ECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE---SSSEEEEETTTTEEEEEECSTTTT-----------
T ss_pred ccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe---CCeEEEEECCCCcEeeeeeccccC-----------
Confidence 579999999998887777664 3456788999999977665 588999999988877665432210
Q ss_pred cceEEEEECCCCCEEEEecC-CC-----------------------cEEEEEcccceee-eeecCCccceEEEEEcCCCC
Q 021247 159 KFVLSVAWSPDGRRIACGSM-DG-----------------------TISVFDVTRAKFL-HHLEGHFMPVRSLVYSPVDP 213 (315)
Q Consensus 159 ~~i~~~~~~~~~~~l~~~s~-dg-----------------------~i~i~d~~~~~~~-~~~~~~~~~v~~~~~~~~~~ 213 (315)
. .+.|+|+++.++.... ++ .|.+||+.+++.. ..+..+...+..+.|+| ++
T Consensus 177 ~---~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-dg 252 (337)
T 1pby_B 177 A---ETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNP-AK 252 (337)
T ss_dssp T---TTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECT-TS
T ss_pred C---CceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECC-CC
Confidence 0 1256788776654432 22 4689999887764 22334556778899999 55
Q ss_pred cEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehccccc
Q 021247 214 RVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNH 284 (315)
Q Consensus 214 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 284 (315)
++++++ ++.|.+||.++++.+..+..+ ..+.+++|+|++++|++++.++.|++||+.+++.+..+..+
T Consensus 253 ~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 253 TRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp SEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred CEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 666666 789999999988877766543 45788999999999998999999999999988877766544
No 157
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.91 E-value=3.4e-22 Score=170.85 Aligned_cols=284 Identities=12% Similarity=0.058 Sum_probs=190.5
Q ss_pred hccccceEE-----EEEeecCCCCCcEEEEeeC-CCc--EEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCC
Q 021247 11 NAHEESVWA-----VTWVPATETRPALLLTGSL-DET--VKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDS 82 (315)
Q Consensus 11 ~~h~~~v~~-----v~~~~~~~~~~~~l~sgs~-d~~--v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~ 82 (315)
..|...+.. .+|+|++. .|+.++. ++. |.+|+.++.+......++...+....|+|+|+.|+.++.++
T Consensus 27 t~~~~~~~~~~~~~~~~SpDg~----~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~ 102 (388)
T 3pe7_A 27 TPPDVTCHRNYFYQKCFTRDGS----KLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGR 102 (388)
T ss_dssp SCTTSCEECCCTTSCCBCTTSC----EEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTT
T ss_pred cCCcccccchhhcCccCCCCCC----EEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCC
Confidence 345555555 78999876 4666665 674 78888888777666666666666778999999999999999
Q ss_pred eEEEEECCCCceeEEeeCCcccEEEE--EECCCCCeEEEE---------------------ecCCCeEEEEecCCcceee
Q 021247 83 FVRVFDVDTNASIATLEASPSEVWQM--QFDPKGTTLAVA---------------------GGGSASVKLWDTATWNLIA 139 (315)
Q Consensus 83 ~i~~w~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~---------------------~~~d~~i~~~d~~~~~~~~ 139 (315)
.|++||+.+++.......+...+... .++|++..++.. ...+..|.+||+.+++...
T Consensus 103 ~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~ 182 (388)
T 3pe7_A 103 NLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV 182 (388)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE
T ss_pred eEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE
Confidence 99999999988766665555444333 348888866432 2234689999998775443
Q ss_pred eecCCCCCCCCCCccCCCCcceEEEEECC-CCCEEEEecCC------CcEEEEEcccceeeeeecCCc--cceEEEEEcC
Q 021247 140 TLSIPRPEGLKPTDKSSSKKFVLSVAWSP-DGRRIACGSMD------GTISVFDVTRAKFLHHLEGHF--MPVRSLVYSP 210 (315)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~s~d------g~i~i~d~~~~~~~~~~~~~~--~~v~~~~~~~ 210 (315)
... +...+..++|+| +|+.|+..+.+ ..|.++|+..+... .+..+. ..+....|+|
T Consensus 183 l~~--------------~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~sp 247 (388)
T 3pe7_A 183 ILQ--------------ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAEGESCTHEFWVP 247 (388)
T ss_dssp EEE--------------ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCTTEEEEEEEECT
T ss_pred eec--------------CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCCCcccccceECC
Confidence 321 122478899999 99988776543 37888887655433 333333 3577889999
Q ss_pred CCCcEEEEEeCCC----eEEEEeCCCCeeEE--Eeeccccc---EEEEEEcCCCCeEEEE---------eCCCcEEEEec
Q 021247 211 VDPRVLFSASDDT----HVHMYDAEGKSLVT--AMSGHASW---VLSVDASPDGAAITTG---------SSDRTVKLWDL 272 (315)
Q Consensus 211 ~~~~~l~s~~~d~----~i~~wd~~~~~~~~--~~~~~~~~---i~~~~~~~~~~~l~s~---------~~d~~i~iwd~ 272 (315)
++..+++.+..++ .|++||+.+++... ...++... ...+.|+|+|+.|+.. ..+..|++||+
T Consensus 248 dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~ 327 (388)
T 3pe7_A 248 DGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNM 327 (388)
T ss_dssp TSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEET
T ss_pred CCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEec
Confidence 5554544444322 49999998876432 22221111 1123689999877643 55678999999
Q ss_pred Cccceehccccccc-----------ceEEEEEeeCCCEEEEEe-CCCcEEEeec
Q 021247 273 NMRAAMQSMTNHTD-----------QVWGVSFRPLGGRVVSVS-DDKSISLYEY 314 (315)
Q Consensus 273 ~~~~~~~~~~~~~~-----------~v~~~~~s~~~~~l~s~~-~d~~i~i~~~ 314 (315)
..++. ..+..+.. .+.+++|+|||++|+..+ .++...||.+
T Consensus 328 ~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 328 KNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp TTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred cCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 87654 33444444 477889999999887665 4788888865
No 158
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=2.2e-22 Score=174.33 Aligned_cols=216 Identities=15% Similarity=0.156 Sum_probs=159.6
Q ss_pred CcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCC----------ceeEE-----eeCCccc
Q 021247 40 ETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN----------ASIAT-----LEASPSE 104 (315)
Q Consensus 40 ~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~----------~~~~~-----~~~~~~~ 104 (315)
+.+++|+... . . +...++.+++++++.++++++.|+ +++|+.... ..+.. ...+...
T Consensus 23 ~~vri~~~~~-~----~--~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSPE-E----L--PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCCS-S----C--CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCcc-c----c--CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 5688886421 1 1 233578889999999999999888 999875321 01111 1123567
Q ss_pred EEEEEECCCCCeEEE---EecCCCeEEEEecCCc--------ceeeeecCCCCCCCCCCccCCCCcceEEEEECCC-CCE
Q 021247 105 VWQMQFDPKGTTLAV---AGGGSASVKLWDTATW--------NLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD-GRR 172 (315)
Q Consensus 105 v~~~~~~~~~~~~~~---~~~~d~~i~~~d~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~ 172 (315)
|.+++|+|+++.+++ +++.|++|++||+++. +.+..+. ....|...|.+++|+|+ +++
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~----------~~~~h~~~V~~v~~~p~~~~~ 164 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHK----------LLKDAGGMVIDMKWNPTVPSM 164 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEE----------CCCSGGGSEEEEEECSSCTTE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeee----------ccCCCCCceEEEEECCCCCCE
Confidence 999999999998776 7888999999998764 1111111 11235677999999997 789
Q ss_pred EEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecc-------ccc
Q 021247 173 IACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGH-------ASW 245 (315)
Q Consensus 173 l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~-------~~~ 245 (315)
|++++.||.|++||++++.......+|...|.+++|+| ++++|++|+.|+.|++||.+ ++....+..| ...
T Consensus 165 las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~ 242 (434)
T 2oit_A 165 VAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVR 242 (434)
T ss_dssp EEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECT-TSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEE
T ss_pred EEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCcee
Confidence 99999999999999998877666777889999999999 57899999999999999998 4444444332 347
Q ss_pred EEEEEEcCCCCeEEE-EeCCC------cEEEEecCcc
Q 021247 246 VLSVDASPDGAAITT-GSSDR------TVKLWDLNMR 275 (315)
Q Consensus 246 i~~~~~~~~~~~l~s-~~~d~------~i~iwd~~~~ 275 (315)
+.++.|++++.++++ ...|| .+++|++...
T Consensus 243 v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 243 VLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 999999998877644 33443 3899999764
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.91 E-value=1.6e-21 Score=165.45 Aligned_cols=272 Identities=8% Similarity=0.050 Sum_probs=179.5
Q ss_pred EEEEeeCC--CcEEEEcC--CCCcceeecc---ccccceEEEEeCCCCCEEEEeeCCCeEEEEECC-CCceeEEeeCC-c
Q 021247 32 LLLTGSLD--ETVKLWRP--DDMQLERTNT---GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD-TNASIATLEAS-P 102 (315)
Q Consensus 32 ~l~sgs~d--~~v~~w~~--~~~~~~~~~~---~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~-~~~~~~~~~~~-~ 102 (315)
.++.|+.. +.|.+|+. +++++..... +....+..++++|+|+++++++.+ .|.+|++. +++........ .
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 46677764 56877764 4444432211 233467789999999999988888 99999997 66554332211 1
Q ss_pred ccEEEEEECCCCCe-EEEEec-------------CCCeEEEEecCC-cceeeeecCCCCCCCCCCccCCCCcceEEEEEC
Q 021247 103 SEVWQMQFDPKGTT-LAVAGG-------------GSASVKLWDTAT-WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS 167 (315)
Q Consensus 103 ~~v~~~~~~~~~~~-~~~~~~-------------~d~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 167 (315)
+....++++|+++. +++++. .++++.+|++.. ++....+.... ..+...+.+++|+
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~---------~~~~~~~~~~~~s 153 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYE---------YQENTGIHGMVFD 153 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEE---------CCTTCCEEEEEEC
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEE---------eCCCCcceEEEEC
Confidence 22445789999985 334443 688999999873 44433322100 0122347899999
Q ss_pred CCCCEEEEec-CCCcEEEEEcc-cceee--eeec--CCccceEEEEEcCCCCcEEEEEe-CCCeEEEEeCC--CCeeE--
Q 021247 168 PDGRRIACGS-MDGTISVFDVT-RAKFL--HHLE--GHFMPVRSLVYSPVDPRVLFSAS-DDTHVHMYDAE--GKSLV-- 236 (315)
Q Consensus 168 ~~~~~l~~~s-~dg~i~i~d~~-~~~~~--~~~~--~~~~~v~~~~~~~~~~~~l~s~~-~d~~i~~wd~~--~~~~~-- 236 (315)
|+|++++++. .++.|++||+. +++.. ..+. .|...++.++|+| +++++++++ .++.|.+|+.. ++++.
T Consensus 154 pdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~ 232 (365)
T 1jof_A 154 PTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP-TGNYLYALMEAGNRICEYVIDPATHMPVYT 232 (365)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred CCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEc
Confidence 9999887654 46799999997 66542 2333 2345689999999 455555554 57899998754 44432
Q ss_pred -EEee-------cccc------cEEEEE-EcCCCCeEEEEeCCC------cEEEEecC-ccceeh---cccccccceEEE
Q 021247 237 -TAMS-------GHAS------WVLSVD-ASPDGAAITTGSSDR------TVKLWDLN-MRAAMQ---SMTNHTDQVWGV 291 (315)
Q Consensus 237 -~~~~-------~~~~------~i~~~~-~~~~~~~l~s~~~d~------~i~iwd~~-~~~~~~---~~~~~~~~v~~~ 291 (315)
..+. +|.. .+..++ |+|+|++|+++..+. +|.+|+++ .++... ....+...+..+
T Consensus 233 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~ 312 (365)
T 1jof_A 233 HHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSN 312 (365)
T ss_dssp EEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCC
T ss_pred cceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccc
Confidence 1121 1222 588999 999999887765432 89999996 454332 123344456788
Q ss_pred EEee---CCCEEEEEeCC-CcEEEeec
Q 021247 292 SFRP---LGGRVVSVSDD-KSISLYEY 314 (315)
Q Consensus 292 ~~s~---~~~~l~s~~~d-~~i~i~~~ 314 (315)
+|+| +|++|++++.+ ++|+||++
T Consensus 313 a~sp~~~dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 313 AVSPCPWSDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp CEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred eecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence 9999 89999988865 99999986
No 160
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.90 E-value=9.7e-21 Score=160.36 Aligned_cols=262 Identities=11% Similarity=0.124 Sum_probs=175.6
Q ss_pred cccceEEEEEeecCCCCCcEEEEeeCC----CcEEEEcCCC--Cccee--eccccccceEEEEeCCCCCEEEEee-CCCe
Q 021247 13 HEESVWAVTWVPATETRPALLLTGSLD----ETVKLWRPDD--MQLER--TNTGHCLGVVSVAAHPSGIIAASAS-LDSF 83 (315)
Q Consensus 13 h~~~v~~v~~~~~~~~~~~~l~sgs~d----~~v~~w~~~~--~~~~~--~~~~h~~~v~~~~~~~~g~~l~s~~-~d~~ 83 (315)
|...+..++|+|+++ +|++++.+ +.|.+|+.+. +++.. ....+...+..+++ +|.++++++ .++.
T Consensus 48 ~~~~p~~l~~spdg~----~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~ 121 (361)
T 3scy_A 48 EVANPSYLIPSADGK----FVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGS 121 (361)
T ss_dssp ECSCCCSEEECTTSS----EEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTE
T ss_pred cCCCCceEEECCCCC----EEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCE
Confidence 566777889998765 68888875 7999998754 33322 22334456677777 777666555 6889
Q ss_pred EEEEECCCCceeE----EeeC----------CcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcce------e-----
Q 021247 84 VRVFDVDTNASIA----TLEA----------SPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNL------I----- 138 (315)
Q Consensus 84 i~~w~~~~~~~~~----~~~~----------~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~------~----- 138 (315)
+.+|++.....+. .... ....+..++|+|+++.+++++..++.|.+|++..... +
T Consensus 122 v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~ 201 (361)
T 3scy_A 122 ITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGT 201 (361)
T ss_dssp EEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEE
T ss_pred EEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccc
Confidence 9999997543321 1111 1223578999999998888888889999998875331 1
Q ss_pred -eeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEec-CCCcEEEEEccccee--eeee---cCCccceEEEEEcCC
Q 021247 139 -ATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS-MDGTISVFDVTRAKF--LHHL---EGHFMPVRSLVYSPV 211 (315)
Q Consensus 139 -~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s-~dg~i~i~d~~~~~~--~~~~---~~~~~~v~~~~~~~~ 211 (315)
.....+ ....+..++|+|+|++++++. .++.|.+||+.+++. +..+ ..+......++|+|+
T Consensus 202 ~~~~~~~------------~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spd 269 (361)
T 3scy_A 202 PEAFKVA------------PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPD 269 (361)
T ss_dssp EEEEECC------------TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTT
T ss_pred ccceecC------------CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCC
Confidence 111111 122367899999999886665 689999999986654 2222 223345689999994
Q ss_pred CCcEEE-EEeC-CCeEEEEeCC--CCe--eEEEeecccccEEEEEEcCCCCeEEEEe-CCCcEEEEec--Cccceehcc-
Q 021247 212 DPRVLF-SASD-DTHVHMYDAE--GKS--LVTAMSGHASWVLSVDASPDGAAITTGS-SDRTVKLWDL--NMRAAMQSM- 281 (315)
Q Consensus 212 ~~~~l~-s~~~-d~~i~~wd~~--~~~--~~~~~~~~~~~i~~~~~~~~~~~l~s~~-~d~~i~iwd~--~~~~~~~~~- 281 (315)
+++|+ +... ++.|.+|++. +++ .+..+.. ...+..++|+|+|++|++++ .++.|.+|++ .+++.....
T Consensus 270 -g~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~ 347 (361)
T 3scy_A 270 -GKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKK 347 (361)
T ss_dssp -SSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSC
T ss_pred -CCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecce
Confidence 55554 4445 6899999985 333 3333443 45678999999999888877 6789999755 455544332
Q ss_pred cccccceEEEEEe
Q 021247 282 TNHTDQVWGVSFR 294 (315)
Q Consensus 282 ~~~~~~v~~~~~s 294 (315)
..+...+.++.|.
T Consensus 348 ~~~~~~p~~v~~~ 360 (361)
T 3scy_A 348 DIKVDKPVCLKFV 360 (361)
T ss_dssp CEECSSEEEEEEE
T ss_pred eeeCCCCeEEEEc
Confidence 2344578888886
No 161
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.88 E-value=1.5e-19 Score=151.15 Aligned_cols=249 Identities=14% Similarity=0.138 Sum_probs=184.9
Q ss_pred ccceEEEEeCCCCCEEEEeeCC------------------------CeEEEEECCCCceeEEee-CCcccEEEEEECCCC
Q 021247 60 CLGVVSVAAHPSGIIAASASLD------------------------SFVRVFDVDTNASIATLE-ASPSEVWQMQFDPKG 114 (315)
Q Consensus 60 ~~~v~~~~~~~~g~~l~s~~~d------------------------~~i~~w~~~~~~~~~~~~-~~~~~v~~~~~~~~~ 114 (315)
-..+..++++|+|+++++...+ +.|.+||..+++.+..+. ........++++|++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3568999999999999988777 479999998888766554 233568899999998
Q ss_pred CeEEEEecCCCeEEEEecCCcc-eeeeecCCCCCCCCCCccCCCCcceEEEEECC-CCCEEEEec-CCCcEEEEEcccce
Q 021247 115 TTLAVAGGGSASVKLWDTATWN-LIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP-DGRRIACGS-MDGTISVFDVTRAK 191 (315)
Q Consensus 115 ~~~~~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~s-~dg~i~i~d~~~~~ 191 (315)
+ ++++...++.|++||..... .+..+......+. ...+......++++| +++.+++.+ .++.|++||. .++
T Consensus 103 ~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~----~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~ 176 (329)
T 3fvz_A 103 N-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGS----DQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGK 176 (329)
T ss_dssp C-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCC----STTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSC
T ss_pred C-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCC----CccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCC
Confidence 8 66777888999999986432 3333321111110 012233478999999 788888886 6899999994 566
Q ss_pred eeeeec----------CCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEee--cccccEEEEEEcC------
Q 021247 192 FLHHLE----------GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS--GHASWVLSVDASP------ 253 (315)
Q Consensus 192 ~~~~~~----------~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~--~~~~~i~~~~~~~------ 253 (315)
.+..+. ++......++++|.++.++++...++.|++||..+++.+..+. .+...+.+++++|
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~ 256 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAV 256 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEE
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEe
Confidence 555543 2233478999998658888898899999999998777777663 4556788999999
Q ss_pred CCCeEEEEeCCCcEEEEecCccceehcc---cccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 254 DGAAITTGSSDRTVKLWDLNMRAAMQSM---TNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 254 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
+++..++...+.+|++|+..+++.+..+ ..+...+.+++++|+|..+++...+++|++|+.
T Consensus 257 ~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 257 NGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp ECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred CCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 3333333344558999999988887776 356677999999999987888889999999986
No 162
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.88 E-value=4.3e-19 Score=145.33 Aligned_cols=237 Identities=14% Similarity=0.269 Sum_probs=174.8
Q ss_pred ccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeC------CcccEEEEEEC-CCCCeEEEEec-CCCeEEE
Q 021247 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEA------SPSEVWQMQFD-PKGTTLAVAGG-GSASVKL 129 (315)
Q Consensus 58 ~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~------~~~~v~~~~~~-~~~~~~~~~~~-~d~~i~~ 129 (315)
++-..+..++++++|.++++...++.|++||.. +..+..+.. +...+..++++ +++. ++++.. .++.|.+
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGD-IIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTE-EEEEECGGGCEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCe-EEEEcCCCCCEEEE
Confidence 455678999999999999988889999999987 555555532 23467889994 5554 555553 3789999
Q ss_pred EecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeec--CCccceEEEE
Q 021247 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLE--GHFMPVRSLV 207 (315)
Q Consensus 130 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~ 207 (315)
|| .+++.+..+... ....+..++++|+|+.+++...++.|.+||.. ++....+. .+...+..++
T Consensus 105 ~d-~~g~~~~~~~~~------------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~ 170 (286)
T 1q7f_A 105 YN-QYGQFVRKFGAT------------ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVV 170 (286)
T ss_dssp EC-TTSCEEEEECTT------------TCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEE
T ss_pred EC-CCCcEEEEecCc------------cCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEE
Confidence 99 455655544221 12237899999999988888888999999964 44444443 3445689999
Q ss_pred EcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecc--cccEEEEEEcCCCCeEEEEeCCC-cEEEEecCccceehccccc
Q 021247 208 YSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGH--ASWVLSVDASPDGAAITTGSSDR-TVKLWDLNMRAAMQSMTNH 284 (315)
Q Consensus 208 ~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~s~~~d~-~i~iwd~~~~~~~~~~~~~ 284 (315)
++| +++++++...++.|++||..+. .+..+..+ ...+..++++|+|+++++...++ .|.+|+.. ++.+..+..+
T Consensus 171 ~~~-~g~l~v~~~~~~~i~~~~~~g~-~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~ 247 (286)
T 1q7f_A 171 VND-KQEIFISDNRAHCVKVFNYEGQ-YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESK 247 (286)
T ss_dssp ECS-SSEEEEEEGGGTEEEEEETTCC-EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEES
T ss_pred ECC-CCCEEEEECCCCEEEEEcCCCC-EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEccc
Confidence 998 5678888888999999998654 44444332 36789999999999888888776 99999964 5555555444
Q ss_pred c--cceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 285 T--DQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 285 ~--~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
. ..+.+++++|+|+.+++ +.|++|++|++
T Consensus 248 ~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~ 278 (286)
T 1q7f_A 248 VKHAQCFDVALMDDGSVVLA-SKDYRLYIYRY 278 (286)
T ss_dssp SCCSCEEEEEEETTTEEEEE-ETTTEEEEEEC
T ss_pred CCCCcceeEEECCCCcEEEE-CCCCeEEEEEc
Confidence 3 34789999999976666 67999999987
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.88 E-value=1e-21 Score=181.19 Aligned_cols=232 Identities=12% Similarity=0.110 Sum_probs=165.2
Q ss_pred EEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcc---cEEEEEECCCCCeEEEEec--------CCCeEEEEecC
Q 021247 65 SVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPS---EVWQMQFDPKGTTLAVAGG--------GSASVKLWDTA 133 (315)
Q Consensus 65 ~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~--------~d~~i~~~d~~ 133 (315)
++.|+|+|.++++ +.|++|++||+.+++....+..+.. .+..++|+|+|+.++++.. .+++|++||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 6789999966554 4699999999999987766655433 3889999999998776543 26899999998
Q ss_pred CcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeee-cCCccce---------
Q 021247 134 TWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHL-EGHFMPV--------- 203 (315)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~-~~~~~~v--------- 203 (315)
+++.+....+. ..+..++|+|||+.|+.+. ++.|++||+.+++..... .++...+
T Consensus 99 ~g~~~~~~~l~--------------~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~ 163 (719)
T 1z68_A 99 NGEFVRGNELP--------------RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVY 163 (719)
T ss_dssp TTEECCSSCCC--------------SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHH
T ss_pred CCccccceecC--------------cccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEccccccee
Confidence 87652111111 2367899999999999885 789999999877654322 2222222
Q ss_pred --------EEEEEcCCCCcEEEEEeCCC----------------------------------eEEEEeCCCCeeE---E-
Q 021247 204 --------RSLVYSPVDPRVLFSASDDT----------------------------------HVHMYDAEGKSLV---T- 237 (315)
Q Consensus 204 --------~~~~~~~~~~~~l~s~~~d~----------------------------------~i~~wd~~~~~~~---~- 237 (315)
..+.|+| +++.|+.++.|. .|++||+.+++.. .
T Consensus 164 ~ee~~~~~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~ 242 (719)
T 1z68_A 164 EEEMLATKYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEV 242 (719)
T ss_dssp HHHTTCSSCCEEECT-TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEEC
T ss_pred eeecccCcccEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEc
Confidence 4799999 566777766442 7889999887642 1
Q ss_pred ----EeecccccEEEEEEcCCCCeEEEEeCC----CcEEEEe----cCccceehcc----cccccceE-----EEEEeeC
Q 021247 238 ----AMSGHASWVLSVDASPDGAAITTGSSD----RTVKLWD----LNMRAAMQSM----TNHTDQVW-----GVSFRPL 296 (315)
Q Consensus 238 ----~~~~~~~~i~~~~~~~~~~~l~s~~~d----~~i~iwd----~~~~~~~~~~----~~~~~~v~-----~~~~s~~ 296 (315)
.+.+|...+..++|+|+++++++.... ..|.+|| +.+++....+ ..|...+. .+.|+||
T Consensus 243 ~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spd 322 (719)
T 1z68_A 243 PVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYD 322 (719)
T ss_dssp CCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTT
T ss_pred cCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCC
Confidence 123578889999999998877774432 2488899 7777766655 36666666 7899999
Q ss_pred CCEEEE--EeCCCcEEEee
Q 021247 297 GGRVVS--VSDDKSISLYE 313 (315)
Q Consensus 297 ~~~l~s--~~~d~~i~i~~ 313 (315)
|+.|+. ...+|..+||-
T Consensus 323 g~~l~~~~~~~~g~~~l~~ 341 (719)
T 1z68_A 323 AISYYKIFSDKDGYKHIHY 341 (719)
T ss_dssp SSCEEEEEECTTSCEEEEE
T ss_pred CCeEEEEEEccCCceEEEE
Confidence 996654 44566555553
No 164
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.87 E-value=6.7e-21 Score=163.02 Aligned_cols=278 Identities=12% Similarity=0.054 Sum_probs=178.1
Q ss_pred cceEEEEEeecCCCCCcEEEEe-eCC--CcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCC
Q 021247 15 ESVWAVTWVPATETRPALLLTG-SLD--ETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91 (315)
Q Consensus 15 ~~v~~v~~~~~~~~~~~~l~sg-s~d--~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~ 91 (315)
..+..++|+|+++ .|+.. ..+ ..|.+|+..+.+......++......+.|+|+|+.|+.++.++.|++||+.+
T Consensus 36 ~~~~~~~~SpdG~----~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~ 111 (396)
T 3c5m_A 36 NYFYQKCFTQDGK----KLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLET 111 (396)
T ss_dssp CCTTSCCBCTTSC----EEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTT
T ss_pred eeeecCcCCCCCC----EEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCC
Confidence 3477888999876 34444 333 3678888877665444333332233377999999999999999999999998
Q ss_pred CceeEEeeCCcccEEE-------------------EEECCCCCeEEEEe----cCCCeEEEEecCCcceeeeecCCCCCC
Q 021247 92 NASIATLEASPSEVWQ-------------------MQFDPKGTTLAVAG----GGSASVKLWDTATWNLIATLSIPRPEG 148 (315)
Q Consensus 92 ~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~~~~~----~~d~~i~~~d~~~~~~~~~~~~~~~~~ 148 (315)
++.......+...... +.++|+++.+++.. ..+..|.+||+.+++......
T Consensus 112 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~------ 185 (396)
T 3c5m_A 112 LEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ------ 185 (396)
T ss_dssp CCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE------
T ss_pred CCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc------
Confidence 8765554433321111 24567766554332 456789999998766543321
Q ss_pred CCCCccCCCCcceEEEEECC-CCCEEEEecCC------CcEEEEEcccceeeeeecCC-ccceEEEEEcCCCCcEEEEEe
Q 021247 149 LKPTDKSSSKKFVLSVAWSP-DGRRIACGSMD------GTISVFDVTRAKFLHHLEGH-FMPVRSLVYSPVDPRVLFSAS 220 (315)
Q Consensus 149 ~~~~~~~~~~~~i~~~~~~~-~~~~l~~~s~d------g~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~ 220 (315)
+...+..+.|+| +++.|+..+.+ ..|.+||+..++........ ...+..+.|+|++..+++.+.
T Consensus 186 --------~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~ 257 (396)
T 3c5m_A 186 --------DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSY 257 (396)
T ss_dssp --------ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEE
T ss_pred --------CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEec
Confidence 122377899999 78877665443 46888998765433222211 235778899995444444433
Q ss_pred CC----CeEEEEeCCCCeeEEEeecccccEEEEEEcC-CCCeEEEEe----------------CCCcEEEEecCccceeh
Q 021247 221 DD----THVHMYDAEGKSLVTAMSGHASWVLSVDASP-DGAAITTGS----------------SDRTVKLWDLNMRAAMQ 279 (315)
Q Consensus 221 ~d----~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~~----------------~d~~i~iwd~~~~~~~~ 279 (315)
.+ +.|++||+.+++...... ... .. +.|+| +|++++.++ .+..|++||+..++. .
T Consensus 258 ~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~ 333 (396)
T 3c5m_A 258 FKGQTDRVIYKANPETLENEEVMV-MPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-Q 333 (396)
T ss_dssp ETTTCCEEEEEECTTTCCEEEEEE-CCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-C
T ss_pred CCCCccceEEEEECCCCCeEEeee-CCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-E
Confidence 22 459999998775443222 111 23 88999 999888765 347899999987654 3
Q ss_pred ccccccc-----------ceEEEEEeeCCCEEEEEeC-CCcEEEeec
Q 021247 280 SMTNHTD-----------QVWGVSFRPLGGRVVSVSD-DKSISLYEY 314 (315)
Q Consensus 280 ~~~~~~~-----------~v~~~~~s~~~~~l~s~~~-d~~i~i~~~ 314 (315)
.+..+.. .+..++|+|+|++|+.++. ++...||.+
T Consensus 334 ~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 334 KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEE
Confidence 3444433 2556789999999887665 567777754
No 165
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.87 E-value=1.9e-19 Score=152.41 Aligned_cols=256 Identities=13% Similarity=0.140 Sum_probs=174.2
Q ss_pred CCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEee----------CCCeEEEEECCCCceeEEeeCC------
Q 021247 38 LDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASAS----------LDSFVRVFDVDTNASIATLEAS------ 101 (315)
Q Consensus 38 ~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~----------~d~~i~~w~~~~~~~~~~~~~~------ 101 (315)
.|+.|.+||..+.++...++.+..+ .+.++|+|++++++. .+++|.+||..+.+.+..+...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 4789999999888887777666555 899999999888775 3678999999988887776532
Q ss_pred cccEEEEEECCCCCeEEEEecC-CCeEEEEecCCcceeee-ecCCCCCC--CCCCc-----cCCCCcceEEEEEC-----
Q 021247 102 PSEVWQMQFDPKGTTLAVAGGG-SASVKLWDTATWNLIAT-LSIPRPEG--LKPTD-----KSSSKKFVLSVAWS----- 167 (315)
Q Consensus 102 ~~~v~~~~~~~~~~~~~~~~~~-d~~i~~~d~~~~~~~~~-~~~~~~~~--~~~~~-----~~~~~~~i~~~~~~----- 167 (315)
......++++|++++++++... ++.|.+||+.+.+.+.. +..+...+ ..+.. .......+..+.+.
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~ 186 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKV 186 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSE
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcE
Confidence 2335578999999988877654 68999999999888776 54321100 00000 00000001111111
Q ss_pred ----------------------CCCCEEEEecCCCcEEEEEccccee--eeeecC------C----ccceEEEEEcCCCC
Q 021247 168 ----------------------PDGRRIACGSMDGTISVFDVTRAKF--LHHLEG------H----FMPVRSLVYSPVDP 213 (315)
Q Consensus 168 ----------------------~~~~~l~~~s~dg~i~i~d~~~~~~--~~~~~~------~----~~~v~~~~~~~~~~ 213 (315)
+++..++..+.++.+.++|+..... ...+.. + ......++|+|++.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~ 266 (361)
T 2oiz_A 187 ASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASG 266 (361)
T ss_dssp EEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTT
T ss_pred eeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCC
Confidence 1223334444566677777653321 111110 0 00111267888656
Q ss_pred cEEEEEe----------CCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCcc--ceehcc
Q 021247 214 RVLFSAS----------DDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMR--AAMQSM 281 (315)
Q Consensus 214 ~~l~s~~----------~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--~~~~~~ 281 (315)
+++++.. ..+.|.+||.++++.+..+..+. +.+++|+|+|++|++++. ++|.+||..++ +.+.++
T Consensus 267 ~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 267 RMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTI 343 (361)
T ss_dssp EEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEE
T ss_pred eEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEe
Confidence 5555544 13589999999999999888776 899999999999998886 99999999999 888887
Q ss_pred cccccceEEEEEeeCCC
Q 021247 282 TNHTDQVWGVSFRPLGG 298 (315)
Q Consensus 282 ~~~~~~v~~~~~s~~~~ 298 (315)
..+....+.++++|+|+
T Consensus 344 ~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 344 EGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TTSCSSEEEEEECCCSC
T ss_pred ccCCCCcEEEEecCCCC
Confidence 66778889999999986
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.87 E-value=2.3e-18 Score=143.98 Aligned_cols=252 Identities=12% Similarity=0.155 Sum_probs=185.1
Q ss_pred cccceEEEEEeecCCCCCcEEEEeeCC------------------------CcEEEEcCCCCcceeecc-ccccceEEEE
Q 021247 13 HEESVWAVTWVPATETRPALLLTGSLD------------------------ETVKLWRPDDMQLERTNT-GHCLGVVSVA 67 (315)
Q Consensus 13 h~~~v~~v~~~~~~~~~~~~l~sgs~d------------------------~~v~~w~~~~~~~~~~~~-~h~~~v~~~~ 67 (315)
--..|.+|++.|.++ ++++.+.+ +.|.+||.++.++..... ++-..+..++
T Consensus 22 ~l~~v~~va~d~~G~----l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia 97 (329)
T 3fvz_A 22 LPGQVSGVALDSKNN----LVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLS 97 (329)
T ss_dssp CCSCEEEEEECTTCC----EEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEE
T ss_pred ecCCceEEEECCCCC----EEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEE
Confidence 346799999998765 56776666 479999998777765543 4445788999
Q ss_pred eCCCCCEEEEeeCCCeEEEEECCCCc-eeEEee---------CCcccEEEEEECCCCCeEEEEec-CCCeEEEEecCCcc
Q 021247 68 AHPSGIIAASASLDSFVRVFDVDTNA-SIATLE---------ASPSEVWQMQFDPKGTTLAVAGG-GSASVKLWDTATWN 136 (315)
Q Consensus 68 ~~~~g~~l~s~~~d~~i~~w~~~~~~-~~~~~~---------~~~~~v~~~~~~~~~~~~~~~~~-~d~~i~~~d~~~~~ 136 (315)
++++|.++++...++.|++|+..... .+..+. .+......++++|++..++++.+ .++.|++|| ..++
T Consensus 98 ~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~ 176 (329)
T 3fvz_A 98 IDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGK 176 (329)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSC
T ss_pred ECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCC
Confidence 99999999998889999999986553 444442 23346889999994444666765 689999999 4556
Q ss_pred eeeeecCCCCCCCCCCccCCCCcceEEEEECCC-CCEEEEecCCCcEEEEEcccceeeeeec--CCccceEEEEEcCCCC
Q 021247 137 LIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD-GRRIACGSMDGTISVFDVTRAKFLHHLE--GHFMPVRSLVYSPVDP 213 (315)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~s~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~ 213 (315)
.+..+....... ............++++|+ ++.+++...++.|++||+.+++.+..+. .+...+..++|+| +
T Consensus 177 ~~~~~~~~g~~~---~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p--g 251 (329)
T 3fvz_A 177 FVTQWGEESSGS---SPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP--G 251 (329)
T ss_dssp EEEEECEECCSS---SCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET--T
T ss_pred EEEEeccCCCCC---CCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC--C
Confidence 655553211100 000112234789999998 7777888889999999998888877764 3556788899998 3
Q ss_pred cEEEEEe-------CCCeEEEEeCCCCeeEEEee---cccccEEEEEEcCCCCeEEEEeCCCcEEEEecCc
Q 021247 214 RVLFSAS-------DDTHVHMYDAEGKSLVTAMS---GHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274 (315)
Q Consensus 214 ~~l~s~~-------~d~~i~~wd~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 274 (315)
..+.+.+ .+..|++||..+++++..+. ++...+..++++|+|.++++...+++|++|++..
T Consensus 252 ~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 252 FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 3333333 34589999999888887763 5677799999999998889999999999999864
No 167
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.87 E-value=5e-20 Score=170.29 Aligned_cols=286 Identities=13% Similarity=0.177 Sum_probs=189.0
Q ss_pred ccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccc-----eEEEEeCCCCCEEEEeeCC-----
Q 021247 12 AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLG-----VVSVAAHPSGIIAASASLD----- 81 (315)
Q Consensus 12 ~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~-----v~~~~~~~~g~~l~s~~~d----- 81 (315)
.+....+.++|+|++. +++++ |++|++|+..+++....+.+|... ...+.++|||++|+.++.+
T Consensus 14 ~~~~~~~~~~w~~dg~----~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r 87 (740)
T 4a5s_A 14 TYRLKLYSLRWISDHE----YLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWR 87 (740)
T ss_dssp CSCCCCCCEEECSSSE----EEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSS
T ss_pred cccccccccEECCCCc----EEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEE
Confidence 4556788999999874 67775 999999999988877666666543 2347889999999988876
Q ss_pred ----CeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCC
Q 021247 82 ----SFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSS 157 (315)
Q Consensus 82 ----~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (315)
+.+.+||+.+++.. .+..+...+...+|+|+|+.++++ .++.|++||+.+++..... ....... ...++
T Consensus 88 ~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~--~~~~i~~~~~~~~~~~~lt-~~g~~~~---~~~g~ 160 (740)
T 4a5s_A 88 HSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV--WNNDIYVKIEPNLPSYRIT-WTGKEDI---IYNGI 160 (740)
T ss_dssp SCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE--ETTEEEEESSTTSCCEECC-SCCBTTT---EEESB
T ss_pred EccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE--ECCeEEEEECCCCceEEEc-CCCCccc---eecCc
Confidence 55679999998754 355566789999999999988765 4689999999877644321 1111000 00011
Q ss_pred C---------cceEEEEECCCCCEEEEecCCC------------------------------------cEEEEEccc---
Q 021247 158 K---------KFVLSVAWSPDGRRIACGSMDG------------------------------------TISVFDVTR--- 189 (315)
Q Consensus 158 ~---------~~i~~~~~~~~~~~l~~~s~dg------------------------------------~i~i~d~~~--- 189 (315)
. .....+.|+|||+.|+..+.|. .|++||+.+
T Consensus 161 ~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~ 240 (740)
T 4a5s_A 161 TDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSS 240 (740)
T ss_dssp CCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCS
T ss_pred ccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCC
Confidence 1 1124589999999998764221 488899987
Q ss_pred ce--eeeeec------CCccceEEEEEcCCCCcEEEEEe----CCCeEEEEeCCCCe----e--EEEe--ecccccEE--
Q 021247 190 AK--FLHHLE------GHFMPVRSLVYSPVDPRVLFSAS----DDTHVHMYDAEGKS----L--VTAM--SGHASWVL-- 247 (315)
Q Consensus 190 ~~--~~~~~~------~~~~~v~~~~~~~~~~~~l~s~~----~d~~i~~wd~~~~~----~--~~~~--~~~~~~i~-- 247 (315)
+. ....+. +|...+..++|+| ++++++... .+..|++||..+++ + +..+ ..|..++.
T Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~wsp-dg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~ 319 (740)
T 4a5s_A 241 VTNATSIQITAPASMLIGDHYLCDVTWAT-QERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRF 319 (740)
T ss_dssp SSCCCEEEECCCHHHHTSCEEEEEEEEEE-TTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSS
T ss_pred CCcceEEEecCCccCCCCCeEEEEEEEeC-CCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccC
Confidence 62 122232 3677789999999 456555443 23479999988765 1 1111 45666654
Q ss_pred ---EEEEcCCCCeEE-EEe-CCC--cEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCC-----CcEEEee
Q 021247 248 ---SVDASPDGAAIT-TGS-SDR--TVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDD-----KSISLYE 313 (315)
Q Consensus 248 ---~~~~~~~~~~l~-s~~-~d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----~~i~i~~ 313 (315)
...|+|||+.++ ..+ .+| .|++|++..+.... +....-.+..+. .++++.|+..+.. +...||.
T Consensus 320 ~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~g~~~v~~~~-~~d~~~i~f~~~~~~~~~~~~~ly~ 395 (740)
T 4a5s_A 320 RPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-ITKGTWEVIGIE-ALTSDYLYYISNEYKGMPGGRNLYK 395 (740)
T ss_dssp SCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE-SCCSSSCEEEEE-EECSSEEEEEESCGGGCTTCBEEEE
T ss_pred cCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe-cccCCEEEEEEE-EEeCCEEEEEEecCCCCCceeEEEE
Confidence 688999999766 554 344 58888888655443 333344555543 3557777655443 4555654
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.87 E-value=6.1e-20 Score=167.73 Aligned_cols=284 Identities=14% Similarity=0.075 Sum_probs=187.6
Q ss_pred hhhccccceEEEEEeecCCCCCcEEEEe--eCCCcEEEEcCCCCcceeeccccccceE---------EEEe--CCCCCE-
Q 021247 9 VENAHEESVWAVTWVPATETRPALLLTG--SLDETVKLWRPDDMQLERTNTGHCLGVV---------SVAA--HPSGII- 74 (315)
Q Consensus 9 ~~~~h~~~v~~v~~~~~~~~~~~~l~sg--s~d~~v~~w~~~~~~~~~~~~~h~~~v~---------~~~~--~~~g~~- 74 (315)
.+.+|...+..++|++.. .++++. +.++...||........+.+..|...+. ...+ +|+|+.
T Consensus 18 ~~~~~~~~~~~~~~s~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~ 93 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDE----VWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPL 93 (662)
T ss_dssp HHHHTCSCCEEEEEETTE----EEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCE
T ss_pred HHhhcCCccceeEEcCCe----EEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeE
Confidence 356899999999999643 255665 5578899998543333444555544444 4434 499987
Q ss_pred EEEeeC-CCeEEEEECC--CCceeEEeeC-----CcccEEEEEECCCCCeEEEEecCC---------CeEEEEecCC---
Q 021247 75 AASASL-DSFVRVFDVD--TNASIATLEA-----SPSEVWQMQFDPKGTTLAVAGGGS---------ASVKLWDTAT--- 134 (315)
Q Consensus 75 l~s~~~-d~~i~~w~~~--~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~d---------~~i~~~d~~~--- 134 (315)
|+.++. +..|+++++. .......+.. +...+..++|+|+|+.++++.... .+|.+||+.+
T Consensus 94 la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 94 LVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp EEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred EEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 665443 5667777765 2033444444 456788999999999887655321 5899999876
Q ss_pred ---cceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCC--------CcEEEEEcc-cc---eeeeeecCC
Q 021247 135 ---WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMD--------GTISVFDVT-RA---KFLHHLEGH 199 (315)
Q Consensus 135 ---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~d--------g~i~i~d~~-~~---~~~~~~~~~ 199 (315)
++.. .+.. .+...+..++|+|||++|+..+.+ ..|++||+. ++ +.......+
T Consensus 174 ~~~~~~~-~l~~------------~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~ 240 (662)
T 3azo_A 174 ADRSAVR-ELSD------------DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP 240 (662)
T ss_dssp TCGGGSE-ESSC------------SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET
T ss_pred ccCCcee-EEEe------------cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC
Confidence 4332 1110 122356788999999999877644 479999998 56 433334445
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCC--eEEEEeCCCCeeEEEeeccccc--------EEEEEEcCCCCeEEEEeCCCcEEE
Q 021247 200 FMPVRSLVYSPVDPRVLFSASDDT--HVHMYDAEGKSLVTAMSGHASW--------VLSVDASPDGAAITTGSSDRTVKL 269 (315)
Q Consensus 200 ~~~v~~~~~~~~~~~~l~s~~~d~--~i~~wd~~~~~~~~~~~~~~~~--------i~~~~~~~~~~~l~s~~~d~~i~i 269 (315)
...+..+.|+|++ ++++++..++ .|.+||..+++.......+... +..++++|++++++++.. +.+++
T Consensus 241 ~~~~~~~~~spdg-~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l 318 (662)
T 3azo_A 241 EEAIAQAEWAPDG-SLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVL 318 (662)
T ss_dssp TBCEEEEEECTTS-CEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEE
T ss_pred CceEcceEECCCC-eEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEE
Confidence 6788999999954 5888888888 6777887666554433333222 457889999999999998 99999
Q ss_pred E--ecCccceehcccccccceEEEEEeeCCCEE--EEEeCCCcEEEee
Q 021247 270 W--DLNMRAAMQSMTNHTDQVWGVSFRPLGGRV--VSVSDDKSISLYE 313 (315)
Q Consensus 270 w--d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l--~s~~~d~~i~i~~ 313 (315)
| |+..++ +..+..|...+..+. ++++..+ ++.+.+....||.
T Consensus 319 ~~~d~~~~~-~~~l~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 319 GILDPESGE-LVDAAGPWTEWAATL-TVSGTRAVGVAASPRTAYEVVE 364 (662)
T ss_dssp EEEETTTTE-EEECCSSCCEEEEEE-EEETTEEEEEEEETTEEEEEEE
T ss_pred EEEECCCCc-EEEecCCCCeEEEEE-ecCCCEEEEEEcCCCCCCEEEE
Confidence 9 554444 566677777777662 5555544 4556665555554
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.86 E-value=2.3e-19 Score=152.25 Aligned_cols=243 Identities=12% Similarity=0.092 Sum_probs=165.0
Q ss_pred cceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCC-CCcceeeccccc--cceEEEEeCCCCCE--EEEee----------
Q 021247 15 ESVWAVTWVPATETRPALLLTGSLDETVKLWRPD-DMQLERTNTGHC--LGVVSVAAHPSGII--AASAS---------- 79 (315)
Q Consensus 15 ~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~-~~~~~~~~~~h~--~~v~~~~~~~~g~~--l~s~~---------- 79 (315)
..+..++|+|+++ +|++++.+ .|.+|+.+ ++++..... +. ..+..+.++|+|++ ++++.
T Consensus 40 ~~~~~~a~spdg~----~l~~~~~~-~v~~~~~~~~g~~~~~~~-~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 113 (365)
T 1jof_A 40 EPISWMTFDHERK----NIYGAAMK-KWSSFAVKSPTEIVHEAS-HPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANP 113 (365)
T ss_dssp CCCSEEEECTTSS----EEEEEEBT-EEEEEEEEETTEEEEEEE-EECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEE
T ss_pred CCCcEEEECCCCC----EEEEEccc-eEEEEEECCCCCEEEeeE-eecCCCCccEEECCCCCEEEEEEecCCcceeccce
Confidence 4677899998775 68888888 99999986 555543221 11 22455889999984 45553
Q ss_pred ---CCCeEEEEECCC-CceeEEee----CCcccEEEEEECCCCCeEEEEecCCCeEEEEecC-Ccceee--eecCCCCCC
Q 021247 80 ---LDSFVRVFDVDT-NASIATLE----ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTA-TWNLIA--TLSIPRPEG 148 (315)
Q Consensus 80 ---~d~~i~~w~~~~-~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~-~~~~~~--~~~~~~~~~ 148 (315)
.++++++|++.. ++....+. .+...+..++|+|+|+.++++...++.|.+||+. +++... .+..+.
T Consensus 114 ~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~--- 190 (365)
T 1jof_A 114 FYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPD--- 190 (365)
T ss_dssp ESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSS---
T ss_pred eecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCC---
Confidence 689999999974 54433333 2446788999999999877766667899999997 555432 121110
Q ss_pred CCCCccCCCCcceEEEEECCCCCEEEEec-CCCcEEEEEcc--cceee---eee---c----CCcc------ceEEEE-E
Q 021247 149 LKPTDKSSSKKFVLSVAWSPDGRRIACGS-MDGTISVFDVT--RAKFL---HHL---E----GHFM------PVRSLV-Y 208 (315)
Q Consensus 149 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~s-~dg~i~i~d~~--~~~~~---~~~---~----~~~~------~v~~~~-~ 208 (315)
+...+..++|+|+|++++++. .++.|.+|++. +++.. ..+ . +|.. .+..++ |
T Consensus 191 --------~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~ 262 (365)
T 1jof_A 191 --------PGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCAL 262 (365)
T ss_dssp --------TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEE
T ss_pred --------CCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEE
Confidence 112378899999999887765 47899999764 45432 112 1 1222 478899 9
Q ss_pred cCCCCcEEEEEeC-CC-----eEEEEeCC-CCeeEE---EeecccccEEEEEEcC---CCCeEEEEeCC-CcEEEEecCc
Q 021247 209 SPVDPRVLFSASD-DT-----HVHMYDAE-GKSLVT---AMSGHASWVLSVDASP---DGAAITTGSSD-RTVKLWDLNM 274 (315)
Q Consensus 209 ~~~~~~~l~s~~~-d~-----~i~~wd~~-~~~~~~---~~~~~~~~i~~~~~~~---~~~~l~s~~~d-~~i~iwd~~~ 274 (315)
+| ++++|+++.. +. .|.+|++. ++++.. ....+...+..++|+| +|++|++++.+ +.|++|+++.
T Consensus 263 sp-dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 263 TF-SGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp CT-TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred CC-CCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 99 4555555543 33 89999985 455433 1333444566789999 89999988875 8999999875
Q ss_pred c
Q 021247 275 R 275 (315)
Q Consensus 275 ~ 275 (315)
.
T Consensus 342 ~ 342 (365)
T 1jof_A 342 E 342 (365)
T ss_dssp T
T ss_pred h
Confidence 4
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.85 E-value=2.2e-17 Score=135.08 Aligned_cols=242 Identities=12% Similarity=0.212 Sum_probs=175.5
Q ss_pred hccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeecc------ccccceEEEEe-CCCCCEEEEeeC-CC
Q 021247 11 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNT------GHCLGVVSVAA-HPSGIIAASASL-DS 82 (315)
Q Consensus 11 ~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~------~h~~~v~~~~~-~~~g~~l~s~~~-d~ 82 (315)
.+|-..+.++++.|.+. ++++...++.|.+|+.+ .+....+. ++...+..+++ .++|.++++... ++
T Consensus 26 ~g~~~~p~~v~~~~~g~----l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~ 100 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQND----IIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTH 100 (286)
T ss_dssp TTCBSCEEEEEECTTCC----EEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGC
T ss_pred CCccCCCceEEECCCCC----EEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCC
Confidence 46667899999988653 67777889999999986 44433332 34457889999 578887777643 88
Q ss_pred eEEEEECCCCceeEEeeC-CcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcce
Q 021247 83 FVRVFDVDTNASIATLEA-SPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFV 161 (315)
Q Consensus 83 ~i~~w~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 161 (315)
.|++|+ .+++.+..+.. ....+..++++|+++ ++++...++.|.+||.. ++.+..+... .....+
T Consensus 101 ~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~-----------~~~~~p 166 (286)
T 1q7f_A 101 QIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQN-GNVLHKFGCS-----------KHLEFP 166 (286)
T ss_dssp EEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEEEEECT-----------TTCSSE
T ss_pred EEEEEC-CCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCC-CCEEEEeCCC-----------CccCCc
Confidence 999999 55666655543 335688999999987 56676778899999964 4444444211 112237
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCC--ccceEEEEEcCCCCcEEEEEeCCC-eEEEEeCCCCeeEEE
Q 021247 162 LSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGH--FMPVRSLVYSPVDPRVLFSASDDT-HVHMYDAEGKSLVTA 238 (315)
Q Consensus 162 ~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~d~-~i~~wd~~~~~~~~~ 238 (315)
..++++++|+.+++.+.++.|++||.. ++.+..+..+ ...+..++++| +++++++...++ .|.+||..+ +.+..
T Consensus 167 ~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~~g-~~~~~ 243 (286)
T 1q7f_A 167 NGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQDG-QLISA 243 (286)
T ss_dssp EEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECTTS-CEEEE
T ss_pred EEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECC-CCCEEEEeCCCCEEEEEECCCC-CEEEE
Confidence 899999999988888889999999974 4455555432 35688999998 567888887776 999999654 44455
Q ss_pred eeccc--ccEEEEEEcCCCCeEEEEeCCCcEEEEecCcc
Q 021247 239 MSGHA--SWVLSVDASPDGAAITTGSSDRTVKLWDLNMR 275 (315)
Q Consensus 239 ~~~~~--~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 275 (315)
+..+. ..+.+++++|+|+++++ +.|++|++|++...
T Consensus 244 ~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 244 LESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred EcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 54433 34789999999987777 67999999998654
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.85 E-value=2.4e-18 Score=143.91 Aligned_cols=270 Identities=9% Similarity=0.034 Sum_probs=185.8
Q ss_pred cceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCce
Q 021247 15 ESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNAS 94 (315)
Q Consensus 15 ~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~ 94 (315)
..|+++.|.|.... ++..+.++.++.|. .+....+..+...+..+.++++|.+++++..++.|++||..+++.
T Consensus 6 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~ 78 (333)
T 2dg1_A 6 QDLPTLFYSGKSNS----AVPIISESELQTIT---AEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI 78 (333)
T ss_dssp CCCCBCCSCGGGGC----SSCCCCGGGSCEEE---CEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCE
T ss_pred cccceeeecCCccc----eeEEeecccCcccc---cceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcE
Confidence 45788888887653 45557788999993 233344455556678999999999888888899999999988776
Q ss_pred eEEeeCCcccEEEEEECCCCCeEEEEecCC----CeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCC
Q 021247 95 IATLEASPSEVWQMQFDPKGTTLAVAGGGS----ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDG 170 (315)
Q Consensus 95 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 170 (315)
......+...+..++++|+++.+ ++...+ +.|.+||..+.+....+... .....+..++++|+|
T Consensus 79 ~~~~~~~~~~~~~i~~~~dg~l~-v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-----------~~~~~~~~i~~d~~g 146 (333)
T 2dg1_A 79 KRPFVSHKANPAAIKIHKDGRLF-VCYLGDFKSTGGIFAATENGDNLQDIIEDL-----------STAYCIDDMVFDSKG 146 (333)
T ss_dssp EEEEECSSSSEEEEEECTTSCEE-EEECTTSSSCCEEEEECTTSCSCEEEECSS-----------SSCCCEEEEEECTTS
T ss_pred EEEeeCCCCCcceEEECCCCcEE-EEeCCCCCCCceEEEEeCCCCEEEEEEccC-----------ccCCcccceEECCCC
Confidence 55443456779999999998744 454444 68999998776543222110 012347899999999
Q ss_pred CEEEEecC------CCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCC-CeeEEE-----
Q 021247 171 RRIACGSM------DGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG-KSLVTA----- 238 (315)
Q Consensus 171 ~~l~~~s~------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~----- 238 (315)
+.+++... .+.|..+|..+++... +..+...+..++|+|++..++++...++.|.+||.+. +..+..
T Consensus 147 ~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~ 225 (333)
T 2dg1_A 147 GFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATI 225 (333)
T ss_dssp CEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEE
T ss_pred CEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceE
Confidence 87776654 3567777766544332 2223345788999985444566666788999999853 222211
Q ss_pred ---eecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehccccccc------ceEEEEEeeCCCEEEEEeCC
Q 021247 239 ---MSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTD------QVWGVSFRPLGGRVVSVSDD 306 (315)
Q Consensus 239 ---~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~------~v~~~~~s~~~~~l~s~~~d 306 (315)
..++ ..+..++++++|+++++...++.|.+||.+ ++.+..+..+.. .+.+++|+|+++.|+.++.+
T Consensus 226 ~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 226 PYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 1122 367889999999988888788999999984 555544443322 68899999998877655554
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.84 E-value=4.7e-18 Score=142.89 Aligned_cols=259 Identities=14% Similarity=0.129 Sum_probs=172.0
Q ss_pred cccceEEEEEeecCCCCCcEEEEe--------eCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCC---
Q 021247 13 HEESVWAVTWVPATETRPALLLTG--------SLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLD--- 81 (315)
Q Consensus 13 h~~~v~~v~~~~~~~~~~~~l~sg--------s~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d--- 81 (315)
.-..+..+++ ++. .++++. +.++.|.+|+.++.+... + ..+..+.|+|+|+.|+.++.+
T Consensus 13 ~~~~~~~~~~--dG~---~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~ 82 (347)
T 2gop_A 13 KFAYLSDPRT--KGE---LVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEK 82 (347)
T ss_dssp CSCEEEEEEE--ETT---EEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTT
T ss_pred eeEEcccceE--CCc---EEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCC
Confidence 3456677777 333 123322 236779999987765433 2 467889999999988877654
Q ss_pred C--eEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecC--------------------------CCeEEEEecC
Q 021247 82 S--FVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGG--------------------------SASVKLWDTA 133 (315)
Q Consensus 82 ~--~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--------------------------d~~i~~~d~~ 133 (315)
+ .|++|++.+++........ . +..++|+|+++.++++... ...|.+||+.
T Consensus 83 ~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~ 160 (347)
T 2gop_A 83 KVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTE 160 (347)
T ss_dssp TEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETT
T ss_pred CcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECC
Confidence 2 4888888887665544433 3 8899999999988776532 3578999998
Q ss_pred CcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCC---------CcEEEEEcccceeeeeecCCccceE
Q 021247 134 TWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMD---------GTISVFDVTRAKFLHHLEGHFMPVR 204 (315)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~d---------g~i~i~d~~~~~~~~~~~~~~~~v~ 204 (315)
+++.+..+..+ .+..++|+|+| .++++..+ ..|.++| +++. ..+..+ ..+.
T Consensus 161 ~~~~~~~l~~~---------------~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~~-~~~~ 220 (347)
T 2gop_A 161 SEEVIEEFEKP---------------RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKE-EKMFEK-VSFY 220 (347)
T ss_dssp TTEEEEEEEEE---------------TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEE-EEEEEE-ESEE
T ss_pred CCeEEeeecCC---------------CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCce-EEeccC-ccee
Confidence 77653333211 25688999999 77766543 2355555 4443 333333 4444
Q ss_pred EEEEcCCCCcEEEEEeCC--------CeEEEEeCCCCeeEEEeecccccEEE-EEEcCCCCeEEEEeCCCcEEEEecCcc
Q 021247 205 SLVYSPVDPRVLFSASDD--------THVHMYDAEGKSLVTAMSGHASWVLS-VDASPDGAAITTGSSDRTVKLWDLNMR 275 (315)
Q Consensus 205 ~~~~~~~~~~~l~s~~~d--------~~i~~wd~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~s~~~d~~i~iwd~~~~ 275 (315)
.+ +| +++.|+.++.+ ..|.+|| +++.......+...+.. +.|+ ++ ++++++.++.+++| +..+
T Consensus 221 ~~--sp-dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g 292 (347)
T 2gop_A 221 AV--DS-DGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDG 292 (347)
T ss_dssp EE--EE-CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESS
T ss_pred eE--CC-CCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCC
Confidence 44 77 45555544432 4788888 44444444455667876 8999 88 89999999999999 8754
Q ss_pred ceehcccccccceEEEEEeeCCCEEEEEeCCCcE-EEeec
Q 021247 276 AAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSI-SLYEY 314 (315)
Q Consensus 276 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i-~i~~~ 314 (315)
+. ..+..+...+.+++|+| ..+++++.+++. +||.+
T Consensus 293 ~~-~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 293 EI-KPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTW 329 (347)
T ss_dssp SE-EEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEE
T ss_pred ce-EEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEe
Confidence 44 33334567899999999 677777777765 78865
No 173
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.84 E-value=1.6e-18 Score=145.56 Aligned_cols=249 Identities=14% Similarity=0.154 Sum_probs=165.1
Q ss_pred ceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccc-c-----ccceEEEEeCCCCCEEEEeeCC--------
Q 021247 16 SVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTG-H-----CLGVVSVAAHPSGIIAASASLD-------- 81 (315)
Q Consensus 16 ~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~-h-----~~~v~~~~~~~~g~~l~s~~~d-------- 81 (315)
.+..++|+|+++ .+++++..++.|.+||..+.+....+.. + ...+..+.++|+|+++++++.+
T Consensus 44 ~~~~~~~s~dg~---~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 120 (349)
T 1jmx_B 44 GPGTAMMAPDNR---TAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY 120 (349)
T ss_dssp SSCEEEECTTSS---EEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred CCceeEECCCCC---EEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEccccccccccc
Confidence 577899998764 2456666789999999988776655432 2 2347889999999999988865
Q ss_pred ----CeEEEEECCCCce---eEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCC-----
Q 021247 82 ----SFVRVFDVDTNAS---IATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGL----- 149 (315)
Q Consensus 82 ----~~i~~w~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~----- 149 (315)
+.|++||+.+++. +..+.. +..+.+++|+|+++ +++. + +.|.+||..+++.+..+........
T Consensus 121 ~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~-~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 195 (349)
T 1jmx_B 121 VVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-LYVA-G--PDIYKMDVKTGKYTVALPLRNWNRKGYSAP 195 (349)
T ss_dssp EECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EEEE-S--SSEEEECTTTCCEEEEECSTTCCCTTBCCC
T ss_pred ccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-EEEc-c--CcEEEEeCCCCceeccccccccCCccccCc
Confidence 8999999987443 333333 34578889999998 5553 3 3499999999887776644321000
Q ss_pred -----CCCccCCC-CcceEEEEECCCCCE-----------EEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCC
Q 021247 150 -----KPTDKSSS-KKFVLSVAWSPDGRR-----------IACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 212 (315)
Q Consensus 150 -----~~~~~~~~-~~~i~~~~~~~~~~~-----------l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 212 (315)
.+.....+ ......+++++++.. +.....++.+.++++. .+...+..+.|+|.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~sp~d 266 (349)
T 1jmx_B 196 DVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFA---------DLTELYFTGLRSPKD 266 (349)
T ss_dssp BCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEE---------ECSSCEEEEEECSSC
T ss_pred cceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccc---------cCCCcceeeEecCCC
Confidence 00000000 012345667655422 1123334444444432 244567889999834
Q ss_pred CcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehccccc
Q 021247 213 PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNH 284 (315)
Q Consensus 213 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 284 (315)
+++++++ ++.|.+||+++++.+..+... ..+.+++|+|+++.|++++.++.|++||+++++.+..+...
T Consensus 267 g~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 267 PNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp TTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred CCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 4556665 889999999998877766533 34678999999998888888999999999988777665443
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.82 E-value=1.7e-18 Score=158.23 Aligned_cols=248 Identities=13% Similarity=0.042 Sum_probs=173.1
Q ss_pred eccccccceEEEEeCCCCCEEEEe--eCCCeEEEEECCCCceeEEeeCCcccEE---------EEEEC--CCCCe-EEEE
Q 021247 55 TNTGHCLGVVSVAAHPSGIIAASA--SLDSFVRVFDVDTNASIATLEASPSEVW---------QMQFD--PKGTT-LAVA 120 (315)
Q Consensus 55 ~~~~h~~~v~~~~~~~~g~~l~s~--~~d~~i~~w~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-~~~~ 120 (315)
.+.+|...+..+++++++.++++. +.++...||....+.....+..+...+. ...|+ |+++. ++++
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 345688899999999988777777 6688999999655555555555544444 44454 99998 7777
Q ss_pred ecCCCeEEEEecC--C-cceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCC----------CcEEEEEc
Q 021247 121 GGGSASVKLWDTA--T-WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMD----------GTISVFDV 187 (315)
Q Consensus 121 ~~~d~~i~~~d~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~d----------g~i~i~d~ 187 (315)
...+..|.++++. . ++.. .+... ....+...+..++|+|||+.|+.++.+ ..|++||+
T Consensus 98 ~~~~~~l~~~~~~~~g~~~~~-~l~~~--------~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~ 168 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAVPR-PLTPV--------SAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPL 168 (662)
T ss_dssp BTTTCCEEEECTTSTTCCCCE-ECSCC--------CCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEET
T ss_pred ECCCCeEEEEcCCCCCCCCCE-eccCC--------ccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEEC
Confidence 6667778888775 2 3322 12110 000133457899999999999988876 58999999
Q ss_pred cc------ceeeeeec-CCccceEEEEEcCCCCcEEEEEeCC--------CeEEEEeCC-CC---eeEEEeecccccEEE
Q 021247 188 TR------AKFLHHLE-GHFMPVRSLVYSPVDPRVLFSASDD--------THVHMYDAE-GK---SLVTAMSGHASWVLS 248 (315)
Q Consensus 188 ~~------~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d--------~~i~~wd~~-~~---~~~~~~~~~~~~i~~ 248 (315)
.+ ++. ..+. .+...+..+.|+| +++.|+.++.+ ..|++||+. ++ +......+|...+..
T Consensus 169 ~~~~~~~~~~~-~~l~~~~~~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~ 246 (662)
T 3azo_A 169 DGSAAADRSAV-RELSDDAHRFVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQ 246 (662)
T ss_dssp TSTTTTCGGGS-EESSCSCSSEECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEE
T ss_pred CCCccccCCce-eEEEecCCCcccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcc
Confidence 87 543 3444 5556777889999 56666655533 479999998 46 444444556788999
Q ss_pred EEEcCCCCeEEEEeCCC--cEEEEecCccceehcccccccc--------eEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 249 VDASPDGAAITTGSSDR--TVKLWDLNMRAAMQSMTNHTDQ--------VWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 249 ~~~~~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~--------v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
+.|+|+|++++++..++ .|.+||+..++.......+... +..++|+|++..+++++. ++++||.+
T Consensus 247 ~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ 321 (662)
T 3azo_A 247 AEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGIL 321 (662)
T ss_dssp EEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEE
T ss_pred eEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEE
Confidence 99999999888888888 5666666555544333333222 567899999999999998 99999943
No 175
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.82 E-value=5.5e-17 Score=135.49 Aligned_cols=260 Identities=12% Similarity=0.086 Sum_probs=183.5
Q ss_pred CCcEEEEcCCCCcceeecc----c--cccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECC
Q 021247 39 DETVKLWRPDDMQLERTNT----G--HCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDP 112 (315)
Q Consensus 39 d~~v~~w~~~~~~~~~~~~----~--h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~ 112 (315)
+++|.++|+++.+....+. + .......+.+. .+.++++...++.|.+||..+++.+.++.. ......+++++
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~ 93 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLS 93 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeC
Confidence 8899999999887655431 1 11235667764 456666677789999999999998887753 45678889988
Q ss_pred CCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEec-CCCcEEEEEcccce
Q 021247 113 KGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS-MDGTISVFDVTRAK 191 (315)
Q Consensus 113 ~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s-~dg~i~i~d~~~~~ 191 (315)
++ .++++...++.|.+||..+++....+...... ........+++ .+++.+++.. .++.|.++|+.+++
T Consensus 94 ~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~--------~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~ 163 (328)
T 3dsm_A 94 DE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMD--------MESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDK 163 (328)
T ss_dssp TT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCC--------TTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTE
T ss_pred CC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCcc--------ccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCe
Confidence 87 56666657899999999998877766543210 00112345666 3444445544 48899999999998
Q ss_pred eeeeecCCccceEEEEEcCCCCcEEEEEeCC----------CeEEEEeCCCCeeEEEeecc-cccEEEEEEcCCCCeEEE
Q 021247 192 FLHHLEGHFMPVRSLVYSPVDPRVLFSASDD----------THVHMYDAEGKSLVTAMSGH-ASWVLSVDASPDGAAITT 260 (315)
Q Consensus 192 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d----------~~i~~wd~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~s 260 (315)
....+.... ....+.++| ++++++++..+ +.|.++|.+++++...+.-. ...+..++++|+++.|.+
T Consensus 164 ~~~~i~~g~-~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 164 VVDELTIGI-QPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYW 241 (328)
T ss_dssp EEEEEECSS-CBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEE
T ss_pred EEEEEEcCC-CccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEE
Confidence 877765433 346778888 56677766554 78999999988877665432 236889999999998877
Q ss_pred EeCCCcEEEEecCccceehc--ccccccceEEEEEeeCCC-EEEEE----eCCCcEEEeec
Q 021247 261 GSSDRTVKLWDLNMRAAMQS--MTNHTDQVWGVSFRPLGG-RVVSV----SDDKSISLYEY 314 (315)
Q Consensus 261 ~~~d~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~s~~~~-~l~s~----~~d~~i~i~~~ 314 (315)
+.. .|.+||..+++.... +........+++++|+++ ..++. ..+++|.+||.
T Consensus 242 ~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 242 INN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp ESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred Ecc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence 655 899999987765322 222245788999999544 44555 57899999985
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.82 E-value=3.1e-18 Score=146.22 Aligned_cols=254 Identities=13% Similarity=0.075 Sum_probs=166.2
Q ss_pred EcCCCCcceeeccccccceEE-----EEeCCCCCEEEEeeC-CC--eEEEEECCCCceeEEeeCCcccEEEEEECCCCCe
Q 021247 45 WRPDDMQLERTNTGHCLGVVS-----VAAHPSGIIAASASL-DS--FVRVFDVDTNASIATLEASPSEVWQMQFDPKGTT 116 (315)
Q Consensus 45 w~~~~~~~~~~~~~h~~~v~~-----~~~~~~g~~l~s~~~-d~--~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 116 (315)
++..+......+..|...... ..|+|+|++|+.++. ++ .|.+||+.+++.......+...+....|+|+++.
T Consensus 15 ~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~ 94 (388)
T 3pe7_A 15 QDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDA 94 (388)
T ss_dssp ECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSE
T ss_pred ecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCE
Confidence 355555555666656554554 789999998888877 66 4888999888776665555555556789999998
Q ss_pred EEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEE--EEECCCCCEEEE-------------------
Q 021247 117 LAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLS--VAWSPDGRRIAC------------------- 175 (315)
Q Consensus 117 ~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~l~~------------------- 175 (315)
++++ ..+..|.+||+.+++....+..+. ..+.. ..++|+++.++.
T Consensus 95 l~~~-~~~~~l~~~d~~~g~~~~~~~~~~-------------~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~ 160 (388)
T 3pe7_A 95 LFYV-KDGRNLMRVDLATLEENVVYQVPA-------------EWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHE 160 (388)
T ss_dssp EEEE-ETTTEEEEEETTTCCEEEEEECCT-------------TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHH
T ss_pred EEEE-eCCCeEEEEECCCCcceeeeechh-------------hcccccceeECCCCCeeccccccCcccccccccchhhh
Confidence 7655 467899999999877655443321 12322 344889988874
Q ss_pred ---ecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeC------CCeEEEEeCCCCeeEEEeeccc--c
Q 021247 176 ---GSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASD------DTHVHMYDAEGKSLVTAMSGHA--S 244 (315)
Q Consensus 176 ---~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~------d~~i~~wd~~~~~~~~~~~~~~--~ 244 (315)
...+..|++||+.+++.. .+..+...+..+.|+|.+++.|+.... ...|.++|..++.... +..+. .
T Consensus 161 ~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~ 238 (388)
T 3pe7_A 161 FYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK-VKTHAEGE 238 (388)
T ss_dssp HGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE-SCCCCTTE
T ss_pred hhccCCcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE-eeeCCCCc
Confidence 224578999999887643 334455678899999933455554443 3378888887665433 33333 3
Q ss_pred cEEEEEEcCCCCeEEEEeC-CC----cEEEEecCccce--ehcccccccc---eEEEEEeeCCCEEEEE---------eC
Q 021247 245 WVLSVDASPDGAAITTGSS-DR----TVKLWDLNMRAA--MQSMTNHTDQ---VWGVSFRPLGGRVVSV---------SD 305 (315)
Q Consensus 245 ~i~~~~~~~~~~~l~s~~~-d~----~i~iwd~~~~~~--~~~~~~~~~~---v~~~~~s~~~~~l~s~---------~~ 305 (315)
.+....|+|+|+.|+..+. ++ .|++||+.+++. +..+.++... .....|+|+|++|+.. ..
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 318 (388)
T 3pe7_A 239 SCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEN 318 (388)
T ss_dssp EEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CC
T ss_pred ccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCC
Confidence 5778899999997755433 22 399999988763 2222221111 1123799999988754 45
Q ss_pred CCcEEEeec
Q 021247 306 DKSISLYEY 314 (315)
Q Consensus 306 d~~i~i~~~ 314 (315)
+..|.+||+
T Consensus 319 ~~~i~~~d~ 327 (388)
T 3pe7_A 319 DPFLYVFNM 327 (388)
T ss_dssp CCEEEEEET
T ss_pred CCEEEEEec
Confidence 668999986
No 177
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.82 E-value=1.2e-18 Score=160.97 Aligned_cols=235 Identities=16% Similarity=0.160 Sum_probs=160.4
Q ss_pred ceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCccc-----EEEEEECCCCCeEEEEecC--------CCeEE
Q 021247 62 GVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSE-----VWQMQFDPKGTTLAVAGGG--------SASVK 128 (315)
Q Consensus 62 ~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~~~~~~~--------d~~i~ 128 (315)
...++.|+|+|.+++++ |++|++||+.++++...+..+... ...++|+|+++.++++... .+.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 35578999999988886 999999999999887777665432 2347899999987665431 15678
Q ss_pred EEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeee-ecCCccce----
Q 021247 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHH-LEGHFMPV---- 203 (315)
Q Consensus 129 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~-~~~~~~~v---- 203 (315)
+||+.+++... + ..+...+...+|||||+.||.+ .++.|++||+.+++.... ..++...+
T Consensus 96 ~~d~~~~~~~~-l-------------~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~ 160 (740)
T 4a5s_A 96 IYDLNKRQLIT-E-------------ERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGI 160 (740)
T ss_dssp EEETTTTEECC-S-------------SCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESB
T ss_pred EEECCCCcEEE-c-------------ccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCc
Confidence 99998876432 1 1122347899999999999888 468999999987764432 12222222
Q ss_pred -------------EEEEEcCCCCcEEEEEeC-CC-----------------------------------eEEEEeCCC--
Q 021247 204 -------------RSLVYSPVDPRVLFSASD-DT-----------------------------------HVHMYDAEG-- 232 (315)
Q Consensus 204 -------------~~~~~~~~~~~~l~s~~~-d~-----------------------------------~i~~wd~~~-- 232 (315)
..+.|+| +++.|+..+. +. .|++||+++
T Consensus 161 ~~~v~~ee~~~~~~~~~wSp-Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~ 239 (740)
T 4a5s_A 161 TDWVYEEEVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLS 239 (740)
T ss_dssp CCHHHHHHTSSSSBCEEECT-TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCC
T ss_pred ccccccchhcCCCcceEECC-CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCC
Confidence 3488999 5666665532 11 588899988
Q ss_pred -Ce--eEEEee------cccccEEEEEEcCCCCeEEEEeC----CCcEEEEecCccc----ee--hcc--cccccceE--
Q 021247 233 -KS--LVTAMS------GHASWVLSVDASPDGAAITTGSS----DRTVKLWDLNMRA----AM--QSM--TNHTDQVW-- 289 (315)
Q Consensus 233 -~~--~~~~~~------~~~~~i~~~~~~~~~~~l~s~~~----d~~i~iwd~~~~~----~~--~~~--~~~~~~v~-- 289 (315)
+. ....+. +|...+..++|+|+|+.++.... +..|++||+.+++ .. .++ ..|...+.
T Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~ 319 (740)
T 4a5s_A 240 SVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRF 319 (740)
T ss_dssp SSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSS
T ss_pred CCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccC
Confidence 62 222333 37788999999999996655432 3479999998876 22 222 34554443
Q ss_pred ---EEEEeeCCCEEE-EEeC-CC--cEEEeec
Q 021247 290 ---GVSFRPLGGRVV-SVSD-DK--SISLYEY 314 (315)
Q Consensus 290 ---~~~~s~~~~~l~-s~~~-d~--~i~i~~~ 314 (315)
..+|+|||+.|+ ..+. +| .|.+|+.
T Consensus 320 ~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~ 351 (740)
T 4a5s_A 320 RPSEPHFTLDGNSFYKIISNEEGYRHICYFQI 351 (740)
T ss_dssp SCCCCEECTTSSEEEEEEECTTSCEEEEEEET
T ss_pred cCCCceEcCCCCEEEEEEEcCCCceEEEEEEC
Confidence 688999999887 6664 44 4555553
No 178
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.81 E-value=3.4e-15 Score=122.49 Aligned_cols=276 Identities=7% Similarity=0.041 Sum_probs=190.7
Q ss_pred ccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceee-ccccccceEEEEeCCCCCEEEEeeCCCeEEEEECC
Q 021247 12 AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERT-NTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD 90 (315)
Q Consensus 12 ~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~-~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~ 90 (315)
.+...+.++++.|.+. +.++...++.|..|+.. .+.... ...+...+..+.++++|.+.++...++.|..|+..
T Consensus 12 ~~~~~~~~i~~d~~g~----l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGK----VWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp SSSCCEEEEEECTTSC----EEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CcCCCccceEECCCCC----EEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 3456899999987654 45554557899999987 444332 23345678999999999988887778899999986
Q ss_pred CCceeEEee--CCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECC
Q 021247 91 TNASIATLE--ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP 168 (315)
Q Consensus 91 ~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 168 (315)
++ ...+. .....+..+.++|++. ++++...++.|.+||. +++.. .+..+. ....+..+++.+
T Consensus 87 -g~-~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~~~-~~~~~~-----------~~~~~~~i~~~~ 150 (299)
T 2z2n_A 87 -GI-IKEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD-DGKIR-EYELPN-----------KGSYPSFITLGS 150 (299)
T ss_dssp -SC-EEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCEE-EEECSS-----------TTCCEEEEEECT
T ss_pred -Cc-EEEEeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECC-CCCEE-EecCCC-----------CCCCCceEEEcC
Confidence 33 23332 2345688999999876 4556666789999998 44332 221111 122478999999
Q ss_pred CCCEEEEecCCCcEEEEEcccceeeee-ecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEE-eecccccE
Q 021247 169 DGRRIACGSMDGTISVFDVTRAKFLHH-LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTA-MSGHASWV 246 (315)
Q Consensus 169 ~~~~l~~~s~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~-~~~~~~~i 246 (315)
+|+..++...++.|..||. +++.... .......+..+.+.+ ++.++++...++.|.+||. ++..... ...+...+
T Consensus 151 ~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~ 227 (299)
T 2z2n_A 151 DNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGN-DDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARP 227 (299)
T ss_dssp TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE
T ss_pred CCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECC-CCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCc
Confidence 9988887777889999998 6654432 333445678899988 4667777767889999999 5544332 23345678
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEEecCccceeh-cccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 247 LSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQ-SMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 247 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
.+++++++|++.++...++.|..||.. +.... ....+...+.++++ ++|...++.. .+.|..++.
T Consensus 228 ~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~ 293 (299)
T 2z2n_A 228 HAITAGAGIDLWFTEWGANKIGRLTSN-NIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTL 293 (299)
T ss_dssp EEEEECSTTCEEEEETTTTEEEEEETT-TEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEE
T ss_pred eeEEECCCCCEEEeccCCceEEEECCC-CceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEc
Confidence 999999999877766678899999984 33221 12344567899999 8887766655 455655553
No 179
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.81 E-value=4.7e-17 Score=131.88 Aligned_cols=237 Identities=11% Similarity=0.022 Sum_probs=167.2
Q ss_pred ceEEEEeCCCCCEEE-EeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeee
Q 021247 62 GVVSVAAHPSGIIAA-SASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIAT 140 (315)
Q Consensus 62 ~v~~~~~~~~g~~l~-s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~ 140 (315)
....+.++++|.+++ +...++.|.+|+..+.............+..++++++++ ++++.. ++.|.+||....... .
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~-~~~i~~~d~~~~~~~-~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT-VYVTDF-NNRVVTLAAGSNNQT-V 101 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCC-EEEEET-TTEEEEECTTCSCCE-E
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCC-EEEEcC-CCEEEEEeCCCceEe-e
Confidence 678899999999887 657789999999765443222122234577899999887 555555 889999998654322 1
Q ss_pred ecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEe
Q 021247 141 LSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSAS 220 (315)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 220 (315)
+.. .....+..++++++|+.+++...++.|.+|+..+.............+..++++| +++++++..
T Consensus 102 ~~~------------~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~ 168 (270)
T 1rwi_B 102 LPF------------DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDN-SGNVYVTDT 168 (270)
T ss_dssp CCC------------CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECT-TCCEEEEEG
T ss_pred eec------------CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeC-CCCEEEEEC
Confidence 111 1112478999999999888877888999998765443322223334567889998 556777777
Q ss_pred CCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEE
Q 021247 221 DDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRV 300 (315)
Q Consensus 221 ~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 300 (315)
.++.|.+||..+.........+...+.+++++++|.++++...++.|.+|+............+...+.+++++|+|+.+
T Consensus 169 ~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~ 248 (270)
T 1rwi_B 169 DNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVY 248 (270)
T ss_dssp GGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEE
T ss_pred CCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEE
Confidence 78899999988766544333444678899999999877877778899999987644332222333578999999999988
Q ss_pred EEEeCCCcEEEeec
Q 021247 301 VSVSDDKSISLYEY 314 (315)
Q Consensus 301 ~s~~~d~~i~i~~~ 314 (315)
++...+++|++|++
T Consensus 249 v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 249 VADRGNDRVVKLTS 262 (270)
T ss_dssp EEEGGGTEEEEECC
T ss_pred EEECCCCEEEEEcC
Confidence 89899999999986
No 180
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.81 E-value=3.9e-17 Score=138.13 Aligned_cols=221 Identities=13% Similarity=0.226 Sum_probs=152.0
Q ss_pred CCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEec---------CCCeEEEEecCCcceeeeecCCCCCCCC
Q 021247 80 LDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGG---------GSASVKLWDTATWNLIATLSIPRPEGLK 150 (315)
Q Consensus 80 ~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------~d~~i~~~d~~~~~~~~~~~~~~~~~~~ 150 (315)
.|+.|.+||..+++.+..+..+..+ .++++|+++.++++.. .+++|.+||..+.+.+..+......
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~--- 103 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKR--- 103 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTB---
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccc---
Confidence 4789999999999888887766555 8999999998877652 3578999999988888777543211
Q ss_pred CCccCCCCcceEEEEECCCCCEEEEecC--CCcEEEEEcccceeeee-ecCCccceEEEEEcCCCCcEEEEEeCCCeEEE
Q 021247 151 PTDKSSSKKFVLSVAWSPDGRRIACGSM--DGTISVFDVTRAKFLHH-LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 227 (315)
Q Consensus 151 ~~~~~~~~~~i~~~~~~~~~~~l~~~s~--dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~ 227 (315)
.........++++|+|++|+++.. ++.|.+||+.+++.+.. +.... ...+.+.|.+...+++.+.|+.+.+
T Consensus 104 ----~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~--~~~v~~~p~~~~~~~~~~~dg~~~~ 177 (361)
T 2oiz_A 104 ----VQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG--CWSVIPQPNRPRSFMTICGDGGLLT 177 (361)
T ss_dssp ----CCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT--EEEEEECTTSSSEEEEEETTSSEEE
T ss_pred ----cccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC--cceeEEcCCCCeeEEEECCCCcEEE
Confidence 001122457899999999988763 68999999999888776 44211 1123344544445555555555555
Q ss_pred EeCCC-CeeE-------------------------------------------------EEee------ccccc----EE
Q 021247 228 YDAEG-KSLV-------------------------------------------------TAMS------GHASW----VL 247 (315)
Q Consensus 228 wd~~~-~~~~-------------------------------------------------~~~~------~~~~~----i~ 247 (315)
|+... ++.. .... .+..+ ..
T Consensus 178 v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~ 257 (361)
T 2oiz_A 178 INLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYN 257 (361)
T ss_dssp EEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSS
T ss_pred EEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCee
Confidence 54422 1111 0000 00000 01
Q ss_pred EEEEcCCCCeEEEEeC-----------CCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 248 SVDASPDGAAITTGSS-----------DRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 248 ~~~~~~~~~~l~s~~~-----------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
.++++|+++.++++.. .++|.+||+.+++.+.++..+. +++++|+|+|++|++++. ++|.+||.
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~ 332 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDI 332 (361)
T ss_dssp CEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEEC
T ss_pred EEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEEC
Confidence 2678898777665542 3479999999999998888776 899999999999998887 99999985
No 181
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.81 E-value=6.1e-17 Score=133.17 Aligned_cols=234 Identities=10% Similarity=0.040 Sum_probs=167.6
Q ss_pred ccccceEEEEeCCCCC-EEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcc
Q 021247 58 GHCLGVVSVAAHPSGI-IAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWN 136 (315)
Q Consensus 58 ~h~~~v~~~~~~~~g~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~ 136 (315)
.+......+.|+|+|+ +++++..++.|+.|+..++ ...+..+...+..++++|+++ ++++...++.|.+||..+++
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~-l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGH-LIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCC-EEEEETTTTEEEEECSTTCC
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCc-EEEEecCCCeEEEEcCCCCc
Confidence 3445567899999998 7888888999999999887 566666677889999999988 45566667899999987766
Q ss_pred eeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEE----ec-------------CCCcEEEEEcccceeeeeecCC
Q 021247 137 LIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIAC----GS-------------MDGTISVFDVTRAKFLHHLEGH 199 (315)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~----~s-------------~dg~i~i~d~~~~~~~~~~~~~ 199 (315)
.......... .....+..++++|+|+++++ |+ ..+.|..++.. ++. ..+..+
T Consensus 102 ~~~~~~~~~~---------~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~ 170 (296)
T 3e5z_A 102 WESIADSFEG---------KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRD 170 (296)
T ss_dssp EEEEECEETT---------EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECC
T ss_pred EEEEeeccCC---------CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecC
Confidence 4432211000 01123567999999998886 43 13467777665 433 334445
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEeCC-CCee---EEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCcc
Q 021247 200 FMPVRSLVYSPVDPRVLFSASDDTHVHMYDAE-GKSL---VTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMR 275 (315)
Q Consensus 200 ~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~-~~~~---~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 275 (315)
......++|+|+ ++.+++.+.++.|.+|+.. .+++ ...+..+...+.+++++++|++.++. ++.|.+|+.+ +
T Consensus 171 ~~~~~gi~~s~d-g~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g 246 (296)
T 3e5z_A 171 RVKPNGLAFLPS-GNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-G 246 (296)
T ss_dssp CSSEEEEEECTT-SCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-S
T ss_pred CCCCccEEECCC-CCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-C
Confidence 566789999994 5555888888999999986 4443 22223345566789999999866655 8889999987 6
Q ss_pred ceehcccccccceEEEEE-eeCCCEEEEEeCCCcEE
Q 021247 276 AAMQSMTNHTDQVWGVSF-RPLGGRVVSVSDDKSIS 310 (315)
Q Consensus 276 ~~~~~~~~~~~~v~~~~~-s~~~~~l~s~~~d~~i~ 310 (315)
+.+..+..+.. +.+++| +|+++.|+.++.++..+
T Consensus 247 ~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~ 281 (296)
T 3e5z_A 247 DELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWS 281 (296)
T ss_dssp CEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEE
T ss_pred CEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEE
Confidence 66766766666 889999 58999898888875444
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.80 E-value=8.1e-16 Score=136.75 Aligned_cols=282 Identities=12% Similarity=0.112 Sum_probs=198.3
Q ss_pred cEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECC--CCceeEEeeCCcccEEEE
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD--TNASIATLEASPSEVWQM 108 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~--~~~~~~~~~~~~~~v~~~ 108 (315)
.++++...++.|.++|.++.+....+... ..+..+.++|+|+++++++.|+.|.+||+. +.+.+..+..... ...+
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~i 245 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARSI 245 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEEE
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-Ccee
Confidence 36777778999999999998887766432 245689999999999999999999999995 7777777766444 5688
Q ss_pred EEC----CCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCC--CC----C------------CC--------------
Q 021247 109 QFD----PKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPE--GL----K------------PT-------------- 152 (315)
Q Consensus 109 ~~~----~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~--~~----~------------~~-------------- 152 (315)
+++ |+|++++++...++++.++|..+.+.+..+...... .. . +.
T Consensus 246 a~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~v 325 (567)
T 1qks_A 246 ETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLV 325 (567)
T ss_dssp EECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEE
T ss_pred EEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEE
Confidence 999 699999988888899999999998888776543210 00 0 00
Q ss_pred c----------cCCCCcceEEEEECCCCCEEEEe-cCCCcEEEEEcccceeeeeecC-Cccc--eEEEE-EcCCCCcEEE
Q 021247 153 D----------KSSSKKFVLSVAWSPDGRRIACG-SMDGTISVFDVTRAKFLHHLEG-HFMP--VRSLV-YSPVDPRVLF 217 (315)
Q Consensus 153 ~----------~~~~~~~i~~~~~~~~~~~l~~~-s~dg~i~i~d~~~~~~~~~~~~-~~~~--v~~~~-~~~~~~~~l~ 217 (315)
. ......+...+.|+|++++|+++ ..++.|.++|+.+++....+.. ...+ -+... ++|..+.+++
T Consensus 326 d~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~ 405 (567)
T 1qks_A 326 DYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWA 405 (567)
T ss_dssp ETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEE
T ss_pred ecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEE
Confidence 0 00011234467899999988654 4678899999999987765543 2111 11222 4675566666
Q ss_pred EEe-CCCeEEEEeCCC-------CeeEEEeecccccEEEEEEcCCCCeEEEEeC-------CCcEEEEecCcc-----ce
Q 021247 218 SAS-DDTHVHMYDAEG-------KSLVTAMSGHASWVLSVDASPDGAAITTGSS-------DRTVKLWDLNMR-----AA 277 (315)
Q Consensus 218 s~~-~d~~i~~wd~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~-------d~~i~iwd~~~~-----~~ 277 (315)
++. .++.|.++|... .+.+..+......-..+..+|+++++.+... ..+|.++|+++. ..
T Consensus 406 t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~ 485 (567)
T 1qks_A 406 TSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDP 485 (567)
T ss_dssp EEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCC
T ss_pred eCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCC
Confidence 654 568999999886 5667776654433345778999998887663 358999999876 11
Q ss_pred -ehccc--------ccccceEEEEEeeCCCEEEEE-e----CCCcEEEeec
Q 021247 278 -MQSMT--------NHTDQVWGVSFRPLGGRVVSV-S----DDKSISLYEY 314 (315)
Q Consensus 278 -~~~~~--------~~~~~v~~~~~s~~~~~l~s~-~----~d~~i~i~~~ 314 (315)
++.+. .-...+..+.|+|+|.++... . .++.|.|+|.
T Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~ 536 (567)
T 1qks_A 486 EFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDD 536 (567)
T ss_dssp CEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEET
T ss_pred CcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEEC
Confidence 12221 123578899999999987543 2 3789999874
No 183
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.80 E-value=1.5e-16 Score=128.83 Aligned_cols=242 Identities=10% Similarity=0.004 Sum_probs=169.2
Q ss_pred ceEEEEEeecCCCCCcEEE-EeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCce
Q 021247 16 SVWAVTWVPATETRPALLL-TGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNAS 94 (315)
Q Consensus 16 ~v~~v~~~~~~~~~~~~l~-sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~ 94 (315)
...++++.|.++ +.+ +.+.++.|..|+..+.........+...+..+.++++|.++++.. ++.|.+||......
T Consensus 25 ~p~~i~~~~~g~----l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 25 SPSGVAVDSAGN----VYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ 99 (270)
T ss_dssp CEEEEEECTTCC----EEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC
T ss_pred CccceEECCCCC----EEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE
Confidence 678888887653 455 447789999998765543322223334678899999999777666 88999999876543
Q ss_pred eEEee-CCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEE
Q 021247 95 IATLE-ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI 173 (315)
Q Consensus 95 ~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 173 (315)
..+. .....+..++++|+++ ++++...++.|.+|+..+....... ......+..++++++|+.+
T Consensus 100 -~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~~~~-------------~~~~~~p~~i~~~~~g~l~ 164 (270)
T 1rwi_B 100 -TVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQTVLP-------------FTGLNDPDGVAVDNSGNVY 164 (270)
T ss_dssp -EECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSCEECC-------------CCSCCSCCCEEECTTCCEE
T ss_pred -eeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCceeEeec-------------cccCCCceeEEEeCCCCEE
Confidence 2332 2235688999999887 5566667789999976543322110 0011235689999999977
Q ss_pred EEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcC
Q 021247 174 ACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASP 253 (315)
Q Consensus 174 ~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~ 253 (315)
++...++.|.+||............+...+..+++.+ ++.++++...++.|.+||..+.........+...+.+++++|
T Consensus 165 v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~ 243 (270)
T 1rwi_B 165 VTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDE-AGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDS 243 (270)
T ss_dssp EEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECT-TCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECT
T ss_pred EEECCCCEEEEEecCCCceEeecccCCCCceEEEECC-CCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECC
Confidence 7777788999999876655443333445678999998 457777777888999999877654433333445689999999
Q ss_pred CCCeEEEEeCCCcEEEEecCcccee
Q 021247 254 DGAAITTGSSDRTVKLWDLNMRAAM 278 (315)
Q Consensus 254 ~~~~l~s~~~d~~i~iwd~~~~~~~ 278 (315)
+|+++++...+++|+++++...+.+
T Consensus 244 ~g~l~v~~~~~~~v~~~~~~~~~~~ 268 (270)
T 1rwi_B 244 DRTVYVADRGNDRVVKLTSLEHHHH 268 (270)
T ss_dssp TCCEEEEEGGGTEEEEECCCGGGSC
T ss_pred CCCEEEEECCCCEEEEEcCCCcccc
Confidence 9998899999999999998865543
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.79 E-value=1.8e-16 Score=145.88 Aligned_cols=246 Identities=12% Similarity=0.035 Sum_probs=166.9
Q ss_pred ccccceEEEEeCCCCCEEEEeeCCC-----eEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCC-------
Q 021247 58 GHCLGVVSVAAHPSGIIAASASLDS-----FVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA------- 125 (315)
Q Consensus 58 ~h~~~v~~~~~~~~g~~l~s~~~d~-----~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~------- 125 (315)
+|...+..+.|+|+|++|+.+..++ .|++||+.+++....... ...+..++|+|+++.++++.....
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc-CcccceEEEEeCCCEEEEEEECCcccccccc
Confidence 3545688999999999988665443 899999999887653221 122567899999998877654322
Q ss_pred --------eEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecC-----CCcEEEEEccc---
Q 021247 126 --------SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSM-----DGTISVFDVTR--- 189 (315)
Q Consensus 126 --------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~-----dg~i~i~d~~~--- 189 (315)
.|++|++.+.+....+.... ..+..++..+.|+|+|++|+..+. +..|++||+.+
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~---------~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 271 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEF---------PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESN 271 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECC---------TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSS
T ss_pred ccccCCCCEEEEEECCCCcccceEEecc---------CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccc
Confidence 39999987754221111110 112334678999999999887654 56899999976
Q ss_pred ---ce-eeeeecCCccceEEEEEcCCCCcEEEEEeCC---CeEEEEeCCCCe--eEEEeecccc--cEEEEEEcCCCCeE
Q 021247 190 ---AK-FLHHLEGHFMPVRSLVYSPVDPRVLFSASDD---THVHMYDAEGKS--LVTAMSGHAS--WVLSVDASPDGAAI 258 (315)
Q Consensus 190 ---~~-~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---~~i~~wd~~~~~--~~~~~~~~~~--~i~~~~~~~~~~~l 258 (315)
+. ....+..+...+.. .|+|++..+++.+..+ ..|.+||..++. ....+..|.. .+..+.+++++.++
T Consensus 272 ~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv 350 (710)
T 2xdw_A 272 GITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLV 350 (710)
T ss_dssp SSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEE
T ss_pred ccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEE
Confidence 43 34555555555544 4777555555555443 479999988653 2344444543 67789999888888
Q ss_pred EEEeCCCc--EEEEecCccceehcccccccceEEEEEeeCCCEEE-EEe---CCCcEEEeec
Q 021247 259 TTGSSDRT--VKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV-SVS---DDKSISLYEY 314 (315)
Q Consensus 259 ~s~~~d~~--i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~---~d~~i~i~~~ 314 (315)
++...|+. |.+|++..++.++.+..+.+.+..++++|++..++ +.+ ..++|.+||+
T Consensus 351 ~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 351 LCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred EEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence 99988985 55567756766666777777888999999988765 323 2468888875
No 185
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.78 E-value=8e-16 Score=125.01 Aligned_cols=218 Identities=12% Similarity=0.093 Sum_probs=166.1
Q ss_pred cEEEEeeCCCcEEEEcCCCCcceeeccccc-cceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCc-ccEEEE
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHC-LGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASP-SEVWQM 108 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~-~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~-~~v~~~ 108 (315)
.+|++++.|+.|++||.++++....+..+. ..+.++.+.|+|++++ +.++.|+.||. +++.+..+.... ..+..+
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~ 82 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTA 82 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEE
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccccc
Confidence 479999999999999998999888877665 4688999999999998 34778999999 788888887643 478889
Q ss_pred EECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcc
Q 021247 109 QFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 188 (315)
Q Consensus 109 ~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~ 188 (315)
.+.|+++.+++.++.++.+..+|. .++.+..+...... .........++..++|+++++.+.++.|..||..
T Consensus 83 ~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~-------~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 83 RILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGI-------ERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp EECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSC-------SSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred EECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCC-------CcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 999999876554433777888875 67777776543210 0011123455778999999999999999999998
Q ss_pred cceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecc------cccEEEEEEcCCCCeEEEEe
Q 021247 189 RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGH------ASWVLSVDASPDGAAITTGS 262 (315)
Q Consensus 189 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~s~~ 262 (315)
++.+-.+.... .+.++...+ ++++++++..++.|..+|.++++.+-.+..+ ...+..+...++|.++++..
T Consensus 155 -G~~~w~~~~~~-~~~~~~~~~-~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 155 -GQLLNSVKLSG-TPFSSAFLD-NGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp -SCEEEEEECSS-CCCEEEECT-TSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred -CCEEEEEECCC-CccceeEcC-CCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 88877776543 345566666 6778888888889999999988887766533 23478888899999888764
No 186
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.78 E-value=1.7e-17 Score=141.75 Aligned_cols=262 Identities=11% Similarity=0.019 Sum_probs=160.7
Q ss_pred cCCCCcceeeccccc-----cceEEEEeCCCCCEEEEeeCC---CeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeE
Q 021247 46 RPDDMQLERTNTGHC-----LGVVSVAAHPSGIIAASASLD---SFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117 (315)
Q Consensus 46 ~~~~~~~~~~~~~h~-----~~v~~~~~~~~g~~l~s~~~d---~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 117 (315)
|..+.+....+..+. ..+..++|+|+|++++.+..+ ..|++||+.+++..............+.|+|+++.+
T Consensus 16 d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l 95 (396)
T 3c5m_A 16 DSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAF 95 (396)
T ss_dssp CTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEE
T ss_pred cCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEE
Confidence 455554444443332 236678899999988766443 478899998876544333222222236799999987
Q ss_pred EEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCcc---CCCCcc-----eEEEEECCCCCEEEEe-----cCCCcEEE
Q 021247 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDK---SSSKKF-----VLSVAWSPDGRRIACG-----SMDGTISV 184 (315)
Q Consensus 118 ~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----i~~~~~~~~~~~l~~~-----s~dg~i~i 184 (315)
+++ ..++.|.+||+.+++.......+.. ..+... ...... ...+.|+|+++.++.. ..+..|++
T Consensus 96 ~~~-~~~~~l~~~d~~~~~~~~~~~~~~~--~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~ 172 (396)
T 3c5m_A 96 FYV-KNELNLMKVDLETLEEQVIYTVDEE--WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIK 172 (396)
T ss_dssp EEE-ETTTEEEEEETTTCCEEEEEECCTT--EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEE
T ss_pred EEE-EcCCcEEEEECCCCCcEEEEecccc--cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEE
Confidence 655 4566899999988765544432211 000000 000000 0003568888877654 45678999
Q ss_pred EEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCC------CeEEEEeCCCCeeEEEeecc-cccEEEEEEcCCCCe
Q 021247 185 FDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD------THVHMYDAEGKSLVTAMSGH-ASWVLSVDASPDGAA 257 (315)
Q Consensus 185 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d------~~i~~wd~~~~~~~~~~~~~-~~~i~~~~~~~~~~~ 257 (315)
||+.+++..... .+...+..+.|+|.++..|+..+.+ ..|.+||..++......... ...+..+.|+|+|+.
T Consensus 173 ~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~ 251 (396)
T 3c5m_A 173 VDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSA 251 (396)
T ss_dssp EETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSC
T ss_pred EECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCE
Confidence 999887654433 4556788999999444544444332 46899998766543332221 235788999999998
Q ss_pred EEEEeCC-----CcEEEEecCccceehcccccccceEEEEEee-CCCEEEEEe----------------CCCcEEEeec
Q 021247 258 ITTGSSD-----RTVKLWDLNMRAAMQSMTNHTDQVWGVSFRP-LGGRVVSVS----------------DDKSISLYEY 314 (315)
Q Consensus 258 l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~----------------~d~~i~i~~~ 314 (315)
|+.++.+ +.|++||+.+++........ ... +.|+| +|++++..+ .+..|.+||.
T Consensus 252 l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~ 327 (396)
T 3c5m_A 252 MAYVSYFKGQTDRVIYKANPETLENEEVMVMP--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNT 327 (396)
T ss_dssp EEEEEEETTTCCEEEEEECTTTCCEEEEEECC--SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEET
T ss_pred EEEEecCCCCccceEEEEECCCCCeEEeeeCC--CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEec
Confidence 7766544 44999999876543322111 222 89999 999888755 3467888875
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.77 E-value=2e-15 Score=124.09 Aligned_cols=238 Identities=12% Similarity=0.059 Sum_probs=164.7
Q ss_pred ccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCC
Q 021247 12 AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDT 91 (315)
Q Consensus 12 ~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~ 91 (315)
.+.....+++|.|.++ .+++++..++.|..|+.++. ...+..+...+..+.++++|.++++...++.|.+||..+
T Consensus 25 ~~~~~~eg~~~d~~g~---~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~ 99 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARS---AVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPG 99 (296)
T ss_dssp CCCSSEEEEEEEGGGT---EEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTT
T ss_pred cCCccccCCeEeCCCC---EEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCC
Confidence 4456778999999764 36888889999999998876 444555667789999999999988877788999999977
Q ss_pred CceeEEeeCC----cccEEEEEECCCCCeEEEE----ec-------------CCCeEEEEecCCcceeeeecCCCCCCCC
Q 021247 92 NASIATLEAS----PSEVWQMQFDPKGTTLAVA----GG-------------GSASVKLWDTATWNLIATLSIPRPEGLK 150 (315)
Q Consensus 92 ~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~----~~-------------~d~~i~~~d~~~~~~~~~~~~~~~~~~~ 150 (315)
++........ ...+..++++|+|+.+ ++ |. ..+.|..+|.. ++.. .+.
T Consensus 100 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~-vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~~-------- 168 (296)
T 3e5z_A 100 GEWESIADSFEGKKLNSPNDVCLAPDGSLW-FSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS-API-------- 168 (296)
T ss_dssp CCEEEEECEETTEECCCCCCEEECTTSCEE-EEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE-EEE--------
T ss_pred CcEEEEeeccCCCCCCCCCCEEECCCCCEE-EECCccccccccccccccccCCCcEEEEECCC-CCEE-Eee--------
Confidence 7654332211 1235678999998744 44 22 12456556554 2222 111
Q ss_pred CCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcc-ccee---eeeecCCccceEEEEEcCCCCcEEEEEeCCCeEE
Q 021247 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT-RAKF---LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVH 226 (315)
Q Consensus 151 ~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~-~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~ 226 (315)
........++|+|+++.+++.+.++.|++||+. .++. ...+..+...+..+++.+ +++++++. ++.|.
T Consensus 169 -----~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~--~~~v~ 240 (296)
T 3e5z_A 169 -----RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDA-GGLIWASA--GDGVH 240 (296)
T ss_dssp -----CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBT-TSCEEEEE--TTEEE
T ss_pred -----cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECC-CCCEEEEc--CCeEE
Confidence 112236789999999988888888999999986 4443 222233445567889998 55666655 78899
Q ss_pred EEeCCCCeeEEEeecccccEEEEEE-cCCCCeEEEEeCCCcEEEEecCccc
Q 021247 227 MYDAEGKSLVTAMSGHASWVLSVDA-SPDGAAITTGSSDRTVKLWDLNMRA 276 (315)
Q Consensus 227 ~wd~~~~~~~~~~~~~~~~i~~~~~-~~~~~~l~s~~~d~~i~iwd~~~~~ 276 (315)
+||.+ ++.+..+..+.. +.+++| .|+++.|++++.++ +.-++.++++
T Consensus 241 ~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 241 VLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp EECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCB
T ss_pred EECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEccccc
Confidence 99987 556666666666 889999 58888888888763 4444554433
No 188
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.76 E-value=8e-16 Score=125.01 Aligned_cols=214 Identities=12% Similarity=0.061 Sum_probs=163.5
Q ss_pred CCCEEEEeeCCCeEEEEECCCCceeEEeeCCc-ccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCC
Q 021247 71 SGIIAASASLDSFVRVFDVDTNASIATLEASP-SEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGL 149 (315)
Q Consensus 71 ~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~ 149 (315)
.+++|++++.|+.|++||.++++.+..+..+. ..+..+.+.|+|+.++ + .++.|..||. +++.+..+..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s--~~~~V~~~d~-~G~~~W~~~~~~---- 75 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-S--YSKGAKMITR-DGRELWNIAAPA---- 75 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-E--CBSEEEEECT-TSCEEEEEECCT----
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-e--CCCCEEEECC-CCCEEEEEcCCC----
Confidence 46889999999999999999999998887665 4678889999998554 3 4778999999 788888876421
Q ss_pred CCCccCCCCcceEEEEECCCCCEEEEecC-CCcEEEEEcccceeeeeec------CCccceEEEEEcCCCCcEEEEEeCC
Q 021247 150 KPTDKSSSKKFVLSVAWSPDGRRIACGSM-DGTISVFDVTRAKFLHHLE------GHFMPVRSLVYSPVDPRVLFSASDD 222 (315)
Q Consensus 150 ~~~~~~~~~~~i~~~~~~~~~~~l~~~s~-dg~i~i~d~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~s~~~d 222 (315)
...+.++.+.++|+.+++.+. ++.+..+|. .++.+..+. .+......+.+.+ ++.++++...+
T Consensus 76 --------~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~ 145 (276)
T 3no2_A 76 --------GCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFAT 145 (276)
T ss_dssp --------TCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETTT
T ss_pred --------CccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECC-CCCEEEEecCC
Confidence 123678899999999998877 788888886 566554432 2222344556666 67789999999
Q ss_pred CeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccc------cceEEEEEeeC
Q 021247 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHT------DQVWGVSFRPL 296 (315)
Q Consensus 223 ~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~------~~v~~~~~s~~ 296 (315)
+.|..||.+ ++.+-.+... ..+.++...+++.+++++..+++|..+|..+++.+-++..+. ..+.++...++
T Consensus 146 ~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~ 223 (276)
T 3no2_A 146 SEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQN 223 (276)
T ss_dssp TEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTT
T ss_pred CEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCC
Confidence 999999998 7776666543 345667888999999999989999999999888765554321 23778888899
Q ss_pred CCEEEEEe
Q 021247 297 GGRVVSVS 304 (315)
Q Consensus 297 ~~~l~s~~ 304 (315)
|+.+++..
T Consensus 224 G~i~v~~~ 231 (276)
T 3no2_A 224 GGLYICNW 231 (276)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEec
Confidence 98777763
No 189
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.76 E-value=7.3e-14 Score=114.55 Aligned_cols=275 Identities=8% Similarity=0.051 Sum_probs=188.3
Q ss_pred ccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCccee-eccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCC
Q 021247 14 EESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLER-TNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92 (315)
Q Consensus 14 ~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~-~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~ 92 (315)
...+.++++.+.+. +.++...++.|..|+.. .+... ....+...+..+.+.++|.+.++...++.|..+|.. +
T Consensus 19 ~~~p~~i~~d~~g~----l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 19 DSGPYGITSSEDGK----VWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp TCCEEEEEECTTSC----EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCcceeeECCCCC----EEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence 45778888877654 55555578999999987 44433 223334578899999999988887778899999987 4
Q ss_pred ceeEEee--CCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCC
Q 021247 93 ASIATLE--ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDG 170 (315)
Q Consensus 93 ~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 170 (315)
+. ..+. .....+..+++++++. ++++...++.|..+|.. ++.. .+..+. ....+..+++.+++
T Consensus 93 ~~-~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~-~~~~~~-----------~~~~~~~i~~d~~g 157 (300)
T 2qc5_A 93 GF-TEYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GTIY-EYDLPN-----------KGSYPAFITLGSDN 157 (300)
T ss_dssp CE-EEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCEE-EEECSS-----------TTCCEEEEEECTTS
T ss_pred Ce-EEecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CCEE-EccCCC-----------CCCCceeEEECCCC
Confidence 43 2232 2335688999999887 44566667889999986 4433 222211 11247899999999
Q ss_pred CEEEEecCCCcEEEEEcccceeeee-ecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEE
Q 021247 171 RRIACGSMDGTISVFDVTRAKFLHH-LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSV 249 (315)
Q Consensus 171 ~~l~~~s~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~ 249 (315)
+..++...++.|..+|. +++.... ...+...+..+.+.+ ++.++++....+.|.+||............+...+.++
T Consensus 158 ~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i 235 (300)
T 2qc5_A 158 ALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGN-DGALWFVEIMGNKIGRITTTGEISEYDIPTPNARPHAI 235 (300)
T ss_dssp SEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEE
T ss_pred CEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECC-CCCEEEEccCCCEEEEEcCCCcEEEEECCCCCCCceEE
Confidence 97777777889999998 4544332 223445678999988 56777777777889999984332222233345668899
Q ss_pred EEcCCCCeEEEEeCCCcEEEEecCccceeh-cccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 250 DASPDGAAITTGSSDRTVKLWDLNMRAAMQ-SMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 250 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
+++++|++.++...++.|..|+.. +.... .+......+.++++.++|+..++.. . .|..++.
T Consensus 236 ~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 236 TAGKNSEIWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp EECSTTCEEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred EECCCCCEEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 999999877776667899999984 33221 1232345678999999998666655 4 7776664
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.75 E-value=1.1e-15 Score=127.68 Aligned_cols=253 Identities=8% Similarity=-0.029 Sum_probs=177.0
Q ss_pred cceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCce
Q 021247 15 ESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNAS 94 (315)
Q Consensus 15 ~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~ 94 (315)
+...++.+.. ..+.++...++.|.+||..+.+....+. ....+..+.+++++.++++...++.|.+||..+++.
T Consensus 44 ~~~~~i~~~~-----~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~ 117 (328)
T 3dsm_A 44 DVAQSMVIRD-----GIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEI 117 (328)
T ss_dssp SCEEEEEEET-----TEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEE
T ss_pred ccceEEEEEC-----CEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeE
Confidence 3456676632 1255666678999999999988877664 235678899988887666665899999999999887
Q ss_pred eEEeeCCc-----ccEEEEEECCCCCeEEEEec-CCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECC
Q 021247 95 IATLEASP-----SEVWQMQFDPKGTTLAVAGG-GSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP 168 (315)
Q Consensus 95 ~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 168 (315)
...+.... .....+++ ++..++++.. .+++|.++|..+++.+..+..... ...++++|
T Consensus 118 ~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~--------------p~~i~~~~ 181 (328)
T 3dsm_A 118 TGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQ--------------PTSLVMDK 181 (328)
T ss_dssp EEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSC--------------BCCCEECT
T ss_pred EEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCC--------------ccceEEcC
Confidence 76665433 03345566 3555666654 488999999999888776643211 34678899
Q ss_pred CCCEEEEecCC----------CcEEEEEcccceeeeeecCC-ccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEE
Q 021247 169 DGRRIACGSMD----------GTISVFDVTRAKFLHHLEGH-FMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT 237 (315)
Q Consensus 169 ~~~~l~~~s~d----------g~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~ 237 (315)
+|++++++..+ +.|.++|..+++....+... ......++|+|++. .|+.+.. .|.+||..++++..
T Consensus 182 dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~-~lyv~~~--~v~~~d~~t~~~~~ 258 (328)
T 3dsm_A 182 YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRD-TLYWINN--DIWRMPVEADRVPV 258 (328)
T ss_dssp TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSC-EEEEESS--SEEEEETTCSSCCS
T ss_pred CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCC-EEEEEcc--EEEEEECCCCceee
Confidence 99877776554 78999999988877665432 23578999999554 4544433 89999998776532
Q ss_pred E--eecccccEEEEEEcC-CCCeEEEE----eCCCcEEEEecCccceehcccccccceEEEEEe
Q 021247 238 A--MSGHASWVLSVDASP-DGAAITTG----SSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFR 294 (315)
Q Consensus 238 ~--~~~~~~~i~~~~~~~-~~~~l~s~----~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 294 (315)
. +..+...+..++++| ++.+.++. ..++.|.+||.+ ++.+.++.. ......++|-
T Consensus 259 ~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~-G~~P~~~~~~ 320 (328)
T 3dsm_A 259 RPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV-GIIPGAFCWK 320 (328)
T ss_dssp SCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE-EESEEEEEEE
T ss_pred eeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe-ccCcceEEEe
Confidence 1 121245688999999 56666666 578899999998 777776643 3344556553
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.75 E-value=1.5e-15 Score=139.81 Aligned_cols=247 Identities=11% Similarity=0.010 Sum_probs=169.4
Q ss_pred hhccccceEEEEEeecCCCCCcEEEEeeC-CC----cEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCe-
Q 021247 10 ENAHEESVWAVTWVPATETRPALLLTGSL-DE----TVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSF- 83 (315)
Q Consensus 10 ~~~h~~~v~~v~~~~~~~~~~~~l~sgs~-d~----~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~- 83 (315)
..+|+..+..++|+|+++ .|+.++. +| .|++||.++++.......+ ..+..+.|+|||+.|+.++.++.
T Consensus 120 ~~~~~~~~~~~~~SPDg~----~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~ 194 (710)
T 2xdw_A 120 SDDGTVALRGYAFSEDGE----YFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQD 194 (710)
T ss_dssp CTTSCEEEEEEEECTTSS----EEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCS
T ss_pred ccCCCEEEEEEEECCCCC----EEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcc
Confidence 345666799999999876 4555443 33 8999999888765532222 23667999999999998887766
Q ss_pred ---------------EEEEECCCCce--eEEeeC--CcccEEEEEECCCCCeEEEEecC----CCeEEEEecCC------
Q 021247 84 ---------------VRVFDVDTNAS--IATLEA--SPSEVWQMQFDPKGTTLAVAGGG----SASVKLWDTAT------ 134 (315)
Q Consensus 84 ---------------i~~w~~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~----d~~i~~~d~~~------ 134 (315)
|++|++.+++. ...+.. +...+..+.|+|+++.++++... +..|.+||+.+
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 274 (710)
T 2xdw_A 195 GKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGIT 274 (710)
T ss_dssp SCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSC
T ss_pred ccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccC
Confidence 99999988763 223232 34457889999999988776542 57899999875
Q ss_pred cc-eeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCC----CcEEEEEcccce--eeeeecCCcc--ceEE
Q 021247 135 WN-LIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMD----GTISVFDVTRAK--FLHHLEGHFM--PVRS 205 (315)
Q Consensus 135 ~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~d----g~i~i~d~~~~~--~~~~~~~~~~--~v~~ 205 (315)
++ ....+..+ ...+. -.|+|+|+.|+..+.. ..|.+||+.++. ....+..|.. .+..
T Consensus 275 ~~~~~~~l~~~-------------~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~ 340 (710)
T 2xdw_A 275 GILKWVKLIDN-------------FEGEY-DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEW 340 (710)
T ss_dssp SSCCCEEEECS-------------SSSCE-EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEE
T ss_pred CccceEEeeCC-------------CCcEE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEE
Confidence 32 12222211 11122 2478888887765543 369999997764 2344444433 6778
Q ss_pred EEEcCCCCcEEEEEeCCCe--EEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEE-EEe---CCCcEEEEecCccc
Q 021247 206 LVYSPVDPRVLFSASDDTH--VHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAIT-TGS---SDRTVKLWDLNMRA 276 (315)
Q Consensus 206 ~~~~~~~~~~l~s~~~d~~--i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-s~~---~d~~i~iwd~~~~~ 276 (315)
+.|++ ++.++++...++. |.+||..+++.+..+..+.+.+..+.++|++..++ +.+ ..++|..||+.+++
T Consensus 341 ~~~~~-~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 341 VACVR-SNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEET-TTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEc-CCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 88885 6778888888874 66778766666677777777888999999887554 322 34789999998765
No 192
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.75 E-value=7.9e-15 Score=121.35 Aligned_cols=240 Identities=11% Similarity=0.117 Sum_probs=165.1
Q ss_pred cceEEEEeCCCCCEEEE-------eeCCCeEEEEECCCCceeEEee----CCcccEEEEEECCC-CCeEEEEecCCCeEE
Q 021247 61 LGVVSVAAHPSGIIAAS-------ASLDSFVRVFDVDTNASIATLE----ASPSEVWQMQFDPK-GTTLAVAGGGSASVK 128 (315)
Q Consensus 61 ~~v~~~~~~~~g~~l~s-------~~~d~~i~~w~~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~~~~~~~~d~~i~ 128 (315)
.....+.++++|.++++ ...++.|.+||..+++...... .+...+..+.++++ ++ ++++.. ...|.
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~-~~~l~ 95 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVADM-RLGLL 95 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEEET-TTEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEEEC-CCCEE
Confidence 35678899999998888 6778999999987776533221 13356889999998 55 445443 34788
Q ss_pred EEecCCcceeee-ecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCC---------------CcEEEEEccccee
Q 021247 129 LWDTATWNLIAT-LSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMD---------------GTISVFDVTRAKF 192 (315)
Q Consensus 129 ~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~d---------------g~i~i~d~~~~~~ 192 (315)
+||.. ++.... .... . ......+..++++++|+..++...+ +.|..+|.. ++.
T Consensus 96 ~~d~~-g~~~~~~~~~~--~-------~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~ 164 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDS--E-------GRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM 164 (314)
T ss_dssp EEETT-SCEEECCSBCT--T-------SCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE
T ss_pred EEeCC-CCEEEEEeccC--C-------CccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE
Confidence 99987 554322 1110 0 0112347789999999887776655 578888865 443
Q ss_pred eeeecCCccceEEEEEc----CCCCcEEEEEeCCCeEEEEeCC-CCee-----EEEeeccc-ccEEEEEEcCCCCeEEEE
Q 021247 193 LHHLEGHFMPVRSLVYS----PVDPRVLFSASDDTHVHMYDAE-GKSL-----VTAMSGHA-SWVLSVDASPDGAAITTG 261 (315)
Q Consensus 193 ~~~~~~~~~~v~~~~~~----~~~~~~l~s~~~d~~i~~wd~~-~~~~-----~~~~~~~~-~~i~~~~~~~~~~~l~s~ 261 (315)
.. +..+......++++ |++..++++...++.|.+||.+ .+.. ...+..+. ..+..++++++|+++++.
T Consensus 165 ~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~ 243 (314)
T 1pjx_A 165 IQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVAN 243 (314)
T ss_dssp EE-EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEE
T ss_pred EE-eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEE
Confidence 32 22233456788898 8443455666678999999975 3332 22233333 567889999999988888
Q ss_pred eCCCcEEEEecCccceehcccccccceEEEEEeeCCCEE-EEEeCCCcEEEeec
Q 021247 262 SSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRV-VSVSDDKSISLYEY 314 (315)
Q Consensus 262 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~d~~i~i~~~ 314 (315)
..++.|.+||.++++.+..+..+...+.+++|+|+|+.| ++...++.|..|+.
T Consensus 244 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 244 WGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp ETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred cCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 788999999998777666666666789999999999955 45556688988875
No 193
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.74 E-value=2.8e-14 Score=119.11 Aligned_cols=231 Identities=11% Similarity=0.107 Sum_probs=157.1
Q ss_pred ccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCC----CeEEEE
Q 021247 12 AHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLD----SFVRVF 87 (315)
Q Consensus 12 ~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d----~~i~~w 87 (315)
.+...+.+++|.|.+. +++++..++.|.+|+.++.+.......+...+.++.++++|.++++...+ +.|.+|
T Consensus 42 ~~~~~~~~~~~~~~g~----l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~ 117 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQ----LFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAA 117 (333)
T ss_dssp SSCCCEEEEEECTTSC----EEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEE
T ss_pred ccCccccCcEECCCCC----EEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEE
Confidence 3445678999987653 67788889999999998776655443455679999999999988877766 689999
Q ss_pred ECCCCceeEEee--CCcccEEEEEECCCCCeEEEEecC------CCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCc
Q 021247 88 DVDTNASIATLE--ASPSEVWQMQFDPKGTTLAVAGGG------SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKK 159 (315)
Q Consensus 88 ~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (315)
|..++.....+. .....+..+.++|+++.+ ++... .+.|..+|..+++...... ...
T Consensus 118 d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~-v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--------------~~~ 182 (333)
T 2dg1_A 118 TENGDNLQDIIEDLSTAYCIDDMVFDSKGGFY-FTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ--------------NIS 182 (333)
T ss_dssp CTTSCSCEEEECSSSSCCCEEEEEECTTSCEE-EEECCCBTTBCCEEEEEECTTSCCEEEEEE--------------EES
T ss_pred eCCCCEEEEEEccCccCCcccceEECCCCCEE-EEeccccccCCCceEEEEeCCCCEEEEeec--------------CCC
Confidence 998776543332 233568899999998754 44332 3456666655433322110 011
Q ss_pred ceEEEEECCCCCEE-EEecCCCcEEEEEccc-ceeee--------eecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEe
Q 021247 160 FVLSVAWSPDGRRI-ACGSMDGTISVFDVTR-AKFLH--------HLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 229 (315)
Q Consensus 160 ~i~~~~~~~~~~~l-~~~s~dg~i~i~d~~~-~~~~~--------~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd 229 (315)
.+..++|+|+++.| ++.+.++.|.+||+.+ +.... .+.++ ..+..+.+++ +++++++...++.|.+||
T Consensus 183 ~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~-~G~l~v~~~~~~~v~~~d 260 (333)
T 2dg1_A 183 VANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDS-DDNLYVAMYGQGRVLVFN 260 (333)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBT-TCCEEEEEETTTEEEEEC
T ss_pred cccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECC-CCCEEEEEcCCCEEEEEC
Confidence 26789999999865 4556678999999853 22221 11222 3567899998 567777777889999999
Q ss_pred CCCCeeEEEeecccc------cEEEEEEcCCCCeEEEEeCC
Q 021247 230 AEGKSLVTAMSGHAS------WVLSVDASPDGAAITTGSSD 264 (315)
Q Consensus 230 ~~~~~~~~~~~~~~~------~i~~~~~~~~~~~l~s~~~d 264 (315)
.+ ++.+..+..+.. .+.+++|+|+++.|+.++.+
T Consensus 261 ~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 261 KR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp TT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 85 444555543332 68899999998766655554
No 194
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.74 E-value=1.3e-15 Score=128.02 Aligned_cols=216 Identities=14% Similarity=0.191 Sum_probs=147.7
Q ss_pred ceEEEEeCCCCCEEEEee---------CCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCC--C--eEE
Q 021247 62 GVVSVAAHPSGIIAASAS---------LDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGS--A--SVK 128 (315)
Q Consensus 62 ~v~~~~~~~~g~~l~s~~---------~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d--~--~i~ 128 (315)
.+....+ +|..++... .++.|++||+.+++... + ..+..++|+|+|+.+++..... + .|.
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~ 88 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIW 88 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence 3455556 777766432 26679999998876533 3 4577899999999887765432 3 478
Q ss_pred EEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCC---------------------------Cc
Q 021247 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMD---------------------------GT 181 (315)
Q Consensus 129 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~d---------------------------g~ 181 (315)
+||+.+++....... .. +..++|+|+|+.|+.++.+ ..
T Consensus 89 ~~~~~~g~~~~l~~~--------------~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 153 (347)
T 2gop_A 89 VADLETLSSKKILEA--------------KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTT 153 (347)
T ss_dssp EEETTTTEEEEEEEE--------------SE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEE
T ss_pred EEECCCCceEEEEcC--------------CC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccce
Confidence 888877654433211 12 7789999999988877632 57
Q ss_pred EEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCC---------CeEEEEeCCCCeeEEEeecccccEEEEEEc
Q 021247 182 ISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD---------THVHMYDAEGKSLVTAMSGHASWVLSVDAS 252 (315)
Q Consensus 182 i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---------~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~ 252 (315)
|++||+.+++.+..+.. . .+..+.|+|+ + +++++..+ ..|.++| +++. ..+..+ ..+..+ +
T Consensus 154 l~~~d~~~~~~~~~l~~-~-~~~~~~~spd-g-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~~-~~~~~~--s 223 (347)
T 2gop_A 154 FWIFDTESEEVIEEFEK-P-RFSSGIWHRD-K-IVVNVPHREIIPQYFKFWDIYIWE--DGKE-EKMFEK-VSFYAV--D 223 (347)
T ss_dssp EEEEETTTTEEEEEEEE-E-TTCEEEEETT-E-EEEEEECCCSSCCSSCCEEEEEEE--TTEE-EEEEEE-ESEEEE--E
T ss_pred EEEEECCCCeEEeeecC-C-CcccccCCCC-e-EEEEEecccccccccccccEEEeC--CCce-EEeccC-cceeeE--C
Confidence 99999988876444444 3 6788999984 4 77776543 2456666 4443 333334 555554 9
Q ss_pred CCCCeEEEEeCC--------CcEEEEecCccceehcccccccceEE-EEEeeCCCEEEEEeCCCcEEEeec
Q 021247 253 PDGAAITTGSSD--------RTVKLWDLNMRAAMQSMTNHTDQVWG-VSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 253 ~~~~~l~s~~~d--------~~i~iwd~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
|+|+.|+.++.+ ..|.+|| .++.......+...+.. +.|+ ++ .+++++.++.++|| +
T Consensus 224 pdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~ 289 (347)
T 2gop_A 224 SDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-I 289 (347)
T ss_dssp ECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-E
T ss_pred CCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-E
Confidence 999988877754 3677888 44444444556677886 8999 88 88899999999999 6
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.73 E-value=7.2e-16 Score=141.54 Aligned_cols=241 Identities=12% Similarity=0.031 Sum_probs=159.5
Q ss_pred ccccceEEEEeCCCCCEEE-----EeeCCCeEEEEECCCCcee-EE-eeCCcccEEEEEECCCCCeEEEEecCCCe----
Q 021247 58 GHCLGVVSVAAHPSGIIAA-----SASLDSFVRVFDVDTNASI-AT-LEASPSEVWQMQFDPKGTTLAVAGGGSAS---- 126 (315)
Q Consensus 58 ~h~~~v~~~~~~~~g~~l~-----s~~~d~~i~~w~~~~~~~~-~~-~~~~~~~v~~~~~~~~~~~~~~~~~~d~~---- 126 (315)
+|...+..+.|+|+|++|+ .|+.+..|++||+.+++.+ .. +.. .....++|+|+++.++++. .+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--~~~~~~~wspDg~~l~~~~-~d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEG--GKYATPKWTPDSKGFYYEW-LPTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSC--CTTCCCEECTTSSEEEEEE-CCCCTTSC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCc--ccccceEEecCCCEEEEEE-ecCCCCCc
Confidence 4666789999999999988 4555678999999998764 11 111 1125789999999877654 3333
Q ss_pred ---------EEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCC----cEEEEEcccceee
Q 021247 127 ---------VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG----TISVFDVTRAKFL 193 (315)
Q Consensus 127 ---------i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg----~i~i~d~~~~~~~ 193 (315)
|++|++.+.+....+.... ..+...+..+.|+|+|++|+..+.++ .|+++|..++..
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~---------~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~- 264 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHER---------TGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF- 264 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECC---------CCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-
T ss_pred cccCCCCCEEEEEECCCCchhceEEEec---------CCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-
Confidence 9999998755211111110 11223578999999999998776555 677887655443
Q ss_pred eeecCCccceEEEEEcCCCCcEEEEEe---CCCeEEEEeCCCCee--EEEeec-c-cccEEEEEEcCCCCeEEEEeCCCc
Q 021247 194 HHLEGHFMPVRSLVYSPVDPRVLFSAS---DDTHVHMYDAEGKSL--VTAMSG-H-ASWVLSVDASPDGAAITTGSSDRT 266 (315)
Q Consensus 194 ~~~~~~~~~v~~~~~~~~~~~~l~s~~---~d~~i~~wd~~~~~~--~~~~~~-~-~~~i~~~~~~~~~~~l~s~~~d~~ 266 (315)
..+..+...+....+ +++. +++... .++.|.+||+.++.. ...+.. + ...+..++++ ++.++++...|+.
T Consensus 265 ~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~ 341 (695)
T 2bkl_A 265 RLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDAT 341 (695)
T ss_dssp EEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTE
T ss_pred EEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCE
Confidence 334444445555556 4344 555554 258899999876542 223333 3 4457788888 6778899999999
Q ss_pred EEEEecC-ccceehccccc-ccceEEEEEeeCCCEEEE----EeCCCcEEEeec
Q 021247 267 VKLWDLN-MRAAMQSMTNH-TDQVWGVSFRPLGGRVVS----VSDDKSISLYEY 314 (315)
Q Consensus 267 i~iwd~~-~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s----~~~d~~i~i~~~ 314 (315)
.++|.++ .++....+..+ ...+..++++|++..++. ....++|.+||+
T Consensus 342 ~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~ 395 (695)
T 2bkl_A 342 SEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSV 395 (695)
T ss_dssp EEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEET
T ss_pred EEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 8888665 34444555544 556778899999987762 233478888885
No 196
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.72 E-value=3e-14 Score=122.32 Aligned_cols=240 Identities=14% Similarity=0.107 Sum_probs=166.5
Q ss_pred ceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCC-eEEEEecCCcceeee
Q 021247 62 GVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA-SVKLWDTATWNLIAT 140 (315)
Q Consensus 62 ~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~-~i~~~d~~~~~~~~~ 140 (315)
....++++++|.++++...++.|++||..++........... .. ++|+|+++.++++....+ .|.++|.........
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEE
Confidence 577899999999888888889999999988766555444332 33 899999987765544333 888888765443322
Q ss_pred ecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeee----ecCCccce-E-EEEEcCCCCc
Q 021247 141 LSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHH----LEGHFMPV-R-SLVYSPVDPR 214 (315)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~----~~~~~~~v-~-~~~~~~~~~~ 214 (315)
+..... .....+.+++++|++..|+.+..++.|+.||+.++..... ..++...- . .++|+|.++.
T Consensus 210 ~g~~~~---------~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ 280 (409)
T 3hrp_A 210 IGQLGS---------TFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSN 280 (409)
T ss_dssp EEECCT---------TSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTE
T ss_pred eeeccc---------hhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCE
Confidence 200000 0112356889999555555566788999999976653222 22222222 3 8999997788
Q ss_pred EEEEEeCCCeEEEEeCCCCeeEEEeecc---------------cccEEEEEEcCCCCeEEEEe-CCCcEEEEecCcccee
Q 021247 215 VLFSASDDTHVHMYDAEGKSLVTAMSGH---------------ASWVLSVDASPDGAAITTGS-SDRTVKLWDLNMRAAM 278 (315)
Q Consensus 215 ~l~s~~~d~~i~~wd~~~~~~~~~~~~~---------------~~~i~~~~~~~~~~~l~s~~-~d~~i~iwd~~~~~~~ 278 (315)
++++-..++.|+.|+.... +..+.++ -.....++++|+|+++++-. .+++|+.|++..+..
T Consensus 281 lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v- 357 (409)
T 3hrp_A 281 FYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV- 357 (409)
T ss_dssp EEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-
T ss_pred EEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-
Confidence 8888888999999998764 2222222 24578999999999878877 889999999766653
Q ss_pred hccccc---------------ccceEEEEEeeCCCEEEEEeCCCcEEEeecC
Q 021247 279 QSMTNH---------------TDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 279 ~~~~~~---------------~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
.++.++ -....+++++|+|..+++-...++|+.++++
T Consensus 358 ~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 358 STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 333332 2468899999998888888888999988763
No 197
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.72 E-value=1.5e-13 Score=116.38 Aligned_cols=251 Identities=16% Similarity=0.077 Sum_probs=172.6
Q ss_pred cEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEee----------CCCeEEEEECCCCceeEEeeCC-------cc
Q 021247 41 TVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASAS----------LDSFVRVFDVDTNASIATLEAS-------PS 103 (315)
Q Consensus 41 ~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~----------~d~~i~~w~~~~~~~~~~~~~~-------~~ 103 (315)
+|.++|..+.++...++.-..+ .+.++|+|+.++.+. .++.|.+||..+.+.+..+... ..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCC
Confidence 8899999988877666543333 899999999888765 3678999999988877766543 12
Q ss_pred cEEEEEECCCCCeEEEEecC-CCeEEEEecCCcceeee-ecCCCCCCCCCCccCCCCcceEEEEECCCC-CEEEEecCCC
Q 021247 104 EVWQMQFDPKGTTLAVAGGG-SASVKLWDTATWNLIAT-LSIPRPEGLKPTDKSSSKKFVLSVAWSPDG-RRIACGSMDG 180 (315)
Q Consensus 104 ~v~~~~~~~~~~~~~~~~~~-d~~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~s~dg 180 (315)
....+.++|+++.++++... +++|.++| .+++.+.. +..+. ++.+.|++ +.+++.+.||
T Consensus 126 ~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~-----------------~~~~~~~~~~~~~~~~~dg 187 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT-----------------CYHIHPGAPSTFYLLCAQG 187 (373)
T ss_pred CccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc-----------------eEEEEeCCCceEEEEcCCC
Confidence 34578999999998877644 68899999 98888766 53321 23344554 4556677899
Q ss_pred cEEEEEcccceeeeeec-----CCccce-EEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe--eEEEeec----------c
Q 021247 181 TISVFDVTRAKFLHHLE-----GHFMPV-RSLVYSPVDPRVLFSASDDTHVHMYDAEGKS--LVTAMSG----------H 242 (315)
Q Consensus 181 ~i~i~d~~~~~~~~~~~-----~~~~~v-~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~--~~~~~~~----------~ 242 (315)
.+.++|. +++...... ....++ ....+.+.++.+++.. ..+.+.+.|..... .+..+.- .
T Consensus 188 ~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~ 265 (373)
T 2mad_H 188 GLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGATNKAPIDALSGGRKADTWR 265 (373)
T ss_pred CEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcceEeeeeeecCCccccccee
Confidence 9999999 776553221 111121 2234555455545444 67789999986542 2222210 1
Q ss_pred cccEEEEEEcCCCCeEEEEeC----------CCcEEEEecCccceehcccccccceEEEEEeeCCC-EEEEEe-CCCcEE
Q 021247 243 ASWVLSVDASPDGAAITTGSS----------DRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGG-RVVSVS-DDKSIS 310 (315)
Q Consensus 243 ~~~i~~~~~~~~~~~l~s~~~----------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~-~d~~i~ 310 (315)
......+.++|+++.+.++.. ++.|.++|+.+++.+.++.. ....++++|+|||+ +++++. .+++|.
T Consensus 266 p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ 344 (373)
T 2mad_H 266 PGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLH 344 (373)
T ss_pred cCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEE
Confidence 122344778999887766543 35799999999988887753 34688999999999 677776 589999
Q ss_pred Eeec
Q 021247 311 LYEY 314 (315)
Q Consensus 311 i~~~ 314 (315)
++|.
T Consensus 345 ViD~ 348 (373)
T 2mad_H 345 IYDA 348 (373)
T ss_pred EEEC
Confidence 9986
No 198
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.72 E-value=4.7e-16 Score=142.78 Aligned_cols=244 Identities=10% Similarity=-0.040 Sum_probs=159.3
Q ss_pred hhccccceEEEEEeecCCCCCcEEE-----EeeCCCcEEEEcCCCCcceeeccccccce--EEEEeCCCCCEEEEeeCCC
Q 021247 10 ENAHEESVWAVTWVPATETRPALLL-----TGSLDETVKLWRPDDMQLERTNTGHCLGV--VSVAAHPSGIIAASASLDS 82 (315)
Q Consensus 10 ~~~h~~~v~~v~~~~~~~~~~~~l~-----sgs~d~~v~~w~~~~~~~~~~~~~h~~~v--~~~~~~~~g~~l~s~~~d~ 82 (315)
+.+|+..+.+++|+|+++ .|+ .|+.+..|++||.++++.... .+...+ ..+.|+|+|+.|+.++.|.
T Consensus 116 a~~~~~~~~~~~~SPDG~----~la~~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~~~~~~~~~wspDg~~l~~~~~d~ 189 (695)
T 2bkl_A 116 SKDGTVSLGTWAVSWDGK----KVAFAQKPNAADEAVLHVIDVDSGEWSKV--DVIEGGKYATPKWTPDSKGFYYEWLPT 189 (695)
T ss_dssp SSSSCEEEEEEEECTTSS----EEEEEEEETTCSCCEEEEEETTTCCBCSS--CCBSCCTTCCCEECTTSSEEEEEECCC
T ss_pred ccCCCEEEEEEEECCCCC----EEEEEECCCCCceEEEEEEECCCCCCcCC--cccCcccccceEEecCCCEEEEEEecC
Confidence 346777899999999886 355 344456899999988776411 111122 6789999999999998887
Q ss_pred e-------------EEEEECCCCce--eEEee--CCcccEEEEEECCCCCeEEEEecCC-C--eEEEEecCCcceeeeec
Q 021247 83 F-------------VRVFDVDTNAS--IATLE--ASPSEVWQMQFDPKGTTLAVAGGGS-A--SVKLWDTATWNLIATLS 142 (315)
Q Consensus 83 ~-------------i~~w~~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~d-~--~i~~~d~~~~~~~~~~~ 142 (315)
. |++|++.+++. ...+. .+...+..+.|+|+|+.++++.... + .|.++|..+++... +.
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~-l~ 268 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRL-LV 268 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEE-EE
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEE-ee
Confidence 6 99999988762 23332 3345788999999999887765443 2 66666654433222 21
Q ss_pred CCCCCCCCCCccCCCCcceEEEEECCCCCEEEEec---CCCcEEEEEccccee--eeeecC-C-ccceEEEEEcCCCCcE
Q 021247 143 IPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS---MDGTISVFDVTRAKF--LHHLEG-H-FMPVRSLVYSPVDPRV 215 (315)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s---~dg~i~i~d~~~~~~--~~~~~~-~-~~~v~~~~~~~~~~~~ 215 (315)
.+ ...+....+ ++|..++.+. .++.|.+||+.++.. ...+.. + ...+..+.|+ ++.+
T Consensus 269 ~~-------------~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~l 332 (695)
T 2bkl_A 269 KG-------------VGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--GGHL 332 (695)
T ss_dssp EC-------------SSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--TTEE
T ss_pred cC-------------CCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--CCEE
Confidence 11 111334445 5666334433 257899999976642 233332 2 4457778887 5678
Q ss_pred EEEEeCCCeEEEEeCC-CCeeEEEeecc-cccEEEEEEcCCCCeEE----EEeCCCcEEEEecCccc
Q 021247 216 LFSASDDTHVHMYDAE-GKSLVTAMSGH-ASWVLSVDASPDGAAIT----TGSSDRTVKLWDLNMRA 276 (315)
Q Consensus 216 l~s~~~d~~i~~wd~~-~~~~~~~~~~~-~~~i~~~~~~~~~~~l~----s~~~d~~i~iwd~~~~~ 276 (315)
+++...|+..++|... .+.....+..+ .+.+..+.++|++..++ +....++|++||+.+++
T Consensus 333 v~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 333 SLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp EEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 8899999887777543 23344445444 56677888999887665 23335789999998765
No 199
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.72 E-value=3.1e-15 Score=125.51 Aligned_cols=256 Identities=15% Similarity=0.110 Sum_probs=173.5
Q ss_pred CCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEee----------CCCeEEEEECCCCceeEEeeCCc------
Q 021247 39 DETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASAS----------LDSFVRVFDVDTNASIATLEASP------ 102 (315)
Q Consensus 39 d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~----------~d~~i~~w~~~~~~~~~~~~~~~------ 102 (315)
++.|.+.|..+.+....++.-..+ . +.++|+|++++.+. .++.|.+||..+.+.+.++....
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~ 135 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLV 135 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcccccc
Confidence 789999999999888776543344 4 99999999776654 36789999999999888775422
Q ss_pred -ccEEEEEECCCCCeEEEEec-CCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCC
Q 021247 103 -SEVWQMQFDPKGTTLAVAGG-GSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG 180 (315)
Q Consensus 103 -~~v~~~~~~~~~~~~~~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg 180 (315)
.....+.++|+|+.++++.. .++.|.++|+.+.+.+.++..+.. ...+....+.+++.+.||
T Consensus 136 g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~----------------~~~~P~g~~~~~~~~~DG 199 (386)
T 3sjl_D 136 GTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC----------------YHIFPTAPDTFFMHCRDG 199 (386)
T ss_dssp SCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----------------EEEEEEETTEEEEEETTS
T ss_pred CCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc----------------ceeecCCCceeEEECCCC
Confidence 23456899999998887764 378999999999999888855321 112222345666667788
Q ss_pred cEEEEEccc-ceeeeeecCC----ccceE-EEEEcCCCCcEEEEEeCCCeEEEEeCCCCe--eEEEee---------c-c
Q 021247 181 TISVFDVTR-AKFLHHLEGH----FMPVR-SLVYSPVDPRVLFSASDDTHVHMYDAEGKS--LVTAMS---------G-H 242 (315)
Q Consensus 181 ~i~i~d~~~-~~~~~~~~~~----~~~v~-~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~--~~~~~~---------~-~ 242 (315)
.+.+.++.+ ++.......+ ..++. ...|.+.++++++ .+.++.+++.|..+.. ....+. + .
T Consensus 200 ~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~ 278 (386)
T 3sjl_D 200 SLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWR 278 (386)
T ss_dssp CEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEE
T ss_pred CEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceecccccccccccc
Confidence 888888765 4432211111 11221 1345433565555 5557999999987653 222221 0 1
Q ss_pred cccEEEEEEcCCCCeEEEEeC----------CCcEEEEecCccceehcccccccceEEEEEeeCCC-EEEEE-eCCCcEE
Q 021247 243 ASWVLSVDASPDGAAITTGSS----------DRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGG-RVVSV-SDDKSIS 310 (315)
Q Consensus 243 ~~~i~~~~~~~~~~~l~s~~~----------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~-~~d~~i~ 310 (315)
......++++|+++.+...-. .++|.+.|+.+++.++++.- ...+++++++||++ +|++. ..+++|.
T Consensus 279 p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~Vs 357 (386)
T 3sjl_D 279 PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLY 357 (386)
T ss_dssp ECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEE
T ss_pred CCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEE
Confidence 122334677888887766532 25799999999998887754 24788999999997 66664 4589999
Q ss_pred Eeec
Q 021247 311 LYEY 314 (315)
Q Consensus 311 i~~~ 314 (315)
++|.
T Consensus 358 ViD~ 361 (386)
T 3sjl_D 358 IHDA 361 (386)
T ss_dssp EEET
T ss_pred EEEC
Confidence 9985
No 200
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.71 E-value=3.1e-13 Score=110.75 Aligned_cols=237 Identities=8% Similarity=0.050 Sum_probs=169.1
Q ss_pred ccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEee--CCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCc
Q 021247 58 GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLE--ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATW 135 (315)
Q Consensus 58 ~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~ 135 (315)
.+...+.++.++++|.+.++...++.|.+||.. +.. ..+. .....+..+++++++. +.++...++.|..||.. +
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-TEYPLPTPDAKVMCLTISSDGE-VWFTENAANKIGRITKK-G 87 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-EEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT-S
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-EEecCCcccCceeeEEECCCCC-EEEeCCCCCeEEEECCC-C
Confidence 344578999999999988877778899999988 443 3332 2346788999999887 44555667889999975 2
Q ss_pred ceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeee-ecCCccceEEEEEcCCCCc
Q 021247 136 NLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHH-LEGHFMPVRSLVYSPVDPR 214 (315)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~ 214 (315)
+ ...+..+. ....+..+++.++|+.+++...++.|..||. +++.... .......+..+.+.+ ++.
T Consensus 88 ~-~~~~~~~~-----------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~-~g~ 153 (299)
T 2z2n_A 88 I-IKEYTLPN-----------PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGS-DNA 153 (299)
T ss_dssp C-EEEEECSS-----------TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECT-TSC
T ss_pred c-EEEEeCCC-----------cCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcC-CCC
Confidence 2 22332211 1224788999999988888777889999998 4443322 223445678999987 557
Q ss_pred EEEEEeCCCeEEEEeCCCCeeEEE-eecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehc-ccccccceEEEE
Q 021247 215 VLFSASDDTHVHMYDAEGKSLVTA-MSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS-MTNHTDQVWGVS 292 (315)
Q Consensus 215 ~l~s~~~d~~i~~wd~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~~~ 292 (315)
++++...++.|..||. +++.... ...+...+.++++++++.+.++...++.|.+|+. .++.... ...+...+.+++
T Consensus 154 l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~ 231 (299)
T 2z2n_A 154 LWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAIT 231 (299)
T ss_dssp EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEE
T ss_pred EEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEE
Confidence 7777777889999998 5544332 3334556889999999997777767889999998 5543221 233446788999
Q ss_pred EeeCCCEEEEEeCCCcEEEeec
Q 021247 293 FRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 293 ~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
++++|+..++...++.|.+|+.
T Consensus 232 ~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 232 AGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp ECSTTCEEEEETTTTEEEEEET
T ss_pred ECCCCCEEEeccCCceEEEECC
Confidence 9999987777667788988874
No 201
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.68 E-value=2.1e-13 Score=121.36 Aligned_cols=228 Identities=13% Similarity=0.094 Sum_probs=164.7
Q ss_pred CCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecC--CcceeeeecCCCCC
Q 021247 70 PSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTA--TWNLIATLSIPRPE 147 (315)
Q Consensus 70 ~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~--~~~~~~~~~~~~~~ 147 (315)
+.+.++++...+++|.++|..+++.+.++.... .+..+.++|++++++++ +.++.|.+||+. +.+.+..+....
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-~p~~v~~SpDGr~lyv~-~~dg~V~viD~~~~t~~~v~~i~~G~-- 240 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVI-GRDGKVNMIDLWMKEPTTVAEIKIGS-- 240 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEE-ETTSEEEEEETTSSSCCEEEEEECCS--
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-CccceEECCCCCEEEEE-cCCCeEEEEECCCCCCcEeEEEecCC--
Confidence 455677888889999999999999888887543 45689999999987654 578999999995 666666553211
Q ss_pred CCCCCccCCCCcceEEEEEC----CCCCEEEEec-CCCcEEEEEcccceeeeeecCC-----------ccceEEEEEcCC
Q 021247 148 GLKPTDKSSSKKFVLSVAWS----PDGRRIACGS-MDGTISVFDVTRAKFLHHLEGH-----------FMPVRSLVYSPV 211 (315)
Q Consensus 148 ~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~s-~dg~i~i~d~~~~~~~~~~~~~-----------~~~v~~~~~~~~ 211 (315)
....++|+ |+|++++++. .++.+.++|..+.+.+..+... ...+..+..++.
T Consensus 241 ------------~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~ 308 (567)
T 1qks_A 241 ------------EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHY 308 (567)
T ss_dssp ------------EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSS
T ss_pred ------------CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCC
Confidence 25689999 6999887655 5689999999998887765422 124677888887
Q ss_pred CCcEEEEEeCCCeEEEEeCCCCeeEEE-eecccccEEEEEEcCCCCeEEEEe-CCCcEEEEecCccceehcccc-----c
Q 021247 212 DPRVLFSASDDTHVHMYDAEGKSLVTA-MSGHASWVLSVDASPDGAAITTGS-SDRTVKLWDLNMRAAMQSMTN-----H 284 (315)
Q Consensus 212 ~~~~l~s~~~d~~i~~wd~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~s~~-~d~~i~iwd~~~~~~~~~~~~-----~ 284 (315)
++.++++....|.|.++|......+.. .........++.|+|++++++++. .+++|.++|+.+++....+.. |
T Consensus 309 ~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Ph 388 (567)
T 1qks_A 309 RPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPH 388 (567)
T ss_dssp SSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBC
T ss_pred CCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCC
Confidence 777788888889999999876532221 122334567889999999876655 578899999999876655432 3
Q ss_pred ccceEEEEEeeCCCEEEEEe--CCCcEEEeec
Q 021247 285 TDQVWGVSFRPLGGRVVSVS--DDKSISLYEY 314 (315)
Q Consensus 285 ~~~v~~~~~s~~~~~l~s~~--~d~~i~i~~~ 314 (315)
-+.--. -++|++..+...+ .+++|.+++.
T Consensus 389 pg~g~~-~~~p~~g~v~~t~~~g~~~Vsvid~ 419 (567)
T 1qks_A 389 PGRGAN-FVHPTFGPVWATSHMGDDSVALIGT 419 (567)
T ss_dssp CTTCEE-EEETTTEEEEEEEBSSSSEEEEEEC
T ss_pred Ccccee-eECCCCCcEEEeCCCCCCeEEEecC
Confidence 211111 2688766664433 4689999985
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.68 E-value=2.9e-14 Score=131.86 Aligned_cols=243 Identities=16% Similarity=0.096 Sum_probs=154.7
Q ss_pred cccceEEEEeCCCCCEEEEeeCC-----CeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCC--------
Q 021247 59 HCLGVVSVAAHPSGIIAASASLD-----SFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA-------- 125 (315)
Q Consensus 59 h~~~v~~~~~~~~g~~l~s~~~d-----~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~-------- 125 (315)
|...+..+.|+|||++|+.+..+ ..|++||+.+++.+.... ....+..++|+|+ +.++++.....
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 44568889999999988866543 469999999987654311 1112246789999 88877654322
Q ss_pred -----eEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCC-----CcEEEEEcccc--eee
Q 021247 126 -----SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMD-----GTISVFDVTRA--KFL 193 (315)
Q Consensus 126 -----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~d-----g~i~i~d~~~~--~~~ 193 (315)
.|++|++.+......+.... ..+..++..+.|+|||++|+..+.+ ..|++||+.++ +..
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~---------~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 309 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFAT---------PELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPV 309 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECC---------TTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCC
T ss_pred CCCCCEEEEEECCCCchhCEEEecc---------CCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCccc
Confidence 48889887654211111111 1122347789999999988876644 38999999876 313
Q ss_pred eeecCCccceEEEEEcCCCCcEEEEEeC---CCeEEEEeCCCC--eeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEE
Q 021247 194 HHLEGHFMPVRSLVYSPVDPRVLFSASD---DTHVHMYDAEGK--SLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVK 268 (315)
Q Consensus 194 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~---d~~i~~wd~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~ 268 (315)
..+..+...+.... +|++..+++.... ++.|.+||..+. .....+..+...+..+.++ ++.++++...|+..+
T Consensus 310 ~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~ 387 (741)
T 1yr2_A 310 TALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQ 387 (741)
T ss_dssp EEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEE
T ss_pred EEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEE
Confidence 44544444444443 3644444444332 456999998874 3333344444556677777 567888999999888
Q ss_pred EEecC-ccceehcccc-cccceEEEEEeeCCCEEE-E---EeCCCcEEEeec
Q 021247 269 LWDLN-MRAAMQSMTN-HTDQVWGVSFRPLGGRVV-S---VSDDKSISLYEY 314 (315)
Q Consensus 269 iwd~~-~~~~~~~~~~-~~~~v~~~~~s~~~~~l~-s---~~~d~~i~i~~~ 314 (315)
+|.++ .++..+.+.. +...+..++++|++..|+ + ....++|.+||+
T Consensus 388 l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 388 VLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDP 439 (741)
T ss_dssp EEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred EEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 87654 3444444544 356788999999988765 2 223478888875
No 203
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.67 E-value=2.8e-13 Score=111.99 Aligned_cols=236 Identities=10% Similarity=0.091 Sum_probs=159.7
Q ss_pred ceEEEEEeecCCCCCcEEEE-------eeCCCcEEEEcCCCCcceeecc----ccccceEEEEeCCC-CCEEEEeeCCCe
Q 021247 16 SVWAVTWVPATETRPALLLT-------GSLDETVKLWRPDDMQLERTNT----GHCLGVVSVAAHPS-GIIAASASLDSF 83 (315)
Q Consensus 16 ~v~~v~~~~~~~~~~~~l~s-------gs~d~~v~~w~~~~~~~~~~~~----~h~~~v~~~~~~~~-g~~l~s~~~d~~ 83 (315)
...+++|.+.+. ++++ +..++.|..|+..+.+...... ++...+..+.++++ |.++++.. ...
T Consensus 19 ~~~~~~~~~~g~----l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~ 93 (314)
T 1pjx_A 19 GAEGPVFDKNGD----FYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLG 93 (314)
T ss_dssp TCEEEEECTTSC----EEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTE
T ss_pred CccCceECCCCC----EEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCC
Confidence 567889986543 5666 5778999999987766543222 25567899999999 77666554 447
Q ss_pred EEEEECCCCceeEE-eeC----CcccEEEEEECCCCCeEEEEecCC---------------CeEEEEecCCcceeeeecC
Q 021247 84 VRVFDVDTNASIAT-LEA----SPSEVWQMQFDPKGTTLAVAGGGS---------------ASVKLWDTATWNLIATLSI 143 (315)
Q Consensus 84 i~~w~~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~~~~~~~d---------------~~i~~~d~~~~~~~~~~~~ 143 (315)
|.+||.. ++.... ... ....+..++++|+++.+ ++...+ +.|..+|.. ++......
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~-v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~- 169 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLW-ITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT- 169 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEE-EEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE-
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEE-EEecCcccccccccccccCCCCeEEEECCC-CCEEEecc-
Confidence 9999988 554322 211 12347889999998754 444333 467777654 33222110
Q ss_pred CCCCCCCCCccCCCCcceEEEEEC----CCCCEE-EEecCCCcEEEEEcc-cce-----eeeeecCCc-cceEEEEEcCC
Q 021247 144 PRPEGLKPTDKSSSKKFVLSVAWS----PDGRRI-ACGSMDGTISVFDVT-RAK-----FLHHLEGHF-MPVRSLVYSPV 211 (315)
Q Consensus 144 ~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l-~~~s~dg~i~i~d~~-~~~-----~~~~~~~~~-~~v~~~~~~~~ 211 (315)
.......++++ |+++.+ ++...++.|.+||+. .++ ....+..+. ..+..+++++
T Consensus 170 -------------~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~- 235 (314)
T 1pjx_A 170 -------------AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE- 235 (314)
T ss_dssp -------------EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT-
T ss_pred -------------CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECC-
Confidence 01125688999 998765 455678899999986 343 222333333 5578899998
Q ss_pred CCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCe-EEEEeCCCcEEEEecCc
Q 021247 212 DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAA-ITTGSSDRTVKLWDLNM 274 (315)
Q Consensus 212 ~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~s~~~d~~i~iwd~~~ 274 (315)
+++++++...++.|.+||.++++.+..+..+...+.+++++|+++. +++...++.|..|++..
T Consensus 236 ~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 236 DNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 5678888778899999999866666666666678999999999984 45555678899999875
No 204
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.67 E-value=4.4e-13 Score=110.15 Aligned_cols=227 Identities=10% Similarity=-0.004 Sum_probs=154.8
Q ss_pred eEEEEeCCC-CCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeee
Q 021247 63 VVSVAAHPS-GIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL 141 (315)
Q Consensus 63 v~~~~~~~~-g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~ 141 (315)
.-...|+++ +.++++...++.|+.||..++.. ..+. ....+..++++|+++ ++++. +..|.+||..+++.....
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~-l~v~~--~~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGG-YVATI--GTKFCALNWKEQSAVVLA 89 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSS-EEEEE--TTEEEEEETTTTEEEEEE
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCC-EEEEE--CCeEEEEECCCCcEEEEE
Confidence 346677774 56777777789999999987754 3333 346788999999998 44433 568999998876543322
Q ss_pred cCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecC-----------CCcEEEEEcccceeeeeecCCccceEEEEEcC
Q 021247 142 SIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSM-----------DGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 210 (315)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~-----------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~ 210 (315)
..... .....+..++++|+|+++++... .+.|+.+|.. ++.. .+..+....+.++|+|
T Consensus 90 ~~~~~---------~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~-~~~~~~~~pngi~~sp 158 (297)
T 3g4e_A 90 TVDND---------KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVK-KYFDQVDISNGLDWSL 158 (297)
T ss_dssp ECCTT---------CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEE-EEEEEESBEEEEEECT
T ss_pred ecCCC---------CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEE-EEeeccccccceEEcC
Confidence 21110 11234788999999996665422 2345555543 2222 2222334568899999
Q ss_pred CCCcEEEEEeCCCeEEEEeC--CCCee-----EEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccc
Q 021247 211 VDPRVLFSASDDTHVHMYDA--EGKSL-----VTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN 283 (315)
Q Consensus 211 ~~~~~l~s~~~d~~i~~wd~--~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 283 (315)
++..++++.+.++.|.+|+. .++.+ ...+..+...+..++++++|++.++...++.|..||..+++.+..+..
T Consensus 159 dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~ 238 (297)
T 3g4e_A 159 DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL 238 (297)
T ss_dssp TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC
T ss_pred CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC
Confidence 65556677778899999986 34432 222233445678999999998888877888999999998888888877
Q ss_pred cccceEEEEEe-eCCCEEEEEeC
Q 021247 284 HTDQVWGVSFR-PLGGRVVSVSD 305 (315)
Q Consensus 284 ~~~~v~~~~~s-~~~~~l~s~~~ 305 (315)
+...+++++|. |+++.|+.++.
T Consensus 239 p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 239 PVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp SSSBEEEEEEESGGGCEEEEEEB
T ss_pred CCCCceEEEEeCCCCCEEEEEcC
Confidence 77789999999 89887754443
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.66 E-value=3.9e-12 Score=104.19 Aligned_cols=237 Identities=8% Similarity=0.049 Sum_probs=167.0
Q ss_pred cccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeE-EeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcce
Q 021247 59 HCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIA-TLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNL 137 (315)
Q Consensus 59 h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~ 137 (315)
....+.++.+.++|.+.++...++.|.+||.. ++... .+......+..++++++++ ++++...++.|..+|.. ++.
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGD-IWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCE
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCC-EEEEecCCCeEEEECCC-CCe
Confidence 34577899999999988887778999999987 44332 2222335688999999887 45565667889999987 443
Q ss_pred eeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeee-eecCCccceEEEEEcCCCCcEE
Q 021247 138 IATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLH-HLEGHFMPVRSLVYSPVDPRVL 216 (315)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l 216 (315)
..+..+. ....+..+++.++|+.+++...++.|..+|.. ++... .+......+..+.+.+ +++++
T Consensus 95 -~~~~~~~-----------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~-~g~l~ 160 (300)
T 2qc5_A 95 -TEYPLPQ-----------PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGS-DNALW 160 (300)
T ss_dssp -EEEECSS-----------TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECT-TSSEE
T ss_pred -EEecCCC-----------CCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECC-CCCEE
Confidence 2232211 11237899999999888887778899999987 55432 2333345678999988 55677
Q ss_pred EEEeCCCeEEEEeCCCCeeEEE-eecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceeh-cccccccceEEEEEe
Q 021247 217 FSASDDTHVHMYDAEGKSLVTA-MSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQ-SMTNHTDQVWGVSFR 294 (315)
Q Consensus 217 ~s~~~d~~i~~wd~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~v~~~~~s 294 (315)
++...++.|..||.. ++.... ...+...+..+++++++.+.++...++.|.+|+. .++... ....+...+.+++++
T Consensus 161 v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d 238 (300)
T 2qc5_A 161 FTENQNNSIGRITNT-GKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAG 238 (300)
T ss_dssp EEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC
T ss_pred EEecCCCeEEEECCC-CcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEEC
Confidence 777778899999984 433332 2234456889999999987777667778999998 333322 123345678899999
Q ss_pred eCCCEEEEEeCCCcEEEeec
Q 021247 295 PLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 295 ~~~~~l~s~~~d~~i~i~~~ 314 (315)
++|+..++...++.|..|+.
T Consensus 239 ~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 239 KNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp STTCEEEEETTTTEEEEECT
T ss_pred CCCCEEEeccCCCeEEEECC
Confidence 99987777666788888864
No 206
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.61 E-value=1.4e-13 Score=117.40 Aligned_cols=254 Identities=13% Similarity=0.126 Sum_probs=170.3
Q ss_pred CcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEee----------CCCeEEEEECCCCceeEEeeCC-------c
Q 021247 40 ETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASAS----------LDSFVRVFDVDTNASIATLEAS-------P 102 (315)
Q Consensus 40 ~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~----------~d~~i~~w~~~~~~~~~~~~~~-------~ 102 (315)
+.|.++|..+.+....++--..+ .+.++|+|+.++.+. .++.|.++|..+.+.+..+... .
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 79999999999888776543344 899999998777664 4678999999999888776532 1
Q ss_pred ccEEEEEECCCCCeEEEEecC-CCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCC-CEEEEecCCC
Q 021247 103 SEVWQMQFDPKGTTLAVAGGG-SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDG-RRIACGSMDG 180 (315)
Q Consensus 103 ~~v~~~~~~~~~~~~~~~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~s~dg 180 (315)
.....+.++|++++++++... ++.|.++|+.+.+.+..+..+.. ....|++ +.+++.+.||
T Consensus 177 ~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~-----------------~~~~p~g~~~~v~~~~dG 239 (426)
T 3c75_H 177 TYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC-----------------YHIFPASPTVFYMNCRDG 239 (426)
T ss_dssp CCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-----------------EEEEEEETTEEEEEETTS
T ss_pred CCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc-----------------eeeccCCCcEEEEEcCCC
Confidence 223467899999998877643 68999999999998887765321 1122322 3445555667
Q ss_pred cEEEEEcccceeeee----ecCCccce-EEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEE--Eeec----------cc
Q 021247 181 TISVFDVTRAKFLHH----LEGHFMPV-RSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT--AMSG----------HA 243 (315)
Q Consensus 181 ~i~i~d~~~~~~~~~----~~~~~~~v-~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~--~~~~----------~~ 243 (315)
.+.+.++.+++.... +.....++ ..+.+.+.+.+++++ ...+.+.+.|..+..... ...- ..
T Consensus 240 ~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~-s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p 318 (426)
T 3c75_H 240 SLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWP-TYTGKIFQADLTAEGATFRAPIEALTEAERADDWRP 318 (426)
T ss_dssp SEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEE-BTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEE
T ss_pred CEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEE-eCCCcEEEEeccCCceEEeeeeeecccccccccccc
Confidence 766666644443321 11111121 124567755444444 567899999986543221 1110 01
Q ss_pred ccEEEEEEcCCCCeEEEEeC----------CCcEEEEecCccceehcccccccceEEEEEeeCCC-EEEEEe-CCCcEEE
Q 021247 244 SWVLSVDASPDGAAITTGSS----------DRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGG-RVVSVS-DDKSISL 311 (315)
Q Consensus 244 ~~i~~~~~~~~~~~l~s~~~----------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~-~d~~i~i 311 (315)
.....++++|+++.+++... ++.|.++|+.+.+.+.++..- ...++++|+|+|+ ++++.. .+++|.+
T Consensus 319 ~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsV 397 (426)
T 3c75_H 319 GGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHI 397 (426)
T ss_dssp CSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEE
T ss_pred CCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEE
Confidence 11123688999876655532 357999999999988887542 3588999999999 888887 5899999
Q ss_pred eec
Q 021247 312 YEY 314 (315)
Q Consensus 312 ~~~ 314 (315)
+|.
T Consensus 398 ID~ 400 (426)
T 3c75_H 398 YDA 400 (426)
T ss_dssp EET
T ss_pred EEC
Confidence 986
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.61 E-value=1.7e-12 Score=111.42 Aligned_cols=241 Identities=9% Similarity=0.058 Sum_probs=163.5
Q ss_pred ccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCC--eEEEEECCC
Q 021247 14 EESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDS--FVRVFDVDT 91 (315)
Q Consensus 14 ~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~--~i~~w~~~~ 91 (315)
-...+.|+|.|.++ ++++...++.|+.|++++..+......... .. +++++++..++.+..++ .|.+++...
T Consensus 130 ~~~P~~la~d~~g~----lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 130 FKYMWGIAAVGNNT----VLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKAS 203 (409)
T ss_dssp CCCEEEEEECSTTE----EEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGG
T ss_pred cCCceEEEEeCCCC----EEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCC
Confidence 34788999987553 566666779999999987766554433222 33 89999999888887766 799999876
Q ss_pred CceeEEe----eCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEEC
Q 021247 92 NASIATL----EASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS 167 (315)
Q Consensus 92 ~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 167 (315)
+.....+ ......+..++++|++..+++ +..++.|..||..+.............. ....+...++|+
T Consensus 204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~-------~~~~P~~~ia~~ 275 (409)
T 3hrp_A 204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGS-------LGTNPGPYLIYY 275 (409)
T ss_dssp TTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSC-------CCCSSCCEEEEE
T ss_pred CceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEEecccccCC-------CCCCccccEEEe
Confidence 6554443 213456778999996666666 5568899999987654322111100000 000011289999
Q ss_pred CC-CCEEEEecCCCcEEEEEcccceeeeeecCC---------------ccceEEEEEcCCCCcEEEEEe-CCCeEEEEeC
Q 021247 168 PD-GRRIACGSMDGTISVFDVTRAKFLHHLEGH---------------FMPVRSLVYSPVDPRVLFSAS-DDTHVHMYDA 230 (315)
Q Consensus 168 ~~-~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~~l~s~~-~d~~i~~wd~ 230 (315)
|+ +.++++...++.|+.||.... ...+.++ ......++++| +++++++-. .++.|+.|+.
T Consensus 276 p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~-dG~lyvad~~~~~~I~~~~~ 352 (409)
T 3hrp_A 276 FVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE-DGNFYIVDGFKGYCLRKLDI 352 (409)
T ss_dssp TTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT-TCCEEEEETTTTCEEEEEET
T ss_pred CCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC-CCCEEEEeCCCCCEEEEEEC
Confidence 95 666677778899999997643 2222221 23478999998 466888887 8899999997
Q ss_pred CCCeeEEEeecc---------------cccEEEEEEcCCCCeEEEEeCCCcEEEEec
Q 021247 231 EGKSLVTAMSGH---------------ASWVLSVDASPDGAAITTGSSDRTVKLWDL 272 (315)
Q Consensus 231 ~~~~~~~~~~~~---------------~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~ 272 (315)
..+.+. .+.++ -..+..++++|++.++++-..+++|+.+.+
T Consensus 353 ~~G~v~-~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 353 LDGYVS-TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTTEEE-EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCEEE-EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 666543 33333 246889999999888888888889988765
No 208
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.61 E-value=3.8e-13 Score=124.37 Aligned_cols=245 Identities=13% Similarity=0.012 Sum_probs=156.4
Q ss_pred hhccccceEEEEEeecCCCCCcEEEEeeC-CC----cEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCe-
Q 021247 10 ENAHEESVWAVTWVPATETRPALLLTGSL-DE----TVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSF- 83 (315)
Q Consensus 10 ~~~h~~~v~~v~~~~~~~~~~~~l~sgs~-d~----~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~- 83 (315)
..+|+..+..++|+|+++ .|+.++. +| .|++||.++++..... .+...+..+.|+|+ +.|+.++.|+.
T Consensus 158 ~~~~~~~~~~~~~SPDG~----~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~ 231 (741)
T 1yr2_A 158 AKDGATALDAWAASDDGR----LLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPK 231 (741)
T ss_dssp C----EEEEEEEECTTSS----EEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC-
T ss_pred ccCCCEEEEeEEECCCCC----EEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcc
Confidence 345656789999999876 3555443 34 5999999888764431 12222357889999 88887776654
Q ss_pred -------------EEEEECCCCce--eEEeeCC--cccEEEEEECCCCCeEEEEecC----CCeEEEEecCCc--ceeee
Q 021247 84 -------------VRVFDVDTNAS--IATLEAS--PSEVWQMQFDPKGTTLAVAGGG----SASVKLWDTATW--NLIAT 140 (315)
Q Consensus 84 -------------i~~w~~~~~~~--~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~----d~~i~~~d~~~~--~~~~~ 140 (315)
|++|++.++.. ...+... +..+..+.|+|+|+.++++... ...|.+||+.++ +....
T Consensus 232 ~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 311 (741)
T 1yr2_A 232 EGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTA 311 (741)
T ss_dssp -------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEE
T ss_pred cccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEE
Confidence 89999987653 2333322 2357899999999988776542 358999998765 30222
Q ss_pred ecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecC----CCcEEEEEcccc--eeeeeecCCccceEEEEEcCCCCc
Q 021247 141 LSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSM----DGTISVFDVTRA--KFLHHLEGHFMPVRSLVYSPVDPR 214 (315)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~----dg~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~~~~~~ 214 (315)
+..+. ...... ++|+|+.|+..+. ++.|.+||+.++ .....+..+...+..+.+. ++.
T Consensus 312 l~~~~-------------~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~ 375 (741)
T 1yr2_A 312 LIPDL-------------KAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNR 375 (741)
T ss_dssp EECSS-------------SSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTE
T ss_pred ecCCC-------------CceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCE
Confidence 22111 112222 3488888877665 345999999774 3333344444556677776 567
Q ss_pred EEEEEeCCCeEEEEeCC-CCeeEEEeec-ccccEEEEEEcCCCCeEE-E---EeCCCcEEEEecCccc
Q 021247 215 VLFSASDDTHVHMYDAE-GKSLVTAMSG-HASWVLSVDASPDGAAIT-T---GSSDRTVKLWDLNMRA 276 (315)
Q Consensus 215 ~l~s~~~d~~i~~wd~~-~~~~~~~~~~-~~~~i~~~~~~~~~~~l~-s---~~~d~~i~iwd~~~~~ 276 (315)
++++...|+..++|... .+.....+.. +.+.+..+.++|+++.++ + ....++|++||+.+++
T Consensus 376 lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 376 LFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 88888889876666433 2334444543 366788899999887555 2 2334789999998765
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.61 E-value=5.1e-12 Score=103.80 Aligned_cols=232 Identities=13% Similarity=0.117 Sum_probs=154.2
Q ss_pred hhhccccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEE
Q 021247 9 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFD 88 (315)
Q Consensus 9 ~~~~h~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~ 88 (315)
+...+..---+..|.|... .++++...++.|..|++++.+.... .....+.++.++++|.++++. ++.|.+||
T Consensus 7 ~~~~~~~~~Egp~w~~~~~---~l~~~d~~~~~i~~~d~~~~~~~~~--~~~~~~~~i~~~~dG~l~v~~--~~~l~~~d 79 (297)
T 3g4e_A 7 VLPENCRCGESPVWEEVSN---SLLFVDIPAKKVCRWDSFTKQVQRV--TMDAPVSSVALRQSGGYVATI--GTKFCALN 79 (297)
T ss_dssp EECCCCSBEEEEEEETTTT---EEEEEETTTTEEEEEETTTCCEEEE--ECSSCEEEEEEBTTSSEEEEE--TTEEEEEE
T ss_pred EeccCCccccCCeEECCCC---EEEEEECCCCEEEEEECCCCcEEEE--eCCCceEEEEECCCCCEEEEE--CCeEEEEE
Confidence 3344445566888988543 3677777889999999887654322 233568899999999966654 56899999
Q ss_pred CCCCceeEEeeC----CcccEEEEEECCCCCeEEEEecC--------CCeEEEEecCC-cceeeeecCCCCCCCCCCccC
Q 021247 89 VDTNASIATLEA----SPSEVWQMQFDPKGTTLAVAGGG--------SASVKLWDTAT-WNLIATLSIPRPEGLKPTDKS 155 (315)
Q Consensus 89 ~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~--------d~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~ 155 (315)
..+++....... ....+..++++|+|+.++.+... ...-.+|.+.. ++.....
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~-------------- 145 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYF-------------- 145 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEE--------------
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEe--------------
Confidence 987764333222 12357889999999854433221 12234444332 2211111
Q ss_pred CCCcceEEEEECCCCCEE-EEecCCCcEEEEEc--cccee-----eeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEE
Q 021247 156 SSKKFVLSVAWSPDGRRI-ACGSMDGTISVFDV--TRAKF-----LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 227 (315)
Q Consensus 156 ~~~~~i~~~~~~~~~~~l-~~~s~dg~i~i~d~--~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~ 227 (315)
........++|+|+++.| ++.+.++.|..||+ .++.. ...+..+...+..+++.+ ++++.++....+.|.+
T Consensus 146 ~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~-~G~lwva~~~~~~v~~ 224 (297)
T 3g4e_A 146 DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA-EGKLWVACYNGGRVIR 224 (297)
T ss_dssp EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT-TSCEEEEEETTTEEEE
T ss_pred eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC-CCCEEEEEcCCCEEEE
Confidence 011235789999999866 55677889999987 34432 222333345678899987 5678888888889999
Q ss_pred EeCCCCeeEEEeecccccEEEEEEc-CCCCeEEEEe
Q 021247 228 YDAEGKSLVTAMSGHASWVLSVDAS-PDGAAITTGS 262 (315)
Q Consensus 228 wd~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~s~~ 262 (315)
||.++++++..+..+...+++++|. |+++.|..++
T Consensus 225 ~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 225 LDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp ECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred EcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 9999888888877776789999998 7877664444
No 210
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.60 E-value=1.1e-11 Score=104.94 Aligned_cols=245 Identities=12% Similarity=0.021 Sum_probs=161.2
Q ss_pred EEEEeecCCCCCcEEEEee----------CCCcEEEEcCCCCcceeecccc-------ccceEEEEeCCCCCEEEEeeC-
Q 021247 19 AVTWVPATETRPALLLTGS----------LDETVKLWRPDDMQLERTNTGH-------CLGVVSVAAHPSGIIAASASL- 80 (315)
Q Consensus 19 ~v~~~~~~~~~~~~l~sgs----------~d~~v~~w~~~~~~~~~~~~~h-------~~~v~~~~~~~~g~~l~s~~~- 80 (315)
.++++|+++ .++.+. .++.|.+||..+.+....+.-- ......+.++|+|++|+.+..
T Consensus 70 ~i~~spDg~----~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~ 145 (373)
T 2mad_H 70 NPVAAHSGS----EFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA 145 (373)
T ss_pred CeEECCCCC----EEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC
Confidence 888999876 355554 3688999999877765543211 123558899999999887764
Q ss_pred -CCeEEEEECCCCceeEE-eeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCC
Q 021247 81 -DSFVRVFDVDTNASIAT-LEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSK 158 (315)
Q Consensus 81 -d~~i~~w~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (315)
+..|.++| .+++.+.. +.... . +.+.|.++..+++...|+.+.++|. +++.......... . ....
T Consensus 146 ~~~~v~viD-~t~~~~~~~i~~~~-~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~--~-----~~~~ 212 (373)
T 2mad_H 146 AGPAVGLVV-QGGSSDDQLLSSPT-C---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAM--L-----TAAQ 212 (373)
T ss_pred CCCeEEEEE-CCCCEEeEEcCCCc-e---EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEecccc--c-----cCCc
Confidence 57899999 98888777 54322 1 3445666556666778999999999 7766633211000 0 0000
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEEcccce--eeeeecCC----------ccceEEEEEcCCCCcEEEEEe------
Q 021247 159 KFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK--FLHHLEGH----------FMPVRSLVYSPVDPRVLFSAS------ 220 (315)
Q Consensus 159 ~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~--~~~~~~~~----------~~~v~~~~~~~~~~~~l~s~~------ 220 (315)
.......+.+++..++..+..+.+.+.|+.... .+..+... ......+.++|++.+++++..
T Consensus 213 p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~ 292 (373)
T 2mad_H 213 NLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWK 292 (373)
T ss_pred ceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCccc
Confidence 112234556665554444467899999986542 22222110 122344778885555555443
Q ss_pred ---CCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCC-eEEEEe-CCCcEEEEecCccceehcc
Q 021247 221 ---DDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGA-AITTGS-SDRTVKLWDLNMRAAMQSM 281 (315)
Q Consensus 221 ---~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~~-~d~~i~iwd~~~~~~~~~~ 281 (315)
..+.|.++|.++.+.+..+.. ......++|+|+|+ .++++. .++.|.++|+.+++.+.++
T Consensus 293 ~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 293 LHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred ccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 135799999999988887753 33578999999999 777776 5899999999998888773
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.58 E-value=1.7e-11 Score=102.05 Aligned_cols=224 Identities=14% Similarity=0.063 Sum_probs=148.6
Q ss_pred EEEEeCCC-CCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeec
Q 021247 64 VSVAAHPS-GIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS 142 (315)
Q Consensus 64 ~~~~~~~~-g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~ 142 (315)
....|+|+ +.++++...++.|..||..+++.. .+. .+..+.++.++|+++.++ +. ...|.+||..+++......
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v-~~--~~gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLI-AS--DDGLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEE-EE--TTEEEEEETTTCCEEEEEC
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEE-EE--CCCEEEEECCCCcEEEEee
Confidence 45678886 456677777899999999876543 333 245788999999987554 33 3459999987766433221
Q ss_pred CCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecC------CCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEE
Q 021247 143 IPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSM------DGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVL 216 (315)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 216 (315)
... ......+..++++|+|+++++... .+.|..+| +++... +..+......++|+|++..++
T Consensus 127 ~~~---------~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~ly 194 (326)
T 2ghs_A 127 LES---------DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGY 194 (326)
T ss_dssp SST---------TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEE
T ss_pred CCC---------CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEE
Confidence 110 011235789999999986665432 24566666 444332 222334567899998554555
Q ss_pred EEEeCCCeEEEEeCC--CC-ee-----EEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccce
Q 021247 217 FSASDDTHVHMYDAE--GK-SL-----VTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQV 288 (315)
Q Consensus 217 ~s~~~d~~i~~wd~~--~~-~~-----~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v 288 (315)
++.+.++.|.+||.. ++ .+ ...+......+..+.++++|.+.++...++.|.+|+. .++.+..+..+...+
T Consensus 195 v~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~ 273 (326)
T 2ghs_A 195 FVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQT 273 (326)
T ss_dssp EEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBE
T ss_pred EEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCc
Confidence 666678899999975 44 21 2222233455778999999987777767788999998 466666666666679
Q ss_pred EEEEEe-eCCCEEEEEeC
Q 021247 289 WGVSFR-PLGGRVVSVSD 305 (315)
Q Consensus 289 ~~~~~s-~~~~~l~s~~~ 305 (315)
++++|+ |+++.|+.++.
T Consensus 274 ~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 274 TCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEEEESTTSCEEEEEEB
T ss_pred EEEEEecCCCCEEEEEec
Confidence 999999 88887754443
No 212
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.56 E-value=2.3e-13 Score=114.67 Aligned_cols=184 Identities=13% Similarity=0.081 Sum_probs=131.3
Q ss_pred cEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEE
Q 021247 104 EVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS 183 (315)
Q Consensus 104 ~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~ 183 (315)
++..+++++....++ +|+.+ .+.+|++...+.... .......+........ |+.++| ++++|+++ .++.|+
T Consensus 39 ~~nlLais~~~gll~-a~~~~-~l~v~~~~~l~~~~~---~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~ 109 (388)
T 1xip_A 39 SLQNLDISNSKSLFV-AASGS-KAVVGELQLLRDHIT---SDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALY 109 (388)
T ss_dssp CCBCEEEETTTTEEE-EEETT-EEEEEEHHHHHHHHH---SSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEE
T ss_pred cccEEEEcCCCCEEE-EeCCC-EEEEEEhhHhhhhhc---cccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEE
Confidence 578889999888654 55554 677798764321000 0001111111112334 899999 88999998 889999
Q ss_pred EEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeC
Q 021247 184 VFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSS 263 (315)
Q Consensus 184 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~ 263 (315)
+||+.+.........|..++.++.+.+. . ++++..||.|.+||++.+.... +...|.+++|+|+| ++.|..
T Consensus 110 v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~ 180 (388)
T 1xip_A 110 SLDLEELSEFRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLK 180 (388)
T ss_dssp EEESSSTTCEEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEET
T ss_pred EEEchhhhccCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEc
Confidence 9999776655556667778888887753 2 8888999999999999776543 34579999999999 678999
Q ss_pred CCcEEEEecCccce--ehcc------c---ccccceEEEEEeeCCCEEEEEeC
Q 021247 264 DRTVKLWDLNMRAA--MQSM------T---NHTDQVWGVSFRPLGGRVVSVSD 305 (315)
Q Consensus 264 d~~i~iwd~~~~~~--~~~~------~---~~~~~v~~~~~s~~~~~l~s~~~ 305 (315)
||++++|+....+. .+++ . +|...|.++.|.+++.++++-+.
T Consensus 181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~ 233 (388)
T 1xip_A 181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGN 233 (388)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEEC
T ss_pred CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcC
Confidence 99999998876553 3333 2 36778999999999988887443
No 213
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.56 E-value=3.1e-11 Score=100.47 Aligned_cols=222 Identities=11% Similarity=0.026 Sum_probs=145.1
Q ss_pred ceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCcee
Q 021247 16 SVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASI 95 (315)
Q Consensus 16 ~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~ 95 (315)
-..+..|.|+.. .++++...++.|..|+.++.+..... ....+.++.++++|.++++. . ..|.+||..+++..
T Consensus 50 ~~egp~~~~~~~---~l~~~d~~~~~i~~~d~~~~~~~~~~--~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 50 LGEGPTFDPASG---TAWWFNILERELHELHLASGRKTVHA--LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLT 122 (326)
T ss_dssp BEEEEEEETTTT---EEEEEEGGGTEEEEEETTTTEEEEEE--CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEE
T ss_pred CCcCCeEeCCCC---EEEEEECCCCEEEEEECCCCcEEEEE--CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEE
Confidence 456788988643 36777778899999998776543221 23468899999999887754 3 45999999877653
Q ss_pred EEeeCC----cccEEEEEECCCCCeEEEEecC-----CCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEE
Q 021247 96 ATLEAS----PSEVWQMQFDPKGTTLAVAGGG-----SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW 166 (315)
Q Consensus 96 ~~~~~~----~~~v~~~~~~~~~~~~~~~~~~-----d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 166 (315)
...... ...+..+.++|+|+.++.+... .+.|..+| +++...... .......++|
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--------------~~~~~~~i~~ 186 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--------------DISIPNSICF 186 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--------------EESSEEEEEE
T ss_pred EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--------------CCcccCCeEE
Confidence 322211 2357899999999854332221 24555555 333221110 0112568999
Q ss_pred CCCCCEEE-EecCCCcEEEEEcc--cc-ee-----eeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEE
Q 021247 167 SPDGRRIA-CGSMDGTISVFDVT--RA-KF-----LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT 237 (315)
Q Consensus 167 ~~~~~~l~-~~s~dg~i~i~d~~--~~-~~-----~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~ 237 (315)
+|+++.++ +.+.++.|.+||+. ++ .. ...+......+..+.+.+ ++.++++...++.|.+||.. ++.+.
T Consensus 187 s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~-~G~lwva~~~~~~v~~~d~~-g~~~~ 264 (326)
T 2ghs_A 187 SPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGEGAVDRYDTD-GNHIA 264 (326)
T ss_dssp CTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEETTTEEEEECTT-CCEEE
T ss_pred cCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECC-CCCEEEEEeCCCEEEEECCC-CCEEE
Confidence 99998764 55667899999985 54 21 222323334567888887 56677777677899999984 55666
Q ss_pred EeecccccEEEEEEc-CCCCeEEEEe
Q 021247 238 AMSGHASWVLSVDAS-PDGAAITTGS 262 (315)
Q Consensus 238 ~~~~~~~~i~~~~~~-~~~~~l~s~~ 262 (315)
.+..+...+.+++|+ |++..|+.++
T Consensus 265 ~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 265 RYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred EEECCCCCcEEEEEecCCCCEEEEEe
Confidence 666666679999998 8877664444
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.54 E-value=8.8e-12 Score=102.75 Aligned_cols=231 Identities=12% Similarity=0.034 Sum_probs=149.9
Q ss_pred cceEEEEeCCCCC-EEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceee
Q 021247 61 LGVVSVAAHPSGI-IAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIA 139 (315)
Q Consensus 61 ~~v~~~~~~~~g~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~ 139 (315)
.......|+++|+ ++++...++.|..|+.. +. ...+......+..+.++++++ ++++...++.|.+||.. ++...
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~~~~~~~~gl~~d~dG~-l~v~~~~~~~v~~~~~~-g~~~~ 120 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVLLDATAFTNGNAVDAQQR-LVHCEHGRRAITRSDAD-GQAHL 120 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEEEESCSCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEE
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEEeCCCCccceeeECCCCC-EEEEECCCCEEEEECCC-CCEEE
Confidence 3456778899998 67777788999999984 43 344545566788999999988 44555566789999875 44322
Q ss_pred eecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEE----ecC-------------CCcEEEEEcccceeeeeecCCccc
Q 021247 140 TLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIAC----GSM-------------DGTISVFDVTRAKFLHHLEGHFMP 202 (315)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~----~s~-------------dg~i~i~d~~~~~~~~~~~~~~~~ 202 (315)
+.... .+ .....+..++++++|+..++ |+. .+.|+.+|..+++..... ....
T Consensus 121 -~~~~~-~~-------~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~ 189 (305)
T 3dr2_A 121 -LVGRY-AG-------KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH 189 (305)
T ss_dssp -EECEE-TT-------EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS
T ss_pred -EEecc-CC-------CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC
Confidence 21100 00 00122567999999998876 442 356888887666543332 3345
Q ss_pred eEEEEEcCCCCcEEEEEeCC------CeEEEEeCCCCeeE--EEe-ecccccEEEEEEcCCCCeEEEEeCCCcEEEEecC
Q 021247 203 VRSLVYSPVDPRVLFSASDD------THVHMYDAEGKSLV--TAM-SGHASWVLSVDASPDGAAITTGSSDRTVKLWDLN 273 (315)
Q Consensus 203 v~~~~~~~~~~~~l~s~~~d------~~i~~wd~~~~~~~--~~~-~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~ 273 (315)
...++|+|+ ++.|+.+... +.|.+|+.....+. ..+ ....+.+..+.++++|++.+ +..+ .|.+|+..
T Consensus 190 p~gl~~spd-g~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv-~~~~-gv~~~~~~ 266 (305)
T 3dr2_A 190 PNGLAFSPD-EQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWS-SSGT-GVCVFDSD 266 (305)
T ss_dssp EEEEEECTT-SSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEE-CCSS-EEEEECTT
T ss_pred CcceEEcCC-CCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEE-ecCC-cEEEECCC
Confidence 678999995 4544444433 78999998654311 111 11233455688999998544 4444 49999984
Q ss_pred ccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEE
Q 021247 274 MRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISL 311 (315)
Q Consensus 274 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i 311 (315)
++.+..+..+. .+.+++|+|+++.|..++.++..++
T Consensus 267 -g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 267 -GQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp -SCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred -CCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 55665555444 5889999999998888877655444
No 215
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.54 E-value=1.1e-12 Score=120.39 Aligned_cols=239 Identities=12% Similarity=0.079 Sum_probs=152.6
Q ss_pred ccccceEEEEeCCCCCEEE-----EeeCCCeEEEEECCCCceeEE-eeCCcccEEEEEECCCCCeEEEEecCC-------
Q 021247 58 GHCLGVVSVAAHPSGIIAA-----SASLDSFVRVFDVDTNASIAT-LEASPSEVWQMQFDPKGTTLAVAGGGS------- 124 (315)
Q Consensus 58 ~h~~~v~~~~~~~~g~~l~-----s~~~d~~i~~w~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~d------- 124 (315)
+|...+..+.++|+|++++ .|+.+..|++||+.+++.+.. +... ....++|+ +++.++++...+
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV--KFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE--ESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc--eeccEEEe-CCCEEEEEEecCccccccc
Confidence 3556788899999999887 233346799999999886543 2111 12466899 888887765442
Q ss_pred -----CeEEEEecCCcce--eeeecCCCCCCCCCCccCC-CCcceEEEEECCCCCEEEEec----CCCcEEEEEcccce-
Q 021247 125 -----ASVKLWDTATWNL--IATLSIPRPEGLKPTDKSS-SKKFVLSVAWSPDGRRIACGS----MDGTISVFDVTRAK- 191 (315)
Q Consensus 125 -----~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~s----~dg~i~i~d~~~~~- 191 (315)
..|++|++.+... ...+.. .. +..+...+.|+|+|++|+... ..+.|+++|+.++.
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~-----------~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~ 271 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGA-----------IPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA 271 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESC-----------SGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC
T ss_pred ccCCCcEEEEEECCCCcccceEEEec-----------CCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC
Confidence 3588888876432 111110 11 123467899999999885433 23589999997653
Q ss_pred eeeeecCCccceEEEEEcCCCCcEEEEEeCC---CeEEEEeCCCCee--EEEeecccccEEEEEEcCCCCeEEEEeCCC-
Q 021247 192 FLHHLEGHFMPVRSLVYSPVDPRVLFSASDD---THVHMYDAEGKSL--VTAMSGHASWVLSVDASPDGAAITTGSSDR- 265 (315)
Q Consensus 192 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---~~i~~wd~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~- 265 (315)
....+..+....... +++.++.+++....+ +.|..+|+.++.. ...+..|...+. .|+++++.|+....++
T Consensus 272 ~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g 348 (693)
T 3iuj_A 272 PLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDA 348 (693)
T ss_dssp CCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETT
T ss_pred ceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECC
Confidence 334444455444444 556566677666554 6899999887543 234555655554 8888888776655444
Q ss_pred --cEEEEecCccceehccc-ccccceEEEEEeeCCCEEEEEeCC----CcEEEeec
Q 021247 266 --TVKLWDLNMRAAMQSMT-NHTDQVWGVSFRPLGGRVVSVSDD----KSISLYEY 314 (315)
Q Consensus 266 --~i~iwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d----~~i~i~~~ 314 (315)
.|++|++..+. ...+. .....+..+.++|++..|+....+ ++|..||+
T Consensus 349 ~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 349 TARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp EEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred eeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence 68899987443 33332 233467778888888877655444 67777764
No 216
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.51 E-value=1.5e-12 Score=109.71 Aligned_cols=171 Identities=13% Similarity=0.031 Sum_probs=124.6
Q ss_pred ceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCc---------cee-eccccccceEEEEeCCCCCEEEEeeCCCeEE
Q 021247 16 SVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQ---------LER-TNTGHCLGVVSVAAHPSGIIAASASLDSFVR 85 (315)
Q Consensus 16 ~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~---------~~~-~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~ 85 (315)
.++.+++++... ++++|+.++ +++|+.+... ... ....+.. |..++| ++.+|+.+ .++.|+
T Consensus 39 ~~nlLais~~~g----ll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~ 109 (388)
T 1xip_A 39 SLQNLDISNSKS----LFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALY 109 (388)
T ss_dssp CCBCEEEETTTT----EEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEE
T ss_pred cccEEEEcCCCC----EEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEE
Confidence 689999988654 788888875 5559743221 111 1223445 999999 88898888 889999
Q ss_pred EEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEE
Q 021247 86 VFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVA 165 (315)
Q Consensus 86 ~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 165 (315)
+||+.+.........+..++..+.+.+. . ++.+..||++.+||+.+++.... ...|++++
T Consensus 110 v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~~~~~-----------------~~~Vs~v~ 169 (388)
T 1xip_A 110 SLDLEELSEFRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTKSTKQL-----------------AQNVTSFD 169 (388)
T ss_dssp EEESSSTTCEEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTTCCEEEE-----------------EESEEEEE
T ss_pred EEEchhhhccCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccCCccccc-----------------cCCceEEE
Confidence 9999887665566666677888777654 2 45567899999999987654321 12389999
Q ss_pred ECCCCCEEEEecCCCcEEEEEccccee--eeee------c---CCccceEEEEEcCCCCcEEEE
Q 021247 166 WSPDGRRIACGSMDGTISVFDVTRAKF--LHHL------E---GHFMPVRSLVYSPVDPRVLFS 218 (315)
Q Consensus 166 ~~~~~~~l~~~s~dg~i~i~d~~~~~~--~~~~------~---~~~~~v~~~~~~~~~~~~l~s 218 (315)
|+|+| ++.|..||.+++|+...... ...+ . +|...|.++.|.+ +..++++
T Consensus 170 WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~-~~~flv~ 230 (388)
T 1xip_A 170 VTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILS-PQDFLAV 230 (388)
T ss_dssp ECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESS-SSEEEEE
T ss_pred EcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEec-CCeEEEE
Confidence 99999 67888999999999877664 4444 2 3678899999997 5556654
No 217
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.50 E-value=1.2e-11 Score=103.76 Aligned_cols=248 Identities=10% Similarity=0.014 Sum_probs=155.4
Q ss_pred cceEEEEEeecCCCCCcEEEEee--CCCcEEEEcCCCCccee------eccccccceEEEEeCCCCCEEEEeeC-----C
Q 021247 15 ESVWAVTWVPATETRPALLLTGS--LDETVKLWRPDDMQLER------TNTGHCLGVVSVAAHPSGIIAASASL-----D 81 (315)
Q Consensus 15 ~~v~~v~~~~~~~~~~~~l~sgs--~d~~v~~w~~~~~~~~~------~~~~h~~~v~~~~~~~~g~~l~s~~~-----d 81 (315)
..+..|+++|.+. ++++.. .++.++||..++.++.. ...+|-..+..+.++++|.++++-.. +
T Consensus 17 ~~p~~va~~~~g~----~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTPDGR----LFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECTTSC----EEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSC
T ss_pred CCcceEEECCCCC----EEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCC
Confidence 6789999988764 566653 23435555543333321 11234567899999999987775433 5
Q ss_pred CeEEEEECCCCceeEEeeCC------cccEEEEEECCCCCeEEEEec---CCCeEEEEecCCcceeeeecCCCCC---CC
Q 021247 82 SFVRVFDVDTNASIATLEAS------PSEVWQMQFDPKGTTLAVAGG---GSASVKLWDTATWNLIATLSIPRPE---GL 149 (315)
Q Consensus 82 ~~i~~w~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~~---~d~~i~~~d~~~~~~~~~~~~~~~~---~~ 149 (315)
+.|.+||+.+++.+..+... ......++++|++..++++.. .++.|.+||..+++....+..+... ..
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence 78999999988876666532 124578899987666777765 6789999999877765544221000 00
Q ss_pred --CCCccC-----C------CCcceEEEEECCCCCEEEEecCCC-cEEEEEccc---c-----eeee--eecCCccceEE
Q 021247 150 --KPTDKS-----S------SKKFVLSVAWSPDGRRIACGSMDG-TISVFDVTR---A-----KFLH--HLEGHFMPVRS 205 (315)
Q Consensus 150 --~~~~~~-----~------~~~~i~~~~~~~~~~~l~~~s~dg-~i~i~d~~~---~-----~~~~--~~~~~~~~v~~ 205 (315)
...... . ....+..++|+|+++.|+.+...+ .+..++... + +... ...++......
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdg 252 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDG 252 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSC
T ss_pred ceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCce
Confidence 000000 0 012367899999999887776555 565555321 0 0000 11122334567
Q ss_pred EEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEee-cccccEEEEEEcCCCCeEEEEeCCCcE
Q 021247 206 LVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS-GHASWVLSVDASPDGAAITTGSSDRTV 267 (315)
Q Consensus 206 ~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~s~~~d~~i 267 (315)
+++++ ++.++++...++.|.+||.+.++...... .+...+.++++.++++++++.+..+.+
T Consensus 253 ia~d~-~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 253 ISIDK-DHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp EEECT-TCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred EEECC-CCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence 88887 57888888889999999985454433222 235678899999998888877755444
No 218
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.50 E-value=7.5e-12 Score=114.79 Aligned_cols=246 Identities=13% Similarity=0.028 Sum_probs=155.7
Q ss_pred hhhhccccceEEEEEeecCCCCCcEEEEe----eCCCcEEEEcCCCCcceeeccccccc--eEEEEeCCCCCEEEEeeCC
Q 021247 8 SVENAHEESVWAVTWVPATETRPALLLTG----SLDETVKLWRPDDMQLERTNTGHCLG--VVSVAAHPSGIIAASASLD 81 (315)
Q Consensus 8 ~~~~~h~~~v~~v~~~~~~~~~~~~l~sg----s~d~~v~~w~~~~~~~~~~~~~h~~~--v~~~~~~~~g~~l~s~~~d 81 (315)
..+.+|...+.+++|+|+++. +.++- +.+..|++||.++++.... +... ...+.|+ ||+.|+.++.+
T Consensus 122 ~la~~~~~~l~~~~~SpDg~~---lAy~~~~~G~~~~~i~v~dl~tg~~~~~---~~~~~k~~~~~Ws-Dg~~l~y~~~~ 194 (693)
T 3iuj_A 122 TLSPDGTTALDQLSFSRDGRI---LAYSLSLAGSDWREIHLMDVESKQPLET---PLKDVKFSGISWL-GNEGFFYSSYD 194 (693)
T ss_dssp GGSTTSCCEEEEEEECTTSSE---EEEEEECSSCCEEEEEEEETTTCSEEEE---EEEEEESCCCEEE-TTTEEEEEESS
T ss_pred hccCCCcEEEEEEEECCCCCE---EEEEEecCCCceEEEEEEECCCCCCCcc---ccCCceeccEEEe-CCCEEEEEEec
Confidence 344567778999999998762 33333 3335799999998875433 2222 2567899 99988887777
Q ss_pred C-------------eEEEEECCCCce--eEEeeC---CcccEEEEEECCCCCeEEEEecC---CCeEEEEecCCcc-eee
Q 021247 82 S-------------FVRVFDVDTNAS--IATLEA---SPSEVWQMQFDPKGTTLAVAGGG---SASVKLWDTATWN-LIA 139 (315)
Q Consensus 82 ~-------------~i~~w~~~~~~~--~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~---d~~i~~~d~~~~~-~~~ 139 (315)
. .|++|++.+... ...+.. ++.....+.++|+++.++++... ...|.++|+.+.+ ...
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~ 274 (693)
T 3iuj_A 195 KPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLL 274 (693)
T ss_dssp CCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCE
T ss_pred CcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceE
Confidence 4 399999987653 233322 23346789999999988776543 3589999987653 122
Q ss_pred eecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEec-C---CCcEEEEEccccee--eeeecCCccceEEEEEcCCCC
Q 021247 140 TLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS-M---DGTISVFDVTRAKF--LHHLEGHFMPVRSLVYSPVDP 213 (315)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s-~---dg~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~ 213 (315)
.+..+. ...... ++++|..|+..+ . .+.|..+|+.++.. ...+..|...+. .|++.+.
T Consensus 275 ~l~~~~-------------~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~ 338 (693)
T 3iuj_A 275 TVQGDL-------------DADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSG 338 (693)
T ss_dssp EEECSS-------------SSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETT
T ss_pred EEeCCC-------------CceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECC
Confidence 221111 112222 566666665433 3 35799999977543 234555555554 7887655
Q ss_pred cEEEEEeCCC--eEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCC----CcEEEEecCccc
Q 021247 214 RVLFSASDDT--HVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD----RTVKLWDLNMRA 276 (315)
Q Consensus 214 ~~l~s~~~d~--~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d----~~i~iwd~~~~~ 276 (315)
.++++...++ .|++||..++........+.+.+..+.++|++..++....+ ++|..||+..++
T Consensus 339 ~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 339 YLFAEYMVDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEEEEEEETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred EEEEEEEECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 5555555665 68899988664433222345567778888887766555444 789999987654
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.50 E-value=2.1e-12 Score=108.33 Aligned_cols=239 Identities=14% Similarity=0.119 Sum_probs=152.2
Q ss_pred cceEEEEeCCCCCEEEEee--CCCeEEEEECCCCceeEEee-------CCcccEEEEEECCCCCeEEEEecC-----CCe
Q 021247 61 LGVVSVAAHPSGIIAASAS--LDSFVRVFDVDTNASIATLE-------ASPSEVWQMQFDPKGTTLAVAGGG-----SAS 126 (315)
Q Consensus 61 ~~v~~~~~~~~g~~l~s~~--~d~~i~~w~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~~-----d~~ 126 (315)
..+..++++++|+++++.. .++.++||.+.+++ +..+. .+...+..++++++++.+ ++... +..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~-v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVW-MLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEE-EEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCcEE-EEcCCCCcCCCCe
Confidence 5688999999999998863 23435566655443 33221 123578999999997644 44332 578
Q ss_pred EEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCE-EEEec---CCCcEEEEEcccceeeeeecCCc--
Q 021247 127 VKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRR-IACGS---MDGTISVFDVTRAKFLHHLEGHF-- 200 (315)
Q Consensus 127 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~s---~dg~i~i~d~~~~~~~~~~~~~~-- 200 (315)
|.+||+.+++.+..+.++.... .....+..+++++++.. +++.. .++.|.+||+.+++....+.+|.
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~-------~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~ 167 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPIT-------LSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGI 167 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTS-------CTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTT
T ss_pred EEEEECCCCeEEEEEECChhhc-------ccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcc
Confidence 9999999888777776543211 11234678999986444 45555 67899999998777655443321
Q ss_pred ---------------------------cceEEEEEcCCCCcEEEEEeC-CCeEEEEeCC---CCe-----eEE--Eeecc
Q 021247 201 ---------------------------MPVRSLVYSPVDPRVLFSASD-DTHVHMYDAE---GKS-----LVT--AMSGH 242 (315)
Q Consensus 201 ---------------------------~~v~~~~~~~~~~~~l~s~~~-d~~i~~wd~~---~~~-----~~~--~~~~~ 242 (315)
..+..++|+|+ ++.|+.+.. ...+..++.. .+. ... ...++
T Consensus 168 ~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~d-g~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~ 246 (343)
T 2qe8_A 168 APEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAE-NEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSE 246 (343)
T ss_dssp SCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTT-SCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEE
T ss_pred cccccceeECCEEEEeccCCCceeceecccceeEeccC-CCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEeccc
Confidence 13578999984 555555544 4466666532 110 000 11123
Q ss_pred cccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccc-cccceEEEEEeeCCCEEEEEeCCCcE
Q 021247 243 ASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN-HTDQVWGVSFRPLGGRVVSVSDDKSI 309 (315)
Q Consensus 243 ~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i 309 (315)
.+....++++++|.++++...++.|.+||...++....... +...+.+++|.++|..+++.+..+.+
T Consensus 247 ~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 247 KPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp CCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred CCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence 33456789999999999998999999999844543222211 24568899999998877777654433
No 220
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.49 E-value=2.8e-11 Score=101.60 Aligned_cols=258 Identities=16% Similarity=0.140 Sum_probs=164.2
Q ss_pred EEEEeecCCCCCcEEEEee----------CCCcEEEEcCCCCcceeecccc-------ccceEEEEeCCCCCEEEEeeC-
Q 021247 19 AVTWVPATETRPALLLTGS----------LDETVKLWRPDDMQLERTNTGH-------CLGVVSVAAHPSGIIAASASL- 80 (315)
Q Consensus 19 ~v~~~~~~~~~~~~l~sgs----------~d~~v~~w~~~~~~~~~~~~~h-------~~~v~~~~~~~~g~~l~s~~~- 80 (315)
.++++|+++. ++.++ .++.|.+||..+.+....+.-. ......+.++|+|++++.+..
T Consensus 82 ~va~spDG~~----lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~ 157 (386)
T 3sjl_D 82 NPVVADDGSF----IAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS 157 (386)
T ss_dssp EEEECTTSSC----EEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS
T ss_pred cEEECCCCCE----EEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC
Confidence 4889998763 54444 4678999999998876654211 123557899999998887653
Q ss_pred -CCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCC-cceeeeecCCCCCCCCCCccCCCC
Q 021247 81 -DSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT-WNLIATLSIPRPEGLKPTDKSSSK 158 (315)
Q Consensus 81 -d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 158 (315)
++.|.++|+.+++.+.++.... +. ..+ |.+...+++.+.||.+.+.++.+ ++...... ....+ ..
T Consensus 158 ~~~~VsVID~~t~~vv~tI~v~g--~~-~~~-P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~----~~~~~-----~~ 224 (386)
T 3sjl_D 158 PAPAVGVVDLEGKAFKRMLDVPD--CY-HIF-PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHT----EVFHP-----ED 224 (386)
T ss_dssp SSCEEEEEETTTTEEEEEEECCS--EE-EEE-EEETTEEEEEETTSCEEEEECCSSSCCEEEEC----CCCSC-----TT
T ss_pred CCCeEEEEECCCCcEEEEEECCC--cc-eee-cCCCceeEEECCCCCEEEEECCCCCeEEEeec----ceecc-----cc
Confidence 6899999999999888886432 11 122 44433334556788888888876 44432111 01100 01
Q ss_pred cce-EEEEE-CCCCCEEEEecCCCcEEEEEcccce--eeeeec---------C-CccceEEEEEcCCCCcEEEEEeC---
Q 021247 159 KFV-LSVAW-SPDGRRIACGSMDGTISVFDVTRAK--FLHHLE---------G-HFMPVRSLVYSPVDPRVLFSASD--- 221 (315)
Q Consensus 159 ~~i-~~~~~-~~~~~~l~~~s~dg~i~i~d~~~~~--~~~~~~---------~-~~~~v~~~~~~~~~~~~l~s~~~--- 221 (315)
.++ ....| .++|++++ .+.+|.+++.|+.+.. ....+. + .......+.++|...+++++-..
T Consensus 225 ~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~ 303 (386)
T 3sjl_D 225 EFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDE 303 (386)
T ss_dssp SCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCT
T ss_pred ccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccc
Confidence 111 12355 36776555 4457899999996553 332221 0 11122346677755555554431
Q ss_pred ------CCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCC-eEEE-EeCCCcEEEEecCccceehcccccccceEEEEE
Q 021247 222 ------DTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGA-AITT-GSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSF 293 (315)
Q Consensus 222 ------d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s-~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 293 (315)
.+.|.++|.++++.+..+.-. ..+.+++++++++ .|++ ...++.|.++|..+++.++++..- +..+.+.+
T Consensus 304 ~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~ 381 (386)
T 3sjl_D 304 WRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVIT 381 (386)
T ss_dssp TCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEE
T ss_pred cccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEE
Confidence 257999999999988876532 3577999999986 5555 455899999999999988877543 33345667
Q ss_pred eeC
Q 021247 294 RPL 296 (315)
Q Consensus 294 s~~ 296 (315)
++|
T Consensus 382 s~d 384 (386)
T 3sjl_D 382 TAD 384 (386)
T ss_dssp ECC
T ss_pred CCc
Confidence 766
No 221
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.49 E-value=3.8e-12 Score=106.87 Aligned_cols=254 Identities=14% Similarity=0.027 Sum_probs=166.5
Q ss_pred EEEEeeCCC----cEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEee----------CCCeEEEEECCCCceeEE
Q 021247 32 LLLTGSLDE----TVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASAS----------LDSFVRVFDVDTNASIAT 97 (315)
Q Consensus 32 ~l~sgs~d~----~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~----------~d~~i~~w~~~~~~~~~~ 97 (315)
..++-..++ .|.++|.++.+....++.-..+ .+.++|+|+++..+. .++.|.+||+.+++.+.+
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~ 111 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIAD 111 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEE
Confidence 455555555 8889999999988877544445 799999998887765 368899999999999888
Q ss_pred eeCC-------cccEEEEEECCCCCeEEEEecC-CCeEEE--EecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEEC
Q 021247 98 LEAS-------PSEVWQMQFDPKGTTLAVAGGG-SASVKL--WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS 167 (315)
Q Consensus 98 ~~~~-------~~~v~~~~~~~~~~~~~~~~~~-d~~i~~--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 167 (315)
+... ......+.++|+++.++++... ...+.+ +|+.+ +..+..+.. ..+.
T Consensus 112 I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~-----------------~~~~ 171 (368)
T 1mda_H 112 IELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC-----------------FHIH 171 (368)
T ss_dssp EEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC-----------------CCCE
T ss_pred EECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc-----------------eEEc
Confidence 7643 1224478899999988877544 467888 99876 344432211 0112
Q ss_pred CCC-CEEEEecCCCcEEEEEccc-----ceeee----eecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe--e
Q 021247 168 PDG-RRIACGSMDGTISVFDVTR-----AKFLH----HLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKS--L 235 (315)
Q Consensus 168 ~~~-~~l~~~s~dg~i~i~d~~~-----~~~~~----~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~--~ 235 (315)
|++ ..+++.+.||.+.+.|+.+ ++... .+.....+. . .+.++.+++.. . +.+.+.|..... .
T Consensus 172 p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs-~-~~V~viD~~~~~~~v 245 (368)
T 1mda_H 172 PGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAV-A-SSILQGDIPAAGATM 245 (368)
T ss_dssp EEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECB-S-SCCEEEECCSSCCEE
T ss_pred cCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEc-C-CEEEEEECCCCcceE
Confidence 333 3445666788888888876 44321 111122333 2 45455444444 4 889999986532 2
Q ss_pred EEEeec-------cc---ccEEEEEEcCCCCeEEEEeC---------CCcEEEEecCccceehcccccccceEEEEEeeC
Q 021247 236 VTAMSG-------HA---SWVLSVDASPDGAAITTGSS---------DRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPL 296 (315)
Q Consensus 236 ~~~~~~-------~~---~~i~~~~~~~~~~~l~s~~~---------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~ 296 (315)
+..+.- +. .....+.++|+++.++.+.. ++.+.++|+.+++.+.++.... ..++++|+|+
T Consensus 246 ~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~D 324 (368)
T 1mda_H 246 KAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQD 324 (368)
T ss_dssp ECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCS
T ss_pred EEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCC
Confidence 222110 00 11112679999887765532 2356699999998888876543 6889999999
Q ss_pred CCE-EEEEe-CCCcEEEeec
Q 021247 297 GGR-VVSVS-DDKSISLYEY 314 (315)
Q Consensus 297 ~~~-l~s~~-~d~~i~i~~~ 314 (315)
|++ +++.. .+++|.++|.
T Consensus 325 g~~l~va~~~~~~~VsVID~ 344 (368)
T 1mda_H 325 GASDNYANSAGTEVLDIYDA 344 (368)
T ss_dssp SSCEEEEEETTTTEEEEEES
T ss_pred CCEEEEEccCCCCeEEEEEC
Confidence 985 56666 5999999986
No 222
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.48 E-value=1.9e-11 Score=104.35 Aligned_cols=246 Identities=14% Similarity=0.077 Sum_probs=162.6
Q ss_pred EEEEeecCCCCCcEEEEee----------CCCcEEEEcCCCCcceeecccc-------ccceEEEEeCCCCCEEEEeeC-
Q 021247 19 AVTWVPATETRPALLLTGS----------LDETVKLWRPDDMQLERTNTGH-------CLGVVSVAAHPSGIIAASASL- 80 (315)
Q Consensus 19 ~v~~~~~~~~~~~~l~sgs----------~d~~v~~w~~~~~~~~~~~~~h-------~~~v~~~~~~~~g~~l~s~~~- 80 (315)
.++++|+++. ++.+. .++.|.++|..+.+..+.+.-- ......+.++|+|++++.+..
T Consensus 122 gia~SpDgk~----lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~ 197 (426)
T 3c75_H 122 HPVAAEDGSF----FAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS 197 (426)
T ss_dssp EEEECTTSSC----EEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS
T ss_pred ceEECCCCCE----EEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC
Confidence 7899998763 55544 4779999999988877654310 123456789999998887764
Q ss_pred -CCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCc
Q 021247 81 -DSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKK 159 (315)
Q Consensus 81 -d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (315)
++.|.+.|+.+.+.+.++..... ....|.++..+++.+.|+.+.+.+..+++...... . .... ....
T Consensus 198 ~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~--~--~~~v----~~~p 265 (426)
T 3c75_H 198 PAPAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNT--E--VFHT----EDEL 265 (426)
T ss_dssp SSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEEC--C--CCSC----TTSC
T ss_pred CCCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEee--e--eecc----CCCc
Confidence 57899999999998888765322 22334444444555677888878875554442211 0 0000 0001
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEEcccceee--eeecC---C-------ccceEEEEEcCCCCcEEEEEeC------
Q 021247 160 FVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFL--HHLEG---H-------FMPVRSLVYSPVDPRVLFSASD------ 221 (315)
Q Consensus 160 ~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~--~~~~~---~-------~~~v~~~~~~~~~~~~l~s~~~------ 221 (315)
....+.+.+++..++..+..+.+.+.|+...... ..+.. . ......+.++|++.+++++...
T Consensus 266 ~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gth 345 (426)
T 3c75_H 266 LINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKH 345 (426)
T ss_dssp BCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCT
T ss_pred eeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccc
Confidence 1224567888887776677889999998654321 11110 0 0111236788866666665431
Q ss_pred ---CCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCC-eEEEEe-CCCcEEEEecCccceehcc
Q 021247 222 ---DTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGA-AITTGS-SDRTVKLWDLNMRAAMQSM 281 (315)
Q Consensus 222 ---d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~~-~d~~i~iwd~~~~~~~~~~ 281 (315)
.+.|.++|.++.+.+..+... .....+.|+|+++ .+++.. .++.|.++|+.+++.++++
T Consensus 346 k~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 346 KAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred cCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 357999999999988877532 2477899999998 888887 5999999999999988876
No 223
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.45 E-value=5.6e-11 Score=108.35 Aligned_cols=266 Identities=14% Similarity=0.151 Sum_probs=167.1
Q ss_pred cEEEEeeCCCcEEEEcCCCCcceeecccc-c----cceEEEEeCCCCCEEEEee-----CCCeEEEEECCCCceeEEeeC
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLERTNTGH-C----LGVVSVAAHPSGIIAASAS-----LDSFVRVFDVDTNASIATLEA 100 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~~~~~~h-~----~~v~~~~~~~~g~~l~s~~-----~d~~i~~w~~~~~~~~~~~~~ 100 (315)
..++.++.|+.|..+|..+++.......+ . ..+.+-..-.++.+++..+ .++.|+.+|..+++.+..+..
T Consensus 129 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 129 GKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 46888899999999999988876655432 1 1111100111344444332 279999999999998877654
Q ss_pred Cccc--------------------------------EEEEEECCCCCeEEEEecCCC-------------------eEEE
Q 021247 101 SPSE--------------------------------VWQMQFDPKGTTLAVAGGGSA-------------------SVKL 129 (315)
Q Consensus 101 ~~~~--------------------------------v~~~~~~~~~~~~~~~~~~d~-------------------~i~~ 129 (315)
.... ...++++|++..+++. ..++ .|..
T Consensus 209 ~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~-~~~~~~w~~~~~~~~~gd~~~~~sv~A 287 (677)
T 1kb0_A 209 VPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVG-TGNGSPWSHKVRSPKGGDNLYLASIVA 287 (677)
T ss_dssp SCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEE-CCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred CCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEE-CCCCccccCCCCCccCCCCeeeEEEEE
Confidence 3211 1246788887766554 3332 5999
Q ss_pred EecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCC---CEEEEecCCCcEEEEEcccceeeeeecCCc------
Q 021247 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDG---RRIACGSMDGTISVFDVTRAKFLHHLEGHF------ 200 (315)
Q Consensus 130 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~------ 200 (315)
+|.++++.+..+......... ...... ..-+....+| ..++.++.+|.++++|..+++.+.......
T Consensus 288 lD~~TG~~~W~~~~~~~d~wd---~~~~~~-p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 288 LDPDTGKYKWHYQETPGDNWD---YTSTQP-MILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp ECTTTCCEEEEEESSTTCCSC---CCCCSC-CEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EECCCCCEEEEEecCCCcccc---cccCCC-cEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence 999999999887653221100 000011 1122333467 678899999999999999998765443110
Q ss_pred -----cce------------------------EEEEEcCCCCcEEEEEeC------------------------------
Q 021247 201 -----MPV------------------------RSLVYSPVDPRVLFSASD------------------------------ 221 (315)
Q Consensus 201 -----~~v------------------------~~~~~~~~~~~~l~s~~~------------------------------ 221 (315)
.++ ..++++|..+ +++....
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 442 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG-LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNT 442 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT-EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC-EEEEeChhcceeeeccccccccccccccccccccccc
Confidence 111 1456777444 4444322
Q ss_pred -------------CCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccc-cc
Q 021247 222 -------------DTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHT-DQ 287 (315)
Q Consensus 222 -------------d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~ 287 (315)
.+.|..||+.+++.+-.... ...+....+...+.+++.++.|+.+++||.++++.+.++.... ..
T Consensus 443 g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~ 521 (677)
T 1kb0_A 443 AKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVV 521 (677)
T ss_dssp CEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred ccccccccCCCCCccEEEEEeCCCCcEEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcc
Confidence 27899999999887655542 2233444456677788889999999999999999887765332 22
Q ss_pred eEEEEEeeCCCEEEEE
Q 021247 288 VWGVSFRPLGGRVVSV 303 (315)
Q Consensus 288 v~~~~~s~~~~~l~s~ 303 (315)
..-+.+.++|+.++..
T Consensus 522 ~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 522 AAPSTYMVDGRQYVSV 537 (677)
T ss_dssp SCCEEEEETTEEEEEE
T ss_pred cCCEEEEeCCEEEEEE
Confidence 3345678888755443
No 224
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.44 E-value=2e-09 Score=86.79 Aligned_cols=244 Identities=7% Similarity=0.038 Sum_probs=155.9
Q ss_pred CcEEEEcCCCCcce-----eeccccccceEEEEeCCCC-CEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCC
Q 021247 40 ETVKLWRPDDMQLE-----RTNTGHCLGVVSVAAHPSG-IIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPK 113 (315)
Q Consensus 40 ~~v~~w~~~~~~~~-----~~~~~h~~~v~~~~~~~~g-~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~ 113 (315)
+.|+.++.+..... ..+......+..+.+++++ .++++-..++.|..+++........+.........++++|.
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~ 89 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHL 89 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETT
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEec
Confidence 47787877654321 1111122356788999865 55566666789999999766543333333346788999998
Q ss_pred CCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEE-EEecC--CCcEEEEEcccc
Q 021247 114 GTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI-ACGSM--DGTISVFDVTRA 190 (315)
Q Consensus 114 ~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~s~--dg~i~i~d~~~~ 190 (315)
+..++++....+.|.+++........... . .......++++|++..| ++... .+.|..+++...
T Consensus 90 ~~~lyv~d~~~~~I~~~~~~g~~~~~~~~--~-----------~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~ 156 (267)
T 1npe_A 90 GRTIFWTDSQLDRIEVAKMDGTQRRVLFD--T-----------GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT 156 (267)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEEC--S-----------SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred CCeEEEEECCCCEEEEEEcCCCCEEEEEE--C-----------CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence 77788887778899999986432211111 0 01235789999965555 44433 468888887543
Q ss_pred eeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEE
Q 021247 191 KFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270 (315)
Q Consensus 191 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iw 270 (315)
...............++++|.++.++++-...+.|.++|..+......... ......++.. .+.++++...++.|..+
T Consensus 157 ~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~ 234 (267)
T 1npe_A 157 NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAM 234 (267)
T ss_dssp CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEE
Confidence 221111222345788999986667777777889999999986544333332 3345677765 44455555567899999
Q ss_pred ecCccceehcccccc-cceEEEEEeeCCC
Q 021247 271 DLNMRAAMQSMTNHT-DQVWGVSFRPLGG 298 (315)
Q Consensus 271 d~~~~~~~~~~~~~~-~~v~~~~~s~~~~ 298 (315)
|..+++.+.++.... ...+++++.|++.
T Consensus 235 d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 235 DLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp ETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred eCCCCCceEEEccccccccceeeecCccC
Confidence 999888777765332 2477888998865
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.42 E-value=1.1e-10 Score=106.67 Aligned_cols=280 Identities=16% Similarity=0.140 Sum_probs=175.3
Q ss_pred cEEEEeeCCCcEEEEcCCCCcceeecccccc----------ce-EEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEee
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCL----------GV-VSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLE 99 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~----------~v-~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~ 99 (315)
..++.++.++.|.-+|..+++.......... .+ ..+.+ .+..++.++.|+.|..+|..+++.+..+.
T Consensus 71 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~~ 148 (689)
T 1yiq_A 71 GVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSVD 148 (689)
T ss_dssp TEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeeec
Confidence 4678888899999999988887665432211 00 01111 34577778889999999999999887765
Q ss_pred CC-c-ccEEEEEECC--CCCeEEEEec-----CCCeEEEEecCCcceeeeecCCCCCCCCCCc----------cC-----
Q 021247 100 AS-P-SEVWQMQFDP--KGTTLAVAGG-----GSASVKLWDTATWNLIATLSIPRPEGLKPTD----------KS----- 155 (315)
Q Consensus 100 ~~-~-~~v~~~~~~~--~~~~~~~~~~-----~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~----------~~----- 155 (315)
.. . .....+...| .+..+++..+ .++.|..||.++++.+..+............ ..
T Consensus 149 ~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~ 228 (689)
T 1yiq_A 149 TRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYV 228 (689)
T ss_dssp CCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHH
T ss_pred CcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceee
Confidence 42 1 1101111111 1233444322 3689999999999998877532110000000 00
Q ss_pred ---CCCcceEEEEECCCCCEEEEecCCCc-------------------EEEEEcccceeeeeecC--Cc-------cceE
Q 021247 156 ---SSKKFVLSVAWSPDGRRIACGSMDGT-------------------ISVFDVTRAKFLHHLEG--HF-------MPVR 204 (315)
Q Consensus 156 ---~~~~~i~~~~~~~~~~~l~~~s~dg~-------------------i~i~d~~~~~~~~~~~~--~~-------~~v~ 204 (315)
........++++|+++.++.++.++. |..+|..+++.+-.+.. |. .+..
T Consensus 229 ~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~ 308 (689)
T 1yiq_A 229 EQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMI 308 (689)
T ss_dssp HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEE
T ss_pred ecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcE
Confidence 00011135788898889988887764 99999999987755442 21 1121
Q ss_pred EEEEcCCCCc---EEEEEeCCCeEEEEeCCCCeeEEEeecc-cccE----------------------------------
Q 021247 205 SLVYSPVDPR---VLFSASDDTHVHMYDAEGKSLVTAMSGH-ASWV---------------------------------- 246 (315)
Q Consensus 205 ~~~~~~~~~~---~l~s~~~d~~i~~wd~~~~~~~~~~~~~-~~~i---------------------------------- 246 (315)
...... +++ .++.++.+|.++++|.++++++....-. ..+.
T Consensus 309 l~d~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~G 387 (689)
T 1yiq_A 309 LAELPI-DGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWG 387 (689)
T ss_dssp EEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTC
T ss_pred EEeecc-CCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCccc
Confidence 112111 333 7888999999999999998876432110 0011
Q ss_pred ----EEEEEcCCCCeEEEEeC---------------------------------------------CCcEEEEecCccce
Q 021247 247 ----LSVDASPDGAAITTGSS---------------------------------------------DRTVKLWDLNMRAA 277 (315)
Q Consensus 247 ----~~~~~~~~~~~l~s~~~---------------------------------------------d~~i~iwd~~~~~~ 277 (315)
..++++|+..++++... +|.|+.||+++++.
T Consensus 388 g~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~ 467 (689)
T 1yiq_A 388 AHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQA 467 (689)
T ss_dssp SSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEE
T ss_pred ccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCe
Confidence 12678888777776532 37799999999887
Q ss_pred ehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 278 MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 278 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
+-+...+ .+.+.-.++..+..|+.++.||.++.||.
T Consensus 468 ~W~~~~~-~~~~~g~~~tagglvf~gt~dg~l~a~D~ 503 (689)
T 1yiq_A 468 AWEVPYV-TIFNGGTLSTAGNLVFEGSADGRVIAYAA 503 (689)
T ss_dssp EEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred EeEccCC-CCccCccceECCCEEEEECCCCcEEEEEC
Confidence 6555443 33444567788899999999999999985
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.39 E-value=1.5e-10 Score=105.48 Aligned_cols=278 Identities=13% Similarity=0.101 Sum_probs=179.1
Q ss_pred cEEEEeeCCCcEEEEcCCCCcceeecccccc-----------ceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEee
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCL-----------GVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLE 99 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~-----------~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~ 99 (315)
..++.++.++.|.-+|..+++.......... ....+.+ .+..++.++.|+.+..+|..+++.+..+.
T Consensus 78 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 155 (677)
T 1kb0_A 78 GIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQN 155 (677)
T ss_dssp TEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeeec
Confidence 4577888889999999988877655432110 0011122 35577778889999999999999888776
Q ss_pred CC-c----ccEEE-EEECCCCCeEEEEec-----CCCeEEEEecCCcceeeeecCCCCCCCCCCc-----------c---
Q 021247 100 AS-P----SEVWQ-MQFDPKGTTLAVAGG-----GSASVKLWDTATWNLIATLSIPRPEGLKPTD-----------K--- 154 (315)
Q Consensus 100 ~~-~----~~v~~-~~~~~~~~~~~~~~~-----~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~-----------~--- 154 (315)
.. . ..+.. ... .+..+++... .++.|..+|..+++.+..+....+....+.. .
T Consensus 156 ~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g 233 (677)
T 1kb0_A 156 TFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSG 233 (677)
T ss_dssp TTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGG
T ss_pred CCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccC
Confidence 54 1 11110 001 1334444333 2689999999999999887654322100000 0
Q ss_pred -----CCCCcceEEEEECCCCCEEEEecCCC-------------------cEEEEEcccceeeeeecC--Cc-------c
Q 021247 155 -----SSSKKFVLSVAWSPDGRRIACGSMDG-------------------TISVFDVTRAKFLHHLEG--HF-------M 201 (315)
Q Consensus 155 -----~~~~~~i~~~~~~~~~~~l~~~s~dg-------------------~i~i~d~~~~~~~~~~~~--~~-------~ 201 (315)
.........++++|++..++.++.++ .|..+|..+++.+-.+.. |. .
T Consensus 234 ~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~ 313 (677)
T 1kb0_A 234 KWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQ 313 (677)
T ss_dssp CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCS
T ss_pred ceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCC
Confidence 00011123578889888888877664 499999999987655432 21 1
Q ss_pred ceEEEEEcCCCC---cEEEEEeCCCeEEEEeCCCCeeEEEeeccc-cc----------E---------------------
Q 021247 202 PVRSLVYSPVDP---RVLFSASDDTHVHMYDAEGKSLVTAMSGHA-SW----------V--------------------- 246 (315)
Q Consensus 202 ~v~~~~~~~~~~---~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~-~~----------i--------------------- 246 (315)
....+.... ++ ..++.++.+|.++++|.++++++....-.. .+ +
T Consensus 314 ~p~l~~~~~-dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~ 392 (677)
T 1kb0_A 314 PMILADIKI-AGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGA 392 (677)
T ss_dssp CCEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCS
T ss_pred CcEEEeccc-CCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccc
Confidence 122222222 34 678899999999999999988775543110 11 1
Q ss_pred ---EEEEEcCCCCeEEEEeC-------------------------------------------CCcEEEEecCccceehc
Q 021247 247 ---LSVDASPDGAAITTGSS-------------------------------------------DRTVKLWDLNMRAAMQS 280 (315)
Q Consensus 247 ---~~~~~~~~~~~l~s~~~-------------------------------------------d~~i~iwd~~~~~~~~~ 280 (315)
..++++|+..++++... .+.|..||+.+++.+-+
T Consensus 393 ~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~ 472 (677)
T 1kb0_A 393 HNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWS 472 (677)
T ss_dssp SCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEE
T ss_pred cCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEee
Confidence 14678888887777543 27899999999876544
Q ss_pred ccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 281 MTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 281 ~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
.. +..++++..+++++..++.++.||.+++||.
T Consensus 473 ~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~ 505 (677)
T 1kb0_A 473 VE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHA 505 (677)
T ss_dssp EE-ESSSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred cC-CCCCCcCcceEeCCCEEEEECCCCcEEEEEC
Confidence 43 3345566678888899999999999999985
No 227
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.39 E-value=8.4e-15 Score=124.13 Aligned_cols=253 Identities=14% Similarity=0.034 Sum_probs=133.5
Q ss_pred CcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcc-cEE-E
Q 021247 30 PALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPS-EVW-Q 107 (315)
Q Consensus 30 ~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~-~v~-~ 107 (315)
...+++++.||.|+.||..+++....... .++.+..+..++.++++++.|+.|+.||..+++.+.....+.. .+. .
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence 35799999999999999999888776654 4555555667787888888999999999998887665543311 110 0
Q ss_pred EEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEc
Q 021247 108 MQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 187 (315)
Q Consensus 108 ~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~ 187 (315)
..+. .+. .+++++.++.+..||.++++.+..+..+. ...++|++..+++++.++.|+.||.
T Consensus 87 p~~~-~~~-~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-----------------~~~~~p~~~~v~~~~~dg~v~a~d~ 147 (369)
T 2hz6_A 87 PCRS-SDG-ILYMGKKQDIWYVIDLLTGEKQQTLSSAF-----------------ADSLSPSTSLLYLGRTEYTITMYDT 147 (369)
T ss_dssp SCC-------CCCCEEEEEEEEECCC---------------------------------------EEEEEEEEEEECCCS
T ss_pred ceEe-cCC-EEEEEeCCCEEEEEECCCCcEEEEecCCC-----------------cccccccCCEEEEEecCCEEEEEEC
Confidence 0011 223 34566778999999999988876654221 1233467888999999999999999
Q ss_pred ccceeeeeecCCccceEEEEEcCCC--CcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEE-EEEcCCCCeE----EE
Q 021247 188 TRAKFLHHLEGHFMPVRSLVYSPVD--PRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLS-VDASPDGAAI----TT 260 (315)
Q Consensus 188 ~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l----~s 260 (315)
++++.+-.+..+. .....+.+.. ...++.++.|+.++.||.++++.+-...- ..++.. ..+++++... +.
T Consensus 148 ~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~pv~~~~~~~~dg~~~v~~~~~ 224 (369)
T 2hz6_A 148 KTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY-ASPVVAFYVWQREGLRKVMHINV 224 (369)
T ss_dssp SSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC-SSCEEEEEECTTSSCEEECCEEE
T ss_pred CCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC-CCceEEEEEecCCceEeccceee
Confidence 9887654433211 1111222210 14577788999999999998877655442 333433 3445555321 11
Q ss_pred EeCCCcEEEEecCccc----eehcccccccceEEEEEee--CCCEEEEEeCCCcEEEee
Q 021247 261 GSSDRTVKLWDLNMRA----AMQSMTNHTDQVWGVSFRP--LGGRVVSVSDDKSISLYE 313 (315)
Q Consensus 261 ~~~d~~i~iwd~~~~~----~~~~~~~~~~~v~~~~~s~--~~~~l~s~~~d~~i~i~~ 313 (315)
+ ++.++.+|..+++ .+-.... .+.+. +| .+..|+.++.||.+..++
T Consensus 225 ~--~~~l~~ld~~tG~~~~~~~W~~~~-~~~~~----sp~~~~g~lyv~~~~G~l~al~ 276 (369)
T 2hz6_A 225 A--VETLRYLTFMSGEVGRITKWKYPF-PKETE----AKSKLTPTLYVGKYSTSLYASP 276 (369)
T ss_dssp E--HHHHHHHHHHHHHHHHHHTSCCCC-CCHHH----HHHHSEEEECBEECSSCEECCE
T ss_pred c--ccceeeeehhcCCcccceeeeecc-Ccccc----ccccccceEEEecccCCEEecC
Confidence 1 3445666665554 2211111 01110 11 234677777777776654
No 228
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.39 E-value=6.2e-10 Score=91.65 Aligned_cols=224 Identities=13% Similarity=0.069 Sum_probs=143.4
Q ss_pred ccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCc
Q 021247 14 EESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA 93 (315)
Q Consensus 14 ~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~ 93 (315)
.....+..|.|.++ .+++++..++.|..|+.. .+. ..+..+...+..+.++++|+++++...++.|.+|+.. ++
T Consensus 44 ~~~~egp~~~~~g~---~l~~~d~~~~~i~~~~~~-g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~ 117 (305)
T 3dr2_A 44 ATWSEGPAWWEAQR---TLVWSDLVGRRVLGWRED-GTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ 117 (305)
T ss_dssp CSSEEEEEEEGGGT---EEEEEETTTTEEEEEETT-SCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CcCccCCeEeCCCC---EEEEEECCCCEEEEEeCC-CCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC
Confidence 34567889998764 368888889999999873 432 3333445668899999999988776667889999986 44
Q ss_pred eeEEeeCC-----cccEEEEEECCCCCeEEEE----ecC-------------CCeEEEEecCCcceeeeecCCCCCCCCC
Q 021247 94 SIATLEAS-----PSEVWQMQFDPKGTTLAVA----GGG-------------SASVKLWDTATWNLIATLSIPRPEGLKP 151 (315)
Q Consensus 94 ~~~~~~~~-----~~~v~~~~~~~~~~~~~~~----~~~-------------d~~i~~~d~~~~~~~~~~~~~~~~~~~~ 151 (315)
. ..+... ...+..+.++|+|+.+ ++ |.. .+.|..+|..+++.....
T Consensus 118 ~-~~~~~~~~~~~~~~~~~i~~d~dG~l~-~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---------- 185 (305)
T 3dr2_A 118 A-HLLVGRYAGKRLNSPNDLIVARDGAIW-FTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---------- 185 (305)
T ss_dssp E-EEEECEETTEECSCCCCEEECTTSCEE-EECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE----------
T ss_pred E-EEEEeccCCCccCCCCCEEECCCCCEE-EeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe----------
Confidence 3 222111 1235678899998744 44 221 245777776554433211
Q ss_pred CccCCCCcceEEEEECCCCCEEEEecCC------CcEEEEEcccceee--eee-cCCccceEEEEEcCCCCcEEEEEeCC
Q 021247 152 TDKSSSKKFVLSVAWSPDGRRIACGSMD------GTISVFDVTRAKFL--HHL-EGHFMPVRSLVYSPVDPRVLFSASDD 222 (315)
Q Consensus 152 ~~~~~~~~~i~~~~~~~~~~~l~~~s~d------g~i~i~d~~~~~~~--~~~-~~~~~~v~~~~~~~~~~~~l~s~~~d 222 (315)
.......++|+|+++.|+.+... +.|..||+...... ..+ .........+.+.+ ++++.++ ..+
T Consensus 186 -----~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~-~G~lwv~-~~~ 258 (305)
T 3dr2_A 186 -----DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDR-GGWLWSS-SGT 258 (305)
T ss_dssp -----EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECT-TSCEEEC-CSS
T ss_pred -----cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECC-CCCEEEe-cCC
Confidence 01125689999999977666544 68999998654311 111 11223345677877 4554444 444
Q ss_pred CeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCC
Q 021247 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDR 265 (315)
Q Consensus 223 ~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~ 265 (315)
.|.+|+.++ +.+..+..+. .+.+++|+|+++.|..++.++
T Consensus 259 -gv~~~~~~g-~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 259 -GVCVFDSDG-QLLGHIPTPG-TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp -EEEEECTTS-CEEEEEECSS-CCCEEEECTTSCEEEEEETTE
T ss_pred -cEEEECCCC-CEEEEEECCC-ceeEEEEeCCCCEEEEEcCCe
Confidence 499999854 4555554433 578899999988887777654
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.37 E-value=8.8e-10 Score=93.38 Aligned_cols=223 Identities=13% Similarity=0.147 Sum_probs=145.4
Q ss_pred CCCCEE-EEeeCCCeEEEEECCCC----ceeEEee-------CCcccEEEEEECCCCCeEEEEecCC------CeEEEEe
Q 021247 70 PSGIIA-ASASLDSFVRVFDVDTN----ASIATLE-------ASPSEVWQMQFDPKGTTLAVAGGGS------ASVKLWD 131 (315)
Q Consensus 70 ~~g~~l-~s~~~d~~i~~w~~~~~----~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~~d------~~i~~~d 131 (315)
+++++| +++-.++.|+++|+.+. +...+++ .....--.+...|++ +++++.++ +.+.++|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEE
Confidence 667655 56777889999999755 4445552 111233456678988 55565555 7899999
Q ss_pred cCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEec-------------------CCCcEEEEEccccee
Q 021247 132 TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS-------------------MDGTISVFDVTRAKF 192 (315)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s-------------------~dg~i~i~d~~~~~~ 192 (315)
..+.+.+.++....... ..-..+-|+|+++.+++.. .+.+|.+||+.+++.
T Consensus 171 ~~T~~v~~~~~~~~~~~----------~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~ 240 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQ----------YLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR 240 (462)
T ss_dssp TTTCCEEEECCSBCTTC----------CCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE
T ss_pred CCCCeEEEEEccCCCCc----------cccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE
Confidence 99999998886442211 1123577899999888774 367999999998887
Q ss_pred eeeecCC--ccceEEEEE--cCCCCcEEEEEe-----CCCeEEEEeCCCCeeE--EE--eecc----------------c
Q 021247 193 LHHLEGH--FMPVRSLVY--SPVDPRVLFSAS-----DDTHVHMYDAEGKSLV--TA--MSGH----------------A 243 (315)
Q Consensus 193 ~~~~~~~--~~~v~~~~~--~~~~~~~l~s~~-----~d~~i~~wd~~~~~~~--~~--~~~~----------------~ 243 (315)
+..+... ....+.+.| +|++...++++- .++.|.+|....+... +. +... .
T Consensus 241 ~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~ 320 (462)
T 2ece_A 241 IHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVP 320 (462)
T ss_dssp EEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEEC
T ss_pred eeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCC
Confidence 7776542 123455655 885555555555 6778877665443211 11 1110 1
Q ss_pred ccEEEEEEcCCCCeEEEEeC-CCcEEEEecCcc---ceehcccccc--------------cceEEEEEeeCCCEEEEEe
Q 021247 244 SWVLSVDASPDGAAITTGSS-DRTVKLWDLNMR---AAMQSMTNHT--------------DQVWGVSFRPLGGRVVSVS 304 (315)
Q Consensus 244 ~~i~~~~~~~~~~~l~s~~~-d~~i~iwd~~~~---~~~~~~~~~~--------------~~v~~~~~s~~~~~l~s~~ 304 (315)
..+..+.++|+|++|.++.. .+.|.+||+... +.+..+.... +....+.++|||++|+.+.
T Consensus 321 ~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 321 PLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 34678999999998866554 678999998522 3333332210 1357899999999998887
No 230
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.36 E-value=2.1e-09 Score=91.08 Aligned_cols=264 Identities=11% Similarity=0.074 Sum_probs=161.4
Q ss_pred cEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccE-----
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEV----- 105 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v----- 105 (315)
..++.++.++.|..+|.++++................. .+..++.++.++.+..+|..+++.+..........
T Consensus 104 ~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~ 181 (376)
T 3q7m_A 104 GHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGE 181 (376)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence 36888899999999999888776544322111111111 13466778889999999999998877665432111
Q ss_pred EEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccC--CCCcceEEEEECCCCCEEEEecCCCcEE
Q 021247 106 WQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKS--SSKKFVLSVAWSPDGRRIACGSMDGTIS 183 (315)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~s~dg~i~ 183 (315)
...... +.. ++.+..++.+..+|..+++.+.......+.+....... ....++ . .+..++.++.++.+.
T Consensus 182 ~~~~~~--~~~-v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~----~--~~~~v~~~~~~g~l~ 252 (376)
T 3q7m_A 182 SAPTTA--FGA-AVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPV----V--VNGVVFALAYNGNLT 252 (376)
T ss_dssp CCCEEE--TTE-EEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCE----E--ETTEEEEECTTSCEE
T ss_pred CCcEEE--CCE-EEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcE----E--ECCEEEEEecCcEEE
Confidence 111111 233 45567789999999999998877755432111000000 000011 1 246777788899999
Q ss_pred EEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeec-ccccEEEEEEcCCCCeEEEEe
Q 021247 184 VFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSG-HASWVLSVDASPDGAAITTGS 262 (315)
Q Consensus 184 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~s~~ 262 (315)
.+|..+++.+-.... .....+... +..++.++.++.+..+|.++++.+-.... ....+..... .+..|+.++
T Consensus 253 ~~d~~tG~~~w~~~~--~~~~~~~~~---~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~ 325 (376)
T 3q7m_A 253 ALDLRSGQIMWKREL--GSVNDFIVD---GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGD 325 (376)
T ss_dssp EEETTTCCEEEEECC--CCEEEEEEE---TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEEC
T ss_pred EEECCCCcEEeeccC--CCCCCceEE---CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEe
Confidence 999998887655432 223333332 34677778889999999998876654431 1111222222 245788889
Q ss_pred CCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEee
Q 021247 263 SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313 (315)
Q Consensus 263 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 313 (315)
.+|.+.++|..+++.+.........+.+.-.. .+..|+.++.+|.|..|+
T Consensus 326 ~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~-~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 326 SEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA-ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TTSEEEEEETTTCCEEEEEECCTTCBCSCCEE-ETTEEEEEBTTSCEEEEE
T ss_pred CCCeEEEEECCCCcEEEEEecCCCcceeCCEE-ECCEEEEEeCCCEEEEEe
Confidence 99999999999988765554322333221111 256889999999999987
No 231
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.36 E-value=7e-10 Score=101.35 Aligned_cols=264 Identities=13% Similarity=0.171 Sum_probs=162.6
Q ss_pred cEEEEeeCCCcEEEEcCCCCcceeeccc--cccceEEEEeCC---CCCEEEEee-----CCCeEEEEECCCCceeEEeeC
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLERTNTG--HCLGVVSVAAHP---SGIIAASAS-----LDSFVRVFDVDTNASIATLEA 100 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~~~~~~--h~~~v~~~~~~~---~g~~l~s~~-----~d~~i~~w~~~~~~~~~~~~~ 100 (315)
..++.++.|+.|..+|..+++....... +......+...| ++.+++..+ .++.|+.||..+++.+..+..
T Consensus 122 g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 201 (689)
T 1yiq_A 122 GKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYT 201 (689)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecc
Confidence 4688899999999999998887654432 111111111122 455554332 378999999999998877653
Q ss_pred Cc------------------------------ccE-EEEEECCCCCeEEEEecCCC-------------------eEEEE
Q 021247 101 SP------------------------------SEV-WQMQFDPKGTTLAVAGGGSA-------------------SVKLW 130 (315)
Q Consensus 101 ~~------------------------------~~v-~~~~~~~~~~~~~~~~~~d~-------------------~i~~~ 130 (315)
.+ ..+ ..++++|+...++ .+..++ .|..+
T Consensus 202 ~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy-~~~~~g~~w~~~~~~~~~gd~~y~~~v~Al 280 (689)
T 1yiq_A 202 VPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLY-IGVGNGSLWDPKWRSQAKGDNLFLSSIVAV 280 (689)
T ss_dssp SCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEE-EECCCEESSCHHHHHTTCSCCTTTTEEEEE
T ss_pred cCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEE-EeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 11 011 1467888777654 455554 49999
Q ss_pred ecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCC---EEEEecCCCcEEEEEcccceeeeeecCCc-------
Q 021247 131 DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGR---RIACGSMDGTISVFDVTRAKFLHHLEGHF------- 200 (315)
Q Consensus 131 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~l~~~s~dg~i~i~d~~~~~~~~~~~~~~------- 200 (315)
|.++++.+..+........ ...............+|+ .++.++.+|.++++|..+++.+....-..
T Consensus 281 D~~TG~~~W~~~~~~~d~w----d~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~ 356 (689)
T 1yiq_A 281 NADTGEYVWHYQTTPGDAW----DYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGM 356 (689)
T ss_dssp ETTTCCEEEEEESSTTCCS----CCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EccCCceeEeeecCCcccc----cccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccccccc
Confidence 9999999887754321100 000011111112222554 78889999999999999998763221100
Q ss_pred ---------------------c-----------ceEEEEEcCCCCcEEEEEeC---------------------------
Q 021247 201 ---------------------M-----------PVRSLVYSPVDPRVLFSASD--------------------------- 221 (315)
Q Consensus 201 ---------------------~-----------~v~~~~~~~~~~~~l~s~~~--------------------------- 221 (315)
. .-..++|+|..+ +++....
T Consensus 357 ~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 435 (689)
T 1yiq_A 357 DMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTG-LVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLR 435 (689)
T ss_dssp ETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTT-EEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSE
T ss_pred CccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCC-EEEEeccccceeeeeccccccccccccccccCcc
Confidence 0 001256777433 4443311
Q ss_pred ------------------CCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccc
Q 021247 222 ------------------DTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN 283 (315)
Q Consensus 222 ------------------d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 283 (315)
++.|..||+++++.+-....+.. ...-.+...+.+++.|+.|+.++.||.++++.+-++..
T Consensus 436 ~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~ 514 (689)
T 1yiq_A 436 TGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI-FNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPA 514 (689)
T ss_dssp ECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS-CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC-ccCccceECCCEEEEECCCCcEEEEECCCCccceeeeC
Confidence 37899999999987766554432 22234555677899999999999999999998766544
Q ss_pred ccc-ceEEEEEeeCCCEEE
Q 021247 284 HTD-QVWGVSFRPLGGRVV 301 (315)
Q Consensus 284 ~~~-~v~~~~~s~~~~~l~ 301 (315)
..+ ...-+.|..+|+..+
T Consensus 515 ~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 515 ASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp SSCCCSCCEEEEETTEEEE
T ss_pred CCCcccCceEEEECCEEEE
Confidence 322 223467888887544
No 232
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.34 E-value=4.7e-11 Score=100.26 Aligned_cols=250 Identities=11% Similarity=0.013 Sum_probs=158.3
Q ss_pred EEEEeecCCCCCcEEEEee----------CCCcEEEEcCCCCcceeecccc-------ccceEEEEeCCCCCEEEEeeC-
Q 021247 19 AVTWVPATETRPALLLTGS----------LDETVKLWRPDDMQLERTNTGH-------CLGVVSVAAHPSGIIAASASL- 80 (315)
Q Consensus 19 ~v~~~~~~~~~~~~l~sgs----------~d~~v~~w~~~~~~~~~~~~~h-------~~~v~~~~~~~~g~~l~s~~~- 80 (315)
++.++|++.. ++.+. .++.|.+||..+.+....+.-. ......+.++|+|++++.+..
T Consensus 69 ~i~~spDg~~----lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~ 144 (368)
T 1mda_H 69 LAVAGHSGSD----FALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFG 144 (368)
T ss_dssp EEEECTTSSC----EEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECS
T ss_pred ceEECCCCCE----EEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccC
Confidence 7899998763 55554 4789999999999887776422 123567899999998887754
Q ss_pred -CCeEEE--EECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCC-----cceeeeecCCCCCCCCCC
Q 021247 81 -DSFVRV--FDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAT-----WNLIATLSIPRPEGLKPT 152 (315)
Q Consensus 81 -d~~i~~--w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~-----~~~~~~~~~~~~~~~~~~ 152 (315)
+..+.+ +|..+ +..+..... ....|+++..+++.+.|+.+.+.|+.+ ++...... . ..
T Consensus 145 ~~~~v~V~~iD~~t---v~~i~v~~~----~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t---~--~i-- 210 (368)
T 1mda_H 145 SSAAAGLSVPGASD---DQLTKSASC----FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCT---G--AQ-- 210 (368)
T ss_dssp SSCEEEEEETTTEE---EEEEECSSC----CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSC---T--TS--
T ss_pred CCCeEEEEEEchhh---ceEEECCCc----eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEee---e--ee--
Confidence 467888 88876 444432211 123455555556667788888888875 33221100 0 00
Q ss_pred ccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccc--eeeeeecCC----------ccceEEEEEcCCCCcEEEEEe
Q 021247 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRA--KFLHHLEGH----------FMPVRSLVYSPVDPRVLFSAS 220 (315)
Q Consensus 153 ~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~--~~~~~~~~~----------~~~v~~~~~~~~~~~~l~s~~ 220 (315)
.....+. . .+++..++..+. +.+.+.|+... +.+..+... ......+.++|++.+++++..
T Consensus 211 --~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~ 283 (368)
T 1mda_H 211 --NCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTV 283 (368)
T ss_dssp --CBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEE
T ss_pred --eCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEec
Confidence 0011122 3 455555555555 89999998643 222222110 011112678886666555544
Q ss_pred ---C-----CCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCC-eEEEEe-CCCcEEEEecCccceehcccccccceEE
Q 021247 221 ---D-----DTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGA-AITTGS-SDRTVKLWDLNMRAAMQSMTNHTDQVWG 290 (315)
Q Consensus 221 ---~-----d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~~v~~ 290 (315)
. +..+.++|..+.+.+..+.... ....++++|+++ .+++.. .++.|.++|+.+++.++++... +..+.
T Consensus 284 ~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg-~~P~~ 361 (368)
T 1mda_H 284 EHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELD-KGPES 361 (368)
T ss_dssp ECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCC-SCCCE
T ss_pred cccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECC-CCCCE
Confidence 2 2356699999998887765433 578899999997 566666 5999999999999998888654 34556
Q ss_pred EEEee
Q 021247 291 VSFRP 295 (315)
Q Consensus 291 ~~~s~ 295 (315)
+++.+
T Consensus 362 i~~~~ 366 (368)
T 1mda_H 362 LSVQN 366 (368)
T ss_dssp EECCC
T ss_pred EEeec
Confidence 66654
No 233
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.32 E-value=4.3e-09 Score=89.20 Aligned_cols=264 Identities=10% Similarity=0.025 Sum_probs=159.7
Q ss_pred cEEEEeeCCCcEEEEcCCCCcceeecccc---------ccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCC
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLERTNTGH---------CLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAS 101 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~~~~~~h---------~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~ 101 (315)
..++.++.++.|..+|.++++........ ...+..... .++..++.++.++.|..+|..+++.+......
T Consensus 54 ~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~ 132 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVT-VSGGHVYIGSEKAQVYALNTSDGTVAWQTKVA 132 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEE-EETTEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred CEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCce-EeCCEEEEEcCCCEEEEEECCCCCEEEEEeCC
Confidence 46888888999999999888776443321 112222211 23456667888999999999999887766543
Q ss_pred cccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCc
Q 021247 102 PSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGT 181 (315)
Q Consensus 102 ~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~ 181 (315)
.......... +.. ++.+..++.+..+|.++++.+.......+... ..... .... .+..++.++.++.
T Consensus 133 ~~~~~~p~~~--~~~-v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~----~~~~~----~~~~--~~~~v~~g~~~g~ 199 (376)
T 3q7m_A 133 GEALSRPVVS--DGL-VLIHTSNGQLQALNEADGAVKWTVNLDMPSLS----LRGES----APTT--AFGAAVVGGDNGR 199 (376)
T ss_dssp SCCCSCCEEE--TTE-EEEECTTSEEEEEETTTCCEEEEEECCC---------CCCC----CCEE--ETTEEEECCTTTE
T ss_pred CceEcCCEEE--CCE-EEEEcCCCeEEEEECCCCcEEEEEeCCCCcee----ecCCC----CcEE--ECCEEEEEcCCCE
Confidence 2211111111 233 34567789999999999998877754322100 00000 1111 1456778888999
Q ss_pred EEEEEcccceeeeeecCCccc----eE---EEEEcCC-CCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcC
Q 021247 182 ISVFDVTRAKFLHHLEGHFMP----VR---SLVYSPV-DPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASP 253 (315)
Q Consensus 182 i~i~d~~~~~~~~~~~~~~~~----v~---~~~~~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~ 253 (315)
+..+|..+++.+-........ +. .+.-.|. .+..++.++.++.+..+|.++++.+-.... .....+..
T Consensus 200 l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~-- 275 (376)
T 3q7m_A 200 VSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV-- 275 (376)
T ss_dssp EEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--
T ss_pred EEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--
Confidence 999999988876544321100 00 0001110 234677777889999999988876644332 22334433
Q ss_pred CCCeEEEEeCCCcEEEEecCccceehccc-ccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 254 DGAAITTGSSDRTVKLWDLNMRAAMQSMT-NHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 254 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
++..+..++.++.+..+|..+++.+-... .....+.+... .+..|+.++.+|.+.++|.
T Consensus 276 ~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~ 335 (376)
T 3q7m_A 276 DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINV 335 (376)
T ss_dssp ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEET
T ss_pred ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEEC
Confidence 35577888889999999999887653332 11122222222 2568888888999988874
No 234
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.30 E-value=1.3e-12 Score=110.57 Aligned_cols=204 Identities=14% Similarity=0.107 Sum_probs=110.4
Q ss_pred CCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCC
Q 021247 71 SGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150 (315)
Q Consensus 71 ~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~ 150 (315)
++..+++++.|+.|+.||..+++.+..+.. .++.+..+.+++. ++++++.|+.|..||..+++.+..+..+.+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~-- 82 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL-- 82 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----C-CEEECTTTCCEEEC-----CCSEECSCCHHHH--
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCC-EEEEeCCCCEEEEEECCCCceeeeeeccCccc--
Confidence 567888899999999999999998887765 3343333444554 44566789999999998887766553221100
Q ss_pred CCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeC
Q 021247 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA 230 (315)
Q Consensus 151 ~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~ 230 (315)
. ...++ + ..+..+++++.++.++.||..+++.+..+..+. ...++| .+..+++++.|+.|+.||.
T Consensus 83 ----~-~~sp~----~-~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p-~~~~v~~~~~dg~v~a~d~ 147 (369)
T 2hz6_A 83 ----V-QASPC----R-SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSP-STSLLYLGRTEYTITMYDT 147 (369)
T ss_dssp ----H-TTCSC----C------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCS
T ss_pred ----c-ccCce----E-ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccc-cCCEEEEEecCCEEEEEEC
Confidence 0 00000 1 134567788889999999999998876665443 134456 5667888899999999999
Q ss_pred CCCeeEEEeecccccEEEEEEcCCC---CeEEEEeCCCcEEEEecCccceehcccccccceEE-EEEeeCC
Q 021247 231 EGKSLVTAMSGHASWVLSVDASPDG---AAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWG-VSFRPLG 297 (315)
Q Consensus 231 ~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~-~~~s~~~ 297 (315)
++++.+-....+. .....++++. ..+++++.||.|+.||.++++.+-.... ..++.. ..++++|
T Consensus 148 ~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~pv~~~~~~~~dg 215 (369)
T 2hz6_A 148 KTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY-ASPVVAFYVWQREG 215 (369)
T ss_dssp SSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC-SSCEEEEEECTTSS
T ss_pred CCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC-CCceEEEEEecCCc
Confidence 8876543332111 1122233321 4577789999999999998876544432 234332 3444454
No 235
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.29 E-value=3e-09 Score=84.73 Aligned_cols=195 Identities=12% Similarity=0.029 Sum_probs=141.6
Q ss_pred ceEEEEeCCCCCEEEEeeC--CCeEEEEECCCCceeEEeeCCcc-cEEEEEECCCCCeEEEEecCCCeEEEEecCCccee
Q 021247 62 GVVSVAAHPSGIIAASASL--DSFVRVFDVDTNASIATLEASPS-EVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLI 138 (315)
Q Consensus 62 ~v~~~~~~~~g~~l~s~~~--d~~i~~w~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 138 (315)
....+.+++++.++++.+. ++.|+++|+.+++.+..+..... ....+++. +..++++...++.+.++|..+.+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 3578889998877776654 68999999999998887764332 23345554 5567777788999999999999998
Q ss_pred eeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCCc--c---ceEEEEEcCCCC
Q 021247 139 ATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHF--M---PVRSLVYSPVDP 213 (315)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~--~---~v~~~~~~~~~~ 213 (315)
.++....++ ...++++|+.++++..++.|.++|..+.+....+.-.. . ..+.+.|. ++
T Consensus 100 ~~i~~g~~~---------------g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg 162 (266)
T 2iwa_A 100 KNFTHQMKD---------------GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NG 162 (266)
T ss_dssp EEEECCSSS---------------CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TT
T ss_pred EEEECCCCC---------------eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CC
Confidence 887643111 12244577777766678899999999988777665321 1 25677776 45
Q ss_pred cEEEEEeCCCeEEEEeCCCCeeEEEeecc-------------cccEEEEEEcCCCC-eEEEEeCCCcEEEEecCcc
Q 021247 214 RVLFSASDDTHVHMYDAEGKSLVTAMSGH-------------ASWVLSVDASPDGA-AITTGSSDRTVKLWDLNMR 275 (315)
Q Consensus 214 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~ 275 (315)
++++....++.|.+.|.++++.+..+.-. ....+.++++|+++ +++++...+++.+.++...
T Consensus 163 ~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 163 EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 66666667889999999999988877521 13568999999875 5677778888988888654
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.29 E-value=3.5e-10 Score=99.08 Aligned_cols=220 Identities=13% Similarity=0.119 Sum_probs=146.2
Q ss_pred CCCCEEEEe-eCCCeEEEEECCCCceeEEeeCC-cccEEEEEE-C-CCCCeEEEEe-----------------cCCCeEE
Q 021247 70 PSGIIAASA-SLDSFVRVFDVDTNASIATLEAS-PSEVWQMQF-D-PKGTTLAVAG-----------------GGSASVK 128 (315)
Q Consensus 70 ~~g~~l~s~-~~d~~i~~w~~~~~~~~~~~~~~-~~~v~~~~~-~-~~~~~~~~~~-----------------~~d~~i~ 128 (315)
+||+++... ..+..|.+.|+.+.++...+... ......+++ . |+++++++++ ..++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 477766654 44567999999999887755432 234667787 5 8999887764 3356899
Q ss_pred EEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCC----------------------------
Q 021247 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG---------------------------- 180 (315)
Q Consensus 129 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg---------------------------- 180 (315)
++|..+++....+..... ...++++|+|+++++.+.+.
T Consensus 179 vID~~t~~v~~qI~Vgg~--------------pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~ 244 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSGN--------------LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKA 244 (595)
T ss_dssp EEETTTTEEEEEEEESSC--------------CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHH
T ss_pred EEECCCCeEEEEEEeCCC--------------ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEe
Confidence 999999888887765321 12467788888887766442
Q ss_pred ----------cEEEEEccc--cee-eeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe------------e
Q 021247 181 ----------TISVFDVTR--AKF-LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKS------------L 235 (315)
Q Consensus 181 ----------~i~i~d~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~------------~ 235 (315)
.|.+.|.++ ++. +..+... ....++.++|++..+++++..+.+|.++|..+.+ .
T Consensus 245 v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v 323 (595)
T 1fwx_A 245 IAAGDYQELNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAV 323 (595)
T ss_dssp HHHTCSEEETTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGE
T ss_pred ccCCCeeEECcEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccce
Confidence 356666655 332 2223211 1345788999666666777788999999988542 2
Q ss_pred EEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCc----------cceehcccccccce-----EEEEEeeCCCEE
Q 021247 236 VTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM----------RAAMQSMTNHTDQV-----WGVSFRPLGGRV 300 (315)
Q Consensus 236 ~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~----------~~~~~~~~~~~~~v-----~~~~~s~~~~~l 300 (315)
..... -......++|+|+|...++.-.|+.|.+||++. ...+..+.-|..+- .++.++|||++|
T Consensus 324 ~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l 402 (595)
T 1fwx_A 324 VAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWL 402 (595)
T ss_dssp EECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEE
T ss_pred EEEcC-CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEE
Confidence 33332 234578999999995556778899999999976 23344444443321 223568999999
Q ss_pred EEEeC
Q 021247 301 VSVSD 305 (315)
Q Consensus 301 ~s~~~ 305 (315)
++...
T Consensus 403 ~~~Nk 407 (595)
T 1fwx_A 403 VCLSK 407 (595)
T ss_dssp EEEES
T ss_pred EEcCC
Confidence 87654
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.26 E-value=1.8e-10 Score=95.74 Aligned_cols=251 Identities=12% Similarity=0.002 Sum_probs=149.2
Q ss_pred cEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEE
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQF 110 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~ 110 (315)
..+..++.++.|..|| .+.+.......+...+.++...++|.+.+ ++.+ +..+|. +++.+..+...........+
T Consensus 31 g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~ 105 (330)
T 3hxj_A 31 GTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYF-GSDK--VYAINP-DGTEKWRFDTKKAIVSDFTI 105 (330)
T ss_dssp SCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECC-SSCE--EEEECC-CGGGGGGSCC-----CCEEE
T ss_pred CeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEE-ecCc--EEEECC-CCcEEEEEECCCCcccCceE
Confidence 3588888899999999 67766555444445567777777776555 4333 888886 44433322222211112222
Q ss_pred CCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccc
Q 021247 111 DPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRA 190 (315)
Q Consensus 111 ~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~ 190 (315)
. +..+ ..+..++.+..+|.. ++.......+.. .+.++...+++. +..++.++.+..+|.. +
T Consensus 106 ~--~~~l-~v~t~~~~l~~~d~~-g~~~~~~~~~~~-------------~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g 166 (330)
T 3hxj_A 106 F--EDIL-YVTSMDGHLYAINTD-GTEKWRFKTKKA-------------IYATPIVSEDGT-IYVGSNDNYLYAINPD-G 166 (330)
T ss_dssp E--TTEE-EEECTTSEEEEECTT-SCEEEEEECSSC-------------CCSCCEECTTSC-EEEECTTSEEEEECTT-S
T ss_pred E--CCEE-EEEecCCEEEEEcCC-CCEEEEEcCCCc-------------eeeeeEEcCCCE-EEEEcCCCEEEEECCC-C
Confidence 2 3334 446678899999988 666555433211 133455566665 6667788999999988 6
Q ss_pred eeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEE
Q 021247 191 KFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270 (315)
Q Consensus 191 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iw 270 (315)
+...........+.++...+ ++.+++ ++ +.|..+| .+++.+.........+.++..++++. |..++.++.+..+
T Consensus 167 ~~~~~~~~~~~~~~~~~~d~-~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~ 240 (330)
T 3hxj_A 167 TEKWRFKTNDAITSAASIGK-DGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAI 240 (330)
T ss_dssp CEEEEEECSSCCCSCCEECT-TCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEE
T ss_pred CEeEEEecCCCceeeeEEcC-CCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEE
Confidence 66555544444555555554 444444 44 7899999 55555544444445577778888775 5556777888888
Q ss_pred ecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEee
Q 021247 271 DLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313 (315)
Q Consensus 271 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 313 (315)
+.. ++.+..+......+.++.+.+++ .|..++.+|.|..+|
T Consensus 241 ~~~-g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 241 NPD-GTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAIN 281 (330)
T ss_dssp CTT-SCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEEC
T ss_pred CCC-CCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEEC
Confidence 753 44333333333333344454444 566667777777665
No 238
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.25 E-value=1.8e-08 Score=80.21 Aligned_cols=202 Identities=8% Similarity=0.002 Sum_probs=136.8
Q ss_pred eeEEeeCCcc-cEEEEEECCCCCeEEEEecC--CCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCC
Q 021247 94 SIATLEASPS-EVWQMQFDPKGTTLAVAGGG--SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDG 170 (315)
Q Consensus 94 ~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 170 (315)
.+.++..... ....+.|+|++ .++++.+. ++.|.++|+.+++.+..+.++.. .+...+++. +
T Consensus 11 vv~~~p~~~~~f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~------------~fgeGi~~~--g 75 (266)
T 2iwa_A 11 VLNEFPHDPYAFTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDS------------YFGEGLTLL--N 75 (266)
T ss_dssp EEEEEECCTTCCEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTT------------CCEEEEEEE--T
T ss_pred EEEEEECCCCCCcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCC------------cceEEEEEe--C
Confidence 3455554332 36789999985 56665543 68999999999999888765321 112345554 4
Q ss_pred CEE-EEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeeccc-----c
Q 021247 171 RRI-ACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHA-----S 244 (315)
Q Consensus 171 ~~l-~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~-----~ 244 (315)
+.| ++.-.++.+.++|..+.+.+..+......- ..+++++.+++++ ..++.|.++|.++.+.+..+.-.. .
T Consensus 76 ~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g--~glt~Dg~~l~vs-~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~ 152 (266)
T 2iwa_A 76 EKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDG--WGLATDGKILYGS-DGTSILYEIDPHTFKLIKKHNVKYNGHRVI 152 (266)
T ss_dssp TEEEEEETTCSEEEEEETTTTEEEEEEECCSSSC--CEEEECSSSEEEE-CSSSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred CEEEEEEecCCEEEEEECCCCcEEEEEECCCCCe--EEEEECCCEEEEE-CCCCeEEEEECCCCcEEEEEEECCCCcccc
Confidence 444 555678899999999998888775321111 2244545555555 468899999999988777654211 2
Q ss_pred cEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehccccc-------------ccceEEEEEeeCCCEE-EEEeCCCcEE
Q 021247 245 WVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNH-------------TDQVWGVSFRPLGGRV-VSVSDDKSIS 310 (315)
Q Consensus 245 ~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-------------~~~v~~~~~s~~~~~l-~s~~~d~~i~ 310 (315)
.++.+.+. ++++.+....++.|.+.|..+++.+.++.-. .....+++|+|+++.+ +++....++.
T Consensus 153 ~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~ 231 (266)
T 2iwa_A 153 RLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLF 231 (266)
T ss_dssp CEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEE
T ss_pred cceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEE
Confidence 36788888 6766666666889999999998877665421 1356899999998866 5666677777
Q ss_pred Eeec
Q 021247 311 LYEY 314 (315)
Q Consensus 311 i~~~ 314 (315)
..++
T Consensus 232 ~i~l 235 (266)
T 2iwa_A 232 EIKL 235 (266)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 239
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.25 E-value=6.8e-08 Score=77.71 Aligned_cols=217 Identities=9% Similarity=0.056 Sum_probs=134.9
Q ss_pred CeEEEEECCCCcee-----EEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCC
Q 021247 82 SFVRVFDVDTNASI-----ATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSS 156 (315)
Q Consensus 82 ~~i~~w~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (315)
+.|+.++++..... ..+.........++++|.+..++++....+.|..+|............
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~------------- 76 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQ------------- 76 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECT-------------
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEEC-------------
Confidence 47888888765321 112212235678999998888888887889999999876433222110
Q ss_pred CCcceEEEEECCCCCE-EEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeC--CCeEEEEeCCCC
Q 021247 157 SKKFVLSVAWSPDGRR-IACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASD--DTHVHMYDAEGK 233 (315)
Q Consensus 157 ~~~~i~~~~~~~~~~~-l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~--d~~i~~wd~~~~ 233 (315)
.......+++++++.. +++....+.|.++++..................++++|.++.++++... .+.|..++....
T Consensus 77 ~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~ 156 (267)
T 1npe_A 77 DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT 156 (267)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence 0123678999997554 4556677899999986432222222222456899999866666666544 478888887654
Q ss_pred eeEEEeecccccEEEEEEcCCCCeE-EEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEE-EEeCCCcEEE
Q 021247 234 SLVTAMSGHASWVLSVDASPDGAAI-TTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV-SVSDDKSISL 311 (315)
Q Consensus 234 ~~~~~~~~~~~~i~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~d~~i~i 311 (315)
...............++++|++..| ++-...+.|.+++............ .....+++. ++..|. +-...+.|.+
T Consensus 157 ~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~--d~~~lyva~~~~~~v~~ 233 (267)
T 1npe_A 157 NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTS--YGKNLYYTDWKTNSVIA 233 (267)
T ss_dssp CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEE--ETTEEEEEETTTTEEEE
T ss_pred CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEE--eCCEEEEEECCCCeEEE
Confidence 3322222334567899999976655 5555668899999975443322222 234456665 345554 4445578888
Q ss_pred eec
Q 021247 312 YEY 314 (315)
Q Consensus 312 ~~~ 314 (315)
++.
T Consensus 234 ~d~ 236 (267)
T 1npe_A 234 MDL 236 (267)
T ss_dssp EET
T ss_pred EeC
Confidence 775
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.25 E-value=1.6e-09 Score=89.94 Aligned_cols=250 Identities=12% Similarity=0.027 Sum_probs=152.4
Q ss_pred EEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEEC
Q 021247 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFD 111 (315)
Q Consensus 32 ~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~ 111 (315)
.++.++.+ |..+|. +.+................+. +..+..++.++.+..+|.. ++...........+..+...
T Consensus 72 ~l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~ 145 (330)
T 3hxj_A 72 TIYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVS 145 (330)
T ss_dssp EECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEEC
T ss_pred cEEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEc
Confidence 46666655 888886 444433332222111122222 4455667788999999988 66666655544445555666
Q ss_pred CCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccce
Q 021247 112 PKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK 191 (315)
Q Consensus 112 ~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~ 191 (315)
+++. + ..+..++.+..+|.. ++....+..+.. .+.++...+++...+ ++ +.+..+| .+++
T Consensus 146 ~~g~-l-~vgt~~~~l~~~d~~-g~~~~~~~~~~~-------------~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~ 205 (330)
T 3hxj_A 146 EDGT-I-YVGSNDNYLYAINPD-GTEKWRFKTNDA-------------ITSAASIGKDGTIYF-GS--DKVYAIN-PDGT 205 (330)
T ss_dssp TTSC-E-EEECTTSEEEEECTT-SCEEEEEECSSC-------------CCSCCEECTTCCEEE-ES--SSEEEEC-TTSC
T ss_pred CCCE-E-EEEcCCCEEEEECCC-CCEeEEEecCCC-------------ceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCc
Confidence 6666 3 345677899999988 676665543211 244566666776544 44 8899999 6666
Q ss_pred eeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEe
Q 021247 192 FLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWD 271 (315)
Q Consensus 192 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd 271 (315)
...........+.++...+ ++ .+..++.++.|..+|..+. .+.........+..+.+.+++. |..++.++.|..+|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~-~g-~l~v~t~~~gl~~~~~~g~-~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 206 EKWNFYAGYWTVTRPAISE-DG-TIYVTSLDGHLYAINPDGT-EKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAIN 281 (330)
T ss_dssp EEEEECCSSCCCSCCEECT-TS-CEEEEETTTEEEEECTTSC-EEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEEC
T ss_pred EEEEEccCCcceeceEECC-CC-eEEEEcCCCeEEEECCCCC-EeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEEC
Confidence 6555554445566666665 33 4666777888888886444 3333333333333455565654 66778888899999
Q ss_pred cCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEee
Q 021247 272 LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313 (315)
Q Consensus 272 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 313 (315)
. .++.+.........+.++...++|. |..++.+|.+++..
T Consensus 282 ~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~ 321 (330)
T 3hxj_A 282 P-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALF 321 (330)
T ss_dssp T-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEE
T ss_pred C-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEe
Confidence 6 4555444443444566667767765 67788999998765
No 241
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.23 E-value=7.8e-09 Score=87.64 Aligned_cols=222 Identities=14% Similarity=0.132 Sum_probs=144.5
Q ss_pred CCCcEEEEeeCCCcEEEEcCCCC----cceeecc------cc-ccceEEEEeCCCCCEEEEeeCC------CeEEEEECC
Q 021247 28 TRPALLLTGSLDETVKLWRPDDM----QLERTNT------GH-CLGVVSVAAHPSGIIAASASLD------SFVRVFDVD 90 (315)
Q Consensus 28 ~~~~~l~sgs~d~~v~~w~~~~~----~~~~~~~------~h-~~~v~~~~~~~~g~~l~s~~~d------~~i~~w~~~ 90 (315)
+++-++++|-.++.|.++|..+. ++.+.+. .. ......+...|+| +++++..+ +.+.+.|..
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTT
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECC
Confidence 34457788888999999997643 4444441 00 1134567788999 66665554 789999999
Q ss_pred CCceeEEeeCCccc---EEEEEECCCCCeEEEEec-------------------CCCeEEEEecCCcceeeeecCCCCCC
Q 021247 91 TNASIATLEASPSE---VWQMQFDPKGTTLAVAGG-------------------GSASVKLWDTATWNLIATLSIPRPEG 148 (315)
Q Consensus 91 ~~~~~~~~~~~~~~---v~~~~~~~~~~~~~~~~~-------------------~d~~i~~~d~~~~~~~~~~~~~~~~~ 148 (315)
+.+.+.++.....+ -..+-|+|+++.++ +.. ...+|.+||+.+.+.+.++.+...
T Consensus 173 T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mv-sS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~-- 249 (462)
T 2ece_A 173 SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLV-SSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE-- 249 (462)
T ss_dssp TCCEEEECCSBCTTCCCCCCEEEETTTTEEE-ECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT--
T ss_pred CCeEEEEEccCCCCccccceEEECCCCCEEE-EccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC--
Confidence 99988887643222 33567899988554 442 368999999998887777765311
Q ss_pred CCCCccCCCCcceEEEEE--CCCCCEEEEec------CCCcEEEEEcccceee--ee--ecCC----------------c
Q 021247 149 LKPTDKSSSKKFVLSVAW--SPDGRRIACGS------MDGTISVFDVTRAKFL--HH--LEGH----------------F 200 (315)
Q Consensus 149 ~~~~~~~~~~~~i~~~~~--~~~~~~l~~~s------~dg~i~i~d~~~~~~~--~~--~~~~----------------~ 200 (315)
......+.| +|+++++.++. .++.|.+|....++.. +. +... .
T Consensus 250 ---------g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~ 320 (462)
T 2ece_A 250 ---------NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVP 320 (462)
T ss_dssp ---------EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEEC
T ss_pred ---------CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCC
Confidence 112345555 99999887665 5667877655433221 11 1100 1
Q ss_pred cceEEEEEcCCCCcEEEEEeCCCeEEEEeCCC---CeeEEEeeccc--------------ccEEEEEEcCCCCeEEEEe
Q 021247 201 MPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG---KSLVTAMSGHA--------------SWVLSVDASPDGAAITTGS 262 (315)
Q Consensus 201 ~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~---~~~~~~~~~~~--------------~~i~~~~~~~~~~~l~s~~ 262 (315)
.....+.++|++..++++.-..+.|.+||+.. .+++..+.... +....+.++|+|++|+++.
T Consensus 321 ~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 321 PLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 34678899996555556666688999999752 34444443220 1367899999999988877
No 242
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.21 E-value=9.1e-09 Score=81.05 Aligned_cols=181 Identities=8% Similarity=0.070 Sum_probs=130.0
Q ss_pred eEEEEeCCCCCEEEEeeCCC--eEEEEECCCCceeEEeeCCccc-EEEEEECCCCCeEEEEecCCCeEEEEecCCcceee
Q 021247 63 VVSVAAHPSGIIAASASLDS--FVRVFDVDTNASIATLEASPSE-VWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIA 139 (315)
Q Consensus 63 v~~~~~~~~g~~l~s~~~d~--~i~~w~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~ 139 (315)
...|.|+ ++.++.+.+.+| .|+++|+.+++.+..+...... -..+.. .+..+++....++.+.+||..+.+.+.
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~--~g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISD--WKDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEE--eCCEEEEEEeeCCEEEEEECccCcEEE
Confidence 4677787 678888888876 8999999999988887654332 123444 455677777778999999999999998
Q ss_pred eecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCC--c---cceEEEEEcCCCCc
Q 021247 140 TLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGH--F---MPVRSLVYSPVDPR 214 (315)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~--~---~~v~~~~~~~~~~~ 214 (315)
++..+. ++ ..++ ++++.|+.+..++.|.++|..+.+.+..+... . ..++.+.|. +++
T Consensus 122 ti~~~~-eG-------------~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~ 183 (262)
T 3nol_A 122 SFNYDG-EG-------------WGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGE 183 (262)
T ss_dssp EEECSS-CC-------------CCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTE
T ss_pred EEECCC-Cc-------------eEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCE
Confidence 886532 11 1233 56777776666788999999988877765432 1 223456665 566
Q ss_pred EEEEEeCCCeEEEEeCCCCeeEEEeecc------------cccEEEEEEcCCCCeEEEEeCC
Q 021247 215 VLFSASDDTHVHMYDAEGKSLVTAMSGH------------ASWVLSVDASPDGAAITTGSSD 264 (315)
Q Consensus 215 ~l~s~~~d~~i~~wd~~~~~~~~~~~~~------------~~~i~~~~~~~~~~~l~s~~~d 264 (315)
+++..-.+..|.+.|.++++++..+.-. ..-.+.|+++|+++.|...++.
T Consensus 184 lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 184 IFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 6766667889999999999988776531 1346899999988777666654
No 243
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.18 E-value=2e-07 Score=76.67 Aligned_cols=225 Identities=13% Similarity=0.112 Sum_probs=140.2
Q ss_pred ceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecC-C-CeEEEEecCCcceee
Q 021247 62 GVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGG-S-ASVKLWDTATWNLIA 139 (315)
Q Consensus 62 ~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-d-~~i~~~d~~~~~~~~ 139 (315)
....+.++++|.++++-..++.|..||.... ....+. .......++++++++. +++... + ..|..+|..+++...
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l-~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDL-VATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCE-EEEEECTTSCEEEEEECTTSCEEE
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcE-EEEeccCCcceEEEEcCCCCeEEE
Confidence 4678899999998888778899999998754 333333 2356788999999884 444433 2 247777776665443
Q ss_pred eecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccce--eeee--------ecCCccceEEEEEc
Q 021247 140 TLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK--FLHH--------LEGHFMPVRSLVYS 209 (315)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~--~~~~--------~~~~~~~v~~~~~~ 209 (315)
....+. ......++..+++..+++-..++.|+.+|...++ .... ..........+ +
T Consensus 110 ~~~~~~------------~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s 175 (306)
T 2p4o_A 110 LLTLPD------------AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--K 175 (306)
T ss_dssp EEECTT------------CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--E
T ss_pred EEeCCC------------ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--C
Confidence 222211 1123455555555555666668899999986542 2100 00111234455 6
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCC-Cee--EEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccce--ehccccc
Q 021247 210 PVDPRVLFSASDDTHVHMYDAEG-KSL--VTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA--MQSMTNH 284 (315)
Q Consensus 210 ~~~~~~l~s~~~d~~i~~wd~~~-~~~--~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--~~~~~~~ 284 (315)
|++..++++-...+.|..|+... ++. ...+.. ......++++++|++.++....+.|.+++.. ++. +..+...
T Consensus 176 ~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~ 253 (306)
T 2p4o_A 176 RFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQG 253 (306)
T ss_dssp EETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGT
T ss_pred cCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccc
Confidence 65556677777789999999864 321 111111 1235568899999887777778899999976 444 2233333
Q ss_pred ccceEEEEEe---eCCCEEEEEeC
Q 021247 285 TDQVWGVSFR---PLGGRVVSVSD 305 (315)
Q Consensus 285 ~~~v~~~~~s---~~~~~l~s~~~ 305 (315)
...+++++|. |+++.|+.+..
T Consensus 254 ~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 254 VIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp CTTEEEEEECCSTTTTTEEEEEEC
T ss_pred cCCceEEEEecccCCCCEEEEECC
Confidence 3568899999 88887765554
No 244
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.17 E-value=3e-07 Score=76.97 Aligned_cols=227 Identities=7% Similarity=-0.012 Sum_probs=146.1
Q ss_pred CCcEEEEcCCCCcceeeccccccceEEEEeCCC-CCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeE
Q 021247 39 DETVKLWRPDDMQLERTNTGHCLGVVSVAAHPS-GIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTL 117 (315)
Q Consensus 39 d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~-g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 117 (315)
...|+..+++.........+. ..+..+++++. +.++++-...+.|+.+++........+.........+++++.+..+
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~-~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~l 130 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNL-ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKL 130 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSC-SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEE
T ss_pred ccceEEEeCCCCeeEEeecCC-CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeE
Confidence 456777877665544433332 34678899864 5566666677899999988765444443333445678888877778
Q ss_pred EEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCE-EEEecCC-CcEEEEEcccceeeee
Q 021247 118 AVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRR-IACGSMD-GTISVFDVTRAKFLHH 195 (315)
Q Consensus 118 ~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~s~d-g~i~i~d~~~~~~~~~ 195 (315)
+++-...+.|.+.++.......... ........++++|.+.. +++-... +.|..+++........
T Consensus 131 y~~d~~~~~I~~~~~dG~~~~~l~~-------------~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 197 (349)
T 3v64_C 131 YWTDSGTSRIEVANLDGAHRKVLLW-------------QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII 197 (349)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEEC-------------TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEES
T ss_pred EEEcCCCCeEEEEcCCCCceEEEEe-------------CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEE
Confidence 7887778899999886533221111 01123578999986554 4555555 7898888764332222
Q ss_pred ecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCcc
Q 021247 196 LEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMR 275 (315)
Q Consensus 196 ~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 275 (315)
..........++++|.++.++++-...+.|..+|..+................+++. .+.+.++-...+.|..++..++
T Consensus 198 ~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 198 ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp CCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred EECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCC
Confidence 222334568999998777777887788899999987654433333344567788883 5566677777888888885555
Q ss_pred ceehc
Q 021247 276 AAMQS 280 (315)
Q Consensus 276 ~~~~~ 280 (315)
+....
T Consensus 277 ~~~~~ 281 (349)
T 3v64_C 277 KNQEI 281 (349)
T ss_dssp CSCEE
T ss_pred CccEE
Confidence 44333
No 245
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.16 E-value=1.7e-07 Score=79.67 Aligned_cols=229 Identities=8% Similarity=-0.007 Sum_probs=148.4
Q ss_pred CCCcEEEEcCCCCcceeeccccccceEEEEeCCC-CCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCe
Q 021247 38 LDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPS-GIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTT 116 (315)
Q Consensus 38 ~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~-g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 116 (315)
....|+..+++.........+ ...+..+++++. +.++++-...+.|+.+++........+.........+++++.+..
T Consensus 94 ~~~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ 172 (386)
T 3v65_B 94 NRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDK 172 (386)
T ss_dssp CBSCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTE
T ss_pred cCccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCe
Confidence 346788888776554444332 234678899864 556666667789999998876544444333334567888887777
Q ss_pred EEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEE-EEecCC-CcEEEEEcccceeee
Q 021247 117 LAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI-ACGSMD-GTISVFDVTRAKFLH 194 (315)
Q Consensus 117 ~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~s~d-g~i~i~d~~~~~~~~ 194 (315)
++++-...+.|.+.++........+. ........++++|.+..| ++-... +.|..+++.......
T Consensus 173 lY~~d~~~~~I~~~~~dg~~~~~l~~-------------~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 239 (386)
T 3v65_B 173 LYWTDSGTSRIEVANLDGAHRKVLLW-------------QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI 239 (386)
T ss_dssp EEEEETTTTEEEECBTTSCSCEEEEC-------------SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred EEEEcCCCCeEEEEeCCCCceEEeec-------------CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEE
Confidence 87877777888888876432221111 011236789999866554 444444 788888886433222
Q ss_pred eecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCc
Q 021247 195 HLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274 (315)
Q Consensus 195 ~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 274 (315)
...........++++|.+++++++-...+.|..+|..+................+++ ..+.++++....+.|..++..+
T Consensus 240 ~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~ 318 (386)
T 3v65_B 240 IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFT 318 (386)
T ss_dssp EECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTT
T ss_pred EEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCC
Confidence 222333456899999877777888788899999998765443334334456778888 4556677777788898888655
Q ss_pred cceehcc
Q 021247 275 RAAMQSM 281 (315)
Q Consensus 275 ~~~~~~~ 281 (315)
++....+
T Consensus 319 G~~~~~i 325 (386)
T 3v65_B 319 GKNQEII 325 (386)
T ss_dssp CCSCEEE
T ss_pred CcceEEE
Confidence 5544444
No 246
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.14 E-value=2.7e-08 Score=78.32 Aligned_cols=190 Identities=11% Similarity=0.093 Sum_probs=127.6
Q ss_pred eEEeeCCcc-cEEEEEECCCCCeEEEEecCCC--eEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCC
Q 021247 95 IATLEASPS-EVWQMQFDPKGTTLAVAGGGSA--SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGR 171 (315)
Q Consensus 95 ~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 171 (315)
+.++.+... ....+.|+ ++ .++.+.+.++ .|+++|+.+++.+..+.++.. .+-..++.. ++
T Consensus 34 v~~~phd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~------------~FgeGit~~--g~ 97 (262)
T 3nol_A 34 VHSYPHDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQIELGKR------------YFGEGISDW--KD 97 (262)
T ss_dssp EEEEECCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEEEECCTT------------CCEEEEEEE--TT
T ss_pred EEEecCCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEEEecCCc------------cceeEEEEe--CC
Confidence 455544333 35688887 44 5667777665 899999999999988865422 112234443 44
Q ss_pred EE-EEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecc----c-cc
Q 021247 172 RI-ACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGH----A-SW 245 (315)
Q Consensus 172 ~l-~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~----~-~~ 245 (315)
.| ++.-.++.+.+||..+.+.+..+...... ..++ +++..++++ ..++.|.++|.++.+.+..+.-. . ..
T Consensus 98 ~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG-~glt--~dg~~L~~S-dGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~ 173 (262)
T 3nol_A 98 KIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG-WGLT--HNDQYLIMS-DGTPVLRFLDPESLTPVRTITVTAHGEELPE 173 (262)
T ss_dssp EEEEEESSSSEEEEEETTTCCEEEEEECSSCC-CCEE--ECSSCEEEC-CSSSEEEEECTTTCSEEEEEECEETTEECCC
T ss_pred EEEEEEeeCCEEEEEECccCcEEEEEECCCCc-eEEe--cCCCEEEEE-CCCCeEEEEcCCCCeEEEEEEeccCCccccc
Confidence 44 44557889999999999988877643221 2333 334444444 45788999999988877765431 1 34
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEEecCccceehccccc------------ccceEEEEEeeCCCEEEEEeC
Q 021247 246 VLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNH------------TDQVWGVSFRPLGGRVVSVSD 305 (315)
Q Consensus 246 i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~------------~~~v~~~~~s~~~~~l~s~~~ 305 (315)
++.+.+. +|++.+..-.+..|.+.|.++++.+..+... .+-.++++|+|+++.|+..|.
T Consensus 174 lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 174 LNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred cceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 5667776 6776666667889999999998876655321 135689999999888876654
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.14 E-value=2.3e-08 Score=91.15 Aligned_cols=280 Identities=16% Similarity=0.148 Sum_probs=169.7
Q ss_pred cEEEEeeCCCcEEEEcCCCCcceeecccccc----------ce-EEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEee
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCL----------GV-VSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLE 99 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~----------~v-~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~ 99 (315)
..++.++.++.|.-+|..+++.......... .+ ..+.+ .+..++.++.|+.|..+|..+++.+..+.
T Consensus 67 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 144 (668)
T 1kv9_A 67 GVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQQ 144 (668)
T ss_dssp TEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeeec
Confidence 4678888899999999988887655432110 00 01111 24567778889999999999999887765
Q ss_pred CCccc-EEEEEECC--CCCeEEEEecC-----CCeEEEEecCCcceeeeecCCCCCCCCCCc----------cC------
Q 021247 100 ASPSE-VWQMQFDP--KGTTLAVAGGG-----SASVKLWDTATWNLIATLSIPRPEGLKPTD----------KS------ 155 (315)
Q Consensus 100 ~~~~~-v~~~~~~~--~~~~~~~~~~~-----d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~----------~~------ 155 (315)
..... ...+.-.| .+..+++..+. ++.|..+|.++++.+..+............ ..
T Consensus 145 ~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~ 224 (668)
T 1kv9_A 145 TTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWK 224 (668)
T ss_dssp CSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHH
T ss_pred cCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceee
Confidence 42110 00000011 12334443322 589999999999999887642111000000 00
Q ss_pred --CCCcceEEEEECCCCCEEEEecCCC-------------------cEEEEEcccceeeeeecC--Cc-------cceEE
Q 021247 156 --SSKKFVLSVAWSPDGRRIACGSMDG-------------------TISVFDVTRAKFLHHLEG--HF-------MPVRS 205 (315)
Q Consensus 156 --~~~~~i~~~~~~~~~~~l~~~s~dg-------------------~i~i~d~~~~~~~~~~~~--~~-------~~v~~ 205 (315)
........++++|+.+.++.++.++ .|..+|+.+++.+-.... |. .+...
T Consensus 225 ~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~ 304 (668)
T 1kv9_A 225 LGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITL 304 (668)
T ss_dssp HCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEE
T ss_pred eCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEE
Confidence 0001123468888888888887766 399999999987655432 21 22222
Q ss_pred EEEcCCCCc---EEEEEeCCCeEEEEeCCCCeeEEEeeccc-ccE-----------------------------------
Q 021247 206 LVYSPVDPR---VLFSASDDTHVHMYDAEGKSLVTAMSGHA-SWV----------------------------------- 246 (315)
Q Consensus 206 ~~~~~~~~~---~l~s~~~d~~i~~wd~~~~~~~~~~~~~~-~~i----------------------------------- 246 (315)
..+.. +++ .++.++.+|.++++|.++++++....... .+.
T Consensus 305 ~d~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w 383 (668)
T 1kv9_A 305 AELNI-DGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNW 383 (668)
T ss_dssp EEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCS
T ss_pred EEecc-CCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCC
Confidence 22222 332 68899999999999999988774332110 000
Q ss_pred EEEEEcCCCCeEEEE------------------------------------eCCCcEEEEecCccceehcccccccceEE
Q 021247 247 LSVDASPDGAAITTG------------------------------------SSDRTVKLWDLNMRAAMQSMTNHTDQVWG 290 (315)
Q Consensus 247 ~~~~~~~~~~~l~s~------------------------------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~ 290 (315)
..++++|+..++... ..+|.|..||+.+++.+=+...+ ...+.
T Consensus 384 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~ 462 (668)
T 1kv9_A 384 HSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP-THWNG 462 (668)
T ss_dssp SCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES-SSCCC
T ss_pred CcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC-CCCcC
Confidence 015667765554431 13478999999998765433322 33444
Q ss_pred EEEeeCCCEEEEEeCCCcEEEeec
Q 021247 291 VSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 291 ~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
..+...+..|+.++.|+.++.||.
T Consensus 463 ~~~~t~gg~vf~g~~dg~l~a~d~ 486 (668)
T 1kv9_A 463 GTLSTAGNLVFQGTAAGQMHAYSA 486 (668)
T ss_dssp CEEEETTTEEEEECTTSEEEEEET
T ss_pred ceeEeCCCEEEEECCcccchhhhh
Confidence 556677889999999999999985
No 248
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.13 E-value=1.4e-08 Score=79.90 Aligned_cols=178 Identities=8% Similarity=0.057 Sum_probs=127.1
Q ss_pred eEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccE--EEEEECCCCCeEEEEecCCCeEEEEecCCcceeee
Q 021247 63 VVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEV--WQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIAT 140 (315)
Q Consensus 63 v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~ 140 (315)
...|.++ .+.++.+.+.++.|+++|+.+++.+..+ ... .. ..+++ .+..+++....++.+.+||..+.+.+.+
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLG-NIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECT-TCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCC-CcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcEEEE
Confidence 4567776 4678888999999999999999988776 332 32 33555 4456667777889999999999999988
Q ss_pred ecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCC--cc---ceEEEEEcCCCCcE
Q 021247 141 LSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGH--FM---PVRSLVYSPVDPRV 215 (315)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~--~~---~v~~~~~~~~~~~~ 215 (315)
+..+.. + ..++ ++++.|+.+..++.|.++|..+.+.+..+.-. .. .++.+.|. ++++
T Consensus 132 i~~~~e-G-------------wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~l 193 (268)
T 3nok_A 132 TRYSGE-G-------------WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVI 193 (268)
T ss_dssp EECSSC-C-------------CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEE
T ss_pred EeCCCc-e-------------eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEE
Confidence 865321 1 1333 46777777767889999999998887766432 11 34566666 5666
Q ss_pred EEEEeCCCeEEEEeCCCCeeEEEeecc-------------cccEEEEEEcCCCCeEEEEeC
Q 021247 216 LFSASDDTHVHMYDAEGKSLVTAMSGH-------------ASWVLSVDASPDGAAITTGSS 263 (315)
Q Consensus 216 l~s~~~d~~i~~wd~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~~l~s~~~ 263 (315)
++..-.+..|.+.|.++++++..+.-. ..-.+.|+++|+++.|+..++
T Consensus 194 yanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 194 YANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 666667889999999999888776521 135689999997665555444
No 249
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.10 E-value=8.2e-07 Score=74.33 Aligned_cols=233 Identities=10% Similarity=0.032 Sum_probs=145.2
Q ss_pred EEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecC
Q 021247 64 VSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSI 143 (315)
Q Consensus 64 ~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~ 143 (315)
.+....+++.++++- ...|+..++........+. .......++|++.+..++++-...+.|..++.........+..
T Consensus 37 ~C~~~~~~~~ll~~~--~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~ 113 (349)
T 3v64_C 37 SCKALGPEPVLLFAN--RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 113 (349)
T ss_dssp CEEESSSCCEEEEEC--BSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred cccccccCceeEeec--ccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC
Confidence 344555544444433 3458888887654433333 3455789999988888888877788999998876443222211
Q ss_pred CCCCCCCCCccCCCCcceEEEEECCCC-CEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCC
Q 021247 144 PRPEGLKPTDKSSSKKFVLSVAWSPDG-RRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 222 (315)
Q Consensus 144 ~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 222 (315)
.......+++.+.+ +.+++-...+.|.+.++........+.......+.+++.|.++.++++-...
T Consensus 114 -------------~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~ 180 (349)
T 3v64_C 114 -------------GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN 180 (349)
T ss_dssp -------------SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSS
T ss_pred -------------CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCC
Confidence 01124578888754 4556666778999999865433223333345678999998777777777666
Q ss_pred -CeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeE-EEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEE
Q 021247 223 -THVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAI-TTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRV 300 (315)
Q Consensus 223 -~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 300 (315)
+.|..+++.+..............+.++++|++..| ++-...+.|..++++.......+........++++ ..+...
T Consensus 181 ~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly 259 (349)
T 3v64_C 181 TPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLY 259 (349)
T ss_dssp SCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEE
T ss_pred CCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEE
Confidence 889999987654433333345568899999865544 55556678999998743222222222345677777 344444
Q ss_pred EEEeCCCcEEEee
Q 021247 301 VSVSDDKSISLYE 313 (315)
Q Consensus 301 ~s~~~d~~i~i~~ 313 (315)
++-...+.|..++
T Consensus 260 ~td~~~~~V~~~~ 272 (349)
T 3v64_C 260 WTDWHTKSINSAN 272 (349)
T ss_dssp EEETTTTEEEEEE
T ss_pred EecCCCCeEEEEE
Confidence 5555556666654
No 250
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.10 E-value=1.1e-07 Score=74.19 Aligned_cols=182 Identities=12% Similarity=0.050 Sum_probs=127.7
Q ss_pred ceEEEEeCCCCCEEEEeeCC--CeEEEEECCCCceeEEeeCCccc-EEEEEECCCCCeEEEEecCCCeEEEEecCCccee
Q 021247 62 GVVSVAAHPSGIIAASASLD--SFVRVFDVDTNASIATLEASPSE-VWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLI 138 (315)
Q Consensus 62 ~v~~~~~~~~g~~l~s~~~d--~~i~~w~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 138 (315)
....+.|++ +.++.+.+.+ +.|+.+|+.+++.+..+...... -..+.. .+..++.....++.+.+||..+.+.+
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~--~~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVA--WRDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEESSSSEEEEEETTTTEEE
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEE--eCCEEEEEEeeCCEEEEEECCcCcEE
Confidence 456778876 6777777775 48999999999988877654332 123343 35567777778899999999999999
Q ss_pred eeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCCc-----cceEEEEEcCCCC
Q 021247 139 ATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHF-----MPVRSLVYSPVDP 213 (315)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~~ 213 (315)
.++..+.. -..++ ++++.|+.+..++.|.++|..+.+.+..+.-.. ..++.+.+. ++
T Consensus 99 ~ti~~~~~--------------Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~--~G 160 (243)
T 3mbr_X 99 ARFRYPGE--------------GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV--NG 160 (243)
T ss_dssp EEEECSSC--------------CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TT
T ss_pred EEEeCCCC--------------ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--CC
Confidence 88865321 12344 456666666668899999999988777665321 234555655 56
Q ss_pred cEEEEEeCCCeEEEEeCCCCeeEEEeecc-------------cccEEEEEEcCCCCeEEEEeCC
Q 021247 214 RVLFSASDDTHVHMYDAEGKSLVTAMSGH-------------ASWVLSVDASPDGAAITTGSSD 264 (315)
Q Consensus 214 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~~l~s~~~d 264 (315)
++++..-.+..|.+.|.++++++..+.-. ..-.+.|+++|+++.|...++.
T Consensus 161 ~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 161 ELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred EEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 66666667889999999999988776521 1356889999987766655543
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.09 E-value=2.6e-07 Score=76.43 Aligned_cols=238 Identities=11% Similarity=0.065 Sum_probs=144.1
Q ss_pred ceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeC--------------------CcccEEEEEECCCCCeEEEEe
Q 021247 62 GVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEA--------------------SPSEVWQMQFDPKGTTLAVAG 121 (315)
Q Consensus 62 ~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~~~~~~ 121 (315)
....+.++++|.++.++..++.|..|+..++... .+.. .......+++++++..++++.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 4567788999987778888899999988765432 2211 012467899997334455543
Q ss_pred cCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECC-CCCEEEEecC-----------------CCcEE
Q 021247 122 GGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP-DGRRIACGSM-----------------DGTIS 183 (315)
Q Consensus 122 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~s~-----------------dg~i~ 183 (315)
. ...+..+|..+++.. .+... ..+ ........+++.+ +|+..++-.. ++.|.
T Consensus 99 ~-~~~i~~~d~~~g~~~-~~~~~-~~~-------~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~ 168 (322)
T 2fp8_A 99 C-YYHLSVVGSEGGHAT-QLATS-VDG-------VPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLI 168 (322)
T ss_dssp T-TTEEEEECTTCEECE-EEESE-ETT-------EECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEE
T ss_pred C-CCCEEEEeCCCCEEE-Eeccc-CCC-------CcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEE
Confidence 3 345888887654321 11100 000 0112367899999 8886665432 37799
Q ss_pred EEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe--eEEEeecccccEEEEEEcCCCCeEEEE
Q 021247 184 VFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKS--LVTAMSGHASWVLSVDASPDGAAITTG 261 (315)
Q Consensus 184 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~s~ 261 (315)
.+|..+++...... .......++++|++..++++-...+.|.+|+..+.. ....+....+ ...++++++|.+.++.
T Consensus 169 ~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~ 246 (322)
T 2fp8_A 169 KYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSS 246 (322)
T ss_dssp EEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEE
T ss_pred EEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEe
Confidence 99987665432221 122346789998544456666777899999987421 1111111223 7789999999876665
Q ss_pred eC----------CCcEEEEecCccceehccccc----ccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 262 SS----------DRTVKLWDLNMRAAMQSMTNH----TDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 262 ~~----------d~~i~iwd~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
.. .+.|..+|.. ++.+..+... ...+.++++ .++...++....+.|..+++
T Consensus 247 ~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 247 SEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp EEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC
T ss_pred cCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEec
Confidence 44 4667788764 5555444332 234666766 45655566667788988875
No 252
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.08 E-value=2.9e-07 Score=71.85 Aligned_cols=191 Identities=13% Similarity=0.090 Sum_probs=128.4
Q ss_pred eEEeeCCc-ccEEEEEECCCCCeEEEEecCC--CeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCC
Q 021247 95 IATLEASP-SEVWQMQFDPKGTTLAVAGGGS--ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGR 171 (315)
Q Consensus 95 ~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~d--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 171 (315)
+.++.+.+ .....+.|++ ..++.+.+.+ ..|+.+|+.+++.+....++... +-..++... ++
T Consensus 12 ~~~~phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~------------fgeGi~~~~-~~ 76 (243)
T 3mbr_X 12 VKRYPHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY------------FGAGIVAWR-DR 76 (243)
T ss_dssp EEEEECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC------------CEEEEEEET-TE
T ss_pred EEEcCCCCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc------------ceeEEEEeC-CE
Confidence 44554332 3467888986 4566776665 48999999999999888664321 122344432 33
Q ss_pred EEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeeccc-----ccE
Q 021247 172 RIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHA-----SWV 246 (315)
Q Consensus 172 ~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~-----~~i 246 (315)
.....-.++.+.+||..+.+.+..+...... ..++ +++.++++| ..++.|.++|.++.+.+..+.-.. ..+
T Consensus 77 ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G-wglt--~dg~~L~vS-dgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~l 152 (243)
T 3mbr_X 77 LIQLTWRNHEGFVYDLATLTPRARFRYPGEG-WALT--SDDSHLYMS-DGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNL 152 (243)
T ss_dssp EEEEESSSSEEEEEETTTTEEEEEEECSSCC-CEEE--ECSSCEEEE-CSSSEEEEECTTTCCEEEEEECEETTEECCCE
T ss_pred EEEEEeeCCEEEEEECCcCcEEEEEeCCCCc-eEEe--eCCCEEEEE-CCCCeEEEEeCCCCeEEEEEEEccCCcccccc
Confidence 4455567899999999999998887643322 3444 334455555 458899999999988777664321 345
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccc-------------cccceEEEEEeeCCCEEEEEeC
Q 021247 247 LSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN-------------HTDQVWGVSFRPLGGRVVSVSD 305 (315)
Q Consensus 247 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-------------~~~~v~~~~~s~~~~~l~s~~~ 305 (315)
+.+.+. +|++.+..-.+..|.+.|.++++.+..+.. ..+-.++++++|+++.|+..|.
T Consensus 153 NeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 153 NELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred eeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 667766 666666665678999999999887665431 1235789999999888766553
No 253
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.06 E-value=9.7e-06 Score=75.56 Aligned_cols=277 Identities=9% Similarity=0.095 Sum_probs=172.4
Q ss_pred ccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccc-------cccceEEEEeCCCCCEEEEeeCCCeEEE
Q 021247 14 EESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTG-------HCLGVVSVAAHPSGIIAASASLDSFVRV 86 (315)
Q Consensus 14 ~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~-------h~~~v~~~~~~~~g~~l~s~~~d~~i~~ 86 (315)
...|.++...+.+ .+..|..++-+..|+..+.+....... ....|.++...++|.+.+.. .+ .|.+
T Consensus 214 ~~~i~~i~~d~~g-----~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~-Gl~~ 286 (795)
T 4a2l_A 214 TKQIQAILQQSPT-----RIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT-FN-DLNI 286 (795)
T ss_dssp CCCEEEEEEEETT-----EEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE-SS-CEEE
T ss_pred CCeeEEEEEcCCC-----CEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEe-CC-hhhe
Confidence 3456776655433 366666665688898876554332211 23569999999998876644 44 5889
Q ss_pred EECCCCceeEEeeC--------CcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCC
Q 021247 87 FDVDTNASIATLEA--------SPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSK 158 (315)
Q Consensus 87 w~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (315)
|+..++... .+.. ....|.++..+++|... .|..++-|..|+..+.+... +..... ......
T Consensus 287 ~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~D~~g~lW--igt~~~Gl~~~~~~~~~~~~-~~~~~~------~~~l~~ 356 (795)
T 4a2l_A 287 YHEGTDSFA-SYSSNPVENGSLSQRSVRSIFMDSQGGMW--LGTYFGGLNYYHPIRNRFKN-IRNIPY------KNSLSD 356 (795)
T ss_dssp EETTTTEEE-EECCCTTSTTSCSSSCEEEEEECTTSCEE--EEESSSCEEEECGGGGSSEE-ECCCTT------SSSCSC
T ss_pred EcCCCCeEE-EEecCCCCCCCCCCCcEEEEEEeCCcCEE--EEECCCCeEEeCCCcccceE-EcCCCC------CCCCCC
Confidence 998776533 3321 23569999999888744 35566778888876543322 211100 011123
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeec--------CCccceEEEEEcCCCCcEEEEEeCCCeEEEEeC
Q 021247 159 KFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLE--------GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA 230 (315)
Q Consensus 159 ~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~ 230 (315)
..|.++...++|+ |..|+.++.|..||..+++...... .....|.++...+ ++++|..|+.++-|..||.
T Consensus 357 ~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 357 NVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp SSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET-TTTEEEEEETTTEEEEEET
T ss_pred CeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeCcCceeEEeC
Confidence 4588999888775 5557778789999987665433221 1235688888765 4553666777777999998
Q ss_pred CCCeeEEEee----cccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehccc------ccccceEEEEEeeCCCEE
Q 021247 231 EGKSLVTAMS----GHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMT------NHTDQVWGVSFRPLGGRV 300 (315)
Q Consensus 231 ~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l 300 (315)
++++...... .....|.++..++++.+.+ |+.+ -+.+|+..+++...... .....|.++...++|...
T Consensus 435 ~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW 512 (795)
T 4a2l_A 435 NSGQVENFNQRNSQLVNENVYAILPDGEGNLWL-GTLS-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLW 512 (795)
T ss_dssp TTCCEEEECTTTSCCSCSCEEEEEECSSSCEEE-EESS-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEE
T ss_pred CCCcEEEeecCCCCcCCCeeEEEEECCCCCEEE-EecC-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEE
Confidence 8765543321 1245689999888887554 4444 48889987654332211 123578899888888766
Q ss_pred EEEeCCCcEEEee
Q 021247 301 VSVSDDKSISLYE 313 (315)
Q Consensus 301 ~s~~~d~~i~i~~ 313 (315)
+... +-+.+|+
T Consensus 513 igt~--~Gl~~~~ 523 (795)
T 4a2l_A 513 IGGE--EGLSVFK 523 (795)
T ss_dssp EEES--SCEEEEE
T ss_pred EEeC--CceEEEe
Confidence 6554 3465555
No 254
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.06 E-value=6.1e-08 Score=88.31 Aligned_cols=263 Identities=16% Similarity=0.172 Sum_probs=154.1
Q ss_pred cEEEEeeCCCcEEEEcCCCCcceeeccccc-cceEEEEeC---CCCCEEEEee-----CCCeEEEEECCCCceeEEeeCC
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHC-LGVVSVAAH---PSGIIAASAS-----LDSFVRVFDVDTNASIATLEAS 101 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~-~~v~~~~~~---~~g~~l~s~~-----~d~~i~~w~~~~~~~~~~~~~~ 101 (315)
..++.++.|+.|..+|..+++......... .....+... .++.+++..+ .++.|+.+|..+++.+..+...
T Consensus 118 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~ 197 (668)
T 1kv9_A 118 DKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTV 197 (668)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS
T ss_pred CEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEeccc
Confidence 368888999999999999888765543210 000000111 1444444322 2689999999999988776532
Q ss_pred c---c---------------------------c-EEEEEECCCCCeEEEEecCCC-------------------eEEEEe
Q 021247 102 P---S---------------------------E-VWQMQFDPKGTTLAVAGGGSA-------------------SVKLWD 131 (315)
Q Consensus 102 ~---~---------------------------~-v~~~~~~~~~~~~~~~~~~d~-------------------~i~~~d 131 (315)
+ . . ...++++|....+++ +..++ .|..+|
T Consensus 198 ~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~-~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 198 PGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYV-GTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp CCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEE-ECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred CCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEE-eCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 1 0 0 113577777775544 44444 499999
Q ss_pred cCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCC---EEEEecCCCcEEEEEcccceeeeeecCCc--------
Q 021247 132 TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGR---RIACGSMDGTISVFDVTRAKFLHHLEGHF-------- 200 (315)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~l~~~s~dg~i~i~d~~~~~~~~~~~~~~-------- 200 (315)
.++++.+..+........ ............+..+|+ .++.++.+|.++++|..+++.+.......
T Consensus 277 ~~tG~~~W~~~~~~~~~w----d~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d 352 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPGDSW----DFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVD 352 (668)
T ss_dssp TTTCCEEEEEESSTTCCS----CCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEEC
T ss_pred CCCCceeeEeecCCCccc----cccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccc
Confidence 999999888764321100 000001111222223554 68889999999999999998763321110
Q ss_pred ----cce------------------------EEEEEcCCCCcEEEE----------------------------------
Q 021247 201 ----MPV------------------------RSLVYSPVDPRVLFS---------------------------------- 218 (315)
Q Consensus 201 ----~~v------------------------~~~~~~~~~~~~l~s---------------------------------- 218 (315)
.++ ..++++|..+.+++.
T Consensus 353 ~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p 432 (668)
T 1kv9_A 353 LATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVP 432 (668)
T ss_dssp TTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCC
T ss_pred cccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCC
Confidence 000 014566643333221
Q ss_pred -EeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccc-eEEEEEeeC
Q 021247 219 -ASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQ-VWGVSFRPL 296 (315)
Q Consensus 219 -~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~-v~~~~~s~~ 296 (315)
...++.|..||..+++.+=....+. ......+...+.+++.++.|+.++.||.++++.+..+...... ..-+.+..+
T Consensus 433 ~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~ 511 (668)
T 1kv9_A 433 AAVVSGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELA 511 (668)
T ss_dssp GGGCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred CCCccceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEEC
Confidence 1134789999999988765443322 2222234446778889999999999999999887665443211 122345567
Q ss_pred CCE
Q 021247 297 GGR 299 (315)
Q Consensus 297 ~~~ 299 (315)
|+.
T Consensus 512 G~~ 514 (668)
T 1kv9_A 512 GRQ 514 (668)
T ss_dssp TEE
T ss_pred CEE
Confidence 763
No 255
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.04 E-value=1.9e-07 Score=73.53 Aligned_cols=189 Identities=11% Similarity=0.060 Sum_probs=128.0
Q ss_pred eEEeeCCcc-cEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEE
Q 021247 95 IATLEASPS-EVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI 173 (315)
Q Consensus 95 ~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 173 (315)
+.++..... ....+.|+ +..++++.+.++.|+++|+.+++.+..+ ++.. .+-..+++.. ++..
T Consensus 46 v~~~phd~~~ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~------------~FgeGit~~g-~~Ly 109 (268)
T 3nok_A 46 IREYPHATNAFTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RLGN------------IFAEGLASDG-ERLY 109 (268)
T ss_dssp EEEEECCTTCCEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTT------------CCEEEEEECS-SCEE
T ss_pred EEEEcCCCccccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC------------cceeEEEEeC-CEEE
Confidence 444543332 35678886 3578888889999999999999988877 5432 1123455543 2344
Q ss_pred EEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeec--cc---ccEEE
Q 021247 174 ACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSG--HA---SWVLS 248 (315)
Q Consensus 174 ~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~--~~---~~i~~ 248 (315)
.+...++.+.+||..+.+.+..+..... -..++ +++ +.|+.+..++.|.++|.++.+.+..+.- +. ..++.
T Consensus 110 ~ltw~~~~v~V~D~~Tl~~~~ti~~~~e-GwGLt--~Dg-~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNe 185 (268)
T 3nok_A 110 QLTWTEGLLFTWSGMPPQRERTTRYSGE-GWGLC--YWN-GKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINE 185 (268)
T ss_dssp EEESSSCEEEEEETTTTEEEEEEECSSC-CCCEE--EET-TEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred EEEccCCEEEEEECCcCcEEEEEeCCCc-eeEEe--cCC-CEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccc
Confidence 4556789999999999999888764322 23444 334 4455555688999999999887776542 21 24567
Q ss_pred EEEcCCCCeEEEEeCCCcEEEEecCccceehcccc-------------cccceEEEEEeeCCCEEEEEe
Q 021247 249 VDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN-------------HTDQVWGVSFRPLGGRVVSVS 304 (315)
Q Consensus 249 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-------------~~~~v~~~~~s~~~~~l~s~~ 304 (315)
+.+. +|++.+..-.+..|.+.|.++++.+..+.. ..+-.++++++|+++.|+..|
T Consensus 186 Le~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 186 LECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred cEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 7777 676666665788999999999887665432 113578999999877776554
No 256
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.04 E-value=1.3e-06 Score=74.11 Aligned_cols=232 Identities=10% Similarity=0.027 Sum_probs=145.3
Q ss_pred EEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCC
Q 021247 65 SVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIP 144 (315)
Q Consensus 65 ~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~ 144 (315)
+....+.+.++++ ....|+..++........+. .......++|++.+..++++-...+.|..++.........+...
T Consensus 81 C~~~~~~~~l~~~--~~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~ 157 (386)
T 3v65_B 81 CKALGPEPVLLFA--NRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG 157 (386)
T ss_dssp EEECSSCCEEEEE--CBSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSS
T ss_pred ECCccccceeEee--cCccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCC
Confidence 3344443433333 33568888887655433333 34567899999888888888777889999998765432222110
Q ss_pred CCCCCCCCccCCCCcceEEEEECCCC-CEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCC-
Q 021247 145 RPEGLKPTDKSSSKKFVLSVAWSPDG-RRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD- 222 (315)
Q Consensus 145 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d- 222 (315)
......+++.+.+ +.+++-...+.|.+.++........+.......+.+++.|.++.++++-...
T Consensus 158 -------------~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~ 224 (386)
T 3v65_B 158 -------------LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNT 224 (386)
T ss_dssp -------------CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSS
T ss_pred -------------CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCC
Confidence 0113468888754 4556666778899988864433333333345678999998777777776666
Q ss_pred CeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeE-EEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEE
Q 021247 223 THVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAI-TTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301 (315)
Q Consensus 223 ~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 301 (315)
+.|..+++.+..............+.++++|++..| ++-...+.|..++++.......+........++++ ..+..++
T Consensus 225 ~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~ 303 (386)
T 3v65_B 225 PRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYW 303 (386)
T ss_dssp CEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEE
T ss_pred CEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEE
Confidence 889999987654443333445568899999865544 55556778999998643222222222345677888 3444445
Q ss_pred EEeCCCcEEEee
Q 021247 302 SVSDDKSISLYE 313 (315)
Q Consensus 302 s~~~d~~i~i~~ 313 (315)
+-...+.|..++
T Consensus 304 td~~~~~V~~~~ 315 (386)
T 3v65_B 304 TDWHTKSINSAN 315 (386)
T ss_dssp EETTTTEEEEEE
T ss_pred eeCCCCeEEEEE
Confidence 555667777665
No 257
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.03 E-value=4.4e-06 Score=68.86 Aligned_cols=224 Identities=9% Similarity=-0.010 Sum_probs=139.7
Q ss_pred CcEEEEcCCCCcceeeccccccceEEEEeCCCC-CEEEEeeCCCeEEEEECCC----CceeEEeeCCcccEEEEEECCCC
Q 021247 40 ETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSG-IIAASASLDSFVRVFDVDT----NASIATLEASPSEVWQMQFDPKG 114 (315)
Q Consensus 40 ~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g-~~l~s~~~d~~i~~w~~~~----~~~~~~~~~~~~~v~~~~~~~~~ 114 (315)
..|+..+++..+....... -..+..+.+++.+ .++++-...+.|+.+++.. ......+.........+++++.+
T Consensus 10 ~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp SSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred CeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 5688888876655444332 3456788998754 5666666678999999876 22222232222345688888777
Q ss_pred CeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEE-EEecCC-CcEEEEEccccee
Q 021247 115 TTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI-ACGSMD-GTISVFDVTRAKF 192 (315)
Q Consensus 115 ~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~s~d-g~i~i~d~~~~~~ 192 (315)
..++++-...+.|.+.|.........+.. .......++++|.+..| ++.... +.|..+++.....
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-------------~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~ 155 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRKTLFRE-------------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 155 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEEC-------------TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE
T ss_pred CeEEEEECCCCEEEEEeCCCCceEEEEEC-------------CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe
Confidence 77777777788999999865332211110 01236789999865544 444333 6888888753322
Q ss_pred eeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEee--cccccEEEEEEcCCCCeEEEEeCCCcEEEE
Q 021247 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS--GHASWVLSVDASPDGAAITTGSSDRTVKLW 270 (315)
Q Consensus 193 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~s~~~d~~i~iw 270 (315)
.............++++|.+++++++-...+.|..+|..+........ ........+++. .+.++++-...+.|..+
T Consensus 156 ~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~ 234 (316)
T 1ijq_A 156 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSA 234 (316)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred EEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEE
Confidence 212222334578999998777777777788899999987643322222 123456778885 45666777778889988
Q ss_pred ecCcccee
Q 021247 271 DLNMRAAM 278 (315)
Q Consensus 271 d~~~~~~~ 278 (315)
+..+++..
T Consensus 235 ~~~~g~~~ 242 (316)
T 1ijq_A 235 NRLTGSDV 242 (316)
T ss_dssp ETTTCCCC
T ss_pred eCCCCcce
Confidence 87655433
No 258
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.03 E-value=3.1e-08 Score=86.88 Aligned_cols=214 Identities=15% Similarity=0.132 Sum_probs=141.4
Q ss_pred EEEEeeCCCcEEEEcCCCCccee--eccccccceEEEEe-C-CCCCEEEEee------------------CCCeEEEEEC
Q 021247 32 LLLTGSLDETVKLWRPDDMQLER--TNTGHCLGVVSVAA-H-PSGIIAASAS------------------LDSFVRVFDV 89 (315)
Q Consensus 32 ~l~sgs~d~~v~~w~~~~~~~~~--~~~~h~~~v~~~~~-~-~~g~~l~s~~------------------~d~~i~~w~~ 89 (315)
++++...++.|.+.|++++++.+ .++. ...+..+.+ . |++.++++++ .++.+-++|.
T Consensus 104 lfVnd~~~~rVavIdl~t~~~~~ii~ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~ 182 (595)
T 1fwx_A 104 LFMNDKANTRVARVRCDVMKCDAILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDA 182 (595)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEET
T ss_pred EEEEcCCCCEEEEEECCCceEeeEEeCCC-CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEEC
Confidence 45555566789999999998766 3331 234667776 4 8999888874 3457899999
Q ss_pred CCCceeEEeeCCcccEEEEEECCCCCeEEEEecCC--------------CeEEEE-----------------------ec
Q 021247 90 DTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGS--------------ASVKLW-----------------------DT 132 (315)
Q Consensus 90 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d--------------~~i~~~-----------------------d~ 132 (315)
.+.+....+.... ....++.+|+++.+++++... ..|.+. |.
T Consensus 183 ~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~ 261 (595)
T 1fwx_A 183 DKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDG 261 (595)
T ss_dssp TTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEEC
T ss_pred CCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeC
Confidence 9888777766433 345677899999887776443 224444 43
Q ss_pred CC--cce-eeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEe-cCCCcEEEEEcccce------------eeeee
Q 021247 133 AT--WNL-IATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACG-SMDGTISVFDVTRAK------------FLHHL 196 (315)
Q Consensus 133 ~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-s~dg~i~i~d~~~~~------------~~~~~ 196 (315)
++ ++. +..+..+ ....++.++|||++++++ ..+..|.++|+.+.+ ....+
T Consensus 262 ~~~~~~~~~~~Ipvg--------------~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v 327 (595)
T 1fwx_A 262 RKEASSLFTRYIPIA--------------NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP 327 (595)
T ss_dssp SGGGCCSSEEEEEEE--------------SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC
T ss_pred cccCCceeEEEEecC--------------CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc
Confidence 33 111 1122111 113479999999987654 577899999998653 22333
Q ss_pred cCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCC----------CeeEEEeeccccc-----EEEEEEcCCCCeEEEE
Q 021247 197 EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG----------KSLVTAMSGHASW-----VLSVDASPDGAAITTG 261 (315)
Q Consensus 197 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~----------~~~~~~~~~~~~~-----i~~~~~~~~~~~l~s~ 261 (315)
... ...+.++|+|++ ...++...|+.|.+||+.. .+.+..+..|..+ -..+..+|||++|++.
T Consensus 328 ~vG-~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 328 ELG-LGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCL 405 (595)
T ss_dssp BCC-SCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred CCC-CCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEc
Confidence 322 346889999955 7777888899999999865 4566666555332 1233568999999887
Q ss_pred eC
Q 021247 262 SS 263 (315)
Q Consensus 262 ~~ 263 (315)
..
T Consensus 406 Nk 407 (595)
T 1fwx_A 406 SK 407 (595)
T ss_dssp ES
T ss_pred CC
Confidence 55
No 259
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.02 E-value=1.2e-05 Score=74.85 Aligned_cols=277 Identities=11% Similarity=0.122 Sum_probs=171.1
Q ss_pred eEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeec-cccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCcee
Q 021247 17 VWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTN-TGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASI 95 (315)
Q Consensus 17 v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~-~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~ 95 (315)
|.++...+.+ .+..|..++-|..|+..+.+..... ..+...|.++...++|.+.+. +.++.+..||..+++..
T Consensus 175 i~~i~~d~~g-----~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwig-t~~~Gl~~~~~~~~~~~ 248 (795)
T 4a2l_A 175 IASTLYRQGD-----QIYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVA-TEGAGLFLINPKTKEIK 248 (795)
T ss_dssp CEEEEEEETT-----EEEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEE-EBSSCEEEEETTTTEEE
T ss_pred eEEEEECCCC-----CEEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEE-ECCCCeEEEeCCCCeEE
Confidence 7777665543 3666777666888987766543321 123456888888888876654 44444888998776543
Q ss_pred EEeeC-------CcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECC
Q 021247 96 ATLEA-------SPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP 168 (315)
Q Consensus 96 ~~~~~-------~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 168 (315)
..... ....|.++..++++...+ |... -|.+||..+.+.......+.. ........|.++...+
T Consensus 249 ~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi--gt~~-Gl~~~~~~~~~~~~~~~~~~~------~~~l~~~~i~~i~~D~ 319 (795)
T 4a2l_A 249 NYLHSPSNPKSISSNYIRSLAMDSQNRLWI--GTFN-DLNIYHEGTDSFASYSSNPVE------NGSLSQRSVRSIFMDS 319 (795)
T ss_dssp EECCCTTCTTSCSCSBEEEEEECTTSCEEE--EESS-CEEEEETTTTEEEEECCCTTS------TTSCSSSCEEEEEECT
T ss_pred EeecCCCCccccCCCeEEEEEEcCCCCEEE--EeCC-hhheEcCCCCeEEEEecCCCC------CCCCCCCcEEEEEEeC
Confidence 22211 135689999888887543 3334 688899876543322111100 0112234589999988
Q ss_pred CCCEEEEecCCCcEEEEEcccceeeeeec------CCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeec-
Q 021247 169 DGRRIACGSMDGTISVFDVTRAKFLHHLE------GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSG- 241 (315)
Q Consensus 169 ~~~~l~~~s~dg~i~i~d~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~- 241 (315)
+|. |..|+.++.|..++..+........ .....|.++...+ ++ .|..|+.++-|..||.+++........
T Consensus 320 ~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~-~g-~lWiGt~~~Gl~~~~~~~~~~~~~~~~~ 396 (795)
T 4a2l_A 320 QGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDK-DK-NLWIGTNDGGLNLYNPITQRFTSYTLQE 396 (795)
T ss_dssp TSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECT-TS-CEEEEESSSCEEEECTTTCCEEEECCC-
T ss_pred CcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECC-CC-CEEEEECCCCeEEEcCCCCcEEEEecCC
Confidence 876 5567777889999876654322111 1234688888765 33 455677777799999887655433211
Q ss_pred -------ccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehccc----ccccceEEEEEeeCCCEEEEEeCCCcEE
Q 021247 242 -------HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMT----NHTDQVWGVSFRPLGGRVVSVSDDKSIS 310 (315)
Q Consensus 242 -------~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~s~~~d~~i~ 310 (315)
....|.++..+++++.|..|+.++-+..+|..+++...-.. .....|.++...++|...+... + -+.
T Consensus 397 ~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~ 474 (795)
T 4a2l_A 397 DESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-S-ALV 474 (795)
T ss_dssp -----CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-S-CEE
T ss_pred CCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-C-cee
Confidence 13568899998888856667777779999987654332111 2345788999888887655543 3 466
Q ss_pred Eee
Q 021247 311 LYE 313 (315)
Q Consensus 311 i~~ 313 (315)
+|+
T Consensus 475 ~~~ 477 (795)
T 4a2l_A 475 RFN 477 (795)
T ss_dssp EEE
T ss_pred EEe
Confidence 665
No 260
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.01 E-value=5.6e-08 Score=88.57 Aligned_cols=264 Identities=11% Similarity=0.087 Sum_probs=142.8
Q ss_pred EEEEeeCCC-----------cEEEEcCCCCcceee--c-cccccceEEEEeCCCCCEEEEeeC-CCeEEEEECCCCceeE
Q 021247 32 LLLTGSLDE-----------TVKLWRPDDMQLERT--N-TGHCLGVVSVAAHPSGIIAASASL-DSFVRVFDVDTNASIA 96 (315)
Q Consensus 32 ~l~sgs~d~-----------~v~~w~~~~~~~~~~--~-~~h~~~v~~~~~~~~g~~l~s~~~-d~~i~~w~~~~~~~~~ 96 (315)
+++.|+.+. .+.+||+.+.+-... . ..+.....++.+..+|.+++.|+. +..+++||..+++-..
T Consensus 200 l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~ 279 (656)
T 1k3i_A 200 VLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIP 279 (656)
T ss_dssp EEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEE
T ss_pred EEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeE
Confidence 677776543 578899876653222 1 112223335667789999999884 4689999998765433
Q ss_pred EeeCCcc-cEEEEEECCCCCeEEEEec-CC-----CeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCC
Q 021247 97 TLEASPS-EVWQMQFDPKGTTLAVAGG-GS-----ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169 (315)
Q Consensus 97 ~~~~~~~-~v~~~~~~~~~~~~~~~~~-~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 169 (315)
.-..... .-..+...++++.+ +.|+ .+ ..+.+||..+.+....-... ..+.....+. ..+..+
T Consensus 280 ~~~~~~~R~~~s~~~~~dg~iy-v~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~----~~p~~~~~~~-----~~~~~~ 349 (656)
T 1k3i_A 280 GPDMQVARGYQSSATMSDGRVF-TIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAK----VNPMLTADKQ-----GLYRSD 349 (656)
T ss_dssp CCCCSSCCSSCEEEECTTSCEE-EECCCCCSSSCCCCEEEEETTTTEEEEETTSC----SGGGCCCCTT-----GGGTTT
T ss_pred CCCCCccccccceEEecCCeEE-EEeCcccCCcccccceEeCCCCCcceeCCCcc----cccccccccc-----ceeecC
Confidence 2111111 11234455666644 5555 33 56899999875543221000 0000000000 011223
Q ss_pred CCEEEEecCC---------CcEEEEEcccceeeeeecCCcc---------ceEEEEEcCCCCcEEEEEeCCC--------
Q 021247 170 GRRIACGSMD---------GTISVFDVTRAKFLHHLEGHFM---------PVRSLVYSPVDPRVLFSASDDT-------- 223 (315)
Q Consensus 170 ~~~l~~~s~d---------g~i~i~d~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~l~s~~~d~-------- 223 (315)
++.++.|+.+ ..+..||..+.........+.. .-.++.|...++++++.|+.+.
T Consensus 350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~ 429 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATT 429 (656)
T ss_dssp CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCC
T ss_pred CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCC
Confidence 3443444333 3578888877664433322211 2244555445778888888543
Q ss_pred ---eEEEEeCCCCeeEEEe--ecccccE-EEEEEcCCCCeEEEEeCC-----------CcEEEEecCccc--eehccccc
Q 021247 224 ---HVHMYDAEGKSLVTAM--SGHASWV-LSVDASPDGAAITTGSSD-----------RTVKLWDLNMRA--AMQSMTNH 284 (315)
Q Consensus 224 ---~i~~wd~~~~~~~~~~--~~~~~~i-~~~~~~~~~~~l~s~~~d-----------~~i~iwd~~~~~--~~~~~~~~ 284 (315)
.+.+||....+-.... .-..... .+....|++++++.|+.+ ..+.+||..+.+ .+..+...
T Consensus 430 ~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~ 509 (656)
T 1k3i_A 430 NAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIV 509 (656)
T ss_dssp CEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSC
T ss_pred cceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCc
Confidence 6788888765433221 1111111 234566899999999865 468899987643 22222222
Q ss_pred ccceEEEEEeeCCCEEEEEeC
Q 021247 285 TDQVWGVSFRPLGGRVVSVSD 305 (315)
Q Consensus 285 ~~~v~~~~~s~~~~~l~s~~~ 305 (315)
......+.+.|+|+.++.||.
T Consensus 510 R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 510 RVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCTTEEEEECTTSCEEEEECC
T ss_pred cccccHhhcCCCcEEEecCCC
Confidence 222234556789999898885
No 261
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.00 E-value=8.4e-06 Score=69.51 Aligned_cols=234 Identities=9% Similarity=0.003 Sum_probs=148.5
Q ss_pred EEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCC-CCEEEEeeCCCeEEEEECCCC----ceeEEeeCCcccEE
Q 021247 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPS-GIIAASASLDSFVRVFDVDTN----ASIATLEASPSEVW 106 (315)
Q Consensus 32 ~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~-g~~l~s~~~d~~i~~w~~~~~----~~~~~~~~~~~~v~ 106 (315)
+|+.+. ...|+..+++......... .-..+..+++++. +.++++-...+.|+.+++... .....+........
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 444433 4678888887655444333 3346788999975 456666666788999998752 22333333445677
Q ss_pred EEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEE-Eec-CCCcEEE
Q 021247 107 QMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIA-CGS-MDGTISV 184 (315)
Q Consensus 107 ~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~s-~dg~i~i 184 (315)
.+++++.+..++++-...+.|.+.++........+.. .......++++|.+..|+ +-. ..+.|..
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~-------------~~~~P~~iavdp~~g~ly~td~~~~~~I~~ 229 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-------------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKK 229 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC-------------SSCCEEEEEEETTTTEEEEEECSSSCCEEE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC-------------CCCCcceEEEecccCeEEEEeCCCCCEEEE
Confidence 8999987777888877788999998875433222210 112267899999655554 432 3478988
Q ss_pred EEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeec--ccccEEEEEEcCCCCeEEEEe
Q 021247 185 FDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSG--HASWVLSVDASPDGAAITTGS 262 (315)
Q Consensus 185 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~s~~ 262 (315)
.++........+.........++++|.+++++++-...+.|..+|+.+......... ......++++. .+.++++..
T Consensus 230 ~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~ 308 (400)
T 3p5b_L 230 GGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDI 308 (400)
T ss_dssp EETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEES
T ss_pred EeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecC
Confidence 888644333223333346789999987777777777788999999876544333332 23456677774 445667777
Q ss_pred CCCcEEEEecCccceehcc
Q 021247 263 SDRTVKLWDLNMRAAMQSM 281 (315)
Q Consensus 263 ~d~~i~iwd~~~~~~~~~~ 281 (315)
..+.|..++..+++.+..+
T Consensus 309 ~~~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 309 INEAIFSANRLTGSDVNLL 327 (400)
T ss_dssp SSCSEEEEESSSCCCCEEE
T ss_pred CCCeEEEEEcCCCCceEEE
Confidence 7888999986666554444
No 262
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.98 E-value=5.2e-07 Score=80.59 Aligned_cols=279 Identities=15% Similarity=0.065 Sum_probs=162.5
Q ss_pred cEEEEeeC-CCcEEEEcC-CCCcceeecccccc-c---------e-EEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEE
Q 021247 31 ALLLTGSL-DETVKLWRP-DDMQLERTNTGHCL-G---------V-VSVAAHPSGIIAASASLDSFVRVFDVDTNASIAT 97 (315)
Q Consensus 31 ~~l~sgs~-d~~v~~w~~-~~~~~~~~~~~h~~-~---------v-~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~ 97 (315)
..++.++. ++.|.-+|. .+++.......... . + ..+.+ .+..++.++.|+.+..+|..+++.+..
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~ 140 (571)
T 2ad6_A 63 DMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINWE 140 (571)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEEE
Confidence 35677777 899999998 78877654321110 0 0 01111 245667778899999999999998876
Q ss_pred eeCCccc-EEEEEECC--CCCeEEEEecC-----CCeEEEEecCCcceeeeecCCCCCC---CCCCc-------------
Q 021247 98 LEASPSE-VWQMQFDP--KGTTLAVAGGG-----SASVKLWDTATWNLIATLSIPRPEG---LKPTD------------- 153 (315)
Q Consensus 98 ~~~~~~~-v~~~~~~~--~~~~~~~~~~~-----d~~i~~~d~~~~~~~~~~~~~~~~~---~~~~~------------- 153 (315)
....... -..+.-.| .+..+++.... ++.|..+|.++++.+.++....+.. ..+..
T Consensus 141 ~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g 220 (571)
T 2ad6_A 141 VEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLG 220 (571)
T ss_dssp EECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHH
T ss_pred ecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccc
Confidence 6532200 00000011 12345444332 7899999999999988776432210 00000
Q ss_pred ---------cCCCCcceEEEEECCCCCEEEEecCC----------------CcEEEEEcccceeeeeecC--C-------
Q 021247 154 ---------KSSSKKFVLSVAWSPDGRRIACGSMD----------------GTISVFDVTRAKFLHHLEG--H------- 199 (315)
Q Consensus 154 ---------~~~~~~~i~~~~~~~~~~~l~~~s~d----------------g~i~i~d~~~~~~~~~~~~--~------- 199 (315)
.......-..+++.++...++.++.+ +.|..+|..+++.+-.... |
T Consensus 221 ~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~ 300 (571)
T 2ad6_A 221 TKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAG 300 (571)
T ss_dssp HHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCC
T ss_pred cccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccccccc
Confidence 00000001235666766666655432 3599999999887654432 2
Q ss_pred -ccceEEEEEcCCCC---cEEEEEeCCCeEEEEeCCCCeeEEEeeccc-------------ccE----------------
Q 021247 200 -FMPVRSLVYSPVDP---RVLFSASDDTHVHMYDAEGKSLVTAMSGHA-------------SWV---------------- 246 (315)
Q Consensus 200 -~~~v~~~~~~~~~~---~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~-------------~~i---------------- 246 (315)
..++. +...+ ++ ++++.++.+|.++++|.++++++-...-.. .++
T Consensus 301 ~~~p~l-~~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~ 378 (571)
T 2ad6_A 301 VNQMVL-TDQPV-NGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNI 378 (571)
T ss_dssp CCCCEE-EEEEE-TTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEE
T ss_pred CCCCEE-Eeccc-CCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEE
Confidence 12221 22212 34 367788899999999999887765443111 011
Q ss_pred ----------EEEEEcCCCCeEEEEe-------------------------------------CCCcEEEEecCccceeh
Q 021247 247 ----------LSVDASPDGAAITTGS-------------------------------------SDRTVKLWDLNMRAAMQ 279 (315)
Q Consensus 247 ----------~~~~~~~~~~~l~s~~-------------------------------------~d~~i~iwd~~~~~~~~ 279 (315)
..++++|+..+|+... .++.|..||+.+++.+-
T Consensus 379 ~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W 458 (571)
T 2ad6_A 379 CPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKW 458 (571)
T ss_dssp SSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEE
T ss_pred CCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEE
Confidence 1346777766665543 35789999998887654
Q ss_pred cccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 280 SMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 280 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
+... ...+.+..+...+..++.++.|+.|+.||.
T Consensus 459 ~~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~ 492 (571)
T 2ad6_A 459 TKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDN 492 (571)
T ss_dssp EEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEET
T ss_pred EecC-CCCccceeEEECCCEEEEEcCCCeEEEEEC
Confidence 4332 223333344556778888999999999984
No 263
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.98 E-value=3.9e-07 Score=81.38 Aligned_cols=267 Identities=10% Similarity=0.046 Sum_probs=154.1
Q ss_pred cEEEEeeCCCcEEEEcCCCCcceeecc--cccc--ceEEEEeCCCCCEEEEeeC-----CCeEEEEECCCCceeEEeeCC
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLERTNT--GHCL--GVVSVAAHPSGIIAASASL-----DSFVRVFDVDTNASIATLEAS 101 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~~~~~--~h~~--~v~~~~~~~~g~~l~s~~~-----d~~i~~w~~~~~~~~~~~~~~ 101 (315)
..++.++.|+.|..+|..+++...... .+.. .+.+-..-.++.+++..+. ++.|+.+|..+++.+..+...
T Consensus 116 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~ 195 (571)
T 2ad6_A 116 GQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFAT 195 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred CEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccC
Confidence 368888899999999998888765432 2111 1111000014544443332 799999999999988776543
Q ss_pred ccc-------------------------------------E-EEEEECCCCCeEEEEecC-----------C----CeEE
Q 021247 102 PSE-------------------------------------V-WQMQFDPKGTTLAVAGGG-----------S----ASVK 128 (315)
Q Consensus 102 ~~~-------------------------------------v-~~~~~~~~~~~~~~~~~~-----------d----~~i~ 128 (315)
... + ..+++++....+++..+. + +.|.
T Consensus 196 ~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~ 275 (571)
T 2ad6_A 196 GSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIW 275 (571)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEE
T ss_pred CCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEE
Confidence 211 0 124566666655554321 1 3699
Q ss_pred EEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCC---EEEEecCCCcEEEEEcccceeeeeecCCc-----
Q 021247 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGR---RIACGSMDGTISVFDVTRAKFLHHLEGHF----- 200 (315)
Q Consensus 129 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~l~~~s~dg~i~i~d~~~~~~~~~~~~~~----- 200 (315)
.+|.++++.+..+........ .......++. +....+|+ .++.++.+|.++++|..+++.+-......
T Consensus 276 Ald~~tG~~~W~~~~~~~d~~---d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 276 GRDLDTGMAKWGYQKTPHDEW---DFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEETTTCCEEEEEESSTTCSS---CCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEecCCCcEEEEecCCCCccc---ccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 999999999888765321100 0000111121 22224674 56778899999999999988765433211
Q ss_pred --------cce--------------------------EEEEEcCCCCcEEEEE---------------------------
Q 021247 201 --------MPV--------------------------RSLVYSPVDPRVLFSA--------------------------- 219 (315)
Q Consensus 201 --------~~v--------------------------~~~~~~~~~~~~l~s~--------------------------- 219 (315)
.++ ..++++|..+.+++..
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 111 1345666444333332
Q ss_pred ---------eCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehccccccc-ceE
Q 021247 220 ---------SDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTD-QVW 289 (315)
Q Consensus 220 ---------~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~ 289 (315)
..++.|..||..+++.+-..... ..+....+...+..++.++.|+.|+.||.++++.+-++..... .-.
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~ 510 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGS 510 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred ccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEee
Confidence 13578999999888766544322 1122222233456777799999999999999988766543221 112
Q ss_pred EEEEeeCCCEEEE
Q 021247 290 GVSFRPLGGRVVS 302 (315)
Q Consensus 290 ~~~~s~~~~~l~s 302 (315)
-+.+..+|+.++.
T Consensus 511 p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 511 PMTYSFKGKQYIG 523 (571)
T ss_dssp CEEEEETTEEEEE
T ss_pred eEEEEECCEEEEE
Confidence 2346677765443
No 264
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.94 E-value=4.5e-06 Score=68.81 Aligned_cols=226 Identities=9% Similarity=0.032 Sum_probs=141.7
Q ss_pred CCcEEEEcCCCCccee-eccccccceEEEEeCCC-CCEEEEeeCCCeEEEEECCCCcee-EEeeCCcccEEEEEECCCCC
Q 021247 39 DETVKLWRPDDMQLER-TNTGHCLGVVSVAAHPS-GIIAASASLDSFVRVFDVDTNASI-ATLEASPSEVWQMQFDPKGT 115 (315)
Q Consensus 39 d~~v~~w~~~~~~~~~-~~~~h~~~v~~~~~~~~-g~~l~s~~~d~~i~~w~~~~~~~~-~~~~~~~~~v~~~~~~~~~~ 115 (315)
...|+..+++...... .....-..+..+.|++. +.++++-...+.|+.+++...... ..+.........+++++.+.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 4678888887653111 11112234668889874 566677777789999998776421 22222223456788888777
Q ss_pred eEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEec--CCCcEEEEEcccceee
Q 021247 116 TLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS--MDGTISVFDVTRAKFL 193 (315)
Q Consensus 116 ~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s--~dg~i~i~d~~~~~~~ 193 (315)
.++++-...+.|.++++.......... ........+++.|.+..|+... ..+.|...++......
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~~~~l~~-------------~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~ 158 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSLRKVLFW-------------QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 158 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEEC-------------SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred eEEEEECCCCEEEEEECCCCcEEEEEe-------------CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE
Confidence 787777778899999986532211110 0112357899998655554333 3578888887533222
Q ss_pred eeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecC
Q 021247 194 HHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLN 273 (315)
Q Consensus 194 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~ 273 (315)
..........+.++++|.+++++++-+..+.|..+|..+........+.......+++.. +.++++-...+.|..++..
T Consensus 159 ~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 159 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKY 237 (318)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred EEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECC
Confidence 222222345689999987777777777889999999876443333333445567788763 4566677777889999886
Q ss_pred cccee
Q 021247 274 MRAAM 278 (315)
Q Consensus 274 ~~~~~ 278 (315)
+++..
T Consensus 238 ~G~~~ 242 (318)
T 3sov_A 238 TGEGL 242 (318)
T ss_dssp TCCSC
T ss_pred CCCce
Confidence 65543
No 265
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.92 E-value=2.4e-06 Score=76.50 Aligned_cols=280 Identities=14% Similarity=0.047 Sum_probs=160.6
Q ss_pred cEEEEeeC-CCcEEEEcC-CCCcceeecccccc----c-------eEEEEeCCCCCE----EEEeeCCCeEEEEECCCCc
Q 021247 31 ALLLTGSL-DETVKLWRP-DDMQLERTNTGHCL----G-------VVSVAAHPSGII----AASASLDSFVRVFDVDTNA 93 (315)
Q Consensus 31 ~~l~sgs~-d~~v~~w~~-~~~~~~~~~~~h~~----~-------v~~~~~~~~g~~----l~s~~~d~~i~~w~~~~~~ 93 (315)
..++.++. ++.|.-+|. .+++.......... + ...+.+.|.+.. ++.++.|+.+..+|..+++
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~ 142 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGE 142 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCC
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCC
Confidence 35777777 899999999 78877654322110 0 112334333333 6778889999999999999
Q ss_pred eeEEeeCCcc----cEEE-EEECCCCCeEEEEec-----CCCeEEEEecCCcceeeeecCCCCCCC---CCC--------
Q 021247 94 SIATLEASPS----EVWQ-MQFDPKGTTLAVAGG-----GSASVKLWDTATWNLIATLSIPRPEGL---KPT-------- 152 (315)
Q Consensus 94 ~~~~~~~~~~----~v~~-~~~~~~~~~~~~~~~-----~d~~i~~~d~~~~~~~~~~~~~~~~~~---~~~-------- 152 (315)
.+........ .+.. -.+. + ..+++.++ .++.|..+|.++++.+..+....+... .+.
T Consensus 143 ~~W~~~~~~~~~~~~~~ssP~v~-~-g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~ 220 (599)
T 1w6s_A 143 TVWKVENSDIKVGSTLTIAPYVV-K-DKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY 220 (599)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEE-T-TEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred EEEeecCCCCCccceeecCCEEE-C-CEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccc
Confidence 8776543220 1110 0011 2 33444332 378999999999999988765432100 000
Q ss_pred ------------c--cCCCCcceEEEEECCCCCEEEEecCC----------------CcEEEEEcccceeeeeecC--Cc
Q 021247 153 ------------D--KSSSKKFVLSVAWSPDGRRIACGSMD----------------GTISVFDVTRAKFLHHLEG--HF 200 (315)
Q Consensus 153 ------------~--~~~~~~~i~~~~~~~~~~~l~~~s~d----------------g~i~i~d~~~~~~~~~~~~--~~ 200 (315)
. .......-..+++.++...++.++.+ +.|..+|..+++.+-.+.. |.
T Consensus 221 g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d 300 (599)
T 1w6s_A 221 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD 300 (599)
T ss_dssp CCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTC
T ss_pred cccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCc
Confidence 0 00000000135566777777776654 3799999999987654432 21
Q ss_pred --------cceEEEEEcCCCC---cEEEEEeCCCeEEEEeCCCCeeEEEeecc------------c-ccE----------
Q 021247 201 --------MPVRSLVYSPVDP---RVLFSASDDTHVHMYDAEGKSLVTAMSGH------------A-SWV---------- 246 (315)
Q Consensus 201 --------~~v~~~~~~~~~~---~~l~s~~~d~~i~~wd~~~~~~~~~~~~~------------~-~~i---------- 246 (315)
.++. +.....++ ..++.++.+|.++++|.++++++-...-. . .++
T Consensus 301 ~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~ 379 (599)
T 1w6s_A 301 EWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMD 379 (599)
T ss_dssp SSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTT
T ss_pred cccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCC
Confidence 1221 22220234 46778889999999999988776543311 0 001
Q ss_pred ----------------EEEEEcCCCCeEEEEe---------------------------------------CCCcEEEEe
Q 021247 247 ----------------LSVDASPDGAAITTGS---------------------------------------SDRTVKLWD 271 (315)
Q Consensus 247 ----------------~~~~~~~~~~~l~s~~---------------------------------------~d~~i~iwd 271 (315)
..++++|+..++++.. .+|.+..||
T Consensus 380 ~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D 459 (599)
T 1w6s_A 380 HLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYN 459 (599)
T ss_dssp CCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEEC
T ss_pred CCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEE
Confidence 1245666555544321 347788888
Q ss_pred cCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 272 LNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 272 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
+.+++.+=+... ..+.++-.+...+..|+.++.|+.++.||.
T Consensus 460 ~~tG~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~ 501 (599)
T 1w6s_A 460 AITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDS 501 (599)
T ss_dssp TTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEET
T ss_pred CCCCCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEEC
Confidence 888765433221 122222223446778888999999998884
No 266
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.90 E-value=1.5e-05 Score=65.71 Aligned_cols=218 Identities=11% Similarity=0.037 Sum_probs=135.3
Q ss_pred CCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCc---ceeeeecCCCCCCCCCCccCCC
Q 021247 81 DSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATW---NLIATLSIPRPEGLKPTDKSSS 157 (315)
Q Consensus 81 d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~ 157 (315)
...|+..++........+. .......++|++.++.++++-...+.|..++.... .....+. +. .
T Consensus 9 ~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~-~~-----------~ 75 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SR-----------D 75 (316)
T ss_dssp BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE-CS-----------S
T ss_pred CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEE-eC-----------C
Confidence 3568999998776544443 34557799999988888888777889999998651 1111110 00 0
Q ss_pred CcceEEEEECCCCC-EEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCC-CeEEEEeCCCCee
Q 021247 158 KKFVLSVAWSPDGR-RIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD-THVHMYDAEGKSL 235 (315)
Q Consensus 158 ~~~i~~~~~~~~~~-~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-~~i~~wd~~~~~~ 235 (315)
......+++.+.+. ..++-...+.|.++|+........+.........+++.|.++.++++.... +.|...++.+...
T Consensus 76 ~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~ 155 (316)
T 1ijq_A 76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 155 (316)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE
T ss_pred CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe
Confidence 11245788887544 445667788999999865433222332334678999998777666666554 7899998875543
Q ss_pred EEEeecccccEEEEEEcCCCCeE-EEEeCCCcEEEEecCccceehcc-c--ccccceEEEEEeeCCCEEEEEeCCCcEEE
Q 021247 236 VTAMSGHASWVLSVDASPDGAAI-TTGSSDRTVKLWDLNMRAAMQSM-T--NHTDQVWGVSFRPLGGRVVSVSDDKSISL 311 (315)
Q Consensus 236 ~~~~~~~~~~i~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~-~--~~~~~v~~~~~s~~~~~l~s~~~d~~i~i 311 (315)
.......-.....++++|++..| ++-...+.|..+|++... .+.+ . .......++++. .+..+++-...+.|..
T Consensus 156 ~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~ 233 (316)
T 1ijq_A 156 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFS 233 (316)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEE
T ss_pred EEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEE
Confidence 32223344578899999876555 555566789999987422 2222 1 122346677774 3444455555677776
Q ss_pred ee
Q 021247 312 YE 313 (315)
Q Consensus 312 ~~ 313 (315)
++
T Consensus 234 ~~ 235 (316)
T 1ijq_A 234 AN 235 (316)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 267
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.90 E-value=2.7e-06 Score=70.27 Aligned_cols=233 Identities=11% Similarity=0.046 Sum_probs=137.7
Q ss_pred eEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeecc-------------------ccccceEEEEeCC-CCCEEE
Q 021247 17 VWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNT-------------------GHCLGVVSVAAHP-SGIIAA 76 (315)
Q Consensus 17 v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~-------------------~h~~~v~~~~~~~-~g~~l~ 76 (315)
..+++|.+.++ +++++..++.|..|+..+.+...... .....+..+.+.+ +|.+++
T Consensus 21 p~~i~~d~~g~----~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 21 PNSFTFDSTNK----GFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp CCCEECCTTCS----SEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred ceEEEEcCCCC----EEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 45566665433 58888889999999887654432110 0113478899997 676655
Q ss_pred EeeCCCeEEEEECCCCceeEEeeC-----CcccEEEEEECC-CCCeEEEEecC-----------------CCeEEEEecC
Q 021247 77 SASLDSFVRVFDVDTNASIATLEA-----SPSEVWQMQFDP-KGTTLAVAGGG-----------------SASVKLWDTA 133 (315)
Q Consensus 77 s~~~d~~i~~w~~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~~~~~~~~-----------------d~~i~~~d~~ 133 (315)
+ ...+.+..+|..++.. ..+.. .......+++.+ +|+.+ ++... ++.|..+|..
T Consensus 97 ~-d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~-v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 97 V-DCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVY-FTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp E-ETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEE-EEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred E-ECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEE-EECCcccccccccceehcccCCCceEEEEeCC
Confidence 4 3445588888765432 22211 113467889999 88644 44322 3668888876
Q ss_pred CcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEE-EecCCCcEEEEEcccce--eeeeecCCccceEEEEEcC
Q 021247 134 TWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIA-CGSMDGTISVFDVTRAK--FLHHLEGHFMPVRSLVYSP 210 (315)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~s~dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~ 210 (315)
+++....... ......++++|+++.|+ +-+.++.|..|++.... ....+..... ...+++.+
T Consensus 174 ~~~~~~~~~~--------------~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~ 238 (322)
T 2fp8_A 174 TKETTLLLKE--------------LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNA 238 (322)
T ss_dssp TTEEEEEEEE--------------ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECT
T ss_pred CCEEEEeccC--------------CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECC
Confidence 5443211100 01145799999998665 44667899999986421 0111111112 67788887
Q ss_pred CCCcEEEEEeC----------CCeEEEEeCCCCeeEEEeecc----cccEEEEEEcCCCCeEEEEeCCCcEEEEecCc
Q 021247 211 VDPRVLFSASD----------DTHVHMYDAEGKSLVTAMSGH----ASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274 (315)
Q Consensus 211 ~~~~~l~s~~~----------d~~i~~wd~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 274 (315)
++.++++... .+.|..+|.. ++.+..+... ...+..+.+ .++++.++...++.|..+++..
T Consensus 239 -~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 239 -DGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp -TSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred -CCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 4566666544 4678889876 4455444322 234556665 4666666666788899988764
No 268
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.87 E-value=1.4e-05 Score=71.53 Aligned_cols=266 Identities=16% Similarity=0.153 Sum_probs=153.1
Q ss_pred cEEEEeeCCCcEEEEcCCCCcceeeccc--ccc--ceE---EEEeC-CCCC-EEEEee------CCCeEEEEECCCCcee
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLERTNTG--HCL--GVV---SVAAH-PSGI-IAASAS------LDSFVRVFDVDTNASI 95 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~~~~~~--h~~--~v~---~~~~~-~~g~-~l~s~~------~d~~i~~w~~~~~~~~ 95 (315)
..++.++.|+.|.-+|.++++....... +.. .+. .+.-. .+|+ .++.++ .++.|+.+|..+++.+
T Consensus 118 ~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~ 197 (582)
T 1flg_A 118 DKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEI 197 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEE
T ss_pred CEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEE
Confidence 4688889999999999988887654321 110 111 11111 1233 455544 3789999999999887
Q ss_pred EEeeCCccc----------------------------------------E-EEEEECCCCCeEEEEecC-----------
Q 021247 96 ATLEASPSE----------------------------------------V-WQMQFDPKGTTLAVAGGG----------- 123 (315)
Q Consensus 96 ~~~~~~~~~----------------------------------------v-~~~~~~~~~~~~~~~~~~----------- 123 (315)
......... + ..++++|....+++..+.
T Consensus 198 W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~ 277 (582)
T 1flg_A 198 WMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTA 277 (582)
T ss_dssp EEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSC
T ss_pred eecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccccc
Confidence 655432100 0 124566666666554431
Q ss_pred --------C----CeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEEC-CCCC---EEEEecCCCcEEEEEc
Q 021247 124 --------S----ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS-PDGR---RIACGSMDGTISVFDV 187 (315)
Q Consensus 124 --------d----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~---~l~~~s~dg~i~i~d~ 187 (315)
| +.|..+|..+++.+..+......... .......+. +... .+|+ .++.++.+|.++++|.
T Consensus 278 ~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd---~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~ 353 (582)
T 1flg_A 278 KGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWD---FSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDR 353 (582)
T ss_dssp TTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSC---CCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEET
T ss_pred CCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCccc---ccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEEC
Confidence 2 68999999999999887543221100 000011121 1221 4564 6788999999999999
Q ss_pred ccceeeeeecCCc-------------cce--------------------------------EEEEEcCCCCcEEEEEe--
Q 021247 188 TRAKFLHHLEGHF-------------MPV--------------------------------RSLVYSPVDPRVLFSAS-- 220 (315)
Q Consensus 188 ~~~~~~~~~~~~~-------------~~v--------------------------------~~~~~~~~~~~~l~s~~-- 220 (315)
.+++.+-...... .++ ..++++|..+.+++...
T Consensus 354 ~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~ 433 (582)
T 1flg_A 354 SNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHW 433 (582)
T ss_dssp TTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECE
T ss_pred CCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhc
Confidence 9988764433211 000 12345553333333221
Q ss_pred ------------------------------CCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEE
Q 021247 221 ------------------------------DDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLW 270 (315)
Q Consensus 221 ------------------------------~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iw 270 (315)
.++.|.-||+.+++.+=+..... ....-.+...+.+++.|+.|+.++.|
T Consensus 434 ~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~ 512 (582)
T 1flg_A 434 KEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAF 512 (582)
T ss_dssp EEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEE
T ss_pred ceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEE
Confidence 35789999998887654433221 11111112245678889999999999
Q ss_pred ecCccceehcccccccc-eEEEEEeeCCCEEE
Q 021247 271 DLNMRAAMQSMTNHTDQ-VWGVSFRPLGGRVV 301 (315)
Q Consensus 271 d~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~ 301 (315)
|.++++.+-++...... ..-+.+..+|+..+
T Consensus 513 D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv 544 (582)
T 1flg_A 513 DAKSGKELWKFQTGSGIVSPPITWEQDGEQYL 544 (582)
T ss_dssp ETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred ECCCCCEEEEecCCCCcccCceEEEECCEEEE
Confidence 99999887665443221 11256778887443
No 269
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.86 E-value=6.6e-06 Score=67.80 Aligned_cols=221 Identities=8% Similarity=0.001 Sum_probs=133.6
Q ss_pred CCeEEEEECCCCc-eeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCc
Q 021247 81 DSFVRVFDVDTNA-SIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKK 159 (315)
Q Consensus 81 d~~i~~w~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (315)
...|+..++.... ....+.........++|++.+..++.+-...+.|..++.........+.. ....
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~------------~~l~ 79 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV------------SGLL 79 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEE------------ECCS
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEc------------CCCC
Confidence 4679999988763 22222222235668899998777888877788899898865421111100 0011
Q ss_pred ceEEEEECCC-CCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEe-CCCeEEEEeCCCCeeEE
Q 021247 160 FVLSVAWSPD-GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSAS-DDTHVHMYDAEGKSLVT 237 (315)
Q Consensus 160 ~i~~~~~~~~-~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~d~~i~~wd~~~~~~~~ 237 (315)
....+++.+. ++.+++-...+.|.++++................+.+++.|.++.++++-. ..+.|...++.+.....
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 159 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI 159 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE
Confidence 2457888874 455566667789999998654322222234456789999986666666653 36789999987654333
Q ss_pred EeecccccEEEEEEcCCCCeE-EEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 238 AMSGHASWVLSVDASPDGAAI-TTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 238 ~~~~~~~~i~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
.....-...+.++++|++..| ++-...+.|..++++................++++.. +..+.+-...+.|..++.
T Consensus 160 ~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 160 IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNK 236 (318)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred EEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEEC
Confidence 333334567899999965544 5555677899999874222111222234566777743 333445445566666653
No 270
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.83 E-value=8.9e-06 Score=70.04 Aligned_cols=235 Identities=9% Similarity=0.069 Sum_probs=139.1
Q ss_pred ceEEEEeCC-CCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCC----eEEEEecCCcc
Q 021247 62 GVVSVAAHP-SGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSA----SVKLWDTATWN 136 (315)
Q Consensus 62 ~v~~~~~~~-~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~----~i~~~d~~~~~ 136 (315)
....++++| ++..|..+...+.|+.+|+..+...... ........++++++++.++++....+ .+..++. .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence 346788887 3444444444478999998876543333 34456789999999997777654332 2333332 222
Q ss_pred ee--eeecCCCCCCCCCCccCCCCcceEEEEECC-CCCEEEEecCCCcEEEEEcccceeeeeec-CCccceEEEEEcCCC
Q 021247 137 LI--ATLSIPRPEGLKPTDKSSSKKFVLSVAWSP-DGRRIACGSMDGTISVFDVTRAKFLHHLE-GHFMPVRSLVYSPVD 212 (315)
Q Consensus 137 ~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~s~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~ 212 (315)
.. ..+. .......++++| ++..+++-..++.|..+|...+....... ......+.++|+|.+
T Consensus 216 ~~~~~~l~--------------~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG 281 (430)
T 3tc9_A 216 FKVITELT--------------KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSG 281 (430)
T ss_dssp SCSEEEEE--------------ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTS
T ss_pred eeeeeeec--------------cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCC
Confidence 21 1110 011245788999 67777777778899999987665422221 112346789999955
Q ss_pred CcEEEEEeCCCeEEEEeCCC--Cee--EEEeecc---------------cccEE-EEEEc--------CCCCeEEEEeCC
Q 021247 213 PRVLFSASDDTHVHMYDAEG--KSL--VTAMSGH---------------ASWVL-SVDAS--------PDGAAITTGSSD 264 (315)
Q Consensus 213 ~~~l~s~~~d~~i~~wd~~~--~~~--~~~~~~~---------------~~~i~-~~~~~--------~~~~~l~s~~~d 264 (315)
..++++-...+.|..++... +.+ +..+.+. -.... .+... +++.+.++-..+
T Consensus 282 ~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n 361 (430)
T 3tc9_A 282 NYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDREN 361 (430)
T ss_dssp SEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGG
T ss_pred CEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCC
Confidence 44677777788999987653 221 1111111 11233 45553 346666666667
Q ss_pred CcEEEEecCccceehccccc------------------ccceEEEEEeeC-CCEEEEEeCCCcEEEeec
Q 021247 265 RTVKLWDLNMRAAMQSMTNH------------------TDQVWGVSFRPL-GGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 265 ~~i~iwd~~~~~~~~~~~~~------------------~~~v~~~~~s~~-~~~l~s~~~d~~i~i~~~ 314 (315)
+.|+.++.. +... ++.+. -...++++++|+ +..+++-....+|+.++.
T Consensus 362 ~~I~~i~~~-G~v~-~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 362 HCIRILTPQ-GRVT-TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp TEEEEECTT-SEEE-EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred cEEEEECCC-CcEE-EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 888888843 3322 22111 125789999995 555566666678888775
No 271
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.82 E-value=2.6e-05 Score=69.79 Aligned_cols=277 Identities=13% Similarity=0.103 Sum_probs=159.3
Q ss_pred cEEEEeeCCCcEEEEcCCCCcceeeccccccc-e--------EEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCC
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLG-V--------VSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAS 101 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~-v--------~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~ 101 (315)
..++.++.++.|.-+|..+++........... . ..+.+ .+..++.++.|+.+..+|..+++.+......
T Consensus 69 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~ 146 (582)
T 1flg_A 69 GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKFA 146 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEECS
T ss_pred CEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecCC
Confidence 35666676455888898888776544322110 0 11111 2456677888999999999999988766543
Q ss_pred c---------ccEEEEEEC-CCCCeEEEEec------CCCeEEEEecCCcceeeeecCCCC---------------CCCC
Q 021247 102 P---------SEVWQMQFD-PKGTTLAVAGG------GSASVKLWDTATWNLIATLSIPRP---------------EGLK 150 (315)
Q Consensus 102 ~---------~~v~~~~~~-~~~~~~~~~~~------~d~~i~~~d~~~~~~~~~~~~~~~---------------~~~~ 150 (315)
. .++ +.-. .+++..++.+. .++.|..+|..+++.+........ .+..
T Consensus 147 ~~~~~~~~~~sP~--v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~ 224 (582)
T 1flg_A 147 DHGAGYTMTGAPT--IVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAP 224 (582)
T ss_dssp CGGGTCBCCSCCE--EEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCT
T ss_pred CCCcCcccccCCE--EeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccc
Confidence 2 122 1111 12332334443 378999999999998876543210 0000
Q ss_pred --CCc------------cCCCCcceEEEEECCCCCEEEEecC--------------------C----CcEEEEEccccee
Q 021247 151 --PTD------------KSSSKKFVLSVAWSPDGRRIACGSM--------------------D----GTISVFDVTRAKF 192 (315)
Q Consensus 151 --~~~------------~~~~~~~i~~~~~~~~~~~l~~~s~--------------------d----g~i~i~d~~~~~~ 192 (315)
+.. ......+ ..++++|+...++.++. | +.|..+|+.+++.
T Consensus 225 ~w~~~~~~~~g~~~~~~~gGg~~w-~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~ 303 (582)
T 1flg_A 225 SWPDDRNSPTGKVESWSHGGGAPW-QSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEV 303 (582)
T ss_dssp TSCBCTTSTTSBCGGGGGCBCCCC-SCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCE
T ss_pred cCCCccccccccccccccCCcccc-CCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCE
Confidence 000 0000111 24667777777765542 2 5799999999987
Q ss_pred eeeec--CCc--------cceEEEEEcCCCC---cEEEEEeCCCeEEEEeCCCCeeEEEeeccc--ccEE----------
Q 021247 193 LHHLE--GHF--------MPVRSLVYSPVDP---RVLFSASDDTHVHMYDAEGKSLVTAMSGHA--SWVL---------- 247 (315)
Q Consensus 193 ~~~~~--~~~--------~~v~~~~~~~~~~---~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~--~~i~---------- 247 (315)
+-... .|. .++. +.....++ .+++.++.+|.++++|.++++++-...... .+..
T Consensus 304 ~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~ 382 (582)
T 1flg_A 304 KWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPV 382 (582)
T ss_dssp EEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEE
T ss_pred EEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEe
Confidence 65543 221 1221 22210134 478889999999999999887765443211 0000
Q ss_pred ---------------------------------EEEEcCCCCeEEEEe--------------------------------
Q 021247 248 ---------------------------------SVDASPDGAAITTGS-------------------------------- 262 (315)
Q Consensus 248 ---------------------------------~~~~~~~~~~l~s~~-------------------------------- 262 (315)
.++++|+..++++..
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~ 462 (582)
T 1flg_A 383 EREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYD 462 (582)
T ss_dssp ECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCS
T ss_pred EccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCC
Confidence 235566544444432
Q ss_pred -CCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 263 -SDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 263 -~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
.+|.|..||+.+++.+=+.... .++++-.....+..++.++.|+.++.||.
T Consensus 463 ~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~ 514 (582)
T 1flg_A 463 DHVGSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDA 514 (582)
T ss_dssp SCSEEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred CCcceEEEEECCCCCEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEEC
Confidence 3578999999888764333222 22333233345778888999999999984
No 272
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.82 E-value=1.4e-05 Score=63.25 Aligned_cols=201 Identities=15% Similarity=0.145 Sum_probs=129.4
Q ss_pred eeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEec
Q 021247 98 LEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS 177 (315)
Q Consensus 98 ~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s 177 (315)
+..-...+..++++|+++.++++...++.|...|.. ++.+..+.+... .-...+++.+++.++++.-
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~------------~D~EGIa~~~~g~~~vs~E 88 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV------------KDLETIEYIGDNQFVISDE 88 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC------------SSEEEEEECSTTEEEEEET
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC------------CChHHeEEeCCCEEEEEEC
Confidence 334456799999999888787777788999999997 777777654221 1156788888887767766
Q ss_pred CCCcEEEEEccccee---eeeec------CCccceEEEEEcCCCCcEEEEEeCCC-eEEEEeCC-CCeeEEEee------
Q 021247 178 MDGTISVFDVTRAKF---LHHLE------GHFMPVRSLVYSPVDPRVLFSASDDT-HVHMYDAE-GKSLVTAMS------ 240 (315)
Q Consensus 178 ~dg~i~i~d~~~~~~---~~~~~------~~~~~v~~~~~~~~~~~~l~s~~~d~-~i~~wd~~-~~~~~~~~~------ 240 (315)
.++.+.++++..... +.... ..+.....++|.|.+.+++++.-.+. .|+.|+.. ....+....
T Consensus 89 ~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~ 168 (255)
T 3qqz_A 89 RDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQR 168 (255)
T ss_dssp TTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHH
T ss_pred CCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhcc
Confidence 678899988754331 22221 12445689999996666666555554 56666621 111111111
Q ss_pred -cccccEEEEEEcCC-CCeEEEEeCCCcEEEEecCccceehccccc---------ccceEEEEEeeCCCEEEEEeCCCcE
Q 021247 241 -GHASWVLSVDASPD-GAAITTGSSDRTVKLWDLNMRAAMQSMTNH---------TDQVWGVSFRPLGGRVVSVSDDKSI 309 (315)
Q Consensus 241 -~~~~~i~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~---------~~~v~~~~~s~~~~~l~s~~~d~~i 309 (315)
.+...+.+++++|. +++++.....+.+.++|... +.+..+.-. -.+...|+|.++|+ |..+++...+
T Consensus 169 ~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~ 246 (255)
T 3qqz_A 169 QFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRF 246 (255)
T ss_dssp TCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEE
T ss_pred ccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceE
Confidence 12334678999995 55667777777888888763 343332211 13678999999997 5555777766
Q ss_pred EEee
Q 021247 310 SLYE 313 (315)
Q Consensus 310 ~i~~ 313 (315)
..|.
T Consensus 247 y~f~ 250 (255)
T 3qqz_A 247 YRFT 250 (255)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6553
No 273
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.82 E-value=3e-05 Score=71.64 Aligned_cols=227 Identities=9% Similarity=-0.015 Sum_probs=143.0
Q ss_pred CCcEEEEcCCCCcceeeccccccceEEEEeCC-CCCEEEEeeCCCeEEEEECCCC----ceeEEeeCCcccEEEEEECCC
Q 021247 39 DETVKLWRPDDMQLERTNTGHCLGVVSVAAHP-SGIIAASASLDSFVRVFDVDTN----ASIATLEASPSEVWQMQFDPK 113 (315)
Q Consensus 39 d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~-~g~~l~s~~~d~~i~~w~~~~~----~~~~~~~~~~~~v~~~~~~~~ 113 (315)
...|+..+++......... ....+..+++++ .+.++++-...+.|+.+++... .....+.........+++++.
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~ 481 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 481 (791)
T ss_dssp BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred ccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeec
Confidence 3567777776554433333 234567888887 4566667677788999998753 222333333445668899988
Q ss_pred CCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEE-EEecC-CCcEEEEEcccce
Q 021247 114 GTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI-ACGSM-DGTISVFDVTRAK 191 (315)
Q Consensus 114 ~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~s~-dg~i~i~d~~~~~ 191 (315)
+..++++-...+.|.+.++........+.. .......|+++|.+.+| ++-.. .+.|...++....
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~-------------~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~ 548 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGVKRKTLFRE-------------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 548 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEEC-------------TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred CCcEEEEecCCCeEEEEeCCCCeEEEEEeC-------------CCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc
Confidence 888888888889999999875432222110 11226789999975554 44333 3788888886544
Q ss_pred eeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeec--ccccEEEEEEcCCCCeEEEEeCCCcEEE
Q 021247 192 FLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSG--HASWVLSVDASPDGAAITTGSSDRTVKL 269 (315)
Q Consensus 192 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~s~~~d~~i~i 269 (315)
....+.......+.|++.+.+++++++-...+.|..+++.+......... ......+|++.. +.++++-...+.|..
T Consensus 549 ~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~ 627 (791)
T 3m0c_C 549 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFS 627 (791)
T ss_dssp EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEE
Confidence 33333333456789999987777777767778999999876654444332 223456777743 355666667788888
Q ss_pred EecCccceehc
Q 021247 270 WDLNMRAAMQS 280 (315)
Q Consensus 270 wd~~~~~~~~~ 280 (315)
.+..+++.+..
T Consensus 628 ~dk~tG~~~~~ 638 (791)
T 3m0c_C 628 ANRLTGSDVNL 638 (791)
T ss_dssp EETTTCCCCEE
T ss_pred EeCCCCcceEE
Confidence 88666544433
No 274
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.81 E-value=4.2e-05 Score=65.19 Aligned_cols=219 Identities=11% Similarity=0.025 Sum_probs=137.6
Q ss_pred CCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcc----eeeeecCCCCCCCCCCccC
Q 021247 80 LDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWN----LIATLSIPRPEGLKPTDKS 155 (315)
Q Consensus 80 ~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~----~~~~~~~~~~~~~~~~~~~ 155 (315)
....|+..++........+ .....+..++|++.+..++++-...+.|..+++.... ....+.
T Consensus 90 ~~~~I~~i~l~~~~~~~~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~------------- 155 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS------------- 155 (400)
T ss_dssp ETTEEEEECTTSCSCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC-------------
T ss_pred ccceeEEEccCCcceeEec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe-------------
Confidence 3467999998876544433 3456678999999888888887777889888876421 111110
Q ss_pred CCCcceEEEEECC-CCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeC-CCeEEEEeCCCC
Q 021247 156 SSKKFVLSVAWSP-DGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASD-DTHVHMYDAEGK 233 (315)
Q Consensus 156 ~~~~~i~~~~~~~-~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-d~~i~~wd~~~~ 233 (315)
........+++.+ .+++.++-...+.|.+.++........+.......+.+++.|.++.++++-.. .+.|...++.+.
T Consensus 156 ~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~ 235 (400)
T 3p5b_L 156 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 235 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC
T ss_pred CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC
Confidence 0112367899988 45555666778899999987554333333344457899999877766666543 478999998865
Q ss_pred eeEEEeecccccEEEEEEcCCCCeEEEE-eCCCcEEEEecCccceehcccc--cccceEEEEEeeCCCEEEEEeCCCcEE
Q 021247 234 SLVTAMSGHASWVLSVDASPDGAAITTG-SSDRTVKLWDLNMRAAMQSMTN--HTDQVWGVSFRPLGGRVVSVSDDKSIS 310 (315)
Q Consensus 234 ~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~d~~i~ 310 (315)
.........-...+.|+++|++..|..+ ...+.|..+|++.......... .-....++++. .+..+.+-...+.|.
T Consensus 236 ~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~ 314 (400)
T 3p5b_L 236 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIF 314 (400)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEE
T ss_pred ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEE
Confidence 5444444444678999999876655444 5567899999874322211121 22345577763 233344555557777
Q ss_pred Eee
Q 021247 311 LYE 313 (315)
Q Consensus 311 i~~ 313 (315)
.++
T Consensus 315 ~~~ 317 (400)
T 3p5b_L 315 SAN 317 (400)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 275
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.80 E-value=3.7e-06 Score=75.30 Aligned_cols=262 Identities=14% Similarity=0.154 Sum_probs=148.7
Q ss_pred EEEeeCCCcEEEEcCCCCcceeeccc--ccc--ceEEEEeCCCCCEEEEee-----CCCeEEEEECCCCceeEEeeCCcc
Q 021247 33 LLTGSLDETVKLWRPDDMQLERTNTG--HCL--GVVSVAAHPSGIIAASAS-----LDSFVRVFDVDTNASIATLEASPS 103 (315)
Q Consensus 33 l~sgs~d~~v~~w~~~~~~~~~~~~~--h~~--~v~~~~~~~~g~~l~s~~-----~d~~i~~w~~~~~~~~~~~~~~~~ 103 (315)
++.++.|+.|.-+|..+++....... +.. .+.+--.-.++.+++..+ .++.|+.+|..+++.+..+.....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~ 203 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGP 203 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSC
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCC
Confidence 88888999999999988887654321 110 111100001454444332 489999999999998877654321
Q ss_pred c-------------------------------------EE-EEEECCCCCeEEEEecC---------------CCeEEEE
Q 021247 104 E-------------------------------------VW-QMQFDPKGTTLAVAGGG---------------SASVKLW 130 (315)
Q Consensus 104 ~-------------------------------------v~-~~~~~~~~~~~~~~~~~---------------d~~i~~~ 130 (315)
. +| ..++++....+++..+. ...|..+
T Consensus 204 ~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Al 283 (599)
T 1w6s_A 204 DKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGR 283 (599)
T ss_dssp HHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEE
T ss_pred ccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEE
Confidence 1 11 34556666655544332 1479999
Q ss_pred ecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEEC-CCC---CEEEEecCCCcEEEEEcccceeeeeecCC-------
Q 021247 131 DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS-PDG---RRIACGSMDGTISVFDVTRAKFLHHLEGH------- 199 (315)
Q Consensus 131 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~---~~l~~~s~dg~i~i~d~~~~~~~~~~~~~------- 199 (315)
|.++++.+..+.......- .......++. +... .+| ..++.++.+|.++++|.++++.+-.....
T Consensus 284 d~~TG~~~W~~q~~~~d~w---d~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~ 359 (599)
T 1w6s_A 284 DADTGEAKFGYQKTPHDEW---DYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFK 359 (599)
T ss_dssp ETTTCCEEEEEESSTTCSS---CCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred eCCCCceeeEeecCCCccc---cccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccc
Confidence 9999999888765322100 0000111121 2222 466 46777889999999999998876543211
Q ss_pred ------ccce--------------------------EEEEEcCCCCcEEEEE----------------------------
Q 021247 200 ------FMPV--------------------------RSLVYSPVDPRVLFSA---------------------------- 219 (315)
Q Consensus 200 ------~~~v--------------------------~~~~~~~~~~~~l~s~---------------------------- 219 (315)
..++ ..++++|..+ +++..
T Consensus 360 ~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 438 (599)
T 1w6s_A 360 SVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRE-LFFMGINHICMDWEPFMLPYKAGQFFVGATLNM 438 (599)
T ss_dssp EECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT-EEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCC-EEEEeccccceeeecccccccCCcceeccccee
Confidence 0111 1234454322 22221
Q ss_pred -----e------CCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehccccccc-c
Q 021247 220 -----S------DDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTD-Q 287 (315)
Q Consensus 220 -----~------~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~ 287 (315)
+ .++.|.-||+.+++.+=..... .....-.+...+.+++.++.|+.++.||.++++.+-++..... .
T Consensus 439 ~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~ 517 (599)
T 1w6s_A 439 YPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAI 517 (599)
T ss_dssp EECTTSBTTTTBCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred ccCCcCCcccCCCcCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcE
Confidence 1 3478888998888765443211 1111111222456777899999999999999987755543221 1
Q ss_pred eEEEEEeeCCCEE
Q 021247 288 VWGVSFRPLGGRV 300 (315)
Q Consensus 288 v~~~~~s~~~~~l 300 (315)
..-+.+..+|+..
T Consensus 518 ~~P~~y~~~G~qy 530 (599)
T 1w6s_A 518 GYPMTYTHKGTQY 530 (599)
T ss_dssp SCCEEEEETTEEE
T ss_pred eccEEEEeCCEEE
Confidence 1225566777643
No 276
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.79 E-value=6.2e-05 Score=70.00 Aligned_cols=274 Identities=11% Similarity=0.101 Sum_probs=163.0
Q ss_pred cceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeecc--------------ccccceEEEEeCCCCCEEEEeeC
Q 021247 15 ESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNT--------------GHCLGVVSVAAHPSGIIAASASL 80 (315)
Q Consensus 15 ~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~--------------~h~~~v~~~~~~~~g~~l~s~~~ 80 (315)
..|+++...+. ..|..|...+-|.+++..+.+...... -....|.++...++|.+- .|..
T Consensus 258 ~~i~~i~~d~~-----g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lW-igt~ 331 (781)
T 3v9f_A 258 SYIFSIKQLKD-----NKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIW-IGTW 331 (781)
T ss_dssp CCEEEEEECTT-----SEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEE-EEEB
T ss_pred ceEEEEEECCC-----CCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEE-EEec
Confidence 45777765433 347777775678888876654322111 123568999999988754 4666
Q ss_pred CCeEEEEECCCCceeEEee----------CCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCC
Q 021247 81 DSFVRVFDVDTNASIATLE----------ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK 150 (315)
Q Consensus 81 d~~i~~w~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~ 150 (315)
++-|..++....... .+. .....|.++..++++... .|..++-|..||..+.+.. .+. .+.
T Consensus 332 ~~Gl~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW--igt~~~Gl~~~~~~~~~~~-~~~--~~~--- 402 (781)
T 3v9f_A 332 GGGINFISNAPPTFH-TWSYSPTQMNESSLSNKVVSSVCDDGQGKLW--IGTDGGGINVFENGKRVAI-YNK--ENR--- 402 (781)
T ss_dssp SSCEEEECSSCCSCE-EEC----CCCSSCCSSSCEEEEEECTTSCEE--EEEBSSCEEEEETTEEEEE-CC---------
T ss_pred CCeEEEeCCCCCcce-eeccCccccccCCCCCcceEEEEEcCCCCEE--EEeCCCcEEEEECCCCeEE-Ecc--CCC---
Confidence 677888887765432 221 123568888888877744 3444566888887654322 111 000
Q ss_pred CCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeec--CCccceEEEEEcCCCCcEEEEEeCCCeEEEE
Q 021247 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLE--GHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 228 (315)
Q Consensus 151 ~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~w 228 (315)
......|.++...++++. ..|+.++.+..+|..+++...... .....|.++...+ ++. |..|+. +-|..|
T Consensus 403 ----~~~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~-lwigt~-~Gl~~~ 474 (781)
T 3v9f_A 403 ----ELLSNSVLCSLKDSEGNL-WFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDK-NKK-IWIGTH-AGVFVI 474 (781)
T ss_dssp -----CCCSBEEEEEECTTSCE-EEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECT-TSE-EEEEET-TEEEEE
T ss_pred ----CCCCcceEEEEECCCCCE-EEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECC-CCC-EEEEEC-CceEEE
Confidence 112345888888877764 446676789999987766433221 1345688887765 444 444555 568899
Q ss_pred eCCCCeeEEEeecc-----cccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehccc---ccccceEEEEEeeCCCEE
Q 021247 229 DAEGKSLVTAMSGH-----ASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMT---NHTDQVWGVSFRPLGGRV 300 (315)
Q Consensus 229 d~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l 300 (315)
|.++++........ ...|.++..+++|.+.+ |+.++-+..+|.+.++...-.. .....|.++...++|...
T Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW 553 (781)
T 3v9f_A 475 DLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMW 553 (781)
T ss_dssp ESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEE
T ss_pred eCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEE
Confidence 98776544332222 35789999998887544 5553347778876543322111 123568888888888765
Q ss_pred EEEeCCCcEEEee
Q 021247 301 VSVSDDKSISLYE 313 (315)
Q Consensus 301 ~s~~~d~~i~i~~ 313 (315)
++.. +|.|..||
T Consensus 554 i~T~-~Glv~~~d 565 (781)
T 3v9f_A 554 LATG-EGLVCFPS 565 (781)
T ss_dssp EEET-TEEEEESC
T ss_pred EEEC-CCceEEEC
Confidence 5544 55535554
No 277
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.73 E-value=2.8e-05 Score=66.90 Aligned_cols=239 Identities=9% Similarity=0.052 Sum_probs=137.9
Q ss_pred ceEEEEEee-cCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeC-CC----eEEEEEC
Q 021247 16 SVWAVTWVP-ATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASL-DS----FVRVFDV 89 (315)
Q Consensus 16 ~v~~v~~~~-~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~-d~----~i~~w~~ 89 (315)
....|++.| ... .|+.+...+.|+.++++...+..... .......++++++|..|..+.. ++ .+...+.
T Consensus 138 ~P~~lavdp~~~g----~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHN----HLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEETTEEE----EEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEECCCCCC----eEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC
Confidence 557788886 232 35655555889999987765544333 3446789999999995554443 22 3444443
Q ss_pred CCCce-eEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECC
Q 021247 90 DTNAS-IATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP 168 (315)
Q Consensus 90 ~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 168 (315)
..... ...+.. ......++++|++..++++-..++.|..+|.............. ......++|+|
T Consensus 213 ~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~------------~~~P~gia~~p 279 (430)
T 3tc9_A 213 ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD------------SGWEFHIQFHP 279 (430)
T ss_dssp GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS------------SSCCEEEEECT
T ss_pred CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC------------CCcceeEEEcC
Confidence 32211 122221 23345778999555577777778899999987654322221111 12356899999
Q ss_pred CCCEE-EEecCCCcEEEEEccc--cee--eeeecC---------------CccceE-EEEEcC-------CCCcEEEEEe
Q 021247 169 DGRRI-ACGSMDGTISVFDVTR--AKF--LHHLEG---------------HFMPVR-SLVYSP-------VDPRVLFSAS 220 (315)
Q Consensus 169 ~~~~l-~~~s~dg~i~i~d~~~--~~~--~~~~~~---------------~~~~v~-~~~~~~-------~~~~~l~s~~ 220 (315)
+|++| ++-...+.|..++... ++. ...+.+ ...... .+...+ .++.++++-.
T Consensus 280 dG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~ 359 (430)
T 3tc9_A 280 SGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDR 359 (430)
T ss_dssp TSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEG
T ss_pred CCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEEC
Confidence 99954 5566788899988653 221 111111 011123 344432 1345566656
Q ss_pred CCCeEEEEeCCCCeeEEEeec-----------------ccccEEEEEEcC-CCCeEEEEeCCCcEEEEecC
Q 021247 221 DDTHVHMYDAEGKSLVTAMSG-----------------HASWVLSVDASP-DGAAITTGSSDRTVKLWDLN 273 (315)
Q Consensus 221 ~d~~i~~wd~~~~~~~~~~~~-----------------~~~~i~~~~~~~-~~~~l~s~~~d~~i~iwd~~ 273 (315)
..+.|+.++.. +.+...... .-.....++++| ++.++++-..+++|+.++++
T Consensus 360 ~n~~I~~i~~~-G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 360 ENHCIRILTPQ-GRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp GGTEEEEECTT-SEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCcEEEEECCC-CcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 67888888854 333222211 012578999999 46666666667788887653
No 278
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.73 E-value=0.00017 Score=67.08 Aligned_cols=280 Identities=13% Similarity=0.096 Sum_probs=161.4
Q ss_pred cceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccc-------cccceEEEEeCCCCCEEEEeeCCCeEEEE
Q 021247 15 ESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTG-------HCLGVVSVAAHPSGIIAASASLDSFVRVF 87 (315)
Q Consensus 15 ~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~-------h~~~v~~~~~~~~g~~l~s~~~d~~i~~w 87 (315)
..|.++...+.+ .|..|..+ -+.+|+..+.+....... ....|.++...++|.+.+ |...+-|.++
T Consensus 211 ~~i~~i~~d~~g-----~lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~ 283 (781)
T 3v9f_A 211 NDVRCIYKDTNG-----NIWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWI-ATELNGIMIL 283 (781)
T ss_dssp SSEEEEEECTTC-----CEEEEETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEE-EESSSCEEEE
T ss_pred CceeEEEEcCCC-----CEEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEE-EeCCCCeEEE
Confidence 356666544333 35666655 688898766554332111 234689999988887655 4554568888
Q ss_pred ECCCCceeEEee--------------CCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCc
Q 021247 88 DVDTNASIATLE--------------ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTD 153 (315)
Q Consensus 88 ~~~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 153 (315)
+..+........ .....|.++..++++..- .|..++-|..++........ +....... . .
T Consensus 284 ~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lW--igt~~~Gl~~~~~~~~~~~~-~~~~~~~~-~--~ 357 (781)
T 3v9f_A 284 DLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIW--IGTWGGGINFISNAPPTFHT-WSYSPTQM-N--E 357 (781)
T ss_dssp ETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEE--EEEBSSCEEEECSSCCSCEE-EC----CC-C--S
T ss_pred CCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEE--EEecCCeEEEeCCCCCccee-eccCcccc-c--c
Confidence 987654321111 123568899888887743 34556778888876543222 21100000 0 0
Q ss_pred cCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeee---cCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeC
Q 021247 154 KSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHL---EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA 230 (315)
Q Consensus 154 ~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~ 230 (315)
.......|.++...++|+ |..|+.++.+..||..+++..... ......|.++...+ ++. |..|+.++-|..+|.
T Consensus 358 ~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~-lWigt~~~Gl~~~~~ 434 (781)
T 3v9f_A 358 SSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDS-EGN-LWFGTYLGNISYYNT 434 (781)
T ss_dssp SCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECT-TSC-EEEEETTEEEEEECS
T ss_pred CCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECC-CCC-EEEEeccCCEEEEcC
Confidence 011234588898888765 556666677999998765432211 12335688887765 344 455677677999998
Q ss_pred CCCeeEEEee--cccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccc-----cccceEEEEEeeCCCEEEEE
Q 021247 231 EGKSLVTAMS--GHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN-----HTDQVWGVSFRPLGGRVVSV 303 (315)
Q Consensus 231 ~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~s~ 303 (315)
++++...... .....|.++..++++.+ ..|+. +-+..+|..+++....... ....|.++...++|...++.
T Consensus 435 ~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-wigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 512 (781)
T 3v9f_A 435 RLKKFQIIELEKNELLDVRVFYEDKNKKI-WIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGT 512 (781)
T ss_dssp SSCEEEECCSTTTCCCCEEEEEECTTSEE-EEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEE
T ss_pred CCCcEEEeccCCCCCCeEEEEEECCCCCE-EEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEE
Confidence 7765443221 13457889988888764 44555 4588898876543221111 13578889888888765554
Q ss_pred eCCCcEEEee
Q 021247 304 SDDKSISLYE 313 (315)
Q Consensus 304 ~~d~~i~i~~ 313 (315)
..+| +..|+
T Consensus 513 ~~~G-l~~~~ 521 (781)
T 3v9f_A 513 FGGG-VGIYT 521 (781)
T ss_dssp SSSC-EEEEC
T ss_pred cCCC-EEEEe
Confidence 4344 44444
No 279
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.68 E-value=1.2e-06 Score=79.88 Aligned_cols=236 Identities=17% Similarity=0.163 Sum_probs=128.8
Q ss_pred EEEeCC-CCCEEEEeeCCC-----------eEEEEECCCCcee--EEeeC-CcccEEEEEECCCCCeEEEEec-CCCeEE
Q 021247 65 SVAAHP-SGIIAASASLDS-----------FVRVFDVDTNASI--ATLEA-SPSEVWQMQFDPKGTTLAVAGG-GSASVK 128 (315)
Q Consensus 65 ~~~~~~-~g~~l~s~~~d~-----------~i~~w~~~~~~~~--~~~~~-~~~~v~~~~~~~~~~~~~~~~~-~d~~i~ 128 (315)
..++.+ +|++++.|+.+. .+.+||+.+++.. ..... +......+++.+++..+ +.|+ .+..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~ly-v~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIV-VTGGNDAKKTS 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEE-EECSSSTTCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEE-EeCCCCCCceE
Confidence 345556 788888887653 5889999887532 22211 22223345666777754 4555 556899
Q ss_pred EEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEec-CC-----CcEEEEEcccceeeeeecCCccc
Q 021247 129 LWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS-MD-----GTISVFDVTRAKFLHHLEGHFMP 202 (315)
Q Consensus 129 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s-~d-----g~i~i~d~~~~~~~~~~~~~~~~ 202 (315)
+||..+.+....-.++. ...-.+++..++++.++.|+ .+ ..+.+||+.+++....-.....+
T Consensus 269 ~yd~~t~~W~~~~~~~~------------~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p 336 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQV------------ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNP 336 (656)
T ss_dssp EEEGGGTEEEECCCCSS------------CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGG
T ss_pred EecCcCCceeECCCCCc------------cccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccc
Confidence 99988765443211111 01123556667889888887 34 46999999877654320000000
Q ss_pred eE----EEEEcCCCCcEEEEEeCC---------CeEEEEeCCCCeeEEEeecccc---------cEEEEEEcC-CCCeEE
Q 021247 203 VR----SLVYSPVDPRVLFSASDD---------THVHMYDAEGKSLVTAMSGHAS---------WVLSVDASP-DGAAIT 259 (315)
Q Consensus 203 v~----~~~~~~~~~~~l~s~~~d---------~~i~~wd~~~~~~~~~~~~~~~---------~i~~~~~~~-~~~~l~ 259 (315)
.. ...+. .++++++.++.+ ..+..||.+...-......+.. .-.++.+.. ++++++
T Consensus 337 ~~~~~~~~~~~-~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v 415 (656)
T 1k3i_A 337 MLTADKQGLYR-SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILT 415 (656)
T ss_dssp GCCCCTTGGGT-TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEE
T ss_pred cccccccceee-cCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEE
Confidence 00 00011 134444555443 3567888876543332222211 123344433 677888
Q ss_pred EEeCCC-----------cEEEEecCccceehcc--cccccc-eEEEEEeeCCCEEEEEeCC-----------CcEEEeec
Q 021247 260 TGSSDR-----------TVKLWDLNMRAAMQSM--TNHTDQ-VWGVSFRPLGGRVVSVSDD-----------KSISLYEY 314 (315)
Q Consensus 260 s~~~d~-----------~i~iwd~~~~~~~~~~--~~~~~~-v~~~~~s~~~~~l~s~~~d-----------~~i~i~~~ 314 (315)
.|+.++ .|.+||..+..-.... ..+... -.+++..|+|+.++.+|.+ ..+.+||.
T Consensus 416 ~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp 495 (656)
T 1k3i_A 416 FGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVP 495 (656)
T ss_dssp ECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEG
T ss_pred EeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcC
Confidence 888543 5778887654322111 111222 2345667899999998865 46788875
No 280
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.68 E-value=5.2e-05 Score=65.30 Aligned_cols=235 Identities=11% Similarity=0.062 Sum_probs=140.8
Q ss_pred ceEEEEeCCC---CCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCC---Ce-EEEEecCC
Q 021247 62 GVVSVAAHPS---GIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGS---AS-VKLWDTAT 134 (315)
Q Consensus 62 ~v~~~~~~~~---g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d---~~-i~~~d~~~ 134 (315)
....++++|+ |.++++-.. +.|+.++..++.... +.........++++++++ ++++.... .. +...+...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGG
T ss_pred CCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEE-eecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCC
Confidence 3568889984 665555433 889999987765543 333445688999999998 65654321 11 22222211
Q ss_pred cceeeeecCCCCCCCCCCccCCCCcceEEEEECC-CCCEEEEecCCCcEEEEEcccceeeeee-c-CCccceEEEEEcCC
Q 021247 135 WNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP-DGRRIACGSMDGTISVFDVTRAKFLHHL-E-GHFMPVRSLVYSPV 211 (315)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~s~dg~i~i~d~~~~~~~~~~-~-~~~~~v~~~~~~~~ 211 (315)
........ ..-.....++++| ++++.++-..++.|+.+|..++.....+ . +.......++|+|.
T Consensus 217 -~~~~~~~~------------~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpd 283 (433)
T 4hw6_A 217 -GFTERLSL------------CNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPT 283 (433)
T ss_dssp -TTCCEEEE------------EECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTT
T ss_pred -Ceeccccc------------cccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCC
Confidence 11000000 0011245688999 6776677777889999998766552222 1 11122346999996
Q ss_pred CCcEEEEEeCCCeEEEEeCC--CCee--EEEeec---------------ccccEEEEEE---------cCCCCeEEEEeC
Q 021247 212 DPRVLFSASDDTHVHMYDAE--GKSL--VTAMSG---------------HASWVLSVDA---------SPDGAAITTGSS 263 (315)
Q Consensus 212 ~~~~l~s~~~d~~i~~wd~~--~~~~--~~~~~~---------------~~~~i~~~~~---------~~~~~~l~s~~~ 263 (315)
+..++++-...+.|+.++.. ++.+ ...+.+ .-.....+++ .+++.+.++-..
T Consensus 284 G~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~ 363 (433)
T 4hw6_A 284 GDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRD 363 (433)
T ss_dssp SSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECC
Confidence 55577777778899998754 2221 111111 1234677898 777877777777
Q ss_pred CCcEEEEecCccceehcccc------------------cccceEEEEEe-eCCCEEEEEeCCCcEEEeec
Q 021247 264 DRTVKLWDLNMRAAMQSMTN------------------HTDQVWGVSFR-PLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 264 d~~i~iwd~~~~~~~~~~~~------------------~~~~v~~~~~s-~~~~~l~s~~~d~~i~i~~~ 314 (315)
++.|+.++.. +.. .++.+ .-....+++++ ++|..+++=....+|+.+++
T Consensus 364 n~~I~~~~~~-G~v-~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 364 SHTVRVLTPE-GRV-TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp TTEEEEECTT-SEE-EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CCEEEEECCC-CCE-EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 8889999853 322 22211 11347899999 66666666666788888775
No 281
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.64 E-value=8.2e-05 Score=58.82 Aligned_cols=206 Identities=11% Similarity=0.121 Sum_probs=132.3
Q ss_pred eccccccceEEEEeCCCCC-EEEEeeCCCeEEEEECCCCceeEEeeCC-cccEEEEEECCCCCeEEEEecCCCeEEEEec
Q 021247 55 TNTGHCLGVVSVAAHPSGI-IAASASLDSFVRVFDVDTNASIATLEAS-PSEVWQMQFDPKGTTLAVAGGGSASVKLWDT 132 (315)
Q Consensus 55 ~~~~h~~~v~~~~~~~~g~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~ 132 (315)
.+++-...+..++++|++. +++....++.|...|.. ++.+..+... ......+++.+++. ++++...++.+.++++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~-~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQ-FVISDERDYAIYVISL 98 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTE-EEEEETTTTEEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCE-EEEEECCCCcEEEEEc
Confidence 4555556789999999765 55557778889999987 7766666432 24677888888775 5556667788999987
Q ss_pred CCccee---eeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcc---cceeeeee-------cCC
Q 021247 133 ATWNLI---ATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT---RAKFLHHL-------EGH 199 (315)
Q Consensus 133 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~---~~~~~~~~-------~~~ 199 (315)
.....+ ....++.. ....+.-...++|+|.++.|.++.+.....+|.+. ....+..+ ..+
T Consensus 99 ~~~~~i~~~~~~~~~~~-------~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~ 171 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQ-------ESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFT 171 (255)
T ss_dssp CTTCCEEEEEEEECCCS-------SCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCC
T ss_pred CCCCeeeeeeeeccccc-------cccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccc
Confidence 654322 22221100 01123337899999998877766655444444442 11111111 112
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEee---cc------cccEEEEEEcCCCCeEEEEeCCCcEEEE
Q 021247 200 FMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS---GH------ASWVLSVDASPDGAAITTGSSDRTVKLW 270 (315)
Q Consensus 200 ~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~---~~------~~~i~~~~~~~~~~~l~s~~~d~~i~iw 270 (315)
.....+++++|..+++++.+...+.|.++|.++. .+..+. +. -...-.|+++++|++.++ +.-+.++.|
T Consensus 172 ~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f 249 (255)
T 3qqz_A 172 LDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRF 249 (255)
T ss_dssp SSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEE
T ss_pred cCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEE
Confidence 3356789999988888888888999999998865 444432 11 125678999999985554 666656555
Q ss_pred e
Q 021247 271 D 271 (315)
Q Consensus 271 d 271 (315)
.
T Consensus 250 ~ 250 (255)
T 3qqz_A 250 T 250 (255)
T ss_dssp E
T ss_pred E
Confidence 3
No 282
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.63 E-value=7.4e-05 Score=64.33 Aligned_cols=240 Identities=12% Similarity=0.104 Sum_probs=140.1
Q ss_pred ceEEEEEeec-CCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCC---C-eEEEEECC
Q 021247 16 SVWAVTWVPA-TETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLD---S-FVRVFDVD 90 (315)
Q Consensus 16 ~v~~v~~~~~-~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d---~-~i~~w~~~ 90 (315)
...+|+|.|. .. ..|+.+...+.|+.+++.+..+.... ........++++++|.++++-... . .+...+..
T Consensus 140 ~P~gvavd~~s~~---g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 140 NIWRMMFDPNSNY---DDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCCEEEECTTTTT---CEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGG
T ss_pred CCceEEEccccCC---CEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECC
Confidence 4678888874 11 13555544488999998766654443 234458899999999965554321 1 13333322
Q ss_pred CCce-eEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCC
Q 021247 91 TNAS-IATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169 (315)
Q Consensus 91 ~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 169 (315)
.+.. ...+. .......++++|.+..++++-..++.|+.+|..++.....+..... ......++|+|+
T Consensus 216 ~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~-----------~~~~~~ia~dpd 283 (433)
T 4hw6_A 216 SGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT-----------KGSNFHIVWHPT 283 (433)
T ss_dssp GTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC-----------CSSCEEEEECTT
T ss_pred CCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC-----------CCCcccEEEeCC
Confidence 2211 01111 1233456788994455666666778999999876655222211000 011246999999
Q ss_pred CCEE-EEecCCCcEEEEEcc--cceee--eeecC---------------CccceEEEEEc--------CCCCcEEEEEeC
Q 021247 170 GRRI-ACGSMDGTISVFDVT--RAKFL--HHLEG---------------HFMPVRSLVYS--------PVDPRVLFSASD 221 (315)
Q Consensus 170 ~~~l-~~~s~dg~i~i~d~~--~~~~~--~~~~~---------------~~~~v~~~~~~--------~~~~~~l~s~~~ 221 (315)
+++| ++-...+.|+.+++. ++... ..+.+ .......+++. ..++.++++-..
T Consensus 284 G~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~ 363 (433)
T 4hw6_A 284 GDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRD 363 (433)
T ss_dssp SSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECC
Confidence 9854 556677899998864 22211 11111 12235678882 235667777777
Q ss_pred CCeEEEEeCCCCeeEEEeecc------------------cccEEEEEEc-CCCCeEEEEeCCCcEEEEecC
Q 021247 222 DTHVHMYDAEGKSLVTAMSGH------------------ASWVLSVDAS-PDGAAITTGSSDRTVKLWDLN 273 (315)
Q Consensus 222 d~~i~~wd~~~~~~~~~~~~~------------------~~~i~~~~~~-~~~~~l~s~~~d~~i~iwd~~ 273 (315)
.+.|+.++.. +.+. .+.+. -.....|+++ +++.++++-..+++|+.++++
T Consensus 364 n~~I~~~~~~-G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 364 SHTVRVLTPE-GRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTEEEEECTT-SEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCEEEEECCC-CCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 8899999864 3332 22211 1347789999 677776766677788887754
No 283
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.63 E-value=0.00026 Score=63.82 Aligned_cols=223 Identities=9% Similarity=-0.041 Sum_probs=143.7
Q ss_pred CCCcEEEEcCCCCcceeecc-ccccceEEEEeCCC-CCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCC
Q 021247 38 LDETVKLWRPDDMQLERTNT-GHCLGVVSVAAHPS-GIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGT 115 (315)
Q Consensus 38 ~d~~v~~w~~~~~~~~~~~~-~h~~~v~~~~~~~~-g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 115 (315)
....|+..+++.......++ ..-..+..+++++. +.++++-..++.|+.+++........+.........+++++.+.
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK 92 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCC
Confidence 56788888887654333222 12245778999985 45566666788999999876544444443334566888888878
Q ss_pred eEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEE-EEe-cCCCcEEEEEcccceee
Q 021247 116 TLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI-ACG-SMDGTISVFDVTRAKFL 193 (315)
Q Consensus 116 ~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~-s~dg~i~i~d~~~~~~~ 193 (315)
.++++-...+.|.+.++........+. ..-.....++++|....| .+- +..+.|...++......
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~~~~l~~-------------~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~ 159 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQHRQVLVW-------------KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT 159 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTTCEEEEC-------------SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred EEEEEECCCCEEEEEecCCCcEEEEEe-------------CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE
Confidence 788887778899999986533211110 011225799999854444 443 23567888887543322
Q ss_pred eeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecC
Q 021247 194 HHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLN 273 (315)
Q Consensus 194 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~ 273 (315)
... ........+++.+.+++++++-...+.|..+|+.+... ..+........++++.. +.++++-...+.|...|..
T Consensus 160 ~l~-~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~ 236 (628)
T 4a0p_A 160 TLV-PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKT 236 (628)
T ss_dssp EEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred EEE-CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECC
Confidence 222 23446789999987777777777888999999876543 23333344566788775 4566666668888888866
Q ss_pred ccc
Q 021247 274 MRA 276 (315)
Q Consensus 274 ~~~ 276 (315)
+++
T Consensus 237 tg~ 239 (628)
T 4a0p_A 237 SGQ 239 (628)
T ss_dssp TCC
T ss_pred CCC
Confidence 554
No 284
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.63 E-value=3.7e-07 Score=83.50 Aligned_cols=229 Identities=9% Similarity=-0.009 Sum_probs=133.8
Q ss_pred CCcEEEEcCCCCcceeeccccccceEEEEeCCCCC-EEEEeeCCCeEEEEECCC----CceeEEeeCCcccEEEEEECCC
Q 021247 39 DETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGI-IAASASLDSFVRVFDVDT----NASIATLEASPSEVWQMQFDPK 113 (315)
Q Consensus 39 d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~-~l~s~~~d~~i~~w~~~~----~~~~~~~~~~~~~v~~~~~~~~ 113 (315)
.+.|+..+.+..+....... ...+..+++++.+. ++++-...+.|+.+++.. ......+.........+++++.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 35677777765544333322 22456778887554 455555667899999875 2222222212223456788866
Q ss_pred CCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEE-EEecC-CCcEEEEEcccce
Q 021247 114 GTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI-ACGSM-DGTISVFDVTRAK 191 (315)
Q Consensus 114 ~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~s~-dg~i~i~d~~~~~ 191 (315)
+..++++-...+.|.++++........+... ......++++|.+.+| ++-.. .+.|..+++....
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~-------------~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~ 530 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQ-------------GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 530 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCS-------------SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCC-------------CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC
Confidence 6667776666788999988654322221100 0124578888865544 44333 3678888775332
Q ss_pred eeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEee--cccccEEEEEEcCCCCeEEEEeCCCcEEE
Q 021247 192 FLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS--GHASWVLSVDASPDGAAITTGSSDRTVKL 269 (315)
Q Consensus 192 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~s~~~d~~i~i 269 (315)
....+.......+.|+|+|.+++++++-...+.|.++++.+......+. ........+++..+ .++++....+.|..
T Consensus 531 ~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~ 609 (699)
T 1n7d_A 531 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFS 609 (699)
T ss_dssp CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEE
T ss_pred eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEE
Confidence 2111122233457899998778888888888999999987643333222 12233445666654 56667777889999
Q ss_pred EecCccceehccc
Q 021247 270 WDLNMRAAMQSMT 282 (315)
Q Consensus 270 wd~~~~~~~~~~~ 282 (315)
++..+++.+..+.
T Consensus 610 ~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 610 ANRLTGSDVNLLA 622 (699)
T ss_dssp EETTTEEEEECCC
T ss_pred EEccCCCceEEee
Confidence 9987776665553
No 285
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.60 E-value=0.00018 Score=66.43 Aligned_cols=218 Identities=11% Similarity=0.038 Sum_probs=133.7
Q ss_pred CCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcce----eeeecCCCCCCCCCCccC
Q 021247 80 LDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNL----IATLSIPRPEGLKPTDKS 155 (315)
Q Consensus 80 ~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~----~~~~~~~~~~~~~~~~~~ 155 (315)
....|+..++........+. ....+..++|++.+..++++-...+.|+.+++..... ...+.
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~------------- 467 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS------------- 467 (791)
T ss_dssp CBSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC-------------
T ss_pred cccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe-------------
Confidence 34568888887655433333 4456778999997777888877788898888764211 11110
Q ss_pred CCCcceEEEEECCCCC-EEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCC-CeEEEEeCCCC
Q 021247 156 SSKKFVLSVAWSPDGR-RIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD-THVHMYDAEGK 233 (315)
Q Consensus 156 ~~~~~i~~~~~~~~~~-~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-~~i~~wd~~~~ 233 (315)
........|++.+.++ ++++-...+.|.+.++........+.......+.|++.|..+.++++-... +.|.+.++.+.
T Consensus 468 ~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~ 547 (791)
T 3m0c_C 468 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 547 (791)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred cCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC
Confidence 0112245889988765 455667788999999875443333333445678999998777777766444 78999998876
Q ss_pred eeEEEeecccccEEEEEEcCCCCeE-EEEeCCCcEEEEecCccceehcccc--cccceEEEEEeeCCCEEE-EEeCCCcE
Q 021247 234 SLVTAMSGHASWVLSVDASPDGAAI-TTGSSDRTVKLWDLNMRAAMQSMTN--HTDQVWGVSFRPLGGRVV-SVSDDKSI 309 (315)
Q Consensus 234 ~~~~~~~~~~~~i~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~-s~~~d~~i 309 (315)
...........+...|++++.+..| ++-...++|...+++.......+.. .-....+|++. +.+|+ +-...+.|
T Consensus 548 ~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I 625 (791)
T 3m0c_C 548 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAI 625 (791)
T ss_dssp CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEE
T ss_pred ceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEE
Confidence 5544444445678999999765555 4445567899998864332222222 12234566653 33454 33344555
Q ss_pred EEee
Q 021247 310 SLYE 313 (315)
Q Consensus 310 ~i~~ 313 (315)
...+
T Consensus 626 ~~~d 629 (791)
T 3m0c_C 626 FSAN 629 (791)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5543
No 286
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.60 E-value=0.00015 Score=59.35 Aligned_cols=235 Identities=12% Similarity=-0.020 Sum_probs=132.8
Q ss_pred cceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCC-C-eEEEEECCCC
Q 021247 15 ESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLD-S-FVRVFDVDTN 92 (315)
Q Consensus 15 ~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d-~-~i~~w~~~~~ 92 (315)
....+++|.|.+. ++++-..++.|..|+.+.. ...... -...+..+.+.++|+++++.... + .|..++..++
T Consensus 32 ~~pegia~~~~g~----lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 32 TFLENLASAPDGT----IFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG 105 (306)
T ss_dssp CCEEEEEECTTSC----EEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS
T ss_pred CCcceEEECCCCC----EEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCC
Confidence 3566788877543 5555557889999988653 222221 12357889999999977765433 2 4666776666
Q ss_pred ceeEEeeCC-cccEEEEEECCCCCeEEEEecCCCeEEEEecCCcce-eeeecCCCCCCCCCCccCCCCcceEEEEECCCC
Q 021247 93 ASIATLEAS-PSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNL-IATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDG 170 (315)
Q Consensus 93 ~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 170 (315)
+........ ......++..+. ..++++...++.|.++|...++. +.... +. .........-.....+ ++++
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~~~-~~~~v~d~~~g~i~~~d~~~~~~~v~~~~-~~---~~~~~~~~~~~~pngi--s~dg 178 (306)
T 2p4o_A 106 TVETLLTLPDAIFLNGITPLSD-TQYLTADSYRGAIWLIDVVQPSGSIWLEH-PM---LARSNSESVFPAANGL--KRFG 178 (306)
T ss_dssp CEEEEEECTTCSCEEEEEESSS-SEEEEEETTTTEEEEEETTTTEEEEEEEC-GG---GSCSSTTCCSCSEEEE--EEET
T ss_pred eEEEEEeCCCccccCcccccCC-CcEEEEECCCCeEEEEeCCCCcEeEEEEC-Cc---cccccccCCCCcCCCc--CcCC
Confidence 543322221 122344444443 44555555678899998765321 11110 00 0000000011124455 7777
Q ss_pred CEE-EEecCCCcEEEEEccc-cee--eeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEE--Eeecccc
Q 021247 171 RRI-ACGSMDGTISVFDVTR-AKF--LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVT--AMSGHAS 244 (315)
Q Consensus 171 ~~l-~~~s~dg~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~--~~~~~~~ 244 (315)
+.| ++-+..+.|..+|+.. ++. ...+. .......+++.+ +++++++....+.|.++|..+ +... .+.....
T Consensus 179 ~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~-dG~l~va~~~~~~V~~~~~~G-~~~~~~~~~~~~~ 255 (306)
T 2p4o_A 179 NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDV-EGNLYGATHIYNSVVRIAPDR-STTIIAQAEQGVI 255 (306)
T ss_dssp TEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBT-TCCEEEECBTTCCEEEECTTC-CEEEEECGGGTCT
T ss_pred CEEEEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECC-CCCEEEEeCCCCeEEEECCCC-CEEEEeecccccC
Confidence 655 5556778999999864 321 11111 112345677887 567777777788999999864 3322 2222335
Q ss_pred cEEEEEEc---CCCCeEEEEeCCC
Q 021247 245 WVLSVDAS---PDGAAITTGSSDR 265 (315)
Q Consensus 245 ~i~~~~~~---~~~~~l~s~~~d~ 265 (315)
.+.+++|. |++..|+.+...+
T Consensus 256 ~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 256 GSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp TEEEEEECCSTTTTTEEEEEECTT
T ss_pred CceEEEEecccCCCCEEEEECCCC
Confidence 68899998 7877666555443
No 287
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.56 E-value=1.8e-05 Score=73.20 Aligned_cols=195 Identities=10% Similarity=0.070 Sum_probs=109.7
Q ss_pred cEEEEEEC-CCCCeEEEEecCC----CeEEEEecCCc-ceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEec
Q 021247 104 EVWQMQFD-PKGTTLAVAGGGS----ASVKLWDTATW-NLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS 177 (315)
Q Consensus 104 ~v~~~~~~-~~~~~~~~~~~~d----~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s 177 (315)
.+...+|+ |+|+.++++...+ .+|+++|+.++ +.+.. . -......++|+|||+.|+...
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-----~----------~~~~~~~~~WspDg~~l~y~~ 239 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-----K----------VSGTNGEIVWGPDHTSLFYVT 239 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-----C----------EEEECSCCEECSSTTEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-----c----------ccCceeeEEEecCCCEEEEEE
Confidence 56788999 9999887765443 35999999876 42210 0 001134688999998887766
Q ss_pred CC-----CcEEEEEcccceee--eeec-CCccceEEEEEcCCCCcEEEEEeC--CCeEEEEeCCCC--ee--EEEeeccc
Q 021247 178 MD-----GTISVFDVTRAKFL--HHLE-GHFMPVRSLVYSPVDPRVLFSASD--DTHVHMYDAEGK--SL--VTAMSGHA 243 (315)
Q Consensus 178 ~d-----g~i~i~d~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~~l~s~~~--d~~i~~wd~~~~--~~--~~~~~~~~ 243 (315)
.+ ..|+.+++.++... ..+. ........+.|+|++..++++... ...|+++|+.++ .. ........
T Consensus 240 ~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~ 319 (751)
T 2xe4_A 240 KDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREK 319 (751)
T ss_dssp ECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCT
T ss_pred ECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCC
Confidence 54 35888888765321 1111 222345678899955444444433 346888898764 22 22223334
Q ss_pred ccEEEEEEcCCCCeEEEEeCC----CcEEEEecCccceehc-ccccccceEEEEEeeCCCEE-EEEeCCCcEEEee
Q 021247 244 SWVLSVDASPDGAAITTGSSD----RTVKLWDLNMRAAMQS-MTNHTDQVWGVSFRPLGGRV-VSVSDDKSISLYE 313 (315)
Q Consensus 244 ~~i~~~~~~~~~~~l~s~~~d----~~i~iwd~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l-~s~~~d~~i~i~~ 313 (315)
....++.|+.++.+++....+ ..|..+++.....+.. +..+...+.--.+++.+..| ++...++..+||-
T Consensus 320 ~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 320 GVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp TCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEE
T ss_pred CceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEE
Confidence 445556655444455555443 2566667654222333 33343332222344445554 5777778666653
No 288
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.55 E-value=0.00012 Score=65.96 Aligned_cols=227 Identities=9% Similarity=0.017 Sum_probs=133.3
Q ss_pred CCCcEEEEcCCCCcc-eeeccccccceEEEEeCCCC-CEEEEeeCCCeEEEEECCCCce-eEEeeCCcccEEEEEECCCC
Q 021247 38 LDETVKLWRPDDMQL-ERTNTGHCLGVVSVAAHPSG-IIAASASLDSFVRVFDVDTNAS-IATLEASPSEVWQMQFDPKG 114 (315)
Q Consensus 38 ~d~~v~~w~~~~~~~-~~~~~~h~~~v~~~~~~~~g-~~l~s~~~d~~i~~w~~~~~~~-~~~~~~~~~~v~~~~~~~~~ 114 (315)
....|+..+.+.... .......-..+..+++++.+ .++++-...+.|+.++++.... ...+.........+++++.+
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~ 95 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 95 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTT
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecC
Confidence 356788888765421 11122223457788998855 4555655678899999876532 22333333567899999988
Q ss_pred CeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEE-EEe-cCCCcEEEEEccccee
Q 021247 115 TTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI-ACG-SMDGTISVFDVTRAKF 192 (315)
Q Consensus 115 ~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~-s~dg~i~i~d~~~~~~ 192 (315)
..++++-...+.|.+.++...... .+... .-.....+++.|.+..| ++- +..+.|...++.....
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~~-~l~~~------------~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~ 162 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLRK-VLFWQ------------ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR 162 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCE-EEECS------------SCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CEEEEEeCCCCEEEEEECCCCCEE-EEEeC------------CCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce
Confidence 888888888899999998753322 22100 01124578998865544 443 2346777777653322
Q ss_pred eeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEec
Q 021247 193 LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDL 272 (315)
Q Consensus 193 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~ 272 (315)
.............+++.+.+++++++-...+.|..+|..+........+......++++.++ .+.++-..++.|...|.
T Consensus 163 ~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~ 241 (619)
T 3s94_A 163 FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNK 241 (619)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEES
T ss_pred EEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEEC
Confidence 22222233456889999877777777777889999998765433322222223346777655 55566667788988888
Q ss_pred Ccccee
Q 021247 273 NMRAAM 278 (315)
Q Consensus 273 ~~~~~~ 278 (315)
.+++..
T Consensus 242 ~tg~~~ 247 (619)
T 3s94_A 242 YTGEGL 247 (619)
T ss_dssp SSCCCC
T ss_pred CCCccc
Confidence 766543
No 289
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.55 E-value=0.0004 Score=62.68 Aligned_cols=218 Identities=9% Similarity=0.027 Sum_probs=137.5
Q ss_pred CCCeEEEEECCCCceeEEeeC-CcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCC
Q 021247 80 LDSFVRVFDVDTNASIATLEA-SPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSK 158 (315)
Q Consensus 80 ~d~~i~~w~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (315)
....|+..++++......+.. .......++|++.+..++++-..++.|..+++........+... .
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g-------------~ 79 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFG-------------L 79 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS-------------C
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCC-------------C
Confidence 456799999987654333322 23467799999988888888778899999988654332222110 1
Q ss_pred cceEEEEECCCCC-EEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEE-eCCCeEEEEeCCCCeeE
Q 021247 159 KFVLSVAWSPDGR-RIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSA-SDDTHVHMYDAEGKSLV 236 (315)
Q Consensus 159 ~~i~~~~~~~~~~-~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-~~d~~i~~wd~~~~~~~ 236 (315)
.....+++.+.++ ..++-...+.|.+.++................+.+++.|..+.++++- +..+.|...++.+....
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~ 159 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT 159 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE
Confidence 1245788887655 446666778999999864432222223344578999998777666665 33678888888765433
Q ss_pred EEeecccccEEEEEEcCCCCeE-EEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEee
Q 021247 237 TAMSGHASWVLSVDASPDGAAI-TTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313 (315)
Q Consensus 237 ~~~~~~~~~i~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 313 (315)
... ....+...+++++++..| ++-...+.|...+++.... +.+........++++.. +...++-...+.|...|
T Consensus 160 ~l~-~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 160 TLV-PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERAN 234 (628)
T ss_dssp EEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred EEE-CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEE
Confidence 322 345678899999975555 5555667899999875332 23333334556777754 33334444456666654
No 290
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.52 E-value=0.00035 Score=60.60 Aligned_cols=236 Identities=11% Similarity=0.038 Sum_probs=140.7
Q ss_pred eEEEEeCCC--CCEEEEeeCCCeEEEEECCCCceeEEeeCC---cccEEEEEE-------CCCCCeEEEEecCCC-----
Q 021247 63 VVSVAAHPS--GIIAASASLDSFVRVFDVDTNASIATLEAS---PSEVWQMQF-------DPKGTTLAVAGGGSA----- 125 (315)
Q Consensus 63 v~~~~~~~~--g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~~~~~~~~d~----- 125 (315)
...|+++|. ++++++-...+.|++.|+.++......... ......++| ++++..++++...++
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 567889983 556666665577999998887665444332 235789999 999987776654442
Q ss_pred -eEEEEecCC-ccee-----eeecCCCCCCCCCCccCCCCcceEEEEECCC-CCEEEEecCCCcEEEEEcc-------cc
Q 021247 126 -SVKLWDTAT-WNLI-----ATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD-GRRIACGSMDGTISVFDVT-------RA 190 (315)
Q Consensus 126 -~i~~~d~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~s~dg~i~i~d~~-------~~ 190 (315)
.|.+++... ++.. ..+. .-.....++++|+ +.++++-..++.|..+|+. ++
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~--------------~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg 286 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIA--------------AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNG 286 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEE--------------EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTT
T ss_pred ceEEEEecCCCCceeecccceeec--------------cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCc
Confidence 245554222 1111 0000 0012357888994 5556677788899999987 44
Q ss_pred ee-----------eeee-c-CCccceEEEEEcCCCCcEEEEEeCCCeEEEEeC--CCCee--EEEeecc-----------
Q 021247 191 KF-----------LHHL-E-GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA--EGKSL--VTAMSGH----------- 242 (315)
Q Consensus 191 ~~-----------~~~~-~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~--~~~~~--~~~~~~~----------- 242 (315)
.. ...+ . ......+.++|+|.+..++++-...+.|+.++. ..+.+ ...+.+.
T Consensus 287 ~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~ 366 (496)
T 3kya_A 287 GSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVG 366 (496)
T ss_dssp CCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBG
T ss_pred eeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcc
Confidence 43 1111 1 122345789999955446677777889998654 33322 0111111
Q ss_pred ----cccEE-EEEEc-------CCCCeEEEEeCCCcEEEEecCccceehccccc------------------------cc
Q 021247 243 ----ASWVL-SVDAS-------PDGAAITTGSSDRTVKLWDLNMRAAMQSMTNH------------------------TD 286 (315)
Q Consensus 243 ----~~~i~-~~~~~-------~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~------------------------~~ 286 (315)
-.... .+... +++.+.++-..+++|+.++. .+. +.++.+. -.
T Consensus 367 ~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~ 444 (496)
T 3kya_A 367 TEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFR 444 (496)
T ss_dssp GGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCS
T ss_pred cccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CCC-EEEEecccccccccCccccccCCCCchhhhhcC
Confidence 11244 45554 45677777777888999984 332 2222211 12
Q ss_pred ceEEEEEeeC-CCEEEEEeCCCcEEEeec
Q 021247 287 QVWGVSFRPL-GGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 287 ~v~~~~~s~~-~~~l~s~~~d~~i~i~~~ 314 (315)
...+|++.++ |...++=....+||.+++
T Consensus 445 ~P~gIavd~~~g~lyVaD~~N~rIrki~~ 473 (496)
T 3kya_A 445 DVSGLVYDDVKEMFYVHDQVGHTIRTISM 473 (496)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CCcEEEEECCCCEEEEEeCCCCEEEEEEC
Confidence 4779999997 666666666788888875
No 291
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.50 E-value=0.00013 Score=60.04 Aligned_cols=202 Identities=15% Similarity=0.242 Sum_probs=122.4
Q ss_pred EEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCC----CCC---EE-EEeeC--CCeEEEEECC
Q 021247 21 TWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHP----SGI---IA-ASASL--DSFVRVFDVD 90 (315)
Q Consensus 21 ~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~----~g~---~l-~s~~~--d~~i~~w~~~ 90 (315)
-|.........+++.....+-+.+||+ +++.+..+.. ..++.+..-| .|. ++ ++.-. +.+|+++++.
T Consensus 31 vw~~~~dp~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iD 107 (355)
T 3amr_A 31 IWLDPKTPQNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAID 107 (355)
T ss_dssp EECCSSCGGGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEEC
T ss_pred EecCCCCCCccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEEC
Confidence 366333334566777788899999999 5555555543 2344444433 222 22 33333 5789999774
Q ss_pred C-CceeEEeeC-------CcccEEEEEE--CCC-CCeEEEEecCCCeEEEEecC-------CcceeeeecCCCCCCCCCC
Q 021247 91 T-NASIATLEA-------SPSEVWQMQF--DPK-GTTLAVAGGGSASVKLWDTA-------TWNLIATLSIPRPEGLKPT 152 (315)
Q Consensus 91 ~-~~~~~~~~~-------~~~~v~~~~~--~~~-~~~~~~~~~~d~~i~~~d~~-------~~~~~~~~~~~~~~~~~~~ 152 (315)
. ...+..+.. ....+..+++ +|. +...++....++.+..|++. +.+.+.++.+..
T Consensus 108 p~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs------- 180 (355)
T 3amr_A 108 GKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS------- 180 (355)
T ss_dssp TTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS-------
T ss_pred CCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC-------
Confidence 2 223444421 1145566666 775 44456667788999999883 345566665432
Q ss_pred ccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcc-----cceeeeeec-CC-ccceEEEEEc--CCCCcEE-EEEeCC
Q 021247 153 DKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT-----RAKFLHHLE-GH-FMPVRSLVYS--PVDPRVL-FSASDD 222 (315)
Q Consensus 153 ~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~-----~~~~~~~~~-~~-~~~v~~~~~~--~~~~~~l-~s~~~d 222 (315)
.+..|...+....|+.+-++..|..+|.+ +++.+..+. ++ ...+..+++- +.+..+| +++-.+
T Consensus 181 -------q~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~ 253 (355)
T 3amr_A 181 -------QTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGN 253 (355)
T ss_dssp -------CEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGG
T ss_pred -------CcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCC
Confidence 26788999988899999888778777855 344454432 22 2356777773 3233344 455467
Q ss_pred CeEEEEeCC-CCeeEEEe
Q 021247 223 THVHMYDAE-GKSLVTAM 239 (315)
Q Consensus 223 ~~i~~wd~~-~~~~~~~~ 239 (315)
....+||.+ ..+.+..+
T Consensus 254 ~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 254 SSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp TEEEEEESSTTCCEEEEE
T ss_pred CEEEEEECCCCCcEEEEE
Confidence 899999997 45555544
No 292
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.49 E-value=9.5e-05 Score=68.38 Aligned_cols=200 Identities=15% Similarity=0.073 Sum_probs=111.2
Q ss_pred hcccc-ceEEEEEe-ecCCCCCcEEEEeeCCC----cEEEEcCCCC-cceeeccccccceEEEEeCCCCCEEEEeeCC--
Q 021247 11 NAHEE-SVWAVTWV-PATETRPALLLTGSLDE----TVKLWRPDDM-QLERTNTGHCLGVVSVAAHPSGIIAASASLD-- 81 (315)
Q Consensus 11 ~~h~~-~v~~v~~~-~~~~~~~~~l~sgs~d~----~v~~w~~~~~-~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d-- 81 (315)
.+|+- .+...+|+ |+++. +.++-+.+| .|++++.+++ +..... -......+.|+|+|+.|+-...|
T Consensus 169 ~~~~~~~~~~~~~S~PDG~~---lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~--~~~~~~~~~WspDg~~l~y~~~d~~ 243 (751)
T 2xe4_A 169 EGKAFCDVMEVKPAPPEHDL---VAFSVDMSGNEVYTIEFKRISDPSQTIADK--VSGTNGEIVWGPDHTSLFYVTKDET 243 (751)
T ss_dssp TTCSCCEEEEEEECTTTTCE---EEEEEESSSSSCEEEEEEETTCTTCCCCCC--EEEECSCCEECSSTTEEEEEEECTT
T ss_pred cCCCeEEEeeeEecCCCCCE---EEEEEeCCCCceEEEEEEECCCCCEeCCcc--ccCceeeEEEecCCCEEEEEEECCC
Confidence 44543 68889999 88752 334444333 4999998877 532110 01123467899999877766554
Q ss_pred ---CeEEEEECCCCce--eEEeeC-CcccEEEEEECCCCCeEEEEecC--CCeEEEEecCCcce-e--eeecCCCCCCCC
Q 021247 82 ---SFVRVFDVDTNAS--IATLEA-SPSEVWQMQFDPKGTTLAVAGGG--SASVKLWDTATWNL-I--ATLSIPRPEGLK 150 (315)
Q Consensus 82 ---~~i~~w~~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~--d~~i~~~d~~~~~~-~--~~~~~~~~~~~~ 150 (315)
..|+++++.+++. ...+.. .......+.|+|++++++++... ...|.++|+.+.+. . ..+. +.
T Consensus 244 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~-~~----- 317 (751)
T 2xe4_A 244 LRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVR-PR----- 317 (751)
T ss_dssp CCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESS-CC-----
T ss_pred CCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEee-cC-----
Confidence 3688888877642 233322 22345678899999988776543 34678888875421 1 1111 11
Q ss_pred CCccCCCCcceEEEEECCCCCEE-EEecCC----CcEEEEEcccceeeee-ecCCcc--ceEEEEEcCCCCcEEEEEeCC
Q 021247 151 PTDKSSSKKFVLSVAWSPDGRRI-ACGSMD----GTISVFDVTRAKFLHH-LEGHFM--PVRSLVYSPVDPRVLFSASDD 222 (315)
Q Consensus 151 ~~~~~~~~~~i~~~~~~~~~~~l-~~~s~d----g~i~i~d~~~~~~~~~-~~~~~~--~v~~~~~~~~~~~~l~s~~~d 222 (315)
.........|+. |+.| +....+ ..|..+|+.+...... +..+.. .+..+.+. +..++++...+
T Consensus 318 ------~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~ 388 (751)
T 2xe4_A 318 ------EKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRA 388 (751)
T ss_dssp ------CTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC--SSEEEEEEEET
T ss_pred ------CCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE--CCEEEEEEEeC
Confidence 011123344443 5544 444333 3577777764211222 223333 33444443 56677777777
Q ss_pred Ce--EEEEeC
Q 021247 223 TH--VHMYDA 230 (315)
Q Consensus 223 ~~--i~~wd~ 230 (315)
+. |.++++
T Consensus 389 g~~~l~~~dl 398 (751)
T 2xe4_A 389 GLTRIWTMMA 398 (751)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 75 556665
No 293
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.46 E-value=0.00013 Score=65.66 Aligned_cols=221 Identities=8% Similarity=0.001 Sum_probs=125.6
Q ss_pred CCCeEEEEECCCCc-eeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCC
Q 021247 80 LDSFVRVFDVDTNA-SIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSK 158 (315)
Q Consensus 80 ~d~~i~~w~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (315)
....|+..++.... ..............++|++.++.++++-...+.|..+++........+.. ...
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~------------~~~ 83 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV------------SGL 83 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEEC------------SSC
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEe------------CCC
Confidence 35668888887543 22222223445778999998888888766678888888765321111110 011
Q ss_pred cceEEEEECCCCC-EEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEe-CCCeEEEEeCCCCeeE
Q 021247 159 KFVLSVAWSPDGR-RIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSAS-DDTHVHMYDAEGKSLV 236 (315)
Q Consensus 159 ~~i~~~~~~~~~~-~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~d~~i~~wd~~~~~~~ 236 (315)
.....+++.+.++ ++++-...+.|.+.++................+.+++.|.++.++++-. ..+.|...++.+....
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 163 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE
Confidence 2367899998555 5566677889999998654322222233445678999987776777653 3567888887765443
Q ss_pred EEeecccccEEEEEEcCCCCeE-EEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEee
Q 021247 237 TAMSGHASWVLSVDASPDGAAI-TTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313 (315)
Q Consensus 237 ~~~~~~~~~i~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 313 (315)
........+.+.+++++++..| ++-...+.|...+++.........+......++++..+ ....+-...+.|...|
T Consensus 164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d 240 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACN 240 (619)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEE
T ss_pred EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEE
Confidence 3333445678999999865544 55556678988888743322222212223345666544 2233433445565544
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.37 E-value=3.9e-06 Score=76.79 Aligned_cols=219 Identities=11% Similarity=0.012 Sum_probs=126.6
Q ss_pred CCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCc----ceeeeecCCCCCCCCCCccC
Q 021247 80 LDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATW----NLIATLSIPRPEGLKPTDKS 155 (315)
Q Consensus 80 ~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~----~~~~~~~~~~~~~~~~~~~~ 155 (315)
..+.|+..++........+.. ...+..++|++.+..++++-...+.|..+++... .....+ .
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i-------------~ 449 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-------------S 449 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC-------------C
T ss_pred CccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE-------------e
Confidence 345688888776554333322 2345678899887777777666788888887641 110000 0
Q ss_pred CCCcceEEEEECCC-CCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCC-CeEEEEeCCCC
Q 021247 156 SSKKFVLSVAWSPD-GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD-THVHMYDAEGK 233 (315)
Q Consensus 156 ~~~~~i~~~~~~~~-~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-~~i~~wd~~~~ 233 (315)
........+++.+. ++++++-...+.|.++++........+.......+.+++.|.++.++++-... +.|.++++.+.
T Consensus 450 ~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~ 529 (699)
T 1n7d_A 450 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 529 (699)
T ss_dssp SCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC
T ss_pred CCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC
Confidence 01112456888864 45556666778999999875443333332234457888888666666665443 78888887654
Q ss_pred eeEEEeecccccEEEEEEcCCC-CeEEEEeCCCcEEEEecCccceehccc--ccccceEEEEEeeCCCEEEEEeCCCcEE
Q 021247 234 SLVTAMSGHASWVLSVDASPDG-AAITTGSSDRTVKLWDLNMRAAMQSMT--NHTDQVWGVSFRPLGGRVVSVSDDKSIS 310 (315)
Q Consensus 234 ~~~~~~~~~~~~i~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~d~~i~ 310 (315)
.............+.|+++|++ ++.++-...+.|..++++.......+. .......++++..+ ..+++-...+.|.
T Consensus 530 ~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~ 608 (699)
T 1n7d_A 530 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIF 608 (699)
T ss_dssp CCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEE
T ss_pred CeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEE
Confidence 3322222234456789999875 455666667789999986432211111 11223445566443 3344555667887
Q ss_pred Eee
Q 021247 311 LYE 313 (315)
Q Consensus 311 i~~ 313 (315)
.++
T Consensus 609 ~~d 611 (699)
T 1n7d_A 609 SAN 611 (699)
T ss_dssp EEE
T ss_pred EEE
Confidence 776
No 295
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.36 E-value=0.001 Score=57.70 Aligned_cols=246 Identities=11% Similarity=0.045 Sum_probs=145.6
Q ss_pred ceEEEEEeec-CCCCCcEEEEeeCCCcEEEEcCCCCcceeeccc---cccceEEEEe-------CCCCCEEEEeeCCC--
Q 021247 16 SVWAVTWVPA-TETRPALLLTGSLDETVKLWRPDDMQLERTNTG---HCLGVVSVAA-------HPSGIIAASASLDS-- 82 (315)
Q Consensus 16 ~v~~v~~~~~-~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~---h~~~v~~~~~-------~~~g~~l~s~~~d~-- 82 (315)
....|+|.|. .. .++++-...+.|++.|+.+..+...... .......++| +++|..++.+...+
T Consensus 140 ~p~~la~dp~~~~---~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~ 216 (496)
T 3kya_A 140 DNGRLAFDPLNKD---HLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK 216 (496)
T ss_dssp SEEEEEEETTEEE---EEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT
T ss_pred CCCEEEEccCCCC---EEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCC
Confidence 5778899873 22 2444444446789999887666554432 2235889999 99998555554433
Q ss_pred -----eEEEEECCC-Ccee-----EEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecC-------Ccce-------
Q 021247 83 -----FVRVFDVDT-NASI-----ATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTA-------TWNL------- 137 (315)
Q Consensus 83 -----~i~~w~~~~-~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~-------~~~~------- 137 (315)
.|.+.+... +... ..+.. ......++++|++..++++...++.|..+|+. ++..
T Consensus 217 ~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~ 295 (496)
T 3kya_A 217 GDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKN 295 (496)
T ss_dssp GGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGG
T ss_pred cccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccc
Confidence 266665443 1111 22221 12345778899777788888888999999987 3332
Q ss_pred ----eee-ecCCCCCCCCCCccCCCCcceEEEEECCCCCE-EEEecCCCcEEEEEcc--cceee--eeec------C---
Q 021247 138 ----IAT-LSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRR-IACGSMDGTISVFDVT--RAKFL--HHLE------G--- 198 (315)
Q Consensus 138 ----~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~s~dg~i~i~d~~--~~~~~--~~~~------~--- 198 (315)
... +.. ....+...++|+|+|+. +++-+..+.|+.+|.. .+... ..+- +
T Consensus 296 ~~g~~~~l~~~------------~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~D 363 (496)
T 3kya_A 296 NPNTFKQLFTI------------ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRD 363 (496)
T ss_dssp CTTTEEEEEEC------------SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBC
T ss_pred cccccceeEec------------CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccC
Confidence 011 111 11223578999999995 4556778889996653 33210 1111 1
Q ss_pred ------CccceE-EEEEcC------CCCcEEEEEeCCCeEEEEeCCCCeeEEEeecc-----------------------
Q 021247 199 ------HFMPVR-SLVYSP------VDPRVLFSASDDTHVHMYDAEGKSLVTAMSGH----------------------- 242 (315)
Q Consensus 199 ------~~~~v~-~~~~~~------~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~----------------------- 242 (315)
...... .+.... .++.++++=...+.|+.++..+ . +..+.+.
T Consensus 364 G~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G-~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a 441 (496)
T 3kya_A 364 DVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEG-I-VSTYAGRGASTSLADGNQWGTDDGDLREVA 441 (496)
T ss_dssp CBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTC-B-EEEEEESCTTHHHHHSCSCCCCCEETTTTC
T ss_pred CcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCC-C-EEEEecccccccccCccccccCCCCchhhh
Confidence 111233 334431 2456777777788999998543 2 3333221
Q ss_pred -cccEEEEEEcCC-CCeEEEEeCCCcEEEEecCccceeh
Q 021247 243 -ASWVLSVDASPD-GAAITTGSSDRTVKLWDLNMRAAMQ 279 (315)
Q Consensus 243 -~~~i~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~ 279 (315)
-.....|+++++ +.+.++=..+.+||.+++......+
T Consensus 442 ~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 442 RFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp CCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC---
T ss_pred hcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcccc
Confidence 124678999996 7777777778889999887644433
No 296
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.34 E-value=0.00077 Score=55.65 Aligned_cols=267 Identities=10% Similarity=0.075 Sum_probs=141.4
Q ss_pred ccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceee--c--cccccceEEEEeCCCCCEEEEeeCCCeEEEEEC
Q 021247 14 EESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERT--N--TGHCLGVVSVAAHPSGIIAASASLDSFVRVFDV 89 (315)
Q Consensus 14 ~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~--~--~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~ 89 (315)
...+.+|.|.+... .++ ++.+|.|... .+.++.-.. . ......+..+.+++ +..++ ++.++.|.. ..
T Consensus 35 ~~~~~~v~~~~~~~----~~~-~G~~g~i~~s-~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~ 105 (327)
T 2xbg_A 35 TATILDMSFIDRHH----GWL-VGVNATLMET-RDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-TT 105 (327)
T ss_dssp SSCEEEEEESSSSC----EEE-EETTTEEEEE-SSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE-ES
T ss_pred CCcEEEEEECCCCc----EEE-EcCCCeEEEe-CCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEE-EC
Confidence 34788888865433 345 5567765333 332221111 1 11244678888876 44444 455665544 33
Q ss_pred CCCceeEEeeC---CcccEEEEEECCCCCeEEEEecCCCeEEE-Eec-CCcceeeeecCCCCCCCCCCccCCCCcceEEE
Q 021247 90 DTNASIATLEA---SPSEVWQMQFDPKGTTLAVAGGGSASVKL-WDT-ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSV 164 (315)
Q Consensus 90 ~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~d~~i~~-~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 164 (315)
+.++.-..... .+..+..+.+.+++. +++++ .++.|.. .|- .+++.+ ..+ ....+..+
T Consensus 106 DgG~tW~~~~~~~~~~~~~~~i~~~~~~~-~~~~~-~~g~v~~S~DgG~tW~~~---~~~------------~~~~~~~~ 168 (327)
T 2xbg_A 106 DGGQSWSQIPLDPKLPGSPRLIKALGNGS-AEMIT-NVGAIYRTKDSGKNWQAL---VQE------------AIGVMRNL 168 (327)
T ss_dssp STTSSCEECCCCTTCSSCEEEEEEEETTE-EEEEE-TTCCEEEESSTTSSEEEE---ECS------------CCCCEEEE
T ss_pred CCCCCceECccccCCCCCeEEEEEECCCC-EEEEe-CCccEEEEcCCCCCCEEe---ecC------------CCcceEEE
Confidence 33443333221 234566777665554 44444 3454432 221 122211 111 11236789
Q ss_pred EECCCCCEEEEecCCCcEEEEEc--ccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEee-c
Q 021247 165 AWSPDGRRIACGSMDGTISVFDV--TRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS-G 241 (315)
Q Consensus 165 ~~~~~~~~l~~~s~dg~i~i~d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-~ 241 (315)
.+.+++.+++++...+..+-.|- .+-+.+ -......+..+.+.+. +.+ +.++.+|.+++.+...+..-..+. .
T Consensus 169 ~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~-g~~-~~~~~~G~~~~s~~D~G~tW~~~~~~ 244 (327)
T 2xbg_A 169 NRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH--NRTTSRRLHNMGFTPD-GRL-WMIVNGGKIAFSDPDNSENWGELLSP 244 (327)
T ss_dssp EECTTSCEEEEETTSSEEEEECTTCSSCEEE--ECCSSSCEEEEEECTT-SCE-EEEETTTEEEEEETTEEEEECCCBCT
T ss_pred EEcCCCcEEEEECCCcEEEEeCCCCCceeEC--CCCCCCccceeEECCC-CCE-EEEeCCceEEEecCCCCCeeEeccCC
Confidence 99998888777654443444442 122222 1233456778888774 444 455567877776433232222111 1
Q ss_pred ---ccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccc---cccceEEEEEeeCCCEEEEEeCCCcEEEee
Q 021247 242 ---HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN---HTDQVWGVSFRPLGGRVVSVSDDKSISLYE 313 (315)
Q Consensus 242 ---~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~ 313 (315)
+...+.++.+.+++.+++++ .++.| ++..+.++....+.. ....+.++.|.++ ..++.++.+|+|.-++
T Consensus 245 ~~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~-~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 245 LRRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSP-DQGFILGQKGILLRYV 319 (327)
T ss_dssp TSSCCSCEEEEEESSSSCEEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEET-TEEEEECSTTEEEEEC
T ss_pred cccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECC-CceEEEcCCceEEEEc
Confidence 22357889999887766654 46766 444555555444332 2356788989765 4688888999886654
No 297
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.30 E-value=0.00052 Score=55.96 Aligned_cols=200 Identities=10% Similarity=0.076 Sum_probs=124.5
Q ss_pred EEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEE---CCCCCEEEEec-----
Q 021247 106 WQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW---SPDGRRIACGS----- 177 (315)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~l~~~s----- 177 (315)
.+.+|++....++++.-..++|..||...+..... .++... ........+..+.| .|+++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s-----~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGAS-----SNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTC-----CSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCcc-----ccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 46789887777878777899999999875433322 222100 00011224689999 68877777533
Q ss_pred --------CCCcEEEEEcc---cceeeeeec--CC-----------ccceEEEEEcCCCCcEEEEEeCC-CeEEEEeCCC
Q 021247 178 --------MDGTISVFDVT---RAKFLHHLE--GH-----------FMPVRSLVYSPVDPRVLFSASDD-THVHMYDAEG 232 (315)
Q Consensus 178 --------~dg~i~i~d~~---~~~~~~~~~--~~-----------~~~v~~~~~~~~~~~~l~s~~~d-~~i~~wd~~~ 232 (315)
.+..+..||+. +++.+.... .. .....+++..+ +++..++++.- +.|...+..+
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSADG 168 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTTS
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCCC
Confidence 25779999998 676554332 11 12478899987 67788888887 8898888876
Q ss_pred CeeEEEeec-----ccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccce--ehccc--cc---ccceEEE-EEeeCCCE
Q 021247 233 KSLVTAMSG-----HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA--MQSMT--NH---TDQVWGV-SFRPLGGR 299 (315)
Q Consensus 233 ~~~~~~~~~-----~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--~~~~~--~~---~~~v~~~-~~s~~~~~ 299 (315)
......... .....+.++++|++..|++...+|.+..+|++.... +. .. +. -.....+ ..-.+|+.
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~-~~~~G~~~~~~~~dgilp~~~~G~v 247 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEP-VKINGDFGTLSGTEKIVTVPVGNES 247 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEE-CEESSCCCCCTTEEEEEEEEETTEE
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeec-ccccCCcccccCcccccccccCCEE
Confidence 633322211 122356899999999888887799999999874322 11 11 21 1223343 33446666
Q ss_pred -EEEEeCCCcEEEee
Q 021247 300 -VVSVSDDKSISLYE 313 (315)
Q Consensus 300 -l~s~~~d~~i~i~~ 313 (315)
|++.+..+.+.+.+
T Consensus 248 llV~~~~~~~~~l~S 262 (334)
T 2p9w_A 248 VLVGARAPYAISFRS 262 (334)
T ss_dssp EEEEEETTEEEEEEC
T ss_pred EEEEcCCCCEEEEEC
Confidence 45555566665543
No 298
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.10 E-value=0.0027 Score=52.30 Aligned_cols=205 Identities=11% Similarity=0.235 Sum_probs=120.9
Q ss_pred EEEeCC---CCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCC----CCe--E-EEEecC--CCeEEEEec
Q 021247 65 SVAAHP---SGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPK----GTT--L-AVAGGG--SASVKLWDT 132 (315)
Q Consensus 65 ~~~~~~---~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~--~-~~~~~~--d~~i~~~d~ 132 (315)
.+..+| ...+++....++-+.++|+ +++.++.+.. ..+..+..-|. ++. + +++.-. +++|.+|++
T Consensus 30 avw~~~~dp~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~i 106 (355)
T 3amr_A 30 AIWLDPKTPQNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAI 106 (355)
T ss_dssp EEECCSSCGGGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEE
T ss_pred cEecCCCCCCccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEE
Confidence 444554 3456777777889999999 7787777753 44555555442 221 3 344444 689999977
Q ss_pred C-CcceeeeecCC-CCCCCCCCccCCCCcceEEEEE--CCC-CC-EEEEecCCCcEEEEEcc-------cceeeeeecCC
Q 021247 133 A-TWNLIATLSIP-RPEGLKPTDKSSSKKFVLSVAW--SPD-GR-RIACGSMDGTISVFDVT-------RAKFLHHLEGH 199 (315)
Q Consensus 133 ~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~--~~~-~~-~l~~~s~dg~i~i~d~~-------~~~~~~~~~~~ 199 (315)
. ..+.+..+... .+ . ......+..+|+ +|. +. ++++...+|.+..|++. +.+.+.++...
T Consensus 107 Dp~~~~l~~i~~~~~p-----v--~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg 179 (355)
T 3amr_A 107 DGKNGTLQSMTDPDHP-----I--ATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN 179 (355)
T ss_dssp CTTTCCEEECSCTTSC-----E--ECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS
T ss_pred CCCCCceeeccccccC-----c--CCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC
Confidence 3 12223333110 00 0 000022456666 774 43 67788889999999882 34555665543
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEeCC-----CCeeEEEee-ccc-ccEEEEEE--cCCCC-eEEEEe-CCCcEE
Q 021247 200 FMPVRSLVYSPVDPRVLFSASDDTHVHMYDAE-----GKSLVTAMS-GHA-SWVLSVDA--SPDGA-AITTGS-SDRTVK 268 (315)
Q Consensus 200 ~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~-----~~~~~~~~~-~~~-~~i~~~~~--~~~~~-~l~s~~-~d~~i~ 268 (315)
..+..+...+ ....|+.+-.+.-|..|+.+ ..+++.... ++. ..+..+++ .++++ +|++++ .+.+..
T Consensus 180 -sq~EgcvvDd-~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~ 257 (355)
T 3amr_A 180 -SQTEGMAADD-EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYA 257 (355)
T ss_dssp -SCEEEEEEET-TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEE
T ss_pred -CCcceEEEcC-CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEE
Confidence 3556667776 45577788887778888855 234554432 222 35777777 45555 555555 677899
Q ss_pred EEecC-ccceehcc
Q 021247 269 LWDLN-MRAAMQSM 281 (315)
Q Consensus 269 iwd~~-~~~~~~~~ 281 (315)
+||.. ..+.+..+
T Consensus 258 Vydr~~~~~~vg~f 271 (355)
T 3amr_A 258 IYDRQGKNKYVADF 271 (355)
T ss_dssp EEESSTTCCEEEEE
T ss_pred EEECCCCCcEEEEE
Confidence 99996 44444333
No 299
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.07 E-value=0.0035 Score=52.27 Aligned_cols=229 Identities=15% Similarity=0.108 Sum_probs=122.8
Q ss_pred ceEEEEeCCCCCEEEEeeCCCeEEEEECCCCce--eEEee---CCcccEEEEEECCC---CCeEEEEecCC-----CeEE
Q 021247 62 GVVSVAAHPSGIIAASASLDSFVRVFDVDTNAS--IATLE---ASPSEVWQMQFDPK---GTTLAVAGGGS-----ASVK 128 (315)
Q Consensus 62 ~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~~~~~~~~d-----~~i~ 128 (315)
....+.+.|+|.++++ ..++.|++++ ++.. +..+. ........++++|+ +..++++-... ..|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4678999999986665 5569999998 3332 11111 12346789999998 56666654432 5677
Q ss_pred EEecCCccee--ee-ec-CCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecC-------------CCcEEEEEcccc-
Q 021247 129 LWDTATWNLI--AT-LS-IPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSM-------------DGTISVFDVTRA- 190 (315)
Q Consensus 129 ~~d~~~~~~~--~~-~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~-------------dg~i~i~d~~~~- 190 (315)
.++....+.. .. +. ++... ........++|.|+|.+.++.+. .|.|.-++....
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~--------~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~ 180 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARP--------HGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEP 180 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCT--------TCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSB
T ss_pred EEEeCCCCcCceEEEEEeCCCCC--------CCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCC
Confidence 7776543211 11 11 11000 01112357999999976665322 256666665430
Q ss_pred -----------eeeee-ecCCccceEEEEEcCCCCcEEEEEeCCCe--------EEEEeCCC----------------Ce
Q 021247 191 -----------KFLHH-LEGHFMPVRSLVYSPVDPRVLFSASDDTH--------VHMYDAEG----------------KS 234 (315)
Q Consensus 191 -----------~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~d~~--------i~~wd~~~----------------~~ 234 (315)
..... ..++ .....++|+|.++.++++-..... |.+...-. ..
T Consensus 181 p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~ 259 (352)
T 2ism_A 181 APGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRD 259 (352)
T ss_dssp CTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCC
T ss_pred CCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcC
Confidence 00011 1122 234677888855666655443332 43332111 01
Q ss_pred eEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccce------ehcccccccceEEEEEeeCCCEEEEEe
Q 021247 235 LVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA------MQSMTNHTDQVWGVSFRPLGGRVVSVS 304 (315)
Q Consensus 235 ~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~------~~~~~~~~~~v~~~~~s~~~~~l~s~~ 304 (315)
.+..+ .+......+++ .+|.++++.-..+.|...+++.... ...+......+..+++.|||...++..
T Consensus 260 p~~~~-~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 260 PLYFW-PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp CSEEC-TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CeEec-CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 11122 12234566777 4677666666677788777764321 111212235788999999998766653
No 300
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.06 E-value=0.00065 Score=55.42 Aligned_cols=152 Identities=9% Similarity=0.185 Sum_probs=100.0
Q ss_pred eEEEEECCCCCEEEEe-cCCCcEEEEEcccceeeee-ecC----C--ccceEEEEE---cCCCCcEEEEEe---------
Q 021247 161 VLSVAWSPDGRRIACG-SMDGTISVFDVTRAKFLHH-LEG----H--FMPVRSLVY---SPVDPRVLFSAS--------- 220 (315)
Q Consensus 161 i~~~~~~~~~~~l~~~-s~dg~i~i~d~~~~~~~~~-~~~----~--~~~v~~~~~---~~~~~~~l~s~~--------- 220 (315)
..+++|++....|..+ -..++|..||...+..... +.+ . ...+..+.| .|. ++++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTTCTTS
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEcccccccccc
Confidence 4478998865555555 4789999999975543222 221 1 113578899 564 66776543
Q ss_pred ----CCCeEEEEeCC---CCeeEEEee--cc-----------cccEEEEEEcCCCCeEEEEeCC-CcEEEEecCccceeh
Q 021247 221 ----DDTHVHMYDAE---GKSLVTAMS--GH-----------ASWVLSVDASPDGAAITTGSSD-RTVKLWDLNMRAAMQ 279 (315)
Q Consensus 221 ----~d~~i~~wd~~---~~~~~~~~~--~~-----------~~~i~~~~~~~~~~~l~s~~~d-~~i~iwd~~~~~~~~ 279 (315)
.+..+..||+. +++.+.... .. .....+++.+++|+..++++.. +.|...+.+.. .+.
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~ 172 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVS 172 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEE
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEe
Confidence 26789999998 555443322 11 1348899999999998988888 87766665532 221
Q ss_pred cc------cccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 280 SM------TNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 280 ~~------~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
.+ .......+.++++|+|..|+....+|.+.-||+
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~ 213 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDV 213 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEEC
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcC
Confidence 11 111123679999999998887766999988875
No 301
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.97 E-value=0.015 Score=56.21 Aligned_cols=130 Identities=15% Similarity=0.209 Sum_probs=71.7
Q ss_pred EEEEEcccceeeeeecC-CccceEEEE---EcCCCCcEEEEEe----------CCCeEEEEeCCCCeeEEEe-ecccccE
Q 021247 182 ISVFDVTRAKFLHHLEG-HFMPVRSLV---YSPVDPRVLFSAS----------DDTHVHMYDAEGKSLVTAM-SGHASWV 246 (315)
Q Consensus 182 i~i~d~~~~~~~~~~~~-~~~~v~~~~---~~~~~~~~l~s~~----------~d~~i~~wd~~~~~~~~~~-~~~~~~i 246 (315)
|++.|..+.+.+..+.- ....+.+++ |......+++.|. ..|.|++|+...+++.... ....+.+
T Consensus 809 i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v 888 (1158)
T 3ei3_A 809 LLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV 888 (1158)
T ss_dssp EEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCE
T ss_pred EEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcC
Confidence 56666665555444332 122334443 4332346777776 2478999998654433221 2336778
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 247 LSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 247 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
++++-- +|+++++ ...+|++|++...+.+..-..+-..+..+.....+++++.|..-+.|.++.|
T Consensus 889 ~al~~~-~g~Lla~--ig~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y 953 (1158)
T 3ei3_A 889 YSMVEF-NGKLLAS--INSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAY 953 (1158)
T ss_dssp EEEEEE-TTEEEEE--ETTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEE
T ss_pred EEEeee-CCEEEEE--cCCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEE
Confidence 887633 4544443 3578999999765544311111122333344445778888877777776654
No 302
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.79 E-value=0.0038 Score=50.59 Aligned_cols=222 Identities=15% Similarity=0.157 Sum_probs=111.0
Q ss_pred cEEEEee-CC-----CcEEEEcCCCCcceee--ccccccceEEEEeCCCCCEEEEeeCC-----CeEEEEECCCCc---e
Q 021247 31 ALLLTGS-LD-----ETVKLWRPDDMQLERT--NTGHCLGVVSVAAHPSGIIAASASLD-----SFVRVFDVDTNA---S 94 (315)
Q Consensus 31 ~~l~sgs-~d-----~~v~~w~~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~~~d-----~~i~~w~~~~~~---~ 94 (315)
.+++.|+ .+ ..+..||+.+.+-... .+........+. .++.+++.|+.+ ..+.++|+.+.. -
T Consensus 16 ~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 16 VLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp EEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCC
T ss_pred EEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCee
Confidence 3666676 33 3678888766542221 111111111222 256777777755 458899988776 3
Q ss_pred eEEeeCCc--ccEEEEEECCCCCeEEEEecCC-----CeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEEC
Q 021247 95 IATLEASP--SEVWQMQFDPKGTTLAVAGGGS-----ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS 167 (315)
Q Consensus 95 ~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 167 (315)
...-.... ..-..+.+ + ..+++.|+.+ ..+.+||..+.+....-..+.+ ...+ ..+.+
T Consensus 94 ~~~~~~p~~r~~~~~~~~--~-~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-------r~~~----~~~~~- 158 (301)
T 2vpj_A 94 YSVAPMNVRRGLAGATTL--G-DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA-------REGA----GLVVA- 158 (301)
T ss_dssp EEECCCSSCCBSCEEEEE--T-TEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC-------CBSC----EEEEE-
T ss_pred EECCCCCCCccceeEEEE--C-CEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCC-------cccc----eEEEE-
Confidence 22211111 11112222 2 3466666543 4688899877554433222111 1111 12222
Q ss_pred CCCCEEEEecCC-----CcEEEEEcccceeeee--ecCCccceEEEEEcCCCCcEEEEEeCC-----CeEEEEeCCCCee
Q 021247 168 PDGRRIACGSMD-----GTISVFDVTRAKFLHH--LEGHFMPVRSLVYSPVDPRVLFSASDD-----THVHMYDAEGKSL 235 (315)
Q Consensus 168 ~~~~~l~~~s~d-----g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~ 235 (315)
+++.++.|+.+ ..+..||+.+.+.... +.........+.+ ++++++.|+.+ ..+.+||.++.+-
T Consensus 159 -~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 234 (301)
T 2vpj_A 159 -SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL---NDHIYVVGGFDGTAHLSSVEAYNIRTDSW 234 (301)
T ss_dssp -TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred -CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE---CCEEEEEeCCCCCcccceEEEEeCCCCcE
Confidence 56677777654 4589999987765432 1111111122222 45677777764 4688999887643
Q ss_pred EEE--eecccccEEEEEEcCCCCeEEEEeCC-----CcEEEEecCcc
Q 021247 236 VTA--MSGHASWVLSVDASPDGAAITTGSSD-----RTVKLWDLNMR 275 (315)
Q Consensus 236 ~~~--~~~~~~~i~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~ 275 (315)
... +.........+.+ ++++++.|+.+ ..|.+||..+.
T Consensus 235 ~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 235 TTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp EEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred EECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 222 1111111112222 56677777765 34677777653
No 303
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.77 E-value=0.0051 Score=50.03 Aligned_cols=223 Identities=10% Similarity=0.086 Sum_probs=112.1
Q ss_pred CcEEEEeeCC--CcEEEEcCCCCcceee--ccccccceEEEEeCCCCCEEEEeeCC----CeEEEEECCCCceeEEeeCC
Q 021247 30 PALLLTGSLD--ETVKLWRPDDMQLERT--NTGHCLGVVSVAAHPSGIIAASASLD----SFVRVFDVDTNASIATLEAS 101 (315)
Q Consensus 30 ~~~l~sgs~d--~~v~~w~~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~~~d----~~i~~w~~~~~~~~~~~~~~ 101 (315)
+.+++.|+.+ ..+..||+.+.+-... .+.....-..+. .++.+++.|+.+ ..+.++|+.+++-...-...
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 3466777654 5788888876542221 111111112222 256677777755 66888998877543222111
Q ss_pred c--ccEEEEEECCCCCeEEEEecCC------CeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEE
Q 021247 102 P--SEVWQMQFDPKGTTLAVAGGGS------ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI 173 (315)
Q Consensus 102 ~--~~v~~~~~~~~~~~~~~~~~~d------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 173 (315)
. ..-..+.+ +..+++.|+.+ ..+.+||..+.+....-..+. ....+ ..+.+ +++.+
T Consensus 90 ~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~-------~r~~~----~~~~~--~~~iy 153 (306)
T 3ii7_A 90 TPRDSLAACAA---EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLT-------QRCSH----GMVEA--NGLIY 153 (306)
T ss_dssp SCCBSCEEEEE---TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSS-------CCBSC----EEEEE--TTEEE
T ss_pred ccccceeEEEE---CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcC-------Cccee----EEEEE--CCEEE
Confidence 1 11112222 33466666644 468889988765443221111 11111 12222 55666
Q ss_pred EEecC---------CCcEEEEEcccceeeee--ecCCccceEEEEEcCCCCcEEEEEeCC-----CeEEEEeCCCCeeEE
Q 021247 174 ACGSM---------DGTISVFDVTRAKFLHH--LEGHFMPVRSLVYSPVDPRVLFSASDD-----THVHMYDAEGKSLVT 237 (315)
Q Consensus 174 ~~~s~---------dg~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~ 237 (315)
+.|+. -..+.+||+.+.+.... +.........+.+ ++++++.|+.+ ..+.+||+.+.+-..
T Consensus 154 v~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~ 230 (306)
T 3ii7_A 154 VCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV---KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKM 230 (306)
T ss_dssp EECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEECCEETTEEBCCEEEEETTTTEEEE
T ss_pred EECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE---CCEEEEEeCCCCCCCCceEEEeeCCCCcEEE
Confidence 66653 34588999987765432 1111111122222 45677777653 358889987654222
Q ss_pred E--eecccccEEEEEEcCCCCeEEEEeCC-----CcEEEEecCcc
Q 021247 238 A--MSGHASWVLSVDASPDGAAITTGSSD-----RTVKLWDLNMR 275 (315)
Q Consensus 238 ~--~~~~~~~i~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~ 275 (315)
. +.........+.+ ++++++.|+.+ ..+.+||..+.
T Consensus 231 ~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 231 VSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp CCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred CCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 1 1111111122222 56777888754 45788888653
No 304
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.75 E-value=0.0047 Score=50.07 Aligned_cols=209 Identities=16% Similarity=0.129 Sum_probs=101.7
Q ss_pred CeEEEEECCCCceeEEeeCCcc---cEEEEEECCCCCeEEEEecCC-----CeEEEEecCCcc---eeeeecCCCCCCCC
Q 021247 82 SFVRVFDVDTNASIATLEASPS---EVWQMQFDPKGTTLAVAGGGS-----ASVKLWDTATWN---LIATLSIPRPEGLK 150 (315)
Q Consensus 82 ~~i~~w~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~~~~---~~~~~~~~~~~~~~ 150 (315)
..+..+|+.+.+-.. +...+. ....+.. + ..+++.|+.+ ..+.+||..+.+ ....-..+.
T Consensus 31 ~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~-~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~----- 101 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSF-LPSITRKRRYVASVSL--H-DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNV----- 101 (301)
T ss_dssp CCEEEEETTTTEEEE-CCCCSSCCBSCEEEEE--T-TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSS-----
T ss_pred eEEEEEcCCCCeEEe-CCCCChhhccccEEEE--C-CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCC-----
Confidence 357888887765322 111111 1112222 2 3456666643 468889987755 332211111
Q ss_pred CCccCCCCcceEEEEECCCCCEEEEecCC-----CcEEEEEcccceeeee--ecCCccceEEEEEcCCCCcEEEEEeCC-
Q 021247 151 PTDKSSSKKFVLSVAWSPDGRRIACGSMD-----GTISVFDVTRAKFLHH--LEGHFMPVRSLVYSPVDPRVLFSASDD- 222 (315)
Q Consensus 151 ~~~~~~~~~~i~~~~~~~~~~~l~~~s~d-----g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~d- 222 (315)
.... ...+.+ +++.++.|+.+ ..+.+||+.+.+.... +.........+.+ ++++++.|+.+
T Consensus 102 --~r~~----~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~ 170 (301)
T 2vpj_A 102 --RRGL----AGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA---SGVIYCLGGYDG 170 (301)
T ss_dssp --CCBS----CEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE---TTEEEEECCBCS
T ss_pred --Cccc----eeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE---CCEEEEECCCCC
Confidence 1111 112222 56666777643 3588999887765432 2111111122222 45677777654
Q ss_pred ----CeEEEEeCCCCeeEEE--eecccccEEEEEEcCCCCeEEEEeCC-----CcEEEEecCccc--eehcccccccceE
Q 021247 223 ----THVHMYDAEGKSLVTA--MSGHASWVLSVDASPDGAAITTGSSD-----RTVKLWDLNMRA--AMQSMTNHTDQVW 289 (315)
Q Consensus 223 ----~~i~~wd~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~--~~~~~~~~~~~v~ 289 (315)
..+.+||..+.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+.+ .+..+........
T Consensus 171 ~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~ 248 (301)
T 2vpj_A 171 LNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVG 248 (301)
T ss_dssp SCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCE
T ss_pred CcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCccccee
Confidence 4588899876643221 1111111112222 56777777764 468899987543 2322222111222
Q ss_pred EEEEeeCCCEEEEEeCCC-----cEEEeec
Q 021247 290 GVSFRPLGGRVVSVSDDK-----SISLYEY 314 (315)
Q Consensus 290 ~~~~s~~~~~l~s~~~d~-----~i~i~~~ 314 (315)
.+. .+++.++.||.++ .+.+||.
T Consensus 249 ~~~--~~~~i~v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 249 ATV--LRGRLYAIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp EEE--ETTEEEEECCBCSSSBEEEEEEEET
T ss_pred EEE--ECCEEEEEcCcCCCcccccEEEEcC
Confidence 222 2566667777653 4566664
No 305
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.69 E-value=0.016 Score=47.75 Aligned_cols=226 Identities=9% Similarity=0.013 Sum_probs=118.9
Q ss_pred cceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeC----CcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcc
Q 021247 61 LGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEA----SPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWN 136 (315)
Q Consensus 61 ~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~ 136 (315)
..+.++.+.+.+..++ ++.++.|. ...+.++.-..... ....+..+.++| + .+++. +..+.|..- ...++
T Consensus 36 ~~~~~v~~~~~~~~~~-~G~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~-~~~~~-g~~g~i~~S-~DgG~ 109 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWL-VGVNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-N-EGWIV-GEPPIMLHT-TDGGQ 109 (327)
T ss_dssp SCEEEEEESSSSCEEE-EETTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-T-EEEEE-EETTEEEEE-SSTTS
T ss_pred CcEEEEEECCCCcEEE-EcCCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-C-eEEEE-ECCCeEEEE-CCCCC
Confidence 4688999987777777 45677653 33344433222211 233678888876 3 34444 345544432 11121
Q ss_pred eeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEE-EEEcccceeee-eecCCccceEEEEEcCCCCc
Q 021247 137 LIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTIS-VFDVTRAKFLH-HLEGHFMPVRSLVYSPVDPR 214 (315)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~-i~d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~ 214 (315)
.-.....+. .....+..+.+.+++..++++. ++.|+ -.| .++... ........+..+.+.| ++.
T Consensus 110 tW~~~~~~~----------~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~D--gG~tW~~~~~~~~~~~~~~~~~~-~~~ 175 (327)
T 2xbg_A 110 SWSQIPLDP----------KLPGSPRLIKALGNGSAEMITN-VGAIYRTKD--SGKNWQALVQEAIGVMRNLNRSP-SGE 175 (327)
T ss_dssp SCEECCCCT----------TCSSCEEEEEEEETTEEEEEET-TCCEEEESS--TTSSEEEEECSCCCCEEEEEECT-TSC
T ss_pred CceECcccc----------CCCCCeEEEEEECCCCEEEEeC-CccEEEEcC--CCCCCEEeecCCCcceEEEEEcC-CCc
Confidence 111111100 0011245677666666666554 55443 223 232222 2233445678889987 455
Q ss_pred EEEEEeCCCeEEEEeC--CCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccc----cccce
Q 021247 215 VLFSASDDTHVHMYDA--EGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTN----HTDQV 288 (315)
Q Consensus 215 ~l~s~~~d~~i~~wd~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~----~~~~v 288 (315)
+++.+...+..+..|. +.-+.+ -......+..+.++++++++ .++.+|.+++.+.+.++.+..+.. +...+
T Consensus 176 ~~~~g~~G~~~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~ 252 (327)
T 2xbg_A 176 YVAVSSRGSFYSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGF 252 (327)
T ss_dssp EEEEETTSSEEEEECTTCSSCEEE--ECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCE
T ss_pred EEEEECCCcEEEEeCCCCCceeEC--CCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcce
Confidence 6655544444444553 222222 22345668889999988755 455678887775443444443321 22358
Q ss_pred EEEEEeeCCCEEEEEeCCCcEE
Q 021247 289 WGVSFRPLGGRVVSVSDDKSIS 310 (315)
Q Consensus 289 ~~~~~s~~~~~l~s~~~d~~i~ 310 (315)
.++++.+++..++ ++.++.|.
T Consensus 253 ~~v~~~~~~~~~~-~g~~g~i~ 273 (327)
T 2xbg_A 253 LDLAYRTPNEVWL-AGGAGALL 273 (327)
T ss_dssp EEEEESSSSCEEE-EESTTCEE
T ss_pred EEEEecCCCEEEE-EeCCCeEE
Confidence 8999998776555 44566663
No 306
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.64 E-value=0.0092 Score=48.34 Aligned_cols=222 Identities=14% Similarity=0.160 Sum_probs=108.9
Q ss_pred cEEEEeeCC----CcEEEEcCCCCcceee--ccccccceEEEEeCCCCCEEEEeeCC-----CeEEEEECCCCceeEEee
Q 021247 31 ALLLTGSLD----ETVKLWRPDDMQLERT--NTGHCLGVVSVAAHPSGIIAASASLD-----SFVRVFDVDTNASIATLE 99 (315)
Q Consensus 31 ~~l~sgs~d----~~v~~w~~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~~~d-----~~i~~w~~~~~~~~~~~~ 99 (315)
.+++.|+.+ ..+..||+.+.+-... .+.....-..+.. ++.+++.|+.+ ..+.++|..+.+-...-.
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 94 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN 94 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence 366667654 3578888766542221 1111111111222 56777777755 358888887765332211
Q ss_pred CCc--ccEEEEEECCCCCeEEEEecCC-----CeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCE
Q 021247 100 ASP--SEVWQMQFDPKGTTLAVAGGGS-----ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRR 172 (315)
Q Consensus 100 ~~~--~~v~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 172 (315)
... ..-..+.+ + ..+++.|+.+ ..+.+||..+.+....-..+. .... ...+.+ +++.
T Consensus 95 ~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~-------~r~~----~~~~~~--~~~i 158 (302)
T 2xn4_A 95 MRDRRSTLGAAVL--N-GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNT-------RRSS----VGVGVV--GGLL 158 (302)
T ss_dssp CSSCCBSCEEEEE--T-TEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSS-------CCBS----CEEEEE--TTEE
T ss_pred CCccccceEEEEE--C-CEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCC-------cccC----ceEEEE--CCEE
Confidence 111 11112222 3 3455555543 357788887655443221111 1111 112222 5566
Q ss_pred EEEecCC-------CcEEEEEcccceeeee--ecCCccceEEEEEcCCCCcEEEEEeCC-----CeEEEEeCCCCeeEEE
Q 021247 173 IACGSMD-------GTISVFDVTRAKFLHH--LEGHFMPVRSLVYSPVDPRVLFSASDD-----THVHMYDAEGKSLVTA 238 (315)
Q Consensus 173 l~~~s~d-------g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~~ 238 (315)
++.|+.+ ..+..||+.+.+.... +.........+.+ ++++++.|+.+ ..+.+||.++.+-...
T Consensus 159 yv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 235 (302)
T 2xn4_A 159 YAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL---NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQV 235 (302)
T ss_dssp EEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEECCBSSSSBCCCEEEEETTTTEEEEE
T ss_pred EEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE---CCEEEEECCCCCCcccceEEEEeCCCCCEeeC
Confidence 6666542 3588999987765432 2111111122222 46777777754 3688999876543221
Q ss_pred --eecccccEEEEEEcCCCCeEEEEeCCC-----cEEEEecCcc
Q 021247 239 --MSGHASWVLSVDASPDGAAITTGSSDR-----TVKLWDLNMR 275 (315)
Q Consensus 239 --~~~~~~~i~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~ 275 (315)
+.........+. .++++++.|+.++ .|.+||..+.
T Consensus 236 ~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 236 ADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp CCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 111001111122 2567777777654 4788888754
No 307
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.57 E-value=0.021 Score=46.59 Aligned_cols=220 Identities=13% Similarity=0.128 Sum_probs=107.1
Q ss_pred EEEEeeCCCcEEEEcCCCCccee-eccccccceEEEEeCCCCCEEEEeeC----C-------CeEEEEECCCCceeEEee
Q 021247 32 LLLTGSLDETVKLWRPDDMQLER-TNTGHCLGVVSVAAHPSGIIAASASL----D-------SFVRVFDVDTNASIATLE 99 (315)
Q Consensus 32 ~l~sgs~d~~v~~w~~~~~~~~~-~~~~h~~~v~~~~~~~~g~~l~s~~~----d-------~~i~~w~~~~~~~~~~~~ 99 (315)
+++.|+ ..+..||+.+.+-.. ..+.............++.+++.|+. + ..+..+|..+.+-.. +.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-MP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-CC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-CC
Confidence 455566 578889987655221 11111111122233356777777773 1 127778887765322 21
Q ss_pred CCcccE---EEEEECCCCCeEEEEecCC--------CeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECC
Q 021247 100 ASPSEV---WQMQFDPKGTTLAVAGGGS--------ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP 168 (315)
Q Consensus 100 ~~~~~v---~~~~~~~~~~~~~~~~~~d--------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 168 (315)
..+.+- ..+.+ +..+++.|+.+ ..+.+||..+.+....-..+. ....+ +++. .
T Consensus 84 ~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~-------~r~~~-----~~~~-~ 147 (315)
T 4asc_A 84 PLPSPRCLFGLGEA---LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPY-------VVYGH-----TVLS-H 147 (315)
T ss_dssp CBSSCEESCEEEEE---TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSS-------CCBSC-----EEEE-E
T ss_pred CCCcchhceeEEEE---CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCC-------cccce-----eEEE-E
Confidence 111111 11222 34465666532 458889988755432211111 11111 2222 3
Q ss_pred CCCEEEEecC-C-----CcEEEEEcccceeeee--ecCCccceEEEEEcCCCCcEEEEEeCCC-----eEEEEeCCCCee
Q 021247 169 DGRRIACGSM-D-----GTISVFDVTRAKFLHH--LEGHFMPVRSLVYSPVDPRVLFSASDDT-----HVHMYDAEGKSL 235 (315)
Q Consensus 169 ~~~~l~~~s~-d-----g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~d~-----~i~~wd~~~~~~ 235 (315)
+++.++.|+. + ..+.+||+.+.+.... +.........+.+ ++++++.|+.++ .+.+||.++.+-
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH---DGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE---CCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 4566677765 2 3689999987765432 1111111122222 456777777543 588899877643
Q ss_pred EEE--eecccccEEEEEEcCCCCeEEEEeCCC--------------cEEEEecCcc
Q 021247 236 VTA--MSGHASWVLSVDASPDGAAITTGSSDR--------------TVKLWDLNMR 275 (315)
Q Consensus 236 ~~~--~~~~~~~i~~~~~~~~~~~l~s~~~d~--------------~i~iwd~~~~ 275 (315)
... +.........+.+ ++++++.|+.++ .|.+||+.+.
T Consensus 225 ~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 225 APFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp EEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred EECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 221 1111111111222 567777777642 3667777653
No 308
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.53 E-value=0.012 Score=47.72 Aligned_cols=218 Identities=17% Similarity=0.196 Sum_probs=104.5
Q ss_pred CEEEEeeCC----CeEEEEECCCCceeEEeeCCccc---EEEEEECCCCCeEEEEecCC-----CeEEEEecCCcceeee
Q 021247 73 IIAASASLD----SFVRVFDVDTNASIATLEASPSE---VWQMQFDPKGTTLAVAGGGS-----ASVKLWDTATWNLIAT 140 (315)
Q Consensus 73 ~~l~s~~~d----~~i~~w~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~~~~~~~~ 140 (315)
.+++.|+.+ ..+..+|+.+..-.. +...+.+ -..+.+ +..+++.|+.+ ..+.+||..+.+....
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQ-VAELPSRRCRAGMVYM---AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEE---TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeE-cccCCcccccceEEEE---CCEEEEEeCcCCCccccceEEECCCCCceeeC
Confidence 344444432 347778877664322 2111111 111222 34466666643 4588899877654432
Q ss_pred ecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCC-----cEEEEEcccceeeee--ecCCccceEEEEEcCCCC
Q 021247 141 LSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG-----TISVFDVTRAKFLHH--LEGHFMPVRSLVYSPVDP 213 (315)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg-----~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~ 213 (315)
-..+.+ ... ...+.+ +++.++.|+.++ .+.+||+.+.+.... +.........+.+ ++
T Consensus 93 ~~~p~~-------r~~----~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~ 156 (302)
T 2xn4_A 93 ANMRDR-------RST----LGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV---GG 156 (302)
T ss_dssp CCCSSC-------CBS----CEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE---TT
T ss_pred CCCCcc-------ccc----eEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE---CC
Confidence 221111 111 112222 566667776543 578899887765432 1111111112222 45
Q ss_pred cEEEEEeCC-------CeEEEEeCCCCeeEEE--eecccccEEEEEEcCCCCeEEEEeCC-----CcEEEEecCccc--e
Q 021247 214 RVLFSASDD-------THVHMYDAEGKSLVTA--MSGHASWVLSVDASPDGAAITTGSSD-----RTVKLWDLNMRA--A 277 (315)
Q Consensus 214 ~~l~s~~~d-------~~i~~wd~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~--~ 277 (315)
++++.|+.+ ..+.+||..+.+-... +.........+.+ ++++++.|+.+ ..+.+||..+.+ .
T Consensus 157 ~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 234 (302)
T 2xn4_A 157 LLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ 234 (302)
T ss_dssp EEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEE
T ss_pred EEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEee
Confidence 667766642 3488899876543221 1111111111222 56777777765 368889987542 2
Q ss_pred ehcccccccceEEEEEeeCCCEEEEEeCCC-----cEEEeec
Q 021247 278 MQSMTNHTDQVWGVSFRPLGGRVVSVSDDK-----SISLYEY 314 (315)
Q Consensus 278 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~-----~i~i~~~ 314 (315)
+..+.........+. .+++.++.||.++ .+.+||.
T Consensus 235 ~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 235 VADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp ECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEET
T ss_pred CCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcC
Confidence 332222111111222 3566667777654 4777765
No 309
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.53 E-value=0.022 Score=46.20 Aligned_cols=219 Identities=11% Similarity=0.104 Sum_probs=108.3
Q ss_pred CCEEEEeeC--CCeEEEEECCCCceeEEeeCCc---ccEEEEEECCCCCeEEEEecCC----CeEEEEecCCcceeeeec
Q 021247 72 GIIAASASL--DSFVRVFDVDTNASIATLEASP---SEVWQMQFDPKGTTLAVAGGGS----ASVKLWDTATWNLIATLS 142 (315)
Q Consensus 72 g~~l~s~~~--d~~i~~w~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~d----~~i~~~d~~~~~~~~~~~ 142 (315)
+.+++.|+. ...+..+|..+++-... ...+ ..-..+.+ +..+++.|+.+ ..+.+||..+.+....-.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDI-RCPFEKRRDAACVFW---DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEEC-CCCSCCCBSCEEEEE---TTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecC-CCCCcccceeEEEEE---CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC
Confidence 345555554 35688889887653321 1111 11112222 33466666644 678889988765543322
Q ss_pred CCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCC------CcEEEEEcccceeeee--ecCCccceEEEEEcCCCCc
Q 021247 143 IPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMD------GTISVFDVTRAKFLHH--LEGHFMPVRSLVYSPVDPR 214 (315)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~d------g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~ 214 (315)
.+.+ ... ...+.+ +++.++.|+.+ ..+.+||+.+.+.... +.........+.+ +++
T Consensus 88 ~p~~-------r~~----~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~ 151 (306)
T 3ii7_A 88 PPTP-------RDS----LAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA---NGL 151 (306)
T ss_dssp CSSC-------CBS----CEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTE
T ss_pred CCcc-------ccc----eeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE---CCE
Confidence 2111 111 112222 56666777654 4589999987765432 1111111122222 456
Q ss_pred EEEEEeC---------CCeEEEEeCCCCeeEEE--eecccccEEEEEEcCCCCeEEEEeCC-----CcEEEEecCccc--
Q 021247 215 VLFSASD---------DTHVHMYDAEGKSLVTA--MSGHASWVLSVDASPDGAAITTGSSD-----RTVKLWDLNMRA-- 276 (315)
Q Consensus 215 ~l~s~~~---------d~~i~~wd~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~-- 276 (315)
+++.|+. -..+.+||..+.+-... +......-..+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 152 iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~ 229 (306)
T 3ii7_A 152 IYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWK 229 (306)
T ss_dssp EEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEE
T ss_pred EEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEE
Confidence 6676653 34588999877643221 1111111111222 56677777654 357888887642
Q ss_pred eehcccccccceEEEEEeeCCCEEEEEeCC-----CcEEEeec
Q 021247 277 AMQSMTNHTDQVWGVSFRPLGGRVVSVSDD-----KSISLYEY 314 (315)
Q Consensus 277 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----~~i~i~~~ 314 (315)
.+..+.........+.+ ++..++.||.+ ..+.+||.
T Consensus 230 ~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~ 270 (306)
T 3ii7_A 230 MVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNT 270 (306)
T ss_dssp ECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEET
T ss_pred ECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcC
Confidence 33333222222223333 56666777754 45666664
No 310
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.49 E-value=0.028 Score=45.69 Aligned_cols=253 Identities=10% Similarity=0.158 Sum_probs=154.6
Q ss_pred CcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEE
Q 021247 40 ETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAV 119 (315)
Q Consensus 40 ~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 119 (315)
..|.+-|+.+.......+- ..-+.-.+|..+.++--+ ..+++++|+++.+.+...... .+|.--+|-.... +.+
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi---~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~~-L~l 122 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNT-VAL 122 (365)
T ss_dssp EEEEEEETTSTTSCEEEEC---CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSSE-EEE
T ss_pred CEEEEEECCCCCCcccccc---ccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCCe-EEE
Confidence 3677778766443222111 112334588888777554 678999999999888877653 5677777765443 444
Q ss_pred EecCCCeEEEEecCCc-ceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEec-------CCCcEEEEEcccce
Q 021247 120 AGGGSASVKLWDTATW-NLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS-------MDGTISVFDVTRAK 191 (315)
Q Consensus 120 ~~~~d~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s-------~dg~i~i~d~~~~~ 191 (315)
.. +..|.-|++... .+.+.+.-+. ......|..-..+++.+|++..+ ..|.+.+|..+++
T Consensus 123 VT--~taVyHWs~~~~s~P~kvFdR~~---------~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~- 190 (365)
T 2xzh_A 123 VT--DNAVYHWSMEGESQPVKMFDRHS---------SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK- 190 (365)
T ss_dssp EE--SSEEEEEESSTTCCCEEEEECCG---------GGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-
T ss_pred Ec--CCcEEEEcccCCCCCceeeecch---------hcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-
Confidence 33 468999998642 2222222111 01134577888899999876543 2367888988654
Q ss_pred eeeeecCCccceEEEEEcCC--CCcEEEEEeC---CCeEEEEeCCCC---e------eEEEe-e--cccccEEEEEEcCC
Q 021247 192 FLHHLEGHFMPVRSLVYSPV--DPRVLFSASD---DTHVHMYDAEGK---S------LVTAM-S--GHASWVLSVDASPD 254 (315)
Q Consensus 192 ~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~---d~~i~~wd~~~~---~------~~~~~-~--~~~~~i~~~~~~~~ 254 (315)
.-+.+.+|......+..... ...++.-+.. .+++++-++... . .+... . ...+...++..++.
T Consensus 191 ~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~k 270 (365)
T 2xzh_A 191 VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK 270 (365)
T ss_dssp EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETT
T ss_pred ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEeccc
Confidence 34567777665544444321 1223333332 258899887321 1 11111 1 12455678888888
Q ss_pred CCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEE
Q 021247 255 GAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSIS 310 (315)
Q Consensus 255 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~ 310 (315)
-..+..-.+-|.|.++|+.++..+..-.--.+.|...+-+....=++.....|.|.
T Consensus 271 ygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl 326 (365)
T 2xzh_A 271 HDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL 326 (365)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEE
T ss_pred CCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEE
Confidence 78888889999999999999988765444456666555555545566666666554
No 311
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.49 E-value=0.033 Score=46.40 Aligned_cols=230 Identities=12% Similarity=0.076 Sum_probs=123.9
Q ss_pred ceEEEEeCCCCCEEEEeeCCCeEEEEECCCCc-eeEEee---CCcccEEEEEECCC---CCeEEEEecC---C----CeE
Q 021247 62 GVVSVAAHPSGIIAASASLDSFVRVFDVDTNA-SIATLE---ASPSEVWQMQFDPK---GTTLAVAGGG---S----ASV 127 (315)
Q Consensus 62 ~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~~~~~~~~---d----~~i 127 (315)
....+.+.|+|.++++ ..++.|++++. ++. .+..+. ........++++|+ +..++++-.. + ..|
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 4678899999986665 55699999873 443 222211 12345789999997 5556555432 3 456
Q ss_pred EEEecCCc--ce--eee-ec-CCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecC-------------CCcEEEEEcc
Q 021247 128 KLWDTATW--NL--IAT-LS-IPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSM-------------DGTISVFDVT 188 (315)
Q Consensus 128 ~~~d~~~~--~~--~~~-~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~-------------dg~i~i~d~~ 188 (315)
..++.... .. ... +. ++. ........++|.|+|.+.++.+. .|.|.-++..
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~----------~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d 177 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPG----------AYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE 177 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEEC----------CSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT
T ss_pred EEEEECCCCcCcCccEEEEEcCCC----------CCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC
Confidence 66765432 11 011 10 110 01112457999999986665332 2456666653
Q ss_pred cc--------eeeeeecCCccceEEEEEcCCCCcEEEEEeCCC---eEEEEeCCC----------------CeeEEEeec
Q 021247 189 RA--------KFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT---HVHMYDAEG----------------KSLVTAMSG 241 (315)
Q Consensus 189 ~~--------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~---~i~~wd~~~----------------~~~~~~~~~ 241 (315)
.. ....-..++. ....++|+|.+++++++-.... .|.+...-. ...+..+..
T Consensus 178 G~~p~~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~ 256 (354)
T 3a9g_A 178 GRPPADNPFPNSPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGS 256 (354)
T ss_dssp SCCCTTSSSTTCCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTT
T ss_pred CCCCCCCCCCCCcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCC
Confidence 21 0001112332 3457889985566555543322 233332110 011112211
Q ss_pred ccccEEEEEE-------cCCCCeEEEEeCCCcEEEEecCcc-cee--hcc-cccccceEEEEEeeCCCEEEEEe
Q 021247 242 HASWVLSVDA-------SPDGAAITTGSSDRTVKLWDLNMR-AAM--QSM-TNHTDQVWGVSFRPLGGRVVSVS 304 (315)
Q Consensus 242 ~~~~i~~~~~-------~~~~~~l~s~~~d~~i~iwd~~~~-~~~--~~~-~~~~~~v~~~~~s~~~~~l~s~~ 304 (315)
....+..+.+ ..+|.++++.-..+.|...+++.. +.. ..+ .+....+..+++.|||...++..
T Consensus 257 ~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 257 ETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 1234677888 356777777777778888888753 221 122 22235788999999997666654
No 312
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.45 E-value=0.037 Score=45.96 Aligned_cols=187 Identities=13% Similarity=0.148 Sum_probs=108.6
Q ss_pred ceEEEEeCCCCCEEEEe------------eCCCeEEEEECCCC-ceeEE--eeC-----CcccEEEEEECC--CCC-eEE
Q 021247 62 GVVSVAAHPSGIIAASA------------SLDSFVRVFDVDTN-ASIAT--LEA-----SPSEVWQMQFDP--KGT-TLA 118 (315)
Q Consensus 62 ~v~~~~~~~~g~~l~s~------------~~d~~i~~w~~~~~-~~~~~--~~~-----~~~~v~~~~~~~--~~~-~~~ 118 (315)
+.-.+...|+|..++++ ..+|.|.++|+++. ..... +.. ..-....+.+.+ ++. +++
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 44566678888776665 27899999998742 11222 222 112455666644 343 455
Q ss_pred EEecC--CCeEEEEecCCcce----eeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEec---------------
Q 021247 119 VAGGG--SASVKLWDTATWNL----IATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS--------------- 177 (315)
Q Consensus 119 ~~~~~--d~~i~~~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s--------------- 177 (315)
++... +.++.+|++..... +..+.. . .-...+.+++.++|...++..
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g--~----------~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~ 198 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH--K----------LLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHL 198 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECC--T----------TCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEecccc--C----------CCCCCceEEEeCCCCEEecCCcEeCCcccccchhhc
Confidence 55443 56788877654321 111211 0 112367889999988766643
Q ss_pred --CCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCC-Cee--EEEeecccccEEEEEEc
Q 021247 178 --MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG-KSL--VTAMSGHASWVLSVDAS 252 (315)
Q Consensus 178 --~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-~~~--~~~~~~~~~~i~~~~~~ 252 (315)
..|.++.+|.. + ...+.......+.++|+|++..++++-+..+.|..|+... +++ ...+ ...+..-.++++
T Consensus 199 ~~~~g~vyr~d~~--~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD 274 (355)
T 3sre_A 199 GLAWSFVTYYSPN--D-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVD 274 (355)
T ss_dssp TCCCEEEEEECTT--C-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEEC
T ss_pred cCCccEEEEEECC--e-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEe
Confidence 13556666653 2 2222222345689999996666777777889999999763 322 1222 224556788999
Q ss_pred C-CCCeEEEEeCC
Q 021247 253 P-DGAAITTGSSD 264 (315)
Q Consensus 253 ~-~~~~l~s~~~d 264 (315)
+ +|.+.+++..+
T Consensus 275 ~e~G~lwva~~~~ 287 (355)
T 3sre_A 275 PVTGDLWVGCHPN 287 (355)
T ss_dssp TTTCCEEEEEESC
T ss_pred CCCCcEEEEecCC
Confidence 9 58877766544
No 313
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.44 E-value=0.038 Score=45.95 Aligned_cols=228 Identities=17% Similarity=0.228 Sum_probs=113.9
Q ss_pred cceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcce--eec---cccccceEEEEeCCC----CCEEEEeeCC----
Q 021247 15 ESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLE--RTN---TGHCLGVVSVAAHPS----GIIAASASLD---- 81 (315)
Q Consensus 15 ~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~--~~~---~~h~~~v~~~~~~~~----g~~l~s~~~d---- 81 (315)
...++++|.|++. ++.+..+|.|++++ + .+.. ... .........++++|+ +.+.++-...
T Consensus 31 ~~P~~ia~~pdG~-----l~V~e~~g~I~~i~-~-g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~ 103 (352)
T 2ism_A 31 EVPWALAFLPDGG-----MLIAERPGRIRLFR-E-GRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL 103 (352)
T ss_dssp SCEEEEEECTTSC-----EEEEETTTEEEEEE-T-TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred CCceEEEEcCCCe-----EEEEeCCCeEEEEE-C-CCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence 3567899988764 55566779999997 2 2211 111 112346789999998 5555554432
Q ss_pred -CeEEEEECCCCc-----ee-EEeeC---CcccEEEEEECCCCCeEEEEecCC-------------CeEEEEecCCccee
Q 021247 82 -SFVRVFDVDTNA-----SI-ATLEA---SPSEVWQMQFDPKGTTLAVAGGGS-------------ASVKLWDTATWNLI 138 (315)
Q Consensus 82 -~~i~~w~~~~~~-----~~-~~~~~---~~~~v~~~~~~~~~~~~~~~~~~d-------------~~i~~~d~~~~~~~ 138 (315)
..|..++...+. .+ ..+.. .......++|.|+|. ++++.+.. +.|.-++... +
T Consensus 104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG-~-- 179 (352)
T 2ism_A 104 RNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLASLGGKILRLTPEG-E-- 179 (352)
T ss_dssp EEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTCSSSEEEEECTTS-S--
T ss_pred ccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCCCceEEEEEcCCC-C--
Confidence 567778876432 11 11221 111235789999986 44543321 3344444321 0
Q ss_pred eeecCCCCCCC------CCCc-cCCCCcceEEEEECC-CCCEEEEecCCCc--------EEEEEccc-------------
Q 021247 139 ATLSIPRPEGL------KPTD-KSSSKKFVLSVAWSP-DGRRIACGSMDGT--------ISVFDVTR------------- 189 (315)
Q Consensus 139 ~~~~~~~~~~~------~~~~-~~~~~~~i~~~~~~~-~~~~l~~~s~dg~--------i~i~d~~~------------- 189 (315)
++..... .... ...+ .....++|+| +++.+++-..... |.+.....
T Consensus 180 ----~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~ 254 (352)
T 2ism_A 180 ----PAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGND 254 (352)
T ss_dssp ----BCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCC
T ss_pred ----CCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCC
Confidence 0000000 0000 0011 1245789999 5665554332222 33332111
Q ss_pred ---ceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe----e--EEEeecccccEEEEEEcCCCCeEEE
Q 021247 190 ---AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKS----L--VTAMSGHASWVLSVDASPDGAAITT 260 (315)
Q Consensus 190 ---~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~----~--~~~~~~~~~~i~~~~~~~~~~~l~s 260 (315)
......+. +......++|. ++.++++....+.|...+++... . ...+......+..+++.|+|.+.++
T Consensus 255 ~~~~~p~~~~~-~~~ap~G~~~~--~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~ 331 (352)
T 2ism_A 255 PRYRDPLYFWP-QGFPPGNLAFF--RGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVT 331 (352)
T ss_dssp TTSCCCSEECT-TCCCEEEEEEE--TTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEE
T ss_pred CCCcCCeEecC-CCCCCcceEEE--CCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEE
Confidence 00111221 12234566763 45666666667777777665321 1 1122122356888999999876655
Q ss_pred E
Q 021247 261 G 261 (315)
Q Consensus 261 ~ 261 (315)
.
T Consensus 332 ~ 332 (352)
T 2ism_A 332 T 332 (352)
T ss_dssp E
T ss_pred E
Confidence 4
No 314
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.37 E-value=0.026 Score=46.00 Aligned_cols=210 Identities=13% Similarity=0.078 Sum_probs=98.3
Q ss_pred EEEEeeCCCeEEEEECCCCceeEE-eeCCcccEEEEEECCCCCeEEEEecC-------C----CeEEEEecCCcceeeee
Q 021247 74 IAASASLDSFVRVFDVDTNASIAT-LEASPSEVWQMQFDPKGTTLAVAGGG-------S----ASVKLWDTATWNLIATL 141 (315)
Q Consensus 74 ~l~s~~~d~~i~~w~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~-------d----~~i~~~d~~~~~~~~~~ 141 (315)
+++.|+ ..+..+|..+++-... ...............++. +++.|+. . ..+.+||..+.+....-
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQ-VFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCC-EEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCE-EEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 344454 5688999988764321 111111111222223444 4444542 1 12778888775543221
Q ss_pred cCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCC--------CcEEEEEcccceeeee--ecCCccceEEEEEcCC
Q 021247 142 SIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMD--------GTISVFDVTRAKFLHH--LEGHFMPVRSLVYSPV 211 (315)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~d--------g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~ 211 (315)
..+. ....+ ..+.+ +++.++.|+.+ ..+.+||+.+.+.... +.........+. .
T Consensus 84 ~~p~-------~r~~~----~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~---~ 147 (315)
T 4asc_A 84 PLPS-------PRCLF----GLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS---H 147 (315)
T ss_dssp CBSS-------CEESC----EEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE---E
T ss_pred CCCc-------chhce----eEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE---E
Confidence 1111 11111 12222 55666666632 3589999987764332 111111112222 2
Q ss_pred CCcEEEEEeC-C-----CeEEEEeCCCCeeEE--EeecccccEEEEEEcCCCCeEEEEeCCC-----cEEEEecCccc--
Q 021247 212 DPRVLFSASD-D-----THVHMYDAEGKSLVT--AMSGHASWVLSVDASPDGAAITTGSSDR-----TVKLWDLNMRA-- 276 (315)
Q Consensus 212 ~~~~l~s~~~-d-----~~i~~wd~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~-- 276 (315)
++++++.|+. + ..+.+||..+.+-.. .+......-..+.+ ++++++.|+.++ .+.+||..+.+
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence 4567777775 2 358899987653222 11111111111222 567778887655 47788886542
Q ss_pred eehcccccccceEEEEEeeCCCEEEEEeCC
Q 021247 277 AMQSMTNHTDQVWGVSFRPLGGRVVSVSDD 306 (315)
Q Consensus 277 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 306 (315)
.+..+.........+. -+++.++.||.+
T Consensus 226 ~~~~~p~~r~~~~~~~--~~~~l~v~GG~~ 253 (315)
T 4asc_A 226 PFEAFPQERSSLSLVS--LVGTLYAIGGFA 253 (315)
T ss_dssp EECCCSSCCBSCEEEE--ETTEEEEEEEEE
T ss_pred ECCCCCCcccceeEEE--ECCEEEEECCcc
Confidence 2322222111222222 255666677653
No 315
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.34 E-value=0.051 Score=45.19 Aligned_cols=237 Identities=11% Similarity=0.092 Sum_probs=123.1
Q ss_pred ceEEEEeCCCCC-EEEEeeCCCeEEEEECCCCceeEEe-------eCCcccEEEEEECCC---CCeEEEEecC-------
Q 021247 62 GVVSVAAHPSGI-IAASASLDSFVRVFDVDTNASIATL-------EASPSEVWQMQFDPK---GTTLAVAGGG------- 123 (315)
Q Consensus 62 ~v~~~~~~~~g~-~l~s~~~d~~i~~w~~~~~~~~~~~-------~~~~~~v~~~~~~~~---~~~~~~~~~~------- 123 (315)
....+.+.|+|. +++ +...+.|++++.. +.....+ .........++++|+ +..++++-..
T Consensus 19 ~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLI-TLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SEEEEEECSTTCCEEE-EETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CcEEEEEcCCCCEEEE-EeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 457899999998 665 4567899999853 3211111 112234688999996 5556555322
Q ss_pred CCeEEEEecCCc--ce--eeee--cCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecC-------------CCcEEE
Q 021247 124 SASVKLWDTATW--NL--IATL--SIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSM-------------DGTISV 184 (315)
Q Consensus 124 d~~i~~~d~~~~--~~--~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~-------------dg~i~i 184 (315)
...|..++.... +. ...+ .++.. .........++|.|+|.+.++.+. .|.|.-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~--------~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~r 168 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKL--------STGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVR 168 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCC--------BSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEE
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCC--------CCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEE
Confidence 224555555322 11 1111 01100 001122457999999965555432 246777
Q ss_pred EEcccce------------eeeee-cCCccceEEEEEcCCCCcEEEEEeC-CC--eEEEEeCCC----------------
Q 021247 185 FDVTRAK------------FLHHL-EGHFMPVRSLVYSPVDPRVLFSASD-DT--HVHMYDAEG---------------- 232 (315)
Q Consensus 185 ~d~~~~~------------~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~-d~--~i~~wd~~~---------------- 232 (315)
++....- ....+ .++ .....++|.|..++++++-.. ++ .|.+...-.
T Consensus 169 i~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~ 247 (353)
T 2g8s_A 169 LTDQGEIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGF 247 (353)
T ss_dssp EETTSCCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSS
T ss_pred ECCCCCCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCC
Confidence 7764320 11111 223 345788999855555544322 11 222211000
Q ss_pred -------------CeeEEEeecccccEEEEEEcC-------CCCeEEEEeCCCcEEEEecCccceehc---ccccccceE
Q 021247 233 -------------KSLVTAMSGHASWVLSVDASP-------DGAAITTGSSDRTVKLWDLNMRAAMQS---MTNHTDQVW 289 (315)
Q Consensus 233 -------------~~~~~~~~~~~~~i~~~~~~~-------~~~~l~s~~~d~~i~iwd~~~~~~~~~---~~~~~~~v~ 289 (315)
...+..+. +...+..+.+.. ++.++++.-..+.|...+++.++.... +......+.
T Consensus 248 ~~~~~~~~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~ 326 (353)
T 2g8s_A 248 KIPEAKGEIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIR 326 (353)
T ss_dssp CCTTCCBSSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEE
T ss_pred ccCcccCCCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCcee
Confidence 00011111 223566777753 467777777778888887765433221 122234788
Q ss_pred EEEEeeCCCEEEEEe-CCCcEE
Q 021247 290 GVSFRPLGGRVVSVS-DDKSIS 310 (315)
Q Consensus 290 ~~~~s~~~~~l~s~~-~d~~i~ 310 (315)
.+++.|+|...++.. .+|.|.
T Consensus 327 ~v~~~pdG~lyv~td~~~g~I~ 348 (353)
T 2g8s_A 327 DVRTGPDGYLYVLTDESSGELL 348 (353)
T ss_dssp EEEECTTSCEEEEECSTTEEEE
T ss_pred EEEECCCCcEEEEEeCCCCEEE
Confidence 999999998665433 455543
No 316
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.27 E-value=0.03 Score=45.47 Aligned_cols=221 Identities=13% Similarity=0.132 Sum_probs=106.1
Q ss_pred CCCCEEEEeeCC----CeEEEEECCCCceeEEeeCCcc---cEEEEEECCCCCeEEEEecC----C-----CeEEEEecC
Q 021247 70 PSGIIAASASLD----SFVRVFDVDTNASIATLEASPS---EVWQMQFDPKGTTLAVAGGG----S-----ASVKLWDTA 133 (315)
Q Consensus 70 ~~g~~l~s~~~d----~~i~~w~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~----d-----~~i~~~d~~ 133 (315)
-++.+++.|+.+ ..+.++|..+.+-... ...+. .-..+.+ +..+++.|+. + ..+.+||..
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~~d~~ 98 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRL-ADLQVPRSGLAGCVV---GGLLYAVGGRNNSPDGNTDSSALDCYNPM 98 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEEC-CCCSSCCBSCEEEEE---TTEEEEECCEEEETTEEEECCCEEEEETT
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeEC-CCCCcccccceEEEE---CCEEEEECCCcCCCCCCeecceEEEECCC
Confidence 345555555532 3577888776653221 11111 1111222 3445566654 2 467888887
Q ss_pred CcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCC-----CcEEEEEcccceeeee--ecCCccceEEE
Q 021247 134 TWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMD-----GTISVFDVTRAKFLHH--LEGHFMPVRSL 206 (315)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~d-----g~i~i~d~~~~~~~~~--~~~~~~~v~~~ 206 (315)
+.+....-..+. .... ...+.+ +++.++.|+.+ ..+.+||+.+.+.... +.........+
T Consensus 99 ~~~W~~~~~~p~-------~r~~----~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 165 (308)
T 1zgk_A 99 TNQWSPCAPMSV-------PRNR----IGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVA 165 (308)
T ss_dssp TTEEEECCCCSS-------CCBT----CEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEE
T ss_pred CCeEeECCCCCc-------Cccc----cEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEE
Confidence 755433211111 1111 122222 56666776643 3588999987765432 11111111222
Q ss_pred EEcCCCCcEEEEEeCC-----CeEEEEeCCCCeeEEE--eecccccEEEEEEcCCCCeEEEEeCC-----CcEEEEecCc
Q 021247 207 VYSPVDPRVLFSASDD-----THVHMYDAEGKSLVTA--MSGHASWVLSVDASPDGAAITTGSSD-----RTVKLWDLNM 274 (315)
Q Consensus 207 ~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~ 274 (315)
.+ ++.+++.|+.+ ..+.+||..+.+-... +......-..+.+ ++++++.|+.+ ..+.+||+.+
T Consensus 166 ~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~ 240 (308)
T 1zgk_A 166 VL---NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVET 240 (308)
T ss_dssp EE---TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred EE---CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCC
Confidence 22 45677777654 4588899876543221 1111111112222 56777777765 4588999876
Q ss_pred cc--eehcccccccceEEEEEeeCCCEEEEEeCC-----CcEEEeec
Q 021247 275 RA--AMQSMTNHTDQVWGVSFRPLGGRVVSVSDD-----KSISLYEY 314 (315)
Q Consensus 275 ~~--~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----~~i~i~~~ 314 (315)
.+ .+..+.........+. -+++.++.||.+ ..+.+||.
T Consensus 241 ~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~ 285 (308)
T 1zgk_A 241 ETWTFVAPMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDP 285 (308)
T ss_dssp TEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEET
T ss_pred CcEEECCCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcC
Confidence 43 2222222111222222 255666777654 34566664
No 317
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.21 E-value=0.027 Score=45.71 Aligned_cols=221 Identities=15% Similarity=0.137 Sum_probs=107.0
Q ss_pred cEEEEeeCC----CcEEEEcCCCCcceee--ccccccceEEEEeCCCCCEEEEeeC----C-----CeEEEEECCCCcee
Q 021247 31 ALLLTGSLD----ETVKLWRPDDMQLERT--NTGHCLGVVSVAAHPSGIIAASASL----D-----SFVRVFDVDTNASI 95 (315)
Q Consensus 31 ~~l~sgs~d----~~v~~w~~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~~~----d-----~~i~~w~~~~~~~~ 95 (315)
.+++.|+.+ ..+.+||+.+.+-... .+.....-..+.. ++.+++.|+. + ..+.++|+.+.+-.
T Consensus 26 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~ 103 (308)
T 1zgk_A 26 LIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWS 103 (308)
T ss_dssp CEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTEEE
T ss_pred EEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCeEe
Confidence 466667642 3678888766542221 1111111111222 5667777765 2 45788888776532
Q ss_pred EEeeCC--cccEEEEEECCCCCeEEEEecCC-----CeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECC
Q 021247 96 ATLEAS--PSEVWQMQFDPKGTTLAVAGGGS-----ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP 168 (315)
Q Consensus 96 ~~~~~~--~~~v~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 168 (315)
..-... ...-..+.+ + ..+++.|+.+ ..+.+||..+.+....-..+. .... -..+.+
T Consensus 104 ~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-------~r~~----~~~~~~-- 167 (308)
T 1zgk_A 104 PCAPMSVPRNRIGVGVI--D-GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLT-------RRIG----VGVAVL-- 167 (308)
T ss_dssp ECCCCSSCCBTCEEEEE--T-TEEEEECCEETTEECCCEEEEETTTTEEEECCCCSS-------CCBS----CEEEEE--
T ss_pred ECCCCCcCccccEEEEE--C-CEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCc-------cccc----eEEEEE--
Confidence 211111 111112222 3 3455555533 467888887655433221111 1111 122222
Q ss_pred CCCEEEEecCC-----CcEEEEEcccceeeee--ecCCccceEEEEEcCCCCcEEEEEeCC-----CeEEEEeCCCCeeE
Q 021247 169 DGRRIACGSMD-----GTISVFDVTRAKFLHH--LEGHFMPVRSLVYSPVDPRVLFSASDD-----THVHMYDAEGKSLV 236 (315)
Q Consensus 169 ~~~~l~~~s~d-----g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~ 236 (315)
+++.++.|+.+ ..+.+||+.+.+.... +.........+.+ ++++++.|+.+ ..+.+||+++.+-.
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL---HNCIYAAGGYDGQDQLNSVERYDVETETWT 244 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE---CCEEEEEeCCCCCCccceEEEEeCCCCcEE
Confidence 56666777654 4589999987765432 1111111122222 56677777654 45889998775432
Q ss_pred EE--eecccccEEEEEEcCCCCeEEEEeCC-----CcEEEEecCc
Q 021247 237 TA--MSGHASWVLSVDASPDGAAITTGSSD-----RTVKLWDLNM 274 (315)
Q Consensus 237 ~~--~~~~~~~i~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~ 274 (315)
.. +.........+.+ ++++++.|+.+ ..+.+||..+
T Consensus 245 ~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 245 FVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp ECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred ECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCC
Confidence 21 1111111111222 56677777754 3466777764
No 318
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.18 E-value=0.068 Score=43.56 Aligned_cols=209 Identities=14% Similarity=0.122 Sum_probs=96.0
Q ss_pred EEEEeeCCCeEEEEECCCCceeEE-eeC-CcccEEEEEECCCCCeEEEEecC----CC-------eEEEEecCCcceeee
Q 021247 74 IAASASLDSFVRVFDVDTNASIAT-LEA-SPSEVWQMQFDPKGTTLAVAGGG----SA-------SVKLWDTATWNLIAT 140 (315)
Q Consensus 74 ~l~s~~~d~~i~~w~~~~~~~~~~-~~~-~~~~v~~~~~~~~~~~~~~~~~~----d~-------~i~~~d~~~~~~~~~ 140 (315)
+++.|+. .+..+|..+++-... ... .+..-.++. ..++. +++.|+. ++ .+.+||..+.+....
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~-~~~~~-lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 93 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIV-TQQNQ-VYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGL 93 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEE-CSSSC-EEEEESSCC-------CCCBEEEEEETTTTEEEEC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEE-EECCE-EEEECCcccCccccCCCccccEEEEeCCCCcEEEC
Confidence 3444443 378889887764331 111 111122222 23444 5555552 11 277788876554332
Q ss_pred ecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCC-------CcEEEEEcccceeeee--ecCCccceEEEEEcCC
Q 021247 141 LSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMD-------GTISVFDVTRAKFLHH--LEGHFMPVRSLVYSPV 211 (315)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~d-------g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~ 211 (315)
-..+. .... ...+.+ +++.++.|+.+ ..+.+||+.+.+.... +.........+. .
T Consensus 94 ~~~p~-------~r~~----~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~---~ 157 (318)
T 2woz_A 94 PPLPS-------ARCL----FGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS---H 157 (318)
T ss_dssp SCBSS-------CBCS----CEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE---E
T ss_pred CCCCc-------cccc----cceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE---E
Confidence 11111 1111 112222 46666666643 3588899887765432 111111111122 2
Q ss_pred CCcEEEEEeC------CCeEEEEeCCCCeeEEE--eecccccEEEEEEcCCCCeEEEEeCCC-----cEEEEecCccc--
Q 021247 212 DPRVLFSASD------DTHVHMYDAEGKSLVTA--MSGHASWVLSVDASPDGAAITTGSSDR-----TVKLWDLNMRA-- 276 (315)
Q Consensus 212 ~~~~l~s~~~------d~~i~~wd~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~-- 276 (315)
++.+++.|+. -..+.+||..+.+-... +.........+. -++++++.|+.++ .+.+||+.+.+
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWE 235 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEE
Confidence 5567777764 23588999887643221 111111111122 2567777776543 46678876543
Q ss_pred eehcccccccceEEEEEeeCCCEEEEEeCC
Q 021247 277 AMQSMTNHTDQVWGVSFRPLGGRVVSVSDD 306 (315)
Q Consensus 277 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 306 (315)
.+..++........+ ..++..++.||.+
T Consensus 236 ~~~~~p~~r~~~~~~--~~~~~i~v~GG~~ 263 (318)
T 2woz_A 236 VMTEFPQERSSISLV--SLAGSLYAIGGFA 263 (318)
T ss_dssp ECCCCSSCCBSCEEE--EETTEEEEECCBC
T ss_pred ECCCCCCcccceEEE--EECCEEEEECCee
Confidence 233232222122222 2345566676654
No 319
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.17 E-value=0.2 Score=48.62 Aligned_cols=140 Identities=15% Similarity=0.187 Sum_probs=83.5
Q ss_pred CCEEEEec----------CCCcEEEEEcccceeeeee-cCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEE
Q 021247 170 GRRIACGS----------MDGTISVFDVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTA 238 (315)
Q Consensus 170 ~~~l~~~s----------~dg~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~ 238 (315)
..+|++|+ ..|.|++|++..++..... ....++++++.-. +++++++. ..+|++|++...+.+..
T Consensus 844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~--~g~Lla~i--g~~l~vy~l~~~~~L~~ 919 (1158)
T 3ei3_A 844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF--NGKLLASI--NSTVRLYEWTTEKELRT 919 (1158)
T ss_dssp CCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE--TTEEEEEE--TTEEEEEEECTTSCEEE
T ss_pred CEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee--CCEEEEEc--CCEEEEEECCCCceEEE
Confidence 45777776 3578999998644332111 1235677877643 45544433 46899999876543331
Q ss_pred eecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCcc-ceehcccc--cccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 239 MSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMR-AAMQSMTN--HTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 239 ~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
-..+-..|..+.....+.+++.|..-..|.+...+.. ..+..+.. +...++++.+-.+ ..++.+..+|+|.++.+
T Consensus 920 ~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~ 997 (1158)
T 3ei3_A 920 ECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQK 997 (1158)
T ss_dssp EEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEE
T ss_pred EeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEEEEec
Confidence 1111111333333335678888888888877654321 22333322 3457888888765 47788889999998865
No 320
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.15 E-value=0.036 Score=45.98 Aligned_cols=150 Identities=15% Similarity=0.146 Sum_probs=85.7
Q ss_pred EEEEECCCCCEEEEec------------CCCcEEEEEcccc--eee-eeecC-----CccceEEEEEcCC--CCcEEEEE
Q 021247 162 LSVAWSPDGRRIACGS------------MDGTISVFDVTRA--KFL-HHLEG-----HFMPVRSLVYSPV--DPRVLFSA 219 (315)
Q Consensus 162 ~~~~~~~~~~~l~~~s------------~dg~i~i~d~~~~--~~~-~~~~~-----~~~~v~~~~~~~~--~~~~l~s~ 219 (315)
..+...|+|..+++++ .+|.|.++|+.+. +.. -.+.+ .......+.+.++ +..+|+.+
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vv 132 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV 132 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEE
Confidence 3566778776655552 6899999998632 211 11222 1234566666542 22234444
Q ss_pred -eC--CCeEEEEeCCC--Ce--eEEEeecc-cccEEEEEEcCCCCeEEEEeC-----------------CCcEEEEecCc
Q 021247 220 -SD--DTHVHMYDAEG--KS--LVTAMSGH-ASWVLSVDASPDGAAITTGSS-----------------DRTVKLWDLNM 274 (315)
Q Consensus 220 -~~--d~~i~~wd~~~--~~--~~~~~~~~-~~~i~~~~~~~~~~~l~s~~~-----------------d~~i~iwd~~~ 274 (315)
.. +..+.+|+... .. .+..+.+. -...+++.+.++|++.++... .|.|..++.
T Consensus 133 nh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~-- 210 (355)
T 3sre_A 133 NHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-- 210 (355)
T ss_dssp ECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--
T ss_pred ECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--
Confidence 33 45677766543 32 22333332 245789999999987777541 234444443
Q ss_pred cceehcccccccceEEEEEeeCCCEEE-EEeCCCcEEEeec
Q 021247 275 RAAMQSMTNHTDQVWGVSFRPLGGRVV-SVSDDKSISLYEY 314 (315)
Q Consensus 275 ~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~d~~i~i~~~ 314 (315)
++ ...+...-...+.++||||++.|. +-+..++|..|++
T Consensus 211 ~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~ 250 (355)
T 3sre_A 211 ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEK 250 (355)
T ss_dssp TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEE
Confidence 32 222222234678999999998775 4456788988886
No 321
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.13 E-value=0.098 Score=44.34 Aligned_cols=253 Identities=10% Similarity=0.156 Sum_probs=153.8
Q ss_pred CcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEE
Q 021247 40 ETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAV 119 (315)
Q Consensus 40 ~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 119 (315)
..|.+-|+.+.......+- ..-+.-.+|..+.++--+ ..+++++|+++.+.+....... +|.--+|-.. +.+.+
T Consensus 48 ~~vvIiDl~~~~~~~rrpi---~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~-~~l~l 121 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISL-NTVAL 121 (494)
T ss_dssp CEEEEEETTSTTSCEEEEC---CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEET-TEEEE
T ss_pred CeEEEEECCCCCcceeccc---ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCC-CeEEE
Confidence 3677777765433221111 112445678777776554 6899999999998888776543 4555566543 33444
Q ss_pred EecCCCeEEEEecCCc-ceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEec-------CCCcEEEEEcccce
Q 021247 120 AGGGSASVKLWDTATW-NLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS-------MDGTISVFDVTRAK 191 (315)
Q Consensus 120 ~~~~d~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s-------~dg~i~i~d~~~~~ 191 (315)
. .+..|.-|++... .+.+.+.-+. ......|..-..+++.+|++..+ ..|.+.+|..+.+
T Consensus 122 V--T~taVyHWsi~~~s~P~kvFdR~~---------~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~- 189 (494)
T 1bpo_A 122 V--TDNAVYHWSMEGESQPVKMFDRHS---------SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK- 189 (494)
T ss_dssp E--CSSEEEEEESSSSCCCEEEEECCG---------GGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-
T ss_pred E--cCCeeEEecccCCCCchhheecch---------hcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-
Confidence 3 3568999998642 2222222111 01134578888899999886443 2467888987653
Q ss_pred eeeeecCCccceEEEEEcCC--CCcEEEEEeC---CCeEEEEeCCCC-----ee-EEEe------ecccccEEEEEEcCC
Q 021247 192 FLHHLEGHFMPVRSLVYSPV--DPRVLFSASD---DTHVHMYDAEGK-----SL-VTAM------SGHASWVLSVDASPD 254 (315)
Q Consensus 192 ~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~---d~~i~~wd~~~~-----~~-~~~~------~~~~~~i~~~~~~~~ 254 (315)
.-+.+.+|......+..... ...++.-+.. .+++++-++... .. .+.. ..-.+...++..++.
T Consensus 190 ~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~k 269 (494)
T 1bpo_A 190 VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK 269 (494)
T ss_dssp CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETT
T ss_pred ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEeccc
Confidence 34567788766555554321 1223443433 278999987432 01 1111 112455678888988
Q ss_pred CCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCcEE
Q 021247 255 GAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSIS 310 (315)
Q Consensus 255 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~ 310 (315)
-..+..-.+-|.|.++|+.++..+..-.--.+.|...+-+...+=++.....|.|.
T Consensus 270 ygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl 325 (494)
T 1bpo_A 270 HDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL 325 (494)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEE
T ss_pred CCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEE
Confidence 88888899999999999999988765444456666555555555566666666553
No 322
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.79 E-value=0.16 Score=41.33 Aligned_cols=220 Identities=12% Similarity=0.133 Sum_probs=103.8
Q ss_pred EEEEeeCCCcEEEEcCCCCcceee-ccccccceEEEEeCCCCCEEEEeeC----CC-------eEEEEECCCCceeEEee
Q 021247 32 LLLTGSLDETVKLWRPDDMQLERT-NTGHCLGVVSVAAHPSGIIAASASL----DS-------FVRVFDVDTNASIATLE 99 (315)
Q Consensus 32 ~l~sgs~d~~v~~w~~~~~~~~~~-~~~h~~~v~~~~~~~~g~~l~s~~~----d~-------~i~~w~~~~~~~~~~~~ 99 (315)
+++.|+. .+..||+.+.+-... ...............++.+++.|+. ++ .+..+|..+.+-.. +.
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~ 94 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVG-LP 94 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEE-CS
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEE-CC
Confidence 4555554 378898876653221 1110111122233456777777773 12 16778877664322 11
Q ss_pred CCcc---cEEEEEECCCCCeEEEEecCC-------CeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCC
Q 021247 100 ASPS---EVWQMQFDPKGTTLAVAGGGS-------ASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169 (315)
Q Consensus 100 ~~~~---~v~~~~~~~~~~~~~~~~~~d-------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 169 (315)
..+. .-..+.+ + ..+++.|+.+ ..+.+||..+.+....-..+. ....+ +++. .+
T Consensus 95 ~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-------~r~~~-----~~~~-~~ 158 (318)
T 2woz_A 95 PLPSARCLFGLGEV--D-DKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPI-------KVYGH-----NVIS-HN 158 (318)
T ss_dssp CBSSCBCSCEEEEE--T-TEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSS-------CEESC-----EEEE-ET
T ss_pred CCCccccccceEEE--C-CEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCC-------ccccc-----EEEE-EC
Confidence 1111 1112222 3 3455555543 357888887755443222111 11111 2222 35
Q ss_pred CCEEEEecC------CCcEEEEEcccceeeee--ecCCccceEEEEEcCCCCcEEEEEeCC-----CeEEEEeCCCCeeE
Q 021247 170 GRRIACGSM------DGTISVFDVTRAKFLHH--LEGHFMPVRSLVYSPVDPRVLFSASDD-----THVHMYDAEGKSLV 236 (315)
Q Consensus 170 ~~~l~~~s~------dg~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~ 236 (315)
++.++.|+. -..+.+||+.+.+.... +.........+.+ ++++++.|+.+ ..+.+||+++.+-.
T Consensus 159 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 159 GMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH---KGKIVIAGGVTEDGLSASVEAFDLKTNKWE 235 (318)
T ss_dssp TEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred CEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE---CCEEEEEcCcCCCCccceEEEEECCCCeEE
Confidence 666666653 23589999987765432 1111111122222 45677777643 34778998765322
Q ss_pred E--EeecccccEEEEEEcCCCCeEEEEeCC--------------CcEEEEecCcc
Q 021247 237 T--AMSGHASWVLSVDASPDGAAITTGSSD--------------RTVKLWDLNMR 275 (315)
Q Consensus 237 ~--~~~~~~~~i~~~~~~~~~~~l~s~~~d--------------~~i~iwd~~~~ 275 (315)
. .+....... ++. ..++++++.|+.+ ..+.+||+.+.
T Consensus 236 ~~~~~p~~r~~~-~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 236 VMTEFPQERSSI-SLV-SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp ECCCCSSCCBSC-EEE-EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred ECCCCCCcccce-EEE-EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 1 111111111 111 2246677777654 34677777653
No 323
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.78 E-value=0.12 Score=43.78 Aligned_cols=139 Identities=16% Similarity=0.191 Sum_probs=86.6
Q ss_pred CCCCEEEEecCCCcEEEEEcccceeeeeecCC----ccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCe---------
Q 021247 168 PDGRRIACGSMDGTISVFDVTRAKFLHHLEGH----FMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKS--------- 234 (315)
Q Consensus 168 ~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~--------- 234 (315)
.+|..++.. .++.||..++......+.+... ...+..+..+| .+.+|+..+ +..|.|-.+..+.
T Consensus 30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSp-sG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISST-SGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp TTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECT-TSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred cCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECC-CCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 345555444 3478888887644434444332 22577888898 555665554 4578887765211
Q ss_pred ---eEEEeec------ccccEEEEEEcCC---CCeEEEEeCCCcEEEEecCccc--eehcc---------cccccceEEE
Q 021247 235 ---LVTAMSG------HASWVLSVDASPD---GAAITTGSSDRTVKLWDLNMRA--AMQSM---------TNHTDQVWGV 291 (315)
Q Consensus 235 ---~~~~~~~------~~~~i~~~~~~~~---~~~l~s~~~d~~i~iwd~~~~~--~~~~~---------~~~~~~v~~~ 291 (315)
..+.+.- ....|..+.|+|- +..|++=..|+.||+||+.... +. .+ ......|.++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEE
Confidence 1112221 2467999999994 5688999999999999998521 11 11 1122578899
Q ss_pred EEeeCCCEEEEEe--CCCcEE
Q 021247 292 SFRPLGGRVVSVS--DDKSIS 310 (315)
Q Consensus 292 ~~s~~~~~l~s~~--~d~~i~ 310 (315)
+|..++-.|...+ ..|.|.
T Consensus 186 ~Fg~~~lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 186 EFSKDGLTLYCLNTTEGGDIF 206 (452)
T ss_dssp EECTTSSCEEEEECTTSCEEE
T ss_pred EEcCCCcEEEEEecCCCCCEE
Confidence 9999876666644 667664
No 324
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.70 E-value=0.24 Score=42.76 Aligned_cols=103 Identities=14% Similarity=0.198 Sum_probs=61.6
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEEccccee--eeeecC------CccceEEEEEcCC---CCcEEEEEeC--------
Q 021247 161 VLSVAWSPDGRRIACGSMDGTISVFDVTRAKF--LHHLEG------HFMPVRSLVYSPV---DPRVLFSASD-------- 221 (315)
Q Consensus 161 i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~--~~~~~~------~~~~v~~~~~~~~---~~~~l~s~~~-------- 221 (315)
...|+|.|+|+++++-...+.|++++...++. +..+.. .......++|+|+ ++.+.++-+.
T Consensus 29 P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~ 108 (454)
T 1cru_A 29 PHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDK 108 (454)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--C
T ss_pred ceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCcc
Confidence 57999999999777765555798887654433 222221 2345678999985 5656555542
Q ss_pred ----CCeEEEEeCCCC-------e-eEEEee-cccccEEEEEEcCCCCeEEEEeC
Q 021247 222 ----DTHVHMYDAEGK-------S-LVTAMS-GHASWVLSVDASPDGAAITTGSS 263 (315)
Q Consensus 222 ----d~~i~~wd~~~~-------~-~~~~~~-~~~~~i~~~~~~~~~~~l~s~~~ 263 (315)
...|..|+.... + ++..+. ........+.|.|+|.+.++.+.
T Consensus 109 ~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 109 ELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 235666654321 1 111122 11224678999999987766543
No 325
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.63 E-value=0.6 Score=45.83 Aligned_cols=251 Identities=10% Similarity=0.171 Sum_probs=137.7
Q ss_pred CcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEE
Q 021247 40 ETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAV 119 (315)
Q Consensus 40 ~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 119 (315)
.+|.|-|+.++......+ ...-+.-.+|..+.++--+ ..+++++|+++.+.+..... +.+|.--+|-.... +.+
T Consensus 48 ~~vvIidl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~~-l~l 121 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNT-VAL 121 (1630)
T ss_pred ceEEEEECCCCCCccccc---ccchhhccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCCe-eEE
Confidence 367777766543221111 1112334577777666443 67899999998887776654 34566667754433 333
Q ss_pred EecCCCeEEEEecCCcc-eeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEec-------CCCcEEEEEcccce
Q 021247 120 AGGGSASVKLWDTATWN-LIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS-------MDGTISVFDVTRAK 191 (315)
Q Consensus 120 ~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s-------~dg~i~i~d~~~~~ 191 (315)
. .+..|.-|++.... +...+. +... .....|..-..+++.+|++..+ ..|.+.+|..+.+.
T Consensus 122 V--T~~aVyHW~~~~~s~P~k~fd--R~~~-------L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~ 190 (1630)
T 1xi4_A 122 V--TDNAVYHWSMEGESQPVKMFD--RHSS-------LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV 190 (1630)
T ss_pred E--cCCeEEEeccCCCCccHHHHh--cchh-------cccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc
Confidence 3 24689999986411 111111 1100 1124477788888999876433 35778889876433
Q ss_pred eeeeecCCccceEEEEEc--CCCCcEEEEEeC---CCeEEEEeCCCC-----eeE-E---E-ee--cccccEEEEEEcCC
Q 021247 192 FLHHLEGHFMPVRSLVYS--PVDPRVLFSASD---DTHVHMYDAEGK-----SLV-T---A-MS--GHASWVLSVDASPD 254 (315)
Q Consensus 192 ~~~~~~~~~~~v~~~~~~--~~~~~~l~s~~~---d~~i~~wd~~~~-----~~~-~---~-~~--~~~~~i~~~~~~~~ 254 (315)
.+.+.||......+... +....++..+.. .+++++-++... ... + . +. .-.+...++..++.
T Consensus 191 -sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k 269 (1630)
T 1xi4_A 191 -SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK 269 (1630)
T ss_pred -chhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccc
Confidence 34455665544443332 112223332222 268888887432 110 0 0 11 12344557778887
Q ss_pred CCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEEEEeCCCc
Q 021247 255 GAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVVSVSDDKS 308 (315)
Q Consensus 255 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~ 308 (315)
-..+..-+.-|.|.++|+.++..+..-.--.+.|.-.+-+...+=++.....|.
T Consensus 270 ~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~ 323 (1630)
T 1xi4_A 270 HDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQ 323 (1630)
T ss_pred cCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCce
Confidence 778888899999999999998776543333344443333333223333334443
No 326
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.61 E-value=0.078 Score=43.96 Aligned_cols=61 Identities=10% Similarity=-0.012 Sum_probs=31.2
Q ss_pred EEEEeeC-CCcEEEEcCCC--Ccc--eeecc-ccccceEEEEeCCCCCEEEEeeC-C---------CeEEEEECCCCce
Q 021247 32 LLLTGSL-DETVKLWRPDD--MQL--ERTNT-GHCLGVVSVAAHPSGIIAASASL-D---------SFVRVFDVDTNAS 94 (315)
Q Consensus 32 ~l~sgs~-d~~v~~w~~~~--~~~--~~~~~-~h~~~v~~~~~~~~g~~l~s~~~-d---------~~i~~w~~~~~~~ 94 (315)
+++.|+. ...+..||+.+ .+- ....+ .....-..+.+ ++.+++.|+. + ..+.++|+.+.+-
T Consensus 22 iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 22 VYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp EEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred EEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 5566654 35688888753 221 11112 11111112222 5667777765 2 4588889887653
No 327
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.54 E-value=0.3 Score=41.31 Aligned_cols=162 Identities=12% Similarity=0.187 Sum_probs=94.2
Q ss_pred CCCCCEEEEeeCCCeEEEEECCCCceeEEeeCC----cccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCC
Q 021247 69 HPSGIIAASASLDSFVRVFDVDTNASIATLEAS----PSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIP 144 (315)
Q Consensus 69 ~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~ 144 (315)
..+|..++.+- ++.||.-++.++..-+.+... -..+..+..+|+|.++++.| +.+|.|-.+.....
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g--~~~V~Vv~LP~~~~------- 98 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN--DNEIFVMEVPWGYS------- 98 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC--SSEEEEEECCTTCS-------
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec--CCeEEEEEecCccc-------
Confidence 34555554433 467887787755444444432 23567788999999887764 45666665531000
Q ss_pred CCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCC--CcEEEEEeCC
Q 021247 145 RPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD--PRVLFSASDD 222 (315)
Q Consensus 145 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~d 222 (315)
. +.+..+ ..-=.++.|.+...+ .....+|..+.|+|.. +..|++-..|
T Consensus 99 -----------~-----------~~~~~~---~~~~q~~ty~l~~~~-----~~~~s~I~qVlWHPl~~~ds~LVVLtsD 148 (452)
T 3pbp_A 99 -----------N-----------VEDVSI---QDAFQIFHYSIDEEE-----VGPKSSIKKVLFHPKSYRDSCIVVLKED 148 (452)
T ss_dssp -----------C-----------CCCHHH---HHTTEEEEEEGGGCC-------CCCCEEEEEECTTBGGGCEEEEEETT
T ss_pred -----------c-----------Cccccc---ccccceeEEEcCCcc-----cCCCCceeEEEeccccCCCCeEEEEecC
Confidence 0 000000 000124445553211 1135689999999963 4489999999
Q ss_pred CeEEEEeCCCCe-eEEEe---------ecccccEEEEEEcCCCCeEEEEe--CCCcEEEE
Q 021247 223 THVHMYDAEGKS-LVTAM---------SGHASWVLSVDASPDGAAITTGS--SDRTVKLW 270 (315)
Q Consensus 223 ~~i~~wd~~~~~-~~~~~---------~~~~~~i~~~~~~~~~~~l~s~~--~d~~i~iw 270 (315)
+.|++||+.... ....+ ......|.+++|.+++-.|.... .+|.|+-.
T Consensus 149 ~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 149 DTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp SCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred CEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 999999987521 10112 12235688999999887776644 88888654
No 328
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.49 E-value=0.26 Score=39.95 Aligned_cols=186 Identities=9% Similarity=0.075 Sum_probs=95.9
Q ss_pred CCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCC-------------CeEEEEecCCcceeeeecCCCCC
Q 021247 81 DSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGS-------------ASVKLWDTATWNLIATLSIPRPE 147 (315)
Q Consensus 81 d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-------------~~i~~~d~~~~~~~~~~~~~~~~ 147 (315)
++.|...+...... ..+.. .. +--+++++..++.+...+ ..|+..++...+......
T Consensus 36 ~~~ly~~~~dg~~~-~~l~~--~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~----- 105 (302)
T 3s25_A 36 NGRLYAMNIDGSNI-HKLSN--DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP----- 105 (302)
T ss_dssp TTEEEEEETTSCSC-EEEEE--EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC-----
T ss_pred CceEEEEcCCCCCC-EEccC--Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec-----
Confidence 45566666544332 22221 11 234577888887776543 345656655433211110
Q ss_pred CCCCCccCCCCcceEEEEECCCCCEEEEec----CCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCC
Q 021247 148 GLKPTDKSSSKKFVLSVAWSPDGRRIACGS----MDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 223 (315)
Q Consensus 148 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s----~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~ 223 (315)
-.+..|++++++|+-.. .+..|+..++.... ...+..+.. ..++|.+..+..+.....
T Consensus 106 -------------~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~ 167 (302)
T 3s25_A 106 -------------DPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNG 167 (302)
T ss_dssp -------------SCEEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTC
T ss_pred -------------CCccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCc
Confidence 11346777888876543 34456666765332 333433322 345565666666665567
Q ss_pred eEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCC--CcEEEEecCccceehcccccccceEEEEEeeCCCEEE
Q 021247 224 HVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSD--RTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301 (315)
Q Consensus 224 ~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 301 (315)
.|.+-++.++.......+ ... ..+.|++.+|+=...+ ..|..-+++... ...+.. ..+ -.|+|++.+|.
T Consensus 168 ~Iy~~~l~g~~~~~l~~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~--~~~~~~g~~Iy 238 (302)
T 3s25_A 168 QLYRYDTASQSEALFYDC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE--ANI--EHYNVYGSLIF 238 (302)
T ss_dssp CEEEEETTTTEEEEEECS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC--SCE--EEEEEETTEEE
T ss_pred eEEEEECCCCCEEEEeCC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC--CCc--ceEEECCCEEE
Confidence 888888877654333322 122 2356888776554433 245555555433 222221 222 24778888776
Q ss_pred EE
Q 021247 302 SV 303 (315)
Q Consensus 302 s~ 303 (315)
-+
T Consensus 239 ~~ 240 (302)
T 3s25_A 239 YQ 240 (302)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 329
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.24 E-value=0.04 Score=45.37 Aligned_cols=124 Identities=12% Similarity=0.122 Sum_probs=73.0
Q ss_pred CEEEEeeCCCeEEEEECCCCceeEEeeCCc-ccEEEEEEC--CCCCeEEEEe-cCCCeEEEEecCCcceeeeecCCCCCC
Q 021247 73 IIAASASLDSFVRVFDVDTNASIATLEASP-SEVWQMQFD--PKGTTLAVAG-GGSASVKLWDTATWNLIATLSIPRPEG 148 (315)
Q Consensus 73 ~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~-~~v~~~~~~--~~~~~~~~~~-~~d~~i~~~d~~~~~~~~~~~~~~~~~ 148 (315)
.+++.++.||.|+-+|..+++....++... .++....-. +.+..+++.. ..||.+..+|..++.....+..+....
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 467788999999999999999888876541 222222111 1122344443 579999999988875554443321110
Q ss_pred CCCCccCCCCcceE-EEEECCCCCEEEEecCCCcEEEEEcccceeeeeecC
Q 021247 149 LKPTDKSSSKKFVL-SVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEG 198 (315)
Q Consensus 149 ~~~~~~~~~~~~i~-~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~ 198 (315)
..|... ...++. ..--...+..+++|+.+|.+...|+.+|+.+-.+..
T Consensus 91 ~SP~~~--~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 91 TSPLHL--KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp TCSEEE--ECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred cccccc--CCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 000000 000000 000001456889999999999999999998877653
No 330
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.19 E-value=0.44 Score=39.53 Aligned_cols=234 Identities=13% Similarity=0.151 Sum_probs=118.2
Q ss_pred cceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeec---cccccceEEEEeCCC----CCEEEEeeC---C---
Q 021247 15 ESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTN---TGHCLGVVSVAAHPS----GIIAASASL---D--- 81 (315)
Q Consensus 15 ~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~---~~h~~~v~~~~~~~~----g~~l~s~~~---d--- 81 (315)
...++++|.|++. |+.+..+|.|++++.+..+....+ .........++++|+ +.+.++-.. +
T Consensus 29 ~~P~~ia~~pdG~-----l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-----YLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEETTE-----EEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCeEEEEcCCCe-----EEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 4578999999764 666677799999974322111111 112346789999997 555555442 3
Q ss_pred -CeEEEEECCCCc-----e--e-EEeeCC-cccEEEEEECCCCCeEEEEecCC-------------CeEEEEecCCccee
Q 021247 82 -SFVRVFDVDTNA-----S--I-ATLEAS-PSEVWQMQFDPKGTTLAVAGGGS-------------ASVKLWDTATWNLI 138 (315)
Q Consensus 82 -~~i~~w~~~~~~-----~--~-~~~~~~-~~~v~~~~~~~~~~~~~~~~~~d-------------~~i~~~d~~~~~~~ 138 (315)
..|..++..... . + ..+... ......+.|.|+|. ++++.+.. +.|.-++... +
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG-~-- 179 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEEG-R-- 179 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTTS-C--
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCCC-C--
Confidence 567777766541 1 1 112211 11235688999987 44443321 2333333321 0
Q ss_pred eeecCCCCCCC--CCCccCCCCcceEEEEECC-CCCEEEEecCCC---cEEEEEcccc----------------eeeeee
Q 021247 139 ATLSIPRPEGL--KPTDKSSSKKFVLSVAWSP-DGRRIACGSMDG---TISVFDVTRA----------------KFLHHL 196 (315)
Q Consensus 139 ~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~-~~~~l~~~s~dg---~i~i~d~~~~----------------~~~~~~ 196 (315)
++..... .......+ .....++|+| +++.+++-.... .|.+...... ..+..+
T Consensus 180 ----~p~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~ 254 (354)
T 3a9g_A 180 ----PPADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDT 254 (354)
T ss_dssp ----CCTTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred ----CCCCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeec
Confidence 0000000 00000111 1245899999 566555433222 2433321110 111122
Q ss_pred cCCccceEEEEEcC------CCCcEEEEEeCCCeEEEEeCCCC-eeE--EEe-ecccccEEEEEEcCCCCeEEEEe
Q 021247 197 EGHFMPVRSLVYSP------VDPRVLFSASDDTHVHMYDAEGK-SLV--TAM-SGHASWVLSVDASPDGAAITTGS 262 (315)
Q Consensus 197 ~~~~~~v~~~~~~~------~~~~~l~s~~~d~~i~~wd~~~~-~~~--~~~-~~~~~~i~~~~~~~~~~~l~s~~ 262 (315)
.........+.|.. .++.++++.-..+.|...+++.. ... ..+ .+....+..+++.|+|.+.++..
T Consensus 255 ~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 255 GSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp TTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 11123456777731 35567777667788888887643 222 122 22245688999999987666543
No 331
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.05 E-value=0.5 Score=39.00 Aligned_cols=230 Identities=15% Similarity=0.117 Sum_probs=119.9
Q ss_pred ceEEEEeCCCCCEEEEeeCCCeEEEEECCCCcee--EEe----eCCcccEEEEEECCC---CCeEEEE--ecCCCeEEEE
Q 021247 62 GVVSVAAHPSGIIAASASLDSFVRVFDVDTNASI--ATL----EASPSEVWQMQFDPK---GTTLAVA--GGGSASVKLW 130 (315)
Q Consensus 62 ~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~--~~~----~~~~~~v~~~~~~~~---~~~~~~~--~~~d~~i~~~ 130 (315)
....+++.|+|.++++--..|.|++++..++... ..+ .........++++|+ +..++++ ...+..|.-|
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~ 112 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM 112 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence 4678999999998887655899999986655432 111 112345789999995 4445443 2233445545
Q ss_pred ecCCcc-----e--eee-e-cCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEec-------------CCCcEEEEEcc
Q 021247 131 DTATWN-----L--IAT-L-SIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS-------------MDGTISVFDVT 188 (315)
Q Consensus 131 d~~~~~-----~--~~~-~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s-------------~dg~i~i~d~~ 188 (315)
.....+ . ... + .++. .....-..|.|.|+|.+.++.+ ..|.|.-++..
T Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~p~----------~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d 182 (347)
T 3das_A 113 LYDEKKPSGEQLGAPDTVFRGIPK----------GVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD 182 (347)
T ss_dssp EBCTTSCTTCCBCCCEEEEEEECC----------CSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT
T ss_pred EeCCCCcccccCCCcEEEEEcCCC----------CCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC
Confidence 443311 0 000 0 0110 1122345799999998766643 23556555554
Q ss_pred cc--------eeeeeecCCccceEEEEEcCCCCcEEEEE-eCCC--eEEEEeCC--------CC--------eeEEEeec
Q 021247 189 RA--------KFLHHLEGHFMPVRSLVYSPVDPRVLFSA-SDDT--HVHMYDAE--------GK--------SLVTAMSG 241 (315)
Q Consensus 189 ~~--------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-~~d~--~i~~wd~~--------~~--------~~~~~~~~ 241 (315)
.. ....--.+|. ....++|+| ++.++++- +.|+ .|.+...- .+ ..+..+..
T Consensus 183 G~ip~~nPf~~~~i~a~G~R-Np~Gla~dp-~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~ 260 (347)
T 3das_A 183 GEPAPGNPFPGSPVYSYGHR-NVQGLAWDD-KQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWST 260 (347)
T ss_dssp SSBCTTCSSTTCCEEEBCCS-BCCEEEECT-TCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECT
T ss_pred CCccCCCCCCCCeEEeeCCC-CcceEEECC-CCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCC
Confidence 22 0001112343 345788998 45555443 2232 23222110 00 01112222
Q ss_pred ccccEEEEEEcCCCCeEEEEeCCCcEEEEecCcccee----hcccccccceEEEEEeeCCCEEEEEe
Q 021247 242 HASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAM----QSMTNHTDQVWGVSFRPLGGRVVSVS 304 (315)
Q Consensus 242 ~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~----~~~~~~~~~v~~~~~s~~~~~l~s~~ 304 (315)
+......++|- ++.++...-..+.|....+...... ..+.+....+..|+..|||..+++..
T Consensus 261 ~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 261 DEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp TTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred CCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 22345667776 4555555555566666666543221 11233346789999999998766644
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.05 E-value=0.081 Score=43.86 Aligned_cols=49 Identities=10% Similarity=0.013 Sum_probs=25.2
Q ss_pred CcEEEEEcccceeeee--ecCCccceEEEEEcCCCCcEEEEEeC------CCeEEEEeC
Q 021247 180 GTISVFDVTRAKFLHH--LEGHFMPVRSLVYSPVDPRVLFSASD------DTHVHMYDA 230 (315)
Q Consensus 180 g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~------d~~i~~wd~ 230 (315)
..+.+||+.+.+.... +......-.++... ++++++.|+. ...+..||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEe
Confidence 4789999987765432 21111110122222 4566666653 234677776
No 333
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.61 E-value=1.1 Score=41.08 Aligned_cols=192 Identities=9% Similarity=0.066 Sum_probs=92.9
Q ss_pred EEEEeeCC----CcEEEEcCCCCcceeec--------cccccceEEEEeCCCCCEEEEeeCCC------eEEEEECCCCc
Q 021247 32 LLLTGSLD----ETVKLWRPDDMQLERTN--------TGHCLGVVSVAAHPSGIIAASASLDS------FVRVFDVDTNA 93 (315)
Q Consensus 32 ~l~sgs~d----~~v~~w~~~~~~~~~~~--------~~h~~~v~~~~~~~~g~~l~s~~~d~------~i~~w~~~~~~ 93 (315)
+++.||.+ ..+.+||+.+.+-.... +.....-..+.+..++.+++.||.++ .+.++|..+..
T Consensus 400 iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~ 479 (695)
T 2zwa_A 400 VFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTRE 479 (695)
T ss_dssp EEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTE
T ss_pred EEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCc
Confidence 56666643 35677776654322211 11111112223322677777777543 47788887754
Q ss_pred eeEEeeCCccc--EEEEEECCCCCeEEEEecCCC--eEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCC
Q 021247 94 SIATLEASPSE--VWQMQFDPKGTTLAVAGGGSA--SVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169 (315)
Q Consensus 94 ~~~~~~~~~~~--v~~~~~~~~~~~~~~~~~~d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 169 (315)
-... ...+.+ -.++..-.++. +++.|+.++ .+.+||..+.+....-.. +..+..... ...+.+..+
T Consensus 480 W~~~-~~~p~~R~~h~~~~~~~~~-iyv~GG~~~~~~v~~yd~~t~~W~~~~~~----g~~p~~r~~----~~a~v~~~~ 549 (695)
T 2zwa_A 480 WSMI-KSLSHTRFRHSACSLPDGN-VLILGGVTEGPAMLLYNVTEEIFKDVTPK----DEFFQNSLV----SAGLEFDPV 549 (695)
T ss_dssp EEEC-CCCSBCCBSCEEEECTTSC-EEEECCBCSSCSEEEEETTTTEEEECCCS----SGGGGSCCB----SCEEEEETT
T ss_pred EEEC-CCCCCCcccceEEEEcCCE-EEEECCCCCCCCEEEEECCCCceEEccCC----CCCCCcccc----eeEEEEeCC
Confidence 3221 111111 11222222444 555565443 689999887654322110 001111111 223555555
Q ss_pred -CCEEEEecC--C-----CcEEEEEccccee-----eeeecC----CccceEEEEEcCCCCcEEEEEeC--------CCe
Q 021247 170 -GRRIACGSM--D-----GTISVFDVTRAKF-----LHHLEG----HFMPVRSLVYSPVDPRVLFSASD--------DTH 224 (315)
Q Consensus 170 -~~~l~~~s~--d-----g~i~i~d~~~~~~-----~~~~~~----~~~~v~~~~~~~~~~~~l~s~~~--------d~~ 224 (315)
++.++.|+. + ..+..||+.+.+. ...+.. .......+.+. ++.+++.|+. ...
T Consensus 550 ~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 627 (695)
T 2zwa_A 550 SKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYIT--PRKLLIVGGTSPSGLFDRTNS 627 (695)
T ss_dssp TTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEE--TTEEEEECCBCSSCCCCTTTS
T ss_pred CCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeC--CCEEEEECCccCCCCCCCCCe
Confidence 666677765 2 3589999987762 222211 11111222222 2667777774 245
Q ss_pred EEEEeCCCCee
Q 021247 225 VHMYDAEGKSL 235 (315)
Q Consensus 225 i~~wd~~~~~~ 235 (315)
+.+||..+.+-
T Consensus 628 v~~yd~~t~~W 638 (695)
T 2zwa_A 628 IISLDPLSETL 638 (695)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEECCCCeE
Confidence 88999887643
No 334
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.53 E-value=1.4 Score=40.23 Aligned_cols=195 Identities=12% Similarity=0.148 Sum_probs=98.9
Q ss_pred CCCCEEEEeeCC----CeEEEEECCCCceeEEe-e------CCcccEEEEEECCCCCeEEEEecCC------CeEEEEec
Q 021247 70 PSGIIAASASLD----SFVRVFDVDTNASIATL-E------ASPSEVWQMQFDPKGTTLAVAGGGS------ASVKLWDT 132 (315)
Q Consensus 70 ~~g~~l~s~~~d----~~i~~w~~~~~~~~~~~-~------~~~~~v~~~~~~~~~~~~~~~~~~d------~~i~~~d~ 132 (315)
.++.+++.||.+ ..+.++|..++.-...- . ..+..-.++...+.+..+++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777753 45888888876543322 1 0111111222222133455666533 35788888
Q ss_pred CCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCC--cEEEEEcccceeeeeec-----CCccceEE
Q 021247 133 ATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG--TISVFDVTRAKFLHHLE-----GHFMPVRS 205 (315)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg--~i~i~d~~~~~~~~~~~-----~~~~~v~~ 205 (315)
.+.+....-..+. .... .+++.-.+++.++.|+.++ .+.+||+.+.+....-. .......+
T Consensus 476 ~t~~W~~~~~~p~-------~R~~-----h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a 543 (695)
T 2zwa_A 476 KTREWSMIKSLSH-------TRFR-----HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAG 543 (695)
T ss_dssp TTTEEEECCCCSB-------CCBS-----CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCE
T ss_pred CCCcEEECCCCCC-------Cccc-----ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeE
Confidence 7754433211111 1111 1333323677778877654 69999998876543221 11111223
Q ss_pred EEEcCCCCcEEEEEeC--C-----CeEEEEeCCCCee-----EEEeecc--cc-cEEEEEEcCCCCeEEEEeC-------
Q 021247 206 LVYSPVDPRVLFSASD--D-----THVHMYDAEGKSL-----VTAMSGH--AS-WVLSVDASPDGAAITTGSS------- 263 (315)
Q Consensus 206 ~~~~~~~~~~l~s~~~--d-----~~i~~wd~~~~~~-----~~~~~~~--~~-~i~~~~~~~~~~~l~s~~~------- 263 (315)
+.+....+.+++.|+. + ..+.+||+.+.+- ...+... .. .-.++....++++++.||.
T Consensus 544 ~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~ 623 (695)
T 2zwa_A 544 LEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFD 623 (695)
T ss_dssp EEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCC
T ss_pred EEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCC
Confidence 4444433667777765 2 4588999876651 1111111 00 0012222333677777774
Q ss_pred -CCcEEEEecCccc
Q 021247 264 -DRTVKLWDLNMRA 276 (315)
Q Consensus 264 -d~~i~iwd~~~~~ 276 (315)
...|.+||..+..
T Consensus 624 ~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 624 RTNSIISLDPLSET 637 (695)
T ss_dssp TTTSEEEEETTTTE
T ss_pred CCCeEEEEECCCCe
Confidence 3458899987643
No 335
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.30 E-value=0.7 Score=35.34 Aligned_cols=139 Identities=11% Similarity=-0.003 Sum_probs=75.9
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEEccccee------eeeec--CCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCC
Q 021247 161 VLSVAWSPDGRRIACGSMDGTISVFDVTRAKF------LHHLE--GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG 232 (315)
Q Consensus 161 i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~------~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 232 (315)
+..++|+|+|.+.++ .+|.++-.+..+... -..+- +-+. ..++.|.| ++.+.++ .||.|+-++..+
T Consensus 43 ~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~-~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 43 FKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDP-NGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECT-TSCEEEE--ETTEEEEESCCC
T ss_pred ceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECC-CCCEEEe--CCCEEEEeCCCc
Confidence 668999998886666 677777777644111 11110 1111 46778887 5656655 559998887532
Q ss_pred C--ee-----EEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccce-----ehccc--ccccceEEEEEeeCCC
Q 021247 233 K--SL-----VTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA-----MQSMT--NHTDQVWGVSFRPLGG 298 (315)
Q Consensus 233 ~--~~-----~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-----~~~~~--~~~~~v~~~~~s~~~~ 298 (315)
. .. ...-...=..+..|.+.|+|.+.+.. |+.++-..-..... ..+.- .....-.-+.|.|+|.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 1 10 00011112457899999999876665 77754332221110 01111 1223445577999886
Q ss_pred EEEEEeCCCcE
Q 021247 299 RVVSVSDDKSI 309 (315)
Q Consensus 299 ~l~s~~~d~~i 309 (315)
..+.- ++.+
T Consensus 195 l~~v~--~g~~ 203 (236)
T 1tl2_A 195 LFGVQ--GGKF 203 (236)
T ss_dssp EEEEE--TTEE
T ss_pred EEEEe--CCeE
Confidence 55444 6643
No 336
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.24 E-value=1.1 Score=37.14 Aligned_cols=238 Identities=16% Similarity=0.192 Sum_probs=118.0
Q ss_pred cceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceee---c----cccccceEEEEeCCC----CCEEEEeeC---
Q 021247 15 ESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERT---N----TGHCLGVVSVAAHPS----GIIAASASL--- 80 (315)
Q Consensus 15 ~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~---~----~~h~~~v~~~~~~~~----g~~l~s~~~--- 80 (315)
...++++|.|++.. ++.+...|.|++++.+. +.... . .....+...++++|+ +.+.++-..
T Consensus 18 ~~P~~i~~~pdG~~----l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~ 92 (353)
T 2g8s_A 18 DHPWALAFLPDNHG----MLITLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGD 92 (353)
T ss_dssp SSEEEEEECSTTCC----EEEEETTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECS
T ss_pred CCcEEEEEcCCCCE----EEEEeCCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCC
Confidence 45689999987641 55566789999997543 21111 1 112346789999995 555555333
Q ss_pred ----CCeEEEEECCCCc----eeEE-eeCCc------ccEEEEEECCCCCeEEEEecCC-------------CeEEEEec
Q 021247 81 ----DSFVRVFDVDTNA----SIAT-LEASP------SEVWQMQFDPKGTTLAVAGGGS-------------ASVKLWDT 132 (315)
Q Consensus 81 ----d~~i~~w~~~~~~----~~~~-~~~~~------~~v~~~~~~~~~~~~~~~~~~d-------------~~i~~~d~ 132 (315)
...|..+++.... .... +...+ .....+.|.|+|. ++++.++. +.|.-+|.
T Consensus 93 ~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~ 171 (353)
T 2g8s_A 93 DGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGY-LFIALGENNQRPTAQDLDKLQGKLVRLTD 171 (353)
T ss_dssp SSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSE-EEEEECCTTCGGGGGCTTSCTTEEEEEET
T ss_pred CCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCc-EEEEECCCCCCCccCCCCCCCeEEEEECC
Confidence 2346666665431 1111 11111 1235789999985 44443332 34444443
Q ss_pred CCcceeeeecCCCCCCC------CCCccCCCCcceEEEEECC-CCCEEEEec-CCCcEEEEEccccee------------
Q 021247 133 ATWNLIATLSIPRPEGL------KPTDKSSSKKFVLSVAWSP-DGRRIACGS-MDGTISVFDVTRAKF------------ 192 (315)
Q Consensus 133 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~~~~~~~-~~~~l~~~s-~dg~i~i~d~~~~~~------------ 192 (315)
... ++....+ ..............++|+| +|+++++-. .++.=.+.-+..+..
T Consensus 172 dG~-------~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~ 244 (353)
T 2g8s_A 172 QGE-------IPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINY 244 (353)
T ss_dssp TSC-------CCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCT
T ss_pred CCC-------CCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCC
Confidence 321 0000000 0000000112256899999 555444322 221111211111110
Q ss_pred -------------------eeeecCCccceEEEEEcC------CCCcEEEEEeCCCeEEEEeCCCCeeEEE--e-ecccc
Q 021247 193 -------------------LHHLEGHFMPVRSLVYSP------VDPRVLFSASDDTHVHMYDAEGKSLVTA--M-SGHAS 244 (315)
Q Consensus 193 -------------------~~~~~~~~~~v~~~~~~~------~~~~~l~s~~~d~~i~~wd~~~~~~~~~--~-~~~~~ 244 (315)
+..+. +...+..+.|.+ .++.++++.-..+.|...+++.+..... + .....
T Consensus 245 ~~~~~~~~~~~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 323 (353)
T 2g8s_A 245 SGFKIPEAKGEIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQ 323 (353)
T ss_dssp TSSCCTTCCBSSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCC
T ss_pred CCCccCcccCCCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCC
Confidence 11111 122456677753 2356777766778888877765543322 1 12234
Q ss_pred cEEEEEEcCCCCeEEEEe-CCCc
Q 021247 245 WVLSVDASPDGAAITTGS-SDRT 266 (315)
Q Consensus 245 ~i~~~~~~~~~~~l~s~~-~d~~ 266 (315)
.+..+++.|+|.+.++.. .+|.
T Consensus 324 rp~~v~~~pdG~lyv~td~~~g~ 346 (353)
T 2g8s_A 324 RIRDVRTGPDGYLYVLTDESSGE 346 (353)
T ss_dssp CEEEEEECTTSCEEEEECSTTEE
T ss_pred ceeEEEECCCCcEEEEEeCCCCE
Confidence 688999999998666433 3443
No 337
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.21 E-value=0.75 Score=35.18 Aligned_cols=181 Identities=9% Similarity=0.006 Sum_probs=89.4
Q ss_pred CCCCEEEEeeCCCeEEEEECCCCc------eeEEeeC-CcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeec
Q 021247 70 PSGIIAASASLDSFVRVFDVDTNA------SIATLEA-SPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS 142 (315)
Q Consensus 70 ~~g~~l~s~~~d~~i~~w~~~~~~------~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~ 142 (315)
|.+.+|.....| +++.=...... ....+.. .-..+..++|+|++...++ .++.+.-.+..+.....-+.
T Consensus 2 ~~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV---~~G~Ly~~~~~t~~~~~W~~ 77 (236)
T 1tl2_A 2 GGESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV---LNDKIYKGTPPTHDNDNWMG 77 (236)
T ss_dssp CCCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE---ETTEEEEESCCCSTTCCHHH
T ss_pred CcceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE---eCCeEEEECCCCCCcccccc
Confidence 345677777777 66654444333 1222222 1235669999998774443 55665555543211000000
Q ss_pred CCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEccccee---e---eee-cCCccceEEEEEcCCCCcE
Q 021247 143 IPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKF---L---HHL-EGHFMPVRSLVYSPVDPRV 215 (315)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~---~---~~~-~~~~~~v~~~~~~~~~~~~ 215 (315)
... ........ ....+.|.|+|.+.++ .||.|+-++..+... + ..+ ..-=..+..+.|.| ++.+
T Consensus 78 s~t-----~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~L 148 (236)
T 1tl2_A 78 RAK-----KIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYL 148 (236)
T ss_dssp HCE-----EEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCE
T ss_pred ccc-----Eecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECC-CceE
Confidence 000 00000001 1368999999987777 569998887632111 0 111 11113568888998 4544
Q ss_pred EEEEeCCCeEEEEeCCCCe------eEEEee-cccccEEEEEEcCCCCeEEEEeCCCcE
Q 021247 216 LFSASDDTHVHMYDAEGKS------LVTAMS-GHASWVLSVDASPDGAAITTGSSDRTV 267 (315)
Q Consensus 216 l~s~~~d~~i~~wd~~~~~------~~~~~~-~~~~~i~~~~~~~~~~~l~s~~~d~~i 267 (315)
.+. . |+.++-...-... ....+. ..-....-+.|.|++.+.++. ++.+
T Consensus 149 yav-~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 149 YAV-H-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKF 203 (236)
T ss_dssp EEE-E-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred EEE-e-CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCeE
Confidence 444 4 7776443322110 011111 222234456688888766655 6643
No 338
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.77 E-value=2.5 Score=38.94 Aligned_cols=265 Identities=11% Similarity=0.143 Sum_probs=140.7
Q ss_pred cceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCce
Q 021247 15 ESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNAS 94 (315)
Q Consensus 15 ~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~ 94 (315)
..|.++.-.+. ..|..|..+| +..||..+.+...........|.++.. .+|. +..++.+ .+..++..+++.
T Consensus 63 ~~i~~i~~d~~-----g~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~~~~ 133 (758)
T 3ott_A 63 TRIYCGVIIDN-----TYLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGDT-LWLGALN-GLYTYQLQSRKL 133 (758)
T ss_dssp SCEEEEEEETT-----TEEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETTE-EEEEETT-EEEEEETTTCCE
T ss_pred ceEEEEEEcCC-----CcEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCCc-EEEEcCC-cceeEeCCCCeE
Confidence 45777654322 3577777655 678888765443211112234666654 3554 4445555 588888876543
Q ss_pred eEEee-----CCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCC
Q 021247 95 IATLE-----ASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD 169 (315)
Q Consensus 95 ~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 169 (315)
..+. .....|.++....++...+ +.. +-+..+|..+.+.. .+..+... ......|.++...++
T Consensus 134 -~~~~~~~~~l~~~~i~~i~~d~~g~lWi--gt~-~Gl~~~~~~~~~~~-~~~~~~~~-------~~~~~~i~~i~~d~~ 201 (758)
T 3ott_A 134 -TSFDTRRNGLPNNTIYSIIRTKDNQIYV--GTY-NGLCRYIPSNGKFE-GIPLPVHS-------SQSNLFVNSLLEDTT 201 (758)
T ss_dssp -EEECHHHHCCSCSCEEEEEECTTCCEEE--EET-TEEEEEETTTTEEE-EECCCCCT-------TCSSCCEEEEEEETT
T ss_pred -EEeccCCCCcCCCeEEEEEEcCCCCEEE--EeC-CCHhhCccCCCceE-EecCCCcc-------ccccceeEEEEEECC
Confidence 3331 1234678888777776543 233 35777887654432 22211110 111234788888777
Q ss_pred CCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeec-------c
Q 021247 170 GRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSG-------H 242 (315)
Q Consensus 170 ~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~-------~ 242 (315)
+..|..|+. +.+..+|..+++...........|.++...+ ++.+ ..|+.+ -+.+++.++......... .
T Consensus 202 ~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~l-WigT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~ 277 (758)
T 3ott_A 202 RQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDG-NGDL-LAGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLT 277 (758)
T ss_dssp TTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECT-TCCE-EEEETT-EEEEECCTTSCCEEECCCTTCTTSCS
T ss_pred CCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcC-CCCE-EEEeCC-ceeEEecCCCcEEEEEcCCCCcCcCC
Confidence 776655654 4688899876654322111234577777654 3444 444444 588888876544322110 1
Q ss_pred cccEEEEEEcCCCCeEEEEeCCCcEEEEecCcc-ceeh--ccc--ccccceEEEEEeeCCCEEEEEeCCC
Q 021247 243 ASWVLSVDASPDGAAITTGSSDRTVKLWDLNMR-AAMQ--SMT--NHTDQVWGVSFRPLGGRVVSVSDDK 307 (315)
Q Consensus 243 ~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~--~~~--~~~~~v~~~~~s~~~~~l~s~~~d~ 307 (315)
...|.++..+.+|. |..|+..| +.+...... +... ... .....|.++.-..+|...+.. .+|
T Consensus 278 ~~~i~~i~~D~~g~-lWiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt-~~G 344 (758)
T 3ott_A 278 NNIIWNIFADQEHN-IWLGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGG-ANG 344 (758)
T ss_dssp CSCEEEEEECTTCC-EEEEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEE-TTE
T ss_pred cCeEEEEEEcCCCC-EEEEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEEee-CCc
Confidence 24588888888776 44555566 554433211 1110 000 112457777777777655543 444
No 339
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.40 E-value=2.8 Score=34.42 Aligned_cols=113 Identities=7% Similarity=0.024 Sum_probs=70.8
Q ss_pred cEEEEeeCCCcEEEEcCCCCcceeecccc-ccceEEEEeC--C-CCCEEEEe-eCCCeEEEEECCCCceeEEeeCC----
Q 021247 31 ALLLTGSLDETVKLWRPDDMQLERTNTGH-CLGVVSVAAH--P-SGIIAASA-SLDSFVRVFDVDTNASIATLEAS---- 101 (315)
Q Consensus 31 ~~l~sgs~d~~v~~w~~~~~~~~~~~~~h-~~~v~~~~~~--~-~g~~l~s~-~~d~~i~~w~~~~~~~~~~~~~~---- 101 (315)
.+++.++.||.|.-+|.++++....+... ..++....-. + ++..++.. ..||.+..++..++.....+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47899999999999999888887765443 1233322111 1 23344333 58999999998887544333211
Q ss_pred cccEEEEE----E-CC---CCCeEEEEecCCCeEEEEecCCcceeeeecCC
Q 021247 102 PSEVWQMQ----F-DP---KGTTLAVAGGGSASVKLWDTATWNLIATLSIP 144 (315)
Q Consensus 102 ~~~v~~~~----~-~~---~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~ 144 (315)
..++.. . . .+ .....+++|+.++.+...|+++++.+..+...
T Consensus 91 ~SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 91 TSPLHL-KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp TCSEEE-ECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred cccccc-CCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 112211 0 0 00 01235578889999999999999999988654
No 340
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=92.80 E-value=3 Score=33.17 Aligned_cols=219 Identities=13% Similarity=0.030 Sum_probs=105.0
Q ss_pred ceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeee
Q 021247 62 GVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL 141 (315)
Q Consensus 62 ~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~ 141 (315)
.|..++.......++ . |+.++.|-.+....+-.-......|..++.-. ...++. . |+.|..|-....-.+.
T Consensus 25 ~i~~ia~G~~h~~~l--~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~--~hs~~l-~-~G~v~~wG~n~~Gqlg-- 95 (282)
T 3qhy_B 25 GVDAIAGGYFHGLAL--K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGN--YHSLAL-K-DGEVIAWGGNEDGQTT-- 95 (282)
T ss_dssp SCCEEEECSSEEEEE--E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECS--SEEEEE-E-TTEEEEEECCTTSTTC--
T ss_pred CCcEEEeCCCeEEEE--E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCC--CEEEEE-E-CCEEEEeeCCCCCCCC--
Confidence 566776654433333 4 89999998664321111111123455555432 223333 3 7888888764321110
Q ss_pred cCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeC
Q 021247 142 SIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASD 221 (315)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 221 (315)
.|. .. ...|..++.... ..++-. +|.|+.|=....-.+..-......|..++-.. ...+.-.
T Consensus 96 -~P~-------~~---~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~---~~~~~l~- 157 (282)
T 3qhy_B 96 -VPA-------EA---RSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGV---YTALAVK- 157 (282)
T ss_dssp -CCG-------GG---SSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECS---SEEEEEE-
T ss_pred -CCc-------cc---CCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEccc---CEEEEEE-
Confidence 110 00 123666665543 333334 88999996532111111111223566665442 2222233
Q ss_pred CCeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeCCCEEE
Q 021247 222 DTHVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPLGGRVV 301 (315)
Q Consensus 222 d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 301 (315)
|+.++.|-....-.+.....-...|..++..... .++. .||.|..|-.+....+..-......|..++-... +.+
T Consensus 158 ~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~--h~~ 232 (282)
T 3qhy_B 158 NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEW--YSL 232 (282)
T ss_dssp TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSS--CEE
T ss_pred CCEEEEecCCCCCCCCCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCC--EEE
Confidence 7899999754321111111123457777765543 3343 5999999976543222111111234555554433 333
Q ss_pred EEeCCCcEEEee
Q 021247 302 SVSDDKSISLYE 313 (315)
Q Consensus 302 s~~~d~~i~i~~ 313 (315)
... ||+|..|-
T Consensus 233 al~-~g~v~~wG 243 (282)
T 3qhy_B 233 ALK-NGKVIAWG 243 (282)
T ss_dssp EEE-TTEEEEES
T ss_pred EEE-CCEEEEec
Confidence 333 88887774
No 341
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.62 E-value=2.3 Score=37.44 Aligned_cols=87 Identities=10% Similarity=0.091 Sum_probs=53.9
Q ss_pred ccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcE
Q 021247 103 SEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTI 182 (315)
Q Consensus 103 ~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i 182 (315)
...-.+..+|+|++++++|-.+.++.++|.+.......-.+..+......+ ...-......+|.++|+-..+-..|..|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae-~e~GlGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGE-PELGLGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEEC-CBCCSCEEEEEECSSSEEEEEETTTTEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEee-ccCCCcccEEEECCCCceEeeeeecceE
Confidence 334567889999999999999999999998752211000000000000000 0001125678999999666677799999
Q ss_pred EEEEcccc
Q 021247 183 SVFDVTRA 190 (315)
Q Consensus 183 ~i~d~~~~ 190 (315)
..|++...
T Consensus 402 vkWni~~a 409 (638)
T 3sbq_A 402 VKWNMEEA 409 (638)
T ss_dssp EEEEHHHH
T ss_pred EEEeccHH
Confidence 99998653
No 342
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=92.35 E-value=3.9 Score=33.42 Aligned_cols=225 Identities=11% Similarity=0.100 Sum_probs=120.3
Q ss_pred EEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCC-ceeEEeeCCc----ccEE
Q 021247 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN-ASIATLEASP----SEVW 106 (315)
Q Consensus 32 ~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~-~~~~~~~~~~----~~v~ 106 (315)
++|--+ ..+++++|.++.+..+...-. .+|..=.|-... .|+-.. +..|+-|++... .+...++.|. ..|.
T Consensus 80 ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QII 155 (365)
T 2xzh_A 80 VIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQII 155 (365)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEE
T ss_pred EEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEE
Confidence 455444 678999999887665554332 344444443333 233222 457999999754 3455555443 4677
Q ss_pred EEEECCCCCeEEEEec------CCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEE--CCCCCEEEE-e-
Q 021247 107 QMQFDPKGTTLAVAGG------GSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAW--SPDGRRIAC-G- 176 (315)
Q Consensus 107 ~~~~~~~~~~~~~~~~------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~-~- 176 (315)
..+.+++.+-+++.|- -.|.+.+|..+..... .+ .+|......+.+ ++....|++ +
T Consensus 156 nY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ-~i-------------eGhaa~F~~~~~~g~~~~~~lf~fa~ 221 (365)
T 2xzh_A 156 NYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PI-------------EGHAASFAQFKMEGNAEESTLFCFAV 221 (365)
T ss_dssp EEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEE-EE-------------CCSEEEEEEECCTTCSSCEEEEEEEE
T ss_pred EEEECCCCCEEEEEeEeccCCccceeEEEEeecccccc-ee-------------eeeeeeeEEEecCCCCCCceEEEEEE
Confidence 7788888887776653 1366777776542211 11 111111111111 011112222 1
Q ss_pred --cCCCcEEEEEcccc---ee------eeeec---CCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecc
Q 021247 177 --SMDGTISVFDVTRA---KF------LHHLE---GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGH 242 (315)
Q Consensus 177 --s~dg~i~i~d~~~~---~~------~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 242 (315)
...+.+++.++... .. ...+. ...+-..++..++ .-.++..-+.-|.|++||++++.++..-+--
T Consensus 222 r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~-kygviyviTK~G~ihlyDleTgt~i~~nrIS 300 (365)
T 2xzh_A 222 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMNRIS 300 (365)
T ss_dssp EETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEET-TTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred ecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecc-cCCEEEEEeCCcEEEEEEcccCcEEEEeccC
Confidence 12357888887432 10 11011 1122334566665 3347778889999999999999887765544
Q ss_pred cccEEEEEEcCCCCeEEEEeCCCcEEEEecCcc
Q 021247 243 ASWVLSVDASPDGAAITTGSSDRTVKLWDLNMR 275 (315)
Q Consensus 243 ~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 275 (315)
...|...+.+....=++.-...|.|.--.++..
T Consensus 301 ~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 301 GETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTCEEEEEEECTT
T ss_pred CCceEEecccCCCCcEEEEcCCCEEEEEEECcc
Confidence 455554444333222344446777666655543
No 343
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=92.35 E-value=4.9 Score=34.51 Aligned_cols=119 Identities=13% Similarity=0.226 Sum_probs=61.2
Q ss_pred EEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCC---CCE
Q 021247 96 ATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD---GRR 172 (315)
Q Consensus 96 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~ 172 (315)
..+.......+.++|.|+|.. +++-...+.|.+++..+++......++... ...........|+|+|+ +.+
T Consensus 20 ~~~a~~l~~P~~~a~~pdG~l-~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~-----~~~~g~~Gllgia~~Pdf~~~g~ 93 (454)
T 1cru_A 20 KVILSNLNKPHALLWGPDNQI-WLTERATGKILRVNPESGSVKTVFQVPEIV-----NDADGQNGLLGFAFHPDFKNNPY 93 (454)
T ss_dssp EEEECCCSSEEEEEECTTSCE-EEEETTTCEEEEECTTTCCEEEEEECTTCC-----CCTTSSCSEEEEEECTTTTTSCE
T ss_pred EEEECCCCCceEEEEcCCCcE-EEEEcCCCEEEEEECCCCcEeEEecCCccc-----cccCCCCceeEEEECCCcCcCCE
Confidence 334334456789999999984 444333346888876544332222221110 00011234779999995 555
Q ss_pred EEEec-C------------CCcEEEEEcccc-------eeee-eecC-CccceEEEEEcCCCCcEEEEEeC
Q 021247 173 IACGS-M------------DGTISVFDVTRA-------KFLH-HLEG-HFMPVRSLVYSPVDPRVLFSASD 221 (315)
Q Consensus 173 l~~~s-~------------dg~i~i~d~~~~-------~~~~-~~~~-~~~~v~~~~~~~~~~~~l~s~~~ 221 (315)
|..+. . ...|.-+++... +.+. .+.. .......+.|.| ++.++++.++
T Consensus 94 lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd 163 (454)
T 1cru_A 94 IYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGD 163 (454)
T ss_dssp EEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECC
T ss_pred EEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECC
Confidence 54433 2 235666665321 1111 1221 112357899998 5567666543
No 344
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.44 E-value=7.1 Score=34.48 Aligned_cols=68 Identities=10% Similarity=0.087 Sum_probs=47.6
Q ss_pred EEEEEEcCCCCeEEEE-eCCCcEEEEecCccce-------------ehcccccccceEEEEEeeCCCEEEEEeCCCcEEE
Q 021247 246 VLSVDASPDGAAITTG-SSDRTVKLWDLNMRAA-------------MQSMTNHTDQVWGVSFRPLGGRVVSVSDDKSISL 311 (315)
Q Consensus 246 i~~~~~~~~~~~l~s~-~~d~~i~iwd~~~~~~-------------~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~i 311 (315)
...+.++|+|++++.+ -.+.++.++|+..-.. ..+.+ -.-.....+|.++|....+.-.|..|--
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEE
Confidence 4468899999987555 4577899999874211 11111 1234668999999966667778999999
Q ss_pred eec
Q 021247 312 YEY 314 (315)
Q Consensus 312 ~~~ 314 (315)
|++
T Consensus 404 Wni 406 (638)
T 3sbq_A 404 WNM 406 (638)
T ss_dssp EEH
T ss_pred Eec
Confidence 986
No 345
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.97 E-value=5.8 Score=32.64 Aligned_cols=232 Identities=12% Similarity=0.143 Sum_probs=112.7
Q ss_pred cceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceee--c----cccccceEEEEeCCC----CCEEEEe--eCCC
Q 021247 15 ESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERT--N----TGHCLGVVSVAAHPS----GIIAASA--SLDS 82 (315)
Q Consensus 15 ~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~--~----~~h~~~v~~~~~~~~----g~~l~s~--~~d~ 82 (315)
+..++++|.|++. ++++--..|.|++++.++.+.... + .....+...++++|+ +.+.++- ..+.
T Consensus 32 ~~P~~ia~~pdG~----llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~ 107 (347)
T 3das_A 32 NSPWGLAPLPGGD----LLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDN 107 (347)
T ss_dssp SSEEEEEECTTSC----EEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSE
T ss_pred CCceEEEEcCCCc----EEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCC
Confidence 4678999998764 444443489999998655443211 1 123457899999995 5555542 2344
Q ss_pred eEEEEECCCC----------ceeE-EeeC-CcccEEEEEECCCCCeEEEEecCC-------------CeEEEEecCCcce
Q 021247 83 FVRVFDVDTN----------ASIA-TLEA-SPSEVWQMQFDPKGTTLAVAGGGS-------------ASVKLWDTATWNL 137 (315)
Q Consensus 83 ~i~~w~~~~~----------~~~~-~~~~-~~~~v~~~~~~~~~~~~~~~~~~d-------------~~i~~~d~~~~~~ 137 (315)
.|.-|.+..+ +.+. .+.. .......+.|.|+|..+ ++.++. +.|.-.+... +
T Consensus 108 ~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Ly-vt~Gd~~~~~~~qd~~~~~G~IlRi~~dG-~- 184 (347)
T 3das_A 108 RIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLY-AGTGESGDTGLSQDRKSLGGKILRMTPDG-E- 184 (347)
T ss_dssp EEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEE-EECBCTTCGGGTTCTTCSTTCEEEECTTS-S-
T ss_pred EEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEE-EEECCCCCCccccCCCCCCCEEEEEeCCC-C-
Confidence 5655665541 1111 1211 11123468899998644 443321 2222222211 0
Q ss_pred eeeecCCCCCCC--CCCccCCCCcceEEEEECCCCCEEEEe-cCCCcEEEEEccccee------------------eeee
Q 021247 138 IATLSIPRPEGL--KPTDKSSSKKFVLSVAWSPDGRRIACG-SMDGTISVFDVTRAKF------------------LHHL 196 (315)
Q Consensus 138 ~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~-s~dg~i~i~d~~~~~~------------------~~~~ 196 (315)
++....+ .......+. -...++|+|+|++.++- +.++.=.+--+..+.. +..+
T Consensus 185 -----ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~ 258 (347)
T 3das_A 185 -----PAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQW 258 (347)
T ss_dssp -----BCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEE
T ss_pred -----ccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEec
Confidence 0000000 000011221 24589999987765543 2333222222222211 1111
Q ss_pred cCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCee----EEEeecccccEEEEEEcCCCCeEEEE
Q 021247 197 EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSL----VTAMSGHASWVLSVDASPDGAAITTG 261 (315)
Q Consensus 197 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~s~ 261 (315)
..+......+.|. ++.+++..-..+.|....++.... ...+.+....+.+++..|+|.++++-
T Consensus 259 ~~~~~ap~G~~~~--~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~t 325 (347)
T 3das_A 259 STDEASPSGIAYA--EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVT 325 (347)
T ss_dssp CTTTCCEEEEEEE--TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEE
T ss_pred CCCCCCCcceEEE--cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEE
Confidence 1121244566665 355666665666666555543321 22233334668888888888765543
No 346
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=89.82 E-value=17 Score=36.20 Aligned_cols=187 Identities=11% Similarity=0.137 Sum_probs=94.4
Q ss_pred EEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEe-CCCCCEEEEeeCCCeEEEEECCCCc-eeEEeeCC----cccE
Q 021247 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAA-HPSGIIAASASLDSFVRVFDVDTNA-SIATLEAS----PSEV 105 (315)
Q Consensus 32 ~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~-~~~g~~l~s~~~d~~i~~w~~~~~~-~~~~~~~~----~~~v 105 (315)
+++-=+ ..+++++|.++.+..+...-.. +|..=.| +++.--++| +..|+-|++.... +...++.| ...|
T Consensus 79 iiALra-g~~lQiFnl~~k~klks~~~~e-~VvfWkWis~~~l~lVT---~~aVyHW~~~~~s~P~k~fdR~~~L~~~QI 153 (1630)
T 1xi4_A 79 VIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALVT---DNAVYHWSMEGESQPVKMFDRHSSLAGCQI 153 (1630)
T ss_pred eEEEec-CCeEEEeehHHhhhhcccccCC-CceEEEecCCCeeEEEc---CCeEEEeccCCCCccHHHHhcchhcccCee
Confidence 344433 6789999987665444433222 3433333 444333343 4579999997532 33333333 3467
Q ss_pred EEEEECCCCCeEEEEec------CCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEEC--CCCCEEEE-e
Q 021247 106 WQMQFDPKGTTLAVAGG------GSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS--PDGRRIAC-G 176 (315)
Q Consensus 106 ~~~~~~~~~~~~~~~~~------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~-~ 176 (315)
...+.+++.+.+++.|- -.|.+.+|........ .+ .+|......+... +....+++ +
T Consensus 154 inY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ-~i-------------egha~~F~~~~~~~~~~~~~l~~f~ 219 (1630)
T 1xi4_A 154 INYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PI-------------EGHAASFAQFKMEGNAEESTLFCFA 219 (1630)
T ss_pred EEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccch-hh-------------hHhHhhhheeccCCCCCCceEEEEE
Confidence 77777888887776653 2467777776542110 00 0110000011110 11111211 1
Q ss_pred ---cCCCcEEEEEcccc---ee--eee----ec---CCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEE
Q 021247 177 ---SMDGTISVFDVTRA---KF--LHH----LE---GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTA 238 (315)
Q Consensus 177 ---s~dg~i~i~d~~~~---~~--~~~----~~---~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~ 238 (315)
...+.+++.++... .. ... .. ....-..++..++. -.++..-+.-|.|++||+.+++.+..
T Consensus 220 ~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k-~g~iy~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 220 VRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK-HDVVFLITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred EecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccc-cCEEEEEecCceEEEEecccchhhhh
Confidence 11367888887432 10 000 00 01122234555553 34677788899999999999876643
No 347
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=88.94 E-value=10 Score=32.41 Aligned_cols=224 Identities=10% Similarity=0.089 Sum_probs=121.4
Q ss_pred EEEEeeCCCcEEEEcCCCCcceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCC-ceeEEeeCCc----ccEE
Q 021247 32 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN-ASIATLEASP----SEVW 106 (315)
Q Consensus 32 ~l~sgs~d~~v~~w~~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~-~~~~~~~~~~----~~v~ 106 (315)
++|-=+ ..+++++|.++.+..+...-...-+.-=.++++-.-|++ +..|+-|++... .+...++.|. ..|.
T Consensus 79 iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lVT---~taVyHWsi~~~s~P~kvFdR~~~L~~~QII 154 (494)
T 1bpo_A 79 VIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT---DNAVYHWSMEGESQPVKMFDRHSSLAGCQII 154 (494)
T ss_dssp CEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEEC---SSEEEEEESSSSCCCEEEEECCGGGTTCEEE
T ss_pred EEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEEc---CCeeEEecccCCCCchhheecchhcccceEE
Confidence 444444 678999999877665554333333333333444323332 457999999754 3455555443 4677
Q ss_pred EEEECCCCCeEEEEec------CCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECC--CCCEEEE-ec
Q 021247 107 QMQFDPKGTTLAVAGG------GSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSP--DGRRIAC-GS 177 (315)
Q Consensus 107 ~~~~~~~~~~~~~~~~------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~-~s 177 (315)
....+++.+-+++.|- -.|.+.+|..+..... .+ .+|......+...- ....|++ +.
T Consensus 155 nY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ-~i-------------eGhaa~F~~~~~~g~~~~~~lf~fa~ 220 (494)
T 1bpo_A 155 NYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PI-------------EGHAASFAQFKMEGNAEESTLFCFAV 220 (494)
T ss_dssp EEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEE-EE-------------CCSEEEEEEEECTTCSSEEEEEEEEE
T ss_pred EEEECCCCCeEEEEeecccCCcccceEEEeeccccccc-hh-------------eeeeeeeEEEecCCCCCCceEEEEEE
Confidence 7788888888776653 2366777776542211 01 11111111111111 1111222 21
Q ss_pred ---CCCcEEEEEcccc---e--e---eeee-c---CCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecc
Q 021247 178 ---MDGTISVFDVTRA---K--F---LHHL-E---GHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGH 242 (315)
Q Consensus 178 ---~dg~i~i~d~~~~---~--~---~~~~-~---~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 242 (315)
..+.+++.++... . . ...+ . ...+-..++..++. -.++..-+.-|.|++||+.++.++..-+--
T Consensus 221 r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~k-ygviyviTK~G~i~lyDleTgt~i~~nrIs 299 (494)
T 1bpo_A 221 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK-HDVVFLITKYGYIHLYDLETGTCIYMNRIS 299 (494)
T ss_dssp CSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETT-TTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred ecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEeccc-CCEEEEEecCceEEEEecccceeeeeeccc
Confidence 2368888888432 1 0 0111 0 11233456666663 347778889999999999999887765544
Q ss_pred cccEEEEEEcCCCCeEEEEeCCCcEEEEecCc
Q 021247 243 ASWVLSVDASPDGAAITTGSSDRTVKLWDLNM 274 (315)
Q Consensus 243 ~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 274 (315)
...|...+.+....=++.....|.|.--.++.
T Consensus 300 ~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 300 GETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp SSCEEEEEEETTTTEEEEEETTCEEEEEEECT
T ss_pred CCceEEecccCCCCcEEEEccCceEEEEEEcc
Confidence 45555444444333344445777766655554
No 348
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=87.94 E-value=8.8 Score=30.45 Aligned_cols=240 Identities=14% Similarity=0.028 Sum_probs=117.9
Q ss_pred cceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCC-cceeeccccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCCc
Q 021247 15 ESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDM-QLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA 93 (315)
Q Consensus 15 ~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~-~~~~~~~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~ 93 (315)
..|..|+-.... .++. . ||.|..|-.... ++.... .....|..++.......++ . ||.++.|-.+...
T Consensus 24 ~~i~~ia~G~~h-----~~~l-~-~G~v~~wG~n~~Gqlg~p~-~~~~~i~~ia~G~~hs~~l--~-~G~v~~wG~n~~G 92 (282)
T 3qhy_B 24 SGVDAIAGGYFH-----GLAL-K-GGKVLGWGANLNGQLTMPA-ATQSGVDAIAAGNYHSLAL--K-DGEVIAWGGNEDG 92 (282)
T ss_dssp SSCCEEEECSSE-----EEEE-E-TTEEEEEECCSSSTTSCCG-GGGSCCCEEEECSSEEEEE--E-TTEEEEEECCTTS
T ss_pred CCCcEEEeCCCe-----EEEE-E-CCEEEEEeCCCCCCCCCCc-cCCCCEEEEEeCCCEEEEE--E-CCEEEEeeCCCCC
Confidence 356666543321 2333 4 999999975432 222111 1223566777655444433 4 8999999866432
Q ss_pred eeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEE
Q 021247 94 SIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI 173 (315)
Q Consensus 94 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 173 (315)
.+-.-......|..++.-.. ..++. . ++.|..|-....-.+. .+. .....|..++..... .+
T Consensus 93 qlg~P~~~~~~v~~ia~G~~--hs~al-~-~G~v~~wG~n~~gqlg---~~~----------~~~~~i~~i~~G~~~-~~ 154 (282)
T 3qhy_B 93 QTTVPAEARSGVDAIAAGAW--ASYAL-K-DGKVIAWGDDSDGQTT---VPA----------EAQSGVTALDGGVYT-AL 154 (282)
T ss_dssp TTCCCGGGSSSEEEEEEETT--EEEEE-E-TTEEEEEECCTTSTTS---CCG----------GGGSSEEEEEECSSE-EE
T ss_pred CCCCCcccCCCeEEEECcCC--EEEEE-e-CCeEEEecCCCCCcCC---CCc----------cCCCCeEEEEcccCE-EE
Confidence 21111111235666655432 22222 3 8899999764321110 000 011225566554332 22
Q ss_pred EEecCCCcEEEEEcccceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEEEEEEcC
Q 021247 174 ACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVLSVDASP 253 (315)
Q Consensus 174 ~~~s~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~ 253 (315)
+ -. ||.++.|-......+..-..-...|..++-.. ...++. .|+.++.|-....-.+.........|..++...
T Consensus 155 ~-l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~--~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~ 228 (282)
T 3qhy_B 155 A-VK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGI--FHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGE 228 (282)
T ss_dssp E-EE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECS--SEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECS
T ss_pred E-EE-CCEEEEecCCCCCCCCCceecCCCeEEEEecC--CEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCC
Confidence 2 23 68888886532111111111123566666542 223333 589999997543211111111223466777655
Q ss_pred CCCeEEEEeCCCcEEEEecCccceehcccccccceEEEEEeeC
Q 021247 254 DGAAITTGSSDRTVKLWDLNMRAAMQSMTNHTDQVWGVSFRPL 296 (315)
Q Consensus 254 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~ 296 (315)
....+++ ||+|..|-.+...++.. ...|.+++-...
T Consensus 229 ~h~~al~---~g~v~~wG~n~~gq~~v----~~~v~~iaaG~~ 264 (282)
T 3qhy_B 229 WYSLALK---NGKVIAWGSSRTAPSSV----QSGVSSIEAGPN 264 (282)
T ss_dssp SCEEEEE---TTEEEEESTTCCCCGGG----SSCEEEEEECSS
T ss_pred CEEEEEE---CCEEEEecCCCCccccC----CCCcEEEEECcC
Confidence 4333333 99999998766544443 235666665554
No 349
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=87.49 E-value=11 Score=31.27 Aligned_cols=274 Identities=9% Similarity=0.009 Sum_probs=120.5
Q ss_pred CcEEEEeeCCCcEEEEcCCC-Ccceeec--cccccceEEEEeCC--CCCEEEEeeCCC----eEEEEECCCCceeEEeeC
Q 021247 30 PALLLTGSLDETVKLWRPDD-MQLERTN--TGHCLGVVSVAAHP--SGIIAASASLDS----FVRVFDVDTNASIATLEA 100 (315)
Q Consensus 30 ~~~l~sgs~d~~v~~w~~~~-~~~~~~~--~~h~~~v~~~~~~~--~g~~l~s~~~d~----~i~~w~~~~~~~~~~~~~ 100 (315)
+..|+.|...| +.+++.+. .+.-... ......|.+|.++| .+.+.+.+ ..+ .|... .+.++.-..+..
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~-~~g~~g~gl~~s-~D~G~tW~~~~~ 98 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAA-RTGHLGPTVFRS-DDGGGNWTEATR 98 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEE-EC--CCEEEEEE-SSTTSCCEECSB
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEe-cCCCCCccEEEe-CCCCCCceECCc
Confidence 34688888777 44454332 1111111 11234689999998 55555544 333 34332 223333222211
Q ss_pred --------------CcccEEEEEECCC--CCeEEEEecCCCeEEEEecCCcceeeeecCC-CCCCC--CC--CccCCCCc
Q 021247 101 --------------SPSEVWQMQFDPK--GTTLAVAGGGSASVKLWDTATWNLIATLSIP-RPEGL--KP--TDKSSSKK 159 (315)
Q Consensus 101 --------------~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~--~~--~~~~~~~~ 159 (315)
....|..++++|. ...+++ +...+.|...+-............ .+... .. ........
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~-g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~ 177 (394)
T 3b7f_A 99 PPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA-GTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGP 177 (394)
T ss_dssp CCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE-EEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCC
T ss_pred cccCCCcccccccccccceeEEEeCCCCCCCEEEE-EecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCC
Confidence 1124778888873 344443 334455544432211111110000 00000 00 00001123
Q ss_pred ceEEEEECCC-CCEEEEecCCCcEEEEEcccceeeeeecC----C---------ccceEEEEEcCCCCcEEEEEeCCCeE
Q 021247 160 FVLSVAWSPD-GRRIACGSMDGTISVFDVTRAKFLHHLEG----H---------FMPVRSLVYSPVDPRVLFSASDDTHV 225 (315)
Q Consensus 160 ~i~~~~~~~~-~~~l~~~s~dg~i~i~d~~~~~~~~~~~~----~---------~~~v~~~~~~~~~~~~l~s~~~d~~i 225 (315)
.+..+.++|. ...+..+..++.|...+- .++....+.. . ...+..+.+.|.++..+..+...+ |
T Consensus 178 ~i~~i~~d~~~~~~l~vg~~~ggl~~s~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l 255 (394)
T 3b7f_A 178 KMHSILVDPRDPKHLYIGMSSGGVFESTD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-I 255 (394)
T ss_dssp EEEEEEECTTCTTCEEEEEETBEEEEESS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-E
T ss_pred ceeEEEECCCCCCEEEEEECCCCEEEECC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-E
Confidence 4778999883 445555554454544432 2222222110 0 124788999986666777766554 5
Q ss_pred EEEeCCCCeeEEEeec-c-c---ccEEEEEEcCC-CCeEEEEeC-----------CCcEEEEecCc-cceehccc----c
Q 021247 226 HMYDAEGKSLVTAMSG-H-A---SWVLSVDASPD-GAAITTGSS-----------DRTVKLWDLNM-RAAMQSMT----N 283 (315)
Q Consensus 226 ~~wd~~~~~~~~~~~~-~-~---~~i~~~~~~~~-~~~l~s~~~-----------d~~i~iwd~~~-~~~~~~~~----~ 283 (315)
...+-...+- ..+.. - . ..+..+.++|. ...|..+.. ++...+|.... ++.+..+. .
T Consensus 256 ~~s~D~G~tW-~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~ 334 (394)
T 3b7f_A 256 YRMDRREGVW-KRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPT 334 (394)
T ss_dssp EEEETTTTEE-ECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCC
T ss_pred EEeCCCCCcc-eECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCC
Confidence 4444333222 11111 1 1 34567888763 334444432 33344554433 23333221 1
Q ss_pred ccc---c-eEEEEEeeCC-CEEEEEeCCCcEE
Q 021247 284 HTD---Q-VWGVSFRPLG-GRVVSVSDDKSIS 310 (315)
Q Consensus 284 ~~~---~-v~~~~~s~~~-~~l~s~~~d~~i~ 310 (315)
... . ...++++|.. ..|+.++.++.|.
T Consensus 335 ~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~ 366 (394)
T 3b7f_A 335 DQAWLTVKRQAMTADAHAPVGVYFGTTGGEIW 366 (394)
T ss_dssp SSCCCCCCTBSEEECCSSSCCEEEECTTSCEE
T ss_pred ccccceEEEEEEEECCCCCCEEEEEeCCCeEE
Confidence 000 0 1357787753 4466666566554
No 350
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=87.23 E-value=10 Score=30.45 Aligned_cols=176 Identities=7% Similarity=0.010 Sum_probs=92.1
Q ss_pred EeCCCCCEEEEeeC--------------CCeEEEEECCCCceeEEeeCCcccEEEEEECCCCCeEEEEe---cCCCeEEE
Q 021247 67 AAHPSGIIAASASL--------------DSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAG---GGSASVKL 129 (315)
Q Consensus 67 ~~~~~g~~l~s~~~--------------d~~i~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~~d~~i~~ 129 (315)
.++++|..|.=+.. +..|+..++...+... +.... ...++|.++.++.+. .....|..
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDPDP----CIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EECSC----EEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eecCC----ccEEEEeCCEEEEEeecCCCCceEEE
Confidence 44677776654432 2467888887665333 22222 225667788887765 34456666
Q ss_pred EecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEec-CCCcEEEEEcccceeeeeecCCccceEEEEE
Q 021247 130 WDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGS-MDGTISVFDVTRAKFLHHLEGHFMPVRSLVY 208 (315)
Q Consensus 130 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s-~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 208 (315)
.++...+.. .+.-. .+ .+++++++.|+-.+ ....|...++..+.......+ ... ..+
T Consensus 134 ~~~dGs~~~-~lt~~---------------~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~~~-~~~ 191 (302)
T 3s25_A 134 IRIDGEEKK-KIKNH---------------YL--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC---NCY-KPV 191 (302)
T ss_dssp EETTSCCCE-EEESS---------------CC--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS---CEE-EEE
T ss_pred EECCCCCeE-EEeCC---------------Cc--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC---Ccc-cee
Confidence 666543221 12100 01 23566777776444 356788888866543322222 222 235
Q ss_pred cCCCCcEEEEEeCC-CeEEEEeCCCCeeEEEeecccccEEEEEEcCCCCeEEEEe--CCCcEEEEecCc
Q 021247 209 SPVDPRVLFSASDD-THVHMYDAEGKSLVTAMSGHASWVLSVDASPDGAAITTGS--SDRTVKLWDLNM 274 (315)
Q Consensus 209 ~~~~~~~l~s~~~d-~~i~~wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~--~d~~i~iwd~~~ 274 (315)
.|.++.+..+-..+ ..|..-++.+.... .+.. ..+ ..++|++..|.-+. ....|..-+++-
T Consensus 192 ~P~g~~iy~t~~~~~~~I~~~~ldG~~~~-~Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 192 VLDDTNVYYMDVNRDNAIVHVNINNPNPV-VLTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEECSSSCCCE-ECSC--SCE--EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred eecCCEEEEEEcCCCcEEEEEECCCCCeE-EEeC--CCc--ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 57666555554333 46766677655432 2222 223 23677777765442 234565556653
No 351
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=86.64 E-value=14 Score=31.70 Aligned_cols=106 Identities=15% Similarity=0.179 Sum_probs=59.1
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCC---eeEEEee---------cccccEEEEEEcCC----CCeEEEEeC--
Q 021247 202 PVRSLVYSPVDPRVLFSASDDTHVHMYDAEGK---SLVTAMS---------GHASWVLSVDASPD----GAAITTGSS-- 263 (315)
Q Consensus 202 ~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~---~~~~~~~---------~~~~~i~~~~~~~~----~~~l~s~~~-- 263 (315)
..+.|+|.|++...++.+...|.|++++..+. ..+..+. ........|+++|+ +.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 55789999855323445567899999975432 1222211 11356789999996 444343322
Q ss_pred C----------CcEEEEecCcc----------ceehccc--ccccceEEEEEeeCCCEEEEEeCCC
Q 021247 264 D----------RTVKLWDLNMR----------AAMQSMT--NHTDQVWGVSFRPLGGRVVSVSDDK 307 (315)
Q Consensus 264 d----------~~i~iwd~~~~----------~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~d~ 307 (315)
+ ..|.-|.+... +.+..+. ........++|.|||.+.++.|+.+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 13444555321 1111111 1112356899999998878877654
No 352
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.77 E-value=25 Score=33.47 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=30.6
Q ss_pred cEEEEEEcCCCCeEEEEeCCCcEEEEecCccceehc
Q 021247 245 WVLSVDASPDGAAITTGSSDRTVKLWDLNMRAAMQS 280 (315)
Q Consensus 245 ~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 280 (315)
.+.++...++..++++-+.|+++|+|++.++..+.+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 466777888888999999999999999998876654
No 353
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=84.47 E-value=17 Score=30.37 Aligned_cols=200 Identities=11% Similarity=0.119 Sum_probs=109.4
Q ss_pred ceEEEEeCCCCCEEE--EeeC-------------CCeEEEEECCCC--ceeEEeeCC------cccEEEEEEC---CC--
Q 021247 62 GVVSVAAHPSGIIAA--SASL-------------DSFVRVFDVDTN--ASIATLEAS------PSEVWQMQFD---PK-- 113 (315)
Q Consensus 62 ~v~~~~~~~~g~~l~--s~~~-------------d~~i~~w~~~~~--~~~~~~~~~------~~~v~~~~~~---~~-- 113 (315)
.|..+.+.+++.+=+ +|-. --+|-+||+.++ +.+.++... ......++++ |.
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~ 167 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGD 167 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTT
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCC
Confidence 567777777665332 2211 125889999999 888877543 2346677776 32
Q ss_pred --CCeEEEEecCCCeEEEEecCCcceeeeecCC-CCCCCCCCc----cCCCCcceEEEEECCC----CCEEEEecCCC-c
Q 021247 114 --GTTLAVAGGGSASVKLWDTATWNLIATLSIP-RPEGLKPTD----KSSSKKFVLSVAWSPD----GRRIACGSMDG-T 181 (315)
Q Consensus 114 --~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~i~~~~~~~~----~~~l~~~s~dg-~ 181 (315)
+.+.+++-.....|.|||+.+++.-+..... .++...... ...-...+..|+++|+ ++.|.-....+ .
T Consensus 168 c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ 247 (381)
T 3q6k_A 168 CSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIK 247 (381)
T ss_dssp SCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSE
T ss_pred CCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCc
Confidence 3455566666789999999987665444210 011000000 0011235789999997 67776554443 3
Q ss_pred EEEEE---cccceeeee--ecCCc---cceEEEEEcCCCCcEEEEEeCCCeEEEEeCCC-C---eeEEEe--ecccccEE
Q 021247 182 ISVFD---VTRAKFLHH--LEGHF---MPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG-K---SLVTAM--SGHASWVL 247 (315)
Q Consensus 182 i~i~d---~~~~~~~~~--~~~~~---~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-~---~~~~~~--~~~~~~i~ 247 (315)
++-.. |+....... ..+.. ..-..++..+.++.++++--....|..|+.++ . .....+ ...-.++.
T Consensus 248 ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd 327 (381)
T 3q6k_A 248 VYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGT 327 (381)
T ss_dssp EEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEE
T ss_pred EEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccC
Confidence 33332 121111111 11112 12234455444677777778889999999876 1 111111 22445677
Q ss_pred EEEEcCCCCeEEEE
Q 021247 248 SVDASPDGAAITTG 261 (315)
Q Consensus 248 ~~~~~~~~~~l~s~ 261 (315)
.+.+.++|.+.+..
T Consensus 328 ~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 328 DISVDSKGGLWFMS 341 (381)
T ss_dssp EEEECTTSCEEEEE
T ss_pred eEEECCCCeEEEEE
Confidence 88877777654444
No 354
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=83.67 E-value=27 Score=32.07 Aligned_cols=263 Identities=11% Similarity=0.121 Sum_probs=138.7
Q ss_pred ccceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCcceeec-cccccceEEEEeCCCCCEEEEeeCCCeEEEEECCCC
Q 021247 14 EESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTN-TGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTN 92 (315)
Q Consensus 14 ~~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~~~~~~-~~h~~~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~ 92 (315)
...|+++.--. ...+-.|..+| +..||....+..... ......|.++....+|.+. .++.+| +..+|..+.
T Consensus 21 ~n~V~~I~qD~-----~G~lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g~lW-igT~~G-l~~yd~~~~ 92 (758)
T 3ott_A 21 ASVVSCFLQDS-----EGLIWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNTYLY-MGTDNG-ILVYNYRAD 92 (758)
T ss_dssp CCCEEEEEECT-----TSCEEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTTEEE-EEETTE-EEEEETTTT
T ss_pred cceEEEEEECC-----CCCEEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCCcEE-EEeCCC-eEEEeCCCC
Confidence 35788886433 23577777777 445764332211111 1123468888777777544 445554 788998765
Q ss_pred ceeEEeeCCcccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCE
Q 021247 93 ASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRR 172 (315)
Q Consensus 93 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 172 (315)
............|..+.. .++. +.++ ..+ -+..||..+.+.. .+... ... .....|.++...++|..
T Consensus 93 ~f~~~~~~~~~~i~~i~~-~~g~-lWig-t~~-Gl~~~~~~~~~~~-~~~~~-~~~-------l~~~~i~~i~~d~~g~l 159 (758)
T 3ott_A 93 RYEQPETDFPTDVRTMAL-QGDT-LWLG-ALN-GLYTYQLQSRKLT-SFDTR-RNG-------LPNNTIYSIIRTKDNQI 159 (758)
T ss_dssp EECCCSCCCCSCEEEEEE-ETTE-EEEE-ETT-EEEEEETTTCCEE-EECHH-HHC-------CSCSCEEEEEECTTCCE
T ss_pred EEECcccCCCceEEEEEe-cCCc-EEEE-cCC-cceeEeCCCCeEE-EeccC-CCC-------cCCCeEEEEEEcCCCCE
Confidence 322111112234666544 3443 4443 333 6778887654432 22100 000 11234778888777765
Q ss_pred EEEecCCCcEEEEEcccceeeeee-cC----CccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEeecccccEE
Q 021247 173 IACGSMDGTISVFDVTRAKFLHHL-EG----HFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMSGHASWVL 247 (315)
Q Consensus 173 l~~~s~dg~i~i~d~~~~~~~~~~-~~----~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~i~ 247 (315)
.+ |+.+ .+..+|..+++..... .. ....|.++...+ ++..|..|+. +-+..+|..+++......-....|.
T Consensus 160 Wi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~ 235 (758)
T 3ott_A 160 YV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDT-TRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIK 235 (758)
T ss_dssp EE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEET-TTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEE
T ss_pred EE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEEC-CCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEE
Confidence 54 4444 5778887766543211 11 122477777665 3343334443 4588899877654332211234588
Q ss_pred EEEEcCCCCeEEEEeCCCcEEEEecCccceehcc-------cccccceEEEEEeeCCCEEEEE
Q 021247 248 SVDASPDGAAITTGSSDRTVKLWDLNMRAAMQSM-------TNHTDQVWGVSFRPLGGRVVSV 303 (315)
Q Consensus 248 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-------~~~~~~v~~~~~s~~~~~l~s~ 303 (315)
++..+++|.+.+ |+.+| +.+++.......... .-....|.++....+|...+..
T Consensus 236 ~i~~d~~g~lWi-gT~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT 296 (758)
T 3ott_A 236 SLALDGNGDLLA-GTDNG-LYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGT 296 (758)
T ss_dssp EEEECTTCCEEE-EETTE-EEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEE
T ss_pred EEEEcCCCCEEE-EeCCc-eeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEe
Confidence 888888877544 45444 778887654322110 0112458888777777655443
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=73.82 E-value=5.6 Score=37.81 Aligned_cols=38 Identities=26% Similarity=0.345 Sum_probs=32.7
Q ss_pred ceEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEee
Q 021247 62 GVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLE 99 (315)
Q Consensus 62 ~v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~ 99 (315)
.+.++...++..++++.+.|+++|+|++.+++++.+.+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46677777888899999999999999999999887764
No 356
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=63.42 E-value=5.9 Score=38.55 Aligned_cols=38 Identities=26% Similarity=0.344 Sum_probs=30.9
Q ss_pred eEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeC
Q 021247 63 VVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEA 100 (315)
Q Consensus 63 v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~ 100 (315)
+.++...++..++++.+.|+++|+|++.+++++.+.+.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 34455556778999999999999999999999887653
No 357
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=62.55 E-value=17 Score=33.19 Aligned_cols=36 Identities=6% Similarity=0.106 Sum_probs=29.0
Q ss_pred eEEEEeCCCCCEEEEeeCCCeEEEEECCCCceeEEeeC
Q 021247 63 VVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEA 100 (315)
Q Consensus 63 v~~~~~~~~g~~l~s~~~d~~i~~w~~~~~~~~~~~~~ 100 (315)
|.++.+ +..++++-+.|+++|+|++.+++++.+.+.
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 444444 367999999999999999999998887665
No 358
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=61.39 E-value=19 Score=32.80 Aligned_cols=27 Identities=19% Similarity=0.343 Sum_probs=23.1
Q ss_pred CCCeEEEEeCCCcEEEEecCccceehc
Q 021247 254 DGAAITTGSSDRTVKLWDLNMRAAMQS 280 (315)
Q Consensus 254 ~~~~l~s~~~d~~i~iwd~~~~~~~~~ 280 (315)
+..++++-+.|.++|+|+++++..+.+
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t 256 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQD 256 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEe
Confidence 467999999999999999998876544
No 359
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=59.78 E-value=37 Score=33.01 Aligned_cols=36 Identities=14% Similarity=0.277 Sum_probs=29.7
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEEcccceeeeee
Q 021247 161 VLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHL 196 (315)
Q Consensus 161 i~~~~~~~~~~~l~~~s~dg~i~i~d~~~~~~~~~~ 196 (315)
+.+++..++..++++-+.|+++++|++.+++++...
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 455666677889999999999999999999877653
No 360
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=59.02 E-value=78 Score=26.35 Aligned_cols=193 Identities=9% Similarity=0.077 Sum_probs=104.5
Q ss_pred cEEEEEECCCCCeEEEEecC--------------CCeEEEEecCCc--ceeeeecCCCCCCCCCCccCCCCcceEEEEEC
Q 021247 104 EVWQMQFDPKGTTLAVAGGG--------------SASVKLWDTATW--NLIATLSIPRPEGLKPTDKSSSKKFVLSVAWS 167 (315)
Q Consensus 104 ~v~~~~~~~~~~~~~~~~~~--------------d~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 167 (315)
.|..+..++.+..-++=.+. --.|.+||+.+. +.++.+.++.... .....+..+++.
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~-------~~~S~l~di~VD 160 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLV-------EKPTYFGGFAVD 160 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGC-------CCGGGEEEEEEE
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhc-------ccCCccceEEEe
Confidence 46666666665544432221 136889999999 8999988764421 123457788877
Q ss_pred ---CC----CCEE-EEecCCCcEEEEEcccceeeeeecCC------------------ccceEEEEEcCC----CCcEEE
Q 021247 168 ---PD----GRRI-ACGSMDGTISVFDVTRAKFLHHLEGH------------------FMPVRSLVYSPV----DPRVLF 217 (315)
Q Consensus 168 ---~~----~~~l-~~~s~dg~i~i~d~~~~~~~~~~~~~------------------~~~v~~~~~~~~----~~~~l~ 217 (315)
|. +.++ ++=+..+.|.++|+.+++....+..+ ...+..|+++|. +..+.+
T Consensus 161 ~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf 240 (381)
T 3q6k_A 161 VANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYY 240 (381)
T ss_dssp ESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEE
T ss_pred cccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEE
Confidence 22 2233 34445778999999988765443211 124566777774 222333
Q ss_pred EEeCCCeEEEEe---CCCC---eeEEEeecc--cccEEEEEEc-CCCCeEEEEeCCCcEEEEecCc-c---ceehcccc-
Q 021247 218 SASDDTHVHMYD---AEGK---SLVTAMSGH--ASWVLSVDAS-PDGAAITTGSSDRTVKLWDLNM-R---AAMQSMTN- 283 (315)
Q Consensus 218 s~~~d~~i~~wd---~~~~---~~~~~~~~~--~~~i~~~~~~-~~~~~l~s~~~d~~i~iwd~~~-~---~~~~~~~~- 283 (315)
..-....+.--. ++.. ..+..+... ...-..++.+ .+|.++++--....|..|+... . +.+..+..
T Consensus 241 ~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d 320 (381)
T 3q6k_A 241 LAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTS 320 (381)
T ss_dssp EESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEEC
T ss_pred EECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEEC
Confidence 333333333322 1111 111222111 1233456675 5787778878888899999875 1 11222211
Q ss_pred -cccceEEEEEeeCCCEEEEE
Q 021247 284 -HTDQVWGVSFRPLGGRVVSV 303 (315)
Q Consensus 284 -~~~~v~~~~~s~~~~~l~s~ 303 (315)
.-..+..+++.++|...+..
T Consensus 321 ~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 321 SRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp TTCCSEEEEEECTTSCEEEEE
T ss_pred CCccccCeEEECCCCeEEEEE
Confidence 11246677776676544443
No 361
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=57.38 E-value=45 Score=29.55 Aligned_cols=60 Identities=13% Similarity=0.027 Sum_probs=39.0
Q ss_pred ccEEEEEEcCCCCeEEEEeC------------CCcEEEEecCccceehccccc-ccceEEEEEeeCCCEEEEE
Q 021247 244 SWVLSVDASPDGAAITTGSS------------DRTVKLWDLNMRAAMQSMTNH-TDQVWGVSFRPLGGRVVSV 303 (315)
Q Consensus 244 ~~i~~~~~~~~~~~l~s~~~------------d~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~ 303 (315)
.....|.|+++|.+.+.-.. ...|..++..+++....+... ...++.++|+||++.|+..
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 34678999999987663221 124556666556544433332 3468999999999988654
No 362
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=53.95 E-value=39 Score=30.11 Aligned_cols=58 Identities=16% Similarity=0.056 Sum_probs=36.8
Q ss_pred EEEEEEcCCCCeEEEEeCC------------CcEEEEecCccceehccccc-ccceEEEEEeeCCCEEEEE
Q 021247 246 VLSVDASPDGAAITTGSSD------------RTVKLWDLNMRAAMQSMTNH-TDQVWGVSFRPLGGRVVSV 303 (315)
Q Consensus 246 i~~~~~~~~~~~l~s~~~d------------~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~ 303 (315)
.-.|.|+|.|.+++.-..+ ..+.+.+..+++...-+.++ ..+++.+.|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4568999999866543322 23444455555543333333 3579999999999988654
No 363
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=53.44 E-value=80 Score=24.79 Aligned_cols=150 Identities=10% Similarity=0.017 Sum_probs=84.6
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEE---cccceeeeeecCCccceEEEEEcCC-CCcEEEEEeCCCeEEEEeCCCCe--
Q 021247 161 VLSVAWSPDGRRIACGSMDGTISVFD---VTRAKFLHHLEGHFMPVRSLVYSPV-DPRVLFSASDDTHVHMYDAEGKS-- 234 (315)
Q Consensus 161 i~~~~~~~~~~~l~~~s~dg~i~i~d---~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~d~~i~~wd~~~~~-- 234 (315)
+..+.-.....+|+..+..|.++.-. +...+...-+. ....|..+.- +. +...++..+.+|.++...+....
T Consensus 26 ~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~ 103 (276)
T 3no0_A 26 VVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYK 103 (276)
T ss_dssp EEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTC
T ss_pred EEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhh
Confidence 33333333445666667778766543 32222111122 2344555433 32 45689999999999988754321
Q ss_pred --eEE--EeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccce---------ehcccccccceEEEEEeeCCCEEE
Q 021247 235 --LVT--AMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRAA---------MQSMTNHTDQVWGVSFRPLGGRVV 301 (315)
Q Consensus 235 --~~~--~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~---------~~~~~~~~~~v~~~~~s~~~~~l~ 301 (315)
-+. .+. ..+.+..+........++..+.+|.+..+....-.. .-.+. ..+.|.++...+++..++
T Consensus 104 ~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll 181 (276)
T 3no0_A 104 AQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLL 181 (276)
T ss_dssp STTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEE
T ss_pred cCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEE
Confidence 011 112 234455555554556788889999988887543111 11122 235666666556667899
Q ss_pred EEeCCCcEEEeec
Q 021247 302 SVSDDKSISLYEY 314 (315)
Q Consensus 302 s~~~d~~i~i~~~ 314 (315)
..+..|.++...+
T Consensus 182 ~~T~~G~~kr~~~ 194 (276)
T 3no0_A 182 VITAKGRVKKISH 194 (276)
T ss_dssp EEETTSCEEEEEG
T ss_pred EEeCCCcEEEeEH
Confidence 9999998877654
No 364
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=51.29 E-value=1e+02 Score=25.36 Aligned_cols=141 Identities=10% Similarity=0.009 Sum_probs=69.0
Q ss_pred ceEEEEECCC--CCEEEEecCCCcEEEEEcccceeeeeec-------------------CCccceEEEEEcCCCCcEEEE
Q 021247 160 FVLSVAWSPD--GRRIACGSMDGTISVFDVTRAKFLHHLE-------------------GHFMPVRSLVYSPVDPRVLFS 218 (315)
Q Consensus 160 ~i~~~~~~~~--~~~l~~~s~dg~i~i~d~~~~~~~~~~~-------------------~~~~~v~~~~~~~~~~~~l~s 218 (315)
.|.++++.|. ...+.+++..+.|...+-. ++....+. .....+.++.+.|.++..+..
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~Dg-G~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRSTDH-GASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEESST-TSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEcCC-CCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 4778899872 4566666666666555322 22111111 012357788898855555555
Q ss_pred EeCCCeEEEEeCCCCeeEEEee---c-c--------cccEEEEEEcCC-CCeEEEEeCCCcEEEEecCccceehcccc--
Q 021247 219 ASDDTHVHMYDAEGKSLVTAMS---G-H--------ASWVLSVDASPD-GAAITTGSSDRTVKLWDLNMRAAMQSMTN-- 283 (315)
Q Consensus 219 ~~~d~~i~~wd~~~~~~~~~~~---~-~--------~~~i~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-- 283 (315)
+..++.|...+-.+.+-..... . + ...+..+.++|. ...|..+...+ |...+- .++.+..+..
T Consensus 195 g~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D-~G~tW~~~~~~l 272 (394)
T 3b7f_A 195 GMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDR-REGVWKRIGDAM 272 (394)
T ss_dssp EEETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEET-TTTEEECGGGGS
T ss_pred EECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCC-CCCcceECCCCC
Confidence 5544545544332222211110 0 0 124788999985 35566666544 443332 2333322221
Q ss_pred cc---cceEEEEEeeC-CCEEEEE
Q 021247 284 HT---DQVWGVSFRPL-GGRVVSV 303 (315)
Q Consensus 284 ~~---~~v~~~~~s~~-~~~l~s~ 303 (315)
.. ..+..+.++|. ...|..+
T Consensus 273 ~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 273 PREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp CTTTCSCEEEEEECSSCTTCEEEE
T ss_pred CCCCccceEEEEECCCCCCEEEEE
Confidence 11 23567788763 3344433
No 365
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=49.67 E-value=81 Score=28.08 Aligned_cols=60 Identities=22% Similarity=0.251 Sum_probs=36.9
Q ss_pred EEEEEECCCCCeEEEEecC-----------CCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEE
Q 021247 105 VWQMQFDPKGTTLAVAGGG-----------SASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI 173 (315)
Q Consensus 105 v~~~~~~~~~~~~~~~~~~-----------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 173 (315)
.-.|.|+|.|..++..-+. +..+.+.+..+++....+..+. ...++.++|+||++.|
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~------------gaE~TG~~fspDg~tl 545 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI------------GCEVTGISFSPDQKTL 545 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCT------------TCEEEEEEECTTSSEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCC------------CccCcCeeECCCCCEE
Confidence 4678899999855433211 1345556665555544443321 2348899999999877
Q ss_pred EEe
Q 021247 174 ACG 176 (315)
Q Consensus 174 ~~~ 176 (315)
++.
T Consensus 546 fvn 548 (592)
T 3zwu_A 546 FVG 548 (592)
T ss_dssp EEE
T ss_pred EEE
Confidence 655
No 366
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=47.59 E-value=1.5e+02 Score=26.38 Aligned_cols=61 Identities=16% Similarity=0.051 Sum_probs=41.1
Q ss_pred cceEEEEeCCCCCEEEEeeC------------CCeEEEEECCCCceeEEeeC-CcccEEEEEECCCCCeEEEEe
Q 021247 61 LGVVSVAAHPSGIIAASASL------------DSFVRVFDVDTNASIATLEA-SPSEVWQMQFDPKGTTLAVAG 121 (315)
Q Consensus 61 ~~v~~~~~~~~g~~l~s~~~------------d~~i~~w~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~ 121 (315)
.....|.|.++|.+.++... ...+..++..+++....+.. ...++..++|+|+++.++++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 35678999999988774322 11455566666665444433 235789999999999887764
No 367
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=40.19 E-value=2.3e+02 Score=26.22 Aligned_cols=157 Identities=14% Similarity=0.118 Sum_probs=73.4
Q ss_pred cccEEEEEECCCCCeEEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCC-CCEEEEecCC-
Q 021247 102 PSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD-GRRIACGSMD- 179 (315)
Q Consensus 102 ~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~s~d- 179 (315)
...|..+.++|....+++++...+.|...+-....... +..... ...-....+..++++|. .+.++++..+
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~-~~~~~~------~~~~~~~~i~~ia~dp~~~~~i~~~~g~~ 86 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIP-LNDFIE------AQDMNIMGTESIALDPNNPDRLYLAQGRY 86 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEE-SCTTCC------GGGGGGCSEEEEEEETTEEEEEEEEECSC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeE-CccCCC------cccccCCceeEEEECCCCCCEEEEEeCcc
Confidence 35788999999765555666666666555432222211 110000 00001224889999884 3344443322
Q ss_pred -----CcEEEEEcccceeeeeecC---------CccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCeeEEEee-----
Q 021247 180 -----GTISVFDVTRAKFLHHLEG---------HFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSLVTAMS----- 240 (315)
Q Consensus 180 -----g~i~i~d~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~----- 240 (315)
+.| +.....++....+.. ....+..++++|.++..++.+...+.|.. ....++--....
T Consensus 87 ~~~~~~~v-~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~ 164 (789)
T 1sqj_A 87 VGDEWAAF-YVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDA 164 (789)
T ss_dssp TTSSCCEE-EEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCC
T ss_pred CCCcccEE-EEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCccc
Confidence 222 222233333222211 00124567888876677777764443321 122222111111
Q ss_pred -cccccEEEEEEcCC-CCeEEEEeCC-CcE
Q 021247 241 -GHASWVLSVDASPD-GAAITTGSSD-RTV 267 (315)
Q Consensus 241 -~~~~~i~~~~~~~~-~~~l~s~~~d-~~i 267 (315)
.....+..+.++|. +..++.+..+ +.|
T Consensus 165 ~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v 194 (789)
T 1sqj_A 165 FTNGIGYTSVIFDPERNGTIYASATAPQGM 194 (789)
T ss_dssp CSTTTCEEEEEECTTSTTCEEEEESSTTCE
T ss_pred cCCCCCeEEEEECCCCCCEEEEEEcCCCeE
Confidence 11245778888884 4456656554 444
No 368
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=36.80 E-value=2.5e+02 Score=25.67 Aligned_cols=60 Identities=20% Similarity=0.329 Sum_probs=37.1
Q ss_pred ceEEEEECCCC-CEEEEecCCCcEEEEEcccceeeeeecCC-------ccceEEEEEcCCCCcEEEEEe
Q 021247 160 FVLSVAWSPDG-RRIACGSMDGTISVFDVTRAKFLHHLEGH-------FMPVRSLVYSPVDPRVLFSAS 220 (315)
Q Consensus 160 ~i~~~~~~~~~-~~l~~~s~dg~i~i~d~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~s~~ 220 (315)
+|..++++|.. ..+.++...+.|+..+-. ++....+..+ ...+.+++++|.++..++.+.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~-G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~ 91 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPS-TETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVA 91 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETT-TTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEE
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCC-CCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEe
Confidence 58899999863 566677766777666533 2222222221 246889999987665555443
No 369
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=36.51 E-value=89 Score=20.47 Aligned_cols=25 Identities=12% Similarity=0.040 Sum_probs=14.9
Q ss_pred EEEEcCCCCeEEEEeCCCcEEEEecCc
Q 021247 248 SVDASPDGAAITTGSSDRTVKLWDLNM 274 (315)
Q Consensus 248 ~~~~~~~~~~l~s~~~d~~i~iwd~~~ 274 (315)
.+.+..+|.+++... ++.+ +|.-.+
T Consensus 60 ~l~l~~dGNLVl~d~-~~~~-iW~S~t 84 (113)
T 3mez_B 60 FMRLGHSGELDITDD-RLNT-VFVSNT 84 (113)
T ss_dssp EEEECTTSCEEEECT-TSCE-EEECSC
T ss_pred EEEEeCCCcEEEECC-CCCE-EEECCC
Confidence 466777787766533 4444 676544
No 370
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=26.54 E-value=3.8e+02 Score=24.69 Aligned_cols=156 Identities=13% Similarity=0.126 Sum_probs=73.7
Q ss_pred cceEEEEeCCCC-CEEEEeeCCCeEEEEECCCCceeEEeeCC-------cccEEEEEECCCCCeEEEEecCCCe----EE
Q 021247 61 LGVVSVAAHPSG-IIAASASLDSFVRVFDVDTNASIATLEAS-------PSEVWQMQFDPKGTTLAVAGGGSAS----VK 128 (315)
Q Consensus 61 ~~v~~~~~~~~g-~~l~s~~~d~~i~~w~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~d~~----i~ 128 (315)
..|..|.++|.. ..+..+...+.|...+ +.++.-..+... ...+..++++|.....++.+..... -.
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 478899999863 4555666666665544 334433333221 2368999999865333333322211 23
Q ss_pred EEecC-CcceeeeecCCCCCCCCCCccCCCCcceEEEEECCC-CCEEEEecCCCcEEEEEcccceeeeeecC------Cc
Q 021247 129 LWDTA-TWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPD-GRRIACGSMDGTISVFDVTRAKFLHHLEG------HF 200 (315)
Q Consensus 129 ~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~s~dg~i~i~d~~~~~~~~~~~~------~~ 200 (315)
||-.. .++.-.....+..... .......+..++++|. .+.+.++...+.|.. ....++....+.. ..
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~----~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~~~~~ 168 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGA----NDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDAFTNG 168 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCT----TSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCCCSTT
T ss_pred EEEECCCCCcceeccCCcccCc----cCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCccccCCC
Confidence 33322 2222112211111000 0001112446777774 456666664444322 2222332222221 12
Q ss_pred cceEEEEEcCCCCcEEEEEeCC
Q 021247 201 MPVRSLVYSPVDPRVLFSASDD 222 (315)
Q Consensus 201 ~~v~~~~~~~~~~~~l~s~~~d 222 (315)
..+..+.++|.++..++.+..+
T Consensus 169 ~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 169 IGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TCEEEEEECTTSTTCEEEEESS
T ss_pred CCeEEEEECCCCCCEEEEEEcC
Confidence 4577888988766666666554
No 371
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=26.05 E-value=2.5e+02 Score=22.32 Aligned_cols=143 Identities=14% Similarity=0.122 Sum_probs=80.5
Q ss_pred CCCEEEEecCCCcEEEEEccc-------ceeeeeecCCccceEEEEEcCCCCcEEEEEeCCCeEEEEeCCCCee------
Q 021247 169 DGRRIACGSMDGTISVFDVTR-------AKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEGKSL------ 235 (315)
Q Consensus 169 ~~~~l~~~s~dg~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~------ 235 (315)
++.+++..+.+|.++-..+.. +.....+..+ ..+..+.... +...++..+.+|.+..+....-..
T Consensus 108 ~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~-~~~~i~l~T~~G~~irf~~~~v~~~gr~a~ 185 (307)
T 1zi0_A 108 EGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTS-GEDEVMLFSAEGKVVRFKESSVRAMGCNTT 185 (307)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEEC-TTCEEEEEETTSEEEEEEGGGSCBCCTTCC
T ss_pred CCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeC-CCCEEEEECCCCcEEEEEHHHcCccCCCCC
Confidence 456788889999999987642 1111223333 4444444443 344577778888887776432111
Q ss_pred -EEEee-cccccEEEEEEcCCCCeEEEEeCCCcEEEEecCccc---------eehcccccccceEEEEEeeCCCEEEEEe
Q 021247 236 -VTAMS-GHASWVLSVDASPDGAAITTGSSDRTVKLWDLNMRA---------AMQSMTNHTDQVWGVSFRPLGGRVVSVS 304 (315)
Q Consensus 236 -~~~~~-~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~---------~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 304 (315)
+..+. .....|.++...+++..+++.+..|.++-.++..-. ....+....+.+-++....+...|+..+
T Consensus 186 Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t 265 (307)
T 1zi0_A 186 GVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMIT 265 (307)
T ss_dssp CEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEE
T ss_pred CeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEc
Confidence 11111 123456666655556678888999999988774211 1111222234555554444445677777
Q ss_pred CCCcEEEee
Q 021247 305 DDKSISLYE 313 (315)
Q Consensus 305 ~d~~i~i~~ 313 (315)
.+|.+.-+.
T Consensus 266 ~~g~~ir~~ 274 (307)
T 1zi0_A 266 DAGTLVRTR 274 (307)
T ss_dssp SSCCEEEEE
T ss_pred CCCcEEEEe
Confidence 777765554
No 372
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=25.42 E-value=2.7e+02 Score=22.46 Aligned_cols=160 Identities=9% Similarity=0.020 Sum_probs=0.0
Q ss_pred cCCCCcceEEEEECCCCCEEEEecCCCcEEEEEc---------cccee---eeeecCCccceEEEEEcCC-CCcEEEEEe
Q 021247 154 KSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV---------TRAKF---LHHLEGHFMPVRSLVYSPV-DPRVLFSAS 220 (315)
Q Consensus 154 ~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~---------~~~~~---~~~~~~~~~~v~~~~~~~~-~~~~l~s~~ 220 (315)
.....+.+..+........|+.-+..|.++.... ..+.. +-.+......+..+...+. +..+++..+
T Consensus 37 ~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T 116 (327)
T 3uc1_A 37 GLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLAT 116 (327)
T ss_dssp CCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEE
T ss_pred ccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEc
Q ss_pred CCCeEEEEeCCC-------CeeEEEeecccccEEEEEEcCCCCeEEEEeCCCcEEEEecC-----------ccceehccc
Q 021247 221 DDTHVHMYDAEG-------KSLVTAMSGHASWVLSVDASPDGAAITTGSSDRTVKLWDLN-----------MRAAMQSMT 282 (315)
Q Consensus 221 ~d~~i~~wd~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d~~i~iwd~~-----------~~~~~~~~~ 282 (315)
.+|.++.-.+.. +...-.+.. .+.+..+........|+..+.+|.+..+... .|...-.+
T Consensus 117 ~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L- 194 (327)
T 3uc1_A 117 RNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRF- 194 (327)
T ss_dssp TTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCC-
T ss_pred CCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecC-
Q ss_pred ccccceEEEEEeeCCCEEEEEeCCCcEEEeecC
Q 021247 283 NHTDQVWGVSFRPLGGRVVSVSDDKSISLYEYS 315 (315)
Q Consensus 283 ~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~~ 315 (315)
...+.|.++...+.+.+|+.++..|.++.-.++
T Consensus 195 ~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 195 NIDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp CTTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred CCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
No 373
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=22.72 E-value=2.9e+02 Score=21.97 Aligned_cols=191 Identities=11% Similarity=0.068 Sum_probs=101.8
Q ss_pred EEEEecCCCeEEEEecCCcceeeeecCCCCCCCCCCccCCCCcceEEEEECCCCCEEEEecCCCcEEEEEccc---c---
Q 021247 117 LAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTR---A--- 190 (315)
Q Consensus 117 ~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~s~dg~i~i~d~~~---~--- 190 (315)
+++..+.+|.|+--.+...+.... ...+... ......+.+..+........++..+..|.++-+.... .
T Consensus 10 ~~v~~T~~G~iKr~~~~~~~~~~~----~~~g~~~-~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 10 IVVMLTKKGFLKRLSQNEYKLQGT----GGKGLSS-FDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp EEEEEETTCBEEEEEGGGSCBCCS----SCCCEEC-CCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred EEEEEeCCCEEEEeEHHHhhcccc----CCCCcee-cccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 345567889998776654321100 0000000 0111223344544444556777788889877776531 1
Q ss_pred ---eee---eeecCCccceEEEEEcCC--CCcEEEEEeCCCeEEEEeCCCCe-------eEEEeecccccEEEEEEcCCC
Q 021247 191 ---KFL---HHLEGHFMPVRSLVYSPV--DPRVLFSASDDTHVHMYDAEGKS-------LVTAMSGHASWVLSVDASPDG 255 (315)
Q Consensus 191 ---~~~---~~~~~~~~~v~~~~~~~~--~~~~l~s~~~d~~i~~wd~~~~~-------~~~~~~~~~~~i~~~~~~~~~ 255 (315)
..+ -.+.. ...|..+...+. +...++..+..|.++.-.+.... ..-.+.. .+.+..+.....+
T Consensus 85 ~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~ 162 (312)
T 1suu_A 85 SKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKD 162 (312)
T ss_dssp ---CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTT
T ss_pred CCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCC
Confidence 110 01221 123433332221 34578888999999887753221 1112222 4455555554445
Q ss_pred CeEEEEeCCCcEEEEecCccce-------ehccc-ccccceEEEEEeeCCCEEEEEeCCCcEEEeec
Q 021247 256 AAITTGSSDRTVKLWDLNMRAA-------MQSMT-NHTDQVWGVSFRPLGGRVVSVSDDKSISLYEY 314 (315)
Q Consensus 256 ~~l~s~~~d~~i~iwd~~~~~~-------~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~i~i~~~ 314 (315)
..++..+.+|.+..+....-.. ...+. ...+.|.++..-.++..|+..+..|..+.+.+
T Consensus 163 ~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~ 229 (312)
T 1suu_A 163 EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNM 229 (312)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEG
T ss_pred CEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEH
Confidence 6788889999998887753111 11111 12456666665555677889999998887765
No 374
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=22.52 E-value=1.7e+02 Score=19.06 Aligned_cols=23 Identities=9% Similarity=0.286 Sum_probs=11.4
Q ss_pred EEEEcCCCCeEEEEeCCCcEEEEe
Q 021247 248 SVDASPDGAAITTGSSDRTVKLWD 271 (315)
Q Consensus 248 ~~~~~~~~~~l~s~~~d~~i~iwd 271 (315)
.+.+..+|.+++... ++.+.+|.
T Consensus 53 ~l~l~~dGNLVl~~~-~~~~~vW~ 75 (111)
T 3mez_A 53 TLRLNNRGQLEIHSA-NSNTPVWV 75 (111)
T ss_dssp EEEECTTSCEEEECS-SCSSCSEE
T ss_pred EEEEcCCCcEEEEeC-CCCEEEEE
Confidence 355666676555432 33333563
No 375
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=21.89 E-value=3.7e+02 Score=22.89 Aligned_cols=104 Identities=18% Similarity=0.176 Sum_probs=58.1
Q ss_pred cceEEEEEeecCCCCCcEEEEeeCCCcEEEEcCCCCc---ceeec-----cc----cccceEEEEeCCC----CCEEEEe
Q 021247 15 ESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQ---LERTN-----TG----HCLGVVSVAAHPS----GIIAASA 78 (315)
Q Consensus 15 ~~v~~v~~~~~~~~~~~~l~sgs~d~~v~~w~~~~~~---~~~~~-----~~----h~~~v~~~~~~~~----g~~l~s~ 78 (315)
+.-+.++|.|++.. .++.+...|.|++++.+... ....+ .+ ...+...++++|+ +.+.++-
T Consensus 14 ~~P~~~a~~pdG~~---rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~y 90 (463)
T 2wg3_C 14 RQPVGALHSGDGSQ---RLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSY 90 (463)
T ss_dssp SSEEEEECCSSSSC---CEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEE
T ss_pred CCceEEEECCCCCe---EEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEE
Confidence 46689999987631 25666788999999754321 11111 11 1457889999996 5555543
Q ss_pred eCC------------CeEEEEECCCC----------ceeEEee--CCcccEEEEEECCCCCeEEEEe
Q 021247 79 SLD------------SFVRVFDVDTN----------ASIATLE--ASPSEVWQMQFDPKGTTLAVAG 121 (315)
Q Consensus 79 ~~d------------~~i~~w~~~~~----------~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~ 121 (315)
+.+ ..|.-|.+..+ +.+..+. ...-....+.|.|++..++.+|
T Consensus 91 t~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~G 157 (463)
T 2wg3_C 91 TTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILG 157 (463)
T ss_dssp EECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEEC
T ss_pred eCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeC
Confidence 321 13434555421 1222222 1112357899999997554444
No 376
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=21.48 E-value=3.3e+02 Score=24.67 Aligned_cols=56 Identities=18% Similarity=0.251 Sum_probs=36.2
Q ss_pred EEEEEeCCCeEE-EEeCCCC------e-eEEEee--cccccEEEEEEcCCCCeEEEEeCCCcEEEE
Q 021247 215 VLFSASDDTHVH-MYDAEGK------S-LVTAMS--GHASWVLSVDASPDGAAITTGSSDRTVKLW 270 (315)
Q Consensus 215 ~l~s~~~d~~i~-~wd~~~~------~-~~~~~~--~~~~~i~~~~~~~~~~~l~s~~~d~~i~iw 270 (315)
.++.|+++|.|+ +...... . ++..+. ....+|..+.++++.+.|..++.++.++|=
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kVP 496 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQLP 496 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEEE
Confidence 577888888874 3322111 1 222222 345678899999999999999888766653
Done!