BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>021248
MQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVIN
NACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPE
PFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQP
VIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTS
FEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQL
KPLIEKAKQKTSSSS

High Scoring Gene Products

Symbol, full name Information P value
UCH2
AT1G65650
protein from Arabidopsis thaliana 8.9e-125
UCH1
AT5G16310
protein from Arabidopsis thaliana 4.1e-113
uch2
ubiquitin C-terminal hydrolase
gene from Dictyostelium discoideum 1.4e-69
UCHL5
Ubiquitin carboxyl-terminal hydrolase isozyme L5
protein from Homo sapiens 6.0e-64
UCHL5
Ubiquitin carboxyl-terminal hydrolase isozyme L5
protein from Homo sapiens 9.7e-64
UCHL5
Uncharacterized protein
protein from Gallus gallus 2.3e-62
CG31639 protein from Drosophila melanogaster 1.3e-61
Uch-L5
Ubiquitin carboxy-terminal hydrolase L5 ortholog
protein from Drosophila melanogaster 1.3e-61
UCHL5
Ubiquitin carboxyl-terminal hydrolase isozyme L5
protein from Bos taurus 8.6e-56
UCHL5
Uncharacterized protein
protein from Canis lupus familiaris 2.3e-55
LOC100511033
Uncharacterized protein
protein from Sus scrofa 2.3e-55
UCHL5
Ubiquitin carboxyl-terminal hydrolase isozyme L5
protein from Sus scrofa 2.3e-55
UCHL5
Ubiquitin carboxyl-terminal hydrolase isozyme L5
protein from Homo sapiens 2.9e-55
UCHL5
Ubiquitin carboxyl-terminal hydrolase isozyme L5
protein from Homo sapiens 2.9e-55
Uchl5
ubiquitin carboxyl-terminal hydrolase L5
gene from Rattus norvegicus 3.7e-55
UCHL5
Uncharacterized protein
protein from Gallus gallus 4.8e-55
Uchl5
ubiquitin carboxyl-terminal esterase L5
protein from Mus musculus 4.8e-55
uchl5
ubiquitin carboxyl-terminal hydrolase L5
gene_product from Danio rerio 8.9e-54
Uch-L5R
Uch-L5-related
protein from Drosophila melanogaster 8.7e-53
Bap1
BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)
gene from Rattus norvegicus 3.8e-51
BAP1
Uncharacterized protein
protein from Sus scrofa 5.2e-51
BAP1
Uncharacterized protein
protein from Canis lupus familiaris 8.9e-51
BAP1
Ubiquitin carboxyl-terminal hydrolase BAP1
protein from Homo sapiens 8.9e-51
Bap1
Brca1 associated protein 1
protein from Mus musculus 2.0e-50
BAP1
Ubiquitin carboxyl-terminal hydrolase BAP1
protein from Gallus gallus 2.4e-50
bap1
Ubiquitin carboxyl-terminal hydrolase BAP1
protein from Xenopus (Silurana) tropicalis 2.5e-50
bap1
BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)
gene_product from Danio rerio 1.5e-49
BAP1
Ubiquitin carboxyl-terminal hydrolase BAP1
protein from Gallus gallus 2.1e-49
BAP1
Ubiquitin carboxyl-terminal hydrolase BAP1
protein from Branchiostoma floridae 1.5e-47
BAP1
Uncharacterized protein
protein from Canis lupus familiaris 5.5e-47
BAP1
Ubiquitin carboxyl-terminal hydrolase BAP1
protein from Homo sapiens 2.6e-46
BAP1
Ubiquitin carboxyl-terminal hydrolase BAP1
protein from Bos taurus 3.7e-46
UCHL5
Ubiquitin carboxyl-terminal hydrolase isozyme L5
protein from Sus scrofa 1.0e-45
BAP1
Ubiquitin carboxyl-terminal hydrolase BAP1
protein from Bos taurus 3.1e-45
v1g217532
Predicted protein
protein from Nematostella vectensis 7.1e-45
calypso
Ubiquitin carboxyl-terminal hydrolase calypso
protein from Aedes aegypti 7.6e-44
bap1
Ubiquitin carboxyl-terminal hydrolase BAP1
protein from Xenopus laevis 1.2e-42
ubh-4 gene from Caenorhabditis elegans 8.4e-42
calypso
Ubiquitin carboxyl-terminal hydrolase calypso
protein from Drosophila ananassae 5.7e-38
calypso protein from Drosophila melanogaster 1.9e-37
calypso
Ubiquitin carboxyl-terminal hydrolase calypso
protein from Drosophila sechellia 1.9e-37
calypso
Ubiquitin carboxyl-terminal hydrolase calypso
protein from Drosophila yakuba 1.9e-37
calypso
Ubiquitin carboxyl-terminal hydrolase calypso
protein from Drosophila simulans 1.9e-37
calypso
Ubiquitin carboxyl-terminal hydrolase calypso
protein from Drosophila erecta 2.4e-37
calypso
Ubiquitin carboxyl-terminal hydrolase calypso
protein from Drosophila persimilis 6.4e-37
calypso
Ubiquitin carboxyl-terminal hydrolase calypso
protein from Drosophila pseudoobscura pseudoobscura 6.4e-37
calypso
Ubiquitin carboxyl-terminal hydrolase calypso
protein from Culex quinquefasciatus 1.7e-36
UCHL5
Ubiquitin carboxyl-terminal hydrolase isozyme L5
protein from Homo sapiens 4.0e-35
UCHL5
Ubiquitin carboxyl-terminal hydrolase isozyme L5
protein from Homo sapiens 6.0e-32
UCHL5
Ubiquitin carboxyl-terminal hydrolase isozyme L5
protein from Homo sapiens 7.7e-32
calypso
Ubiquitin carboxyl-terminal hydrolase calypso
protein from Drosophila virilis 1.3e-31
calypso
Ubiquitin carboxyl-terminal hydrolase calypso
protein from Drosophila grimshawi 3.3e-31
calypso
Ubiquitin carboxyl-terminal hydrolase calypso
protein from Drosophila mojavensis 6.9e-31
BAP1
Ubiquitin carboxyl-terminal hydrolase BAP1
protein from Homo sapiens 4.4e-29
UCHL5
Ubiquitin carboxyl-terminal hydrolase isozyme L5
protein from Homo sapiens 4.2e-24
UCHL5
Ubiquitin carboxyl-terminal hydrolase isozyme L5
protein from Homo sapiens 1.8e-16
Uch
Ubiquitin carboxy-terminal hydrolase
protein from Drosophila melanogaster 7.0e-15
UCHL5
Ubiquitin carboxyl-terminal hydrolase isozyme L5
protein from Homo sapiens 4.7e-14
UCHL3
Ubiquitin carboxyl-terminal hydrolase isozyme L3
protein from Bos taurus 6.2e-14
UCHL3
Ubiquitin carboxyl-terminal hydrolase isozyme L3
protein from Homo sapiens 8.0e-14
Uchl3
ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)
protein from Mus musculus 8.0e-14
UCHL3
Ubiquitin carboxyl-terminal hydrolase isozyme L3
protein from Sus scrofa 1.1e-13
Uchl3
ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)
gene from Rattus norvegicus 1.8e-13
Uchl3-ps1
ubiquitin carboxyl-terminal esterase L3, pseudogene 1
gene from Rattus norvegicus 1.8e-13
uchl1
ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
gene_product from Danio rerio 3.1e-13
UCHL3
Uncharacterized protein
protein from Gallus gallus 6.8e-13
Uchl4
ubiquitin carboxyl-terminal esterase L4
protein from Mus musculus 6.8e-13
UCHL3
Ubiquitin carboxyl-terminal hydrolase isozyme L3
protein from Sus scrofa 1.5e-12
UCHL1
Uncharacterized protein
protein from Canis lupus familiaris 3.3e-12
Uchl1
ubiquitin carboxy-terminal hydrolase L1
protein from Mus musculus 3.3e-12
Uchl1
ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
gene from Rattus norvegicus 3.3e-12
UCHL1
Uncharacterized protein
protein from Gallus gallus 4.3e-12
UCHL3
Uncharacterized protein
protein from Canis lupus familiaris 5.6e-12
UCHL1
Ubiquitin carboxyl-terminal hydrolase isozyme L1
protein from Sus scrofa 7.2e-12
uchl3
ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)
gene_product from Danio rerio 1.7e-11
uch1
ubiquitin C-terminal hydrolase
gene from Dictyostelium discoideum 4.8e-11
UCHL1
Ubiquitin carboxyl-terminal hydrolase isozyme L1
protein from Homo sapiens 6.3e-11
UCH3
AT4G17510
protein from Arabidopsis thaliana 7.9e-11
UCHL1
Ubiquitin carboxyl-terminal hydrolase isozyme L1
protein from Bos taurus 8.2e-11
UCHL1
Uncharacterized protein
protein from Canis lupus familiaris 2.2e-09
UCHL3
Uncharacterized protein
protein from Canis lupus familiaris 1.1e-08
UCHL3
Ubiquitin carboxyl-terminal hydrolase isozyme L3
protein from Homo sapiens 1.1e-08
orf19.6272 gene_product from Candida albicans 4.6e-08
UCHL1
Ubiquitin carboxyl-terminal hydrolase isozyme L1
protein from Homo sapiens 7.8e-08
UCHL1
Ubiquitin carboxyl-terminal hydrolase isozyme L1
protein from Sus scrofa 2.2e-07
ubh-1 gene from Caenorhabditis elegans 0.00016

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021248
        (315 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2018516 - symbol:UCH2 species:3702 "Arabidopsi...  1226  8.9e-125  1
TAIR|locus:2171312 - symbol:UCH1 species:3702 "Arabidopsi...  1116  4.1e-113  1
DICTYBASE|DDB_G0285527 - symbol:uch2 "ubiquitin C-termina...   705  1.4e-69   1
UNIPROTKB|Q5LJA9 - symbol:UCHL5 "Ubiquitin carboxyl-termi...   652  6.0e-64   1
UNIPROTKB|Q5LJA5 - symbol:UCHL5 "Ubiquitin carboxyl-termi...   650  9.7e-64   1
UNIPROTKB|F1P541 - symbol:UCHL5 "Uncharacterized protein"...   489  2.3e-62   2
FB|FBgn0051639 - symbol:CG31639 species:7227 "Drosophila ...   496  1.3e-61   2
FB|FBgn0011327 - symbol:Uch-L5 "Ubiquitin carboxy-termina...   496  1.3e-61   2
UNIPROTKB|Q9XSJ0 - symbol:UCHL5 "Ubiquitin carboxyl-termi...   575  8.6e-56   1
UNIPROTKB|E2QWM9 - symbol:UCHL5 "Uncharacterized protein"...   571  2.3e-55   1
UNIPROTKB|F1SAA9 - symbol:LOC100511033 "Uncharacterized p...   571  2.3e-55   1
UNIPROTKB|Q06AT3 - symbol:UCHL5 "Ubiquitin carboxyl-termi...   571  2.3e-55   1
UNIPROTKB|Q9Y5K5 - symbol:UCHL5 "Ubiquitin carboxyl-termi...   570  2.9e-55   1
UNIPROTKB|Q5LJB0 - symbol:UCHL5 "Ubiquitin carboxyl-termi...   570  2.9e-55   1
RGD|1305414 - symbol:Uchl5 "ubiquitin carboxyl-terminal h...   569  3.7e-55   1
UNIPROTKB|E1BU61 - symbol:UCHL5 "Uncharacterized protein"...   568  4.8e-55   1
MGI|MGI:1914848 - symbol:Uchl5 "ubiquitin carboxyl-termin...   568  4.8e-55   1
ZFIN|ZDB-GENE-040426-2051 - symbol:uchl5 "ubiquitin carbo...   556  8.9e-54   1
FB|FBgn0030370 - symbol:Uch-L5R "Uch-L5-related" species:...   435  8.7e-53   2
RGD|1311938 - symbol:Bap1 "BRCA1 associated protein-1 (ub...   466  3.8e-51   2
UNIPROTKB|F1SIW6 - symbol:BAP1 "Ubiquitin carboxyl-termin...   465  5.2e-51   2
UNIPROTKB|E2R3W8 - symbol:BAP1 "Uncharacterized protein" ...   463  8.9e-51   2
UNIPROTKB|Q92560 - symbol:BAP1 "Ubiquitin carboxyl-termin...   463  8.9e-51   2
MGI|MGI:1206586 - symbol:Bap1 "Brca1 associated protein 1...   460  2.0e-50   2
UNIPROTKB|F1NVF5 - symbol:BAP1 "Ubiquitin carboxyl-termin...   457  2.4e-50   2
UNIPROTKB|Q66JB6 - symbol:bap1 "Ubiquitin carboxyl-termin...   452  2.5e-50   2
ZFIN|ZDB-GENE-050208-492 - symbol:bap1 "BRCA1 associated ...   453  1.5e-49   2
UNIPROTKB|Q5F3N6 - symbol:BAP1 "Ubiquitin carboxyl-termin...   449  2.1e-49   2
UNIPROTKB|C4A0D9 - symbol:BAP1 "Ubiquitin carboxyl-termin...   421  1.5e-47   2
POMBASE|SPBC409.06 - symbol:uch2 "ubiquitin C-terminal hy...   493  4.2e-47   1
UNIPROTKB|E2R9Z2 - symbol:BAP1 "Uncharacterized protein" ...   430  5.5e-47   2
UNIPROTKB|F8W6N3 - symbol:BAP1 "Ubiquitin carboxyl-termin...   423  2.6e-46   2
UNIPROTKB|A2VDM8 - symbol:BAP1 "Ubiquitin carboxyl-termin...   418  3.7e-46   2
UNIPROTKB|F1SAA5 - symbol:UCHL5 "Ubiquitin carboxyl-termi...   480  1.0e-45   1
UNIPROTKB|G3MYU1 - symbol:BAP1 "Ubiquitin carboxyl-termin...   418  3.1e-45   2
UNIPROTKB|A7SU48 - symbol:v1g217532 "Predicted protein" s...   472  7.1e-45   1
UNIPROTKB|Q17N72 - symbol:calypso "Ubiquitin carboxyl-ter...   396  7.6e-44   2
UNIPROTKB|Q52L14 - symbol:bap1 "Ubiquitin carboxyl-termin...   451  1.2e-42   1
WB|WBGene00006724 - symbol:ubh-4 species:6239 "Caenorhabd...   443  8.4e-42   1
ASPGD|ASPL0000055764 - symbol:AN0927 species:162425 "Emer...   430  2.0e-40   1
UNIPROTKB|B3MIV9 - symbol:calypso "Ubiquitin carboxyl-ter...   350  5.7e-38   2
FB|FBgn0262166 - symbol:calypso "calypso" species:7227 "D...   351  1.9e-37   2
UNIPROTKB|B4HST0 - symbol:calypso "Ubiquitin carboxyl-ter...   351  1.9e-37   2
UNIPROTKB|B4P6P6 - symbol:calypso "Ubiquitin carboxyl-ter...   351  1.9e-37   2
UNIPROTKB|B4QHH0 - symbol:calypso "Ubiquitin carboxyl-ter...   351  1.9e-37   2
UNIPROTKB|B3NPV7 - symbol:calypso "Ubiquitin carboxyl-ter...   350  2.4e-37   2
UNIPROTKB|B4GAM2 - symbol:calypso "Ubiquitin carboxyl-ter...   344  6.4e-37   2
UNIPROTKB|Q291J4 - symbol:calypso "Ubiquitin carboxyl-ter...   344  6.4e-37   2
UNIPROTKB|B0W2R4 - symbol:calypso "Ubiquitin carboxyl-ter...   329  1.7e-36   2
UNIPROTKB|H0Y6Y4 - symbol:UCHL5 "Ubiquitin carboxyl-termi...   380  4.0e-35   1
UNIPROTKB|B4DW59 - symbol:UCHL5 "Ubiquitin carboxyl-termi...   350  6.0e-32   1
UNIPROTKB|B7Z9U9 - symbol:UCHL5 "Ubiquitin carboxyl-termi...   349  7.7e-32   1
UNIPROTKB|B4LQ24 - symbol:calypso "Ubiquitin carboxyl-ter...   347  1.3e-31   1
UNIPROTKB|B4JW98 - symbol:calypso "Ubiquitin carboxyl-ter...   343  3.3e-31   1
UNIPROTKB|B4KT51 - symbol:calypso "Ubiquitin carboxyl-ter...   340  6.9e-31   1
UNIPROTKB|C9J7L9 - symbol:BAP1 "Ubiquitin carboxyl-termin...   323  4.4e-29   1
ASPGD|ASPL0000039550 - symbol:AN3453 species:162425 "Emer...   214  2.0e-25   2
UNIPROTKB|H0Y4E0 - symbol:UCHL5 "Ubiquitin carboxyl-termi...   276  4.2e-24   1
UNIPROTKB|H0Y636 - symbol:UCHL5 "Ubiquitin carboxyl-termi...   204  1.8e-16   1
FB|FBgn0010288 - symbol:Uch "Ubiquitin carboxy-terminal h...   190  7.0e-15   1
UNIPROTKB|H0Y4K0 - symbol:UCHL5 "Ubiquitin carboxyl-termi...   183  4.7e-14   1
UNIPROTKB|Q2TBG8 - symbol:UCHL3 "Ubiquitin carboxyl-termi...   182  6.2e-14   1
UNIPROTKB|P15374 - symbol:UCHL3 "Ubiquitin carboxyl-termi...   181  8.0e-14   1
MGI|MGI:1355274 - symbol:Uchl3 "ubiquitin carboxyl-termin...   181  8.0e-14   1
UNIPROTKB|F1RHF0 - symbol:UCHL3 "Ubiquitin carboxyl-termi...   180  1.1e-13   1
RGD|1561196 - symbol:Uchl3 "ubiquitin carboxyl-terminal e...   178  1.8e-13   1
RGD|621131 - symbol:Uchl3-ps1 "ubiquitin carboxyl-termina...   178  1.8e-13   1
ZFIN|ZDB-GENE-030131-3844 - symbol:uchl1 "ubiquitin carbo...   176  3.1e-13   1
UNIPROTKB|F1NY51 - symbol:UCHL3 "Uncharacterized protein"...   173  6.8e-13   1
MGI|MGI:1890440 - symbol:Uchl4 "ubiquitin carboxyl-termin...   173  6.8e-13   1
UNIPROTKB|Q06AB3 - symbol:UCHL3 "Ubiquitin carboxyl-termi...   170  1.5e-12   1
UNIPROTKB|F6XVD7 - symbol:UCHL1 "Uncharacterized protein"...   167  3.3e-12   1
MGI|MGI:103149 - symbol:Uchl1 "ubiquitin carboxy-terminal...   167  3.3e-12   1
RGD|3928 - symbol:Uchl1 "ubiquitin carboxyl-terminal este...   167  3.3e-12   1
UNIPROTKB|F1NIT5 - symbol:UCHL1 "Uncharacterized protein"...   166  4.3e-12   1
UNIPROTKB|L7N069 - symbol:UCHL3 "Uncharacterized protein"...   165  5.6e-12   1
UNIPROTKB|Q6SEG5 - symbol:UCHL1 "Ubiquitin carboxyl-termi...   164  7.2e-12   1
ZFIN|ZDB-GENE-050522-158 - symbol:uchl3 "ubiquitin carbox...   166  1.7e-11   1
DICTYBASE|DDB_G0282007 - symbol:uch1 "ubiquitin C-termina...   169  4.8e-11   1
UNIPROTKB|P09936 - symbol:UCHL1 "Ubiquitin carboxyl-termi...   161  6.3e-11   1
TAIR|locus:2129151 - symbol:UCH3 "ubiquitin C-terminal hy...   164  7.9e-11   1
UNIPROTKB|P23356 - symbol:UCHL1 "Ubiquitin carboxyl-termi...   167  8.2e-11   1
UNIPROTKB|E2QZE3 - symbol:UCHL1 "Uncharacterized protein"...   156  2.2e-09   1
UNIPROTKB|F1PT17 - symbol:UCHL3 "Uncharacterized protein"...    98  1.1e-08   2
UNIPROTKB|Q5TBK7 - symbol:UCHL3 "Ubiquitin carboxyl-termi...    98  1.1e-08   2
CGD|CAL0000563 - symbol:orf19.6272 species:5476 "Candida ...   146  4.6e-08   1
UNIPROTKB|D6R956 - symbol:UCHL1 "Ubiquitin carboxyl-termi...   143  7.8e-08   1
UNIPROTKB|I3L7W1 - symbol:UCHL1 "Ubiquitin carboxyl-termi...   138  2.2e-07   1
ASPGD|ASPL0000069720 - symbol:AN7491 species:162425 "Emer...   125  1.3e-05   1
POMBASE|SPAC27F1.03c - symbol:uch1 "ubiquitin C-terminal ...   122  2.0e-05   1
WB|WBGene00006721 - symbol:ubh-1 species:6239 "Caenorhabd...   114  0.00016   1


>TAIR|locus:2018516 [details] [associations]
            symbol:UCH2 species:3702 "Arabidopsis thaliana"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA;ISS]
            [GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM;IDA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA;ISS] [GO:0008242 "omega peptidase
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0010016 "shoot system morphogenesis" evidence=IGI] [GO:0016579
            "protein deubiquitination" evidence=RCA;IDA] [GO:0048366 "leaf
            development" evidence=IGI] [GO:0048367 "shoot system development"
            evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
            deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
            evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=RCA] InterPro:IPR001578 InterPro:IPR017390 Pfam:PF01088
            PIRSF:PIRSF038120 PRINTS:PR00707 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737 GO:GO:0006511
            GO:GO:0048366 GO:GO:0008242 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589
            HOGENOM:HOG000203918 HSSP:P15374 EMBL:AC001229 GO:GO:0010016
            eggNOG:NOG321645 KO:K05610 OMA:QMFEFDT EMBL:AY065083 EMBL:AY114549
            IPI:IPI00530150 RefSeq:NP_564858.1 UniGene:At.23747 SMR:O04482
            IntAct:O04482 STRING:O04482 MEROPS:C12.A02
            EnsemblPlants:AT1G65650.1 GeneID:842876 KEGG:ath:AT1G65650
            TAIR:At1g65650 InParanoid:O04482 ProtClustDB:CLSN2686150
            Genevestigator:O04482 Uniprot:O04482
        Length = 330

 Score = 1226 (436.6 bits), Expect = 8.9e-125, P = 8.9e-125
 Identities = 241/316 (76%), Positives = 270/316 (85%)

Query:     1 MQVKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVIN 60
             MQVKGVQV              RPVYGLIFLFKW+ GEKD+R  I+D   NLFFA+QVIN
Sbjct:    20 MQVKGVQVEELYSLDSDSLNNLRPVYGLIFLFKWQAGEKDERPTIQDQVSNLFFANQVIN 79

Query:    61 NACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPE 120
             NACATQAIL+ILLN P++DIGPELS LKEFTKNFP +LKGLAINNSD+IRAAHNSFARPE
Sbjct:    80 NACATQAILAILLNSPEVDIGPELSALKEFTKNFPSDLKGLAINNSDSIRAAHNSFARPE 139

Query:   121 PFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQP 180
             PFVPEEQKAA KDDDVYHFISYIPVDGVLYELDGLKEGPISLGPC G Q  ++WLQMVQP
Sbjct:   140 PFVPEEQKAATKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCPGDQTGIEWLQMVQP 199

Query:   181 VIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTS 240
             VIQERIERYS+SEIRFNL+AVIKNRK++YTAELKE QR+RE++LQQ     +   VDK+ 
Sbjct:   200 VIQERIERYSQSEIRFNLLAVIKNRKDIYTAELKELQRQREQLLQQ-----ANTCVDKSE 254

Query:   241 FEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQL 300
              EA+N  ++EV +GIE A++KI+MEEEKF KWRTENIRRKHNYIPFLFNFLK+LAEKKQL
Sbjct:   255 AEAVNALIAEVGSGIEAASDKIVMEEEKFMKWRTENIRRKHNYIPFLFNFLKLLAEKKQL 314

Query:   301 KPLIEKAK-QKTSSSS 315
             KPLIEKAK QKT SS+
Sbjct:   315 KPLIEKAKKQKTESST 330


>TAIR|locus:2171312 [details] [associations]
            symbol:UCH1 species:3702 "Arabidopsis thaliana"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA;ISS]
            [GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM;IDA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA;ISS] [GO:0008242 "omega peptidase
            activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0010016 "shoot system morphogenesis" evidence=IGI] [GO:0048366
            "leaf development" evidence=IGI] [GO:0048367 "shoot system
            development" evidence=IGI] InterPro:IPR001578 InterPro:IPR017390
            Pfam:PF01088 PIRSF:PIRSF038120 PRINTS:PR00707 GO:GO:0005634
            GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB005242
            GO:GO:0006511 GO:GO:0048366 GO:GO:0008242 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 HOGENOM:HOG000203918
            GO:GO:0010016 eggNOG:NOG321645 KO:K05610 ProtClustDB:CLSN2686150
            EMBL:BT005312 EMBL:AK118002 IPI:IPI00517458 RefSeq:NP_197135.1
            UniGene:At.49029 UniGene:At.60876 ProteinModelPortal:Q9FFF2
            SMR:Q9FFF2 IntAct:Q9FFF2 STRING:Q9FFF2 MEROPS:C12.A01 PaxDb:Q9FFF2
            PRIDE:Q9FFF2 EnsemblPlants:AT5G16310.1 GeneID:831492
            KEGG:ath:AT5G16310 TAIR:At5g16310 InParanoid:Q9FFF2 OMA:ERWAFEN
            PhylomeDB:Q9FFF2 Genevestigator:Q9FFF2 Uniprot:Q9FFF2
        Length = 334

 Score = 1116 (397.9 bits), Expect = 4.1e-113, P = 4.1e-113
 Identities = 210/312 (67%), Positives = 260/312 (83%)

Query:     1 MQVKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVIN 60
             MQVKGVQV              RPVYGLI L+KWRP EK++RVVI +PNPN FFASQ+IN
Sbjct:    20 MQVKGVQVEELYSLDFNSLDEIRPVYGLILLYKWRPEEKENRVVITEPNPNFFFASQIIN 79

Query:    61 NACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPE 120
             NACATQAILS+L+N   IDIG ELS+LK+F K FPPELKGLAINN++AIRAAHN+FARP+
Sbjct:    80 NACATQAILSVLMNSSSIDIGSELSELKQFAKEFPPELKGLAINNNEAIRAAHNTFARPD 139

Query:   121 P--FVPEEQKAAGK----DDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDW 174
             P   + +E+ AA K    DDDVYH+ISY+PVDG+LYELDGLKEGPISLG C G    ++W
Sbjct:   140 PSSIMEDEELAAAKNLDEDDDVYHYISYLPVDGILYELDGLKEGPISLGQCLGEPEGIEW 199

Query:   175 LQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSER 234
             L+MVQPV+QE+I+RYS++EIRF+L+AV+KNRKE+Y AELKE+QRKRER+LQQL +LQ+++
Sbjct:   200 LRMVQPVVQEQIDRYSQNEIRFSLLAVVKNRKEMYVAELKEYQRKRERVLQQLGALQADK 259

Query:   235 MVDKTSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKIL 294
               +K+S+EAL++ LSEVN GIE  ++KI+MEEEK K W+ EN+RRKHNY+PFLFNFLKIL
Sbjct:   260 YAEKSSYEALDRELSEVNIGIETVSQKIVMEEEKSKNWKKENMRRKHNYVPFLFNFLKIL 319

Query:   295 AEKKQLKPLIEK 306
             A+KK+LKPLI K
Sbjct:   320 ADKKKLKPLIAK 331


>DICTYBASE|DDB_G0285527 [details] [associations]
            symbol:uch2 "ubiquitin C-terminal hydrolase"
            species:44689 "Dictyostelium discoideum" [GO:0008242 "omega
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0005622
            "intracellular" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
            "proteasome complex" evidence=IEA] InterPro:IPR001578
            InterPro:IPR017390 Pfam:PF01088 PIRSF:PIRSF038120 PRINTS:PR00707
            PROSITE:PS00140 dictyBase:DDB_G0285527 GO:GO:0005634 GO:GO:0005737
            GenomeReviews:CM000153_GR EMBL:AAFI02000079 GO:GO:0008234
            GO:GO:0000502 GO:GO:0006511 GO:GO:0008242 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 HSSP:P15374 MEROPS:C12.005
            eggNOG:NOG321645 KO:K05610 OMA:QMFEFDT RefSeq:XP_638105.1
            ProteinModelPortal:Q54N38 STRING:Q54N38 EnsemblProtists:DDB0233072
            GeneID:8625153 KEGG:ddi:DDB_G0285527 ProtClustDB:CLSZ2430176
            Uniprot:Q54N38
        Length = 343

 Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
 Identities = 152/319 (47%), Positives = 203/319 (63%)

Query:     3 VKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINNA 62
             VK +QV              +PV GLIFLFKW   E+++R  I D N N+FFA+QVI NA
Sbjct:    26 VKDIQVEELYTLDSSEYDRLKPVLGLIFLFKWEK-EEENRT-ISD-NENIFFANQVIQNA 82

Query:    63 CATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPF 122
             CATQAILS+LLN   I++G ELS  K F  +FPP +KG AI NS+ I+  HNSF   +PF
Sbjct:    83 CATQAILSVLLNSEGIELGEELSNFKSFVGDFPPMMKGEAIGNSELIKETHNSFTVQDPF 142

Query:   123 VPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVI 182
             +  ++K   K  D +HFIS+IP  G +YELDGLK+GP  LG CT      +WL++  P I
Sbjct:   143 IFSKKKNR-KPSDAFHFISFIPFQGKVYELDGLKKGPYCLGDCTPD----NWLEIATPFI 197

Query:   183 QERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDK---- 238
             Q+R+E+YS+ EIRFNLMAVIKNR+     ++   ++K+  +  +L+ L S    D     
Sbjct:   198 QKRMEKYSQGEIRFNLMAVIKNRQTTLQEKILTLEKKKNDLEIKLSELNSGSGGDNKEES 257

Query:   239 -----TSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKI 293
                  T+ E LN  ++ VN  IE A  +ILME+EKF+ W+ ENIRRKHN+ P + N +K 
Sbjct:   258 GGATPTTKEDLNFMINVVNNDIEEANNEILMEQEKFRNWKDENIRRKHNFTPLILNLIKG 317

Query:   294 LAEKKQLKPLIEKAKQKTS 312
             LAEK  L+PLI+KAK + S
Sbjct:   318 LAEKDNLQPLIQKAKDQIS 336


>UNIPROTKB|Q5LJA9 [details] [associations]
            symbol:UCHL5 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L5" species:9606 "Homo sapiens" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008242 "omega peptidase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR001578 InterPro:IPR017390 Pfam:PF01088
            PIRSF:PIRSF038120 PRINTS:PR00707 GO:GO:0005634 GO:GO:0005737
            GO:GO:0006511 GO:GO:0008242 GO:GO:0004221 Gene3D:3.40.532.10
            PANTHER:PTHR10589 HOGENOM:HOG000203918 EMBL:AL136370 OMA:QMFEFDT
            HOVERGEN:HBG056021 UniGene:Hs.145469 HGNC:HGNC:19678 ChiTaRS:UCHL5
            IPI:IPI00642374 SMR:Q5LJA9 STRING:Q5LJA9 Ensembl:ENST00000367450
            Uniprot:Q5LJA9
        Length = 368

 Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
 Identities = 151/342 (44%), Positives = 210/342 (61%)

Query:     4 KGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINNA 62
             +G QV              +PV+GLIFLFKW+PGE+    V++D     +FFA QVINNA
Sbjct:    40 RGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNA 99

Query:    63 CATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPE 120
             CATQAI+S+LLNC   D+ +G  LS+ KEF+++F   +KGLA++NSD IR  HNSFAR +
Sbjct:   100 CATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQ 159

Query:   121 PFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQP 180
              F   + K + K++D +HF+SY+PV+G LYELDGL+EGPI LG C       DW+  V+P
Sbjct:   160 MF-EFDTKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD----DWISAVRP 214

Query:   181 VIQERIER---------------------------YSKSEIRFNLMAVIKNRKELYTAEL 213
             VI++RI++                           YS+ EIRFNLMA++ +RK +Y  ++
Sbjct:   215 VIEKRIQKDGFSPCCPGWSQTPELKPSACLDLPKWYSEGEIRFNLMAIVSDRKMIYEQKI 274

Query:   214 KEFQRKRERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKK 271
              E QR       QLA    E  +D    +  N  LS + +  E A  ++L+EEE  K K+
Sbjct:   275 AELQR-------QLAE---EEPMDT---DQGNSMLSAIQS--EVAKNQMLIEEEVQKLKR 319

Query:   272 WRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSS 313
             ++ ENIRRKHNY+PF+   LK LAE +QL PL+EKAK+K ++
Sbjct:   320 YKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNA 361


>UNIPROTKB|Q5LJA5 [details] [associations]
            symbol:UCHL5 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L5" species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0008242 "omega peptidase
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001578
            InterPro:IPR017390 Pfam:PF01088 PIRSF:PIRSF038120 PRINTS:PR00707
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006511 GO:GO:0008242
            GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589
            HOGENOM:HOG000203918 EMBL:AL136370 HOVERGEN:HBG056021
            UniGene:Hs.145469 HGNC:HGNC:19678 ChiTaRS:UCHL5 IPI:IPI00549849
            SMR:Q5LJA5 STRING:Q5LJA5 Ensembl:ENST00000367451 Uniprot:Q5LJA5
        Length = 355

 Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
 Identities = 151/342 (44%), Positives = 210/342 (61%)

Query:     4 KGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINNA 62
             +G QV              +PV+GLIFLFKW+PGE+    V++D     +FFA QVINNA
Sbjct:    28 RGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNA 87

Query:    63 CATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPE 120
             CATQAI+S+LLNC   D+ +G  LS+ KEF+++F   +KGLA++NSD IR  HNSFAR +
Sbjct:    88 CATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQ 147

Query:   121 PFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQP 180
              F   + K + K++D +HF+SY+PV+G LYELDGL+EGPI LG C       DW+  V+P
Sbjct:   148 MF-EFDTKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD----DWISAVRP 202

Query:   181 VIQERIER---------------------------YSKSEIRFNLMAVIKNRKELYTAEL 213
             VI++RI++                           YS+ EIRFNLMA++ +RK +Y  ++
Sbjct:   203 VIEKRIQKDGFSPCCPGWSQTPELKPSACLDLPKWYSEGEIRFNLMAIVSDRKMIYEQKI 262

Query:   214 KEFQRKRERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKK 271
              E QR       QLA    E  +D    +  N  LS + +  E A  ++L+EEE  K K+
Sbjct:   263 AELQR-------QLA----EEPMDT---DQGNSMLSAIQS--EVAKNQMLIEEEVQKLKR 306

Query:   272 WRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSS 313
             ++ ENIRRKHNY+PF+   LK LAE +QL PL+EKAK+K ++
Sbjct:   307 YKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNA 348


>UNIPROTKB|F1P541 [details] [associations]
            symbol:UCHL5 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008242 "omega peptidase activity" evidence=IEA]
            InterPro:IPR001578 InterPro:IPR017390 Pfam:PF01088
            PIRSF:PIRSF038120 PRINTS:PR00707 GO:GO:0005622 GO:GO:0006511
            GO:GO:0008242 GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589
            GeneTree:ENSGT00510000046560 EMBL:AADN02033847 IPI:IPI00585759
            Ensembl:ENSGALT00000003977 ArrayExpress:F1P541 Uniprot:F1P541
        Length = 297

 Score = 489 (177.2 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
 Identities = 101/224 (45%), Positives = 146/224 (65%)

Query:     4 KGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINNA 62
             +G QV              +PV+GLIFLFKW+PGE+    V++D     +FFA QVINNA
Sbjct:    30 RGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNA 89

Query:    63 CATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPE 120
             CATQAI+S+LLNC   DI +G  LS+ KEF+++F   +KGLA++NS+ IR  HNSFAR +
Sbjct:    90 CATQAIVSVLLNCAHQDIRLGETLSEFKEFSQSFDAAMKGLALSNSEVIRQVHNSFARQQ 149

Query:   121 PFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQP 180
              F   + K++ K++D +HF+SY+PV+G LYELDGL+EGPI LG C       DW+  V+P
Sbjct:   150 MF-EFDAKSSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGSCNQD----DWISAVRP 204

Query:   181 VIQERIERYSKSEI--RFNLMAVIKNRKELYTAELKEFQRKRER 222
             VI++RI++    E     N+++ I++    Y   ++E  +K +R
Sbjct:   205 VIEKRIQKNEPMETDQSSNMLSSIQSEVAKYQMLIEEENQKLKR 248

 Score = 166 (63.5 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
 Identities = 35/68 (51%), Positives = 50/68 (73%)

Query:   248 LSEVNAGIEGATEKILMEEE--KFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIE 305
             LS + +  E A  ++L+EEE  K K+++ ENIRRKHNY+PF+   LK LAE +QL PL+E
Sbjct:   225 LSSIQS--EVAKYQMLIEEENQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVE 282

Query:   306 KAKQKTSS 313
             KAK+K ++
Sbjct:   283 KAKEKQNA 290


>FB|FBgn0051639 [details] [associations]
            symbol:CG31639 species:7227 "Drosophila melanogaster"
            [GO:0008150 "biological_process" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0003674 "molecular_function"
            evidence=ND] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0008242 "omega peptidase activity" evidence=IEA]
            InterPro:IPR001578 InterPro:IPR017390 Pfam:PF01088
            PIRSF:PIRSF038120 PRINTS:PR00707 EMBL:AE014296 GO:GO:0022008
            GO:GO:0006508 GO:GO:0004175 GO:GO:0006511 GO:GO:0008242
            GO:GO:0016579 GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589
            GeneTree:ENSGT00510000046560 HSSP:P15374 GO:GO:0005838
            HOGENOM:HOG000266301 eggNOG:NOG321645 KO:K05610 OMA:QMFEFDT
            FlyBase:FBgn0051639 EMBL:AF132567 EMBL:AF145312 EMBL:BT001294
            RefSeq:NP_524003.1 UniGene:Dm.2640 SMR:Q9XZ61 MINT:MINT-1767249
            STRING:Q9XZ61 MEROPS:C12.A05 EnsemblMetazoa:FBtr0076472
            EnsemblMetazoa:FBtr0333867 GeneID:39102 KEGG:dme:Dmel_CG3431
            UCSC:CG3431-RA CTD:39102 FlyBase:FBgn0011327 InParanoid:Q9XZ61
            OrthoDB:EOG45QFVS GenomeRNAi:39102 NextBio:811926 Uniprot:Q9XZ61
        Length = 324

 Score = 496 (179.7 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
 Identities = 100/213 (46%), Positives = 138/213 (64%)

Query:     5 GVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINNACA 64
             G QV               P++GLIFLFKW   ++    V+ D   N+FFA QVINNACA
Sbjct:    29 GAQVEEIWSLDSESFKNLEPIHGLIFLFKWVQEDEPAGKVVLD-RENIFFAKQVINNACA 87

Query:    65 TQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPF 122
             TQAILS+L+N    DI +G  L+  KEF + F P  KGL ++N+  IR  HNSFARP  F
Sbjct:    88 TQAILSLLMNLDHEDIKLGETLTNFKEFCQCFDPYNKGLTLSNASQIRTVHNSFARPTLF 147

Query:   123 VPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVI 182
                + K   KDDDVYHF+ Y+P+ G LYELDGL+EGPI LG     + + +W+ +V+P+I
Sbjct:   148 -ELDTKNQKKDDDVYHFVGYMPIGGRLYELDGLREGPIDLGEI---KSEQNWIDVVRPII 203

Query:   183 QERIERYSKSEIRFNLMAVIKNRKELYTAELKE 215
             ++R++RYS  EI FNLMA+I +R+ +Y  ++++
Sbjct:   204 EKRMQRYSDGEIHFNLMALISDRQRIYEQQIEK 236

 Score = 152 (58.6 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
 Identities = 36/91 (39%), Positives = 54/91 (59%)

Query:   220 RERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRR 279
             R+RI +Q    Q E++++     A++    +  A I      I  E +K K+++ EN+RR
Sbjct:   226 RQRIYEQ----QIEKLLNPAP-NAMDTE-EDRQAEISSLRTYIEYEIQKKKRYKVENVRR 279

Query:   280 KHNYIPFLFNFLKILAEKKQLKPLIEKAKQK 310
             KHNY+PF+   LKIL E  QL P+ EKAKQ+
Sbjct:   280 KHNYLPFIVELLKILGENGQLMPIYEKAKQR 310


>FB|FBgn0011327 [details] [associations]
            symbol:Uch-L5 "Ubiquitin carboxy-terminal hydrolase L5
            ortholog" species:7227 "Drosophila melanogaster" [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0004175 "endopeptidase activity"
            evidence=IDA;NAS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA;NAS;TAS] [GO:0005838 "proteasome regulatory particle"
            evidence=IDA;NAS] [GO:0016579 "protein deubiquitination"
            evidence=ISS;IDA;TAS] [GO:0006508 "proteolysis" evidence=IDA]
            [GO:0008242 "omega peptidase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001578
            InterPro:IPR017390 Pfam:PF01088 PIRSF:PIRSF038120 PRINTS:PR00707
            EMBL:AE014296 GO:GO:0022008 GO:GO:0006508 GO:GO:0004175
            GO:GO:0006511 GO:GO:0008242 GO:GO:0016579 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 GeneTree:ENSGT00510000046560
            HSSP:P15374 GO:GO:0005838 HOGENOM:HOG000266301 eggNOG:NOG321645
            KO:K05610 OMA:QMFEFDT FlyBase:FBgn0051639 EMBL:AF132567
            EMBL:AF145312 EMBL:BT001294 RefSeq:NP_524003.1 UniGene:Dm.2640
            SMR:Q9XZ61 MINT:MINT-1767249 STRING:Q9XZ61 MEROPS:C12.A05
            EnsemblMetazoa:FBtr0076472 EnsemblMetazoa:FBtr0333867 GeneID:39102
            KEGG:dme:Dmel_CG3431 UCSC:CG3431-RA CTD:39102 FlyBase:FBgn0011327
            InParanoid:Q9XZ61 OrthoDB:EOG45QFVS GenomeRNAi:39102 NextBio:811926
            Uniprot:Q9XZ61
        Length = 324

 Score = 496 (179.7 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
 Identities = 100/213 (46%), Positives = 138/213 (64%)

Query:     5 GVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINNACA 64
             G QV               P++GLIFLFKW   ++    V+ D   N+FFA QVINNACA
Sbjct:    29 GAQVEEIWSLDSESFKNLEPIHGLIFLFKWVQEDEPAGKVVLD-RENIFFAKQVINNACA 87

Query:    65 TQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPF 122
             TQAILS+L+N    DI +G  L+  KEF + F P  KGL ++N+  IR  HNSFARP  F
Sbjct:    88 TQAILSLLMNLDHEDIKLGETLTNFKEFCQCFDPYNKGLTLSNASQIRTVHNSFARPTLF 147

Query:   123 VPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVI 182
                + K   KDDDVYHF+ Y+P+ G LYELDGL+EGPI LG     + + +W+ +V+P+I
Sbjct:   148 -ELDTKNQKKDDDVYHFVGYMPIGGRLYELDGLREGPIDLGEI---KSEQNWIDVVRPII 203

Query:   183 QERIERYSKSEIRFNLMAVIKNRKELYTAELKE 215
             ++R++RYS  EI FNLMA+I +R+ +Y  ++++
Sbjct:   204 EKRMQRYSDGEIHFNLMALISDRQRIYEQQIEK 236

 Score = 152 (58.6 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
 Identities = 36/91 (39%), Positives = 54/91 (59%)

Query:   220 RERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRR 279
             R+RI +Q    Q E++++     A++    +  A I      I  E +K K+++ EN+RR
Sbjct:   226 RQRIYEQ----QIEKLLNPAP-NAMDTE-EDRQAEISSLRTYIEYEIQKKKRYKVENVRR 279

Query:   280 KHNYIPFLFNFLKILAEKKQLKPLIEKAKQK 310
             KHNY+PF+   LKIL E  QL P+ EKAKQ+
Sbjct:   280 KHNYLPFIVELLKILGENGQLMPIYEKAKQR 310


>UNIPROTKB|Q9XSJ0 [details] [associations]
            symbol:UCHL5 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L5" species:9913 "Bos taurus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IDA] [GO:0070628 "proteasome binding"
            evidence=IDA] [GO:0031011 "Ino80 complex" evidence=ISS] [GO:0005829
            "cytosol" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0061136
            "regulation of proteasomal protein catabolic process" evidence=IEA]
            [GO:0048853 "forebrain morphogenesis" evidence=IEA] [GO:0030901
            "midbrain development" evidence=IEA] [GO:0021670 "lateral ventricle
            development" evidence=IEA] [GO:0004866 "endopeptidase inhibitor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006310 "DNA recombination"
            evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0000502
            "proteasome complex" evidence=IEA] [GO:0008242 "omega peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001578
            InterPro:IPR017390 Pfam:PF01088 PIRSF:PIRSF038120 PRINTS:PR00707
            PROSITE:PS00140 GO:GO:0005829 GO:GO:0005634 GO:GO:0006355
            GO:GO:0006281 GO:GO:0004866 GO:GO:0006351 GO:GO:0031011
            GO:GO:0006310 GO:GO:0030901 GO:GO:0000502 GO:GO:0070628
            GO:GO:0006511 GO:GO:0021670 GO:GO:0008242 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589
            GeneTree:ENSGT00510000046560 GO:GO:0061136 HOGENOM:HOG000203918
            GO:GO:0048853 MEROPS:C12.005 eggNOG:NOG321645 KO:K05610 OMA:QMFEFDT
            BRENDA:3.4.19.12 EMBL:AF148446 EMBL:BC105166 IPI:IPI00694182
            RefSeq:NP_776906.2 UniGene:Bt.4689 ProteinModelPortal:Q9XSJ0
            STRING:Q9XSJ0 PRIDE:Q9XSJ0 Ensembl:ENSBTAT00000018104 GeneID:282110
            KEGG:bta:282110 CTD:51377 HOVERGEN:HBG056021 InParanoid:Q9XSJ0
            OrthoDB:EOG4RBQK0 NextBio:20805949 Uniprot:Q9XSJ0
        Length = 328

 Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
 Identities = 118/251 (47%), Positives = 165/251 (65%)

Query:     4 KGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINNA 62
             +G QV              +PV+GLIFLFKW+PGE+    V++D     +FFA QVINNA
Sbjct:    28 RGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNA 87

Query:    63 CATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPE 120
             CATQAI+S+LLNC   D+ +G  LS+ KEF+++F   +KGLA++NSD IR  HNSFAR +
Sbjct:    88 CATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQ 147

Query:   121 PFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQP 180
              F   + K A K++D +HF+SY+PV+G LYELDGL+EGPI LG C       DW+  V+P
Sbjct:   148 MF-EFDAKTAAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD----DWISAVRP 202

Query:   181 VIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTS 240
             VI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR+     + + + Q   M+    
Sbjct:   203 VIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQLAE--EPMDTDQGSNMLSAIQ 260

Query:   241 FE-ALNKSLSE 250
              E A N+ L E
Sbjct:   261 SEVAKNQMLIE 271

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 68/154 (44%), Positives = 95/154 (61%)

Query:   163 GPCT-GGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRE 221
             GP   G     DW+  V+PVI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR   
Sbjct:   184 GPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR--- 240

Query:   222 RILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRR 279
                 QLA    E M        L+   SEV      A  ++L+EEE  K K+++ ENIRR
Sbjct:   241 ----QLAE---EPMDTDQGSNMLSAIQSEV------AKNQMLIEEEVQKLKRYKIENIRR 287

Query:   280 KHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSS 313
             KHNY+PF+   LK LAE +QL PL+EKAK+K ++
Sbjct:   288 KHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNA 321


>UNIPROTKB|E2QWM9 [details] [associations]
            symbol:UCHL5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0070628 "proteasome binding" evidence=IEA]
            [GO:0061136 "regulation of proteasomal protein catabolic process"
            evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
            [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030901 "midbrain
            development" evidence=IEA] [GO:0021670 "lateral ventricle
            development" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004866
            "endopeptidase inhibitor activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0008242
            "omega peptidase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            InterPro:IPR001578 InterPro:IPR017390 Pfam:PF01088
            PIRSF:PIRSF038120 PRINTS:PR00707 GO:GO:0005829 GO:GO:0004866
            GO:GO:0031011 GO:GO:0030901 GO:GO:0006511 GO:GO:0021670
            GO:GO:0008242 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 GeneTree:ENSGT00510000046560
            GO:GO:0061136 GO:GO:0048853 KO:K05610 OMA:QMFEFDT CTD:51377
            EMBL:AAEX03018288 EMBL:AAEX03018289 RefSeq:XP_536116.2
            ProteinModelPortal:E2QWM9 Ensembl:ENSCAFT00000016817 GeneID:478958
            KEGG:cfa:478958 NextBio:20854216 Uniprot:E2QWM9
        Length = 329

 Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
 Identities = 117/251 (46%), Positives = 165/251 (65%)

Query:     4 KGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINNA 62
             +G QV              +PV+GLIFLFKW+PGE+    V++D     +FFA QVINNA
Sbjct:    28 RGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNA 87

Query:    63 CATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPE 120
             CATQAI+S+LLNC   D+ +G  LS+ KEF+++F   +KGLA++NSD IR  HNSFAR +
Sbjct:    88 CATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQ 147

Query:   121 PFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQP 180
              F   + K + K++D +HF+SY+PV+G LYELDGL+EGPI LG C       DW+  V+P
Sbjct:   148 MF-EFDAKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD----DWISAVRP 202

Query:   181 VIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTS 240
             VI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR+     + + + Q   M+    
Sbjct:   203 VIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQLAEE-EPMDTDQGNNMLSAIQ 261

Query:   241 FE-ALNKSLSE 250
              E A N+ L E
Sbjct:   262 SEVAKNQMLIE 272

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 68/154 (44%), Positives = 98/154 (63%)

Query:   163 GPCT-GGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRE 221
             GP   G     DW+  V+PVI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR   
Sbjct:   184 GPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR--- 240

Query:   222 RILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRR 279
                 QLA    E  +D    +  N  LS + +  E A  ++L+EEE  K K+++ ENIRR
Sbjct:   241 ----QLAE---EEPMDT---DQGNNMLSAIQS--EVAKNQMLIEEEVQKLKRYKIENIRR 288

Query:   280 KHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSS 313
             KHNY+PF+   LK LAE +QL PL+EKAK+K ++
Sbjct:   289 KHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNA 322


>UNIPROTKB|F1SAA9 [details] [associations]
            symbol:LOC100511033 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0008242 "omega peptidase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] InterPro:IPR001578
            InterPro:IPR017390 Pfam:PF01088 PIRSF:PIRSF038120 PRINTS:PR00707
            GO:GO:0005622 GO:GO:0006511 GO:GO:0008242 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 GeneTree:ENSGT00510000046560
            OMA:QMFEFDT EMBL:CU896682 Ensembl:ENSSSCT00000011818
            ArrayExpress:F1SAA9 Uniprot:F1SAA9
        Length = 313

 Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
 Identities = 117/251 (46%), Positives = 165/251 (65%)

Query:     4 KGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINNA 62
             +G QV              +PV+GLIFLFKW+PGE+    V++D     +FFA QVINNA
Sbjct:    12 RGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNA 71

Query:    63 CATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPE 120
             CATQAI+S+LLNC   D+ +G  LS+ KEF+++F   +KGLA++NSD IR  HNSFAR +
Sbjct:    72 CATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQ 131

Query:   121 PFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQP 180
              F   + K + K++D +HF+SY+PV+G LYELDGL+EGPI LG C       DW+  V+P
Sbjct:   132 MF-EFDAKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD----DWISAVRP 186

Query:   181 VIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTS 240
             VI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR+     + + + Q   M+    
Sbjct:   187 VIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQLAEE-EPMDTDQGSNMLSAIQ 245

Query:   241 FE-ALNKSLSE 250
              E A N+ L E
Sbjct:   246 SEVAKNQMLIE 256

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 68/154 (44%), Positives = 96/154 (62%)

Query:   163 GPCT-GGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRE 221
             GP   G     DW+  V+PVI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR   
Sbjct:   168 GPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR--- 224

Query:   222 RILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRR 279
                 QLA  + E M        L+   SEV      A  ++L+EEE  K K+++ ENIRR
Sbjct:   225 ----QLA--EEEPMDTDQGSNMLSAIQSEV------AKNQMLIEEEVQKLKRYKIENIRR 272

Query:   280 KHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSS 313
             KHNY+PF+   LK LAE +QL PL+EKAK+K ++
Sbjct:   273 KHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNA 306


>UNIPROTKB|Q06AT3 [details] [associations]
            symbol:UCHL5 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L5" species:9823 "Sus scrofa" [GO:0005829 "cytosol" evidence=ISS]
            [GO:0031011 "Ino80 complex" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0000502 "proteasome
            complex" evidence=IEA] [GO:0008242 "omega peptidase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001578 InterPro:IPR017390
            Pfam:PF01088 PIRSF:PIRSF038120 PRINTS:PR00707 GO:GO:0005829
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006281 GO:GO:0006351
            GO:GO:0006310 GO:GO:0000502 GO:GO:0006511 GO:GO:0008242
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 Gene3D:3.40.532.10
            PANTHER:PTHR10589 HOGENOM:HOG000203918 MEROPS:C12.005
            eggNOG:NOG321645 KO:K05610 CTD:51377 HOVERGEN:HBG056021
            OrthoDB:EOG4RBQK0 EMBL:DQ917642 RefSeq:NP_001116682.1
            UniGene:Ssc.8201 ProteinModelPortal:Q06AT3 STRING:Q06AT3
            GeneID:100144472 KEGG:ssc:100144472 Uniprot:Q06AT3
        Length = 329

 Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
 Identities = 117/251 (46%), Positives = 165/251 (65%)

Query:     4 KGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINNA 62
             +G QV              +PV+GLIFLFKW+PGE+    V++D     +FFA QVINNA
Sbjct:    28 RGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNA 87

Query:    63 CATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPE 120
             CATQAI+S+LLNC   D+ +G  LS+ KEF+++F   +KGLA++NSD IR  HNSFAR +
Sbjct:    88 CATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQ 147

Query:   121 PFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQP 180
              F   + K + K++D +HF+SY+PV+G LYELDGL+EGPI LG C       DW+  V+P
Sbjct:   148 MF-EFDAKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD----DWISAVRP 202

Query:   181 VIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTS 240
             VI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR+     + + + Q   M+    
Sbjct:   203 VIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQLAEE-EPMDTDQGSNMLSAIQ 261

Query:   241 FE-ALNKSLSE 250
              E A N+ L E
Sbjct:   262 SEVAKNQMLIE 272

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 68/154 (44%), Positives = 96/154 (62%)

Query:   163 GPCT-GGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRE 221
             GP   G     DW+  V+PVI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR   
Sbjct:   184 GPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR--- 240

Query:   222 RILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRR 279
                 QLA  + E M        L+   SEV      A  ++L+EEE  K K+++ ENIRR
Sbjct:   241 ----QLA--EEEPMDTDQGSNMLSAIQSEV------AKNQMLIEEEVQKLKRYKIENIRR 288

Query:   280 KHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSS 313
             KHNY+PF+   LK LAE +QL PL+EKAK+K ++
Sbjct:   289 KHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNA 322


>UNIPROTKB|Q9Y5K5 [details] [associations]
            symbol:UCHL5 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L5" species:9606 "Homo sapiens" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008242 "omega peptidase activity" evidence=IEA] [GO:0000502
            "proteasome complex" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0021670 "lateral ventricle development"
            evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
            [GO:0048853 "forebrain morphogenesis" evidence=IEA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0070628 "proteasome binding"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
            "cytosol" evidence=IDA] [GO:0031011 "Ino80 complex" evidence=IDA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IDA]
            [GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0004866
            "endopeptidase inhibitor activity" evidence=IMP] [GO:0061136
            "regulation of proteasomal protein catabolic process" evidence=IMP]
            [GO:0007179 "transforming growth factor beta receptor signaling
            pathway" evidence=TAS] [GO:0030512 "negative regulation of
            transforming growth factor beta receptor signaling pathway"
            evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010951
            "negative regulation of endopeptidase activity" evidence=IMP]
            InterPro:IPR001578 InterPro:IPR017390 Pfam:PF01088
            PIRSF:PIRSF038120 PRINTS:PR00707 PROSITE:PS00140 GO:GO:0005829
            Reactome:REACT_111102 GO:GO:0006355 GO:GO:0006281 GO:GO:0004866
            GO:GO:0006351 GO:GO:0031011 GO:GO:0006310 GO:GO:0030901
            GO:GO:0007179 GO:GO:0000502 GO:GO:0070628 GO:GO:0006511
            GO:GO:0021670 GO:GO:0030512 GO:GO:0008242 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589
            GO:GO:0061136 GO:GO:0048853 EMBL:AL136370 MEROPS:C12.005
            eggNOG:NOG321645 KO:K05610 BRENDA:3.4.19.12 CTD:51377
            HOVERGEN:HBG056021 OrthoDB:EOG4RBQK0 EMBL:AF147717 EMBL:AF151828
            EMBL:AF157320 EMBL:BT006790 EMBL:BC015521 EMBL:BC025369
            IPI:IPI00219512 IPI:IPI00219513 IPI:IPI00299313 IPI:IPI00549820
            RefSeq:NP_001186190.1 RefSeq:NP_001186191.1 RefSeq:NP_001186192.1
            RefSeq:NP_057068.1 UniGene:Hs.145469 PDB:3A7S PDB:3IHR PDB:3RII
            PDB:3RIS PDB:3TB3 PDBsum:3A7S PDBsum:3IHR PDBsum:3RII PDBsum:3RIS
            PDBsum:3TB3 ProteinModelPortal:Q9Y5K5 SMR:Q9Y5K5 DIP:DIP-42671N
            IntAct:Q9Y5K5 MINT:MINT-2823912 STRING:Q9Y5K5 PhosphoSite:Q9Y5K5
            DMDM:108936023 PaxDb:Q9Y5K5 PRIDE:Q9Y5K5 DNASU:51377
            Ensembl:ENST00000367448 Ensembl:ENST00000367449
            Ensembl:ENST00000367454 Ensembl:ENST00000367455 GeneID:51377
            KEGG:hsa:51377 UCSC:uc001gsm.3 UCSC:uc001gso.3 UCSC:uc001gsp.3
            UCSC:uc001gsq.3 GeneCards:GC01M192984 HGNC:HGNC:19678 HPA:HPA005908
            MIM:610667 neXtProt:NX_Q9Y5K5 PharmGKB:PA134916228 PhylomeDB:Q9Y5K5
            ChiTaRS:UCHL5 EvolutionaryTrace:Q9Y5K5 GenomeRNAi:51377
            NextBio:54875 ArrayExpress:Q9Y5K5 Bgee:Q9Y5K5 CleanEx:HS_UCHL5
            Genevestigator:Q9Y5K5 GermOnline:ENSG00000116750 Uniprot:Q9Y5K5
        Length = 329

 Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
 Identities = 110/219 (50%), Positives = 153/219 (69%)

Query:     4 KGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINNA 62
             +G QV              +PV+GLIFLFKW+PGE+    V++D     +FFA QVINNA
Sbjct:    28 RGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNA 87

Query:    63 CATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPE 120
             CATQAI+S+LLNC   D+ +G  LS+ KEF+++F   +KGLA++NSD IR  HNSFAR +
Sbjct:    88 CATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQ 147

Query:   121 PFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQP 180
              F   + K + K++D +HF+SY+PV+G LYELDGL+EGPI LG C       DW+  V+P
Sbjct:   148 MF-EFDTKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD----DWISAVRP 202

Query:   181 VIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRK 219
             VI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR+
Sbjct:   203 VIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQ 241

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 68/154 (44%), Positives = 98/154 (63%)

Query:   163 GPCT-GGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRE 221
             GP   G     DW+  V+PVI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR   
Sbjct:   184 GPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR--- 240

Query:   222 RILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRR 279
                 QLA    E  +D    +  N  LS + +  E A  ++L+EEE  K K+++ ENIRR
Sbjct:   241 ----QLAE---EEPMDT---DQGNSMLSAIQS--EVAKNQMLIEEEVQKLKRYKIENIRR 288

Query:   280 KHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSS 313
             KHNY+PF+   LK LAE +QL PL+EKAK+K ++
Sbjct:   289 KHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNA 322


>UNIPROTKB|Q5LJB0 [details] [associations]
            symbol:UCHL5 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L5" species:9606 "Homo sapiens" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006511 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 HOGENOM:HOG000203918
            EMBL:AL136370 HOVERGEN:HBG056021 UniGene:Hs.145469 HGNC:HGNC:19678
            ChiTaRS:UCHL5 IPI:IPI01013523 SMR:Q5LJB0 STRING:Q5LJB0
            Ensembl:ENST00000421683 Uniprot:Q5LJB0
        Length = 258

 Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
 Identities = 110/219 (50%), Positives = 153/219 (69%)

Query:     4 KGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINNA 62
             +G QV              +PV+GLIFLFKW+PGE+    V++D     +FFA QVINNA
Sbjct:    19 RGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNA 78

Query:    63 CATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPE 120
             CATQAI+S+LLNC   D+ +G  LS+ KEF+++F   +KGLA++NSD IR  HNSFAR +
Sbjct:    79 CATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQ 138

Query:   121 PFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQP 180
              F   + K + K++D +HF+SY+PV+G LYELDGL+EGPI LG C       DW+  V+P
Sbjct:   139 MF-EFDTKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD----DWISAVRP 193

Query:   181 VIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRK 219
             VI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR+
Sbjct:   194 VIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQ 232


>RGD|1305414 [details] [associations]
            symbol:Uchl5 "ubiquitin carboxyl-terminal hydrolase L5"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA;ISO]
            [GO:0004866 "endopeptidase inhibitor activity" evidence=IEA;ISO]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
            evidence=ISO] [GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008242 "omega peptidase activity" evidence=IEA] [GO:0010951
            "negative regulation of endopeptidase activity" evidence=ISO]
            [GO:0016579 "protein deubiquitination" evidence=IEA;ISO]
            [GO:0021670 "lateral ventricle development" evidence=IEA;ISO]
            [GO:0030901 "midbrain development" evidence=IEA;ISO] [GO:0031011
            "Ino80 complex" evidence=IEA;ISO] [GO:0048853 "forebrain
            morphogenesis" evidence=IEA;ISO] [GO:0061136 "regulation of
            proteasomal protein catabolic process" evidence=IEA;ISO]
            [GO:0070628 "proteasome binding" evidence=IEA;ISO]
            InterPro:IPR001578 InterPro:IPR017390 Pfam:PF01088
            PIRSF:PIRSF038120 PRINTS:PR00707 RGD:1305414 GO:GO:0005622
            GO:GO:0006511 GO:GO:0008242 GO:GO:0004221 Gene3D:3.40.532.10
            PANTHER:PTHR10589 GeneTree:ENSGT00510000046560 HOGENOM:HOG000203918
            MEROPS:C12.005 eggNOG:NOG321645 KO:K05610 CTD:51377
            HOVERGEN:HBG056021 OrthoDB:EOG4RBQK0 EMBL:BC088841 IPI:IPI00734588
            RefSeq:NP_001012149.1 UniGene:Rn.40424 STRING:Q5HZY3
            Ensembl:ENSRNOT00000004881 GeneID:360853 KEGG:rno:360853
            UCSC:RGD:1305414 NextBio:674376 Genevestigator:Q5HZY3
            Uniprot:Q5HZY3
        Length = 324

 Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
 Identities = 110/219 (50%), Positives = 153/219 (69%)

Query:     4 KGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINNA 62
             +G QV              +PV+GLIFLFKW+PGE+    V++D     +FFA QVINNA
Sbjct:    28 RGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLETIFFAKQVINNA 87

Query:    63 CATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPE 120
             CATQAI+S+LLNC   D+ +G  LS+ KEF+++F   +KGLA++NSD IR  HNSFAR +
Sbjct:    88 CATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQ 147

Query:   121 PFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQP 180
              F   + K + K++D +HF+SY+PV+G LYELDGL+EGPI LG C       DW+  V+P
Sbjct:   148 MF-EFDTKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD----DWITAVRP 202

Query:   181 VIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRK 219
             VI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR+
Sbjct:   203 VIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQ 241

 Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 65/147 (44%), Positives = 90/147 (61%)

Query:   163 GPCT-GGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRE 221
             GP   G     DW+  V+PVI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR   
Sbjct:   184 GPIDLGACNQDDWITAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR--- 240

Query:   222 RILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRR 279
                 QLA  + E M        L+   SEV      A  ++L+EEE  K K+++ ENIRR
Sbjct:   241 ----QLA--EEEPMDTDQGSTVLSAIQSEV------ARNQMLIEEEVQKLKRYKIENIRR 288

Query:   280 KHNYIPFLFNFLKILAEKKQLKPLIEK 306
             KHNY+PF+   LK LAE +QL PL+EK
Sbjct:   289 KHNYLPFIMELLKTLAEHQQLIPLVEK 315


>UNIPROTKB|E1BU61 [details] [associations]
            symbol:UCHL5 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008242 "omega peptidase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA] [GO:0004866 "endopeptidase inhibitor activity"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=IEA] [GO:0021670 "lateral
            ventricle development" evidence=IEA] [GO:0030901 "midbrain
            development" evidence=IEA] [GO:0031011 "Ino80 complex"
            evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
            [GO:0061136 "regulation of proteasomal protein catabolic process"
            evidence=IEA] [GO:0070628 "proteasome binding" evidence=IEA]
            InterPro:IPR001578 InterPro:IPR017390 Pfam:PF01088
            PIRSF:PIRSF038120 PRINTS:PR00707 GO:GO:0005829 GO:GO:0004866
            GO:GO:0031011 GO:GO:0006511 GO:GO:0008242 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589
            GeneTree:ENSGT00510000046560 GO:GO:0061136 OMA:QMFEFDT
            EMBL:AADN02033847 IPI:IPI00683011 PRIDE:E1BU61
            Ensembl:ENSGALT00000034039 ArrayExpress:E1BU61 Uniprot:E1BU61
        Length = 331

 Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
 Identities = 119/256 (46%), Positives = 168/256 (65%)

Query:     4 KGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINNA 62
             +G QV              +PV+GLIFLFKW+PGE+    V++D     +FFA QVINNA
Sbjct:    30 RGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNA 89

Query:    63 CATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPE 120
             CATQAI+S+LLNC   DI +G  LS+ KEF+++F   +KGLA++NS+ IR  HNSFAR +
Sbjct:    90 CATQAIVSVLLNCAHQDIRLGETLSEFKEFSQSFDAAMKGLALSNSEVIRQVHNSFARQQ 149

Query:   121 PFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQP 180
              F   + K++ K++D +HF+SY+PV+G LYELDGL+EGPI LG C       DW+  V+P
Sbjct:   150 MF-EFDAKSSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGSCNQD----DWISAVRP 204

Query:   181 VIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRK--RERILQ------QLASLQS 232
             VI++RI++YS+ EIRFNLMA++ +RK +Y   + E QR+   E  ++       L+S+QS
Sbjct:   205 VIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQRIAELQRQLAEEEPMETDQSSNMLSSIQS 264

Query:   233 ERMVDKTSFEALNKSL 248
             E    +   E  N+ L
Sbjct:   265 EVAKYQMLIEEENQKL 280

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 69/154 (44%), Positives = 97/154 (62%)

Query:   163 GPCTGGQGDMD-WLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRE 221
             GP   G  + D W+  V+PVI++RI++YS+ EIRFNLMA++ +RK +Y   + E QR   
Sbjct:   186 GPIDLGSCNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQRIAELQR--- 242

Query:   222 RILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRR 279
                 QLA  + E M    S   L+   SEV      A  ++L+EEE  K K+++ ENIRR
Sbjct:   243 ----QLA--EEEPMETDQSSNMLSSIQSEV------AKYQMLIEEENQKLKRYKIENIRR 290

Query:   280 KHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSS 313
             KHNY+PF+   LK LAE +QL PL+EKAK+K ++
Sbjct:   291 KHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNA 324


>MGI|MGI:1914848 [details] [associations]
            symbol:Uchl5 "ubiquitin carboxyl-terminal esterase L5"
            species:10090 "Mus musculus" [GO:0000502 "proteasome complex"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0004866 "endopeptidase inhibitor activity"
            evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005829 "cytosol" evidence=ISO] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0008242 "omega
            peptidase activity" evidence=IEA] [GO:0010951 "negative regulation
            of endopeptidase activity" evidence=ISO] [GO:0016579 "protein
            deubiquitination" evidence=ISO] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0021670 "lateral ventricle development"
            evidence=IMP] [GO:0030901 "midbrain development" evidence=IMP]
            [GO:0031011 "Ino80 complex" evidence=ISO] [GO:0048853 "forebrain
            morphogenesis" evidence=IMP] [GO:0061136 "regulation of proteasomal
            protein catabolic process" evidence=ISO] [GO:0070628 "proteasome
            binding" evidence=ISO] InterPro:IPR001578 InterPro:IPR017390
            Pfam:PF01088 PIRSF:PIRSF038120 PRINTS:PR00707 PROSITE:PS00140
            MGI:MGI:1914848 GO:GO:0005829 GO:GO:0005634 GO:GO:0006355
            GO:GO:0006281 GO:GO:0004866 GO:GO:0006351 GO:GO:0031011
            GO:GO:0006310 GO:GO:0030901 GO:GO:0000502 GO:GO:0006511
            GO:GO:0021670 GO:GO:0008242 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589
            GeneTree:ENSGT00510000046560 GO:GO:0061136 HOGENOM:HOG000203918
            GO:GO:0048853 MEROPS:C12.005 eggNOG:NOG321645 KO:K05610 OMA:QMFEFDT
            CTD:51377 HOVERGEN:HBG056021 OrthoDB:EOG4RBQK0 ChiTaRS:UCHL5
            EMBL:AF148447 EMBL:AF175903 EMBL:AK017925 EMBL:AK011117
            EMBL:AK007860 EMBL:BC006891 IPI:IPI00124938 IPI:IPI00230763
            RefSeq:NP_001153338.1 RefSeq:NP_062508.2 UniGene:Mm.261004
            ProteinModelPortal:Q9WUP7 SMR:Q9WUP7 STRING:Q9WUP7
            PhosphoSite:Q9WUP7 REPRODUCTION-2DPAGE:Q9WUP7 PaxDb:Q9WUP7
            PRIDE:Q9WUP7 Ensembl:ENSMUST00000018333 GeneID:56207 KEGG:mmu:56207
            UCSC:uc007cxe.2 UCSC:uc007cxf.2 InParanoid:Q9WUP7 NextBio:312039
            Bgee:Q9WUP7 CleanEx:MM_UCHL5 Genevestigator:Q9WUP7
            GermOnline:ENSMUSG00000018189 Uniprot:Q9WUP7
        Length = 329

 Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
 Identities = 110/219 (50%), Positives = 152/219 (69%)

Query:     4 KGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINNA 62
             +G QV              +PV+GLIFLFKW+PGE+    V++D     +FFA QVINNA
Sbjct:    28 RGAQVEEIWSLEPESFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLETIFFAKQVINNA 87

Query:    63 CATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPE 120
             CATQAI+S+LLNC   D+ +G  LS+ KEF+++F   +KGLA++NSD IR  HNSFAR +
Sbjct:    88 CATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQ 147

Query:   121 PFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQP 180
              F   + K   K++D +HF+SY+PV+G LYELDGL+EGPI LG C       DW+  V+P
Sbjct:   148 MF-EFDTKTPAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD----DWITAVRP 202

Query:   181 VIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRK 219
             VI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR+
Sbjct:   203 VIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQ 241

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 68/154 (44%), Positives = 96/154 (62%)

Query:   163 GPCT-GGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRE 221
             GP   G     DW+  V+PVI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR   
Sbjct:   184 GPIDLGACNQDDWITAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR--- 240

Query:   222 RILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRR 279
                 QLA  + E M        L+   SEV      A  ++L+EEE  K K+++ ENIRR
Sbjct:   241 ----QLA--EEEPMDTDQGSTVLSAIQSEV------ARNQMLIEEEVQKLKRYKIENIRR 288

Query:   280 KHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSS 313
             KHNY+PF+   LK LAE +QL PL+EKAK+K ++
Sbjct:   289 KHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNA 322


>ZFIN|ZDB-GENE-040426-2051 [details] [associations]
            symbol:uchl5 "ubiquitin carboxyl-terminal
            hydrolase L5" species:7955 "Danio rerio" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0008242 "omega peptidase
            activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR001578 InterPro:IPR017390 Pfam:PF01088
            PIRSF:PIRSF038120 PRINTS:PR00707 ZFIN:ZDB-GENE-040426-2051
            GO:GO:0005622 GO:GO:0006511 GO:GO:0008242 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 HOGENOM:HOG000203918
            MEROPS:C12.005 eggNOG:NOG321645 KO:K05610 CTD:51377
            HOVERGEN:HBG056021 OrthoDB:EOG4RBQK0 EMBL:BC067545 IPI:IPI00502058
            RefSeq:NP_998249.1 UniGene:Dr.80820 ProteinModelPortal:Q6NWL6
            STRING:Q6NWL6 PRIDE:Q6NWL6 GeneID:406357 KEGG:dre:406357
            NextBio:20817974 ArrayExpress:Q6NWL6 Bgee:Q6NWL6 Uniprot:Q6NWL6
        Length = 329

 Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
 Identities = 107/217 (49%), Positives = 150/217 (69%)

Query:     4 KGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINNA 62
             KG QV              +PV+GLIFLFKW+PGE+    +++D     +FFA QVINNA
Sbjct:    28 KGAQVEEIWSMEPENFENLKPVHGLIFLFKWQPGEEPAGSIVQDSRLDQIFFAKQVINNA 87

Query:    63 CATQAILSILLNC--PDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPE 120
             CATQAI+S+LLNC  PD+ +G  L++ KEF+ +F   +KGLA++NS+ IR  HN FAR +
Sbjct:    88 CATQAIISVLLNCTHPDMLLGETLTEFKEFSNSFDAAMKGLALSNSEVIRQVHNGFARQQ 147

Query:   121 PFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQP 180
              F   + K+  K++D +HF+SY+PV+G LYELDGL+EGPI LG C       DW+  V+P
Sbjct:   148 MF-EFDAKSTAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGVCNQD----DWISAVRP 202

Query:   181 VIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQ 217
             VI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E Q
Sbjct:   203 VIEKRIQKYSEGEIRFNLMAIVSDRKMIYEKKIVELQ 239

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 63/143 (44%), Positives = 92/143 (64%)

Query:   173 DWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQS 232
             DW+  V+PVI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E Q          A L  
Sbjct:   195 DWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEKKIVELQ----------AQLTE 244

Query:   233 ERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRRKHNYIPFLFNF 290
             E  +D    +     LS + + I  A  ++L+EEE  K K+++ ENIRRKHNY+PF+   
Sbjct:   245 EEPMDT---DQSGNHLSSIQSEI--AKYQLLIEEENQKLKRYKVENIRRKHNYLPFIMEL 299

Query:   291 LKILAEKKQLKPLIEKAKQKTSS 313
             LK LAE +QL PL+EKAK+K S+
Sbjct:   300 LKTLAEYQQLIPLVEKAKEKQSA 322


>FB|FBgn0030370 [details] [associations]
            symbol:Uch-L5R "Uch-L5-related" species:7227 "Drosophila
            melanogaster" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS;NAS] [GO:0008242 "omega peptidase activity"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=ISS] [GO:0005838 "proteasome regulatory particle"
            evidence=ISS] InterPro:IPR001578 InterPro:IPR017390 Pfam:PF01088
            PIRSF:PIRSF038120 PRINTS:PR00707 GO:GO:0005622 GO:GO:0006511
            GO:GO:0008242 GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589
            EMBL:AY089303 ProteinModelPortal:Q8T487 SMR:Q8T487 STRING:Q8T487
            MEROPS:C12.A04 PRIDE:Q8T487 FlyBase:FBgn0030370 InParanoid:Q8T487
            OrthoDB:EOG4G4F66 ArrayExpress:Q8T487 Bgee:Q8T487 Uniprot:Q8T487
        Length = 340

 Score = 435 (158.2 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
 Identities = 90/193 (46%), Positives = 124/193 (64%)

Query:    24 PVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINNACATQAILSILLNCP--DIDIG 81
             P++GLIFLFKW   +   RVV      ++FFA QVI NACATQA+L +LLN    DID+G
Sbjct:    65 PIHGLIFLFKWLDDKPAGRVVTD--RSDIFFARQVIPNACATQALLCLLLNLEHEDIDLG 122

Query:    82 PELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFIS 141
               L+ L+   ++  PE +G  + N + IR  HNSFARPE FV EE      +DD YHF+ 
Sbjct:   123 QTLTDLRNLCQDLDPECRGHRLANEEKIRKVHNSFARPELFVVEESTDF-IEDDCYHFVG 181

Query:   142 YIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAV 201
             ++P+ G L+ELDG+ EGPI L      Q   +WL +V+P+I  R+ERYS  EI FNLMA+
Sbjct:   182 FMPIKGKLFELDGMHEGPIELADIDQQQ---NWLDVVRPIIAARMERYSVGEIHFNLMAL 238

Query:   202 IKNRKELYTAELK 214
             + +R+  Y  +++
Sbjct:   239 VSDRQRCYERKIQ 251

 Score = 129 (50.5 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
 Identities = 35/101 (34%), Positives = 54/101 (53%)

Query:   211 AELKEFQRKRERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEEKFK 270
             A + + QR  ER +Q L +L S+             S ++  A I      +  E+EK +
Sbjct:   237 ALVSDRQRCYERKIQMLVNLPSQL------------SHADRQAEIANLRSHVRHEKEKKR 284

Query:   271 KWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKT 311
             ++R ENIRR+HNY+PF+   LK L E  QL  + +KAK ++
Sbjct:   285 RYRKENIRRRHNYLPFIVELLKQLGETGQLMAICDKAKDRS 325


>RGD|1311938 [details] [associations]
            symbol:Bap1 "BRCA1 associated protein-1 (ubiquitin
            carboxy-terminal hydrolase)" species:10116 "Rattus norvegicus"
            [GO:0001558 "regulation of cell growth" evidence=ISO;ISS]
            [GO:0003682 "chromatin binding" evidence=ISO;ISS] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISO;ISS] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISO;ISS]
            [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005730 "nucleolus"
            evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=ISO;ISS] [GO:0035517 "PR-DUB complex" evidence=ISO;ISS]
            [GO:0035522 "monoubiquitinated histone H2A deubiquitination"
            evidence=ISO;ISS] [GO:0043231 "intracellular membrane-bounded
            organelle" evidence=ISO] [GO:0051726 "regulation of cell cycle"
            evidence=ISO;ISS] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=ISO;ISS] InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707
            PROSITE:PS00140 RGD:1311938 GO:GO:0005737 GO:GO:0005730
            GO:GO:0001558 GO:GO:0003682 GO:GO:0051726 GO:GO:0006511
            GO:GO:0071108 GO:GO:0035517 GO:GO:0035522 GO:GO:0004843
            GO:GO:0004221 MEROPS:C12.004 CTD:8314 KO:K08588 Gene3D:3.40.532.10
            PANTHER:PTHR10589 OMA:PQQYSDD GeneTree:ENSGT00510000046560
            EMBL:CH474046 IPI:IPI00870786 RefSeq:NP_001100762.1 UniGene:Rn.3382
            Ensembl:ENSRNOT00000025853 GeneID:306257 KEGG:rno:306257
            UCSC:RGD:1311938 NextBio:655725 Uniprot:D3ZHS6
        Length = 727

 Score = 466 (169.1 bits), Expect = 3.8e-51, Sum P(2) = 3.8e-51
 Identities = 112/245 (45%), Positives = 146/245 (59%)

Query:     3 VKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKW----RPGEK-----DDRVVIKDPNPN-L 52
             VKGVQV               PVYG IFLFKW    R   K     DD  VI D   N +
Sbjct:    24 VKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNSM 80

Query:    53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
             FFA Q+I N+CAT A+LS+LLNC ++D+GP LS++K+FTK F PE KG AI N+  +  A
Sbjct:    81 FFAHQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKA 140

Query:   113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
             HNS ARPEP  +PE+Q   +A +  + +HF+SY+P+ G L+ELDGLK  PI  GP   G+
Sbjct:   141 HNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPW--GE 198

Query:   170 GDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQ 225
              D +W    + VI ERI   +  E    IRFNLMAV+ +R+  Y A L   +  R+ +L+
Sbjct:   199 -DEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRVKYEARLHVLKGNRQTVLE 257

Query:   226 QLASL 230
              L  L
Sbjct:   258 ALQQL 262

 Score = 91 (37.1 bits), Expect = 3.8e-51, Sum P(2) = 3.8e-51
 Identities = 27/71 (38%), Positives = 40/71 (56%)

Query:   237 DKTSFEALNKSLSEVNAGIEGATEKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILA 295
             +K S + L   L  V A I    E  L EE EK KK++ ++ RR HNY  F+  F+ +LA
Sbjct:   623 EKYSPKELLALLKCVEAEIANY-EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLA 681

Query:   296 EKKQLKPLIEK 306
             ++  L  L+E+
Sbjct:   682 QEGMLANLVEQ 692


>UNIPROTKB|F1SIW6 [details] [associations]
            symbol:BAP1 "Ubiquitin carboxyl-terminal hydrolase BAP1"
            species:9823 "Sus scrofa" [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IEA] [GO:0051726 "regulation of cell
            cycle" evidence=IEA] [GO:0035522 "monoubiquitinated histone H2A
            deubiquitination" evidence=IEA] [GO:0035517 "PR-DUB complex"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0001558 "regulation of cell growth" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707
            GO:GO:0005737 GO:GO:0005730 GO:GO:0001558 GO:GO:0003682
            GO:GO:0051726 GO:GO:0006511 GO:GO:0071108 GO:GO:0035517
            GO:GO:0035522 GO:GO:0004843 GO:GO:0004221 CTD:8314 KO:K08588
            Gene3D:3.40.532.10 PANTHER:PTHR10589 OMA:PQQYSDD
            GeneTree:ENSGT00510000046560 EMBL:CU550676 EMBL:GACC01000077
            RefSeq:XP_001925271.3 UniGene:Ssc.1809 Ensembl:ENSSSCT00000012518
            GeneID:100154798 KEGG:ssc:100154798 Uniprot:F1SIW6
        Length = 729

 Score = 465 (168.7 bits), Expect = 5.2e-51, Sum P(2) = 5.2e-51
 Identities = 113/245 (46%), Positives = 145/245 (59%)

Query:     3 VKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKW----RPGEK-----DDRVVIKDPNPN-L 52
             VKGVQV               PVYG IFLFKW    R   K     DD  VI D   N +
Sbjct:    24 VKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNM 80

Query:    53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
             FFA Q+I N+CAT A+LS+LLNC  +D+GP LS++K+FTK F PE KG AI N+  +  A
Sbjct:    81 FFAHQLIPNSCATHALLSVLLNCSSVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKA 140

Query:   113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
             HNS ARPEP  +PE+Q   +A +  + +HF+SY+P+ G L+ELDGLK  PI  GP   G+
Sbjct:   141 HNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPW--GE 198

Query:   170 GDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQ 225
              D +W    + VI ERI   +  E    IRFNLMAV+ +R+  Y A L   +  R+ IL+
Sbjct:   199 -DEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTILE 257

Query:   226 QLASL 230
              L  L
Sbjct:   258 SLQQL 262

 Score = 91 (37.1 bits), Expect = 5.2e-51, Sum P(2) = 5.2e-51
 Identities = 27/71 (38%), Positives = 40/71 (56%)

Query:   237 DKTSFEALNKSLSEVNAGIEGATEKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILA 295
             +K S + L   L  V A I    E  L EE EK KK++ ++ RR HNY  F+  F+ +LA
Sbjct:   625 EKYSPKELLALLKCVEAEIANY-EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLA 683

Query:   296 EKKQLKPLIEK 306
             ++  L  L+E+
Sbjct:   684 QEGMLANLVEQ 694


>UNIPROTKB|E2R3W8 [details] [associations]
            symbol:BAP1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707
            GO:GO:0005622 GO:GO:0006511 GO:GO:0004221 CTD:8314 KO:K08588
            Gene3D:3.40.532.10 PANTHER:PTHR10589 OMA:PQQYSDD
            GeneTree:ENSGT00510000046560 EMBL:AAEX03012197 RefSeq:XP_541853.2
            Ensembl:ENSCAFT00000035819 GeneID:484737 KEGG:cfa:484737
            Uniprot:E2R3W8
        Length = 729

 Score = 463 (168.0 bits), Expect = 8.9e-51, Sum P(2) = 8.9e-51
 Identities = 112/245 (45%), Positives = 145/245 (59%)

Query:     3 VKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKW----RPGEK-----DDRVVIKDPNPN-L 52
             VKGVQV               PVYG IFLFKW    R   K     DD  VI D   N +
Sbjct:    24 VKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNM 80

Query:    53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
             FFA Q+I N+CAT A+LS+LLNC  +D+GP LS++K+FTK F PE KG AI N+  +  A
Sbjct:    81 FFAHQLIPNSCATHALLSVLLNCSSVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKA 140

Query:   113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
             HNS ARPEP  +PE+Q   +A +  + +HF+SY+P+ G L+ELDGLK  PI  GP   G+
Sbjct:   141 HNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPW--GE 198

Query:   170 GDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQ 225
              D +W    + VI ERI   +  E    IRFNLMAV+ +R+  Y A L   +  R+ +L+
Sbjct:   199 -DEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLE 257

Query:   226 QLASL 230
              L  L
Sbjct:   258 ALQQL 262

 Score = 91 (37.1 bits), Expect = 8.9e-51, Sum P(2) = 8.9e-51
 Identities = 27/71 (38%), Positives = 40/71 (56%)

Query:   237 DKTSFEALNKSLSEVNAGIEGATEKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILA 295
             +K S + L   L  V A I    E  L EE EK KK++ ++ RR HNY  F+  F+ +LA
Sbjct:   625 EKYSPKELLALLKCVEAEIANY-EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLA 683

Query:   296 EKKQLKPLIEK 306
             ++  L  L+E+
Sbjct:   684 QEGMLANLVEQ 694


>UNIPROTKB|Q92560 [details] [associations]
            symbol:BAP1 "Ubiquitin carboxyl-terminal hydrolase BAP1"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=NAS] [GO:0006464 "cellular protein modification
            process" evidence=NAS] [GO:0016579 "protein deubiquitination"
            evidence=IDA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IDA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0035517 "PR-DUB complex" evidence=IDA]
            [GO:0035522 "monoubiquitinated histone H2A deubiquitination"
            evidence=IDA] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=IMP] [GO:0051726 "regulation of cell cycle" evidence=IMP]
            [GO:0003682 "chromatin binding" evidence=IDA] [GO:0001558
            "regulation of cell growth" evidence=IMP] [GO:0008285 "negative
            regulation of cell proliferation" evidence=TAS] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0043231 "intracellular
            membrane-bounded organelle" evidence=IDA] InterPro:IPR001578
            Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140 EMBL:AF045581
            GO:GO:0005737 GO:GO:0008285 GO:GO:0005730 GO:GO:0001558
            EMBL:CH471055 GO:GO:0003682 GO:GO:0051726 GO:GO:0006511
            GO:GO:0071108 GO:GO:0035517 GO:GO:0035522 GO:GO:0004843
            GO:GO:0004221 MEROPS:C12.004 CTD:8314 HOVERGEN:HBG054042 KO:K08588
            Gene3D:3.40.532.10 PANTHER:PTHR10589 eggNOG:NOG249036
            HOGENOM:HOG000013189 OrthoDB:EOG4XPQFC EMBL:D88812 EMBL:D87462
            EMBL:AK292608 EMBL:BC001596 EMBL:AY130008 IPI:IPI00465087
            RefSeq:NP_004647.1 UniGene:Hs.106674 ProteinModelPortal:Q92560
            SMR:Q92560 DIP:DIP-47004N IntAct:Q92560 STRING:Q92560
            PhosphoSite:Q92560 DMDM:68565074 PaxDb:Q92560 PRIDE:Q92560
            Ensembl:ENST00000460680 GeneID:8314 KEGG:hsa:8314 UCSC:uc003ddx.3
            GeneCards:GC03M052410 HGNC:HGNC:950 HPA:CAB004322 HPA:HPA028814
            MIM:156240 MIM:603089 MIM:614327 neXtProt:NX_Q92560 Orphanet:289539
            PharmGKB:PA25254 InParanoid:Q92560 OMA:PQQYSDD PhylomeDB:Q92560
            BindingDB:Q92560 ChEMBL:CHEMBL1293314 ChiTaRS:BAP1 GenomeRNAi:8314
            NextBio:31137 ArrayExpress:Q92560 Bgee:Q92560 CleanEx:HS_BAP1
            Genevestigator:Q92560 GermOnline:ENSG00000163930 Uniprot:Q92560
        Length = 729

 Score = 463 (168.0 bits), Expect = 8.9e-51, Sum P(2) = 8.9e-51
 Identities = 112/245 (45%), Positives = 145/245 (59%)

Query:     3 VKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKW----RPGEK-----DDRVVIKDPNPN-L 52
             VKGVQV               PVYG IFLFKW    R   K     DD  VI D   N +
Sbjct:    24 VKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNM 80

Query:    53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
             FFA Q+I N+CAT A+LS+LLNC  +D+GP LS++K+FTK F PE KG AI N+  +  A
Sbjct:    81 FFAHQLIPNSCATHALLSVLLNCSSVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKA 140

Query:   113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
             HNS ARPEP  +PE+Q   +A +  + +HF+SY+P+ G L+ELDGLK  PI  GP   G+
Sbjct:   141 HNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPW--GE 198

Query:   170 GDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQ 225
              D +W    + VI ERI   +  E    IRFNLMAV+ +R+  Y A L   +  R+ +L+
Sbjct:   199 -DEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLE 257

Query:   226 QLASL 230
              L  L
Sbjct:   258 ALQQL 262

 Score = 91 (37.1 bits), Expect = 8.9e-51, Sum P(2) = 8.9e-51
 Identities = 27/71 (38%), Positives = 40/71 (56%)

Query:   237 DKTSFEALNKSLSEVNAGIEGATEKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILA 295
             +K S + L   L  V A I    E  L EE EK KK++ ++ RR HNY  F+  F+ +LA
Sbjct:   625 EKYSPKELLALLKCVEAEIANY-EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLA 683

Query:   296 EKKQLKPLIEK 306
             ++  L  L+E+
Sbjct:   684 QEGMLANLVEQ 694


>MGI|MGI:1206586 [details] [associations]
            symbol:Bap1 "Brca1 associated protein 1" species:10090 "Mus
            musculus" [GO:0001558 "regulation of cell growth" evidence=ISO]
            [GO:0003682 "chromatin binding" evidence=ISO] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISO;ISA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISO] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;ISA] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008285 "negative regulation of cell proliferation"
            evidence=ISA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=ISO;ISA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0035517 "PR-DUB
            complex" evidence=ISO] [GO:0035522 "monoubiquitinated histone H2A
            deubiquitination" evidence=ISO] [GO:0051726 "regulation of cell
            cycle" evidence=ISO] [GO:0071108 "protein K48-linked
            deubiquitination" evidence=ISO] InterPro:IPR001578 Pfam:PF01088
            PRINTS:PR00707 PROSITE:PS00140 MGI:MGI:1206586 GO:GO:0005737
            GO:GO:0008285 GO:GO:0005730 GO:GO:0001558 GO:GO:0003682
            GO:GO:0051726 GO:GO:0006511 GO:GO:0071108 GO:GO:0035517
            GO:GO:0035522 GO:GO:0004843 GO:GO:0004221 MEROPS:C12.004 CTD:8314
            HOVERGEN:HBG054042 KO:K08588 Gene3D:3.40.532.10 PANTHER:PTHR10589
            eggNOG:NOG249036 HOGENOM:HOG000013189 OrthoDB:EOG4XPQFC OMA:PQQYSDD
            ChiTaRS:BAP1 EMBL:AB047820 EMBL:AK129108 EMBL:AK170576
            EMBL:BC050901 IPI:IPI00453853 RefSeq:NP_081364.1 UniGene:Mm.3779
            ProteinModelPortal:Q99PU7 SMR:Q99PU7 IntAct:Q99PU7 STRING:Q99PU7
            PhosphoSite:Q99PU7 PRIDE:Q99PU7 Ensembl:ENSMUST00000022458
            GeneID:104416 KEGG:mmu:104416 UCSC:uc007sxh.1
            GeneTree:ENSGT00510000046560 InParanoid:Q3TCR6 NextBio:357097
            Bgee:Q99PU7 CleanEx:MM_BAP1 Genevestigator:Q99PU7
            GermOnline:ENSMUSG00000021901 Uniprot:Q99PU7
        Length = 728

 Score = 460 (167.0 bits), Expect = 2.0e-50, Sum P(2) = 2.0e-50
 Identities = 111/245 (45%), Positives = 145/245 (59%)

Query:     3 VKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKW----RPGEK-----DDRVVIKDPNPN-L 52
             VKGVQV               PVYG IFLFKW    R   K     DD  VI D   N +
Sbjct:    24 VKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNM 80

Query:    53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
             FFA Q+I N+CAT A+LS+LLNC ++D+GP LS++K+FTK F PE KG AI N+  +  A
Sbjct:    81 FFAHQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKA 140

Query:   113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
             HNS ARPEP  +PE+Q   +A +  + +HF+SY+P+ G L+ELDGLK  PI  GP   G+
Sbjct:   141 HNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPW--GE 198

Query:   170 GDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQ 225
              D +W    + VI ERI   +  E    IRFNLMAV+ +R+  Y   L   +  R+ +L+
Sbjct:   199 -DEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIKYETRLHVLKVNRQTVLE 257

Query:   226 QLASL 230
              L  L
Sbjct:   258 ALQQL 262

 Score = 91 (37.1 bits), Expect = 2.0e-50, Sum P(2) = 2.0e-50
 Identities = 27/71 (38%), Positives = 40/71 (56%)

Query:   237 DKTSFEALNKSLSEVNAGIEGATEKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILA 295
             +K S + L   L  V A I    E  L EE EK KK++ ++ RR HNY  F+  F+ +LA
Sbjct:   624 EKYSPKELLALLKCVEAEIANY-EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLA 682

Query:   296 EKKQLKPLIEK 306
             ++  L  L+E+
Sbjct:   683 QEGMLANLVEQ 693


>UNIPROTKB|F1NVF5 [details] [associations]
            symbol:BAP1 "Ubiquitin carboxyl-terminal hydrolase BAP1"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0001558 "regulation of cell
            growth" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0035517 "PR-DUB complex" evidence=IEA]
            [GO:0035522 "monoubiquitinated histone H2A deubiquitination"
            evidence=IEA] [GO:0051726 "regulation of cell cycle" evidence=IEA]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 GO:GO:0005737
            GO:GO:0005730 GO:GO:0001558 GO:GO:0003682 GO:GO:0051726
            GO:GO:0006511 GO:GO:0071108 GO:GO:0035517 GO:GO:0035522
            GO:GO:0004843 GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589
            IPI:IPI00572217 OMA:PQQYSDD GeneTree:ENSGT00510000046560
            EMBL:AADN02056432 Ensembl:ENSGALT00000006965 Uniprot:F1NVF5
        Length = 700

 Score = 457 (165.9 bits), Expect = 2.4e-50, Sum P(2) = 2.4e-50
 Identities = 109/245 (44%), Positives = 145/245 (59%)

Query:     3 VKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKW----RPGEK-----DDRVVIKDPNPN-L 52
             VKGVQV               PVYG IFLFKW    R   K     D+  VI D   N +
Sbjct:    24 VKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRKVSTLVDETSVIDDDIVNNM 80

Query:    53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
             FFA Q+I N+CAT A+LS+LLNC ++D+GP LS++K+FTK F PE KG AI N+  +  A
Sbjct:    81 FFAHQLIPNSCATHALLSVLLNCNNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKA 140

Query:   113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
             HNS ARPEP  +PE+Q   +A +  + +HF+SY+P+ G L+ELDGLK  PI  GP     
Sbjct:   141 HNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKGRLFELDGLKVYPIDHGPWAD-- 198

Query:   170 GDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQ 225
              D +W    + VI ERI   +  E    IRFNLMAV+ +R+  Y ++L   +  R+ +L+
Sbjct:   199 -DEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRMKYESKLHILKMNRQTVLE 257

Query:   226 QLASL 230
              L  L
Sbjct:   258 ALQQL 262

 Score = 91 (37.1 bits), Expect = 2.4e-50, Sum P(2) = 2.4e-50
 Identities = 20/48 (41%), Positives = 31/48 (64%)

Query:   260 EKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
             E  L EE EK KK++ ++ RR HNY  F+  F+ +LA++  L  L+E+
Sbjct:   618 EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLASLVEQ 665


>UNIPROTKB|Q66JB6 [details] [associations]
            symbol:bap1 "Ubiquitin carboxyl-terminal hydrolase BAP1"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0001558
            "regulation of cell growth" evidence=ISS] [GO:0003682 "chromatin
            binding" evidence=ISS] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0016579 "protein
            deubiquitination" evidence=ISS] [GO:0035517 "PR-DUB complex"
            evidence=ISS] [GO:0035522 "monoubiquitinated histone H2A
            deubiquitination" evidence=ISS] [GO:0051726 "regulation of cell
            cycle" evidence=ISS] [GO:0071108 "protein K48-linked
            deubiquitination" evidence=ISS] InterPro:IPR001578 Pfam:PF01088
            PRINTS:PR00707 PROSITE:PS00140 GO:GO:0005737 GO:GO:0001558
            GO:GO:0003682 GO:GO:0051726 GO:GO:0006511 GO:GO:0071108
            GO:GO:0035517 GO:GO:0035522 GO:GO:0004843 GO:GO:0004221
            MEROPS:C12.004 CTD:8314 HOVERGEN:HBG054042 KO:K08588
            Gene3D:3.40.532.10 PANTHER:PTHR10589 eggNOG:NOG249036
            HOGENOM:HOG000013189 OrthoDB:EOG4XPQFC EMBL:CR848566 EMBL:BC080985
            RefSeq:NP_001008206.1 UniGene:Str.10136 ProteinModelPortal:Q66JB6
            STRING:Q66JB6 GeneID:493568 KEGG:xtr:493568 Xenbase:XB-GENE-494978
            InParanoid:Q66JB6 Uniprot:Q66JB6
        Length = 685

 Score = 452 (164.2 bits), Expect = 2.5e-50, Sum P(2) = 2.5e-50
 Identities = 109/245 (44%), Positives = 144/245 (58%)

Query:     3 VKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKW----RPGEK-----DDRVVIKDPNPN-L 52
             VKGVQV               PVYG IFLFKW    R   K     DD  V++D   N +
Sbjct:    24 VKGVQVEEIYDLQSKCPG---PVYGFIFLFKWIEERRSRRKVSTLLDDTSVMEDEVVNNM 80

Query:    53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
             FFA Q+I N+CAT A+LS+LLNC  + +GP LS++KEFTK F PE KG AI N+  +  A
Sbjct:    81 FFAHQLIPNSCATHALLSVLLNCSGVHLGPTLSRIKEFTKGFSPESKGYAIGNAPELAKA 140

Query:   113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
             HNS ARPEP  +PE+Q   +A +  + +HF+SY+P+ G L+ELDGLK  PI  GP     
Sbjct:   141 HNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKGRLFELDGLKVYPIDHGPWAE-- 198

Query:   170 GDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQ 225
              D +W    + VI ERI   +  E    IRFNLMAV+ +R+  Y ++L   +  R+ +L+
Sbjct:   199 -DEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRLKYESKLHILKMNRQTVLE 257

Query:   226 QLASL 230
              L  L
Sbjct:   258 ALQQL 262

 Score = 95 (38.5 bits), Expect = 2.5e-50, Sum P(2) = 2.5e-50
 Identities = 27/71 (38%), Positives = 42/71 (59%)

Query:   237 DKTSFEALNKSLSEVNAGIEGATEKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILA 295
             +K S + L   L  V A I  ++E  L EE EK KK++ ++ RR HNY  F+  F+ +LA
Sbjct:   581 EKFSPKELLALLKCVEAEIS-SSEACLREELEKRKKFKIDDQRRTHNYDEFICAFISMLA 639

Query:   296 EKKQLKPLIEK 306
             ++  L  L+E+
Sbjct:   640 QEGMLASLVEQ 650


>ZFIN|ZDB-GENE-050208-492 [details] [associations]
            symbol:bap1 "BRCA1 associated protein-1 (ubiquitin
            carboxy-terminal hydrolase)" species:7955 "Danio rerio" [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA;ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0003682 "chromatin
            binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0001558
            "regulation of cell growth" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=IEA;ISS] [GO:0035517 "PR-DUB complex" evidence=ISS]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
            [GO:0035522 "monoubiquitinated histone H2A deubiquitination"
            evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=ISS]
            [GO:0007219 "Notch signaling pathway" evidence=IMP] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] InterPro:IPR001578
            Pfam:PF01088 PRINTS:PR00707 ZFIN:ZDB-GENE-050208-492 GO:GO:0007219
            GO:GO:0005622 GO:GO:0006511 GO:GO:0004221 CTD:8314 KO:K08588
            Gene3D:3.40.532.10 PANTHER:PTHR10589 GeneTree:ENSGT00510000046560
            EMBL:BX465868 IPI:IPI00491066 RefSeq:NP_001157309.1
            UniGene:Dr.37720 Ensembl:ENSDART00000091777 GeneID:558885
            KEGG:dre:558885 NextBio:20882678 Bgee:F1QJ12 Uniprot:F1QJ12
        Length = 755

 Score = 453 (164.5 bits), Expect = 1.5e-49, Sum P(2) = 1.5e-49
 Identities = 114/282 (40%), Positives = 162/282 (57%)

Query:     3 VKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKW----RPGEK-----DDRVVIKDPNPN-L 52
             VKGVQV               PVYG IFLFKW    R   K     D+  VI D   N +
Sbjct:    24 VKGVQVEEIYDLQSKCQS---PVYGFIFLFKWIEERRSRRKVSTLVDETSVIDDDIVNDM 80

Query:    53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
             FFA Q+I N+CAT A+LS+LLNC  +++G  LS++K FTK F PE KG AI N+  +  A
Sbjct:    81 FFAHQLIPNSCATHALLSVLLNCSGVELGMTLSRMKAFTKGFNPESKGYAIGNAPELAKA 140

Query:   113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
             HNS ARPEP  +PE+Q   +A +  + +HF+SY+P+   L+ELDGLK  PI  GP   G+
Sbjct:   141 HNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKDRLFELDGLKAYPIDHGPW--GE 198

Query:   170 GDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQ 225
              D +W    + VI ERI   +  E    IRFNLMAV+ +R+  Y ++L   +R R+ IL+
Sbjct:   199 -DEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIKYESKLDILKRNRQIILE 257

Query:   226 QLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE 267
              L  ++ ++++  T  E+      + ++  E  T  ++ +EE
Sbjct:   258 GLQQIREKKVIRMTQQESGQDRKQQDSSSSED-TPPVVKKEE 298

 Score = 92 (37.4 bits), Expect = 1.5e-49, Sum P(2) = 1.5e-49
 Identities = 24/60 (40%), Positives = 35/60 (58%)

Query:   248 LSEVNAGIEGATEKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
             L  V A I    E  L EE EK KK++ ++ RR HNY  F+  F+ +LA++  L  L+E+
Sbjct:   662 LKYVEADIANY-EVYLKEEVEKRKKYKIDDQRRTHNYDEFICTFISMLAQEGMLASLVEQ 720


>UNIPROTKB|Q5F3N6 [details] [associations]
            symbol:BAP1 "Ubiquitin carboxyl-terminal hydrolase BAP1"
            species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0035517 "PR-DUB
            complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0003682 "chromatin
            binding" evidence=ISS] [GO:0071108 "protein K48-linked
            deubiquitination" evidence=ISS] [GO:0051726 "regulation of cell
            cycle" evidence=ISS] [GO:0035522 "monoubiquitinated histone H2A
            deubiquitination" evidence=ISS] [GO:0016579 "protein
            deubiquitination" evidence=ISS] [GO:0001558 "regulation of cell
            growth" evidence=ISS] InterPro:IPR001578 Pfam:PF01088
            PRINTS:PR00707 PROSITE:PS00140 GO:GO:0005737 GO:GO:0001558
            GO:GO:0003682 GO:GO:0051726 GO:GO:0006511 GO:GO:0071108
            GO:GO:0035517 GO:GO:0035522 GO:GO:0004843 GO:GO:0004221
            MEROPS:C12.004 CTD:8314 HOVERGEN:HBG054042 KO:K08588
            Gene3D:3.40.532.10 PANTHER:PTHR10589 eggNOG:NOG249036 EMBL:AJ851614
            IPI:IPI00572217 RefSeq:NP_001025761.1 UniGene:Gga.5871
            ProteinModelPortal:Q5F3N6 STRING:Q5F3N6 GeneID:415944
            KEGG:gga:415944 HOGENOM:HOG000013189 InParanoid:Q5F3N6
            OrthoDB:EOG4XPQFC NextBio:20819470 Uniprot:Q5F3N6
        Length = 700

 Score = 449 (163.1 bits), Expect = 2.1e-49, Sum P(2) = 2.1e-49
 Identities = 108/245 (44%), Positives = 144/245 (58%)

Query:     3 VKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKW----RPGEK-----DDRVVIKDPNPN-L 52
             VKGVQV               PVYG IFLFKW    R   K     D+  VI D   N +
Sbjct:    24 VKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEESRSRRKVSTLVDETSVIDDDIVNNM 80

Query:    53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
             FFA Q+I N+CAT A+LS+LLNC ++D+GP LS++K+FTK F PE KG AI N+  +  A
Sbjct:    81 FFAHQLIPNSCATHALLSVLLNCNNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKA 140

Query:   113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
              NS ARPEP  +PE+Q   +A +  + +HF+SY+P+ G L+ELDGLK  PI  GP     
Sbjct:   141 RNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKGRLFELDGLKVYPIDHGPWAD-- 198

Query:   170 GDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQ 225
              D +W    + VI ERI   +  E    IRFNLMAV+ +R+  Y ++L   +  R+ +L+
Sbjct:   199 -DEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRMKYESKLHILKMNRQTVLE 257

Query:   226 QLASL 230
              L  L
Sbjct:   258 ALQQL 262

 Score = 91 (37.1 bits), Expect = 2.1e-49, Sum P(2) = 2.1e-49
 Identities = 20/48 (41%), Positives = 31/48 (64%)

Query:   260 EKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
             E  L EE EK KK++ ++ RR HNY  F+  F+ +LA++  L  L+E+
Sbjct:   618 EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLASLVEQ 665


>UNIPROTKB|C4A0D9 [details] [associations]
            symbol:BAP1 "Ubiquitin carboxyl-terminal hydrolase BAP1"
            species:7739 "Branchiostoma floridae" [GO:0001558 "regulation of
            cell growth" evidence=ISS] [GO:0003682 "chromatin binding"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0035517 "PR-DUB complex" evidence=ISS]
            [GO:0035522 "monoubiquitinated histone H2A deubiquitination"
            evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=ISS]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140
            GO:GO:0005737 GO:GO:0001558 GO:GO:0003682 GO:GO:0051726
            GO:GO:0006511 GO:GO:0071108 GO:GO:0035517 GO:GO:0035522
            GO:GO:0004843 GO:GO:0004221 MEROPS:C12.004 KO:K08588
            Gene3D:3.40.532.10 PANTHER:PTHR10589 EMBL:GG666800
            RefSeq:XP_002585731.1 GeneID:7222775 KEGG:bfo:BRAFLDRAFT_277645
            eggNOG:NOG249036 OMA:SERIGNA Uniprot:C4A0D9
        Length = 694

 Score = 421 (153.3 bits), Expect = 1.5e-47, Sum P(2) = 1.5e-47
 Identities = 102/242 (42%), Positives = 138/242 (57%)

Query:     3 VKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWR----------PGEKDDRVVIKDPNPNL 52
             VKGVQV               PVYG IFLFKW           P  ++  VV +D   ++
Sbjct:    24 VKGVQVEEIYDLSKPIEG---PVYGFIFLFKWSEERRSRRKVGPSMEESFVVDEDIVNDM 80

Query:    53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
             FFA Q+I N+CAT A+LS+LLNCP I +G  L++LK FT+   PE KG AI N   I  A
Sbjct:    81 FFAQQLIPNSCATHALLSVLLNCPQISLGSTLTRLKYFTRGMGPESKGWAIGNVPEIARA 140

Query:   113 HNSFARPEP-FVPEEQKAAG--KDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
             HNS ARPEP  +PE+Q      +  + +HF+SY+  +  L+ELDGLK  PI  GP   G+
Sbjct:   141 HNSHARPEPRHLPEKQTGISSVRTAEAFHFVSYVTTNDRLFELDGLKPYPIDHGPW--GE 198

Query:   170 GDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQ 225
              + DW +  + VI ERI   +  E    IRFNLMAV+ +R++ Y  +L   +  R+ +L+
Sbjct:   199 KE-DWTEKFRRVISERIGNATGGENGHDIRFNLMAVVADRRQQYETKLNTLKTNRQIVLE 257

Query:   226 QL 227
              L
Sbjct:   258 AL 259

 Score = 104 (41.7 bits), Expect = 1.5e-47, Sum P(2) = 1.5e-47
 Identities = 22/59 (37%), Positives = 36/59 (61%)

Query:   248 LSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
             L  V   I+   + +  E EK KK++ ++ RR HNY  F+  FL++LAE+ QL  L+++
Sbjct:   597 LKNVETEIQICEQHLKDEIEKRKKYKVDDCRRTHNYDDFIRTFLRMLAEQGQLSKLVDQ 655


>POMBASE|SPBC409.06 [details] [associations]
            symbol:uch2 "ubiquitin C-terminal hydrolase Uch2"
            species:4896 "Schizosaccharomyces pombe" [GO:0000502 "proteasome
            complex" evidence=IDA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0008242 "omega peptidase activity" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=IDA] [GO:0034399 "nuclear
            periphery" evidence=IDA] [GO:0043161 "proteasomal
            ubiquitin-dependent protein catabolic process" evidence=IC]
            [GO:0071947 "protein deubiquitination involved in
            ubiquitin-dependent protein catabolic process" evidence=IC]
            InterPro:IPR001578 InterPro:IPR017390 Pfam:PF01088
            PIRSF:PIRSF038120 PRINTS:PR00707 PROSITE:PS00140 PomBase:SPBC409.06
            GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000502
            GO:GO:0034399 GO:GO:0008242 GO:GO:0004843 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 HOGENOM:HOG000203918
            GO:GO:0071947 eggNOG:NOG321645 KO:K05610 PIR:T40434
            RefSeq:NP_595456.1 ProteinModelPortal:Q9UUB6 IntAct:Q9UUB6
            STRING:Q9UUB6 MEROPS:C12.009 PRIDE:Q9UUB6 EnsemblFungi:SPBC409.06.1
            GeneID:2540956 KEGG:spo:SPBC409.06 OMA:DESEMET OrthoDB:EOG4VT96P
            NextBio:20802071 Uniprot:Q9UUB6
        Length = 300

 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 117/276 (42%), Positives = 160/276 (57%)

Query:     3 VKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPG-EKDDRVVIKDPNPNLFFASQVINN 61
             VK V+V                +YG+IFLFKW    +K D  +  D   N+FFA QVINN
Sbjct:    22 VKDVEVDELYSLDVDSLRQFPDIYGIIFLFKWNSKVDKPDGTMDYDSMDNIFFAKQVINN 81

Query:    62 ACATQAILSILLNCPD-IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPE 120
             ACATQA+LS+LLN  D ID+G  LS+ K+F+K  PPELKG A+ NS+ IR  HNSFAR +
Sbjct:    82 ACATQALLSVLLNHSDEIDLGTTLSEFKDFSKTLPPELKGEALGNSEHIRCCHNSFARSD 141

Query:   121 PFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQP 180
             PF+ EE +AA  +D+VYHFI+Y  ++ V YELDGL+  PI+ G CT      ++ +    
Sbjct:   142 PFISEEVRAATDEDEVYHFIAYTNINNVFYELDGLQAAPINHGSCT----KEEFAEKAVS 197

Query:   181 VIQERIERYSKSEIRFNLMAVIKNRK-ELYTAE-LKEFQRKRERILQQLASLQ--SERMV 236
             VIQ RI  Y  +EIRFNLM + K++K  L T E L + ++     ++    L+   E  +
Sbjct:   198 VIQARIANYDPAEIRFNLMVICKDKKASLLTREDLTDEEKAASIAVEDEKRLRWKRENQL 257

Query:   237 DKTSFEALNKSLSE--VNAGIEGATEKILMEEEKFK 270
              + +F  L   LS+  V   I+  T    +E  K K
Sbjct:   258 RRHNFVGLFVELSKLLVKDRIDKNTWNSTLETAKAK 293


>UNIPROTKB|E2R9Z2 [details] [associations]
            symbol:BAP1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707
            GO:GO:0005622 GO:GO:0006511 GO:GO:0004221 Gene3D:3.40.532.10
            PANTHER:PTHR10589 GeneTree:ENSGT00510000046560 EMBL:AAEX03012197
            Ensembl:ENSCAFT00000015130 NextBio:20858815 Uniprot:E2R9Z2
        Length = 729

 Score = 430 (156.4 bits), Expect = 5.5e-47, Sum P(2) = 5.5e-47
 Identities = 107/245 (43%), Positives = 140/245 (57%)

Query:     3 VKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKW----RPGEK-----DDRVVIKDPNPN-L 52
             VKGVQV               PVYG IFLFKW    R   K     DD  VI D   N +
Sbjct:    24 VKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNM 80

Query:    53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
             FFA Q+I N+CAT A+LS+LLNC  +D+GP LS++K+FTK F PEL G+ +       A 
Sbjct:    81 FFAHQLIPNSCATHALLSVLLNCSSVDLGPTLSRMKDFTKGFSPELMGIGVGRVVLFWAL 140

Query:   113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
               SF RPEP  +PE+Q   +A +  + +HF+SY+P+ G L+ELDGLK  PI  GP   G+
Sbjct:   141 SLSFPRPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPW--GE 198

Query:   170 GDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQ 225
              D +W    + VI ERI   +  E    IRFNLMAV+ +R+  Y A L   +  R+ +L+
Sbjct:   199 -DEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLE 257

Query:   226 QLASL 230
              L  L
Sbjct:   258 ALQQL 262

 Score = 91 (37.1 bits), Expect = 5.5e-47, Sum P(2) = 5.5e-47
 Identities = 27/71 (38%), Positives = 40/71 (56%)

Query:   237 DKTSFEALNKSLSEVNAGIEGATEKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILA 295
             +K S + L   L  V A I    E  L EE EK KK++ ++ RR HNY  F+  F+ +LA
Sbjct:   625 EKYSPKELLALLKCVEAEIANY-EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLA 683

Query:   296 EKKQLKPLIEK 306
             ++  L  L+E+
Sbjct:   684 QEGMLANLVEQ 694


>UNIPROTKB|F8W6N3 [details] [associations]
            symbol:BAP1 "Ubiquitin carboxyl-terminal hydrolase BAP1"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707
            GO:GO:0005622 GO:GO:0006511 GO:GO:0004221 Gene3D:3.40.532.10
            PANTHER:PTHR10589 HGNC:HGNC:950 ChiTaRS:BAP1 EMBL:AC092045
            IPI:IPI00947312 ProteinModelPortal:F8W6N3 PRIDE:F8W6N3
            Ensembl:ENST00000296288 ArrayExpress:F8W6N3 Bgee:F8W6N3
            Uniprot:F8W6N3
        Length = 711

 Score = 423 (154.0 bits), Expect = 2.6e-46, Sum P(2) = 2.6e-46
 Identities = 111/261 (42%), Positives = 150/261 (57%)

Query:     3 VKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKW----RPGEK-----DDRVVIKDPNPN-L 52
             VKGVQV               PVYG IFLFKW    R   K     DD  VI D   N +
Sbjct:    24 VKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNM 80

Query:    53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
             FFA Q+I N+CAT A+LS+LLNC  +D+GP LS++K+FTK F PE KG AI N+  +  A
Sbjct:    81 FFAHQLIPNSCATHALLSVLLNCSSVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKA 140

Query:   113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
             HNS ARPEP  +PE+Q   +A +  + +HF+SY+P+ G L+ELDGLK  PI  GP   G+
Sbjct:   141 HNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPW--GE 198

Query:   170 GDMDWLQMVQPVIQERIERYS---KSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQ 226
              D +W    + VI ERI   +   K E R +++ V  NR+ +  A L++  R  +  L Q
Sbjct:   199 -DEEWTDKARRVIMERIGLATAGIKYEARLHVLKV--NRQTVLEA-LQQLIRVTQPELIQ 254

Query:   227 LASLQSERMVDKTSFEALNKS 247
                 Q  ++ +++   A NKS
Sbjct:   255 THKSQESQLPEESK-SASNKS 274

 Score = 91 (37.1 bits), Expect = 2.6e-46, Sum P(2) = 2.6e-46
 Identities = 27/71 (38%), Positives = 40/71 (56%)

Query:   237 DKTSFEALNKSLSEVNAGIEGATEKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILA 295
             +K S + L   L  V A I    E  L EE EK KK++ ++ RR HNY  F+  F+ +LA
Sbjct:   607 EKYSPKELLALLKCVEAEIANY-EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLA 665

Query:   296 EKKQLKPLIEK 306
             ++  L  L+E+
Sbjct:   666 QEGMLANLVEQ 676


>UNIPROTKB|A2VDM8 [details] [associations]
            symbol:BAP1 "Ubiquitin carboxyl-terminal hydrolase BAP1"
            species:9913 "Bos taurus" [GO:0001558 "regulation of cell growth"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0035522 "monoubiquitinated histone H2A deubiquitination"
            evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=ISS]
            [GO:0003682 "chromatin binding" evidence=ISS] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
            [GO:0035517 "PR-DUB complex" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140
            GO:GO:0005737 GO:GO:0001558 GO:GO:0003682 GO:GO:0051726
            GO:GO:0006511 GO:GO:0071108 GO:GO:0035517 GO:GO:0035522
            GO:GO:0004843 GO:GO:0004221 EMBL:BC133317 IPI:IPI00842063
            RefSeq:NP_001096019.1 UniGene:Bt.20209 ProteinModelPortal:A2VDM8
            MEROPS:C12.004 GeneID:100124510 KEGG:bta:100124510 CTD:8314
            HOVERGEN:HBG054042 KO:K08588 NextBio:20788729 Gene3D:3.40.532.10
            PANTHER:PTHR10589 Uniprot:A2VDM8
        Length = 711

 Score = 418 (152.2 bits), Expect = 3.7e-46, Sum P(2) = 3.7e-46
 Identities = 110/261 (42%), Positives = 151/261 (57%)

Query:     3 VKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKW----RPGEK-----DDRVVIKDPNPN-L 52
             VKGVQV               PVYG IFLFKW    R   K     DD  VI D   N +
Sbjct:    24 VKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNM 80

Query:    53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
             FFA Q+I N+CAT A+LS+LLNC ++D+GP LS++K+FTK F PE KG AI N+  +  A
Sbjct:    81 FFAHQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKA 140

Query:   113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
             HNS ARPEP  +PE+Q   +A +  + +HF+SY+P+ G L+ELDGLK  PI  GP   G+
Sbjct:   141 HNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPW--GE 198

Query:   170 GDMDWLQMVQPVIQERIERYS---KSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQ 226
              D +W    + VI ERI   +   K E R +++ V  NR+ +  A L++  R  +  L Q
Sbjct:   199 -DEEWTDKARRVIMERIGLATAGIKYEARLHVLKV--NRQTVLEA-LQQLIRVTQPELIQ 254

Query:   227 LASLQSERMVDKTSFEALNKS 247
                 Q  ++ +++   A +KS
Sbjct:   255 THKSQESQLPEESK-PASSKS 274

 Score = 95 (38.5 bits), Expect = 3.7e-46, Sum P(2) = 3.7e-46
 Identities = 27/89 (30%), Positives = 47/89 (52%)

Query:   218 RKRERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENI 277
             R++  +++   SL  E+   K    AL K +    A  E   ++   E EK KK++ ++ 
Sbjct:   592 REKPGLVRPSESLNGEKYSPKELL-ALLKCVEAEIANYEACLKE---EVEKRKKFKIDDQ 647

Query:   278 RRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
             RR HNY  F+  F+ +LA++  L  L+E+
Sbjct:   648 RRTHNYDEFICTFISMLAQEGMLANLVEQ 676


>UNIPROTKB|F1SAA5 [details] [associations]
            symbol:UCHL5 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L5" species:9823 "Sus scrofa" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0005622
            "intracellular" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001578 Pfam:PF01088
            PRINTS:PR00707 GO:GO:0005829 GO:GO:0004866 GO:GO:0031011
            GO:GO:0030901 GO:GO:0006511 GO:GO:0021670 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589
            GeneTree:ENSGT00510000046560 GO:GO:0061136 GO:GO:0048853
            EMBL:CU929655 Ensembl:ENSSSCT00000011821 OMA:YILQVIN
            ArrayExpress:F1SAA5 Uniprot:F1SAA5
        Length = 252

 Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
 Identities = 97/201 (48%), Positives = 138/201 (68%)

Query:    53 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 110
             F+  QVINNACATQAI+S+LLNC   D+ +G  LS+ KEF+++F   +KGLA++NSD IR
Sbjct:     1 FYILQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIR 60

Query:   111 AAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQG 170
               HNSFAR + F   + K + K++D +HF+SY+PV+G LYELDGL+EGPI LG C     
Sbjct:    61 QVHNSFARQQMF-EFDAKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD-- 117

Query:   171 DMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASL 230
               DW+  V+PVI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR+     + + + 
Sbjct:   118 --DWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQLAEE-EPMDTD 174

Query:   231 QSERMVDKTSFE-ALNKSLSE 250
             Q   M+     E A N+ L E
Sbjct:   175 QGSNMLSAIQSEVAKNQMLIE 195

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 68/154 (44%), Positives = 96/154 (62%)

Query:   163 GPCT-GGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRE 221
             GP   G     DW+  V+PVI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR   
Sbjct:   107 GPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR--- 163

Query:   222 RILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRR 279
                 QLA  + E M        L+   SEV      A  ++L+EEE  K K+++ ENIRR
Sbjct:   164 ----QLA--EEEPMDTDQGSNMLSAIQSEV------AKNQMLIEEEVQKLKRYKIENIRR 211

Query:   280 KHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSS 313
             KHNY+PF+   LK LAE +QL PL+EKAK+K ++
Sbjct:   212 KHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNA 245


>UNIPROTKB|G3MYU1 [details] [associations]
            symbol:BAP1 "Ubiquitin carboxyl-terminal hydrolase BAP1"
            species:9913 "Bos taurus" [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IEA] [GO:0051726 "regulation of cell
            cycle" evidence=IEA] [GO:0035522 "monoubiquitinated histone H2A
            deubiquitination" evidence=IEA] [GO:0035517 "PR-DUB complex"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0001558 "regulation of cell growth" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707
            GO:GO:0005737 GO:GO:0005730 GO:GO:0001558 GO:GO:0003682
            GO:GO:0051726 GO:GO:0006511 GO:GO:0071108 GO:GO:0035517
            GO:GO:0035522 GO:GO:0004843 GO:GO:0004221 Gene3D:3.40.532.10
            PANTHER:PTHR10589 OMA:PQQYSDD GeneTree:ENSGT00510000046560
            EMBL:DAAA02054377 EMBL:DAAA02054378 Ensembl:ENSBTAT00000064109
            Uniprot:G3MYU1
        Length = 664

 Score = 418 (152.2 bits), Expect = 3.1e-45, Sum P(2) = 3.1e-45
 Identities = 110/261 (42%), Positives = 151/261 (57%)

Query:     3 VKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKW----RPGEK-----DDRVVIKDPNPN-L 52
             VKGVQV               PVYG IFLFKW    R   K     DD  VI D   N +
Sbjct:    24 VKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNM 80

Query:    53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
             FFA Q+I N+CAT A+LS+LLNC ++D+GP LS++K+FTK F PE KG AI N+  +  A
Sbjct:    81 FFAHQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKA 140

Query:   113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
             HNS ARPEP  +PE+Q   +A +  + +HF+SY+P+ G L+ELDGLK  PI  GP   G+
Sbjct:   141 HNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPW--GE 198

Query:   170 GDMDWLQMVQPVIQERIERYS---KSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQ 226
              D +W    + VI ERI   +   K E R +++ V  NR+ +  A L++  R  +  L Q
Sbjct:   199 -DEEWTDKARRVIMERIGLATAGIKYEARLHVLKV--NRQTVLEA-LQQLIRVTQPELIQ 254

Query:   227 LASLQSERMVDKTSFEALNKS 247
                 Q  ++ +++   A +KS
Sbjct:   255 THKSQESQLPEESK-PASSKS 274

 Score = 83 (34.3 bits), Expect = 3.1e-45, Sum P(2) = 3.1e-45
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query:   218 RKRERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENI 277
             R++  +++   SL  E+   K    AL K +    A  E   ++   E EK KK++ ++ 
Sbjct:   588 REKPGLVRPSESLNGEKYSPKELL-ALLKCVEAEIANYEACLKE---EVEKRKKFKIDDQ 643

Query:   278 RRKHNYIPFLFNFLKILAEK 297
             RR HNY  F+  F+ +LA++
Sbjct:   644 RRTHNYDEFICTFISMLAQE 663


>UNIPROTKB|A7SU48 [details] [associations]
            symbol:v1g217532 "Predicted protein" species:45351
            "Nematostella vectensis" [GO:0000790 "nuclear chromatin"
            evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=ISS]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
            [GO:0006342 "chromatin silencing" evidence=ISS] [GO:0035517 "PR-DUB
            complex" evidence=ISS] [GO:0035522 "monoubiquitinated histone H2A
            deubiquitination" evidence=ISS] InterPro:IPR001578 Pfam:PF01088
            PRINTS:PR00707 GO:GO:0003682 GO:GO:0000790 GO:GO:0006511
            GO:GO:0006342 GO:GO:0035517 GO:GO:0035522 GO:GO:0004843
            GO:GO:0004221 KO:K08588 Gene3D:3.40.532.10 PANTHER:PTHR10589
            eggNOG:NOG249036 HOGENOM:HOG000203918 EMBL:DS469807
            RefSeq:XP_001624876.1 UniGene:Nve.16891 ProteinModelPortal:A7SU48
            EnsemblMetazoa:NEMVEDRAFT_v1g217532-RA GeneID:5503931
            KEGG:nve:NEMVE_v1g217532 OMA:CARRTHD Uniprot:A7SU48
        Length = 377

 Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
 Identities = 118/307 (38%), Positives = 175/307 (57%)

Query:    25 VYGLIFLFKW----RPGEK----DDRVVIKDPNPN-LFFASQVINNACATQAILSILLNC 75
             VYG IFLFKW    R   K    D+  V  +   N +FFA QVI N+CAT A+LS+LLNC
Sbjct:    42 VYGFIFLFKWIEERRSRRKIQHIDESFVENEEIVNDIFFAQQVIPNSCATHALLSVLLNC 101

Query:    76 PDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEP-FVPEEQKA--AGK 132
             P ID+G  +SKLK+F+KNF PE KG  I N   +  +HN FARPEP  +PE+  +  + +
Sbjct:   102 PHIDLGENVSKLKDFSKNFNPENKGYVIGNLPELAMSHNKFARPEPKLLPEKTNSISSAR 161

Query:   133 DDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKS 192
               + +HF+SY+P+ G L+ELDGLK  PI  GP   G+ + DW +  + VI ER+   +  
Sbjct:   162 ALEAFHFVSYVPIKGRLFELDGLKPYPIDHGPW--GEQE-DWTEKFRRVITERLGIATGG 218

Query:   193 E----IRFNLMAVIKNRKELYTAELKEFQRKR------ERILQQLASLQSERMVDKTSF- 241
             E    IR+NLMAV+ +R   +  EL++   +       + I  Q   + S  ++   +F 
Sbjct:   219 EPYHDIRYNLMAVVADRVTEFEEELEKLTNESILIVGADHISPQCIYIVS-LLIHVGTFV 277

Query:   242 --EALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQ 299
               + L   L +V   +      +  E++K KK+  ++ RR HNY PF+  FL +LA++  
Sbjct:   278 LPQELALELHDVELRMTTCETALREEKDKRKKYYVDHCRRTHNYDPFICTFLTMLAQEGH 337

Query:   300 LKPLIEK 306
             +  L+E+
Sbjct:   338 MGQLVEQ 344


>UNIPROTKB|Q17N72 [details] [associations]
            symbol:calypso "Ubiquitin carboxyl-terminal hydrolase
            calypso" species:7159 "Aedes aegypti" [GO:0000790 "nuclear
            chromatin" evidence=ISS] [GO:0003682 "chromatin binding"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISS] [GO:0006342 "chromatin silencing" evidence=ISS]
            [GO:0035517 "PR-DUB complex" evidence=ISS] [GO:0035522
            "monoubiquitinated histone H2A deubiquitination" evidence=ISS]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140
            GO:GO:0003682 GO:GO:0000790 GO:GO:0006511 GO:GO:0006342
            GO:GO:0035517 GO:GO:0035522 GO:GO:0004843 GO:GO:0004221 KO:K08588
            Gene3D:3.40.532.10 PANTHER:PTHR10589 eggNOG:NOG249036 EMBL:CH477201
            RefSeq:XP_001651006.1 UniGene:Aae.7505 ProteinModelPortal:Q17N72
            MEROPS:C12.A09 EnsemblMetazoa:AAEL000787-RA GeneID:5566609
            KEGG:aag:AaeL_AAEL000787 VectorBase:AAEL000787 HOGENOM:HOG000203918
            OMA:DKFRRVM OrthoDB:EOG4FN302 PhylomeDB:Q17N72 Uniprot:Q17N72
        Length = 478

 Score = 396 (144.5 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
 Identities = 101/282 (35%), Positives = 153/282 (54%)

Query:     3 VKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKW----RPGEK---DDRVVIKDPNP--NLF 53
             VKGVQV               PVYG IFLF+W    R   K      + +KD     N+F
Sbjct:    31 VKGVQVEEIYDLQKNIEG---PVYGFIFLFRWIEERRARRKIVETTEIYVKDEEAVNNIF 87

Query:    54 FASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAH 113
             FA QV+ N+CAT A+LS+LLNC DID+G  LS+LK  TK   PE KG AI N+  +  AH
Sbjct:    88 FAQQVVPNSCATHALLSVLLNCSDIDLGNTLSRLKVHTKGMCPENKGWAIGNTPELACAH 147

Query:   114 NSFARPEPFVPEEQKAA---GK-DDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
             NS A P+     ++ +    G+   + +HF+S++P++G L+ELDGLK  P+  GP   G+
Sbjct:   148 NSHAMPQARRRMDRNSGVSTGRFTGEAFHFVSFVPINGHLFELDGLKPFPMDHGPW--GE 205

Query:   170 GDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLA 228
              +  W    + V+ +R+     + +IRFNLMAV+ +R+   T +LK  +  +  +   L 
Sbjct:   206 KEA-WTDKFRRVMSDRLGISTGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQTIVSAALE 264

Query:   229 SLQSERMVDKTSFEALNKSLSEVNAGIEGATE--KILMEEEK 268
              L   +  +  S E ++K   E  + ++ ++E  ++L   EK
Sbjct:   265 KLLKSKRTESRSLETVDKIKKEEESPVKLSSEYSQLLEMNEK 306

 Score = 83 (34.3 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
 Identities = 24/66 (36%), Positives = 39/66 (59%)

Query:   243 ALNKSL-SEVNAGIEGATEKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQL 300
             +L K+L SE+N      TE+ L +E EK   ++ ++ RR HNY  F+  FL +LA + +L
Sbjct:   364 SLLKNLESEINI-----TEQHLCDENEKRAMFKVDDCRRTHNYDEFICTFLSMLAHQGEL 418

Query:   301 KPLIEK 306
               L+ +
Sbjct:   419 GDLVSQ 424


>UNIPROTKB|Q52L14 [details] [associations]
            symbol:bap1 "Ubiquitin carboxyl-terminal hydrolase BAP1"
            species:8355 "Xenopus laevis" [GO:0001558 "regulation of cell
            growth" evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=ISS]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0035517 "PR-DUB complex" evidence=ISS] [GO:0035522
            "monoubiquitinated histone H2A deubiquitination" evidence=ISS]
            [GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0071108
            "protein K48-linked deubiquitination" evidence=ISS]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140
            GO:GO:0005737 GO:GO:0001558 GO:GO:0003682 GO:GO:0051726
            GO:GO:0006511 GO:GO:0071108 GO:GO:0035517 GO:GO:0035522
            GO:GO:0004843 GO:GO:0004221 CTD:8314 HOVERGEN:HBG054042 KO:K08588
            Gene3D:3.40.532.10 PANTHER:PTHR10589 EMBL:BC094108
            RefSeq:NP_001089388.1 UniGene:Xl.11445 ProteinModelPortal:Q52L14
            GeneID:734438 KEGG:xla:734438 Xenbase:XB-GENE-866405 Uniprot:Q52L14
        Length = 618

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 109/245 (44%), Positives = 143/245 (58%)

Query:     3 VKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKW----RPGEK-----DDRVVIKDPNPN-L 52
             VKGVQV               PVYG IFLFKW    R   K     DD  V++D   N +
Sbjct:    24 VKGVQVEEIYDLQSKCPG---PVYGFIFLFKWIEERRSRRKVSTLLDDTSVMEDEVVNNM 80

Query:    53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
             FFA Q+I N+CAT A+LS+LLNC  + +GP LS++KEFTK F PE KG AI N+  +  A
Sbjct:    81 FFAHQLIPNSCATHALLSVLLNCGGVHLGPTLSRIKEFTKGFSPESKGYAIGNAPELAKA 140

Query:   113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
             HNS ARPEP  +PE+Q   +A +  + +HF+SY+P+ G L+ELDGLK  PI  GP     
Sbjct:   141 HNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKGRLFELDGLKVYPIDHGPWAE-- 198

Query:   170 GDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQ 225
              D +W    + VI ERI   +  E    IRFNLMAV+ +R+  Y  +L   +  R+ +L+
Sbjct:   199 -DEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRLKYEGKLNILKMNRQTVLE 257

Query:   226 QLASL 230
              L  L
Sbjct:   258 ALQQL 262


>WB|WBGene00006724 [details] [associations]
            symbol:ubh-4 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008242 "omega peptidase activity" evidence=IEA] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] [GO:0008340 "determination of adult
            lifespan" evidence=IMP] InterPro:IPR001578 InterPro:IPR017390
            Pfam:PF01088 PIRSF:PIRSF038120 PRINTS:PR00707 PROSITE:PS00140
            GO:GO:0008340 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
            GO:GO:0008234 GO:GO:0005622 GO:GO:0006511 EMBL:Z46676 GO:GO:0008242
            GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589
            GeneTree:ENSGT00510000046560 HOGENOM:HOG000203918 PIR:T19070
            RefSeq:NP_495684.2 ProteinModelPortal:Q09444 SMR:Q09444
            DIP:DIP-26660N IntAct:Q09444 MINT:MINT-1058911 STRING:Q09444
            MEROPS:C12.005 PaxDb:Q09444 EnsemblMetazoa:C08B11.7 GeneID:174289
            KEGG:cel:CELE_C08B11.7 UCSC:C08B11.7 CTD:174289 WormBase:C08B11.7
            eggNOG:NOG321645 InParanoid:Q09444 KO:K05610 OMA:QMFEFDT
            NextBio:883384 Uniprot:Q09444
        Length = 321

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 89/212 (41%), Positives = 134/212 (63%)

Query:    23 RPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDI-- 80
             RP YGLIFLFKWR G  D+   I     N+FFA Q I NACATQA++++L+N  D D+  
Sbjct:    45 RPTYGLIFLFKWRQG--DETTGIPSDKQNIFFAHQTIQNACATQALINLLMNVEDTDVKL 102

Query:    81 GPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFI 140
             G  L++ KEF  +  P  +G  ++NS+ IR  HNSF+R   F  E     G+ +D YHF+
Sbjct:   103 GNILNQYKEFAIDLDPNTRGHCLSNSEEIRTVHNSFSRQTLF--ELDIKGGESEDNYHFV 160

Query:   141 SYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMA 200
             +Y+P+   +YELDGL+E P+ +      Q + DW++ ++PVIQ+R+++YS+ EI FNLMA
Sbjct:   161 TYVPIGNKVYELDGLRELPLEVAEF---QKEQDWIEAIKPVIQQRMQKYSEGEITFNLMA 217

Query:   201 VIKNRKELYTAELKEFQRKRER--ILQQLASL 230
             ++ NRK+     ++   +  E   + +Q+A L
Sbjct:   218 LVPNRKQKLQEMMENLIQANENNELEEQIADL 249

 Score = 116 (45.9 bits), Expect = 0.00026, P = 0.00026
 Identities = 34/120 (28%), Positives = 58/120 (48%)

Query:   201 VIKNRKELY-----TAELKEFQRKRERILQQLASLQSERMVDKTSFEALNKSLSEVNAGI 255
             VI+ R + Y     T  L      R++ LQ++     E ++       L + ++++N  I
Sbjct:   198 VIQQRMQKYSEGEITFNLMALVPNRKQKLQEMM----ENLIQANENNELEEQIADLNKAI 253

Query:   256 EGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSSSS 315
                      E+ K + +R EN RR+HNY PF+   +KILA++ +L  L++ A Q     S
Sbjct:   254 AD-------EDYKMEMYRKENNRRRHNYTPFVIELMKILAKEGKLVGLVDNAYQAAKEKS 306


>ASPGD|ASPL0000055764 [details] [associations]
            symbol:AN0927 species:162425 "Emericella nidulans"
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=IEA]
            [GO:0000502 "proteasome complex" evidence=IEA] [GO:0034399 "nuclear
            periphery" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] InterPro:IPR001578 InterPro:IPR017390
            Pfam:PF01088 PIRSF:PIRSF038120 PRINTS:PR00707 EMBL:BN001308
            GO:GO:0000502 GO:GO:0006511 GO:GO:0008242 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 EMBL:AACD01000014
            HOGENOM:HOG000203918 eggNOG:NOG321645 KO:K05610 MEROPS:C12.009
            OMA:DESEMET OrthoDB:EOG4VT96P RefSeq:XP_658531.1
            ProteinModelPortal:Q5BEV3 STRING:Q5BEV3
            EnsemblFungi:CADANIAT00001728 GeneID:2876706 KEGG:ani:AN0927.2
            Uniprot:Q5BEV3
        Length = 337

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 106/247 (42%), Positives = 147/247 (59%)

Query:    47 DPN---PNLFFASQVINNACATQAILSILLN----CPD-----IDIGPELSKLKEFTKNF 94
             DP+   P+ FFA+Q I NAC TQAILS+LLN     P+     I +GPELS  K+FT  F
Sbjct:    97 DPSTLPPSFFFANQTIQNACGTQAILSVLLNHDTPSPENNNDPITLGPELSSFKDFTTGF 156

Query:    95 PPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDD--DVYHFISYIPVDGVLYEL 152
             P +L+G A++NS+AIR AHN+FAR  PFV E  +   +D+  DVYHFI+Y PV+G LYEL
Sbjct:   157 PSDLRGEALSNSEAIRTAHNAFARASPFVDETVRPRDEDEEGDVYHFIAYTPVNGTLYEL 216

Query:   153 DGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAE 212
             DGL+  PIS GPC        + + V  V+Q+RI RY ++E RFNLMAV+K+ + +  AE
Sbjct:   217 DGLQASPISHGPCDASI----FPEKVIEVLQKRIARYPETETRFNLMAVVKDLR-IRAAE 271

Query:   213 LKEFQRKRERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEEKFKKW 272
             + + Q       ++ A    E  + +++F      + EV  G+    E+    EE  K+ 
Sbjct:   272 MGD-QEALNTEERKRAGWAWENSLRRSNFVGF---IGEVLKGVTKVKEEEGSVEEWVKRA 327

Query:   273 RTENIRR 279
               E  RR
Sbjct:   328 EAETARR 334

 Score = 122 (48.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
 Identities = 34/81 (41%), Positives = 40/81 (49%)

Query:     3 VKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRVVIK------DPN---PNLF 53
             VKGVQ                 VYG+IFLFK+     D            DP+   P+ F
Sbjct:    47 VKGVQFEELISLDPDTIRSLGTVYGVIFLFKYLRQTPDINTSSSADGTPTDPSTLPPSFF 106

Query:    54 FASQVINNACATQAILSILLN 74
             FA+Q I NAC TQAILS+LLN
Sbjct:   107 FANQTIQNACGTQAILSVLLN 127

 Score = 72 (30.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
 Identities = 23/88 (26%), Positives = 42/88 (47%)

Query:   221 ERILQQLASLQSERMVDKTSFE--ALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIR 278
             E++++ L    +     +T F   A+ K L  + A   G  E +  EE K   W  EN  
Sbjct:   236 EKVIEVLQKRIARYPETETRFNLMAVVKDL-RIRAAEMGDQEALNTEERKRAGWAWENSL 294

Query:   279 RKHNYIPFLFNFLKILAEKKQLKPLIEK 306
             R+ N++ F+   LK + + K+ +  +E+
Sbjct:   295 RRSNFVGFIGEVLKGVTKVKEEEGSVEE 322


>UNIPROTKB|B3MIV9 [details] [associations]
            symbol:calypso "Ubiquitin carboxyl-terminal hydrolase
            calypso" species:7217 "Drosophila ananassae" [GO:0000790 "nuclear
            chromatin" evidence=ISS] [GO:0003682 "chromatin binding"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISS] [GO:0006342 "chromatin silencing" evidence=ISS]
            [GO:0035517 "PR-DUB complex" evidence=ISS] [GO:0035522
            "monoubiquitinated histone H2A deubiquitination" evidence=ISS]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140
            GO:GO:0003682 GO:GO:0000790 GO:GO:0006511 GO:GO:0006342
            EMBL:CH902619 GO:GO:0035517 GO:GO:0035522 GO:GO:0004843
            GO:GO:0004221 KO:K08588 Gene3D:3.40.532.10 PANTHER:PTHR10589
            eggNOG:NOG249036 MEROPS:C12.A09 OrthoDB:EOG4FN302
            RefSeq:XP_001959197.1 EnsemblMetazoa:FBtr0117463 GeneID:6495610
            KEGG:dan:Dana_GF12763 FlyBase:FBgn0089797 InParanoid:B3MIV9
            Uniprot:B3MIV9
        Length = 470

 Score = 350 (128.3 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
 Identities = 82/207 (39%), Positives = 120/207 (57%)

Query:    26 YGLIFLFKWRPGEKDDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNC 75
             YG IFLF+W    +  R        + +KD     ++FFA QV+ N+CAT A+LS+LLNC
Sbjct:    82 YGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNC 141

Query:    76 PD--IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKD 133
              +  + +G  LS+LK  TK   PE KGLAI N+  +  AHNS A P+     E+  AG  
Sbjct:   142 NENNLQLGDTLSRLKAHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVS 201

Query:   134 D-----DVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE- 187
                   + +HF+S++P++G L+ELDGLK  P++ G   G +   DW    + V+ ER+  
Sbjct:   202 SCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG---GWEDHEDWTDKFRRVMTERLGI 258

Query:   188 RYSKSEIRFNLMAVIKNRKELYTAELK 214
                + +IRFNLMAV+ +R+   T +LK
Sbjct:   259 ATGEQDIRFNLMAVVPDRRIAITHKLK 285

 Score = 73 (30.8 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
 Identities = 19/74 (25%), Positives = 38/74 (51%)

Query:   235 MVDKTSFEA--LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLK 292
             +++ ++F A  L   L  ++  I    + +  E ++  K++ +  RR HNY  F+  FL 
Sbjct:   324 LLEPSAFTARDLQSLLKNLDTEIAINEQHLADENDRRHKFKVDASRRTHNYDKFICTFLS 383

Query:   293 ILAEKKQLKPLIEK 306
             +LA +  L  L+ +
Sbjct:   384 MLAHQGVLGELVSQ 397


>FB|FBgn0262166 [details] [associations]
            symbol:calypso "calypso" species:7227 "Drosophila
            melanogaster" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IMP;NAS] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0007385 "specification of
            segmental identity, abdomen" evidence=IMP] [GO:0003682 "chromatin
            binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IDA]
            [GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0035522
            "monoubiquitinated histone H2A deubiquitination" evidence=IDA]
            [GO:0006342 "chromatin silencing" evidence=IMP] [GO:0035517 "PR-DUB
            complex" evidence=IPI] InterPro:IPR001578 Pfam:PF01088
            PRINTS:PR00707 PROSITE:PS00140 EMBL:AE013599 GO:GO:0003682
            GO:GO:0007385 GO:GO:0000790 GO:GO:0006511 GO:GO:0006342
            GO:GO:0035517 GO:GO:0035522 GO:GO:0004843 GO:GO:0004221 KO:K08588
            Gene3D:3.40.532.10 PANTHER:PTHR10589 eggNOG:NOG249036
            GeneTree:ENSGT00510000046560 MEROPS:C12.A09 OMA:DKFRRVM
            OrthoDB:EOG4FN302 EMBL:AY047515 RefSeq:NP_611096.1
            RefSeq:NP_788374.1 UniGene:Dm.19939 HSSP:P15374
            ProteinModelPortal:Q7K5N4 SMR:Q7K5N4 DIP:DIP-59274N PaxDb:Q7K5N4
            PRIDE:Q7K5N4 EnsemblMetazoa:FBtr0087245 EnsemblMetazoa:FBtr0087246
            GeneID:36794 KEGG:dme:Dmel_CG8445 UCSC:CG8445-RA CTD:36794
            FlyBase:FBgn0262166 InParanoid:Q7K5N4 PhylomeDB:Q7K5N4
            GenomeRNAi:36794 NextBio:800424 Bgee:Q7K5N4 Uniprot:Q7K5N4
        Length = 471

 Score = 351 (128.6 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
 Identities = 82/207 (39%), Positives = 120/207 (57%)

Query:    26 YGLIFLFKWRPGEKDDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNC 75
             YG IFLF+W    +  R        + +KD     ++FFA QV+ N+CAT A+LS+LLNC
Sbjct:    84 YGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNC 143

Query:    76 PD--IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKD 133
              +  + +G  LS+LK  TK   PE KGLAI N+  +  AHNS A P+     E+  AG  
Sbjct:   144 NENNLQLGDTLSRLKTHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVS 203

Query:   134 D-----DVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE- 187
                   + +HF+S++P++G L+ELDGLK  P++ G   G +   DW    + V+ ER+  
Sbjct:   204 SCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG---GWEDSEDWTDKFRRVMAERLGI 260

Query:   188 RYSKSEIRFNLMAVIKNRKELYTAELK 214
                + +IRFNLMAV+ +R+   T +LK
Sbjct:   261 ATGEQDIRFNLMAVVPDRRIAITHKLK 287

 Score = 67 (28.6 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
 Identities = 18/74 (24%), Positives = 37/74 (50%)

Query:   235 MVDKTSFEA--LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLK 292
             +++ ++F A  L   L  ++  I    + +  E ++   ++ +  RR HNY  F+  FL 
Sbjct:   326 LLEPSAFTARDLQSLLKNLDTEIAINEQHLADENDRRHMFKVDASRRTHNYDKFICTFLS 385

Query:   293 ILAEKKQLKPLIEK 306
             +LA +  L  L+ +
Sbjct:   386 MLAHQGVLGELVSQ 399


>UNIPROTKB|B4HST0 [details] [associations]
            symbol:calypso "Ubiquitin carboxyl-terminal hydrolase
            calypso" species:7238 "Drosophila sechellia" [GO:0000790 "nuclear
            chromatin" evidence=ISS] [GO:0003682 "chromatin binding"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISS] [GO:0006342 "chromatin silencing" evidence=ISS]
            [GO:0035517 "PR-DUB complex" evidence=ISS] [GO:0035522
            "monoubiquitinated histone H2A deubiquitination" evidence=ISS]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140
            GO:GO:0003682 GO:GO:0000790 GO:GO:0006511 GO:GO:0006342
            EMBL:CH480816 GO:GO:0035517 GO:GO:0035522 GO:GO:0004843
            GO:GO:0004221 KO:K08588 Gene3D:3.40.532.10 PANTHER:PTHR10589
            MEROPS:C12.A09 OrthoDB:EOG4FN302 RefSeq:XP_002034081.1
            EnsemblMetazoa:FBtr0203068 GeneID:6609392 KEGG:dse:Dsec_GM20083
            FlyBase:FBgn0174966 Uniprot:B4HST0
        Length = 471

 Score = 351 (128.6 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
 Identities = 82/207 (39%), Positives = 120/207 (57%)

Query:    26 YGLIFLFKWRPGEKDDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNC 75
             YG IFLF+W    +  R        + +KD     ++FFA QV+ N+CAT A+LS+LLNC
Sbjct:    84 YGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNC 143

Query:    76 PD--IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKD 133
              +  + +G  LS+LK  TK   PE KGLAI N+  +  AHNS A P+     E+  AG  
Sbjct:   144 NENNLQLGDTLSRLKTHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVS 203

Query:   134 D-----DVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE- 187
                   + +HF+S++P++G L+ELDGLK  P++ G   G +   DW    + V+ ER+  
Sbjct:   204 SCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG---GWEDSEDWTDKFRRVMAERLGI 260

Query:   188 RYSKSEIRFNLMAVIKNRKELYTAELK 214
                + +IRFNLMAV+ +R+   T +LK
Sbjct:   261 ATGEQDIRFNLMAVVPDRRIAITHKLK 287

 Score = 67 (28.6 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
 Identities = 18/74 (24%), Positives = 37/74 (50%)

Query:   235 MVDKTSFEA--LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLK 292
             +++ ++F A  L   L  ++  I    + +  E ++   ++ +  RR HNY  F+  FL 
Sbjct:   326 LLEPSAFTARDLQSLLKNLDTEIAINEQHLTDENDRRHMFKVDASRRTHNYDKFICTFLS 385

Query:   293 ILAEKKQLKPLIEK 306
             +LA +  L  L+ +
Sbjct:   386 MLAHQGVLGELVSQ 399


>UNIPROTKB|B4P6P6 [details] [associations]
            symbol:calypso "Ubiquitin carboxyl-terminal hydrolase
            calypso" species:7245 "Drosophila yakuba" [GO:0000790 "nuclear
            chromatin" evidence=ISS] [GO:0003682 "chromatin binding"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISS] [GO:0006342 "chromatin silencing" evidence=ISS]
            [GO:0035517 "PR-DUB complex" evidence=ISS] [GO:0035522
            "monoubiquitinated histone H2A deubiquitination" evidence=ISS]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140
            GO:GO:0003682 GO:GO:0000790 GO:GO:0006511 GO:GO:0006342
            EMBL:CM000158 GO:GO:0035517 GO:GO:0035522 GO:GO:0004843
            GO:GO:0004221 KO:K08588 Gene3D:3.40.532.10 PANTHER:PTHR10589
            eggNOG:NOG249036 MEROPS:C12.A09 OrthoDB:EOG4FN302
            RefSeq:XP_002092261.1 EnsemblMetazoa:FBtr0260609 GeneID:6531462
            KEGG:dya:Dyak_GE14091 FlyBase:FBgn0231717 Uniprot:B4P6P6
        Length = 471

 Score = 351 (128.6 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
 Identities = 82/207 (39%), Positives = 120/207 (57%)

Query:    26 YGLIFLFKWRPGEKDDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNC 75
             YG IFLF+W    +  R        + +KD     ++FFA QV+ N+CAT A+LS+LLNC
Sbjct:    84 YGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNC 143

Query:    76 PD--IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKD 133
              +  + +G  LS+LK  TK   PE KGLAI N+  +  AHNS A P+     E+  AG  
Sbjct:   144 NENNLQLGDTLSRLKAHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVS 203

Query:   134 D-----DVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE- 187
                   + +HF+S++P++G L+ELDGLK  P++ G   G +   DW    + V+ ER+  
Sbjct:   204 SCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG---GWEDSEDWTDKFRRVMAERLGI 260

Query:   188 RYSKSEIRFNLMAVIKNRKELYTAELK 214
                + +IRFNLMAV+ +R+   T +LK
Sbjct:   261 ATGEQDIRFNLMAVVPDRRIAITHKLK 287

 Score = 67 (28.6 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
 Identities = 18/74 (24%), Positives = 37/74 (50%)

Query:   235 MVDKTSFEA--LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLK 292
             +++ ++F A  L   L  ++  I    + +  E ++   ++ +  RR HNY  F+  FL 
Sbjct:   326 LLEPSAFTARDLQSLLKNLDTEIAINEQHLADENDRRHMFKVDASRRTHNYDKFICTFLS 385

Query:   293 ILAEKKQLKPLIEK 306
             +LA +  L  L+ +
Sbjct:   386 MLAHQGVLGELVSQ 399


>UNIPROTKB|B4QHH0 [details] [associations]
            symbol:calypso "Ubiquitin carboxyl-terminal hydrolase
            calypso" species:7240 "Drosophila simulans" [GO:0000790 "nuclear
            chromatin" evidence=ISS] [GO:0003682 "chromatin binding"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISS] [GO:0006342 "chromatin silencing" evidence=ISS]
            [GO:0035517 "PR-DUB complex" evidence=ISS] [GO:0035522
            "monoubiquitinated histone H2A deubiquitination" evidence=ISS]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140
            GO:GO:0003682 GO:GO:0000790 GO:GO:0006511 GO:GO:0006342
            EMBL:CM000362 GO:GO:0035517 GO:GO:0035522 GO:GO:0004843
            GO:GO:0004221 KO:K08588 Gene3D:3.40.532.10 PANTHER:PTHR10589
            MEROPS:C12.A09 OrthoDB:EOG4FN302 RefSeq:XP_002081730.1
            EnsemblMetazoa:FBtr0225471 GeneID:6734723 KEGG:dsi:Dsim_GD25561
            FlyBase:FBgn0196847 Uniprot:B4QHH0
        Length = 471

 Score = 351 (128.6 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
 Identities = 82/207 (39%), Positives = 120/207 (57%)

Query:    26 YGLIFLFKWRPGEKDDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNC 75
             YG IFLF+W    +  R        + +KD     ++FFA QV+ N+CAT A+LS+LLNC
Sbjct:    84 YGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNC 143

Query:    76 PD--IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKD 133
              +  + +G  LS+LK  TK   PE KGLAI N+  +  AHNS A P+     E+  AG  
Sbjct:   144 NENNLQLGDTLSRLKTHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVS 203

Query:   134 D-----DVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE- 187
                   + +HF+S++P++G L+ELDGLK  P++ G   G +   DW    + V+ ER+  
Sbjct:   204 SCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG---GWEDSEDWTDKFRRVMAERLGI 260

Query:   188 RYSKSEIRFNLMAVIKNRKELYTAELK 214
                + +IRFNLMAV+ +R+   T +LK
Sbjct:   261 ATGEQDIRFNLMAVVPDRRIAITHKLK 287

 Score = 67 (28.6 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
 Identities = 18/74 (24%), Positives = 37/74 (50%)

Query:   235 MVDKTSFEA--LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLK 292
             +++ ++F A  L   L  ++  I    + +  E ++   ++ +  RR HNY  F+  FL 
Sbjct:   326 LLEPSAFTARDLQSLLKNLDTEIAINEQHLADENDRRHMFKVDASRRTHNYDKFICTFLS 385

Query:   293 ILAEKKQLKPLIEK 306
             +LA +  L  L+ +
Sbjct:   386 MLAHQGVLGELVSQ 399


>UNIPROTKB|B3NPV7 [details] [associations]
            symbol:calypso "Ubiquitin carboxyl-terminal hydrolase
            calypso" species:7220 "Drosophila erecta" [GO:0000790 "nuclear
            chromatin" evidence=ISS] [GO:0003682 "chromatin binding"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISS] [GO:0006342 "chromatin silencing" evidence=ISS]
            [GO:0035517 "PR-DUB complex" evidence=ISS] [GO:0035522
            "monoubiquitinated histone H2A deubiquitination" evidence=ISS]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140
            GO:GO:0003682 GO:GO:0000790 GO:GO:0006511 GO:GO:0006342
            EMBL:CH954179 GO:GO:0035517 GO:GO:0035522 GO:GO:0004843
            GO:GO:0004221 KO:K08588 Gene3D:3.40.532.10 PANTHER:PTHR10589
            MEROPS:C12.A09 OrthoDB:EOG4FN302 RefSeq:XP_001975404.1
            EnsemblMetazoa:FBtr0142348 GeneID:6548522 KEGG:der:Dere_GG22294
            FlyBase:FBgn0114466 Uniprot:B3NPV7
        Length = 471

 Score = 350 (128.3 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
 Identities = 82/207 (39%), Positives = 120/207 (57%)

Query:    26 YGLIFLFKWRPGEKDDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNC 75
             YG IFLF+W    +  R        + +KD     ++FFA QV+ N+CAT A+LS+LLNC
Sbjct:    84 YGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNC 143

Query:    76 PD--IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKD 133
              +  + +G  LS+LK  TK   PE KGLAI N+  +  AHNS A P+     E+  AG  
Sbjct:   144 NENNLQLGDTLSRLKVHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVS 203

Query:   134 D-----DVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE- 187
                   + +HF+S++P++G L+ELDGLK  P++ G   G +   DW    + V+ ER+  
Sbjct:   204 SCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG---GWEDSEDWTDKFRRVMAERLGI 260

Query:   188 RYSKSEIRFNLMAVIKNRKELYTAELK 214
                + +IRFNLMAV+ +R+   T +LK
Sbjct:   261 ATGEQDIRFNLMAVVPDRRIAITHKLK 287

 Score = 67 (28.6 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
 Identities = 18/74 (24%), Positives = 37/74 (50%)

Query:   235 MVDKTSFEA--LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLK 292
             +++ ++F A  L   L  ++  I    + +  E ++   ++ +  RR HNY  F+  FL 
Sbjct:   326 LLEPSAFTARDLQSLLKNLDTEIAINEQHLADENDRRHMFKVDASRRTHNYDKFICTFLS 385

Query:   293 ILAEKKQLKPLIEK 306
             +LA +  L  L+ +
Sbjct:   386 MLAHQGVLGELVSQ 399


>UNIPROTKB|B4GAM2 [details] [associations]
            symbol:calypso "Ubiquitin carboxyl-terminal hydrolase
            calypso" species:7234 "Drosophila persimilis" [GO:0000790 "nuclear
            chromatin" evidence=ISS] [GO:0003682 "chromatin binding"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISS] [GO:0006342 "chromatin silencing" evidence=ISS]
            [GO:0035517 "PR-DUB complex" evidence=ISS] [GO:0035522
            "monoubiquitinated histone H2A deubiquitination" evidence=ISS]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140
            GO:GO:0003682 GO:GO:0000790 GO:GO:0006511 GO:GO:0006342
            EMBL:CH479181 GO:GO:0035517 GO:GO:0035522 GO:GO:0004843
            GO:GO:0004221 KO:K08588 Gene3D:3.40.532.10 PANTHER:PTHR10589
            MEROPS:C12.A09 OrthoDB:EOG4FN302 RefSeq:XP_002016084.1
            ProteinModelPortal:B4GAM2 EnsemblMetazoa:FBtr0176299 GeneID:6590516
            KEGG:dpe:Dper_GL10684 FlyBase:FBgn0148294 Uniprot:B4GAM2
        Length = 475

 Score = 344 (126.2 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
 Identities = 82/207 (39%), Positives = 119/207 (57%)

Query:    26 YGLIFLFKWRPGEKDDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNC 75
             YG IFLF+W    +  R        + +KD     ++FFA QV+ N+CAT A+LS+LLNC
Sbjct:    83 YGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNC 142

Query:    76 PD--IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKD 133
              +  + +G  LS+LK  TK   PE KGLAI N+  +  AHNS A P+     E+  AG  
Sbjct:   143 NENNLQLGDTLSRLKVHTKGMSPENKGLAIGNTPELACAHNSHAIPQARRRLERTGAGVA 202

Query:   134 D-----DVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE- 187
                   + +HF+S++P+ G L+ELDGLK  P++ G   G +   DW    + V+ ER+  
Sbjct:   203 SCRFTGEAFHFVSFVPISGQLFELDGLKPYPMNHG---GWEDHEDWTDKFRRVMAERLGI 259

Query:   188 RYSKSEIRFNLMAVIKNRKELYTAELK 214
                + +IRFNLMAV+ +R+   T +LK
Sbjct:   260 ATGEQDIRFNLMAVVPDRRIAITHKLK 286

 Score = 69 (29.3 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
 Identities = 21/74 (28%), Positives = 39/74 (52%)

Query:   235 MVDKTSFEALNKSLSEVNAGIEGA-TEKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLK 292
             +++ ++F A +  L   N   E A  E+ L +E ++   ++ +  RR HNY  F+  FL 
Sbjct:   325 LLEPSAFTAKDLQLLLKNLDTEIAINEQNLADENDRRHMFKVDASRRTHNYDKFICTFLS 384

Query:   293 ILAEKKQLKPLIEK 306
             +LA +  L  L+ +
Sbjct:   385 MLAHQGVLGELVSQ 398


>UNIPROTKB|Q291J4 [details] [associations]
            symbol:calypso "Ubiquitin carboxyl-terminal hydrolase
            calypso" species:46245 "Drosophila pseudoobscura pseudoobscura"
            [GO:0000790 "nuclear chromatin" evidence=ISS] [GO:0003682
            "chromatin binding" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0006342
            "chromatin silencing" evidence=ISS] [GO:0035517 "PR-DUB complex"
            evidence=ISS] [GO:0035522 "monoubiquitinated histone H2A
            deubiquitination" evidence=ISS] InterPro:IPR001578 Pfam:PF01088
            PRINTS:PR00707 PROSITE:PS00140 GO:GO:0003682 GO:GO:0000790
            GO:GO:0006511 GO:GO:0006342 EMBL:CM000071 GenomeReviews:CM000071_GR
            GO:GO:0035517 GO:GO:0035522 GO:GO:0004843 GO:GO:0004221 KO:K08588
            Gene3D:3.40.532.10 PANTHER:PTHR10589 eggNOG:NOG249036
            MEROPS:C12.A09 OMA:DKFRRVM OrthoDB:EOG4FN302 RefSeq:XP_001360543.1
            ProteinModelPortal:Q291J4 GeneID:4803898 KEGG:dpo:Dpse_GA21084
            FlyBase:FBgn0081072 InParanoid:Q291J4 Uniprot:Q291J4
        Length = 475

 Score = 344 (126.2 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
 Identities = 82/207 (39%), Positives = 119/207 (57%)

Query:    26 YGLIFLFKWRPGEKDDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNC 75
             YG IFLF+W    +  R        + +KD     ++FFA QV+ N+CAT A+LS+LLNC
Sbjct:    83 YGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNC 142

Query:    76 PD--IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKD 133
              +  + +G  LS+LK  TK   PE KGLAI N+  +  AHNS A P+     E+  AG  
Sbjct:   143 NENNLQLGDTLSRLKVHTKGMSPENKGLAIGNTPELACAHNSHAIPQARRRLERTGAGVA 202

Query:   134 D-----DVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE- 187
                   + +HF+S++P+ G L+ELDGLK  P++ G   G +   DW    + V+ ER+  
Sbjct:   203 SCRFTGEAFHFVSFVPISGQLFELDGLKPYPMNHG---GWEDHEDWTDKFRRVMAERLGI 259

Query:   188 RYSKSEIRFNLMAVIKNRKELYTAELK 214
                + +IRFNLMAV+ +R+   T +LK
Sbjct:   260 ATGEQDIRFNLMAVVPDRRIAITHKLK 286

 Score = 69 (29.3 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
 Identities = 21/74 (28%), Positives = 39/74 (52%)

Query:   235 MVDKTSFEALNKSLSEVNAGIEGA-TEKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLK 292
             +++ ++F A +  L   N   E A  E+ L +E ++   ++ +  RR HNY  F+  FL 
Sbjct:   325 LLEPSAFTAKDLQLLLKNLDTEIAINEQNLADENDRRHMFKVDASRRTHNYDKFICTFLS 384

Query:   293 ILAEKKQLKPLIEK 306
             +LA +  L  L+ +
Sbjct:   385 MLAHQGVLGELVSQ 398


>UNIPROTKB|B0W2R4 [details] [associations]
            symbol:calypso "Ubiquitin carboxyl-terminal hydrolase
            calypso" species:7176 "Culex quinquefasciatus" [GO:0000790 "nuclear
            chromatin" evidence=ISS] [GO:0003682 "chromatin binding"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISS] [GO:0006342 "chromatin silencing" evidence=ISS]
            [GO:0035517 "PR-DUB complex" evidence=ISS] [GO:0035522
            "monoubiquitinated histone H2A deubiquitination" evidence=ISS]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140
            GO:GO:0003682 GO:GO:0000790 GO:GO:0006511 GO:GO:0006342
            GO:GO:0035517 GO:GO:0035522 GO:GO:0004843 GO:GO:0004221 KO:K08588
            Gene3D:3.40.532.10 PANTHER:PTHR10589 eggNOG:NOG249036
            MEROPS:C12.A09 HOGENOM:HOG000203918 OMA:DKFRRVM OrthoDB:EOG4FN302
            EMBL:DS231828 RefSeq:XP_001842998.1 UniGene:Cpi.8966
            ProteinModelPortal:B0W2R4 EnsemblMetazoa:CPIJ001439-RA
            GeneID:6032393 KEGG:cqu:CpipJ_CPIJ001439 VectorBase:CPIJ001439
            PhylomeDB:B0W2R4 Uniprot:B0W2R4
        Length = 470

 Score = 329 (120.9 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
 Identities = 84/255 (32%), Positives = 136/255 (53%)

Query:     3 VKGVQVXXXXXXXXXXXXXXRPVYGLIFLFKWRPGEKDDRVVI--------KDPNP--NL 52
             VKGVQV               PV+G IFLF+W    +  R ++        KD     ++
Sbjct:    31 VKGVQVEEIYDLQKTIEG---PVFGFIFLFRWIEERRARRKIVETTTEMYVKDEEAVNSI 87

Query:    53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
             FFA QV+ N+CAT A+LS+LLNC DID+G  LS+LK  TK   P+ KG AI N+  +  A
Sbjct:    88 FFAHQVVPNSCATHALLSVLLNCSDIDLGTTLSRLKVHTKGMCPDNKGWAIGNTPELACA 147

Query:   113 HNSFARPEPFVPEEQKAA---GK-DDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGG 168
             HNS A P+     ++ +    G+   + +HF+S+ P++G L+ELDGLK  P+  GP   G
Sbjct:   148 HNSHAMPQARRRMDRNSGVSTGRFTGEAFHFVSFCPINGHLFELDGLKPFPMDHGPW--G 205

Query:   169 QGDMDWLQMVQPVIQERIERYSKSEIRF-NLMAVIKNRKELYTAELKEFQRKRERILQQL 227
             + + DW    + V+ +R+   +   I   + + +++  + + +A L++  + ++  L+  
Sbjct:   206 EKE-DWTDKFRRVMSDRLGISTDRRIAITHKLKMLRTNQTIVSAALEKLLKSKQ--LESR 262

Query:   228 ASLQSERMVDKTSFE 242
             +  +    VDK   E
Sbjct:   263 SQAEIRETVDKIKKE 277

 Score = 80 (33.2 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
 Identities = 24/64 (37%), Positives = 38/64 (59%)

Query:   243 ALNKSL-SEVNAGIEGATEKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQL 300
             +L K+L SE+N      TE+ L +E EK   ++ ++ RR HNY  F+  FL +LA + +L
Sbjct:   356 SLLKNLESEINI-----TEQHLCDENEKRAMFKVDDCRRTHNYDEFICTFLSMLAYQGEL 410

Query:   301 KPLI 304
               L+
Sbjct:   411 GDLV 414


>UNIPROTKB|H0Y6Y4 [details] [associations]
            symbol:UCHL5 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L5" species:9606 "Homo sapiens" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] InterPro:IPR001578 Pfam:PF01088 GO:GO:0005634
            GO:GO:0005737 GO:GO:0006511 GO:GO:0004221 Gene3D:3.40.532.10
            PANTHER:PTHR10589 EMBL:AL136370 HGNC:HGNC:19678 ChiTaRS:UCHL5
            ProteinModelPortal:H0Y6Y4 PRIDE:H0Y6Y4 Ensembl:ENST00000420791
            Bgee:H0Y6Y4 Uniprot:H0Y6Y4
        Length = 218

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 70/136 (51%), Positives = 101/136 (74%)

Query:    84 LSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYI 143
             LS+ KEF+++F   +KGLA++NSD IR  HNSFAR + F   + K + K++D +HF+SY+
Sbjct:     2 LSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQMF-EFDTKTSAKEEDAFHFVSYV 60

Query:   144 PVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 203
             PV+G LYELDGL+EGPI LG C       DW+  V+PVI++RI++YS+ EIRFNLMA++ 
Sbjct:    61 PVNGRLYELDGLREGPIDLGACNQD----DWISAVRPVIEKRIQKYSEGEIRFNLMAIVS 116

Query:   204 NRKELYTAELKEFQRK 219
             +RK +Y  ++ E QR+
Sbjct:   117 DRKMIYEQKIAELQRQ 132

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 65/147 (44%), Positives = 92/147 (62%)

Query:   163 GPCT-GGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRE 221
             GP   G     DW+  V+PVI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR   
Sbjct:    75 GPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR--- 131

Query:   222 RILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRR 279
                 QLA    E  +D    +  N  LS + +  E A  ++L+EEE  K K+++ ENIRR
Sbjct:   132 ----QLAE---EEPMDT---DQGNSMLSAIQS--EVAKNQMLIEEEVQKLKRYKIENIRR 179

Query:   280 KHNYIPFLFNFLKILAEKKQLKPLIEK 306
             KHNY+PF+   LK LAE +QL PL+EK
Sbjct:   180 KHNYLPFIMELLKTLAEHQQLIPLVEK 206


>UNIPROTKB|B4DW59 [details] [associations]
            symbol:UCHL5 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L5" species:9606 "Homo sapiens" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001578 Pfam:PF01088
            GO:GO:0005622 GO:GO:0006511 GO:GO:0004221 Gene3D:3.40.532.10
            PANTHER:PTHR10589 HOGENOM:HOG000203918 EMBL:AL136370
            HOVERGEN:HBG056021 IPI:IPI00219512 UniGene:Hs.145469
            HGNC:HGNC:19678 ChiTaRS:UCHL5 EMBL:AK301381 SMR:B4DW59
            STRING:B4DW59 Ensembl:ENST00000367452 UCSC:uc010pow.1
            Uniprot:B4DW59
        Length = 192

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 71/154 (46%), Positives = 103/154 (66%)

Query:    98 LKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKE 157
             +KGLA++NSD IR  HNSFAR + F   + K + K++D +HF+SY+PV+G LYELDGL+E
Sbjct:     1 MKGLALSNSDVIRQVHNSFARQQMF-EFDTKTSAKEEDAFHFVSYVPVNGRLYELDGLRE 59

Query:   158 GPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQ 217
             GPI LG C       DW+  V+PVI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E Q
Sbjct:    60 GPIDLGACNQD----DWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQ 115

Query:   218 RKRERILQQLASLQSERMVDKTSFE-ALNKSLSE 250
             R+     + + + Q   M+     E A N+ L E
Sbjct:   116 RQLAE--EPMDTDQGNSMLSAIQSEVAKNQMLIE 147

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 65/147 (44%), Positives = 92/147 (62%)

Query:   163 GPCT-GGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRE 221
             GP   G     DW+  V+PVI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR   
Sbjct:    60 GPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR--- 116

Query:   222 RILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRR 279
                 QLA    E  +D    +  N  LS + +  E A  ++L+EEE  K K+++ ENIRR
Sbjct:   117 ----QLA----EEPMDT---DQGNSMLSAIQS--EVAKNQMLIEEEVQKLKRYKIENIRR 163

Query:   280 KHNYIPFLFNFLKILAEKKQLKPLIEK 306
             KHNY+PF+   LK LAE +QL PL+EK
Sbjct:   164 KHNYLPFIMELLKTLAEHQQLIPLVEK 190


>UNIPROTKB|B7Z9U9 [details] [associations]
            symbol:UCHL5 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L5" species:9606 "Homo sapiens" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001578 Pfam:PF01088
            GO:GO:0005622 GO:GO:0006511 GO:GO:0004221 Gene3D:3.40.532.10
            PANTHER:PTHR10589 EMBL:AL136370 HOVERGEN:HBG056021
            UniGene:Hs.145469 HGNC:HGNC:19678 ChiTaRS:UCHL5 EMBL:AK316064
            IPI:IPI00641843 SMR:B7Z9U9 STRING:B7Z9U9 MEROPS:C12.A03
            Ensembl:ENST00000530098 UCSC:uc010pox.2 Uniprot:B7Z9U9
        Length = 193

 Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
 Identities = 64/122 (52%), Positives = 91/122 (74%)

Query:    98 LKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKE 157
             +KGLA++NSD IR  HNSFAR + F   + K + K++D +HF+SY+PV+G LYELDGL+E
Sbjct:     1 MKGLALSNSDVIRQVHNSFARQQMF-EFDTKTSAKEEDAFHFVSYVPVNGRLYELDGLRE 59

Query:   158 GPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQ 217
             GPI LG C       DW+  V+PVI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E Q
Sbjct:    60 GPIDLGACNQD----DWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQ 115

Query:   218 RK 219
             R+
Sbjct:   116 RQ 117

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 65/147 (44%), Positives = 92/147 (62%)

Query:   163 GPCT-GGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRE 221
             GP   G     DW+  V+PVI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR   
Sbjct:    60 GPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR--- 116

Query:   222 RILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRR 279
                 QLA    E  +D    +  N  LS + +  E A  ++L+EEE  K K+++ ENIRR
Sbjct:   117 ----QLAE---EEPMDT---DQGNSMLSAIQS--EVAKNQMLIEEEVQKLKRYKIENIRR 164

Query:   280 KHNYIPFLFNFLKILAEKKQLKPLIEK 306
             KHNY+PF+   LK LAE +QL PL+EK
Sbjct:   165 KHNYLPFIMELLKTLAEHQQLIPLVEK 191


>UNIPROTKB|B4LQ24 [details] [associations]
            symbol:calypso "Ubiquitin carboxyl-terminal hydrolase
            calypso" species:7244 "Drosophila virilis" [GO:0000790 "nuclear
            chromatin" evidence=ISS] [GO:0003682 "chromatin binding"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISS] [GO:0006342 "chromatin silencing" evidence=ISS]
            [GO:0035517 "PR-DUB complex" evidence=ISS] [GO:0035522
            "monoubiquitinated histone H2A deubiquitination" evidence=ISS]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140
            GO:GO:0003682 GO:GO:0000790 GO:GO:0006511 GO:GO:0006342
            EMBL:CH940648 GO:GO:0035517 GO:GO:0035522 GO:GO:0004843
            GO:GO:0004221 KO:K08588 Gene3D:3.40.532.10 PANTHER:PTHR10589
            eggNOG:NOG249036 MEROPS:C12.A09 OMA:DKFRRVM OrthoDB:EOG4FN302
            RefSeq:XP_002049154.1 EnsemblMetazoa:FBtr0236831 GeneID:6626878
            KEGG:dvi:Dvir_GJ20906 FlyBase:FBgn0208042 InParanoid:B4LQ24
            Uniprot:B4LQ24
        Length = 462

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 89/232 (38%), Positives = 131/232 (56%)

Query:    26 YGLIFLFKWRPGEKDDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNC 75
             YG IFLF+W    +  R        + +KD     ++FFA QV+ N+CAT A+LS+LLNC
Sbjct:    68 YGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNC 127

Query:    76 PD--IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKD 133
              +  + +G  LS+LK  TK   PE KGLAI N+  +  AHNS A P+     E+  AG  
Sbjct:   128 NENNLQLGETLSRLKAHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVA 187

Query:   134 D-----DVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE- 187
                   + +HF+S++P++G L+ELDGLK  P++ G C   +   DW    + V+ ER+  
Sbjct:   188 SCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-CW--EEHEDWTDKFRRVMAERLGI 244

Query:   188 RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI---LQQL--ASLQSER 234
                + +IRFNLMAV+ +R+   T +LK  +  +  +   LQ+L  A  Q ER
Sbjct:   245 ATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVSGTLQKLLKADEQGER 296

 Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
 Identities = 42/189 (22%), Positives = 91/189 (48%)

Query:   135 DVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQP-----VIQERIERY 189
             + +HF+S++P++G L+ELDGLK  P++ G     +   D  + V          E+  R+
Sbjct:   194 EAFHFVSFVPINGQLFELDGLKPYPMNHGCWEEHEDWTDKFRRVMAERLGIATGEQDIRF 253

Query:   190 SKSEI----RFNL---MAVIKNRKELYTAELKEFQR---KRERILQQLASLQSERMVDKT 239
             +   +    R  +   + +++  + + +  L++  +   + ER  QQ     +  +++ +
Sbjct:   254 NLMAVVPDRRIAITHKLKMLRTNQAIVSGTLQKLLKADEQGERDEQQRPDTPNT-LLEPS 312

Query:   240 SFEA--LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEK 297
             +F A  L   L  ++  I    + +  E ++ + ++ +  RR HNY  F+  FL +LA +
Sbjct:   313 AFTARDLQSLLKNLDTEIAINEQHLADENDRRQMFKVDASRRTHNYDKFICTFLTMLAHQ 372

Query:   298 KQLKPLIEK 306
               L  L+ +
Sbjct:   373 GVLGELVSQ 381


>UNIPROTKB|B4JW98 [details] [associations]
            symbol:calypso "Ubiquitin carboxyl-terminal hydrolase
            calypso" species:7222 "Drosophila grimshawi" [GO:0000790 "nuclear
            chromatin" evidence=ISS] [GO:0003682 "chromatin binding"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISS] [GO:0006342 "chromatin silencing" evidence=ISS]
            [GO:0035517 "PR-DUB complex" evidence=ISS] [GO:0035522
            "monoubiquitinated histone H2A deubiquitination" evidence=ISS]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140
            GO:GO:0003682 GO:GO:0000790 GO:GO:0006511 GO:GO:0006342
            EMBL:CH916375 GO:GO:0035517 GO:GO:0035522 GO:GO:0004843
            GO:GO:0004221 KO:K08588 Gene3D:3.40.532.10 PANTHER:PTHR10589
            eggNOG:NOG249036 MEROPS:C12.A09 OMA:DKFRRVM OrthoDB:EOG4FN302
            RefSeq:XP_001995164.1 EnsemblMetazoa:FBtr0158411 GeneID:6568805
            KEGG:dgr:Dgri_GH22997 FlyBase:FBgn0130454 InParanoid:B4JW98
            Uniprot:B4JW98
        Length = 462

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 88/232 (37%), Positives = 130/232 (56%)

Query:    26 YGLIFLFKWRPGEKDDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNC 75
             YG IFLF+W    +  R        + +KD     ++FFA QV+ N+CAT A+LS+LLNC
Sbjct:    68 YGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNC 127

Query:    76 PD--IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKD 133
              +  + +G  L +LK  TK   PE KGLAI N+  +  AHNS A P+     E+  AG  
Sbjct:   128 NENNLQLGETLGRLKAHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVA 187

Query:   134 D-----DVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE- 187
                   + +HF+S++P++G L+ELDGLK  P++ G C   +   DW    + V+ ER+  
Sbjct:   188 SCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-CW--EEHEDWTDKFRRVMAERLGI 244

Query:   188 RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI---LQQL--ASLQSER 234
                + +IRFNLMAV+ +R+   T +LK  +  +  +   LQ+L  A  Q ER
Sbjct:   245 ATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVSGTLQKLLKADEQGER 296

 Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
 Identities = 42/189 (22%), Positives = 91/189 (48%)

Query:   135 DVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQP-----VIQERIERY 189
             + +HF+S++P++G L+ELDGLK  P++ G     +   D  + V          E+  R+
Sbjct:   194 EAFHFVSFVPINGQLFELDGLKPYPMNHGCWEEHEDWTDKFRRVMAERLGIATGEQDIRF 253

Query:   190 SKSEI----RFNL---MAVIKNRKELYTAELKEFQR---KRERILQQLASLQSERMVDKT 239
             +   +    R  +   + +++  + + +  L++  +   + ER  QQ     +  +++ +
Sbjct:   254 NLMAVVPDRRIAITHKLKMLRTNQAIVSGTLQKLLKADEQGERDEQQRPDTPTT-LLEPS 312

Query:   240 SFEA--LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEK 297
             +F A  L   L  ++  I    + +  E ++ + ++ +  RR HNY  F+  FL +LA +
Sbjct:   313 AFTARDLQSLLKNLDTEIAINEQHLADENDRRQMFKVDASRRTHNYDKFICTFLSMLAHQ 372

Query:   298 KQLKPLIEK 306
               L  L+ +
Sbjct:   373 GVLGELVSQ 381


>UNIPROTKB|B4KT51 [details] [associations]
            symbol:calypso "Ubiquitin carboxyl-terminal hydrolase
            calypso" species:7230 "Drosophila mojavensis" [GO:0000790 "nuclear
            chromatin" evidence=ISS] [GO:0003682 "chromatin binding"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISS] [GO:0006342 "chromatin silencing" evidence=ISS]
            [GO:0035517 "PR-DUB complex" evidence=ISS] [GO:0035522
            "monoubiquitinated histone H2A deubiquitination" evidence=ISS]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140
            GO:GO:0003682 GO:GO:0000790 GO:GO:0006511 GO:GO:0006342
            EMBL:CH933808 GO:GO:0035517 GO:GO:0035522 GO:GO:0004843
            GO:GO:0004221 KO:K08588 Gene3D:3.40.532.10 PANTHER:PTHR10589
            MEROPS:C12.A09 OrthoDB:EOG4FN302 RefSeq:XP_002005636.1
            EnsemblMetazoa:FBtr0169688 GeneID:6579754 KEGG:dmo:Dmoj_GI18963
            FlyBase:FBgn0141702 InParanoid:B4KT51 Uniprot:B4KT51
        Length = 461

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 81/207 (39%), Positives = 120/207 (57%)

Query:    26 YGLIFLFKWRPGEKDDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNC 75
             YG IFLF+W    +  R        + +KD     ++FFA QV+ N+CAT A+LS+LLNC
Sbjct:    68 YGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNC 127

Query:    76 PD--IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKD 133
              +  + +G  LS+LK  TK   PE KGLAI N+  +  AHNS A P+     E+  AG  
Sbjct:   128 NENNLQLGETLSRLKAHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVA 187

Query:   134 D-----DVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE- 187
                   + +HF+S++P++G L+ELDGLK  P++ G C   +   DW    + V+ +R+  
Sbjct:   188 SCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-CW--EEHEDWTDKFRRVMADRLGI 244

Query:   188 RYSKSEIRFNLMAVIKNRKELYTAELK 214
                + +IRFNLMAV+ +R+   T +LK
Sbjct:   245 ATGEQDIRFNLMAVVPDRRIAITHKLK 271

 Score = 162 (62.1 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 54/189 (28%), Positives = 97/189 (51%)

Query:   135 DVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDM-DWLQMVQPVIQERIERYSKSE 193
             + +HF+S++P++G L+ELDGLK  P++ G C     D  D  + V    +  I    + +
Sbjct:   194 EAFHFVSFVPINGQLFELDGLKPYPMNHG-CWEEHEDWTDKFRRVM-ADRLGIAT-GEQD 250

Query:   194 IRFNLMAVIKNRKELYTAELKEFQRKRERI---LQQL--ASLQSE---------RMVDKT 239
             IRFNLMAV+ +R+   T +LK  +  +  +   LQ+L  A  Q +          +++ +
Sbjct:   251 IRFNLMAVVPDRRIAITHKLKMLRTNQAIVSGTLQKLLKADEQGDDQQRPDTPNTLLEPS 310

Query:   240 SFEA--LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEK 297
             +F A  L   L  ++  I    + +  E ++ + ++ +  RR HNY  F+  FL +LA +
Sbjct:   311 AFTARDLQSLLKNLDTEIAINEQHLADENDRRQMFKVDASRRTHNYDKFICTFLSMLAHQ 370

Query:   298 KQLKPLIEK 306
               L  L+ +
Sbjct:   371 GVLGELVSQ 379


>UNIPROTKB|C9J7L9 [details] [associations]
            symbol:BAP1 "Ubiquitin carboxyl-terminal hydrolase BAP1"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707
            GO:GO:0005622 GO:GO:0006511 GO:GO:0004221 Gene3D:3.40.532.10
            PANTHER:PTHR10589 HGNC:HGNC:950 ChiTaRS:BAP1 HOGENOM:HOG000203918
            EMBL:AC092045 IPI:IPI00946816 ProteinModelPortal:C9J7L9 SMR:C9J7L9
            STRING:C9J7L9 Ensembl:ENST00000470173 ArrayExpress:C9J7L9
            Bgee:C9J7L9 Uniprot:C9J7L9
        Length = 112

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 61/112 (54%), Positives = 83/112 (74%)

Query:    52 LFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRA 111
             +FFA Q+I N+CAT A+LS+LLNC  +D+GP LS++K+FTK F PE KG AI N+  +  
Sbjct:     1 MFFAHQLIPNSCATHALLSVLLNCSSVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAK 60

Query:   112 AHNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPI 160
             AHNS ARPEP  +PE+Q   +A +  + +HF+SY+P+ G L+ELDGLK  PI
Sbjct:    61 AHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPI 112


>ASPGD|ASPL0000039550 [details] [associations]
            symbol:AN3453 species:162425 "Emericella nidulans"
            [GO:0005622 "intracellular" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 EMBL:BN001306
            GO:GO:0005622 GO:GO:0006511 GO:GO:0004221 Gene3D:3.40.532.10
            PANTHER:PTHR10589 EnsemblFungi:CADANIAT00009581
            HOGENOM:HOG000193407 OMA:RIHNSFA Uniprot:C8VHB3
        Length = 416

 Score = 214 (80.4 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
 Identities = 43/96 (44%), Positives = 62/96 (64%)

Query:    23 RPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGP 82
             +PVYG+IFLF+W+  + + +     P   L+FA+Q  NNACA+ A+L+I+ N    D+G 
Sbjct:    78 KPVYGIIFLFRWQEDDPEKQEA-SCPE-GLWFANQTANNACASVALLNIVNNIEGADLGE 135

Query:    83 ELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFAR 118
              L   K+FT  F P L+G AINN + ++  HNSFAR
Sbjct:   136 NLRSFKDFTMPFTPALRGDAINNFEFVKRIHNSFAR 171

 Score = 119 (46.9 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
 Identities = 36/138 (26%), Positives = 73/138 (52%)

Query:   134 DDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSE 193
             D  +HFI+++P  G +++ DGL+  P +LG     + + DWL +V+P I+ R+++Y    
Sbjct:   204 DAGFHFIAFVPALGKVWKFDGLERQPQALGVF---EPESDWLDLVKPNIEARMDKYG--- 257

Query:   194 IRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTSFEALNKSLSEVNA 253
             I F++++++++        L    ++ + I + +   + E   D++S    ++ L E N 
Sbjct:   258 IEFSILSLVRDPLPDLVNRLAVNIKQLQAIERAINPQKPELGCDESS---ASEPLDE-NT 313

Query:   254 GIEGATEKILMEEEKFKK 271
              + G  E   + EE F K
Sbjct:   314 -LLGPDESYGVTEEAFNK 330


>UNIPROTKB|H0Y4E0 [details] [associations]
            symbol:UCHL5 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L5" species:9606 "Homo sapiens" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001578 Pfam:PF01088
            GO:GO:0005622 GO:GO:0006511 GO:GO:0004221 Gene3D:3.40.532.10
            PANTHER:PTHR10589 EMBL:AL136370 HGNC:HGNC:19678 ChiTaRS:UCHL5
            ProteinModelPortal:H0Y4E0 PRIDE:H0Y4E0 Ensembl:ENST00000443327
            Bgee:H0Y4E0 Uniprot:H0Y4E0
        Length = 183

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 48/94 (51%), Positives = 71/94 (75%)

Query:   126 EQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQER 185
             + K + K++D +HF+SY+PV+G LYELDGL+EGPI LG C       DW+  V+PVI++R
Sbjct:     8 DTKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD----DWISAVRPVIEKR 63

Query:   186 IERYSKSEIRFNLMAVIKNRKELYTAELKEFQRK 219
             I++YS+ EIRFNLMA++ +RK +Y  ++ E QR+
Sbjct:    64 IQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQ 97

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 65/147 (44%), Positives = 92/147 (62%)

Query:   163 GPCT-GGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRE 221
             GP   G     DW+  V+PVI++RI++YS+ EIRFNLMA++ +RK +Y  ++ E QR   
Sbjct:    40 GPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR--- 96

Query:   222 RILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRR 279
                 QLA    E  +D    +  N  LS + +  E A  ++L+EEE  K K+++ ENIRR
Sbjct:    97 ----QLAE---EEPMDT---DQGNSMLSAIQS--EVAKNQMLIEEEVQKLKRYKIENIRR 144

Query:   280 KHNYIPFLFNFLKILAEKKQLKPLIEK 306
             KHNY+PF+   LK LAE +QL PL+EK
Sbjct:   145 KHNYLPFIMELLKTLAEHQQLIPLVEK 171


>UNIPROTKB|H0Y636 [details] [associations]
            symbol:UCHL5 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L5" species:9606 "Homo sapiens" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001578 GO:GO:0005622
            GO:GO:0006511 GO:GO:0004221 PANTHER:PTHR10589 EMBL:AL136370
            HGNC:HGNC:19678 ChiTaRS:UCHL5 ProteinModelPortal:H0Y636
            PRIDE:H0Y636 Ensembl:ENST00000449480 Bgee:H0Y636 Uniprot:H0Y636
        Length = 115

 Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 52/118 (44%), Positives = 73/118 (61%)

Query:   191 KSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTSFEALNKSLSE 250
             + EIRFNLMA++ +RK +Y  ++ E QR       QLA    E  +D    +  N  LS 
Sbjct:     2 EGEIRFNLMAIVSDRKMIYEQKIAELQR-------QLA----EEPMDT---DQGNSMLSA 47

Query:   251 VNAGIEGATEKILMEEE--KFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
             + +  E A  ++L+EEE  K K+++ ENIRRKHNY+PF+   LK LAE +QL PL+EK
Sbjct:    48 IQS--EVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEK 103


>FB|FBgn0010288 [details] [associations]
            symbol:Uch "Ubiquitin carboxy-terminal hydrolase"
            species:7227 "Drosophila melanogaster" [GO:0016579 "protein
            deubiquitination" evidence=IDA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=NAS;IDA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140
            GO:GO:0005875 EMBL:AE014134 GO:GO:0008234 GO:GO:0006511
            GO:GO:0016579 GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589
            eggNOG:NOG327708 GeneTree:ENSGT00510000046640 KO:K05609 EMBL:S60346
            EMBL:X69678 EMBL:X69679 EMBL:AF145600 PIR:S33956
            RefSeq:NP_001188681.1 RefSeq:NP_476940.1 UniGene:Dm.4794
            ProteinModelPortal:P35122 SMR:P35122 MINT:MINT-1599795
            STRING:P35122 MEROPS:C12.008 PaxDb:P35122
            EnsemblMetazoa:FBtr0077844 EnsemblMetazoa:FBtr0303459 GeneID:33397
            KEGG:dme:Dmel_CG4265 CTD:33397 FlyBase:FBgn0010288
            InParanoid:P35122 OMA:PEANTRF OrthoDB:EOG4G4F6N PhylomeDB:P35122
            GenomeRNAi:33397 NextBio:783351 Bgee:P35122 GermOnline:CG4265
            Uniprot:P35122
        Length = 227

 Score = 190 (71.9 bits), Expect = 7.0e-15, P = 7.0e-15
 Identities = 58/191 (30%), Positives = 99/191 (51%)

Query:    23 RPVYGLIFLF-------KWRPGEKDDRVV-IKDPNP-NLFFASQVINNACATQAILSILL 73
             RPV   I LF       K R  E+ DR+  +++ +P +LF+  Q  +NAC T A++  + 
Sbjct:    45 RPVKAFILLFPCSETYEKHR-AEEHDRIKEVEEQHPEDLFYMRQFTHNACGTVALIHSVA 103

Query:    74 NCPDIDIGPELSKLKEF---TKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAA 130
             N  ++DI  +   LK+F   T +  PE +G A+   +   A H + A+       +  AA
Sbjct:   104 NNKEVDI--DRGVLKDFLEKTASLSPEERGRALEKDEKFTADHEALAQEG-----QTNAA 156

Query:   131 GKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYS 190
               +  ++HFI+ +  +G LYELDG K  PI  GP +    +  +++    V +E + R  
Sbjct:   157 NHEKVIHHFIALVNKEGTLYELDGRKSFPIKHGPTS----EETFVKDAAKVCKEFMAR-D 211

Query:   191 KSEIRFNLMAV 201
              +E+RF ++A+
Sbjct:   212 PNEVRFTVLAL 222


>UNIPROTKB|H0Y4K0 [details] [associations]
            symbol:UCHL5 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L5" species:9606 "Homo sapiens" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001578 GO:GO:0005622
            GO:GO:0006511 GO:GO:0004221 PANTHER:PTHR10589 EMBL:AL136370
            HGNC:HGNC:19678 ChiTaRS:UCHL5 PRIDE:H0Y4K0 Ensembl:ENST00000416915
            Bgee:H0Y4K0 Uniprot:H0Y4K0
        Length = 99

 Score = 183 (69.5 bits), Expect = 4.7e-14, P = 4.7e-14
 Identities = 48/112 (42%), Positives = 68/112 (60%)

Query:   197 NLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIE 256
             NLMA++ +RK +Y  ++ E QR       QLA    E  +D    +  N  LS + +  E
Sbjct:     2 NLMAIVSDRKMIYEQKIAELQR-------QLA----EEPMDT---DQGNSMLSAIQS--E 45

Query:   257 GATEKILMEEE--KFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
              A  ++L+EEE  K K+++ ENIRRKHNY+PF+   LK LAE +QL PL+EK
Sbjct:    46 VAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEK 97


>UNIPROTKB|Q2TBG8 [details] [associations]
            symbol:UCHL3 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L3" species:9913 "Bos taurus" [GO:0043130 "ubiquitin binding"
            evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001578
            Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140 GO:GO:0005739
            GO:GO:0005634 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 eggNOG:NOG327708
            GeneTree:ENSGT00510000046640 HOGENOM:HOG000182400 KO:K05609
            HOVERGEN:HBG075483 EMBL:BC110247 IPI:IPI00705749
            RefSeq:NP_001035631.1 UniGene:Bt.27926 ProteinModelPortal:Q2TBG8
            SMR:Q2TBG8 STRING:Q2TBG8 PRIDE:Q2TBG8 Ensembl:ENSBTAT00000035577
            GeneID:520170 KEGG:bta:520170 CTD:7347 InParanoid:Q2TBG8
            OMA:QTEAPNI OrthoDB:EOG4HX51V NextBio:20873040 ArrayExpress:Q2TBG8
            Uniprot:Q2TBG8
        Length = 230

 Score = 182 (69.1 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 60/191 (31%), Positives = 92/191 (48%)

Query:    23 RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQVINNACATQAILSILLN 74
             RPV  ++ LF    K+     ++   IK    D   +++F  Q I+NAC T  ++  + N
Sbjct:    47 RPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIAN 106

Query:    75 CPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAG 131
               D    + G  L K  E + +  PE +   + N DAIR  H + A        + +A  
Sbjct:   107 NKDKMHFESGSTLKKFLEESASMSPEERARYLENYDAIRVTHETSAHEG-----QTEAPN 161

Query:   132 KDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYS 190
              D+ V  HFI+ + VDG LYELDG K  PI+ G  +    D   L+    V ++ +ER  
Sbjct:   162 IDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETS----DETLLEDAIEVCKKFMER-D 216

Query:   191 KSEIRFNLMAV 201
               E+RFN +A+
Sbjct:   217 PDELRFNAIAL 227


>UNIPROTKB|P15374 [details] [associations]
            symbol:UCHL3 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L3" species:9606 "Homo sapiens" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=TAS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=NAS]
            [GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0043130 "ubiquitin
            binding" evidence=IDA] [GO:0008233 "peptidase activity"
            evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005739 "mitochondrion"
            evidence=IDA] InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707
            PROSITE:PS00140 GO:GO:0005739 GO:GO:0005634 GO:GO:0008234
            GO:GO:0006511 GO:GO:0008233 GO:GO:0043130 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 EMBL:AL137244 EMBL:CH471093
            PDB:1XD3 PDBsum:1XD3 eggNOG:NOG327708 HOGENOM:HOG000182400
            KO:K05609 HOVERGEN:HBG075483 CTD:7347 OMA:QTEAPNI OrthoDB:EOG4HX51V
            EMBL:M30496 EMBL:BT019359 EMBL:CR456855 EMBL:AK313665 EMBL:BC018125
            IPI:IPI00011250 PIR:A40085 RefSeq:NP_001257881.1 RefSeq:NP_005993.1
            UniGene:Hs.162241 PDB:1UCH PDBsum:1UCH ProteinModelPortal:P15374
            SMR:P15374 DIP:DIP-29135N IntAct:P15374 MINT:MINT-2863935
            STRING:P15374 MEROPS:C12.003 PhosphoSite:P15374 DMDM:136682
            OGP:P15374 REPRODUCTION-2DPAGE:IPI00011250 PaxDb:P15374
            PeptideAtlas:P15374 PRIDE:P15374 DNASU:7347 Ensembl:ENST00000377595
            GeneID:7347 KEGG:hsa:7347 UCSC:uc001vjq.3 GeneCards:GC13P076123
            HGNC:HGNC:12515 HPA:HPA019678 MIM:603090 neXtProt:NX_P15374
            PharmGKB:PA37162 PhylomeDB:P15374 BindingDB:P15374
            ChEMBL:CHEMBL6195 ChiTaRS:UCHL3 EvolutionaryTrace:P15374
            GenomeRNAi:7347 NextBio:28762 ArrayExpress:P15374 Bgee:P15374
            CleanEx:HS_UCHL3 Genevestigator:P15374 GermOnline:ENSG00000118939
            Uniprot:P15374
        Length = 230

 Score = 181 (68.8 bits), Expect = 8.0e-14, P = 8.0e-14
 Identities = 60/191 (31%), Positives = 92/191 (48%)

Query:    23 RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQVINNACATQAILSILLN 74
             RPV  ++ LF    K+     ++   IK    D   +++F  Q I+NAC T  ++  + N
Sbjct:    47 RPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIAN 106

Query:    75 CPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAG 131
               D    + G  L K  E + +  PE +   + N DAIR  H + A        + +A  
Sbjct:   107 NKDKMHFESGSTLKKFLEESVSMSPEERARYLENYDAIRVTHETSAHEG-----QTEAPS 161

Query:   132 KDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYS 190
              D+ V  HFI+ + VDG LYELDG K  PI+ G  +    D   L+    V ++ +ER  
Sbjct:   162 IDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETS----DETLLEDAIEVCKKFMER-D 216

Query:   191 KSEIRFNLMAV 201
               E+RFN +A+
Sbjct:   217 PDELRFNAIAL 227


>MGI|MGI:1355274 [details] [associations]
            symbol:Uchl3 "ubiquitin carboxyl-terminal esterase L3
            (ubiquitin thiolesterase)" species:10090 "Mus musculus" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0005622
            "intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0007628 "adult walking behavior" evidence=IGI] [GO:0008233
            "peptidase activity" evidence=ISO;IDA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=ISA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0030163 "protein catabolic process"
            evidence=ISO;IDA] [GO:0032869 "cellular response to insulin
            stimulus" evidence=IDA] [GO:0042755 "eating behavior" evidence=IGI]
            [GO:0043130 "ubiquitin binding" evidence=ISO] [GO:0045600 "positive
            regulation of fat cell differentiation" evidence=IDA] [GO:0060041
            "retina development in camera-type eye" evidence=IMP]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140
            MGI:MGI:1355274 GO:GO:0005737 GO:GO:0032869 GO:GO:0008234
            GO:GO:0042755 GO:GO:0045600 GO:GO:0060041 GO:GO:0030163
            GO:GO:0006511 GO:GO:0008233 GO:GO:0007628 GO:GO:0016579
            GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589 eggNOG:NOG327708
            GeneTree:ENSGT00510000046640 HOGENOM:HOG000182400 KO:K05609
            BRENDA:3.4.19.12 HOVERGEN:HBG075483 CTD:7347 OMA:QTEAPNI
            OrthoDB:EOG4HX51V MEROPS:C12.003 EMBL:AF247358 EMBL:AB033370
            EMBL:BC048481 IPI:IPI00311369 PIR:JC7688 RefSeq:NP_057932.2
            UniGene:Mm.275970 ProteinModelPortal:Q9JKB1 SMR:Q9JKB1
            STRING:Q9JKB1 PhosphoSite:Q9JKB1 REPRODUCTION-2DPAGE:IPI00311369
            REPRODUCTION-2DPAGE:Q9JKB1 PaxDb:Q9JKB1 PRIDE:Q9JKB1
            Ensembl:ENSMUST00000002289 GeneID:50933 KEGG:mmu:50933
            UCSC:uc007uvw.1 InParanoid:Q9JKB1 BindingDB:Q9JKB1 NextBio:307977
            Bgee:Q9JKB1 Genevestigator:Q9JKB1 GermOnline:ENSMUSG00000022111
            Uniprot:Q9JKB1
        Length = 230

 Score = 181 (68.8 bits), Expect = 8.0e-14, P = 8.0e-14
 Identities = 60/191 (31%), Positives = 92/191 (48%)

Query:    23 RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQVINNACATQAILSILLN 74
             RPV  ++ LF    K+     ++   IK    D   +++F  Q I+NAC T  ++  + N
Sbjct:    47 RPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIAN 106

Query:    75 CPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAG 131
               D    + G  L K  E + +  PE +   + N DAIR  H + A        + +A  
Sbjct:   107 NKDKMHFESGSTLKKFLEESVSMSPEERAKFLENYDAIRVTHETSAHEG-----QTEAPS 161

Query:   132 KDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYS 190
              D+ V  HFI+ + VDG LYELDG K  PI+ G  +    D   L+    V ++ +ER  
Sbjct:   162 IDEKVDLHFIALVHVDGHLYELDGRKPFPINHGKTS----DETLLEDAIEVCKKFMER-D 216

Query:   191 KSEIRFNLMAV 201
               E+RFN +A+
Sbjct:   217 PDELRFNAIAL 227


>UNIPROTKB|F1RHF0 [details] [associations]
            symbol:UCHL3 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L3" species:9823 "Sus scrofa" [GO:0043130 "ubiquitin binding"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001578 Pfam:PF01088
            PRINTS:PR00707 PROSITE:PS00140 GO:GO:0005739 GO:GO:0005634
            GO:GO:0006511 GO:GO:0008233 GO:GO:0004221 Gene3D:3.40.532.10
            PANTHER:PTHR10589 GeneTree:ENSGT00510000046640 OMA:QTEAPNI
            EMBL:AEMK01058175 EMBL:AEMK01193376 EMBL:CU466967
            Ensembl:ENSSSCT00000010377 ArrayExpress:F1RHF0 Uniprot:F1RHF0
        Length = 212

 Score = 180 (68.4 bits), Expect = 1.1e-13, P = 1.1e-13
 Identities = 59/191 (30%), Positives = 93/191 (48%)

Query:    23 RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQVINNACATQAILSILLN 74
             RPV  ++ LF    K+     ++   IK    D  P+++F  Q I+NAC T  ++  + N
Sbjct:    29 RPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTPSVYFMKQTISNACGTIGLIHAIAN 88

Query:    75 CPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAG 131
               +    + G  L K  E + +  PE +   + + DAIR  H + A        + +A  
Sbjct:    89 NKNKMHFESGSTLKKFLEESASMSPEERARYLESYDAIRVTHETSAHEG-----QTEAPN 143

Query:   132 KDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYS 190
              D+ V  HFI+ + VDG LYELDG K  PI+ G  +    D   L+    V ++ +ER  
Sbjct:   144 IDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETS----DETLLEDAIEVCKKFMER-D 198

Query:   191 KSEIRFNLMAV 201
               E+RFN +A+
Sbjct:   199 PDELRFNAIAL 209


>RGD|1561196 [details] [associations]
            symbol:Uchl3 "ubiquitin carboxyl-terminal esterase L3 (ubiquitin
            thiolesterase)" species:10116 "Rattus norvegicus" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0005622
            "intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
            evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0007628 "adult walking behavior"
            evidence=ISO] [GO:0008233 "peptidase activity" evidence=ISO]
            [GO:0030163 "protein catabolic process" evidence=ISO] [GO:0032869
            "cellular response to insulin stimulus" evidence=ISO] [GO:0042755
            "eating behavior" evidence=ISO] [GO:0043130 "ubiquitin binding"
            evidence=ISO] [GO:0045600 "positive regulation of fat cell
            differentiation" evidence=ISO] [GO:0060041 "retina development in
            camera-type eye" evidence=ISO] InterPro:IPR001578 Pfam:PF01088
            PRINTS:PR00707 PROSITE:PS00140 RGD:1561196 GO:GO:0005739
            GO:GO:0005634 GO:GO:0006511 GO:GO:0008233 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 GeneTree:ENSGT00510000046640
            OMA:RHEGHEA IPI:IPI00208286 PRIDE:F1LM67 Ensembl:ENSRNOT00000012842
            UCSC:RGD:1561196 ArrayExpress:F1LM67 Uniprot:F1LM67
        Length = 228

 Score = 178 (67.7 bits), Expect = 1.8e-13, P = 1.8e-13
 Identities = 60/191 (31%), Positives = 91/191 (47%)

Query:    23 RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQVINNACATQAILSILLN 74
             RPV  ++ LF    K+     ++   IK    D   +++F  Q I+NAC T  ++  + N
Sbjct:    45 RPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIAN 104

Query:    75 CPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAG 131
               D    + G  L K  E +    PE +   + N DAIR  H + A        + +A  
Sbjct:   105 NKDKMHFESGSALKKFLEESVAMSPEERARHLENYDAIRVTHETSAHEG-----QTEAPS 159

Query:   132 KDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYS 190
              D+ V  HFI+ + VDG LYELDG K  PI+ G  +    D   L+    V ++ +ER  
Sbjct:   160 IDEKVDLHFIAVVHVDGHLYELDGRKPFPINHGKTS----DETLLEDAIEVCKKFMER-D 214

Query:   191 KSEIRFNLMAV 201
               E+RFN +A+
Sbjct:   215 PDELRFNAIAL 225


>RGD|621131 [details] [associations]
            symbol:Uchl3-ps1 "ubiquitin carboxyl-terminal esterase L3,
            pseudogene 1" species:10116 "Rattus norvegicus" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001578 Pfam:PF01088
            PRINTS:PR00707 PROSITE:PS00140 RGD:621131 GO:GO:0005739
            GO:GO:0005634 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 eggNOG:NOG327708
            HOGENOM:HOG000182400 KO:K05609 HOVERGEN:HBG075483 CTD:7347
            OMA:QTEAPNI MEROPS:C12.003 EMBL:AB043959 IPI:IPI00208286
            RefSeq:NP_001103635.1 UniGene:Rn.145487 ProteinModelPortal:Q91Y78
            SMR:Q91Y78 STRING:Q91Y78 PhosphoSite:Q91Y78 PRIDE:Q91Y78
            GeneID:498560 KEGG:rno:498560 InParanoid:Q91Y78 NextBio:700167
            ArrayExpress:Q91Y78 Genevestigator:Q91Y78
            GermOnline:ENSRNOG00000006401 Uniprot:Q91Y78
        Length = 230

 Score = 178 (67.7 bits), Expect = 1.8e-13, P = 1.8e-13
 Identities = 60/191 (31%), Positives = 91/191 (47%)

Query:    23 RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQVINNACATQAILSILLN 74
             RPV  ++ LF    K+     ++   IK    D   +++F  Q I+NAC T  ++  + N
Sbjct:    47 RPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIAN 106

Query:    75 CPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAG 131
               D    + G  L K  E +    PE +   + N DAIR  H + A        + +A  
Sbjct:   107 NKDKMHFESGSALKKFLEESVAMSPEERARHLENYDAIRVTHETSAHEG-----QTEAPS 161

Query:   132 KDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYS 190
              D+ V  HFI+ + VDG LYELDG K  PI+ G  +    D   L+    V ++ +ER  
Sbjct:   162 IDEKVDLHFIALVHVDGHLYELDGRKPFPINHGKTS----DETLLEDAIEVCKKFMER-D 216

Query:   191 KSEIRFNLMAV 201
               E+RFN +A+
Sbjct:   217 PDELRFNAIAL 227


>ZFIN|ZDB-GENE-030131-3844 [details] [associations]
            symbol:uchl1 "ubiquitin carboxyl-terminal esterase
            L1 (ubiquitin thiolesterase)" species:7955 "Danio rerio"
            [GO:0005622 "intracellular" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001578
            Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140
            ZFIN:ZDB-GENE-030131-3844 GO:GO:0005622 GO:GO:0006511 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 HSSP:P15374 MEROPS:C12.001
            CTD:7345 HOVERGEN:HBG075483 KO:K05611 EMBL:BC049044 IPI:IPI00512853
            RefSeq:NP_958885.1 UniGene:Dr.8724 ProteinModelPortal:Q7ZTI4
            SMR:Q7ZTI4 STRING:Q7ZTI4 PRIDE:Q7ZTI4 GeneID:325119 KEGG:dre:325119
            InParanoid:Q7ZTI4 NextBio:20809129 ArrayExpress:Q7ZTI4 Bgee:Q7ZTI4
            Uniprot:Q7ZTI4
        Length = 218

 Score = 176 (67.0 bits), Expect = 3.1e-13, P = 3.1e-13
 Identities = 49/156 (31%), Positives = 76/156 (48%)

Query:    51 NLFFASQVINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSD 107
             +++F  Q + N+C T  ++  + N  D    D    L K  E T    P  +   +  + 
Sbjct:    73 DVYFLKQTVVNSCGTVGLVHAVANNQDSIDFDNNSALKKFLEATSGMSPAERAKELEQNK 132

Query:   108 AIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTG 167
             AI+  H++ A      PE  K        +HFI+++ VDG LYELDG  +GP+S GP   
Sbjct:   133 AIQETHDAVADEGQCRPEADKVN------FHFITFVNVDGRLYELDGRIDGPVSHGPTKP 186

Query:   168 GQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 203
                 MD  +    V +E +ER  K E+RF+ +A+ K
Sbjct:   187 DSFVMDAAR----VCREFMER-EKGEVRFSAVALCK 217


>UNIPROTKB|F1NY51 [details] [associations]
            symbol:UCHL3 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0043130 "ubiquitin binding"
            evidence=IEA] InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707
            PROSITE:PS00140 GO:GO:0005739 GO:GO:0005634 GO:GO:0006511
            GO:GO:0008233 GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589
            GeneTree:ENSGT00510000046640 OMA:QTEAPNI EMBL:AADN02042644
            IPI:IPI00570997 ProteinModelPortal:F1NY51 PRIDE:F1NY51
            Ensembl:ENSGALT00000027356 Uniprot:F1NY51
        Length = 230

 Score = 173 (66.0 bits), Expect = 6.8e-13, P = 6.8e-13
 Identities = 58/191 (30%), Positives = 93/191 (48%)

Query:    23 RPVYGLIFLF----KWRP--GEKDDRVVIK--DPNPNLFFASQVINNACATQAILSILLN 74
             RPV  ++ LF    K+     E+++R+  K  D   +++F  Q INNAC T  ++  + N
Sbjct:    47 RPVCAVLLLFPITEKYETFRTEEEERIKAKGQDVKSSVYFMKQTINNACGTIGLIHAIAN 106

Query:    75 CPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAG 131
               +    +    L K  E + +  PE +   +   +AIR  H S A        + +A  
Sbjct:   107 NREKMNFETNSSLKKFLEDSLSMTPEERAKYLETYEAIRVTHESSAHEG-----QTEAPS 161

Query:   132 KDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYS 190
              D+ V  HFI+ + V G LYELDG K  PI+ G  +    D  +L+    V ++ +ER  
Sbjct:   162 IDEKVDLHFIALVNVGGHLYELDGRKPFPINHGETS----DDSFLEDAIEVCKKFMER-D 216

Query:   191 KSEIRFNLMAV 201
               E+RFN +A+
Sbjct:   217 PEELRFNAIAL 227


>MGI|MGI:1890440 [details] [associations]
            symbol:Uchl4 "ubiquitin carboxyl-terminal esterase L4"
            species:10090 "Mus musculus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140
            MGI:MGI:1890440 GO:GO:0005737 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589 eggNOG:NOG327708
            GeneTree:ENSGT00510000046640 HOGENOM:HOG000182400 KO:K05609
            HOVERGEN:HBG075483 OrthoDB:EOG4HX51V EMBL:AB035420 IPI:IPI00118499
            PIR:JC7689 RefSeq:NP_291085.1 UniGene:Mm.390180
            ProteinModelPortal:P58321 SMR:P58321 STRING:P58321 MEROPS:C12.007
            PhosphoSite:P58321 PaxDb:P58321 PRIDE:P58321
            Ensembl:ENSMUST00000039011 GeneID:93841 KEGG:mmu:93841 CTD:93841
            InParanoid:P58321 OMA:GMESELL NextBio:351701 Bgee:P58321
            CleanEx:MM_UCHL4 Genevestigator:P58321
            GermOnline:ENSMUSG00000035337 Uniprot:P58321
        Length = 233

 Score = 173 (66.0 bits), Expect = 6.8e-13, P = 6.8e-13
 Identities = 61/194 (31%), Positives = 93/194 (47%)

Query:    23 RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQVINNACATQAILSIL-- 72
             RPV  ++ LF    K+     ++   IK    D   +++F  Q I+NAC T   + ++  
Sbjct:    47 RPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGTIGLIHA 106

Query:    73 -LNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQK 128
               N  D    + G  L K  E + +  PE +   + N DAIR  H + A        + +
Sbjct:   107 IANNKDKVHFESGSTLKKFLEESVSMSPEERAKYLENYDAIRVTHETSAHEG-----QTE 161

Query:   129 AAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE 187
             A   D+ V  HFI+ + VDG LYELDG K  PI+ G  +    D   L+ V  V ++ +E
Sbjct:   162 APSIDEKVDLHFIALVHVDGHLYELDGWKPFPINHGKTS----DETLLEDVIKVCKKFME 217

Query:   188 RYSKSEIRFNLMAV 201
             R    E+RFN +A+
Sbjct:   218 R-DPDELRFNAIAL 230


>UNIPROTKB|Q06AB3 [details] [associations]
            symbol:UCHL3 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L3" species:9823 "Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707
            PROSITE:PS00140 GO:GO:0005737 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589 KO:K05609
            BRENDA:3.4.19.12 HOVERGEN:HBG075483 CTD:7347 MEROPS:C12.003
            EMBL:DQ972951 RefSeq:NP_001070695.1 UniGene:Ssc.13668
            ProteinModelPortal:Q06AB3 SMR:Q06AB3 GeneID:768115 KEGG:ssc:768115
            Uniprot:Q06AB3
        Length = 230

 Score = 170 (64.9 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 57/191 (29%), Positives = 92/191 (48%)

Query:    23 RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQVINNACATQAILSILLN 74
             RPV  ++ LF    K+     ++   IK    D  P+++F  Q I+NAC T  ++  + N
Sbjct:    47 RPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTPSVYFMKQTISNACGTIGLIHAIAN 106

Query:    75 CPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAG 131
               +    + G  L K  E + +  P+ +   + + DAI   H + A        + +A  
Sbjct:   107 NKNKMHFESGSTLKKFLEESASMSPDERARYLESYDAIPVTHETSAHEG-----QTEAPN 161

Query:   132 KDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYS 190
              D+ V  HFI+ + VDG LYELDG K  PI+ G  +    D   L+    V ++ +ER  
Sbjct:   162 IDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETS----DETLLEDAIEVCKKFMER-D 216

Query:   191 KSEIRFNLMAV 201
               E+RFN +A+
Sbjct:   217 PDELRFNAIAL 227


>UNIPROTKB|F6XVD7 [details] [associations]
            symbol:UCHL1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707
            PROSITE:PS00140 GO:GO:0005622 GO:GO:0006511 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 GeneTree:ENSGT00510000046640
            OMA:SAKICRQ Ensembl:ENSCAFT00000025162 EMBL:AAEX03002526
            Uniprot:F6XVD7
        Length = 224

 Score = 167 (63.8 bits), Expect = 3.3e-12, P = 3.3e-12
 Identities = 53/162 (32%), Positives = 84/162 (51%)

Query:    46 KDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLA 102
             ++ +P ++F  Q I N+C T  ++  + N  D     + S LK+F   T+   PE +   
Sbjct:    74 QEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKC 133

Query:   103 INNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPIS 161
                ++AI+AAH++ A+      E Q     DD V +HFI +  VDG LYELDG    P++
Sbjct:   134 FEKNEAIQAAHDAVAQ------EGQCRV--DDKVNFHFILFNNVDGHLYELDGRMPFPVN 185

Query:   162 LGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 203
              G  T  +  +  LQ    V +E  ER  + E+RF+ +A+ K
Sbjct:   186 HG--TSSEDSL--LQDAAKVCREFTER-EQGEVRFSAVALCK 222


>MGI|MGI:103149 [details] [associations]
            symbol:Uchl1 "ubiquitin carboxy-terminal hydrolase L1"
            species:10090 "Mus musculus" [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISO] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IDA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISO]
            [GO:0006950 "response to stress" evidence=IMP] [GO:0007409
            "axonogenesis" evidence=IMP] [GO:0007412 "axon target recognition"
            evidence=IMP] [GO:0007628 "adult walking behavior"
            evidence=IGI;IMP] [GO:0008152 "metabolic process" evidence=IDA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0008242 "omega
            peptidase activity" evidence=ISO] [GO:0008283 "cell proliferation"
            evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=ISO] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
            [GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0019896
            "axon transport of mitochondrion" evidence=IMP] [GO:0030424 "axon"
            evidence=IDA] [GO:0031694 "alpha-2A adrenergic receptor binding"
            evidence=ISO] [GO:0042755 "eating behavior" evidence=IGI]
            [GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043130
            "ubiquitin binding" evidence=ISO;IDA] [GO:0043407 "negative
            regulation of MAP kinase activity" evidence=ISO] [GO:0048747
            "muscle fiber development" evidence=IGI] [GO:0050905 "neuromuscular
            process" evidence=IMP] InterPro:IPR001578 Pfam:PF01088
            PRINTS:PR00707 PROSITE:PS00140 MGI:MGI:103149 GO:GO:0005829
            GO:GO:0005886 GO:GO:0005634 GO:GO:0006950 GO:GO:0005789
            GO:GO:0016874 GO:GO:0008283 GO:GO:0030424 GO:GO:0043025
            GO:GO:0042755 GO:GO:0050905 GO:GO:0048747 GO:GO:0019896
            GO:GO:0043407 GO:GO:0006511 GO:GO:0043130 GO:GO:0007628
            GO:GO:0004197 GO:GO:0008242 GO:GO:0016579 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 GO:GO:0007412 eggNOG:NOG327708
            GeneTree:ENSGT00510000046640 BRENDA:3.4.19.12 MEROPS:C12.001
            CTD:7345 HOVERGEN:HBG075483 KO:K05611 OMA:SAKICRQ OrthoDB:EOG4RJG2F
            ChiTaRS:UCHL1 EMBL:AB025313 EMBL:AF172334 EMBL:AK013729
            EMBL:BC039177 IPI:IPI00313962 RefSeq:NP_035800.2 UniGene:Mm.29807
            ProteinModelPortal:Q9R0P9 SMR:Q9R0P9 IntAct:Q9R0P9 STRING:Q9R0P9
            PhosphoSite:Q9R0P9 REPRODUCTION-2DPAGE:IPI00313962
            REPRODUCTION-2DPAGE:Q9R0P9 UCD-2DPAGE:Q9R0P9 PaxDb:Q9R0P9
            PRIDE:Q9R0P9 Ensembl:ENSMUST00000031131 GeneID:22223 KEGG:mmu:22223
            UCSC:uc008xpf.2 InParanoid:Q9R0P9 BindingDB:Q9R0P9 NextBio:302243
            Bgee:Q9R0P9 CleanEx:MM_UCHL1 Genevestigator:Q9R0P9
            GermOnline:ENSMUSG00000029223 Uniprot:Q9R0P9
        Length = 223

 Score = 167 (63.8 bits), Expect = 3.3e-12, P = 3.3e-12
 Identities = 53/162 (32%), Positives = 82/162 (50%)

Query:    46 KDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLA 102
             ++ +P ++F  Q I N+C T  ++  + N  D     + S LK+F   T+   PE +   
Sbjct:    73 QEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKC 132

Query:   103 INNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPIS 161
                ++AI+AAH+S A+      E Q     DD V +HFI +  VDG LYELDG    P++
Sbjct:   133 FEKNEAIQAAHDSVAQ------EGQCRV--DDKVNFHFILFNNVDGHLYELDGRMPFPVN 184

Query:   162 LGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 203
                  G   +   LQ    V +E  ER  + E+RF+ +A+ K
Sbjct:   185 ----HGASSEDSLLQDAAKVCREFTER-EQGEVRFSAVALCK 221


>RGD|3928 [details] [associations]
            symbol:Uchl1 "ubiquitin carboxyl-terminal esterase L1 (ubiquitin
          thiolesterase)" species:10116 "Rattus norvegicus" [GO:0004197
          "cysteine-type endopeptidase activity" evidence=IEA;ISO] [GO:0004221
          "ubiquitin thiolesterase activity" evidence=IEA;ISO] [GO:0005622
          "intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
          [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005789 "endoplasmic
          reticulum membrane" evidence=IEA] [GO:0005829 "cytosol"
          evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
          [GO:0006511 "ubiquitin-dependent protein catabolic process"
          evidence=IEA;IDA] [GO:0006950 "response to stress" evidence=IEA;ISO]
          [GO:0007409 "axonogenesis" evidence=ISO] [GO:0007412 "axon target
          recognition" evidence=IEA;ISO] [GO:0007628 "adult walking behavior"
          evidence=IEA;ISO] [GO:0008152 "metabolic process" evidence=ISO]
          [GO:0008242 "omega peptidase activity" evidence=IEA;ISO] [GO:0008283
          "cell proliferation" evidence=IEA;ISO] [GO:0016579 "protein
          deubiquitination" evidence=IEA;ISO] [GO:0016874 "ligase activity"
          evidence=IEA] [GO:0019233 "sensory perception of pain" evidence=IDA]
          [GO:0019896 "axon transport of mitochondrion" evidence=IEA;ISO]
          [GO:0030424 "axon" evidence=IEA;ISO] [GO:0031694 "alpha-2A adrenergic
          receptor binding" evidence=IEA;ISO] [GO:0042755 "eating behavior"
          evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IEA;ISO]
          [GO:0043130 "ubiquitin binding" evidence=IEA;ISO] [GO:0043407
          "negative regulation of MAP kinase activity" evidence=IEA;ISO]
          [GO:0048747 "muscle fiber development" evidence=IEA;ISO] [GO:0050905
          "neuromuscular process" evidence=IEA;ISO] [GO:0005730 "nucleolus"
          evidence=ISO] InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707
          PROSITE:PS00140 RGD:3928 GO:GO:0005789 GO:GO:0016874 GO:GO:0019233
          GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 Gene3D:3.40.532.10
          PANTHER:PTHR10589 eggNOG:NOG327708 GeneTree:ENSGT00510000046640
          HOGENOM:HOG000182400 BRENDA:3.4.19.12 MEROPS:C12.001 CTD:7345
          HOVERGEN:HBG075483 KO:K05611 OrthoDB:EOG4RJG2F EMBL:D10699
          EMBL:BC060573 IPI:IPI00204375 PIR:JX0222 RefSeq:NP_058933.2
          UniGene:Rn.107213 ProteinModelPortal:Q00981 SMR:Q00981 STRING:Q00981
          PhosphoSite:Q00981 World-2DPAGE:0004:Q00981 PRIDE:Q00981
          Ensembl:ENSRNOT00000003248 GeneID:29545 KEGG:rno:29545 UCSC:RGD:3928
          BindingDB:Q00981 NextBio:609557 ArrayExpress:Q00981
          Genevestigator:Q00981 GermOnline:ENSRNOG00000002343 Uniprot:Q00981
        Length = 223

 Score = 167 (63.8 bits), Expect = 3.3e-12, P = 3.3e-12
 Identities = 53/162 (32%), Positives = 82/162 (50%)

Query:    46 KDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLA 102
             ++ +P ++F  Q I N+C T  ++  + N  D     + S LK+F   T+   PE +   
Sbjct:    73 QEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKC 132

Query:   103 INNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPIS 161
                ++AI+AAH+S A+      E Q     DD V +HFI +  VDG LYELDG    P++
Sbjct:   133 FEKNEAIQAAHDSVAQ------EGQCRV--DDKVNFHFILFNNVDGHLYELDGRMPFPVN 184

Query:   162 LGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 203
                  G   +   LQ    V +E  ER  + E+RF+ +A+ K
Sbjct:   185 ----HGASSEDSLLQDAAKVCREFTER-EQGEVRFSAVALCK 221


>UNIPROTKB|F1NIT5 [details] [associations]
            symbol:UCHL1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0006950 "response to stress" evidence=IEA] [GO:0007412 "axon
            target recognition" evidence=IEA] [GO:0007628 "adult walking
            behavior" evidence=IEA] [GO:0008242 "omega peptidase activity"
            evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0019896
            "axon transport of mitochondrion" evidence=IEA] [GO:0030424 "axon"
            evidence=IEA] [GO:0031694 "alpha-2A adrenergic receptor binding"
            evidence=IEA] [GO:0042755 "eating behavior" evidence=IEA]
            [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043130
            "ubiquitin binding" evidence=IEA] [GO:0043407 "negative regulation
            of MAP kinase activity" evidence=IEA] [GO:0048747 "muscle fiber
            development" evidence=IEA] [GO:0050905 "neuromuscular process"
            evidence=IEA] InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707
            PROSITE:PS00140 GO:GO:0005829 GO:GO:0005886 GO:GO:0005634
            GO:GO:0006950 GO:GO:0008283 GO:GO:0030424 GO:GO:0043025
            GO:GO:0019896 GO:GO:0043407 GO:GO:0006511 GO:GO:0004197
            GO:GO:0008242 GO:GO:0016579 GO:GO:0004221 Gene3D:3.40.532.10
            PANTHER:PTHR10589 GeneTree:ENSGT00510000046640 OMA:SAKICRQ
            EMBL:AADN02031230 IPI:IPI00595105 Ensembl:ENSGALT00000023065
            ArrayExpress:F1NIT5 Uniprot:F1NIT5
        Length = 225

 Score = 166 (63.5 bits), Expect = 4.3e-12, P = 4.3e-12
 Identities = 48/171 (28%), Positives = 88/171 (51%)

Query:    38 EKDDRVVIKDPNPNLFFASQVINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNF 94
             ++ +++  ++ +  ++F  Q ++N+C T  ++  + N  D   +D G  L K  + T + 
Sbjct:    66 QQTEKIKDQEISSKVYFLKQTVSNSCGTIGLIHAVANNKDKVKLDEGSALKKFLDETADL 125

Query:    95 PPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELD 153
              PE +     N+ AI+  HNS A       +E +   +D+ V +HFI +  VDG LYELD
Sbjct:   126 SPEERAKRFANNKAIQEVHNSVA-------QEGQCRVEDNSVNFHFILFANVDGHLYELD 178

Query:   154 GLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKN 204
             G    P++ G  +    D+  L+    + ++  ER  K E+RF+ +A  K+
Sbjct:   179 GRLPFPVNHGTSSD---DL-LLKDSAKICRQFTER-EKGEVRFSAVAFCKS 224


>UNIPROTKB|L7N069 [details] [associations]
            symbol:UCHL3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] GeneTree:ENSGT00510000046640 EMBL:AAEX03013251
            Ensembl:ENSCAFT00000008127 Uniprot:L7N069
        Length = 218

 Score = 165 (63.1 bits), Expect = 5.6e-12, P = 5.6e-12
 Identities = 50/153 (32%), Positives = 74/153 (48%)

Query:    23 RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQVINNACATQAILSILLN 74
             RPV  ++ LF    K+     ++   IK    D   +++F  Q I+NAC T  ++  + N
Sbjct:    11 RPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIAN 70

Query:    75 CPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAG 131
               D    + G  L K  E + +  PE +   + N DAIR  H + A        + +A  
Sbjct:    71 NKDKMHFESGSTLKKFLEESVSMSPEERARYLENYDAIRVTHETSAHEG-----QTEAPS 125

Query:   132 KDDDV-YHFISYIPVDGVLYELDGLKEGPISLG 163
              D+ V  HFI+ + VDG LYELDG K  PI+ G
Sbjct:   126 IDEKVDLHFIALVHVDGHLYELDGRKPFPINHG 158


>UNIPROTKB|Q6SEG5 [details] [associations]
            symbol:UCHL1 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L1" species:9823 "Sus scrofa" [GO:0005789 "endoplasmic reticulum
            membrane" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707
            PROSITE:PS00140 GO:GO:0005789 GO:GO:0016874 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589
            MEROPS:C12.001 CTD:7345 HOVERGEN:HBG075483 KO:K05611 EMBL:AY459532
            RefSeq:NP_998928.1 UniGene:Ssc.2073 ProteinModelPortal:Q6SEG5
            SMR:Q6SEG5 STRING:Q6SEG5 GeneID:396637 KEGG:ssc:396637
            eggNOG:opiNOG07658 Uniprot:Q6SEG5
        Length = 223

 Score = 164 (62.8 bits), Expect = 7.2e-12, P = 7.2e-12
 Identities = 52/162 (32%), Positives = 82/162 (50%)

Query:    46 KDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLA 102
             ++ +P ++F  Q I N+C T  ++  + N  D     + S LK+F   T+   PE +   
Sbjct:    73 QEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKC 132

Query:   103 INNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPIS 161
                ++AI+AAH++ A+      E Q     DD V +HFI +  VDG LYELDG    P++
Sbjct:   133 FEKNEAIQAAHDAVAQ------EGQCRV--DDKVNFHFILFNNVDGHLYELDGRMPFPVN 184

Query:   162 LGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 203
                  G   +   LQ    V +E  ER  + E+RF+ +A+ K
Sbjct:   185 ----HGASSEDSLLQDAAKVCREFTER-EQGEVRFSAVALCK 221


>ZFIN|ZDB-GENE-050522-158 [details] [associations]
            symbol:uchl3 "ubiquitin carboxyl-terminal esterase
            L3 (ubiquitin thiolesterase)" species:7955 "Danio rerio"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IMP]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140
            ZFIN:ZDB-GENE-050522-158 GO:GO:0007219 GO:GO:0005622 GO:GO:0006511
            GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589 eggNOG:NOG327708
            GeneTree:ENSGT00510000046640 HOGENOM:HOG000182400 KO:K05609
            OMA:VIEHYIC HOVERGEN:HBG075483 CTD:7347 OrthoDB:EOG4HX51V
            MEROPS:C12.003 EMBL:CR536604 EMBL:BC095087 IPI:IPI00511834
            RefSeq:NP_001019576.1 UniGene:Dr.47891 SMR:Q504C0
            Ensembl:ENSDART00000104322 GeneID:554104 KEGG:dre:554104
            InParanoid:Q504C0 NextBio:20880671 Uniprot:Q504C0
        Length = 230

 Score = 166 (63.5 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 59/194 (30%), Positives = 96/194 (49%)

Query:    23 RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQVINNACATQAILSILLN 74
             RPV  ++ LF    K+    +++   IK    + + +++F  Q I NAC T  ++  + N
Sbjct:    47 RPVCAVLLLFPITEKYETFRQEEEAKIKGQGQEVSSDVYFMKQTIGNACGTIGLIHAVAN 106

Query:    75 CPDIDIGPEL-SKLKEF---TKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAA 130
               +  +  EL S LK F   +    PE K   +   ++IR  H S A+       + +A 
Sbjct:   107 NQN-HLEFELNSPLKTFLLQSAKMSPEEKAAFLEKDESIRVTHESSAQEG-----QTEAP 160

Query:   131 GKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERY 189
             G D+ V  HFI+++ VDG LYELDG K  PI  G  T    +  +L+    V ++ + R 
Sbjct:   161 GLDEKVDLHFIAFVNVDGHLYELDGRKPFPIVHGKTT----EDTFLEDSAEVCKKFMAR- 215

Query:   190 SKSEIRFNLMAVIK 203
                E+RF ++A+ K
Sbjct:   216 DPQELRFTVVALSK 229


>DICTYBASE|DDB_G0282007 [details] [associations]
            symbol:uch1 "ubiquitin C-terminal hydrolase"
            species:44689 "Dictyostelium discoideum" [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] InterPro:IPR001578 Pfam:PF01088
            PRINTS:PR00707 dictyBase:DDB_G0282007 GO:GO:0005737
            GenomeReviews:CM000152_GR GO:GO:0008234 GO:GO:0006511
            EMBL:AAFI02000044 GO:GO:0004221 Gene3D:3.40.532.10
            PANTHER:PTHR10589 HSSP:P15374 eggNOG:NOG327708 KO:K05609
            OMA:QTEAPNI RefSeq:XP_640403.1 ProteinModelPortal:Q54T48
            STRING:Q54T48 MEROPS:C12.A11 EnsemblProtists:DDB0304593
            GeneID:8623358 KEGG:ddi:DDB_G0282007 ProtClustDB:CLSZ2729025
            Uniprot:Q54T48
        Length = 255

 Score = 169 (64.5 bits), Expect = 4.8e-11, P = 4.8e-11
 Identities = 53/174 (30%), Positives = 85/174 (48%)

Query:    52 LFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLAINNSDA 108
             ++F  Q I NAC T  ++  +LN  ++    E    K+F   T +   E + +++  +  
Sbjct:    92 VYFMKQYIGNACGTIGVIHSVLNNANVIEFNENGFFKQFLDKTTSLSTEERAISLLKNSE 151

Query:   109 IRAAHN-SFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTG 167
             I  +H  S  + +  VP+E +       V HF+S++ VDG LYELDG K   I+ G  + 
Sbjct:   152 IEKSHEISALQGQSNVPQEDEPV-----VLHFVSFVHVDGHLYELDGRKPFAINHGESSA 206

Query:   168 GQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRE 221
                  D   ++Q +I E        EIRFNLM ++K   E   +E +E + K E
Sbjct:   207 ETLLKDTANVLQKMIDE-----DPKEIRFNLMGLVKKPNE--ESEEEEEKEKEE 253


>UNIPROTKB|P09936 [details] [associations]
            symbol:UCHL1 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L1" species:9606 "Homo sapiens" [GO:0008219 "cell death"
            evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0006950 "response to stress" evidence=IEA] [GO:0007412 "axon
            target recognition" evidence=IEA] [GO:0007628 "adult walking
            behavior" evidence=IEA] [GO:0008283 "cell proliferation"
            evidence=IEA] [GO:0019233 "sensory perception of pain"
            evidence=IEA] [GO:0019896 "axon transport of mitochondrion"
            evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0042755 "eating
            behavior" evidence=IEA] [GO:0043025 "neuronal cell body"
            evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IEA]
            [GO:0050905 "neuromuscular process" evidence=IEA] [GO:0005789
            "endoplasmic reticulum membrane" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISS;IDA;TAS] [GO:0008242 "omega peptidase
            activity" evidence=IDA] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=IDA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=TAS] [GO:0016579 "protein deubiquitination"
            evidence=IDA] [GO:0043130 "ubiquitin binding" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0031694 "alpha-2A
            adrenergic receptor binding" evidence=IPI] [GO:0005886 "plasma
            membrane" evidence=IDA] [GO:0043407 "negative regulation of MAP
            kinase activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001578
            Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140 GO:GO:0005634
            GO:GO:0005737 Pathway_Interaction_DB:alphasynuclein_pathway
            GO:GO:0005789 GO:GO:0016874 GO:GO:0008219 GO:GO:0043407
            GO:GO:0006511 EMBL:CH471069 GO:GO:0043130 GO:GO:0004197
            Orphanet:2828 GO:GO:0008242 GO:GO:0016579 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 EMBL:AC095043 PDB:3IFW
            PDB:3KVF PDB:3KW5 PDBsum:3IFW PDBsum:3KVF PDBsum:3KW5
            eggNOG:NOG327708 HOGENOM:HOG000182400 BRENDA:3.1.2.15
            MEROPS:C12.001 CTD:7345 HOVERGEN:HBG075483 KO:K05611
            OrthoDB:EOG4RJG2F EMBL:BC000332 EMBL:BC005117 EMBL:BC006305
            EMBL:X17377 EMBL:X04741 EMBL:AH007277 IPI:IPI00018352 PIR:A25856
            RefSeq:NP_004172.2 UniGene:Hs.518731 PDB:2ETL PDB:2LEN PDB:3IRT
            PDB:4DM9 PDBsum:2ETL PDBsum:2LEN PDBsum:3IRT PDBsum:4DM9
            ProteinModelPortal:P09936 SMR:P09936 DIP:DIP-36620N IntAct:P09936
            MINT:MINT-1378022 STRING:P09936 PhosphoSite:P09936 DMDM:136681
            DOSAC-COBS-2DPAGE:P09936 UCD-2DPAGE:P09936 PaxDb:P09936
            PeptideAtlas:P09936 PRIDE:P09936 DNASU:7345 Ensembl:ENST00000284440
            Ensembl:ENST00000503431 GeneID:7345 KEGG:hsa:7345 UCSC:uc003gvo.3
            GeneCards:GC04P041174 HGNC:HGNC:12513 HPA:CAB002580 HPA:HPA005993
            MIM:191342 MIM:613643 neXtProt:NX_P09936 PharmGKB:PA37160
            InParanoid:P09936 PhylomeDB:P09936 BindingDB:P09936
            ChEMBL:CHEMBL6159 ChiTaRS:UCHL1 EvolutionaryTrace:P09936
            GenomeRNAi:7345 NextBio:28756 ArrayExpress:P09936 Bgee:P09936
            CleanEx:HS_UCHL1 Genevestigator:P09936 GermOnline:ENSG00000154277
            Uniprot:P09936
        Length = 223

 Score = 161 (61.7 bits), Expect = 6.3e-11, P = 6.3e-11
 Identities = 53/163 (32%), Positives = 84/163 (51%)

Query:    46 KDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPEL-SKLKEF---TKNFPPELKGL 101
             ++ +P ++F  Q I N+C T  ++  + N  D  +G E  S LK+F   T+   PE +  
Sbjct:    73 QEVSPKVYFMKQTIGNSCGTIGLIHAVANNQD-KLGFEDGSVLKQFLSETEKMSPEDRAK 131

Query:   102 AINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPI 160
                 ++AI+AAH++ A+      E Q     DD V +HFI +  VDG LYELDG    P+
Sbjct:   132 CFEKNEAIQAAHDAVAQ------EGQCRV--DDKVNFHFILFNNVDGHLYELDGRMPFPV 183

Query:   161 SLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 203
             +     G   +   L+    V +E  ER  + E+RF+ +A+ K
Sbjct:   184 N----HGASSEDTLLKDAAKVCREFTER-EQGEVRFSAVALCK 221


>TAIR|locus:2129151 [details] [associations]
            symbol:UCH3 "ubiquitin C-terminal hydrolase 3"
            species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA;ISS] [GO:0005622
            "intracellular" evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA;ISS] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0005829 "cytosol" evidence=IDA]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 GO:GO:0005829
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006511 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 HSSP:P15374 eggNOG:NOG327708
            HOGENOM:HOG000182400 KO:K05609 OMA:QTEAPNI MEROPS:C12.A03
            EMBL:BT005488 EMBL:AK118904 IPI:IPI00525054 RefSeq:NP_193484.1
            UniGene:At.32991 ProteinModelPortal:Q8GWE1 SMR:Q8GWE1 PaxDb:Q8GWE1
            PRIDE:Q8GWE1 EnsemblPlants:AT4G17510.1 GeneID:827466
            KEGG:ath:AT4G17510 TAIR:At4g17510 InParanoid:Q8GWE1
            PhylomeDB:Q8GWE1 ProtClustDB:CLSN2685985 Genevestigator:Q8GWE1
            Uniprot:Q8GWE1
        Length = 234

 Score = 164 (62.8 bits), Expect = 7.9e-11, P = 7.9e-11
 Identities = 58/190 (30%), Positives = 89/190 (46%)

Query:    23 RPVYGLIFLFKWRPGEKDDRVV----IKDP--NPNLFFASQVINNACATQAILSILLNCP 76
             +PV  ++FL+      +++R+     IK+   +  ++F  Q + NAC T  +L  + N  
Sbjct:    55 KPVLAVLFLYPITKKSEEERIEQDKEIKEKVHSDKVYFMKQTVGNACGTIGLLHAIGNIT 114

Query:    77 -DIDI--GPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKD 133
              +I +  G  L +  + T N  P  +   + N   I  AH S A     V      A +D
Sbjct:   115 SEIKLSDGSFLDRFFKSTANMTPMERAKFLENDSQIEDAH-SVA-----VIAGDTPASED 168

Query:   134 DDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSE 193
              D  HFI    V+G LYELDG K GPIS     G       L+    VI++ IE+ +   
Sbjct:   169 ADT-HFICLACVEGELYELDGRKAGPIS----HGASSPATLLKDATKVIKKMIEK-NPGS 222

Query:   194 IRFNLMAVIK 203
             + FNL+A+ K
Sbjct:   223 LNFNLIAISK 232


>UNIPROTKB|P23356 [details] [associations]
            symbol:UCHL1 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L1" species:9913 "Bos taurus" [GO:0005789 "endoplasmic reticulum
            membrane" evidence=IEA] [GO:0050905 "neuromuscular process"
            evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IEA]
            [GO:0043407 "negative regulation of MAP kinase activity"
            evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
            [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042755 "eating
            behavior" evidence=IEA] [GO:0031694 "alpha-2A adrenergic receptor
            binding" evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0019896
            "axon transport of mitochondrion" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=IEA] [GO:0008283 "cell
            proliferation" evidence=IEA] [GO:0008242 "omega peptidase activity"
            evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
            [GO:0007412 "axon target recognition" evidence=IEA] [GO:0006950
            "response to stress" evidence=IEA] [GO:0005886 "plasma membrane"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707
            PROSITE:PS00140 GO:GO:0005829 GO:GO:0005886 GO:GO:0005634
            GO:GO:0006950 GO:GO:0005789 GO:GO:0016874 GO:GO:0008283
            GO:GO:0030424 GO:GO:0043025 GO:GO:0042755 GO:GO:0050905
            GO:GO:0019896 GO:GO:0043407 GO:GO:0006511 GO:GO:0007628
            GO:GO:0004197 GO:GO:0008242 GO:GO:0016579 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 GO:GO:0007412 eggNOG:NOG327708
            GeneTree:ENSGT00510000046640 HOGENOM:HOG000182400 EMBL:BC111330
            IPI:IPI00697759 PIR:S17561 RefSeq:NP_001039637.1 UniGene:Bt.58848
            ProteinModelPortal:P23356 SMR:P23356 STRING:P23356 MEROPS:C12.001
            PRIDE:P23356 Ensembl:ENSBTAT00000046823 GeneID:514394
            KEGG:bta:514394 CTD:7345 HOVERGEN:HBG075483 InParanoid:P23356
            KO:K05611 OMA:SAKICRQ OrthoDB:EOG4RJG2F NextBio:20871312
            Uniprot:P23356
        Length = 252

 Score = 167 (63.8 bits), Expect = 8.2e-11, P = 8.2e-11
 Identities = 53/162 (32%), Positives = 84/162 (51%)

Query:    46 KDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLA 102
             ++ +P ++F  Q I N+C T  ++  + N  D     + S LK+F   T+   PE +   
Sbjct:   102 QEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKC 161

Query:   103 INNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPIS 161
                ++AI+AAH++ A+      E Q     DD V +HFI +  VDG LYELDG    P++
Sbjct:   162 FEKNEAIQAAHDAVAQ------EGQCRV--DDKVNFHFILFNNVDGHLYELDGRMPFPVN 213

Query:   162 LGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 203
              G  T  +  +  LQ    V +E  ER  + E+RF+ +A+ K
Sbjct:   214 HG--TSSEDSL--LQDAAKVCREFTER-EQGEVRFSAVALCK 250


>UNIPROTKB|E2QZE3 [details] [associations]
            symbol:UCHL1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707
            PROSITE:PS00140 GO:GO:0005622 GO:GO:0006511 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 Ensembl:ENSCAFT00000025162
            Uniprot:E2QZE3
        Length = 250

 Score = 156 (60.0 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 50/156 (32%), Positives = 80/156 (51%)

Query:    46 KDPNPNLFFASQVINNACATQAILSILLNCPD-IDIGPELSKLKEF---TKNFPPELKGL 101
             ++ +P ++F  Q I N+C T  ++  + N  D ++   + S LK+F   T+   PE +  
Sbjct:    76 QEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEEDGSVLKQFLSETEKLSPEDRAK 135

Query:   102 AINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPI 160
                 ++AI+AAH++ A+      E Q     DD V +HFI +  VDG LYELDG    P+
Sbjct:   136 CFEKNEAIQAAHDAVAQ------EGQCRV--DDKVNFHFILFNNVDGHLYELDGRMPFPV 187

Query:   161 SLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRF 196
             + G  T  +  +  LQ    V +E  ER  + E+ F
Sbjct:   188 NHG--TSSEDSL--LQDAAKVCREFTER-EQGEVLF 218


>UNIPROTKB|F1PT17 [details] [associations]
            symbol:UCHL3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043130 "ubiquitin binding" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001578 Pfam:PF01088 PROSITE:PS00140
            GO:GO:0005739 GO:GO:0005634 GO:GO:0006511 GO:GO:0008233
            GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589
            GeneTree:ENSGT00510000046640 EMBL:AAEX03013252 EMBL:AAEX03013251
            Ensembl:ENSCAFT00000038963 Uniprot:F1PT17
        Length = 228

 Score = 98 (39.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
 Identities = 23/75 (30%), Positives = 37/75 (49%)

Query:    46 KDPNPNLFFASQVINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLA 102
             +D   +++F  Q I+NAC T  ++  + N  D    + G  L K  E + +  PE +   
Sbjct:    12 QDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESVSMSPEERARY 71

Query:   103 INNSDAIRAAHNSFA 117
             + N DAIR  H + A
Sbjct:    72 LENYDAIRVTHETSA 86

 Score = 95 (38.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
 Identities = 28/70 (40%), Positives = 40/70 (57%)

Query:   133 DDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSK 191
             D+ V  HFI+ + VDG LYELDG K  PI+ G  +    D   L+    V ++ +ER   
Sbjct:   161 DEKVDLHFIALVHVDGHLYELDGRKPFPINHGETS----DETLLEDAIEVCKKFMER-DP 215

Query:   192 SEIRFNLMAV 201
              E+RFN +A+
Sbjct:   216 DELRFNAIAL 225


>UNIPROTKB|Q5TBK7 [details] [associations]
            symbol:UCHL3 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L3" species:9606 "Homo sapiens" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001578 Pfam:PF01088
            PROSITE:PS00140 GO:GO:0005622 GO:GO:0006511 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 EMBL:AL137244
            HOGENOM:HOG000182400 HOVERGEN:HBG075483 UniGene:Hs.162241
            HGNC:HGNC:12515 ChiTaRS:UCHL3 SMR:Q5TBK7 Ensembl:ENST00000419068
            Uniprot:Q5TBK7
        Length = 228

 Score = 98 (39.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
 Identities = 23/75 (30%), Positives = 37/75 (49%)

Query:    46 KDPNPNLFFASQVINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLA 102
             +D   +++F  Q I+NAC T  ++  + N  D    + G  L K  E + +  PE +   
Sbjct:    12 QDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESVSMSPEERARY 71

Query:   103 INNSDAIRAAHNSFA 117
             + N DAIR  H + A
Sbjct:    72 LENYDAIRVTHETSA 86

 Score = 95 (38.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
 Identities = 28/70 (40%), Positives = 40/70 (57%)

Query:   133 DDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSK 191
             D+ V  HFI+ + VDG LYELDG K  PI+ G  +    D   L+    V ++ +ER   
Sbjct:   161 DEKVDLHFIALVHVDGHLYELDGRKPFPINHGETS----DETLLEDAIEVCKKFMER-DP 215

Query:   192 SEIRFNLMAV 201
              E+RFN +A+
Sbjct:   216 DELRFNAIAL 225


>CGD|CAL0000563 [details] [associations]
            symbol:orf19.6272 species:5476 "Candida albicans" [GO:0005634
            "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 CGD:CAL0000563
            GO:GO:0005622 GO:GO:0006511 GO:GO:0004221 Gene3D:3.40.532.10
            PANTHER:PTHR10589 EMBL:AACQ01000037 KO:K05609 RefSeq:XP_718859.1
            ProteinModelPortal:Q5AAX7 STRING:Q5AAX7 GeneID:3639558
            KEGG:cal:CaO19.6272 Uniprot:Q5AAX7
        Length = 258

 Score = 146 (56.5 bits), Expect = 4.6e-08, P = 4.6e-08
 Identities = 50/164 (30%), Positives = 80/164 (48%)

Query:    47 DPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINN- 105
             D N ++ +  Q I N C   A+L IL N P  D+    SKL +   N   ++K  +I++ 
Sbjct:    90 DNNNDIGWFKQTIGNGCGLYALLHILTNLPQ-DLIISNSKLSQLRNNLT-KVKEFSIDDR 147

Query:   106 SDAIRAAHNSFARPEPFVPE-EQKAAGKDDDV-YHFISYIPV--DGVLYELDGLKEGPIS 161
             +  I    N     E F  + + KA   ++ V  HFIS+I    +G LYELDG + GPI 
Sbjct:   148 AKIIENLENDIKLDENFGEKGDTKAPDINESVDLHFISFIKSTKNGHLYELDGRRTGPID 207

Query:   162 LGPCTGGQGDMDWLQMVQ-PVIQERIERY--SKSEIRFNLMAVI 202
             LG       + +   ++  P++ E+I+ Y  +  E   N  A++
Sbjct:   208 LGESNNKDNNNNNNNIINDPLLIEKIQFYIDNADEANKNNFAIM 251


>UNIPROTKB|D6R956 [details] [associations]
            symbol:UCHL1 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L1" species:9606 "Homo sapiens" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 PROSITE:PS00140
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006511 GO:GO:0004221
            Gene3D:3.40.532.10 PANTHER:PTHR10589 EMBL:AC095043
            HOGENOM:HOG000182400 HGNC:HGNC:12513 ChiTaRS:UCHL1 IPI:IPI00967387
            ProteinModelPortal:D6R956 SMR:D6R956 Ensembl:ENST00000512788
            OMA:AMEINPE ArrayExpress:D6R956 Bgee:D6R956 Uniprot:D6R956
        Length = 241

 Score = 143 (55.4 bits), Expect = 7.8e-08, P = 7.8e-08
 Identities = 43/123 (34%), Positives = 66/123 (53%)

Query:    46 KDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPEL-SKLKEF---TKNFPPELKGL 101
             ++ +P ++F  Q I N+C T  ++  + N  D  +G E  S LK+F   T+   PE +  
Sbjct:    73 QEVSPKVYFMKQTIGNSCGTIGLIHAVANNQD-KLGFEDGSVLKQFLSETEKMSPEDRAK 131

Query:   102 AINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPI 160
                 ++AI+AAH++ A+      E Q     DD V +HFI +  VDG LYELDG    P+
Sbjct:   132 CFEKNEAIQAAHDAVAQ------EGQCRV--DDKVNFHFILFNNVDGHLYELDGRMPFPV 183

Query:   161 SLG 163
             + G
Sbjct:   184 NHG 186


>UNIPROTKB|I3L7W1 [details] [associations]
            symbol:UCHL1 "Ubiquitin carboxyl-terminal hydrolase isozyme
            L1" species:9823 "Sus scrofa" [GO:0050905 "neuromuscular process"
            evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IEA]
            [GO:0043407 "negative regulation of MAP kinase activity"
            evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
            [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042755 "eating
            behavior" evidence=IEA] [GO:0031694 "alpha-2A adrenergic receptor
            binding" evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0019896
            "axon transport of mitochondrion" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=IEA] [GO:0008283 "cell
            proliferation" evidence=IEA] [GO:0008242 "omega peptidase activity"
            evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
            [GO:0007412 "axon target recognition" evidence=IEA] [GO:0006950
            "response to stress" evidence=IEA] [GO:0005886 "plasma membrane"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001578 Pfam:PF01088
            PRINTS:PR00707 PROSITE:PS00140 GO:GO:0005829 GO:GO:0005886
            GO:GO:0005634 GO:GO:0006950 GO:GO:0008283 GO:GO:0030424
            GO:GO:0043025 GO:GO:0042755 GO:GO:0050905 GO:GO:0019896
            GO:GO:0043407 GO:GO:0006511 GO:GO:0007628 GO:GO:0004197
            GO:GO:0008242 GO:GO:0016579 GO:GO:0004221 Gene3D:3.40.532.10
            PANTHER:PTHR10589 GO:GO:0007412 GeneTree:ENSGT00510000046640
            OMA:AMEINPE EMBL:CU681820 EMBL:AEMK01196757 EMBL:CU896624
            Ensembl:ENSSSCT00000024016 Uniprot:I3L7W1
        Length = 225

 Score = 138 (53.6 bits), Expect = 2.2e-07, P = 2.2e-07
 Identities = 49/162 (30%), Positives = 78/162 (48%)

Query:    46 KDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLA 102
             ++ +P ++F  Q I N+C T  ++  + N  D     + S LK+F   T+   PE +   
Sbjct:    74 QEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKC 133

Query:   103 INNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPIS 161
                ++AI+AAH++ A+      E Q     DD V +HFI +  VDG LYEL      P+ 
Sbjct:   134 FEKNEAIQAAHDAVAQ------EGQCRV--DDKVNFHFILFNNVDGHLYELGKRIAQPVQ 185

Query:   162 LGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 203
                  G +      Q    V +E  ER  + E+RF+ +A+ K
Sbjct:   186 ---DEGTEVQRSLSQDAAKVCREFTER-EQGEVRFSAVALCK 223


>ASPGD|ASPL0000069720 [details] [associations]
            symbol:AN7491 species:162425 "Emericella nidulans"
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707
            PROSITE:PS00140 GO:GO:0005622 EMBL:AACD01000129 EMBL:BN001304
            GO:GO:0006511 GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589
            eggNOG:NOG327708 HOGENOM:HOG000182400 KO:K05609 OrthoDB:EOG4FR41W
            RefSeq:XP_680760.1 STRING:Q5AW39 EnsemblFungi:CADANIAT00000585
            GeneID:2869381 KEGG:ani:AN7491.2 OMA:RSEGANW Uniprot:Q5AW39
        Length = 249

 Score = 125 (49.1 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 43/162 (26%), Positives = 79/162 (48%)

Query:    48 PNPNLFFASQVINNACATQAILSILLNCP---DIDIGPELSKLKEFTKNFPPELKGLAIN 104
             PN  + +  Q I NAC    +L  + N      I  G +L  L +  +   P  +   + 
Sbjct:    89 PNEPVMWFKQTIRNACGLIGLLHAVSNGEARKHILPGSDLENLLKEAEKLDPIRRADLLY 148

Query:   105 NSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIP-VDGVLYELDGLKEGPISL 162
              S A+ +AH   A+       + KA G +DDV  HF++++   DG L+ELDG + GP+  
Sbjct:   149 ESKALESAHADAAKLG-----DTKAPGAEDDVDLHFVAFVKGEDGRLWELDGRRRGPLER 203

Query:   163 GPCTGGQGDMDWLQMVQPVIQERIERYSKS---EIRFNLMAV 201
             G   G + D    + ++  ++  ++  +K    ++RF+L+++
Sbjct:   204 G-VLGDEEDALSERALELGVRRFLDVEAKGGNPDLRFSLVSL 244


>POMBASE|SPAC27F1.03c [details] [associations]
            symbol:uch1 "ubiquitin C-terminal hydrolase Uch1"
            species:4896 "Schizosaccharomyces pombe" [GO:0000502 "proteasome
            complex" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISM] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IDA] InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707
            PROSITE:PS00140 PomBase:SPAC27F1.03c GO:GO:0005829 GO:GO:0005634
            EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0000502 GO:GO:0006511
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 Gene3D:3.40.532.10
            PANTHER:PTHR10589 eggNOG:NOG327708 HOGENOM:HOG000182400 KO:K05609
            OrthoDB:EOG4FR41W PIR:T38461 RefSeq:NP_594531.1
            ProteinModelPortal:Q10171 STRING:Q10171 MEROPS:C12.A10
            EnsemblFungi:SPAC27F1.03c.1 GeneID:2541733 KEGG:spo:SPAC27F1.03c
            OMA:RHEGHEA NextBio:20802824 Uniprot:Q10171
        Length = 222

 Score = 122 (48.0 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 48/174 (27%), Positives = 78/174 (44%)

Query:    23 RPVYGLIFLFKWRPGE---KDDRVVIKDPNPNLFFASQVINNACATQAILSILLNCP--- 76
             RPV+ L+F+F     +   K  R++ KD +  L++  Q I NAC T  +L  + N     
Sbjct:    41 RPVHALLFVFPSSGTKTIYKGSRILPKDSDKVLWYP-QTIPNACGTIGLLHAVSNGELRR 99

Query:    77 DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV 136
              ++    +  L    +    E +   I +S  + A H +FA P P   E     G ++DV
Sbjct:   100 KVNENDFIKSLIRTAEGSSIEERAKLIEDSKELEALHAAFAGP-PLEVE-----GSEEDV 153

Query:   137 ---YHFISYIPV----DGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQ 183
                 HFI ++      D   YELDG +EGP+          + + L +++  IQ
Sbjct:   154 ETDLHFICFVKGKSKDDNHFYELDGRQEGPVQHSEIESDLLNAEVLSVIKNYIQ 207


>WB|WBGene00006721 [details] [associations]
            symbol:ubh-1 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001578 Pfam:PF01088 PRINTS:PR00707 GO:GO:0005622
            GO:GO:0006511 GO:GO:0004221 Gene3D:3.40.532.10 PANTHER:PTHR10589
            HSSP:P15374 eggNOG:NOG327708 GeneTree:ENSGT00510000046640
            HOGENOM:HOG000182400 KO:K05609 OMA:QTEAPNI EMBL:FO081394 PIR:T33964
            RefSeq:NP_504654.1 ProteinModelPortal:Q9UAV3 SMR:Q9UAV3
            MEROPS:C12.A06 PaxDb:Q9UAV3 EnsemblMetazoa:F46E10.8 GeneID:179039
            KEGG:cel:CELE_F46E10.8 UCSC:F46E10.8 CTD:179039 WormBase:F46E10.8
            InParanoid:Q9UAV3 NextBio:903634 Uniprot:Q9UAV3
        Length = 216

 Score = 114 (45.2 bits), Expect = 0.00016, P = 0.00016
 Identities = 41/158 (25%), Positives = 69/158 (43%)

Query:    46 KDPNPNLFFASQVINNACATQAILSILLNCPD-IDIGPELSKLKEFTKNFPPELKGLAIN 104
             K  + ++FF  Q I+NAC T A+   L N  D I++G        F K +  E K + I 
Sbjct:    69 KAADDSVFFMKQKISNACGTFALFHSLANLEDRINLGDG-----SFAK-WLAEAKKVGIE 122

Query:   105 NSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGP 164
                   A +   A        + + A   D  +HFI ++  +G+LYE+D  +     +GP
Sbjct:   123 ERSDFLANNAELAGIHAAAATDGQTAPSGDVEHHFICFVGKNGILYEIDSRRPFAREIGP 182

Query:   165 CTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVI 202
              +    D   ++      Q  IE+     + F+ +AV+
Sbjct:   183 TS----DATLVKDAGAACQHLIEKLDN--VSFSAIAVV 214


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.136   0.390    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      315       301   0.00096  115 3  11 22  0.41    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  91
  No. of states in DFA:  598 (64 KB)
  Total size of DFA:  197 KB (2112 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.92u 0.09s 30.01t   Elapsed:  00:00:01
  Total cpu time:  29.93u 0.09s 30.02t   Elapsed:  00:00:01
  Start:  Sat May 11 09:09:18 2013   End:  Sat May 11 09:09:19 2013

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