BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021248
(315 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XSJ0|UCHL5_BOVIN Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Bos taurus
GN=UCHL5 PE=2 SV=1
Length = 328
Score = 301 bits (770), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 155/316 (49%), Positives = 216/316 (68%), Gaps = 26/316 (8%)
Query: 3 VKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINN 61
+G QVEE++SL+ ++ L+PV+GLIFLFKW+PGE+ V++D +FFA QVINN
Sbjct: 27 CRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINN 86
Query: 62 ACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARP 119
ACATQAI+S+LLNC D+ +G LS+ KEF+++F +KGLA++NSD IR HNSFAR
Sbjct: 87 ACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQ 146
Query: 120 EPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQ 179
+ F + K A K++D +HF+SY+PV+G LYELDGL+EGPI LG C DW+ V+
Sbjct: 147 QMF-EFDAKTAAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD----DWISAVR 201
Query: 180 PVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKT 239
PVI++RI++YS+ EIRFNLMA++ +RK +Y ++ E QR+ L E M
Sbjct: 202 PVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQ----------LAEEPMDTDQ 251
Query: 240 SFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRRKHNYIPFLFNFLKILAEK 297
L+ SEV A ++L+EEE K K+++ ENIRRKHNY+PF+ LK LAE
Sbjct: 252 GSNMLSAIQSEV------AKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEH 305
Query: 298 KQLKPLIEKAKQKTSS 313
+QL PL+EKAK+K ++
Sbjct: 306 QQLIPLVEKAKEKQNA 321
>sp|Q9WUP7|UCHL5_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Mus musculus
GN=Uchl5 PE=2 SV=2
Length = 329
Score = 300 bits (768), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 157/316 (49%), Positives = 217/316 (68%), Gaps = 25/316 (7%)
Query: 3 VKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINN 61
+G QVEE++SL+ +S L+PV+GLIFLFKW+PGE+ V++D +FFA QVINN
Sbjct: 27 CRGAQVEEIWSLEPESFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLETIFFAKQVINN 86
Query: 62 ACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARP 119
ACATQAI+S+LLNC D+ +G LS+ KEF+++F +KGLA++NSD IR HNSFAR
Sbjct: 87 ACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQ 146
Query: 120 EPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQ 179
+ F + K K++D +HF+SY+PV+G LYELDGL+EGPI LG C DW+ V+
Sbjct: 147 QMF-EFDTKTPAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD----DWITAVR 201
Query: 180 PVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKT 239
PVI++RI++YS+ EIRFNLMA++ +RK +Y ++ E QR QLA + E M
Sbjct: 202 PVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR-------QLA--EEEPMDTDQ 252
Query: 240 SFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRRKHNYIPFLFNFLKILAEK 297
L+ SEV A ++L+EEE K K+++ ENIRRKHNY+PF+ LK LAE
Sbjct: 253 GSTVLSAIQSEV------ARNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEH 306
Query: 298 KQLKPLIEKAKQKTSS 313
+QL PL+EKAK+K ++
Sbjct: 307 QQLIPLVEKAKEKQNA 322
>sp|Q06AT3|UCHL5_PIG Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Sus scrofa
GN=UCHL5 PE=2 SV=1
Length = 329
Score = 300 bits (767), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/316 (49%), Positives = 218/316 (68%), Gaps = 25/316 (7%)
Query: 3 VKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINN 61
+G QVEE++SL+ ++ L+PV+GLIFLFKW+PGE+ V++D +FFA QVINN
Sbjct: 27 CRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINN 86
Query: 62 ACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARP 119
ACATQAI+S+LLNC D+ +G LS+ KEF+++F +KGLA++NSD IR HNSFAR
Sbjct: 87 ACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQ 146
Query: 120 EPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQ 179
+ F + K + K++D +HF+SY+PV+G LYELDGL+EGPI LG C DW+ V+
Sbjct: 147 QMF-EFDAKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD----DWISAVR 201
Query: 180 PVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKT 239
PVI++RI++YS+ EIRFNLMA++ +RK +Y ++ E QR QLA + E M
Sbjct: 202 PVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR-------QLA--EEEPMDTDQ 252
Query: 240 SFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRRKHNYIPFLFNFLKILAEK 297
L+ SEV A ++L+EEE K K+++ ENIRRKHNY+PF+ LK LAE
Sbjct: 253 GSNMLSAIQSEV------AKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEH 306
Query: 298 KQLKPLIEKAKQKTSS 313
+QL PL+EKAK+K ++
Sbjct: 307 QQLIPLVEKAKEKQNA 322
>sp|Q9Y5K5|UCHL5_HUMAN Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Homo sapiens
GN=UCHL5 PE=1 SV=3
Length = 329
Score = 300 bits (767), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 154/316 (48%), Positives = 219/316 (69%), Gaps = 25/316 (7%)
Query: 3 VKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINN 61
+G QVEE++SL+ ++ L+PV+GLIFLFKW+PGE+ V++D +FFA QVINN
Sbjct: 27 CRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINN 86
Query: 62 ACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARP 119
ACATQAI+S+LLNC D+ +G LS+ KEF+++F +KGLA++NSD IR HNSFAR
Sbjct: 87 ACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQ 146
Query: 120 EPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQ 179
+ F + K + K++D +HF+SY+PV+G LYELDGL+EGPI LG C DW+ V+
Sbjct: 147 QMF-EFDTKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD----DWISAVR 201
Query: 180 PVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKT 239
PVI++RI++YS+ EIRFNLMA++ +RK +Y ++ E QR+ L E +D
Sbjct: 202 PVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQ----------LAEEEPMDT- 250
Query: 240 SFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRRKHNYIPFLFNFLKILAEK 297
+ N LS + + E A ++L+EEE K K+++ ENIRRKHNY+PF+ LK LAE
Sbjct: 251 --DQGNSMLSAIQS--EVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEH 306
Query: 298 KQLKPLIEKAKQKTSS 313
+QL PL+EKAK+K ++
Sbjct: 307 QQLIPLVEKAKEKQNA 322
>sp|Q54N38|UCHL5_DICDI Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Dictyostelium
discoideum GN=uch2 PE=3 SV=1
Length = 343
Score = 295 bits (754), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 157/319 (49%), Positives = 211/319 (66%), Gaps = 17/319 (5%)
Query: 3 VKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINNA 62
VK +QVEELY+LD + L+PV GLIFLFKW E+++R + N N+FFA+QVI NA
Sbjct: 26 VKDIQVEELYTLDSSEYDRLKPVLGLIFLFKWEK-EEENRTI--SDNENIFFANQVIQNA 82
Query: 63 CATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPF 122
CATQAILS+LLN I++G ELS K F +FPP +KG AI NS+ I+ HNSF +PF
Sbjct: 83 CATQAILSVLLNSEGIELGEELSNFKSFVGDFPPMMKGEAIGNSELIKETHNSFTVQDPF 142
Query: 123 VPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVI 182
+ ++K K D +HFIS+IP G +YELDGLK+GP LG CT +WL++ P I
Sbjct: 143 IFSKKKNR-KPSDAFHFISFIPFQGKVYELDGLKKGPYCLGDCTPD----NWLEIATPFI 197
Query: 183 QERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDK---- 238
Q+R+E+YS+ EIRFNLMAVIKNR+ ++ ++K+ + +L+ L S D
Sbjct: 198 QKRMEKYSQGEIRFNLMAVIKNRQTTLQEKILTLEKKKNDLEIKLSELNSGSGGDNKEES 257
Query: 239 -----TSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKI 293
T+ E LN ++ VN IE A +ILME+EKF+ W+ ENIRRKHN+ P + N +K
Sbjct: 258 GGATPTTKEDLNFMINVVNNDIEEANNEILMEQEKFRNWKDENIRRKHNFTPLILNLIKG 317
Query: 294 LAEKKQLKPLIEKAKQKTS 312
LAEK L+PLI+KAK + S
Sbjct: 318 LAEKDNLQPLIQKAKDQIS 336
>sp|Q9UUB6|UBLH2_SCHPO Ubiquitin carboxyl-terminal hydrolase 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=uch2 PE=1 SV=1
Length = 300
Score = 233 bits (594), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/319 (42%), Positives = 180/319 (56%), Gaps = 48/319 (15%)
Query: 1 MQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPG-EKDDRVVIKDPNPNLFFASQVI 59
+ VK V+V+ELYSLD+DSL +YG+IFLFKW +K D + D N+FFA QVI
Sbjct: 20 LGVKDVEVDELYSLDVDSLRQFPDIYGIIFLFKWNSKVDKPDGTMDYDSMDNIFFAKQVI 79
Query: 60 NNACATQAILSILLNCPD-IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFAR 118
NNACATQA+LS+LLN D ID+G LS+ K+F+K PPELKG A+ NS+ IR HNSFAR
Sbjct: 80 NNACATQALLSVLLNHSDEIDLGTTLSEFKDFSKTLPPELKGEALGNSEHIRCCHNSFAR 139
Query: 119 PEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMV 178
+PF+ EE +AA +D+VYHFI+Y ++ V YELDGL+ PI+ G CT + + +
Sbjct: 140 SDPFISEEVRAATDEDEVYHFIAYTNINNVFYELDGLQAAPINHGSCTKEE----FAEKA 195
Query: 179 QPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDK 238
VIQ RI Y +EIRFNLM + K++K A L L E + D
Sbjct: 196 VSVIQARIANYDPAEIRFNLMVICKDKK----ASL----------------LTREDLTD- 234
Query: 239 TSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILA--- 295
E I +E+EK +W+ EN R+HN++ K+L
Sbjct: 235 -----------------EEKAASIAVEDEKRLRWKRENQLRRHNFVGLFVELSKLLVKDR 277
Query: 296 -EKKQLKPLIEKAKQKTSS 313
+K +E AK K +S
Sbjct: 278 IDKNTWNSTLETAKAKYAS 296
>sp|Q09444|UBH4_CAEEL Probable ubiquitin carboxyl-terminal hydrolase ubh-4
OS=Caenorhabditis elegans GN=ubh-4 PE=3 SV=2
Length = 321
Score = 224 bits (570), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 186/315 (59%), Gaps = 36/315 (11%)
Query: 3 VKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINNA 62
V G+QVEELYSLD D RP YGLIFLFKWR G D+ I N+FFA Q I NA
Sbjct: 26 VDGLQVEELYSLDDDKAMT-RPTYGLIFLFKWRQG--DETTGIPSDKQNIFFAHQTIQNA 82
Query: 63 CATQAILSILLNCPDIDI--GPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPE 120
CATQA++++L+N D D+ G L++ KEF + P +G ++NS+ IR HNSF+R
Sbjct: 83 CATQALINLLMNVEDTDVKLGNILNQYKEFAIDLDPNTRGHCLSNSEEIRTVHNSFSRQT 142
Query: 121 PFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQP 180
F E G+ +D YHF++Y+P+ +YELDGL+E P+ + Q + DW++ ++P
Sbjct: 143 LF--ELDIKGGESEDNYHFVTYVPIGNKVYELDGLRELPLEVAEF---QKEQDWIEAIKP 197
Query: 181 VIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTS 240
VIQ+R+++YS+ EI FNLMA++ NRK+ + Q E ++Q + + E +
Sbjct: 198 VIQQRMQKYSEGEITFNLMALVPNRKQ-------KLQEMMENLIQANENNELEEQI---- 246
Query: 241 FEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQL 300
LNK++++ E+ K + +R EN RR+HNY PF+ +KILA++ +L
Sbjct: 247 -ADLNKAIAD--------------EDYKMEMYRKENNRRRHNYTPFVIELMKILAKEGKL 291
Query: 301 KPLIEKAKQKTSSSS 315
L++ A Q S
Sbjct: 292 VGLVDNAYQAAKEKS 306
>sp|D3ZHS6|BAP1_RAT Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Rattus norvegicus
GN=Bap1 PE=3 SV=2
Length = 727
Score = 197 bits (502), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 116/245 (47%), Positives = 151/245 (61%), Gaps = 23/245 (9%)
Query: 3 VKGVQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK-----DDRVVIKDPNPN-L 52
VKGVQVEE+Y L PVYG IFLFKW R K DD VI D N +
Sbjct: 24 VKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNSM 80
Query: 53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
FFA Q+I N+CAT A+LS+LLNC ++D+GP LS++K+FTK F PE KG AI N+ + A
Sbjct: 81 FFAHQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKA 140
Query: 113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
HNS ARPEP +PE+Q +A + + +HF+SY+P+ G L+ELDGLK PI GP G+
Sbjct: 141 HNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPW--GE 198
Query: 170 GDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQ 225
D +W + VI ERI + E IRFNLMAV+ +R+ Y A L + R+ +L+
Sbjct: 199 -DEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRVKYEARLHVLKGNRQTVLE 257
Query: 226 QLASL 230
L L
Sbjct: 258 ALQQL 262
Score = 38.9 bits (89), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 260 EKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
E L EE EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 645 EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQ 692
>sp|Q92560|BAP1_HUMAN Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Homo sapiens GN=BAP1
PE=1 SV=2
Length = 729
Score = 196 bits (498), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/245 (47%), Positives = 150/245 (61%), Gaps = 23/245 (9%)
Query: 3 VKGVQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK-----DDRVVIKDP-NPNL 52
VKGVQVEE+Y L PVYG IFLFKW R K DD VI D N+
Sbjct: 24 VKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNM 80
Query: 53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
FFA Q+I N+CAT A+LS+LLNC +D+GP LS++K+FTK F PE KG AI N+ + A
Sbjct: 81 FFAHQLIPNSCATHALLSVLLNCSSVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKA 140
Query: 113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
HNS ARPEP +PE+Q +A + + +HF+SY+P+ G L+ELDGLK PI GP G+
Sbjct: 141 HNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPW--GE 198
Query: 170 GDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQ 225
D +W + VI ERI + E IRFNLMAV+ +R+ Y A L + R+ +L+
Sbjct: 199 -DEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLE 257
Query: 226 QLASL 230
L L
Sbjct: 258 ALQQL 262
Score = 38.9 bits (89), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 260 EKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
E L EE EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 647 EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQ 694
>sp|Q99PU7|BAP1_MOUSE Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Mus musculus GN=Bap1
PE=1 SV=1
Length = 728
Score = 194 bits (494), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 115/245 (46%), Positives = 150/245 (61%), Gaps = 23/245 (9%)
Query: 3 VKGVQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK-----DDRVVIKDP-NPNL 52
VKGVQVEE+Y L PVYG IFLFKW R K DD VI D N+
Sbjct: 24 VKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNM 80
Query: 53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
FFA Q+I N+CAT A+LS+LLNC ++D+GP LS++K+FTK F PE KG AI N+ + A
Sbjct: 81 FFAHQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKA 140
Query: 113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
HNS ARPEP +PE+Q +A + + +HF+SY+P+ G L+ELDGLK PI GP G+
Sbjct: 141 HNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPW--GE 198
Query: 170 GDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQ 225
D +W + VI ERI + E IRFNLMAV+ +R+ Y L + R+ +L+
Sbjct: 199 -DEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIKYETRLHVLKVNRQTVLE 257
Query: 226 QLASL 230
L L
Sbjct: 258 ALQQL 262
Score = 38.9 bits (89), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 260 EKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
E L EE EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 646 EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQ 693
>sp|Q66JB6|BAP1_XENTR Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Xenopus tropicalis
GN=bap1 PE=2 SV=1
Length = 685
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/245 (46%), Positives = 149/245 (60%), Gaps = 23/245 (9%)
Query: 3 VKGVQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK-----DDRVVIKDPN-PNL 52
VKGVQVEE+Y L PVYG IFLFKW R K DD V++D N+
Sbjct: 24 VKGVQVEEIYDLQSKCPG---PVYGFIFLFKWIEERRSRRKVSTLLDDTSVMEDEVVNNM 80
Query: 53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
FFA Q+I N+CAT A+LS+LLNC + +GP LS++KEFTK F PE KG AI N+ + A
Sbjct: 81 FFAHQLIPNSCATHALLSVLLNCSGVHLGPTLSRIKEFTKGFSPESKGYAIGNAPELAKA 140
Query: 113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
HNS ARPEP +PE+Q +A + + +HF+SY+P+ G L+ELDGLK PI GP
Sbjct: 141 HNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKGRLFELDGLKVYPIDHGPWA--- 197
Query: 170 GDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQ 225
D +W + VI ERI + E IRFNLMAV+ +R+ Y ++L + R+ +L+
Sbjct: 198 EDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRLKYESKLHILKMNRQTVLE 257
Query: 226 QLASL 230
L L
Sbjct: 258 ALQQL 262
Score = 38.9 bits (89), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 258 ATEKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
++E L EE EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 601 SSEACLREELEKRKKFKIDDQRRTHNYDEFICAFISMLAQEGMLASLVEQ 650
>sp|Q5F3N6|BAP1_CHICK Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Gallus gallus GN=BAP1
PE=2 SV=1
Length = 700
Score = 192 bits (487), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/245 (44%), Positives = 147/245 (60%), Gaps = 23/245 (9%)
Query: 3 VKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDR----------VVIKDPNPNL 52
VKGVQVEE+Y L PVYG IFLFKW + R V+ D N+
Sbjct: 24 VKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEESRSRRKVSTLVDETSVIDDDIVNNM 80
Query: 53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
FFA Q+I N+CAT A+LS+LLNC ++D+GP LS++K+FTK F PE KG AI N+ + A
Sbjct: 81 FFAHQLIPNSCATHALLSVLLNCNNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKA 140
Query: 113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
NS ARPEP +PE+Q +A + + +HF+SY+P+ G L+ELDGLK PI GP
Sbjct: 141 RNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKGRLFELDGLKVYPIDHGPWA--- 197
Query: 170 GDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQ 225
D +W + VI ERI + E IRFNLMAV+ +R+ Y ++L + R+ +L+
Sbjct: 198 DDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRMKYESKLHILKMNRQTVLE 257
Query: 226 QLASL 230
L L
Sbjct: 258 ALQQL 262
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 260 EKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
E L EE EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 618 EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLASLVEQ 665
>sp|Q52L14|BAP1_XENLA Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Xenopus laevis
GN=bap1 PE=2 SV=1
Length = 618
Score = 192 bits (487), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/267 (44%), Positives = 156/267 (58%), Gaps = 34/267 (12%)
Query: 3 VKGVQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK-----DDRVVIKDP--NPN 51
VKGVQVEE+Y L PVYG IFLFKW R K DD V++D N N
Sbjct: 24 VKGVQVEEIYDLQSKCPG---PVYGFIFLFKWIEERRSRRKVSTLLDDTSVMEDEVVN-N 79
Query: 52 LFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRA 111
+FFA Q+I N+CAT A+LS+LLNC + +GP LS++KEFTK F PE KG AI N+ +
Sbjct: 80 MFFAHQLIPNSCATHALLSVLLNCGGVHLGPTLSRIKEFTKGFSPESKGYAIGNAPELAK 139
Query: 112 AHNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGG 168
AHNS ARPEP +PE+Q +A + + +HF+SY+P+ G L+ELDGLK PI GP
Sbjct: 140 AHNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKGRLFELDGLKVYPIDHGPWA-- 197
Query: 169 QGDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERIL 224
D +W + VI ERI + E IRFNLMAV+ +R+ Y +L + R+ +L
Sbjct: 198 -EDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRLKYEGKLNILKMNRQTVL 256
Query: 225 QQLASL---------QSERMVDKTSFE 242
+ L L Q+++ D S E
Sbjct: 257 EALQQLIRVTQPELIQAQKSTDGQSTE 283
>sp|A1L2G3|BAP1_DANRE Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Danio rerio GN=bap1
PE=2 SV=2
Length = 755
Score = 188 bits (478), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 114/258 (44%), Positives = 158/258 (61%), Gaps = 23/258 (8%)
Query: 3 VKGVQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK-----DDRVVIKDPNPN-L 52
VKGVQVEE+Y L + PVYG IFLFKW R K D+ VI D N +
Sbjct: 24 VKGVQVEEIYDLQSKCQS---PVYGFIFLFKWIEERRSRRKVSTLVDETSVIDDDIVNDM 80
Query: 53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
FFA Q+I N+CAT A+LS+LLNC +++G LS++K FTK F PE KG AI N+ + A
Sbjct: 81 FFAHQLIPNSCATHALLSVLLNCSGVELGMTLSRMKAFTKGFNPESKGYAIGNAPELAKA 140
Query: 113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
HNS ARPEP +PE+Q +A + + +HF+SY+P+ L+ELDGLK PI GP G+
Sbjct: 141 HNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKDRLFELDGLKAYPIDHGPW--GE 198
Query: 170 GDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQ 225
D +W + VI ERI + E IRFNLMAV+ +R+ Y ++L +R R+ IL+
Sbjct: 199 -DEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIKYESKLDILKRNRQIILE 257
Query: 226 QLASLQSERMVDKTSFEA 243
L ++ ++++ T E+
Sbjct: 258 GLQQIREKKVIRMTQQES 275
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 265 EEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
E EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 679 EVEKRKKYKIDDQRRTHNYDEFICTFISMLAQEGMLASLVEQ 720
>sp|C4A0D9|BAP1_BRAFL Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Branchiostoma
floridae GN=BAP1 PE=3 SV=1
Length = 694
Score = 181 bits (460), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/242 (44%), Positives = 146/242 (60%), Gaps = 23/242 (9%)
Query: 3 VKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWR----------PGEKDDRVVIKDPNPNL 52
VKGVQVEE+Y L S PVYG IFLFKW P ++ VV +D ++
Sbjct: 24 VKGVQVEEIYDL---SKPIEGPVYGFIFLFKWSEERRSRRKVGPSMEESFVVDEDIVNDM 80
Query: 53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
FFA Q+I N+CAT A+LS+LLNCP I +G L++LK FT+ PE KG AI N I A
Sbjct: 81 FFAQQLIPNSCATHALLSVLLNCPQISLGSTLTRLKYFTRGMGPESKGWAIGNVPEIARA 140
Query: 113 HNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
HNS ARPEP +PE+Q ++ + + +HF+SY+ + L+ELDGLK PI GP G+
Sbjct: 141 HNSHARPEPRHLPEKQTGISSVRTAEAFHFVSYVTTNDRLFELDGLKPYPIDHGPW--GE 198
Query: 170 GDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQ 225
+ DW + + VI ERI + E IRFNLMAV+ +R++ Y +L + R+ +L+
Sbjct: 199 KE-DWTEKFRRVISERIGNATGGENGHDIRFNLMAVVADRRQQYETKLNTLKTNRQIVLE 257
Query: 226 QL 227
L
Sbjct: 258 AL 259
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 248 LSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
L V I+ + + E EK KK++ ++ RR HNY F+ FL++LAE+ QL L+++
Sbjct: 597 LKNVETEIQICEQHLKDEIEKRKKYKVDDCRRTHNYDDFIRTFLRMLAEQGQLSKLVDQ 655
>sp|A2VDM8|BAP1_BOVIN Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Bos taurus GN=BAP1
PE=2 SV=1
Length = 711
Score = 174 bits (442), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/248 (44%), Positives = 150/248 (60%), Gaps = 26/248 (10%)
Query: 3 VKGVQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK-----DDRVVIKDP--NPN 51
VKGVQVEE+Y L PVYG IFLFKW R K DD VI D N N
Sbjct: 24 VKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVN-N 79
Query: 52 LFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRA 111
+FFA Q+I N+CAT A+LS+LLNC ++D+GP LS++K+FTK F PE KG AI N+ +
Sbjct: 80 MFFAHQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAK 139
Query: 112 AHNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGG 168
AHNS ARPEP +PE+Q +A + + +HF+SY+P+ G L+ELDGLK PI GP G
Sbjct: 140 AHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPW--G 197
Query: 169 QGDMDWLQMVQPVIQERIERYS---KSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQ 225
+ D +W + VI ERI + K E R +++ V NR+ + A + + + ++Q
Sbjct: 198 E-DEEWTDKARRVIMERIGLATAGIKYEARLHVLKV--NRQTVLEALQQLIRVTQPELIQ 254
Query: 226 QLASLQSE 233
S +S+
Sbjct: 255 THKSQESQ 262
Score = 38.5 bits (88), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 260 EKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
E L EE EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 629 EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQ 676
>sp|Q17N72|CALYP_AEDAE Ubiquitin carboxyl-terminal hydrolase calypso OS=Aedes aegypti
GN=calypso PE=3 SV=1
Length = 478
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 145/258 (56%), Gaps = 20/258 (7%)
Query: 3 VKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDR-------VVIKDPNP--NLF 53
VKGVQVEE+Y L N PVYG IFLF+W + R + +KD N+F
Sbjct: 31 VKGVQVEEIYDL---QKNIEGPVYGFIFLFRWIEERRARRKIVETTEIYVKDEEAVNNIF 87
Query: 54 FASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAH 113
FA QV+ N+CAT A+LS+LLNC DID+G LS+LK TK PE KG AI N+ + AH
Sbjct: 88 FAQQVVPNSCATHALLSVLLNCSDIDLGNTLSRLKVHTKGMCPENKGWAIGNTPELACAH 147
Query: 114 NSFARPEPFVPEEQKAA---GK-DDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQ 169
NS A P+ ++ + G+ + +HF+S++P++G L+ELDGLK P+ GP +
Sbjct: 148 NSHAMPQARRRMDRNSGVSTGRFTGEAFHFVSFVPINGHLFELDGLKPFPMDHGPWGEKE 207
Query: 170 GDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLA 228
W + V+ +R+ + +IRFNLMAV+ +R+ T +LK + + + L
Sbjct: 208 A---WTDKFRRVMSDRLGISTGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQTIVSAALE 264
Query: 229 SLQSERMVDKTSFEALNK 246
L + + S E ++K
Sbjct: 265 KLLKSKRTESRSLETVDK 282
>sp|B3MIV9|CALYP_DROAN Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
ananassae GN=calypso PE=3 SV=1
Length = 470
Score = 164 bits (416), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 179/342 (52%), Gaps = 51/342 (14%)
Query: 6 VQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 52
VQVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 66 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 118
Query: 53 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 110
FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK TK PE KGLAI N+ +
Sbjct: 119 FFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKAHTKGMSPENKGLAIGNTPELA 178
Query: 111 AAHNSFARPEPFVPEEQKAAGKDD-----DVYHFISYIPVDGVLYELDGLKEGPISLGPC 165
AHNS A P+ E+ AG + +HF+S++P++G L+ELDGLK P++ G
Sbjct: 179 CAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-- 236
Query: 166 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 223
G + DW + V+ ER+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 237 -GWEDHEDWTDKFRRVMTERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 295
Query: 224 --LQQL--ASLQSE-------------RMVDKTSFEA--LNKSLSEVNAGIEGATEKILM 264
LQ+L A Q E +++ ++F A L L ++ I + +
Sbjct: 296 GTLQKLLKADEQGEGGNGDPQRPDTPSTLLEPSAFTARDLQSLLKNLDTEIAINEQHLAD 355
Query: 265 EEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
E ++ K++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 356 ENDRRHKFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQ 397
>sp|B4HST0|CALYP_DROSE Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
sechellia GN=calypso PE=3 SV=1
Length = 471
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 178/342 (52%), Gaps = 51/342 (14%)
Query: 6 VQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 52
VQVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 68 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 120
Query: 53 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 110
FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK TK PE KGLAI N+ +
Sbjct: 121 FFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKTHTKGMSPENKGLAIGNTPELA 180
Query: 111 AAHNSFARPEPFVPEEQKAAGKDD-----DVYHFISYIPVDGVLYELDGLKEGPISLGPC 165
AHNS A P+ E+ AG + +HF+S++P++G L+ELDGLK P++ G
Sbjct: 181 CAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-- 238
Query: 166 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 223
G + DW + V+ ER+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 239 -GWEDSEDWTDKFRRVMAERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 297
Query: 224 --LQQL--ASLQSER-------------MVDKTSFEA--LNKSLSEVNAGIEGATEKILM 264
LQ+L A Q E +++ ++F A L L ++ I + +
Sbjct: 298 GTLQKLLKADEQGESGNGDSQRPDTPTTLLEPSAFTARDLQSLLKNLDTEIAINEQHLTD 357
Query: 265 EEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
E ++ ++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 358 ENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQ 399
>sp|B4QHH0|CALYP_DROSI Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
simulans GN=calypso PE=3 SV=1
Length = 471
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 178/342 (52%), Gaps = 51/342 (14%)
Query: 6 VQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 52
VQVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 68 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 120
Query: 53 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 110
FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK TK PE KGLAI N+ +
Sbjct: 121 FFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKTHTKGMSPENKGLAIGNTPELA 180
Query: 111 AAHNSFARPEPFVPEEQKAAGKDD-----DVYHFISYIPVDGVLYELDGLKEGPISLGPC 165
AHNS A P+ E+ AG + +HF+S++P++G L+ELDGLK P++ G
Sbjct: 181 CAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-- 238
Query: 166 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 223
G + DW + V+ ER+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 239 -GWEDSEDWTDKFRRVMAERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 297
Query: 224 --LQQL--ASLQSER-------------MVDKTSFEA--LNKSLSEVNAGIEGATEKILM 264
LQ+L A Q E +++ ++F A L L ++ I + +
Sbjct: 298 GTLQKLLKADEQGESGNGDSQRPDTPTTLLEPSAFTARDLQSLLKNLDTEIAINEQHLAD 357
Query: 265 EEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
E ++ ++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 358 ENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQ 399
>sp|Q7K5N4|CALYP_DROME Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
melanogaster GN=calypso PE=1 SV=1
Length = 471
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 178/342 (52%), Gaps = 51/342 (14%)
Query: 6 VQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 52
VQVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 68 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 120
Query: 53 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 110
FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK TK PE KGLAI N+ +
Sbjct: 121 FFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKTHTKGMSPENKGLAIGNTPELA 180
Query: 111 AAHNSFARPEPFVPEEQKAAGKDD-----DVYHFISYIPVDGVLYELDGLKEGPISLGPC 165
AHNS A P+ E+ AG + +HF+S++P++G L+ELDGLK P++ G
Sbjct: 181 CAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-- 238
Query: 166 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 223
G + DW + V+ ER+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 239 -GWEDSEDWTDKFRRVMAERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 297
Query: 224 --LQQL--ASLQSER-------------MVDKTSFEA--LNKSLSEVNAGIEGATEKILM 264
LQ+L A Q E +++ ++F A L L ++ I + +
Sbjct: 298 GTLQKLLKADEQGESGNGDSQRPDTPTTLLEPSAFTARDLQSLLKNLDTEIAINEQHLAD 357
Query: 265 EEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
E ++ ++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 358 ENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQ 399
>sp|B4P6P6|CALYP_DROYA Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila yakuba
GN=calypso PE=3 SV=1
Length = 471
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 178/342 (52%), Gaps = 51/342 (14%)
Query: 6 VQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 52
VQVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 68 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 120
Query: 53 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 110
FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK TK PE KGLAI N+ +
Sbjct: 121 FFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKAHTKGMSPENKGLAIGNTPELA 180
Query: 111 AAHNSFARPEPFVPEEQKAAGKDD-----DVYHFISYIPVDGVLYELDGLKEGPISLGPC 165
AHNS A P+ E+ AG + +HF+S++P++G L+ELDGLK P++ G
Sbjct: 181 CAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-- 238
Query: 166 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 223
G + DW + V+ ER+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 239 -GWEDSEDWTDKFRRVMAERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 297
Query: 224 --LQQL--ASLQSER-------------MVDKTSFEA--LNKSLSEVNAGIEGATEKILM 264
LQ+L A Q E +++ ++F A L L ++ I + +
Sbjct: 298 GTLQKLLKADEQGESGNGDSQRPDTPTTLLEPSAFTARDLQSLLKNLDTEIAINEQHLAD 357
Query: 265 EEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
E ++ ++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 358 ENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQ 399
>sp|B3NPV7|CALYP_DROER Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila erecta
GN=calypso PE=3 SV=1
Length = 471
Score = 163 bits (412), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 178/342 (52%), Gaps = 51/342 (14%)
Query: 6 VQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 52
VQVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 68 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 120
Query: 53 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 110
FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK TK PE KGLAI N+ +
Sbjct: 121 FFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKVHTKGMSPENKGLAIGNTPELA 180
Query: 111 AAHNSFARPEPFVPEEQKAAGKDD-----DVYHFISYIPVDGVLYELDGLKEGPISLGPC 165
AHNS A P+ E+ AG + +HF+S++P++G L+ELDGLK P++ G
Sbjct: 181 CAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-- 238
Query: 166 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 223
G + DW + V+ ER+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 239 -GWEDSEDWTDKFRRVMAERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 297
Query: 224 --LQQL--ASLQSER-------------MVDKTSFEA--LNKSLSEVNAGIEGATEKILM 264
LQ+L A Q E +++ ++F A L L ++ I + +
Sbjct: 298 GTLQKLLKADEQGESGNGDSQRPDTPTTLLEPSAFTARDLQSLLKNLDTEIAINEQHLAD 357
Query: 265 EEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
E ++ ++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 358 ENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQ 399
>sp|B4LQ24|CALYP_DROVI Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila virilis
GN=calypso PE=3 SV=1
Length = 462
Score = 162 bits (410), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 180/340 (52%), Gaps = 49/340 (14%)
Query: 6 VQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 52
VQVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 52 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 104
Query: 53 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 110
FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK TK PE KGLAI N+ +
Sbjct: 105 FFAQQVVPNSCATHALLSVLLNCNENNLQLGETLSRLKAHTKGMSPENKGLAIGNTPELA 164
Query: 111 AAHNSFARPEPFVPEEQKAAGK-----DDDVYHFISYIPVDGVLYELDGLKEGPISLGPC 165
AHNS A P+ E+ AG + +HF+S++P++G L+ELDGLK P++ G C
Sbjct: 165 CAHNSHAMPQARRRLERTGAGVASCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-C 223
Query: 166 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 223
+ DW + V+ ER+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 224 W--EEHEDWTDKFRRVMAERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 281
Query: 224 --LQQL--ASLQSER-----------MVDKTSFEA--LNKSLSEVNAGIEGATEKILMEE 266
LQ+L A Q ER +++ ++F A L L ++ I + + E
Sbjct: 282 GTLQKLLKADEQGERDEQQRPDTPNTLLEPSAFTARDLQSLLKNLDTEIAINEQHLADEN 341
Query: 267 EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
++ + ++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 342 DRRQMFKVDASRRTHNYDKFICTFLTMLAHQGVLGELVSQ 381
>sp|B4JW98|CALYP_DROGR Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
grimshawi GN=calypso PE=3 SV=1
Length = 462
Score = 161 bits (408), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/340 (33%), Positives = 179/340 (52%), Gaps = 49/340 (14%)
Query: 6 VQVEELYSLDLDSLNNLRPV---YGLIFLFKWRPGEKDDR--------VVIKDPNP--NL 52
VQVEE+Y L +P+ YG IFLF+W + R + +KD ++
Sbjct: 52 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 104
Query: 53 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 110
FFA QV+ N+CAT A+LS+LLNC ++ +G L +LK TK PE KGLAI N+ +
Sbjct: 105 FFAQQVVPNSCATHALLSVLLNCNENNLQLGETLGRLKAHTKGMSPENKGLAIGNTPELA 164
Query: 111 AAHNSFARPEPFVPEEQKAAGK-----DDDVYHFISYIPVDGVLYELDGLKEGPISLGPC 165
AHNS A P+ E+ AG + +HF+S++P++G L+ELDGLK P++ G C
Sbjct: 165 CAHNSHAMPQARRRLERTGAGVASCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-C 223
Query: 166 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 223
+ DW + V+ ER+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 224 W--EEHEDWTDKFRRVMAERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 281
Query: 224 --LQQL--ASLQSER-----------MVDKTSFEA--LNKSLSEVNAGIEGATEKILMEE 266
LQ+L A Q ER +++ ++F A L L ++ I + + E
Sbjct: 282 GTLQKLLKADEQGERDEQQRPDTPTTLLEPSAFTARDLQSLLKNLDTEIAINEQHLADEN 341
Query: 267 EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
++ + ++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 342 DRRQMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQ 381
>sp|Q291J4|CALYP_DROPS Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
pseudoobscura pseudoobscura GN=calypso PE=3 SV=1
Length = 475
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 177/342 (51%), Gaps = 51/342 (14%)
Query: 6 VQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 52
VQVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 67 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 119
Query: 53 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 110
FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK TK PE KGLAI N+ +
Sbjct: 120 FFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKVHTKGMSPENKGLAIGNTPELA 179
Query: 111 AAHNSFARPEPFVPEEQKAAGK-----DDDVYHFISYIPVDGVLYELDGLKEGPISLGPC 165
AHNS A P+ E+ AG + +HF+S++P+ G L+ELDGLK P++ G
Sbjct: 180 CAHNSHAIPQARRRLERTGAGVASCRFTGEAFHFVSFVPISGQLFELDGLKPYPMNHG-- 237
Query: 166 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 223
G + DW + V+ ER+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 238 -GWEDHEDWTDKFRRVMAERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 296
Query: 224 --LQQL--ASLQSER-------------MVDKTSFEA--LNKSLSEVNAGIEGATEKILM 264
LQ+L A Q E +++ ++F A L L ++ I + +
Sbjct: 297 GTLQKLLKADEQGESGNGDQQRPDTPTTLLEPSAFTAKDLQLLLKNLDTEIAINEQNLAD 356
Query: 265 EEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
E ++ ++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 357 ENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQ 398
>sp|B4GAM2|CALYP_DROPE Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
persimilis GN=calypso PE=3 SV=1
Length = 475
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 177/342 (51%), Gaps = 51/342 (14%)
Query: 6 VQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 52
VQVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 67 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 119
Query: 53 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 110
FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK TK PE KGLAI N+ +
Sbjct: 120 FFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKVHTKGMSPENKGLAIGNTPELA 179
Query: 111 AAHNSFARPEPFVPEEQKAAGK-----DDDVYHFISYIPVDGVLYELDGLKEGPISLGPC 165
AHNS A P+ E+ AG + +HF+S++P+ G L+ELDGLK P++ G
Sbjct: 180 CAHNSHAIPQARRRLERTGAGVASCRFTGEAFHFVSFVPISGQLFELDGLKPYPMNHG-- 237
Query: 166 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 223
G + DW + V+ ER+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 238 -GWEDHEDWTDKFRRVMAERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 296
Query: 224 --LQQL--ASLQSER-------------MVDKTSFEA--LNKSLSEVNAGIEGATEKILM 264
LQ+L A Q E +++ ++F A L L ++ I + +
Sbjct: 297 GTLQKLLKADEQGESGNGDQQRPDTPTTLLEPSAFTAKDLQLLLKNLDTEIAINEQNLAD 356
Query: 265 EEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
E ++ ++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 357 ENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQ 398
>sp|B4KT51|CALYP_DROMO Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
mojavensis GN=calypso PE=3 SV=1
Length = 461
Score = 158 bits (400), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 177/338 (52%), Gaps = 47/338 (13%)
Query: 6 VQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 52
VQVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 52 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 104
Query: 53 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 110
FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK TK PE KGLAI N+ +
Sbjct: 105 FFAQQVVPNSCATHALLSVLLNCNENNLQLGETLSRLKAHTKGMSPENKGLAIGNTPELA 164
Query: 111 AAHNSFARPEPFVPEEQKAAGK-----DDDVYHFISYIPVDGVLYELDGLKEGPISLGPC 165
AHNS A P+ E+ AG + +HF+S++P++G L+ELDGLK P++ G C
Sbjct: 165 CAHNSHAMPQARRRLERTGAGVASCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-C 223
Query: 166 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 223
+ DW + V+ +R+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 224 W--EEHEDWTDKFRRVMADRLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 281
Query: 224 --LQQLASLQSE-----------RMVDKTSFEA--LNKSLSEVNAGIEGATEKILMEEEK 268
LQ+L + +++ ++F A L L ++ I + + E ++
Sbjct: 282 GTLQKLLKADEQGDDQQRPDTPNTLLEPSAFTARDLQSLLKNLDTEIAINEQHLADENDR 341
Query: 269 FKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 306
+ ++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 342 RQMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQ 379
>sp|B0W2R4|CALYP_CULQU Ubiquitin carboxyl-terminal hydrolase calypso OS=Culex
quinquefasciatus GN=calypso PE=3 SV=1
Length = 470
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 178/390 (45%), Gaps = 94/390 (24%)
Query: 3 VKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPNP----------NL 52
VKGVQVEE+Y L ++ PV+G IFLF+W + R +++ ++
Sbjct: 31 VKGVQVEEIYDLQ-KTIEG--PVFGFIFLFRWIEERRARRKIVETTTEMYVKDEEAVNSI 87
Query: 53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
FFA QV+ N+CAT A+LS+LLNC DID+G LS+LK TK P+ KG AI N+ + A
Sbjct: 88 FFAHQVVPNSCATHALLSVLLNCSDIDLGTTLSRLKVHTKGMCPDNKGWAIGNTPELACA 147
Query: 113 HNSFARPEPFVPEEQKAA---GK-DDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGG 168
HNS A P+ ++ + G+ + +HF+S+ P++G L+ELDGLK P+ GP G
Sbjct: 148 HNSHAMPQARRRMDRNSGVSTGRFTGEAFHFVSFCPINGHLFELDGLKPFPMDHGPW--G 205
Query: 169 QGDMDWLQMVQPVIQER-------------------------------------IERYSK 191
+ + DW + V+ +R +E S+
Sbjct: 206 EKE-DWTDKFRRVMSDRLGISTDRRIAITHKLKMLRTNQTIVSAALEKLLKSKQLESRSQ 264
Query: 192 SEIRFNLMAVIKNRKELYT------AELKEFQRKRE------RILQQLASLQSE----RM 235
+EIR + + K +E ++L E K E + L+ L SL S +
Sbjct: 265 AEIRETVDKIKKEEQESTVKLSSEYSQLLEMHEKDEPAVAMSKELESLVSLNSSSDSVEI 324
Query: 236 VDKTSFEALNKSLSEVNAGIEGAT---------------------EKILMEEEKFKKWRT 274
+ +T + N S A I T + + E EK ++
Sbjct: 325 IGETEIKKENPPPSPPPAFIGAGTFSPKDLLSLLKNLESEINITEQHLCDENEKRAMFKV 384
Query: 275 ENIRRKHNYIPFLFNFLKILAEKKQLKPLI 304
++ RR HNY F+ FL +LA + +L L+
Sbjct: 385 DDCRRTHNYDEFICTFLSMLAYQGELGDLV 414
>sp|P35122|UCHL_DROME Ubiquitin carboxyl-terminal hydrolase OS=Drosophila melanogaster
GN=Uch PE=2 SV=2
Length = 227
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 8 VEELYSLDLDSLNNL-RPVYGLIFLF-------KWRPGEKDDRVVIKDPNP-NLFFASQV 58
V ++ L+ D+L + RPV I LF K R E D +++ +P +LF+ Q
Sbjct: 29 VTDVIGLEDDTLEWIPRPVKAFILLFPCSETYEKHRAEEHDRIKEVEEQHPEDLFYMRQF 88
Query: 59 INNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLAINNSDAIRAAHNS 115
+NAC T A++ + N ++DI + LK+F T + PE +G A+ + A H +
Sbjct: 89 THNACGTVALIHSVANNKEVDI--DRGVLKDFLEKTASLSPEERGRALEKDEKFTADHEA 146
Query: 116 FARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWL 175
A+ + AA + ++HFI+ + +G LYELDG K PI GP + + ++
Sbjct: 147 LAQEG-----QTNAANHEKVIHHFIALVNKEGTLYELDGRKSFPIKHGPTS----EETFV 197
Query: 176 QMVQPVIQERIERYSKSEIRFNLMAV 201
+ V +E + R +E+RF ++A+
Sbjct: 198 KDAAKVCKEFMAR-DPNEVRFTVLAL 222
>sp|Q2TBG8|UCHL3_BOVIN Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Bos taurus
GN=UCHL3 PE=2 SV=1
Length = 230
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 23/208 (11%)
Query: 7 QVEELYSLDLDSLNNL-RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQ 57
Q ++Y +D + L+ + RPV ++ LF K+ ++ IK D +++F Q
Sbjct: 30 QFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQ 89
Query: 58 VINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHN 114
I+NAC T ++ + N D + G L K E + + PE + + N DAIR H
Sbjct: 90 TISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESASMSPEERARYLENYDAIRVTHE 149
Query: 115 SFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMD 173
+ A + +A D+ V HFI+ + VDG LYELDG K PI+ G + D
Sbjct: 150 TSAHEG-----QTEAPNIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETS----DET 200
Query: 174 WLQMVQPVIQERIERYSKSEIRFNLMAV 201
L+ V ++ +ER E+RFN +A+
Sbjct: 201 LLEDAIEVCKKFMER-DPDELRFNAIAL 227
>sp|P15374|UCHL3_HUMAN Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Homo sapiens
GN=UCHL3 PE=1 SV=1
Length = 230
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 23/208 (11%)
Query: 7 QVEELYSLDLDSLNNL-RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQ 57
Q ++Y +D + L+ + RPV ++ LF K+ ++ IK D +++F Q
Sbjct: 30 QFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQ 89
Query: 58 VINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHN 114
I+NAC T ++ + N D + G L K E + + PE + + N DAIR H
Sbjct: 90 TISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESVSMSPEERARYLENYDAIRVTHE 149
Query: 115 SFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMD 173
+ A + +A D+ V HFI+ + VDG LYELDG K PI+ G + D
Sbjct: 150 TSAHEG-----QTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETS----DET 200
Query: 174 WLQMVQPVIQERIERYSKSEIRFNLMAV 201
L+ V ++ +ER E+RFN +A+
Sbjct: 201 LLEDAIEVCKKFMER-DPDELRFNAIAL 227
>sp|Q9JKB1|UCHL3_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Mus musculus
GN=Uchl3 PE=1 SV=2
Length = 230
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 23/208 (11%)
Query: 7 QVEELYSLDLDSLNNL-RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQ 57
Q ++Y ++ + L+ + RPV ++ LF K+ ++ IK D +++F Q
Sbjct: 30 QFVDVYGMEPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQ 89
Query: 58 VINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHN 114
I+NAC T ++ + N D + G L K E + + PE + + N DAIR H
Sbjct: 90 TISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESVSMSPEERAKFLENYDAIRVTHE 149
Query: 115 SFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMD 173
+ A + +A D+ V HFI+ + VDG LYELDG K PI+ G + D
Sbjct: 150 TSAHEG-----QTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGKTS----DET 200
Query: 174 WLQMVQPVIQERIERYSKSEIRFNLMAV 201
L+ V ++ +ER E+RFN +A+
Sbjct: 201 LLEDAIEVCKKFMER-DPDELRFNAIAL 227
>sp|Q91Y78|UCHL3_RAT Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Rattus
norvegicus GN=Uchl3 PE=1 SV=1
Length = 230
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 23/208 (11%)
Query: 7 QVEELYSLDLDSLNNL-RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQ 57
Q ++Y ++ + L+ + RPV ++ LF K+ ++ IK D +++F Q
Sbjct: 30 QFVDVYGMEPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQ 89
Query: 58 VINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHN 114
I+NAC T ++ + N D + G L K E + PE + + N DAIR H
Sbjct: 90 TISNACGTIGLIHAIANNKDKMHFESGSALKKFLEESVAMSPEERARHLENYDAIRVTHE 149
Query: 115 SFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMD 173
+ A + +A D+ V HFI+ + VDG LYELDG K PI+ G + D
Sbjct: 150 TSAHEG-----QTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGKTS----DET 200
Query: 174 WLQMVQPVIQERIERYSKSEIRFNLMAV 201
L+ V ++ +ER E+RFN +A+
Sbjct: 201 LLEDAIEVCKKFMER-DPDELRFNAIAL 227
>sp|Q60HC8|UCHL1_MACFA Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Macaca
fascicularis GN=UCHL1 PE=2 SV=1
Length = 223
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 22/204 (10%)
Query: 10 ELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDR------VVIKDPNPNLFFASQVINNA 62
++ L+ DSL ++ P L+ LF ++ R + ++ +P ++F Q I N+
Sbjct: 30 DVLGLEEDSLGSVPAPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTIGNS 89
Query: 63 CATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLAINNSDAIRAAHNSFARP 119
C T ++ + N D + S LK+F T+ PE + ++AI+AAH++
Sbjct: 90 CGTIGLIHAVANNQDKLGFEDGSVLKQFLSETEKMSPEDRAKCFEKNEAIQAAHDA---- 145
Query: 120 EPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQ 179
V +E + D +HFI + VDG LYELDG P++ G + G LQ
Sbjct: 146 ---VAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGASSEGT----LLQDAA 198
Query: 180 PVIQERIERYSKSEIRFNLMAVIK 203
V +E ER + E+RF+ +A+ K
Sbjct: 199 KVCREFTER-EQGEVRFSAVALCK 221
>sp|P58321|UCHL4_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L4 OS=Mus musculus
GN=Uchl4 PE=1 SV=1
Length = 233
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 7 QVEELYSLDLDSLNNL-RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQ 57
Q ++Y ++ + L+ + RPV ++ LF K+ ++ IK D +++F Q
Sbjct: 30 QFVDVYGMESELLSIIPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQ 89
Query: 58 VINNACATQAILSILLNCPD------IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRA 111
I+NAC T + ++ + + G L K E + + PE + + N DAIR
Sbjct: 90 TISNACGTIGTIGLIHAIANNKDKVHFESGSTLKKFLEESVSMSPEERAKYLENYDAIRV 149
Query: 112 AHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQG 170
H + A + +A D+ V HFI+ + VDG LYELDG K PI+ G +
Sbjct: 150 THETSAHEG-----QTEAPSIDEKVDLHFIALVHVDGHLYELDGWKPFPINHGKTS---- 200
Query: 171 DMDWLQMVQPVIQERIERYSKSEIRFNLMAV 201
D L+ V V ++ +ER E+RFN +A+
Sbjct: 201 DETLLEDVIKVCKKFMER-DPDELRFNAIAL 230
>sp|Q06AB3|UCHL3_PIG Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Sus scrofa
GN=UCHL3 PE=2 SV=1
Length = 230
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 23/208 (11%)
Query: 7 QVEELYSLDLDSLNNL-RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQ 57
Q ++Y +D + L+ + RPV ++ LF K+ ++ IK D P+++F Q
Sbjct: 30 QFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTPSVYFMKQ 89
Query: 58 VINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHN 114
I+NAC T ++ + N + + G L K E + + P+ + + + DAI H
Sbjct: 90 TISNACGTIGLIHAIANNKNKMHFESGSTLKKFLEESASMSPDERARYLESYDAIPVTHE 149
Query: 115 SFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMD 173
+ A + +A D+ V HFI+ + VDG LYELDG K PI+ G + D
Sbjct: 150 TSAHEG-----QTEAPNIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETS----DET 200
Query: 174 WLQMVQPVIQERIERYSKSEIRFNLMAV 201
L+ V ++ +ER E+RFN +A+
Sbjct: 201 LLEDAIEVCKKFMER-DPDELRFNAIAL 227
>sp|Q00981|UCHL1_RAT Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Rattus
norvegicus GN=Uchl1 PE=1 SV=2
Length = 223
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 10 ELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDR------VVIKDPNPNLFFASQVINNA 62
++ L+ ++L ++ P L+ LF ++ R + ++ +P ++F Q I N+
Sbjct: 30 DVLGLEEETLGSVPSPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTIGNS 89
Query: 63 CATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLAINNSDAIRAAHNSFARP 119
C T ++ + N D + S LK+F T+ PE + ++AI+AAH+S
Sbjct: 90 CGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKCFEKNEAIQAAHDS---- 145
Query: 120 EPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQ 179
V +E + D +HFI + VDG LYELDG P++ G + LQ
Sbjct: 146 ---VAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVN----HGASSEDSLLQDAA 198
Query: 180 PVIQERIERYSKSEIRFNLMAVIK 203
V +E ER + E+RF+ +A+ K
Sbjct: 199 KVCREFTER-EQGEVRFSAVALCK 221
>sp|Q9R0P9|UCHL1_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Mus musculus
GN=Uchl1 PE=1 SV=1
Length = 223
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 10 ELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDR------VVIKDPNPNLFFASQVINNA 62
++ L+ ++L ++ P L+ LF ++ R + ++ +P ++F Q I N+
Sbjct: 30 DVLGLEEETLGSVPSPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTIGNS 89
Query: 63 CATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLAINNSDAIRAAHNSFARP 119
C T ++ + N D + S LK+F T+ PE + ++AI+AAH+S
Sbjct: 90 CGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKCFEKNEAIQAAHDS---- 145
Query: 120 EPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQ 179
V +E + D +HFI + VDG LYELDG P++ G + LQ
Sbjct: 146 ---VAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVN----HGASSEDSLLQDAA 198
Query: 180 PVIQERIERYSKSEIRFNLMAVIK 203
V +E ER + E+RF+ +A+ K
Sbjct: 199 KVCREFTER-EQGEVRFSAVALCK 221
>sp|Q6SEG5|UCHL1_PIG Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Sus scrofa
GN=UCHL1 PE=2 SV=1
Length = 223
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 10 ELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDR------VVIKDPNPNLFFASQVINNA 62
++ L+ +SL ++ P L+ LF ++ R + ++ +P ++F Q I N+
Sbjct: 30 DVLGLEEESLGSVPAPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTIGNS 89
Query: 63 CATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLAINNSDAIRAAHNSFARP 119
C T ++ + N D + S LK+F T+ PE + ++AI+AAH++
Sbjct: 90 CGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKCFEKNEAIQAAHDA---- 145
Query: 120 EPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQ 179
V +E + D +HFI + VDG LYELDG P++ G + LQ
Sbjct: 146 ---VAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVN----HGASSEDSLLQDAA 198
Query: 180 PVIQERIERYSKSEIRFNLMAVIK 203
V +E ER + E+RF+ +A+ K
Sbjct: 199 KVCREFTER-EQGEVRFSAVALCK 221
>sp|P23356|UCHL1_BOVIN Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Bos taurus
GN=UCHL1 PE=1 SV=2
Length = 252
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 15/158 (9%)
Query: 49 NPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLAINN 105
+P ++F Q I N+C T ++ + N D + S LK+F T+ PE +
Sbjct: 105 SPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKCFEK 164
Query: 106 SDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPC 165
++AI+AAH++ V +E + D +HFI + VDG LYELDG P++ G
Sbjct: 165 NEAIQAAHDA-------VAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGTS 217
Query: 166 TGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 203
+ + LQ V +E ER + E+RF+ +A+ K
Sbjct: 218 S----EDSLLQDAAKVCREFTER-EQGEVRFSAVALCK 250
>sp|P50103|UCHL1_MONDO Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Monodelphis
domestica GN=UCHL1 PE=3 SV=2
Length = 223
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 10 ELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDR------VVIKDPNPNLFFASQVINNA 62
++ L+ D L + P L+ LF ++ R + ++ +P ++F Q + N+
Sbjct: 30 DVLGLEEDVLGTVPAPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTVGNS 89
Query: 63 CATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARP 119
C T ++ + N D D G L + T PE + ++AI+AAH++
Sbjct: 90 CGTIGLIHAVANNQDKLNFDDGSVLKQFISETAKLSPEDRAKCFEKNEAIQAAHDA---- 145
Query: 120 EPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQ 179
V +E + D+ +HFI + VDG LYELDG PI+ G D L+
Sbjct: 146 ---VAQEGQCRVDDEVNFHFILFNNVDGHLYELDGRMPFPIN----HGSNSDESVLKGAA 198
Query: 180 PVIQERIERYSKSEIRFNLMAVIK 203
+ ++ ER + E+RF+ +A+ K
Sbjct: 199 EICRQFTER-EEGEVRFSAVALCK 221
>sp|P09936|UCHL1_HUMAN Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Homo sapiens
GN=UCHL1 PE=1 SV=2
Length = 223
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 10 ELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDR------VVIKDPNPNLFFASQVINNA 62
++ L+ +SL ++ P L+ LF ++ R + ++ +P ++F Q I N+
Sbjct: 30 DVLGLEEESLGSVPAPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTIGNS 89
Query: 63 CATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLAINNSDAIRAAHNSFARP 119
C T ++ + N D + S LK+F T+ PE + ++AI+AAH++
Sbjct: 90 CGTIGLIHAVANNQDKLGFEDGSVLKQFLSETEKMSPEDRAKCFEKNEAIQAAHDA---- 145
Query: 120 EPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQ 179
V +E + D +HFI + VDG LYELDG P++ G + L+
Sbjct: 146 ---VAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVN----HGASSEDTLLKDAA 198
Query: 180 PVIQERIERYSKSEIRFNLMAVIK 203
V +E ER + E+RF+ +A+ K
Sbjct: 199 KVCREFTER-EQGEVRFSAVALCK 221
>sp|Q9GM50|UCHL1_HORSE Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Equus caballus
GN=UCHL1 PE=2 SV=2
Length = 223
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 24 PVYGLIFLFKWRPGEKDDR------VVIKDPNPNLFFASQVINNACATQAILSILLNCPD 77
P L+ LF ++ R + ++ +P ++F Q I N+C T ++ + N D
Sbjct: 45 PACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQD 104
Query: 78 IDIGPELSKLKEF---TKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDD 134
+ S LK+F T+ PE + ++AI+AAH++ V +E + D
Sbjct: 105 KLEFEDGSVLKQFLSETEKLSPEDRAKCFEKNEAIQAAHDA-------VAQEGQCRVDDK 157
Query: 135 DVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEI 194
+HFI + VDG LYELDG P++ G + LQ V +E ER + E+
Sbjct: 158 VNFHFILFNNVDGHLYELDGRMPFPVN----HGASSEDLLLQDAAKVCREFTER-EQGEV 212
Query: 195 RFNLMAVIK 203
RF+ +A+ K
Sbjct: 213 RFSAVALCK 221
>sp|Q54T48|UCHL_DICDI Probable ubiquitin carboxyl-terminal hydrolase OS=Dictyostelium
discoideum GN=uch1 PE=3 SV=1
Length = 255
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 52 LFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLAINNSDA 108
++F Q I NAC T ++ +LN ++ E K+F T + E + +++ +
Sbjct: 92 VYFMKQYIGNACGTIGVIHSVLNNANVIEFNENGFFKQFLDKTTSLSTEERAISLLKNSE 151
Query: 109 IRAAHN-SFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTG 167
I +H S + + VP+E + V HF+S++ VDG LYELDG K I+ G +
Sbjct: 152 IEKSHEISALQGQSNVPQEDEPV-----VLHFVSFVHVDGHLYELDGRKPFAINHGESSA 206
Query: 168 GQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVI 202
D ++Q +I E EIRFNLM ++
Sbjct: 207 ETLLKDTANVLQKMIDE-----DPKEIRFNLMGLV 236
>sp|O01391|UCHL_APLCA Ubiquitin carboxyl-terminal hydrolase OS=Aplysia californica GN=UCH
PE=2 SV=1
Length = 214
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 24/172 (13%)
Query: 5 GVQVEELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDRVVI--------KDPNPNLFFA 55
G +++ LD + L + RP L+ LF DD+ + D +L++
Sbjct: 29 GWNFVDVFGLDPELLAMVPRPAAALVLLFP------DDKETVNQLIGEYQSDYPDSLYYT 82
Query: 56 SQVINNACATQAILSILLNCPDI---DIGPELSKLKEFTKNFPPELKGLAINNSDAIRAA 112
Q I NAC T AI+ L N ++ D E TK PE + + + + AA
Sbjct: 83 KQTIGNACGTVAIVHALANNENVIPFDAAKHFKTFLEKTKPLNPEERAKHLEQDNLMGAA 142
Query: 113 HNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLG 163
H A+ + +A +D+ V HF++ + +G LYELDG KE P+ G
Sbjct: 143 HGDCAQEG-----DTQAPSQDEHVKSHFVALVHCNGTLYELDGRKEAPVVHG 189
>sp|Q10171|UBLH1_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=uch1 PE=3 SV=1
Length = 222
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 85/184 (46%), Gaps = 39/184 (21%)
Query: 1 MQVKGVQVEELYSLDLDSLNNL-----RPVYGLIFLFKWRPGE---KDDRVVIKDPNPNL 52
+Q GVQ ++ DL SL + RPV+ L+F+F + K R++ KD + L
Sbjct: 16 LQKIGVQDASVF--DLFSLEEIPEYIPRPVHALLFVFPSSGTKTIYKGSRILPKDSDKVL 73
Query: 53 FFASQVINNACATQAILSILLNCPDIDIGPELSKLKE--FTKNFPPELKGLAIN------ 104
++ Q I NAC T +L + N G K+ E F K+ +G +I
Sbjct: 74 WYP-QTIPNACGTIGLLHAVSN------GELRRKVNENDFIKSLIRTAEGSSIEERAKLI 126
Query: 105 -NSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV---YHFISYIPV----DGVLYELDGLK 156
+S + A H +FA P P + G ++DV HFI ++ D YELDG +
Sbjct: 127 EDSKELEALHAAFAGP-PL-----EVEGSEEDVETDLHFICFVKGKSKDDNHFYELDGRQ 180
Query: 157 EGPI 160
EGP+
Sbjct: 181 EGPV 184
>sp|P35127|UBL1_YEAST Ubiquitin carboxyl-terminal hydrolase YUH1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YUH1 PE=1
SV=1
Length = 236
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 16/174 (9%)
Query: 23 RPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINNACATQAILSILLNCPDI-DIG 81
RPV ++ LF K + ++ + Q + NAC AIL L N + + G
Sbjct: 50 RPVKAIVLLFPINEDRKSSTSQQITSSYDVIWFKQSVKNACGLYAILHSLSNNQSLLEPG 109
Query: 82 PELSKLKEFTKNFPPELKGLAINNSD-----AIRAAHNSFARPEPFVPEEQKAAGKDDDV 136
+L + + +D I+ +F+ + PE D
Sbjct: 110 SDLDNFLKSQSDTSSSKNRFDDVTTDQFVLNVIKENVQTFSTGQSEAPE-----ATADTN 164
Query: 137 YHFISYIPVDGVLYELDGLK-EGPISLGPCTGGQGDMDWLQMVQPVIQERIERY 189
H+I+Y+ +G ++ELDG GP+ LG D+ + Q +++ R+ Y
Sbjct: 165 LHYITYVEENGGIFELDGRNLSGPLYLGKSDPTATDL----IEQELVRVRVASY 214
>sp|A5WFW1|SYA_PSYWF Alanine--tRNA ligase OS=Psychrobacter sp. (strain PRwf-1) GN=alaS
PE=3 SV=1
Length = 903
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%)
Query: 202 IKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEK 261
+ +R + + +E +++ ER+ Q++AS Q+ +VD A K L AGI+G +
Sbjct: 755 VADRVQTMADKQRELEKQIERLNQKIASAQAATLVDNVQTIADKKVLIAQVAGIDGKAMR 814
Query: 262 ILMEEEKFK 270
L+++ K K
Sbjct: 815 GLIDDIKSK 823
>sp|B3CV54|RPOC_ORITI DNA-directed RNA polymerase subunit beta' OS=Orientia tsutsugamushi
(strain Ikeda) GN=rpoC PE=3 SV=1
Length = 1396
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 193 EIRFNLMAVIKNRKELYTAELKEFQRKRERILQQL--ASLQSERMVDKTSFEALNKSLSE 250
E + N AVI K+L L+E Q + ILQ + ASLQ+E + SF+ + L+E
Sbjct: 1279 EEKVNKRAVINTNKKLKAKGLREAQYRP--ILQGITKASLQTESFISAASFQETTRVLTE 1336
Query: 251 VNAGIEGATEKI 262
A I G +K+
Sbjct: 1337 --AAIAGKVDKL 1346
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,663,956
Number of Sequences: 539616
Number of extensions: 4951107
Number of successful extensions: 16232
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 15965
Number of HSP's gapped (non-prelim): 205
length of query: 315
length of database: 191,569,459
effective HSP length: 117
effective length of query: 198
effective length of database: 128,434,387
effective search space: 25430008626
effective search space used: 25430008626
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)