BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021249
(315 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/227 (44%), Positives = 144/227 (63%), Gaps = 4/227 (1%)
Query: 85 ELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGS 144
+L AT NF +G G FGKVYKG L +V A+K+ QG+ EF E+ TL
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKV-ALKRRTPESSQGIEEFETEIETLSF 91
Query: 145 ADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRG 204
HP+LV LIG+C E ++ +L+Y+YM G+L +HL+ T + W R++I GA+RG
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 205 LQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYC 264
L YLH + +I+RD+K NILL+E + PK++DFG++K G D+TH+ V GT GY
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAW 311
P+Y + G+LT KSD+YSFGVVL E++ R AI Q+ R+ +NL W
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEW 255
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/227 (44%), Positives = 143/227 (62%), Gaps = 4/227 (1%)
Query: 85 ELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGS 144
+L AT NF +G G FGKVYKG L +V A+K+ QG+ EF E+ TL
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKV-ALKRRTPESSQGIEEFETEIETLSF 91
Query: 145 ADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRG 204
HP+LV LIG+C E ++ +L+Y+YM G+L +HL+ T + W R++I GA+RG
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 205 LQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYC 264
L YLH + +I+RD+K NILL+E + PK++DFG++K G +TH+ V GT GY
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAW 311
P+Y + G+LT KSD+YSFGVVL E++ R AI Q+ R+ +NL W
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEW 255
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 181 bits (459), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 142/225 (63%), Gaps = 5/225 (2%)
Query: 79 KPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVR-EFSA 137
K F+ EL A+ NF + LG GGFGKVYKG L +VA+K+L QG +F
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD-GTLVAVKRLKEERXQGGELQFQT 84
Query: 138 EVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR-PLDWNTRMK 196
EV + A H NL++L G+C +RLLVY YM GS+ L + RP+++ PLDW R +
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE-RPESQPPLDWPKRQR 143
Query: 197 IAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTR 256
IA G++RGL YLH+ +I+RD+K +NILL+E + + DFGLAK+ D HV
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXA 202
Query: 257 VMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTK 301
V GT G+ AP+Y TG+ + K+D++ +GV+LLELITG++A D +
Sbjct: 203 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR 247
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/225 (44%), Positives = 141/225 (62%), Gaps = 5/225 (2%)
Query: 79 KPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVR-EFSA 137
K F+ EL A+ NF + LG GGFGKVYKG L +VA+K+L QG +F
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLAD-GXLVAVKRLKEERTQGGELQFQT 76
Query: 138 EVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR-PLDWNTRMK 196
EV + A H NL++L G+C +RLLVY YM GS+ L + RP+++ PLDW R +
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE-RPESQPPLDWPKRQR 135
Query: 197 IAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTR 256
IA G++RGL YLH+ +I+RD+K +NILL+E + + DFGLAK+ D HV
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXA 194
Query: 257 VMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTK 301
V G G+ AP+Y TG+ + K+D++ +GV+LLELITG++A D +
Sbjct: 195 VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR 239
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/236 (43%), Positives = 143/236 (60%), Gaps = 17/236 (7%)
Query: 81 FTFDELAAATGNFRSDCC------LGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGVQ 130
F+F EL T NF +GEGGFG VYKG + VA+K+L D +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN--TTVAVKKLAAMVDITTEE 72
Query: 131 GVREFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLD 190
++F E+ + H NLV+L+G+ ++GD LVY YMP GSL L L T PL
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLS 131
Query: 191 WNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDK 250
W+ R KIA GA+ G+ +LHE I+RD+K +NILL+E + K+SDFGLA+ +
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 251 THVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
T + +R++GT Y AP+ A+ G++T KSDIYSFGVVLLE+ITG A+D+ ++ + L
Sbjct: 189 TVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 243
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/236 (43%), Positives = 142/236 (60%), Gaps = 17/236 (7%)
Query: 81 FTFDELAAATGNFRSDCC------LGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGVQ 130
F+F EL T NF +GEGGFG VYKG + VA+K+L D +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN--TTVAVKKLAAMVDITTEE 72
Query: 131 GVREFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLD 190
++F E+ + H NLV+L+G+ ++GD LVY YMP GSL L L T PL
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLS 131
Query: 191 WNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDK 250
W+ R KIA GA+ G+ +LHE I+RD+K +NILL+E + K+SDFGLA+ +
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 251 THVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
T + R++GT Y AP+ A+ G++T KSDIYSFGVVLLE+ITG A+D+ ++ + L
Sbjct: 189 TVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 243
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 170 bits (431), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/236 (42%), Positives = 141/236 (59%), Gaps = 17/236 (7%)
Query: 81 FTFDELAAATGNFRSDCC------LGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGVQ 130
F+F EL T NF +GEGGFG VYKG + VA+K+L D +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN--TTVAVKKLAAMVDITTEE 66
Query: 131 GVREFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLD 190
++F E+ + H NLV+L+G+ ++GD LVY YMP GSL L L T PL
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLS 125
Query: 191 WNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDK 250
W+ R KIA GA+ G+ +LHE I+RD+K +NILL+E + K+SDFGLA+ +
Sbjct: 126 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 251 THVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+ R++GT Y AP+ A+ G++T KSDIYSFGVVLLE+ITG A+D+ ++ + L
Sbjct: 183 XVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 237
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 138/236 (58%), Gaps = 17/236 (7%)
Query: 81 FTFDELAAATGNFRSDCC------LGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGVQ 130
F+F EL T NF GEGGFG VYKG + VA+K+L D +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEE 63
Query: 131 GVREFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLD 190
++F E+ H NLV+L+G+ ++GD LVY Y P GSL L L T PL
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLD-GTPPLS 122
Query: 191 WNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDK 250
W+ R KIA GA+ G+ +LHE I+RD+K +NILL+E + K+SDFGLA+ +
Sbjct: 123 WHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 251 THVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+R++GT Y AP+ A+ G++T KSDIYSFGVVLLE+ITG A+D+ ++ + L
Sbjct: 180 XVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 234
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 114/215 (53%), Gaps = 25/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQL---DHRG----VQGVREFSAEVMTLGSADHPNLV 151
+G+GGFG V+KG L K + VVAIK L D G ++ +EF EV + + +HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
KL G + +V E++P G L H L P+ W+ ++++ + G++Y+ Q
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDL---YHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 212 LKQPVIYRDLKCSNILLEE-----GYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
P+++RDL+ NI L+ K++DFGL++ H + ++G + + AP
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 267 DY--AMTGQLTFKSDIYSFGVVLLELITGRKAIDQ 299
+ A T K+D YSF ++L ++TG D+
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 113/215 (52%), Gaps = 25/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQL---DHRG----VQGVREFSAEVMTLGSADHPNLV 151
+G+GGFG V+KG L K + VVAIK L D G ++ +EF EV + + +HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
KL G + +V E++P G L H L P+ W+ ++++ + G++Y+ Q
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDL---YHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 212 LKQPVIYRDLKCSNILLEE-----GYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
P+++RDL+ NI L+ K++DFG ++ H + ++G + + AP
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 267 DY--AMTGQLTFKSDIYSFGVVLLELITGRKAIDQ 299
+ A T K+D YSF ++L ++TG D+
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 113/215 (52%), Gaps = 25/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQL---DHRG----VQGVREFSAEVMTLGSADHPNLV 151
+G+GGFG V+KG L K + VVAIK L D G ++ +EF EV + + +HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
KL G + +V E++P G L H L P+ W+ ++++ + G++Y+ Q
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDL---YHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 212 LKQPVIYRDLKCSNILLEE-----GYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
P+++RDL+ NI L+ K++DF L++ H + ++G + + AP
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 267 DY--AMTGQLTFKSDIYSFGVVLLELITGRKAIDQ 299
+ A T K+D YSF ++L ++TG D+
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 99 LGEGGFGKV-----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL 153
LGEG FGKV Y C E+ + +VA+K L ++F E L + H ++VK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT---------RPLDWNTRMKIAAGASRG 204
G C EGD ++V+EYM G L+K L PD L + + IA + G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 205 LQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYC 264
+ YL Q ++RDL N L+ E K+ DFG+++ S D V M +
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELIT 292
P+ M + T +SD++S GVVL E+ T
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 4/194 (2%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G G FG V++ + V I + V EF EV + HPN+V +G
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+ +V EY+ GSL + LH + LD R+ +A ++G+ YLH + P+++
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNYLHNR-NPPIVH 162
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDLK N+L+++ Y K+ DFGL+++ S S GT + AP+ KS
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRLKAS--XFLXSKXAAGTPEWMAPEVLRDEPSNEKS 220
Query: 279 DIYSFGVVLLELIT 292
D+YSFGV+L EL T
Sbjct: 221 DVYSFGVILWELAT 234
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 6/195 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G G FG V++ + V I + V EF EV + HPN+V +G
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+ +V EY+ GSL + LH + LD R+ +A ++G+ YLH + P+++
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNYLHNR-NPPIVH 162
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTR-VMGTYGYCAPDYAMTGQLTFK 277
R+LK N+L+++ Y K+ DFGL+++ S T +S++ GT + AP+ K
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRLKAS---TFLSSKSAAGTPEWMAPEVLRDEPSNEK 219
Query: 278 SDIYSFGVVLLELIT 292
SD+YSFGV+L EL T
Sbjct: 220 SDVYSFGVILWELAT 234
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 18/209 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
R LG G FG V+KG E I+ V IK + D G Q + + ++ +GS D
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 91
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
H ++V+L+G C G LV +Y+PLGSL H+ R P L+W ++ ++
Sbjct: 92 HAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AK 144
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL E +++R+L N+LL+ +++DFG+A + P DK + + +
Sbjct: 145 GMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 201
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
A + G+ T +SD++S+GV + EL+T
Sbjct: 202 MALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 18/209 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
R LG G FG V+KG E I+ V IK + D G Q + + ++ +GS D
Sbjct: 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 73
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
H ++V+L+G C G LV +Y+PLGSL H+ R P L+W ++ ++
Sbjct: 74 HAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AK 126
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL E +++R+L N+LL+ +++DFG+A + P DK + + +
Sbjct: 127 GMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 183
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
A + G+ T +SD++S+GV + EL+T
Sbjct: 184 MALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 15/213 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV--QGVREFSAEVMTLGSADHPNLVKLIGY 156
+G G FG VYKG K VA+K L+ Q ++ F EV L H N++ +GY
Sbjct: 20 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
+ Q +V ++ SL HLH + + IA +RG+ YLH + +
Sbjct: 77 STK-PQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLH---AKSI 129
Query: 217 IYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM---TGQ 273
I+RDLK +NI L E K+ DFGLA + +H ++ G+ + AP+ +
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 274 LTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+F+SD+Y+FG+VL EL+TG+ +R ++
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 222
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 20/228 (8%)
Query: 99 LGEGGFGKVYKG-----CLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL 153
LGEG FGKV+ E+ + +VA+K L ++F E L H ++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR-----------PLDWNTRMKIAAGAS 202
G C EG L+V+EYM G L++ L PD + PL + +A+ +
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
G+ YL ++RDL N L+ +G K+ DFG+++ S D V R M
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 263 YCAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
+ P+ + + T +SD++SFGVVL E+ T G++ Q + + ++ +
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 244
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 20/228 (8%)
Query: 99 LGEGGFGKVYKG-----CLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL 153
LGEG FGKV+ E+ + +VA+K L ++F E L H ++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR-----------PLDWNTRMKIAAGAS 202
G C EG L+V+EYM G L++ L PD + PL + +A+ +
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
G+ YL ++RDL N L+ +G K+ DFG+++ S D V R M
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 263 YCAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
+ P+ + + T +SD++SFGVVL E+ T G++ Q + + ++ +
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 250
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 20/228 (8%)
Query: 99 LGEGGFGKVYKG-----CLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL 153
LGEG FGKV+ E+ + +VA+K L ++F E L H ++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR-----------PLDWNTRMKIAAGAS 202
G C EG L+V+EYM G L++ L PD + PL + +A+ +
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
G+ YL ++RDL N L+ +G K+ DFG+++ S D V R M
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 263 YCAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
+ P+ + + T +SD++SFGVVL E+ T G++ Q + + ++ +
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 273
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG+G FG V Y + +VVA+K+L H + +R+F E+ L S H N+VK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 155 GYCAEGDQR--LLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G C +R L+ EY+P GSL +L H R D L ++ + +G++YL
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLG- 130
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--TYGYCAPDY 268
+ I+RDL NIL+E K+ DFGL K+ P DK + G + AP+
Sbjct: 131 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 187
Query: 269 AMTGQLTFKSDIYSFGVVLLELIT 292
+ + SD++SFGVVL EL T
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFT 211
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG+G FG V Y + +VVA+K+L H + +R+F E+ L S H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 155 GYCAEGDQR--LLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G C +R L+ EY+P GSL +L H R D L ++ + +G++YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLG- 131
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--TYGYCAPDY 268
+ I+RDL NIL+E K+ DFGL K+ P DK + G + AP+
Sbjct: 132 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEFFKVKEPGESPIFWYAPES 188
Query: 269 AMTGQLTFKSDIYSFGVVLLELIT 292
+ + SD++SFGVVL EL T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG+G FG V Y + +VVA+K+L H + +R+F E+ L S H N+VK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 155 GYCAEGDQR--LLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G C +R L+ EY+P GSL +L H R D L ++ + +G++YL
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLG- 136
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--TYGYCAPDY 268
+ I+RDL NIL+E K+ DFGL K+ P DK + G + AP+
Sbjct: 137 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 193
Query: 269 AMTGQLTFKSDIYSFGVVLLELIT 292
+ + SD++SFGVVL EL T
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFT 217
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 108/213 (50%), Gaps = 35/213 (16%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDH-------RGVQGVREFSAEVMTLGSADHPNLV 151
+G GGFGKVY+ I VA+K H + ++ VR+ E HPN++
Sbjct: 15 IGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQ---EAKLFAMLKHPNII 69
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLR-PDTRPLDWNTRMKIAAGASRGLQYLHE 210
L G C + LV E+ G L++ L R P ++W ++ +RG+ YLH+
Sbjct: 70 ALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ARGMNYLHD 123
Query: 211 QLKQPVIYRDLKCSNILLEEGYHP--------KLSDFGLAKMGPSGDKTHVSTRV--MGT 260
+ P+I+RDLK SNIL+ + K++DFGLA+ + H +T++ G
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------EWHRTTKMSAAGA 177
Query: 261 YGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y + AP+ + SD++S+GV+L EL+TG
Sbjct: 178 YAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG+G FG V Y + +VVA+K+L H + +R+F E+ L S H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 155 GYCAEGDQR--LLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G C +R L+ EY+P GSL +L H R D L ++ + +G++YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLG- 131
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--TYGYCAPDY 268
+ I+RDL NIL+E K+ DFGL K+ P DK + G + AP+
Sbjct: 132 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 188
Query: 269 AMTGQLTFKSDIYSFGVVLLELIT 292
+ + SD++SFGVVL EL T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG+G FG V Y + +VVA+K+L H + +R+F E+ L S H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 155 GYCAEGDQR--LLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G C +R L+ EY+P GSL +L H R D L ++ + +G++YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLG- 134
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--TYGYCAPDY 268
+ I+RDL NIL+E K+ DFGL K+ P DK + G + AP+
Sbjct: 135 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 191
Query: 269 AMTGQLTFKSDIYSFGVVLLELIT 292
+ + SD++SFGVVL EL T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG+G FG V Y + +VVA+K+L H + +R+F E+ L S H N+VK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 155 GYCAEGDQR--LLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G C +R L+ EY+P GSL +L H R D L ++ + +G++YL
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLG- 137
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--TYGYCAPDY 268
+ I+RDL NIL+E K+ DFGL K+ P DK + G + AP+
Sbjct: 138 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 194
Query: 269 AMTGQLTFKSDIYSFGVVLLELIT 292
+ + SD++SFGVVL EL T
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFT 218
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 15/213 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV--QGVREFSAEVMTLGSADHPNLVKLIGY 156
+G G FG VYKG K VA+K L+ Q ++ F EV L H N++ +GY
Sbjct: 32 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
+ Q +V ++ SL HLH + + IA +RG+ YLH + +
Sbjct: 89 -STAPQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLH---AKSI 141
Query: 217 IYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM---TGQ 273
I+RDLK +NI L E K+ DFGLA +H ++ G+ + AP+ +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 274 LTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+F+SD+Y+FG+VL EL+TG+ +R ++
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG+G FG V Y + +VVA+K+L H + +R+F E+ L S H N+VK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 155 GYCAEGDQR--LLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G C +R L+ EY+P GSL +L H R D L ++ + +G++YL
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLG- 129
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--TYGYCAPDY 268
+ I+RDL NIL+E K+ DFGL K+ P DK + G + AP+
Sbjct: 130 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 186
Query: 269 AMTGQLTFKSDIYSFGVVLLELIT 292
+ + SD++SFGVVL EL T
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFT 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG+G FG V Y + +VVA+K+L H + +R+F E+ L S H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 155 GYCAEGDQR--LLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G C +R L+ EY+P GSL +L H R D L ++ + +G++YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLG- 131
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--TYGYCAPDY 268
+ I+RDL NIL+E K+ DFGL K+ P DK + G + AP+
Sbjct: 132 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 188
Query: 269 AMTGQLTFKSDIYSFGVVLLELIT 292
+ + SD++SFGVVL EL T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 15/213 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV--QGVREFSAEVMTLGSADHPNLVKLIGY 156
+G G FG VYKG K VA+K L+ Q ++ F EV L H N++ +GY
Sbjct: 32 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
+ Q +V ++ SL HLH + + IA +RG+ YLH + +
Sbjct: 89 STK-PQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLH---AKSI 141
Query: 217 IYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM---TGQ 273
I+RDLK +NI L E K+ DFGLA +H ++ G+ + AP+ +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 274 LTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+F+SD+Y+FG+VL EL+TG+ +R ++
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG+G FG V Y + +VVA+K+L H + +R+F E+ L S H N+VK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 155 GYCAEGDQR--LLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G C +R L+ EY+P GSL +L H R D L ++ + +G++YL
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLG- 138
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--TYGYCAPDY 268
+ I+RDL NIL+E K+ DFGL K+ P DK + G + AP+
Sbjct: 139 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 195
Query: 269 AMTGQLTFKSDIYSFGVVLLELIT 292
+ + SD++SFGVVL EL T
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFT 219
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG+G FG V Y + +VVA+K+L H + +R+F E+ L S H N+VK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 155 GYCAEGDQR--LLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G C +R L+ EY+P GSL +L H R D L ++ + +G++YL
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLG- 135
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--TYGYCAPDY 268
+ I+RDL NIL+E K+ DFGL K+ P DK + G + AP+
Sbjct: 136 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 192
Query: 269 AMTGQLTFKSDIYSFGVVLLELIT 292
+ + SD++SFGVVL EL T
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFT 216
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG+G FG V Y + +VVA+K+L H + +R+F E+ L S H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 155 GYCAEGDQR--LLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
G C +R L+ EY+P GSL + L+ +D ++ + +G++YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQAHAERIDHIKLLQYTSQICKGMEYLG--- 134
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--TYGYCAPDYAM 270
+ I+RDL NIL+E K+ DFGL K+ P DK + G + AP+
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 193
Query: 271 TGQLTFKSDIYSFGVVLLELIT 292
+ + SD++SFGVVL EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG+G FG V Y + +VVA+K+L H + +R+F E+ L S H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 155 GYCAEGDQR--LLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G C +R L+ E++P GSL ++L H R D L ++ + +G++YL
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKL-----LQYTSQICKGMEYLG- 134
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--TYGYCAPDY 268
+ I+RDL NIL+E K+ DFGL K+ P DK + G + AP+
Sbjct: 135 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 191
Query: 269 AMTGQLTFKSDIYSFGVVLLELIT 292
+ + SD++SFGVVL EL T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG+G FG V Y + +VVA+K+L H + +R+F E+ L S H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 155 GYCAEGDQR--LLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G C +R L+ EY+P GSL +L H R D L ++ + +G++YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLG- 149
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--TYGYCAPDY 268
+ I+RDL NIL+E K+ DFGL K+ P DK + G + AP+
Sbjct: 150 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 206
Query: 269 AMTGQLTFKSDIYSFGVVLLELIT 292
+ + SD++SFGVVL EL T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG+G FG V Y + +VVA+K+L H + +R+F E+ L S H N+VK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 155 GYCAEGDQR--LLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G C +R L+ EY+P GSL +L H R D L ++ + +G++YL
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLG- 162
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--TYGYCAPDY 268
+ I+RDL NIL+E K+ DFGL K+ P DK + G + AP+
Sbjct: 163 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 219
Query: 269 AMTGQLTFKSDIYSFGVVLLELIT 292
+ + SD++SFGVVL EL T
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFT 243
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG+G FG V Y + +VVA+K+L H + +R+F E+ L S H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 155 GYCAEGDQR--LLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G C +R L+ EY+P GSL +L H R D L ++ + +G++YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLG- 149
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--TYGYCAPDY 268
+ I+RDL NIL+E K+ DFGL K+ P DK + G + AP+
Sbjct: 150 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 206
Query: 269 AMTGQLTFKSDIYSFGVVLLELIT 292
+ + SD++SFGVVL EL T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG+G FG V Y + +VVA+K+L H + +R+F E+ L S H N+VK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 155 GYCAEGDQR--LLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G C +R L+ EY+P GSL +L H R D L ++ + +G++YL
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLG- 132
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--TYGYCAPDY 268
+ I+R+L NIL+E K+ DFGL K+ P DK + + G + AP+
Sbjct: 133 --TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQ-DKEYYKVKEPGESPIFWYAPES 189
Query: 269 AMTGQLTFKSDIYSFGVVLLELIT 292
+ + SD++SFGVVL EL T
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFT 213
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G FG+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + + + +A S ++YL K+ I+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 132
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 15/213 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV--QGVREFSAEVMTLGSADHPNLVKLIGY 156
+G G FG VYKG K VA+K L+ Q ++ F EV L H N++ +GY
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
+ Q +V ++ SL HLH + + + IA ++G+ YLH + +
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAK---SI 153
Query: 217 IYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMT---GQ 273
I+RDLK +NI L E K+ DFGLA + +H ++ G+ + AP+
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 274 LTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+F+SD+Y+FG+VL EL+TG+ +R ++
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 110/213 (51%), Gaps = 15/213 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV--QGVREFSAEVMTLGSADHPNLVKLIGY 156
+G G FG VYKG K VA+K L+ Q ++ F EV L H N++ +GY
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
+ Q +V ++ SL HLH + +T+ + + IA ++G+ YLH + +
Sbjct: 73 -STAPQLAIVTQWCEGSSLYHHLHII--ETK-FEMIKLIDIARQTAQGMDYLHAK---SI 125
Query: 217 IYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMT---GQ 273
I+RDLK +NI L E K+ DFGLA + +H ++ G+ + AP+
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 274 LTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+F+SD+Y+FG+VL EL+TG+ +R ++
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 110/213 (51%), Gaps = 15/213 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV--QGVREFSAEVMTLGSADHPNLVKLIGY 156
+G G FG VYKG K VA+K L+ Q ++ F EV L H N++ +GY
Sbjct: 18 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
+ Q +V ++ SL HLH + +T+ + + IA ++G+ YLH + +
Sbjct: 75 STK-PQLAIVTQWCEGSSLYHHLHII--ETK-FEMIKLIDIARQTAQGMDYLHAK---SI 127
Query: 217 IYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMT---GQ 273
I+RDLK +NI L E K+ DFGLA + +H ++ G+ + AP+
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 274 LTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+F+SD+Y+FG+VL EL+TG+ +R ++
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 220
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 15/213 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV--QGVREFSAEVMTLGSADHPNLVKLIGY 156
+G G FG VYKG K VA+K L+ Q ++ F EV L H N++ +GY
Sbjct: 43 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
+ Q +V ++ SL HLH + + + IA ++G+ YLH + +
Sbjct: 100 STK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAK---SI 152
Query: 217 IYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMT---GQ 273
I+RDLK +NI L E K+ DFGLA + +H ++ G+ + AP+
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 212
Query: 274 LTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+F+SD+Y+FG+VL EL+TG+ +R ++
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 245
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 118/221 (53%), Gaps = 19/221 (8%)
Query: 98 CLGEGGFGKVYKGCL----EKIEQVVAIKQLDHR-GVQGVREFSAEVMTLGSADHPNLVK 152
LG G FG VYKG E ++ VAIK L+ G + EF E + + S DHP+LV+
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASRGLQYLH 209
L+G C +L V + MP G L +++H+ + + L+W ++ ++G+ YL
Sbjct: 82 LLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLE 134
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
E+ +++RDL N+L++ H K++DFGLA++ +K + + + A +
Sbjct: 135 ERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 270 MTGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
+ T +SD++S+GV + EL+T G K D R+ +L+
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL 232
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 15/213 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV--QGVREFSAEVMTLGSADHPNLVKLIGY 156
+G G FG VYKG K VA+K L+ Q ++ F EV L H N++ +GY
Sbjct: 21 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
+ Q +V ++ SL HLH + + + IA ++G+ YLH + +
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAK---SI 130
Query: 217 IYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMT---GQ 273
I+RDLK +NI L E K+ DFGLA + +H ++ G+ + AP+
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 274 LTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+F+SD+Y+FG+VL EL+TG+ +R ++
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 110/213 (51%), Gaps = 15/213 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV--QGVREFSAEVMTLGSADHPNLVKLIGY 156
+G G FG VYKG K VA+K L+ Q ++ F EV L H N++ +GY
Sbjct: 21 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
+ Q +V ++ SL HLH + +T+ + + IA ++G+ YLH + +
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHLHII--ETK-FEMIKLIDIARQTAQGMDYLHAK---SI 130
Query: 217 IYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMT---GQ 273
I+RDLK +NI L E K+ DFGLA + +H ++ G+ + AP+
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 274 LTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+F+SD+Y+FG+VL EL+TG+ +R ++
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 110/213 (51%), Gaps = 15/213 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV--QGVREFSAEVMTLGSADHPNLVKLIGY 156
+G G FG VYKG K VA+K L+ Q ++ F EV L H N++ +GY
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
+ Q +V ++ SL HLH + +T+ + + IA ++G+ YLH + +
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHLHII--ETK-FEMIKLIDIARQTAQGMDYLHAK---SI 125
Query: 217 IYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMT---GQ 273
I+RDLK +NI L E K+ DFGLA + +H ++ G+ + AP+
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 274 LTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+F+SD+Y+FG+VL EL+TG+ +R ++
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + ++ + +A S ++YL K+ I+
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 135
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 195 DVWAFGVLLWEIAT 208
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDL-RPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVI 217
+V EYMP G+L +L + R + + + +A S ++YL K+ I
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAV---VLLYMATQISSAMEYLE---KKNFI 152
Query: 218 YRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFK 277
+RDL N L+ E + K++DFGL+++ +GD + AP+ + K
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNTFSIK 211
Query: 278 SDIYSFGVVLLELIT 292
SD+++FGV+L E+ T
Sbjct: 212 SDVWAFGVLLWEIAT 226
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 118/221 (53%), Gaps = 19/221 (8%)
Query: 98 CLGEGGFGKVYKGCL----EKIEQVVAIKQLDHR-GVQGVREFSAEVMTLGSADHPNLVK 152
LG G FG VYKG E ++ VAIK L+ G + EF E + + S DHP+LV+
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASRGLQYLH 209
L+G C +L V + MP G L +++H+ + + L+W ++ ++G+ YL
Sbjct: 105 LLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLE 157
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
E+ +++RDL N+L++ H K++DFGLA++ +K + + + A +
Sbjct: 158 ERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 214
Query: 270 MTGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
+ T +SD++S+GV + EL+T G K D R+ +L+
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL 255
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + ++ + +A S ++YL K+ I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 139
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + ++ + +A S ++YL K+ I+
Sbjct: 81 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 135
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 195 DVWAFGVLLWEIAT 208
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 99 LGEGGFGKV-----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL 153
LGEG FGKV Y K + +VA+K L + ++F E L + H ++VK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT------RP------LDWNTRMKIAAGA 201
G C +GD ++V+EYM G L+K L PD +P L + + IA+
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 202 SRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTY 261
+ G+ YL Q ++RDL N L+ K+ DFG+++ S D V M
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 262 GYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ P+ M + T +SD++SFGV+L E+ T
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + ++ + +A S ++YL K+ I+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 136
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + ++ + +A S ++YL K+ I+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 136
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + ++ + +A S ++YL K+ I+
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 139
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + ++ + +A S ++YL K+ I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 139
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + ++ + +A S ++YL K+ I+
Sbjct: 93 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 147
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 207 DVWAFGVLLWEIAT 220
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + ++ + +A S ++YL K+ I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 139
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + ++ + +A S ++YL K+ I+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 136
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + + + +A S ++YL K+ I+
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 132
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + ++ + +A S ++YL K+ I+
Sbjct: 84 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 138
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 198 DVWAFGVLLWEIAT 211
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 15/213 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV--QGVREFSAEVMTLGSADHPNLVKLIGY 156
+G G FG VYKG K VA+K L+ Q ++ F EV L H N++ +GY
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
+ Q +V ++ SL HLH + + + IA ++G+ YLH + +
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAK---SI 153
Query: 217 IYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMT---GQ 273
I+RDLK +NI L E K+ DFGLA +H ++ G+ + AP+
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 274 LTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+F+SD+Y+FG+VL EL+TG+ +R ++
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 109/213 (51%), Gaps = 15/213 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV--QGVREFSAEVMTLGSADHPNLVKLIGY 156
+G G FG VYKG K VA+K L+ Q ++ F EV L H N++ +GY
Sbjct: 36 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
+ Q +V ++ SL HLH + +T+ + + IA ++G+ YLH + +
Sbjct: 93 STK-PQLAIVTQWCEGSSLYHHLHII--ETK-FEMIKLIDIARQTAQGMDYLHAK---SI 145
Query: 217 IYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMT---GQ 273
I+RDLK +NI L E K+ DFGLA +H ++ G+ + AP+
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 205
Query: 274 LTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+F+SD+Y+FG+VL EL+TG+ +R ++
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 238
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + ++ + +A S ++YL K+ I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + ++ + +A S ++YL K+ I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + + + +A S ++YL K+ I+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 109/213 (51%), Gaps = 15/213 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV--QGVREFSAEVMTLGSADHPNLVKLIGY 156
+G G FG VYKG K VA+K L+ Q ++ F EV L H N++ +GY
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
+ Q +V ++ SL HLH + +T+ + + IA ++G+ YLH + +
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHLHII--ETK-FEMIKLIDIARQTAQGMDYLHAK---SI 125
Query: 217 IYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMT---GQ 273
I+RDLK +NI L E K+ DFGLA +H ++ G+ + AP+
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 274 LTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+F+SD+Y+FG+VL EL+TG+ +R ++
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + + + +A S ++YL K+ I+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + + + +A S ++YL K+ I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 139
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + + + +A S ++YL K+ I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + + + +A S ++YL K+ I+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 132
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + + + +A S ++YL K+ I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G G FG VYKG V +K +D Q + F EV L H N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQ-FQAFRNEVAVLRKTRHVNILLFMGYMT 102
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+ D +V ++ SL KHLH + + IA ++G+ YLH + +I+
Sbjct: 103 K-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQ---LIDIARQTAQGMDYLHAK---NIIH 155
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM---TGQLT 275
RD+K +NI L EG K+ DFGLA + + + G+ + AP+ +
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
Query: 276 FKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
F+SD+YS+G+VL EL+TG +R ++
Sbjct: 216 FQSDVYSYGIVLYELMTGELPYSHINNRDQI 246
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + ++ + +A S ++YL K+ I+
Sbjct: 284 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 338
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
R+L N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 397
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 398 DVWAFGVLLWEIAT 411
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + ++ + +A S ++YL K+ I+
Sbjct: 326 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 380
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
R+L N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 439
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 440 DVWAFGVLLWEIAT 453
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G +G+VY+G +K VA+K L ++ V EF E + HPNLV+L+G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
++ E+M G+L +L + + + + + +A S ++YL K+ I+
Sbjct: 287 REPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 341
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
R+L N L+ E + K++DFGL+++ +GD + AP+ + + KS
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 400
Query: 279 DIYSFGVVLLELIT 292
D+++FGV+L E+ T
Sbjct: 401 DVWAFGVLLWEIAT 414
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 104/221 (47%), Gaps = 29/221 (13%)
Query: 98 CLGEGGFGKVYKGCLEKIE-----QVVAIKQL-DHRGVQGVREFSAEVMTLGSADHPNLV 151
LGEG FGKV K ++ VA+K L ++ +R+ +E L +HP+++
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLR--------------------PDTRPLDW 191
KL G C++ LL+ EY GSL L + R PD R L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 192 NTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT 251
+ A S+G+QYL E +++RDL NIL+ EG K+SDFGL++ D
Sbjct: 150 GDLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 252 HVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
++ + A + T +SD++SFGV+L E++T
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 104/221 (47%), Gaps = 29/221 (13%)
Query: 98 CLGEGGFGKVYKGCLEKIE-----QVVAIKQL-DHRGVQGVREFSAEVMTLGSADHPNLV 151
LGEG FGKV K ++ VA+K L ++ +R+ +E L +HP+++
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLR--------------------PDTRPLDW 191
KL G C++ LL+ EY GSL L + R PD R L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 192 NTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT 251
+ A S+G+QYL E +++RDL NIL+ EG K+SDFGL++ D
Sbjct: 150 GDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 252 HVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
++ + A + T +SD++SFGV+L E++T
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 104/221 (47%), Gaps = 29/221 (13%)
Query: 98 CLGEGGFGKVYKGCLEKIE-----QVVAIKQL-DHRGVQGVREFSAEVMTLGSADHPNLV 151
LGEG FGKV K ++ VA+K L ++ +R+ +E L +HP+++
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLR--------------------PDTRPLDW 191
KL G C++ LL+ EY GSL L + R PD R L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 192 NTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT 251
+ A S+G+QYL E +++RDL NIL+ EG K+SDFGL++ D
Sbjct: 150 GDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 252 HVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
++ + A + T +SD++SFGV+L E++T
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 102/205 (49%), Gaps = 19/205 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G G FG V K + VAIKQ++ + + F E+ L +HPN+VKL G C
Sbjct: 17 VGRGAFGVVCKAKWRAKD--VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL 72
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR---MKIAAGASRGLQYLHEQLKQP 215
+ LV EY GSL LH PL + T M S+G+ YLH +
Sbjct: 73 --NPVCLVMEYAEGGSLYNVLHG----AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 216 VIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK N+LL G K+ DFG A +TH+ T G+ + AP+
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWMAPEVFEGSNY 181
Query: 275 TFKSDIYSFGVVLLELITGRKAIDQ 299
+ K D++S+G++L E+IT RK D+
Sbjct: 182 SEKCDVFSWGIILWEVITRRKPFDE 206
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 102/205 (49%), Gaps = 19/205 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G G FG V K + VAIKQ++ + + F E+ L +HPN+VKL G C
Sbjct: 16 VGRGAFGVVCKAKWRAKD--VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL 71
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR---MKIAAGASRGLQYLHEQLKQP 215
+ LV EY GSL LH PL + T M S+G+ YLH +
Sbjct: 72 --NPVCLVMEYAEGGSLYNVLHG----AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 216 VIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK N+LL G K+ DFG A +TH+ T G+ + AP+
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWMAPEVFEGSNY 180
Query: 275 TFKSDIYSFGVVLLELITGRKAIDQ 299
+ K D++S+G++L E+IT RK D+
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPFDE 205
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 29/220 (13%)
Query: 99 LGEGGFGKVYK----GCLE-KIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADHPNLVK 152
+GEG FG+V++ G L + +VA+K L ++ +F E + D+PN+VK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT--------------------RPLDWN 192
L+G CA G L++EYM G L++ L + P T PL
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 193 TRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTH 252
++ IA + G+ YL E + ++RDL N L+ E K++DFGL++ S D
Sbjct: 175 EQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 253 VSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ P+ + T +SD++++GVVL E+ +
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG+G FGKVYK ++ + A K +D + + + ++ E+ L S DHPN+VKL+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+ ++ E+ G++D + +L RPL + + L YLH+ +I+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLHD---NKIIH 158
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTR---VMGTYGYCAPDYAMTGQ-- 273
RDLK NIL KL+DFG+ S T R +GT + AP+ M
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGV-----SAKNTRTIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 274 ---LTFKSDIYSFGVVLLEL 290
+K+D++S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
+G+G FG+VYKG ++VVAIK +D + + E+ L D P + + G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 158 AEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVI 217
+ + ++ EY+ GS L L+P PL+ I +GL YLH + K I
Sbjct: 87 LKSTKLWIIMEYLGGGSA---LDLLKPG--PLEETYIATILREILKGLDYLHSERK---I 138
Query: 218 YRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFK 277
+RD+K +N+LL E KL+DFG+A G D +GT + AP+ FK
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFK 196
Query: 278 SDIYSFGVVLLELITG 293
+DI+S G+ +EL G
Sbjct: 197 ADIWSLGITAIELAKG 212
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 10/196 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LGEG +G VYK ++ Q+VAIKQ+ ++E E+ + D P++VK G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+ +V EY GS+ +R + L + I +GL+YLH K I+
Sbjct: 95 KNTDLWIVMEYCGAGSVSD---IIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IH 148
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RD+K NILL H KL+DFG+A G D V+GT + AP+ +
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVA 206
Query: 279 DIYSFGVVLLELITGR 294
DI+S G+ +E+ G+
Sbjct: 207 DIWSLGITAIEMAEGK 222
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG+G FGKVYK ++ + A K +D + + + ++ E+ L S DHPN+VKL+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+ ++ E+ G++D + +L RPL + + L YLH+ +I+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLHD---NKIIH 158
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTR---VMGTYGYCAPDYAMTGQ-- 273
RDLK NIL KL+DFG+ S T R +GT + AP+ M
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGV-----SAKNTRXIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 274 ---LTFKSDIYSFGVVLLEL 290
+K+D++S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG+G FGKVYK ++ + A K +D + + + ++ E+ L S DHPN+VKL+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+ ++ E+ G++D + +L RPL + + L YLH+ +I+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLHD---NKIIH 158
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTR---VMGTYGYCAPDYAMTGQ-- 273
RDLK NIL KL+DFG+ S T R +GT + AP+ M
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGV-----SAKNTRXIQRRDXFIGTPYWMAPEVVMCETSK 213
Query: 274 ---LTFKSDIYSFGVVLLEL 290
+K+D++S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG+G FG V Y + +VA+KQL H G R+F E+ L + +VK
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 155 GYC-AEGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
G G Q L LV EY+P G L L R LD + + ++ +G++YL +
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGSRR 134
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--TYGYCAPDYAM 270
++RDL NIL+E H K++DFGLAK+ P DK + R G + AP+
Sbjct: 135 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLS 190
Query: 271 TGQLTFKSDIYSFGVVLLELIT 292
+ +SD++SFGVVL EL T
Sbjct: 191 DNIFSRQSDVWSFGVVLYELFT 212
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 99/219 (45%), Gaps = 14/219 (6%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSA-DH 147
+F LG+G FGKV+ +K Q AIK L V V E L A +H
Sbjct: 19 DFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 78
Query: 148 PNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
P L + + V EY+ G L H+ D + AA GLQ+
Sbjct: 79 PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQF 134
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + ++YRDLK NILL++ H K++DFG+ K GD + GT Y AP+
Sbjct: 135 LH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNEFCGTPDYIAPE 189
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+ + D +SFGV+L E++ G+ +D +EL
Sbjct: 190 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPF-HGQDEEEL 227
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG+G FG V Y + +VA+KQL H G R+F E+ L + +VK
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 155 GYC-AEGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
G G Q L LV EY+P G L L R LD + + ++ +G++YL +
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGSRR 135
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--TYGYCAPDYAM 270
++RDL NIL+E H K++DFGLAK+ P DK + R G + AP+
Sbjct: 136 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLS 191
Query: 271 TGQLTFKSDIYSFGVVLLELIT 292
+ +SD++SFGVVL EL T
Sbjct: 192 DNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG+G FG V Y + +VA+KQL H G R+F E+ L + +VK
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 155 GYC-AEGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
G G Q L LV EY+P G L L R LD + + ++ +G++YL +
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGSRR 147
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--TYGYCAPDYAM 270
++RDL NIL+E H K++DFGLAK+ P DK + R G + AP+
Sbjct: 148 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLS 203
Query: 271 TGQLTFKSDIYSFGVVLLELIT 292
+ +SD++SFGVVL EL T
Sbjct: 204 DNIFSRQSDVWSFGVVLYELFT 225
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 97/212 (45%), Gaps = 14/212 (6%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSA-DHPNLVKLI 154
LG+G FGKV+ +K Q AIK L V V E L A +HP L +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ V EY+ G L H+ D + AA GLQ+LH +
Sbjct: 85 CTFQTKENLFFVMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLH---SK 137
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
++YRDLK NILL++ H K++DFG+ K GD + GT Y AP+ + +
Sbjct: 138 GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXFCGTPDYIAPEILLGQKY 195
Query: 275 TFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
D +SFGV+L E++ G+ +D +EL
Sbjct: 196 NHSVDWWSFGVLLYEMLIGQSPF-HGQDEEEL 226
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 105/212 (49%), Gaps = 10/212 (4%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G FG+V+ G +V AIK L G F E + H LV+L +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKV-AIKTLKP-GTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
E + +V EYM GSL L D + R L + +AA + G+ Y+ + I+
Sbjct: 75 E-EPIYIVTEYMNKGSLLDFLKD--GEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIH 128
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL+ +NIL+ G K++DFGLA++ + T + AP+ A+ G+ T KS
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEXT-ARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 279 DIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
D++SFG++L EL+T GR +R+ L V
Sbjct: 188 DVWSFGILLTELVTKGRVPYPGMNNREVLEQV 219
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 15/231 (6%)
Query: 74 SGKSAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRG 128
S +A + DE A LG+G FG VY+G + + E VAIK ++
Sbjct: 2 SFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 61
Query: 129 VQGVR-EFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR 187
R EF E + + ++V+L+G ++G L++ E M G L +L LRP+
Sbjct: 62 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 121
Query: 188 ------PLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGL 241
P + +++A + G+ YL+ ++RDL N ++ E + K+ DFG+
Sbjct: 122 NNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGM 178
Query: 242 AKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ D + + + +P+ G T SD++SFGVVL E+ T
Sbjct: 179 TRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
+G+G FG+V+KG + ++VVAIK +D + + E+ L D P + K G
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 158 AEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVI 217
+ + ++ EY+ GS L L P PLD I +GL YLH + K I
Sbjct: 90 LKDTKLWIIMEYLGGGSA---LDLLEPG--PLDETQIATILREILKGLDYLHSEKK---I 141
Query: 218 YRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFK 277
+RD+K +N+LL E KL+DFG+A G D +GT + AP+ K
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 199
Query: 278 SDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
+DI+S G+ +EL G + K L L+
Sbjct: 200 ADIWSLGITAIELARGEPPHSELHPMKVLFLI 231
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 114/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L++ + MP G L ++ + + + L+W ++ ++
Sbjct: 77 NPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AK 129
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 130 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
+G+G FG+V+KG + ++VVAIK +D + + E+ L D P + K G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 158 AEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVI 217
+ + ++ EY+ GS L L P PLD I +GL YLH + K I
Sbjct: 75 LKDTKLWIIMEYLGGGS---ALDLLEPG--PLDETQIATILREILKGLDYLHSEKK---I 126
Query: 218 YRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFK 277
+RD+K +N+LL E KL+DFG+A G D +GT + AP+ K
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 184
Query: 278 SDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
+DI+S G+ +EL G + K L L+
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 114/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L++ + MP G L ++ + + + L+W ++ ++
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 114/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L++ + MP G L ++ + + + L+W ++ ++
Sbjct: 77 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 129
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 130 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 77 SAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQG 131
+A F DE A LG+G FG VY+G + + E VAIK ++
Sbjct: 2 AADVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 61
Query: 132 VR-EFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR--- 187
R EF E + + ++V+L+G ++G L++ E M G L +L LRP+
Sbjct: 62 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 188 ---PLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKM 244
P + +++A + G+ YL+ ++RDL N ++ E + K+ DFG+ +
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 178
Query: 245 GPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
D + + + +P+ G T SD++SFGVVL E+ T
Sbjct: 179 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 114/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L++ + MP G L ++ + + + L+W ++ ++
Sbjct: 80 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 132
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 133 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 189
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
+G+G FG+V+KG + ++VVAIK +D + + E+ L D P + K G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 158 AEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVI 217
+ + ++ EY+ GS L L P PLD I +GL YLH + K I
Sbjct: 75 LKDTKLWIIMEYLGGGS---ALDLLEPG--PLDETQIATILREILKGLDYLHSEKK---I 126
Query: 218 YRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFK 277
+RD+K +N+LL E KL+DFG+A G D +GT + AP+ K
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 184
Query: 278 SDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
+DI+S G+ +EL G + K L L+
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L+ + MP G L ++ + + + L+W ++ ++
Sbjct: 86 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 138
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 139 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 195
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L+ + MP G L ++ + + + L+W ++ ++
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
+G+G FG+V+KG + ++VVAIK +D + + E+ L D P + K G
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 158 AEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVI 217
+ + ++ EY+ GS L L P PLD I +GL YLH + K I
Sbjct: 95 LKDTKLWIIMEYLGGGS---ALDLLEPG--PLDETQIATILREILKGLDYLHSEKK---I 146
Query: 218 YRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFK 277
+RD+K +N+LL E KL+DFG+A G D +GT + AP+ K
Sbjct: 147 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 204
Query: 278 SDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
+DI+S G+ +EL G + K L L+
Sbjct: 205 ADIWSLGITAIELARGEPPHSELHPMKVLFLI 236
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 114/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L++ + MP G L ++ + + + L+W ++ ++
Sbjct: 76 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 114/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L++ + MP G L ++ + + + L+W ++ ++
Sbjct: 79 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L+ + MP G L ++ + + + L+W ++ ++
Sbjct: 101 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 153
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 154 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 210
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 15/221 (6%)
Query: 84 DELAAATGNFRSDCCLGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQGVR-EFSA 137
DE A LG+G FG VY+G + + E VAIK ++ R EF
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 138 EVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR------PLDW 191
E + + ++V+L+G ++G L++ E M G L +L LRP+ P
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 192 NTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT 251
+ +++A + G+ YL+ ++RDL N ++ E + K+ DFG+ + D
Sbjct: 123 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 252 HVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ + + +P+ G T SD++SFGVVL E+ T
Sbjct: 180 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L+ + MP G L ++ + + + L+W ++ ++
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L+ + MP G L ++ + + + L+W ++ ++
Sbjct: 78 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L+ + MP G L ++ + + + L+W ++ ++
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L+ + MP G L ++ + + + L+W ++ ++
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L+ + MP G L ++ + + + L+W ++ ++
Sbjct: 82 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 134
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 135 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 191
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L+ + MP G L ++ + + + L+W ++ ++
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L+ + MP G L ++ + + + L+W ++ ++
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L+ + MP G L ++ + + + L+W ++ ++
Sbjct: 70 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 122
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 123 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 179
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L+ + MP G L ++ + + + L+W ++ ++
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLE---KIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADH 147
N D +G G FG+V G L+ K E VAIK L + R +F E +G DH
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 148 PNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGL 205
PN+++L G + ++V EYM GSLD L HD + L + + G + G+
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGM 160
Query: 206 QYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYC 264
+YL + ++RDL NIL+ K+SDFGLA++ + +TR +
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWT 217
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELIT 292
+P+ + T SD++S+G+VL E+++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL- 153
LG+G FG V Y + +VA+KQL H G R+F E+ L + +VK
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 154 -IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
+ Y + LV EY+P G L L R LD + + ++ +G++YL +
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGSRR 131
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--TYGYCAPDYAM 270
++RDL NIL+E H K++DFGLAK+ P DK R G + AP+
Sbjct: 132 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDXXVVREPGQSPIFWYAPESLS 187
Query: 271 TGQLTFKSDIYSFGVVLLELIT 292
+ +SD++SFGVVL EL T
Sbjct: 188 DNIFSRQSDVWSFGVVLYELFT 209
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 15/231 (6%)
Query: 74 SGKSAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRG 128
S +A + DE A LG+G FG VY+G + + E VAIK ++
Sbjct: 2 SFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 61
Query: 129 VQGVR-EFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR 187
R EF E + + ++V+L+G ++G L++ E M G L +L LRP+
Sbjct: 62 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 121
Query: 188 ------PLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGL 241
P + +++A + G+ YL+ ++RDL N ++ E + K+ DFG+
Sbjct: 122 NNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGM 178
Query: 242 AKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ D + + + +P+ G T SD++SFGVVL E+ T
Sbjct: 179 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLE---KIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADH 147
N D +G G FG+V G L+ K E VAIK L + R +F E +G DH
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 148 PNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGL 205
PN+++L G + ++V EYM GSLD L HD + L + + G + G+
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGM 131
Query: 206 QYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYC 264
+YL + ++RDL NIL+ K+SDFGL+++ + +TR +
Sbjct: 132 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELIT 292
+P+ + T SD++S+G+VL E+++
Sbjct: 189 SPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 99 LGE-GGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
+GE G FGKVYK ++ + A K +D + + + ++ E+ L S DHPN+VKL+
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 158 AEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVI 217
+ ++ E+ G++D + +L RPL + + L YLH+ +I
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLHD---NKII 130
Query: 218 YRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTR--VMGTYGYCAPDYAMTGQ-- 273
+RDLK NIL KL+DFG++ +T + R +GT + AP+ M
Sbjct: 131 HRDLKAGNILFTLDGDIKLADFGVSA---KNTRTXIQRRDSFIGTPYWMAPEVVMCETSK 187
Query: 274 ---LTFKSDIYSFGVVLLEL 290
+K+D++S G+ L+E+
Sbjct: 188 DRPYDYKADVWSLGITLIEM 207
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 112/216 (51%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L+ + MP G L ++ + + + L+W ++ +
Sbjct: 73 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AE 125
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 126 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 182
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLE---KIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADH 147
N D +G G FG+V G L+ K E VAIK L + R +F E +G DH
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 148 PNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGL 205
PN+++L G + ++V EYM GSLD L HD + L + + G + G+
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGM 160
Query: 206 QYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYC 264
+YL + ++RDL NIL+ K+SDFGL+++ + +TR +
Sbjct: 161 KYLSD---MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELIT 292
+P+ + T SD++S+G+VL E+++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 77 SAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQG 131
+A + DE A LG+G FG VY+G + + E VAIK ++
Sbjct: 4 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 63
Query: 132 VR-EFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR--- 187
R EF E + + ++V+L+G ++G L++ E M G L +L LRP+
Sbjct: 64 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 188 ---PLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKM 244
P + +++A + G+ YL+ ++RDL N ++ E + K+ DFG+ +
Sbjct: 124 VLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 245 GPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
D + + + +P+ G T SD++SFGVVL E+ T
Sbjct: 181 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 77 SAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQG 131
+A + DE A LG+G FG VY+G + + E VAIK ++
Sbjct: 4 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 63
Query: 132 VR-EFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR--- 187
R EF E + + ++V+L+G ++G L++ E M G L +L LRP+
Sbjct: 64 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 188 ---PLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKM 244
P + +++A + G+ YL+ ++RDL N ++ E + K+ DFG+ +
Sbjct: 124 VLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 245 GPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
D + + + +P+ G T SD++SFGVVL E+ T
Sbjct: 181 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLE---KIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADH 147
N D +G G FG+V G L+ K E VAIK L + R +F E +G DH
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 148 PNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGL 205
PN+++L G + ++V EYM GSLD L HD + L + + G + G+
Sbjct: 94 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGM 148
Query: 206 QYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYC 264
+YL + ++RDL NIL+ K+SDFGL+++ + +TR +
Sbjct: 149 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 205
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELIT 292
+P+ + T SD++S+G+VL E+++
Sbjct: 206 SPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 77 SAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQG 131
+A + DE A LG+G FG VY+G + + E VAIK ++
Sbjct: 33 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 92
Query: 132 VR-EFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR--- 187
R EF E + + ++V+L+G ++G L++ E M G L +L LRP+
Sbjct: 93 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 152
Query: 188 ---PLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKM 244
P + +++A + G+ YL+ ++RDL N ++ E + K+ DFG+ +
Sbjct: 153 VLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 209
Query: 245 GPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
D + + + +P+ G T SD++SFGVVL E+ T
Sbjct: 210 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 77 SAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQG 131
+A + DE A LG+G FG VY+G + + E VAIK ++
Sbjct: 11 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 70
Query: 132 VR-EFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR--- 187
R EF E + + ++V+L+G ++G L++ E M G L +L LRP+
Sbjct: 71 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 130
Query: 188 ---PLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKM 244
P + +++A + G+ YL+ ++RDL N ++ E + K+ DFG+ +
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 245 GPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
D + + + +P+ G T SD++SFGVVL E+ T
Sbjct: 188 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLE---KIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADH 147
N D +G G FG+V G L+ K E VAIK L + R +F E +G DH
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 148 PNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGL 205
PN+++L G + ++V EYM GSLD L HD + L + + G + G+
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGM 160
Query: 206 QYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYC 264
+YL + ++RDL NIL+ K+SDFGL+++ + +TR +
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELIT 292
+P+ + T SD++S+G+VL E+++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLE---KIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADH 147
N D +G G FG+V G L+ K E VAIK L + R +F E +G DH
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 148 PNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGL 205
PN+++L G + ++V EYM GSLD L HD + L + + G + G+
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGM 160
Query: 206 QYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYC 264
+YL + ++RDL NIL+ K+SDFGL+++ + +TR +
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELIT 292
+P+ + T SD++S+G+VL E+++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLE---KIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADH 147
N D +G G FG+V G L+ K E VAIK L + R +F E +G DH
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 148 PNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGL 205
PN+++L G + ++V EYM GSLD L HD + L + + G + G+
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGM 160
Query: 206 QYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYC 264
+YL + ++RDL NIL+ K+SDFGL+++ + +TR +
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELIT 292
+P+ + T SD++S+G+VL E+++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLE---KIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADH 147
N D +G G FG+V G L+ K E VAIK L + R +F E +G DH
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 103
Query: 148 PNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGL 205
PN+++L G + ++V EYM GSLD L HD + L + + G + G+
Sbjct: 104 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGM 158
Query: 206 QYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYC 264
+YL + ++RDL NIL+ K+SDFGL+++ + +TR +
Sbjct: 159 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 215
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELIT 292
+P+ + T SD++S+G+VL E+++
Sbjct: 216 SPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLE---KIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADH 147
N D +G G FG+V G L+ K E VAIK L + R +F E +G DH
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 148 PNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGL 205
PN+++L G + ++V EYM GSLD L HD + L + + G + G+
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGM 160
Query: 206 QYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYC 264
+YL + ++RDL NIL+ K+SDFGL+++ + +TR +
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELIT 292
+P+ + T SD++S+G+VL E+++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 15/221 (6%)
Query: 84 DELAAATGNFRSDCCLGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQGVR-EFSA 137
DE A LG+G FG VY+G + + E VAIK ++ R EF
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 138 EVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR------PLDW 191
E + + ++V+L+G ++G L++ E M G L +L LRP+ P
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 192 NTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT 251
+ +++A + G+ YL+ ++RDL N ++ E + K+ DFG+ + D
Sbjct: 125 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 252 HVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ + + +P+ G T SD++SFGVVL E+ T
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 22/229 (9%)
Query: 80 PFTFDELAAATGNFRSDC---------CLGEGGFGKVYKGCLE---KIEQVVAIKQLDHR 127
PFTF++ A F + +G G FG+V G L+ K E VAIK L
Sbjct: 13 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG 72
Query: 128 GVQGVR-EFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT 186
+ R +F +E +G DHPN++ L G + +++ E+M GSLD LR +
Sbjct: 73 YTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSF---LRQND 129
Query: 187 RPLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGP 246
+ + G + G++YL + ++RDL NIL+ K+SDFGL++
Sbjct: 130 GQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 186
Query: 247 SGDKTHVSTRVMG---TYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
T +G + AP+ + T SD++S+G+V+ E+++
Sbjct: 187 DDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ L G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L++ + MP G L ++ + + + L+W ++ ++
Sbjct: 83 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLE---KIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADH 147
N D +G G FG+V G L+ K E VAIK L + R +F E +G DH
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 148 PNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGL 205
PN+++L G + ++V EYM GSLD L HD + L + + G + G+
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGM 160
Query: 206 QYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYC 264
+YL + ++RDL NIL+ K+SDFGL ++ + +TR +
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELIT 292
+P+ + T SD++S+G+VL E+++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L++ + MP G L ++ + + + L+W ++ ++
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFG AK+ + +K + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 31/213 (14%)
Query: 92 NFRSDCCLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVM 140
+F+ LG G FG+V Y + K E VV +KQ++H + E +
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHT--------NDERL 58
Query: 141 TLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG 200
L HP ++++ G + Q ++ +Y+ G L L + P+ AA
Sbjct: 59 MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPV----AKFYAAE 114
Query: 201 ASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT 260
L+YLH + +IYRDLK NILL++ H K++DFG AK P V+ + GT
Sbjct: 115 VCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGT 166
Query: 261 YGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y AP+ T D +SFG+++ E++ G
Sbjct: 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L++ + MP G L ++ + + + L+W ++ ++
Sbjct: 80 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 132
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFG AK+ + +K + + +
Sbjct: 133 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 189
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L++ + MP G L ++ + + + L+W ++ ++
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFG AK+ + +K + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 112/216 (51%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ L G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L+ + MP G L ++ + + + L+W ++ ++
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 112/216 (51%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ L G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L+ + MP G L ++ + + + L+W ++ ++
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 64
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 120
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS +T +S GT Y
Sbjct: 121 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----GTLDY 173
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 112/216 (51%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAI +L + + +E E + S D
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L+ + MP G L ++ + + + L+W ++ ++
Sbjct: 110 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 162
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFGLAK+ + +K + + +
Sbjct: 163 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 219
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 220 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 112/216 (51%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L+ + MP G L ++ + + + L+W ++ ++
Sbjct: 78 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFG AK+ + +K + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 112/216 (51%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L+ + MP G L ++ + + + L+W ++ ++
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFG AK+ + +K + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 185
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 112/216 (51%), Gaps = 19/216 (8%)
Query: 92 NFRSDCCLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSAD 146
F+ LG G FG VYKG EK++ VAIK+L + + +E E + S D
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP---LDWNTRMKIAAGASR 203
+P++ +L+G C +L+ + MP G L ++ + + + L+W ++ ++
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+ YL ++ +++RDL N+L++ H K++DFG AK+ + +K + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 192
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELIT-GRKAID 298
A + + T +SD++S+GV + EL+T G K D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 9/221 (4%)
Query: 72 NNSGKSAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG 131
+ + K KP+ DE + LG G FG+V+ G +V A+K L +G
Sbjct: 2 SQTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMS 59
Query: 132 VREFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDW 191
F AE + H LV+L + + ++ EYM GSL L P L
Sbjct: 60 PDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTI 116
Query: 192 NTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT 251
N + +AA + G+ ++ E+ I+RDL+ +NIL+ + K++DFGLA++ + T
Sbjct: 117 NKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 173
Query: 252 HVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ G T KSD++SFG++L E++T
Sbjct: 174 -AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+ R + LG+G FG+V+ G +V AIK L G F E + H LV
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT-RPLDWNTRMKIAAGASRGLQYLHE 210
+L +E + +V EYM GSL L L+ +T + L + +AA + G+ Y+
Sbjct: 243 QLYAVVSE-EPIYIVTEYMSKGSL---LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE- 297
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+ ++RDL+ +NIL+ E K++DFGLA++ + T + AP+ A+
Sbjct: 298 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAAL 354
Query: 271 TGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
G+ T KSD++SFG++L EL T GR +R+ L+ V
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+ R + LG+G FG+V+ G +V AIK L G F E + H LV
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT-RPLDWNTRMKIAAGASRGLQYLHE 210
+L +E + +V EYM GSL L L+ +T + L + +AA + G+ Y+
Sbjct: 243 QLYAVVSE-EPIYIVTEYMSKGSL---LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE- 297
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+ ++RDL+ +NIL+ E K++DFGLA++ + T + AP+ A+
Sbjct: 298 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAAL 354
Query: 271 TGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
G+ T KSD++SFG++L EL T GR +R+ L+ V
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 80
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 136
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS + T + GT Y
Sbjct: 137 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 189
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 11/196 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
+G+G FG+V+KG + +QVVAIK +D + + E+ L D + K G
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 158 AEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVI 217
+G + ++ EY+ GS L LR P D + +GL YLH + K I
Sbjct: 91 LKGSKLWIIMEYLGGGS---ALDLLR--AGPFDEFQIATMLKEILKGLDYLHSEKK---I 142
Query: 218 YRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFK 277
+RD+K +N+LL E KL+DFG+A G D +GT + AP+ K
Sbjct: 143 HRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSK 200
Query: 278 SDIYSFGVVLLELITG 293
+DI+S G+ +EL G
Sbjct: 201 ADIWSLGITAIELAKG 216
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 77 SAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQG 131
+A + DE A LG+G FG VY+G + + E VAIK ++
Sbjct: 1 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 60
Query: 132 VR-EFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT---- 186
R EF E + + ++V+L+G ++G L++ E M G L +L LRP
Sbjct: 61 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 120
Query: 187 --RPLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKM 244
P + +++A + G+ YL+ ++RDL N ++ E + K+ DFG+ +
Sbjct: 121 VLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 177
Query: 245 GPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
D + + + +P+ G T SD++SFGVVL E+ T
Sbjct: 178 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 9/220 (4%)
Query: 73 NSGKSAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGV 132
+ K KP+ DE + LG G FG+V+ G +V A+K L +G
Sbjct: 1 QTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSP 58
Query: 133 REFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWN 192
F AE + H LV+L + + ++ EYM GSL L P L N
Sbjct: 59 DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTIN 115
Query: 193 TRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTH 252
+ +AA + G+ ++ E+ I+RDL+ +NIL+ + K++DFGLA++ + T
Sbjct: 116 KLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT- 171
Query: 253 VSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ G T KSD++SFG++L E++T
Sbjct: 172 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 89
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 145
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS + T + GT Y
Sbjct: 146 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 198
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 15/224 (6%)
Query: 81 FTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQGVR-E 134
+ DE A LG+G FG VY+G + + E VAIK ++ R E
Sbjct: 2 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 61
Query: 135 FSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR------P 188
F E + + ++V+L+G ++G L++ E M G L +L LRP+ P
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 121
Query: 189 LDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSG 248
+ +++A + G+ YL+ ++RDL N + E + K+ DFG+ +
Sbjct: 122 PSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYET 178
Query: 249 DKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
D + + + +P+ G T SD++SFGVVL E+ T
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+ R + LG+G FG+V+ G +V AIK L G F E + H LV
Sbjct: 268 SLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 325
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT-RPLDWNTRMKIAAGASRGLQYLHE 210
+L +E + +V EYM GSL L L+ +T + L + +AA + G+ Y+
Sbjct: 326 QLYAVVSE-EPIYIVTEYMSKGSL---LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE- 380
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+ ++RDL+ +NIL+ E K++DFGLA++ + T + AP+ A+
Sbjct: 381 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAAL 437
Query: 271 TGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
G+ T KSD++SFG++L EL T GR +R+ L+ V
Sbjct: 438 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 477
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADHPNLVK 152
LG+G FG VY+G I E VA+K ++ R EF E + ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR------PLDWNTRMKIAAGASRGLQ 206
L+G ++G L+V E M G L +L LRP+ P +++AA + G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 207 YLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
YL+ + ++RDL N ++ + K+ DFG+ + D + + + AP
Sbjct: 142 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ G T SD++SFGVVL E+ +
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 77 SAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQG 131
+A + DE A LG+G FG VY+G + + E VAIK ++
Sbjct: 11 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 70
Query: 132 VR-EFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT---- 186
R EF E + + ++V+L+G ++G L++ E M G L +L LRP
Sbjct: 71 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 130
Query: 187 --RPLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKM 244
P + +++A + G+ YL+ ++RDL N ++ E + K+ DFG+ +
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 245 GPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
D + + + +P+ G T SD++SFGVVL E+ T
Sbjct: 188 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+ R + LG+G FG+V+ G +V AIK L G F E + H LV
Sbjct: 9 SLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 66
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT-RPLDWNTRMKIAAGASRGLQYLHE 210
+L +E + +V EYM GSL L L+ +T + L + +AA + G+ Y+
Sbjct: 67 QLYAVVSE-EPIXIVTEYMSKGSL---LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE- 121
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+ ++RDL+ +NIL+ E K++DFGLA++ + T + AP+ A+
Sbjct: 122 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXT-ARQGAKFPIKWTAPEAAL 178
Query: 271 TGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
G+ T KSD++SFG++L EL T GR +R+ L+ V
Sbjct: 179 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 218
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 9/220 (4%)
Query: 73 NSGKSAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGV 132
+ K KP+ DE + LG G FG+V+ G +V A+K L +G
Sbjct: 1 QTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSP 58
Query: 133 REFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWN 192
F AE + H LV+L + + ++ EYM GSL L P L N
Sbjct: 59 DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTIN 115
Query: 193 TRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTH 252
+ +AA + G+ ++ E+ I+RDL+ +NIL+ + K++DFGLA++ + T
Sbjct: 116 KLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT- 171
Query: 253 VSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ G T KSD++SFG++L E++T
Sbjct: 172 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 19/219 (8%)
Query: 74 SGKSAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVR 133
S K KP+ D + + + LG G FG+V+ K +V A+K + G V
Sbjct: 165 SSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKV-AVKTMKP-GSMSVE 222
Query: 134 EFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNT 193
F AE + + H LVKL + + ++ E+M GSL L +PL
Sbjct: 223 AFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--K 279
Query: 194 RMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV 253
+ +A + G+ ++ ++ I+RDL+ +NIL+ K++DFGLA++G
Sbjct: 280 LIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVG-------- 328
Query: 254 STRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ G T KSD++SFG++L+E++T
Sbjct: 329 ---AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 9/219 (4%)
Query: 74 SGKSAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVR 133
+ K KP+ DE + LG G FG+V+ G +V A+K L +G
Sbjct: 1 TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPD 58
Query: 134 EFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNT 193
F AE + H LV+L + + ++ EYM GSL L P L N
Sbjct: 59 AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINK 115
Query: 194 RMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV 253
+ +AA + G+ ++ E+ I+RDL+ +NIL+ + K++DFGLA++ + T
Sbjct: 116 LLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-A 171
Query: 254 STRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ G T KSD++SFG++L E++T
Sbjct: 172 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADHPNLVK 152
LG+G FG VY+G I E VA+K ++ R EF E + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR------PLDWNTRMKIAAGASRGLQ 206
L+G ++G L+V E M G L +L LRP+ P +++AA + G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 207 YLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
YL+ + ++RDL N ++ + K+ DFG+ + D + + + AP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ G T SD++SFGVVL E+ +
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADHPNLVK 152
LG+G FG VY+G I E VA+K ++ R EF E + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR------PLDWNTRMKIAAGASRGLQ 206
L+G ++G L+V E M G L +L LRP+ P +++AA + G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 207 YLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
YL+ + ++RDL N ++ + K+ DFG+ + D + + + AP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ G T SD++SFGVVL E+ +
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 9/220 (4%)
Query: 73 NSGKSAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGV 132
+ K KP+ DE + LG G FG+V+ G +V A+K L +G
Sbjct: 5 QTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLK-QGSMSP 62
Query: 133 REFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWN 192
F AE + H LV+L + + ++ EYM GSL L P L N
Sbjct: 63 DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTIN 119
Query: 193 TRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTH 252
+ +AA + G+ ++ E+ I+RDL+ +NIL+ + K++DFGLA++ + T
Sbjct: 120 KLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT- 175
Query: 253 VSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ G T KSD++SFG++L E++T
Sbjct: 176 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 24/229 (10%)
Query: 80 PFTFDELAAATGNFRSDC---------CLGEGGFGKVYKGCLE---KIEQVVAIKQLDHR 127
PFTF++ A F + +G G FG+V G L+ K E VAIK L
Sbjct: 9 PFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAG 68
Query: 128 GV-QGVREFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDLRP 184
+ R+F +E +G DHPN++ L G + +++ EYM GSLD L +D R
Sbjct: 69 YTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF 128
Query: 185 DTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKM 244
L + + G G++YL + ++RDL NIL+ K+SDFG++++
Sbjct: 129 TVIQL-----VGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGMSRV 180
Query: 245 GPSGDKTHVSTRVMGT-YGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ +TR + AP+ + T SD++S+G+V+ E+++
Sbjct: 181 LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 119
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS +T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC----GTLDY 172
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 11/222 (4%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHP 148
+F+ LG+G F VY+ VAIK +D + + V+ EV HP
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 149 NLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYL 208
++++L Y + + LV E G ++++L + +P N G+ YL
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQIITGMLYL 128
Query: 209 HEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY 268
H +++RDL SN+LL + K++DFGLA + H + + GT Y +P+
Sbjct: 129 HSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEI 183
Query: 269 AMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVA 310
A +SD++S G + L+ GR D + LN V
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 98 CLGEGGFGKVYKGCLE----KIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADHPNLVK 152
+G G FG+VYKG L+ K E VAIK L + R +F E +G H N+++
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
L G ++ +++ EYM G+LDK L + + L ++ G + G++YL
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKYLA--- 164
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKM---GPSGDKTHVSTRVMGTYGYCAPDYA 269
++RDL NIL+ K+SDFGL+++ P T ++ + AP+
Sbjct: 165 NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI--PIRWTAPEAI 222
Query: 270 MTGQLTFKSDIYSFGVVLLELIT 292
+ T SD++SFG+V+ E++T
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMT 245
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+ R + LG+G FG+V+ G +V AIK L G F E + H LV
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT-RPLDWNTRMKIAAGASRGLQYLHE 210
+L +E + +V EYM GSL L L+ +T + L + +AA + G+ Y+
Sbjct: 243 QLYAVVSE-EPIYIVGEYMSKGSL---LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE- 297
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+ ++RDL+ +NIL+ E K++DFGLA++ + T + AP+ A+
Sbjct: 298 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAAL 354
Query: 271 TGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
G+ T KSD++SFG++L EL T GR +R+ L+ V
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 122
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS + T + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 175
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 124
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS + T + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 177
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 124
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS + T + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 177
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+ R + LG+G FG+V+ G +V AIK L G F E + H LV
Sbjct: 12 SLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 69
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT-RPLDWNTRMKIAAGASRGLQYLHE 210
+L +E + +V EYM GSL L L+ +T + L + +AA + G+ Y+
Sbjct: 70 QLYAVVSE-EPIYIVTEYMSKGSL---LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE- 124
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+ ++RDL+ +NIL+ E K++DFGLA++ + T + AP+ A+
Sbjct: 125 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAAL 181
Query: 271 TGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
G+ T KSD++SFG++L EL T GR +R+ L+ V
Sbjct: 182 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 221
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 64
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 120
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS +T + GT Y
Sbjct: 121 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDY 173
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 119
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS +T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDY 172
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 111/242 (45%), Gaps = 34/242 (14%)
Query: 73 NSGKSAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLE-----KIEQVVAIKQLDHR 127
N K AK E++ + F + LGE FGKVYKG L + Q VAIK L +
Sbjct: 13 NQHKQAK---LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK 67
Query: 128 GVQGVRE-FSAEVMTLGSADHPNLVKLIG-------------YCAEGDQRLLVYEYMP-- 171
+RE F E M HPN+V L+G YC+ GD + P
Sbjct: 68 AEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHS 127
Query: 172 -LGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEE 230
+GS D D R L+ + + A + G++YL V+++DL N+L+ +
Sbjct: 128 DVGSTD----DDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYD 180
Query: 231 GYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLEL 290
+ K+SD GL + + D + + + AP+ M G+ + SDI+S+GVVL E+
Sbjct: 181 KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 240
Query: 291 IT 292
+
Sbjct: 241 FS 242
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 119
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS + T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 172
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 9/214 (4%)
Query: 79 KPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAE 138
KP+ DE + LG G FG+V+ G +V A+K L +G F AE
Sbjct: 2 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAE 59
Query: 139 VMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIA 198
+ H LV+L + + ++ EYM GSL L P L N + +A
Sbjct: 60 ANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMA 116
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM 258
A + G+ ++ E+ I+RDL+ +NIL+ + K++DFGLA++ + T
Sbjct: 117 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAK 172
Query: 259 GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ G T KSD++SFG++L E++T
Sbjct: 173 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLE---KIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADH 147
N D +G G FG+V G L+ K E VAIK L + R +F E +G DH
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 148 PNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGL 205
PN+++L G + ++V E M GSLD L HD + L + + G + G+
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGM 160
Query: 206 QYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYC 264
+YL + ++RDL NIL+ K+SDFGL+++ + +TR +
Sbjct: 161 KYLSD---MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELIT 292
+P+ + T SD++S+G+VL E+++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLE---KIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADH 147
N D +G G FG+V G L+ K E VAIK L + R +F E +G DH
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 148 PNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGL 205
PN+++L G + ++V E M GSLD L HD + L + + G + G+
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGM 131
Query: 206 QYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYC 264
+YL + ++RDL NIL+ K+SDFGL+++ + +TR +
Sbjct: 132 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELIT 292
+P+ + T SD++S+G+VL E+++
Sbjct: 189 SPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 9/214 (4%)
Query: 79 KPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAE 138
KP+ DE + LG G FG+V+ G +V A+K L +G F AE
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAE 58
Query: 139 VMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIA 198
+ H LV+L + + ++ EYM GSL L P L N + +A
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMA 115
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM 258
A + G+ ++ E+ I+RDL+ +NIL+ + K++DFGLA++ + T
Sbjct: 116 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAK 171
Query: 259 GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ G T KSD++SFG++L E++T
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 9/214 (4%)
Query: 79 KPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAE 138
KP+ DE + LG G FG+V+ G +V A+K L +G F AE
Sbjct: 3 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAE 60
Query: 139 VMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIA 198
+ H LV+L + + ++ EYM GSL L P L N + +A
Sbjct: 61 ANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMA 117
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM 258
A + G+ ++ E+ I+RDL+ +NIL+ + K++DFGLA++ + T
Sbjct: 118 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAK 173
Query: 259 GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ G T KSD++SFG++L E++T
Sbjct: 174 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 124
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS +T + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDY 177
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 119
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS +T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDY 172
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 9/214 (4%)
Query: 79 KPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAE 138
KP+ DE + LG G FG+V+ G +V A+K L +G F AE
Sbjct: 10 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAE 67
Query: 139 VMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIA 198
+ H LV+L + + ++ EYM GSL L P L N + +A
Sbjct: 68 ANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMA 124
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM 258
A + G+ ++ E+ I+RDL+ +NIL+ + K++DFGLA++ + T
Sbjct: 125 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAK 180
Query: 259 GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ G T KSD++SFG++L E++T
Sbjct: 181 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 9/219 (4%)
Query: 74 SGKSAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVR 133
S K KP+ D + + + LG G FG+V+ K +V A+K + G V
Sbjct: 171 SSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKV-AVKTMKP-GSMSVE 228
Query: 134 EFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNT 193
F AE + + H LVKL + + ++ E+M GSL L +PL
Sbjct: 229 AFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--K 285
Query: 194 RMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV 253
+ +A + G+ ++ ++ I+RDL+ +NIL+ K++DFGLA++ + T
Sbjct: 286 LIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT-A 341
Query: 254 STRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ G T KSD++SFG++L+E++T
Sbjct: 342 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 9/214 (4%)
Query: 79 KPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAE 138
KP+ DE + LG G FG+V+ G +V A+K L +G F AE
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAE 58
Query: 139 VMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIA 198
+ H LV+L + + ++ EYM GSL L P L N + +A
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMA 115
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM 258
A + G+ ++ E+ I+RDL+ +NIL+ + K++DFGLA++ + T
Sbjct: 116 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAK 171
Query: 259 GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ G T KSD++SFG++L E++T
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 122
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS + T + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 175
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 9/214 (4%)
Query: 79 KPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAE 138
KP+ DE + LG G FG+V+ G +V A+K L +G F AE
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAE 58
Query: 139 VMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIA 198
+ H LV+L + + ++ EYM GSL L P L N + +A
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMA 115
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM 258
A + G+ ++ E+ I+RDL+ +NIL+ + K++DFGLA++ + T
Sbjct: 116 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAK 171
Query: 259 GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ G T KSD++SFG++L E++T
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 119
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS +T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC----GTLDY 172
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLE---KIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADH 147
N D +G G FG+V G L+ K E VAIK L + R +F E +G DH
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 148 PNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGL 205
PN+++L G + ++V E M GSLD L HD + L + + G + G+
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGM 160
Query: 206 QYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYC 264
+YL + ++RDL NIL+ K+SDFGL+++ + +TR +
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELIT 292
+P+ + T SD++S+G+VL E+++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 18/204 (8%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKL 153
LGEG FGKV Y + + VA+K L G + + E+ L + H N+VK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 154 IGYCAE--GDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
G C E G+ L+ E++P GSL ++L + ++ ++K A +G+ YL +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPK---NKNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 212 LKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST---RVMGTYGYCAPDY 268
++RDL N+L+E + K+ DFGL K DK + R + Y AP+
Sbjct: 146 ---QYVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEXXTVKDDRDSPVFWY-APEC 200
Query: 269 AMTGQLTFKSDIYSFGVVLLELIT 292
M + SD++SFGV L EL+T
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLT 224
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 67
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 123
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS + T + GT Y
Sbjct: 124 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 176
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 62
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 118
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS + T + GT Y
Sbjct: 119 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 171
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 18/204 (8%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSADHPNLVKL 153
LGEG FGKV Y + + VA+K L G + + E+ L + H N+VK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 154 IGYCAE--GDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
G C E G+ L+ E++P GSL ++L + ++ ++K A +G+ YL +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPK---NKNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 212 LKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST---RVMGTYGYCAPDY 268
++RDL N+L+E + K+ DFGL K DK + R + Y AP+
Sbjct: 134 ---QYVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEXXTVKDDRDSPVFWY-APEC 188
Query: 269 AMTGQLTFKSDIYSFGVVLLELIT 292
M + SD++SFGV L EL+T
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADHPNLVK 152
LG+G FG VY+G I E VA+K ++ R EF E + ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR------PLDWNTRMKIAAGASRGLQ 206
L+G ++G L+V E M G L +L LRP+ P +++AA + G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 207 YLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
YL+ + ++RDL N ++ + K+ DFG+ + D + + + AP
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ G T SD++SFGVVL E+ +
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 12/220 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+ R + LG+G FG+V+ G +V AIK L G F E + H LV
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT-RPLDWNTRMKIAAGASRGLQYLHE 210
+L +E + +V EYM GSL L L+ + + L + +AA + G+ Y+
Sbjct: 77 QLYAVVSE-EPIYIVIEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE- 131
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+ ++RDL+ +NIL+ E K++DFGLA++ + T + AP+ A+
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXT-ARQGAKFPIKWTAPEAAL 188
Query: 271 TGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
G+ T KSD++SFG++L EL T GR +R+ L+ V
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 99 LGEGGFGKVYKGCLE-----KIEQVVAIKQLDHRGVQGVRE-FSAEVMTLGSADHPNLVK 152
LGE FGKVYKG L + Q VAIK L + +RE F E M HPN+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 153 LIG-------------YCAEGDQRLLVYEYMP---LGSLDKHLHDLRPDTRPLDWNTRMK 196
L+G YC+ GD + P +GS D D R L+ +
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD----DDRTVKSALEPPDFVH 132
Query: 197 IAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTR 256
+ A + G++YL V+++DL N+L+ + + K+SD GL + + D +
Sbjct: 133 LVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 257 VMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ + AP+ M G+ + SDI+S+GVVL E+ +
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+ R + LG+G FG+V+ G +V AIK L G F E + H LV
Sbjct: 16 SLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT-RPLDWNTRMKIAAGASRGLQYLHE 210
+L +E + +V EYM GSL L L+ +T + L + ++A + G+ Y+
Sbjct: 74 QLYAVVSE-EPIYIVTEYMNKGSL---LDFLKGETGKYLRLPQLVDMSAQIASGMAYVE- 128
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+ ++RDL+ +NIL+ E K++DFGLA++ + T + AP+ A+
Sbjct: 129 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWT-ARQGAKFPIKWTAPEAAL 185
Query: 271 TGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
G+ T KSD++SFG++L EL T GR +R+ L+ V
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 225
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 60
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 116
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS + T + GT Y
Sbjct: 117 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 169
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADHPNLVK 152
LG+G FG VY+G I E VA+K ++ R EF E + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR------PLDWNTRMKIAAGASRGLQ 206
L+G ++G L+V E M G L +L LRP+ P +++AA + G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 207 YLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
YL+ + ++RDL N ++ + K+ DFG+ + D + + + AP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ G T SD++SFGVVL E+ +
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 65
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 121
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K+++FG + PS + T + GT Y
Sbjct: 122 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDY 174
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+ R + LG+G FG+V+ G +V AIK L G F E + H LV
Sbjct: 16 SLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT-RPLDWNTRMKIAAGASRGLQYLHE 210
+L +E + +V EYM GSL L L+ +T + L + ++A + G+ Y+
Sbjct: 74 QLYAVVSE-EPIYIVTEYMNKGSL---LDFLKGETGKYLRLPQLVDMSAQIASGMAYVE- 128
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+ ++RDL+ +NIL+ E K++DFGLA++ + T + AP+ A+
Sbjct: 129 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAAL 185
Query: 271 TGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
G+ T KSD++SFG++L EL T GR +R+ L+ V
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 225
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 106/222 (47%), Gaps = 23/222 (10%)
Query: 99 LGEGGFGKVYKGCLEKIE----QVVAIKQLDHR-GVQGVREFSAEVMTLGSADHPNLVKL 153
LGEG FGKV C + ++VA+K L G Q + E+ L + H +++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 154 IGYCA-EGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
G C +G++ L LV EY+PLGSL +L + + A G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLH-- 134
Query: 212 LKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM----GTYGYCAPD 267
Q I+R+L N+LL+ K+ DFGLAK P G H RV + AP+
Sbjct: 135 -SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG---HEYYRVREDGDSPVFWYAPE 190
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
+ + SD++SFGV L EL+T + Q+ K L L+
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELI 231
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 89
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 145
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS + + GT Y
Sbjct: 146 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDY 198
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 12/220 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+ R + LG+G FG+V+ G +V AIK L G F E + H LV
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT-RPLDWNTRMKIAAGASRGLQYLHE 210
+L +E + +V EYM GSL L L+ + + L + +AA + G+ Y+
Sbjct: 77 QLYAVVSE-EPIYIVIEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE- 131
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+ ++RDL+ +NIL+ E K++DFGLA++ + T + AP+ A+
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAAL 188
Query: 271 TGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
G+ T KSD++SFG++L EL T GR +R+ L+ V
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 106/222 (47%), Gaps = 23/222 (10%)
Query: 99 LGEGGFGKVYKGCLEKIE----QVVAIKQLDHR-GVQGVREFSAEVMTLGSADHPNLVKL 153
LGEG FGKV C + ++VA+K L G Q + E+ L + H +++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 154 IGYCA-EGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
G C +G++ L LV EY+PLGSL +L + + A G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLH-- 134
Query: 212 LKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM----GTYGYCAPD 267
Q I+R+L N+LL+ K+ DFGLAK P G H RV + AP+
Sbjct: 135 -AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG---HEYYRVREDGDSPVFWYAPE 190
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
+ + SD++SFGV L EL+T + Q+ K L L+
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELI 231
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 12/220 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+ R + LG+G FG+V+ G +V AIK L G F E + H LV
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKIRHEKLV 76
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT-RPLDWNTRMKIAAGASRGLQYLHE 210
+L +E + +V EYM GSL L L+ + + L + +AA + G+ Y+
Sbjct: 77 QLYAVVSE-EPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE- 131
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+ ++RDL+ +NIL+ E K++DFGLA++ + T + AP+ A+
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAAL 188
Query: 271 TGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
G+ T KSD++SFG++L EL T GR +R+ L+ V
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 65
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 121
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS + + GT Y
Sbjct: 122 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDY 174
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 12/220 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+ R + LG+G FG+V+ G +V AIK L G F E + H LV
Sbjct: 10 SLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 67
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT-RPLDWNTRMKIAAGASRGLQYLHE 210
+L +E + +V EYM GSL L L+ + + L + +AA + G+ Y+
Sbjct: 68 QLYAVVSE-EPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE- 122
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+ ++RDL+ +NIL+ E K++DFGLA++ + T + AP+ A+
Sbjct: 123 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAAL 179
Query: 271 TGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
G+ T KSD++SFG++L EL T GR +R+ L+ V
Sbjct: 180 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 219
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 102/222 (45%), Gaps = 23/222 (10%)
Query: 99 LGEGGFGKVYKGCLEKIE----QVVAIKQLDH-RGVQGVREFSAEVMTLGSADHPNLVKL 153
LGEG FGKV C + ++VA+K L G Q + E+ L + H +++K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 154 IGYC--AEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
G C A LV EY+PLGSL +L + + A G+ YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLH-- 151
Query: 212 LKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM----GTYGYCAPD 267
Q I+RDL N+LL+ K+ DFGLAK P G H RV + AP+
Sbjct: 152 -AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG---HEXYRVREDGDSPVFWYAPE 207
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
+ + SD++SFGV L EL+T + Q+ K L L+
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELI 248
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 12/220 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+ R + LG+G FG+V+ G +V AIK L G F E + H LV
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT-RPLDWNTRMKIAAGASRGLQYLHE 210
+L +E + +V EYM GSL L L+ + + L + +AA + G+ Y+
Sbjct: 77 QLYAVVSE-EPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE- 131
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+ ++RDL+ +NIL+ E K++DFGLA++ + T + AP+ A+
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAAL 188
Query: 271 TGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
G+ T KSD++SFG++L EL T GR +R+ L+ V
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY P G + K L L D +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL----SKFDEQRTATYITELAN 124
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS + T + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 177
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 98 CLGEGGFGKVYKGCLE---KIEQVVAIKQLDHRGVQ-GVREFSAEVMTLGSADHPNLVKL 153
+G G FG+V +G L+ K E VAIK L + REF +E +G +HPN+++L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
G +++ E+M G+LD LR + + + G + G++YL E
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSF---LRLNDGQFTVIQLVGMLRGIASGMRYLAE--- 136
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG---TYGYCAPDYAM 270
++RDL NIL+ K+SDFGL++ T +G + AP+
Sbjct: 137 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 271 TGQLTFKSDIYSFGVVLLELIT 292
+ T SD +S+G+V+ E+++
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMS 218
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 122
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K+++FG + PS + T + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDY 175
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 26/212 (12%)
Query: 99 LGEGGFGKVYKGCLEK--IEQVVAIKQL-DHRGVQGVREFSAEVMTLGS-ADHPNLVKLI 154
+GEG FG+V K ++K + AIK++ ++ R+F+ E+ L HPN++ L+
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRP-DTRP-----------LDWNTRMKIAAGAS 202
G C L EY P G+L L R +T P L + AA +
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--T 260
RG+ YL ++ I+RDL NIL+ E Y K++DFGL++ G + +V + MG
Sbjct: 153 RGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLP 204
Query: 261 YGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ A + T SD++S+GV+L E+++
Sbjct: 205 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 22/207 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG+G FG+ K + +V+ +K+L + R F EV + +HPN++K IG
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 159 EGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVI 217
+ D+RL + EY+ G+L + + D++ W+ R+ A + G+ YLH +I
Sbjct: 78 K-DKRLNFITEYIKGGTLRGIIKSM--DSQ-YPWSQRVSFAKDIASGMAYLHS---MNII 130
Query: 218 YRDLKCSNILLEEGYHPKLSDFGLAKM------GPSG-------DKTHVSTRVMGTYGYC 264
+RDL N L+ E + ++DFGLA++ P G D+ T V+G +
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT-VVGNPYWM 189
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELI 291
AP+ K D++SFG+VL E+I
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRP--DTRPLDWNTRMKIAAGA 201
HPN+++L GY + + L+ EY PLG++ + L L + R + T +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 120
Query: 202 SRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTY 261
+ L Y H + VI+RD+K N+LL K++DFG + PS + + GT
Sbjct: 121 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTL 173
Query: 262 GYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
Y P+ K D++S GV+ E + G+ +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 12/220 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+ R + LG+G FG+V+ G +V AIK L G F E + H LV
Sbjct: 8 SLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 65
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT-RPLDWNTRMKIAAGASRGLQYLHE 210
+L +E + +V EYM GSL L L+ + + L + +AA + G+ Y+
Sbjct: 66 QLYAVVSE-EPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE- 120
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+ ++RDL+ +NIL+ E K++DFGLA++ + T + AP+ A+
Sbjct: 121 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAAL 177
Query: 271 TGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
G+ T KSD++SFG++L EL T GR +R+ L+ V
Sbjct: 178 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 217
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 26/212 (12%)
Query: 99 LGEGGFGKVYKGCLEK--IEQVVAIKQL-DHRGVQGVREFSAEVMTLGS-ADHPNLVKLI 154
+GEG FG+V K ++K + AIK++ ++ R+F+ E+ L HPN++ L+
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRP-DTRP-----------LDWNTRMKIAAGAS 202
G C L EY P G+L L R +T P L + AA +
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--T 260
RG+ YL ++ I+RDL NIL+ E Y K++DFGL++ G + +V + MG
Sbjct: 143 RGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLP 194
Query: 261 YGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ A + T SD++S+GV+L E+++
Sbjct: 195 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 12/220 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+ R + LG+G FG+V+ G +V AIK L G F E + H LV
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT-RPLDWNTRMKIAAGASRGLQYLHE 210
+L +E + +V EYM GSL L L+ + + L + +AA + G+ Y+
Sbjct: 77 QLYAVVSE-EPIYIVCEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE- 131
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+ ++RDL+ +NIL+ E K++DFGLA++ + T + AP+ A+
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAAL 188
Query: 271 TGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
G+ T KSD++SFG++L EL T GR +R+ L+ V
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 64
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 120
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS + + GT Y
Sbjct: 121 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DTLCGTLDY 173
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLGSADHPNLVKL 153
LG+G FG VY + + ++A+K QL+ GV+ + EV HPN+++L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE--HQLRREVEIQSHLRHPNILRL 77
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
GY + + L+ EY PLG++ + L L +R + T I A+ L Y H
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKL---SRFDEQRTATYITELAN-ALSYCH---S 130
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ VI+RD+K N+LL K++DFG + PS + T + GT Y P+
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRM 186
Query: 274 LTFKSDIYSFGVVLLELITG 293
K D++S GV+ E + G
Sbjct: 187 HDEKVDLWSLGVLCYEFLVG 206
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 122
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS + + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDY 175
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 119
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS + + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDY 172
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADHPNLVK 152
LG+G FG VY+G I E VA+K ++ R EF E + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR------PLDWNTRMKIAAGASRGLQ 206
L+G ++G L+V E M G L +L LRP+ P +++AA + G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 207 YLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
YL+ + ++R+L N ++ + K+ DFG+ + D + + + AP
Sbjct: 145 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ G T SD++SFGVVL E+ +
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 119
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS + + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDY 172
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEK-----IEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL 153
LGEG FG V +G L++ ++ V +LD+ + + EF +E + HPN+++L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 154 IGYCAEGDQR-----LLVYEYMPLGSLDKHLHDLRPDTRP--LDWNTRMKIAAGASRGLQ 206
+G C E + +++ +M G L +L R +T P + T +K + G++
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 207 YLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
YL + ++RDL N +L + ++DFGL+K SGD + A
Sbjct: 162 YLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ T KSD+++FGV + E+ T
Sbjct: 219 ESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 17/204 (8%)
Query: 98 CLGEGGFGKVYKGCLE---KIEQVVAIKQLDHRGVQ-GVREFSAEVMTLGSADHPNLVKL 153
+G G FG+V +G L+ K E VAIK L + REF +E +G +HPN+++L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
G +++ E+M G+LD LR + + + G + G++YL E
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSF---LRLNDGQFTVIQLVGMLRGIASGMRYLAE--- 134
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKM--GPSGDKTHVSTRVMG---TYGYCAPDY 268
++RDL NIL+ K+SDFGL++ S D T+ S+ +G + AP+
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSS--LGGKIPIRWTAPEA 192
Query: 269 AMTGQLTFKSDIYSFGVVLLELIT 292
+ T SD +S+G+V+ E+++
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADHPNLVK 152
LG+G FG VY+G I E VA+K ++ R EF E + ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR------PLDWNTRMKIAAGASRGLQ 206
L+G ++G L+V E M G L +L LRP+ P +++AA + G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 207 YLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
YL+ + ++R+L N ++ + K+ DFG+ + D + + + AP
Sbjct: 146 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ G T SD++SFGVVL E+ +
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 20/227 (8%)
Query: 80 PFTFDELAAATGNF----RSDC-----CLGEGGFGKVYKGCLE---KIEQVVAIKQLDHR 127
P T+++ A F + C +G G FG+V G L+ K E VAIK L
Sbjct: 2 PHTYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVG 61
Query: 128 GVQGVR-EFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT 186
+ R +F E +G DHPN++ L G + ++V EYM GSLD L+ +
Sbjct: 62 YTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTF---LKKND 118
Query: 187 RPLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGP 246
+ + G S G++YL + ++RDL NIL+ K+SDFGL+++
Sbjct: 119 GQFTVIQLVGMLRGISAGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 175
Query: 247 SGDKTHVSTRVMGT-YGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ +TR + AP+ + T SD++S+G+V+ E+++
Sbjct: 176 DDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 15/198 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG+G FGKVYK ++ + A K ++ + + + ++ E+ L + DHP +VKL+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDL-RPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVI 217
+ ++ E+ P G++D + +L R T P +I + L+ L+ + +I
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEP-------QIQVVCRQMLEALNFLHSKRII 139
Query: 218 YRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLT-- 275
+RDLK N+L+ +L+DFG++ + S +GT + AP+ M +
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCETMKDT 197
Query: 276 ---FKSDIYSFGVVLLEL 290
+K+DI+S G+ L+E+
Sbjct: 198 PYDYKADIWSLGITLIEM 215
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 9/216 (4%)
Query: 77 SAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFS 136
+ KP+ D + + + LG G FG+V+ K +V A+K + G V F
Sbjct: 1 AQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKV-AVKTMKP-GSMSVEAFL 58
Query: 137 AEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMK 196
AE + + H LVKL + + ++ E+M GSL L +PL +
Sbjct: 59 AEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLID 115
Query: 197 IAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTR 256
+A + G+ ++ ++ I+RDL+ +NIL+ K++DFGLA++ + T
Sbjct: 116 FSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT-AREG 171
Query: 257 VMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ G T KSD++SFG++L+E++T
Sbjct: 172 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 15/198 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG+G FGKVYK ++ + A K ++ + + + ++ E+ L + DHP +VKL+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDL-RPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVI 217
+ ++ E+ P G++D + +L R T P +I + L+ L+ + +I
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEP-------QIQVVCRQMLEALNFLHSKRII 131
Query: 218 YRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLT-- 275
+RDLK N+L+ +L+DFG++ + S +GT + AP+ M +
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCETMKDT 189
Query: 276 ---FKSDIYSFGVVLLEL 290
+K+DI+S G+ L+E+
Sbjct: 190 PYDYKADIWSLGITLIEM 207
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 109/220 (49%), Gaps = 12/220 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+ R + LG+G FG+V+ G +V AIK L G F E + H LV
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT-RPLDWNTRMKIAAGASRGLQYLHE 210
+L +E + +V EYM GSL L L+ + + L + +AA + G+ Y+
Sbjct: 77 QLYAVVSE-EPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE- 131
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+ ++RDL +NIL+ E K++DFGLA++ + T + AP+ A+
Sbjct: 132 --RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAAL 188
Query: 271 TGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
G+ T KSD++SFG++L EL T GR +R+ L+ V
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G FG+V+ G +V A+K L +G F AE + H LV+L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 73
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+ + ++ EYM GSL L P L N + +AA + G+ ++ E+ I+
Sbjct: 74 Q-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 127
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL+ +NIL+ + K++DFGLA++ + T + AP+ G T KS
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 279 DIYSFGVVLLELIT 292
D++SFG++L E++T
Sbjct: 187 DVWSFGILLTEIVT 200
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG +G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 123
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY + + ++A+K QL+ GV+ + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 119
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS + + GT Y
Sbjct: 120 ALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDY 172
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 27/230 (11%)
Query: 98 CLGEGGFGKVYKGCL-----EKIEQVVAIKQLDH-RGVQGVREFSAEVMTLGSADHPNLV 151
+G G FG VY G L +KI A+K L+ + V +F E + + HPN++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIH--CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 152 KLIGYCAEGD-QRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG----ASRGLQ 206
L+G C + L+V YM G DLR R N +K G ++G++
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHG-------DLRNFIRNETHNPTVKDLIGFGLQVAKGMK 148
Query: 207 YLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK--MGPSGDKTHVSTRVMGTYGYC 264
+L + ++RDL N +L+E + K++DFGLA+ + D H T +
Sbjct: 149 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWM 205
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLLR 314
A + T + T KSD++SFGV+L EL+T + D ++ +LL+
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQ 253
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 7/195 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADHPNLVKLIGYC 157
+G G FG+V+ G L +VA+K ++ +F E L HPN+V+LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 158 AEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVI 217
Q+ +Y M L L LR + L T +++ A+ G++YL + I
Sbjct: 182 T---QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 218 YRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFK 277
+RDL N L+ E K+SDFG+++ G + AP+ G+ + +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 278 SDIYSFGVVLLELIT 292
SD++SFG++L E +
Sbjct: 296 SDVWSFGILLWETFS 310
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG +G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 123
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 78 AKPFTFDELAAATGNFRSDC---------CLGEGGFGKVYKGCLEKIEQ---VVAIKQLD 125
A+P T++E A +F + +G G G+V G L Q VAIK L
Sbjct: 27 AEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALK 86
Query: 126 HRGVQ-GVREFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDL 182
+ R+F +E +G DHPN+++L G G ++V EYM GSLD L HD
Sbjct: 87 AGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG 146
Query: 183 RPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLA 242
+ L + + G G++YL + ++RDL N+L++ K+SDFGL+
Sbjct: 147 QFTIMQL-----VGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLS 198
Query: 243 K-MGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ + D + +T + AP+ + SD++SFGVV+ E++
Sbjct: 199 RVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 97/207 (46%), Gaps = 17/207 (8%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSA-DHPNLVKL 153
+G G + KV L+K +++ A+K + V + + E A +HP LV L
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 154 IGYCAEGDQRLL-VYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
C + + RL V EY+ G L H+ R L +A S L YLHE+
Sbjct: 87 HS-CFQTESRLFFVIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER- 140
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTYGYCAPDYAMT 271
+IYRDLK N+LL+ H KL+D+G+ K G GD T + GT Y AP+
Sbjct: 141 --GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRG 195
Query: 272 GQLTFKSDIYSFGVVLLELITGRKAID 298
F D ++ GV++ E++ GR D
Sbjct: 196 EDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG +G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 122
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY P G + K L L D +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL----SKFDEQRTATYITELAN 124
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS + + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTLDY 177
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVRE-FSAEVMTLGSADHPNLVKL---- 153
LG GGFG V + + + VAIKQ RE + E+ + +HPN+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 154 --IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
+ A D LL EY G L K+L+ + L + + S L+YLHE
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHEN 140
Query: 212 LKQPVIYRDLKCSNILLEEGYHP---KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY 268
+I+RDLK NI+L+ G K+ D G AK D+ + T +GT Y AP+
Sbjct: 141 R---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYLAPEL 194
Query: 269 AMTGQLTFKSDIYSFGVVLLELITG 293
+ T D +SFG + E ITG
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVRE-FSAEVMTLGSADHPNLVKL---- 153
LG GGFG V + + + VAIKQ RE + E+ + +HPN+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 154 --IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
+ A D LL EY G L K+L+ + L + + S L+YLHE
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHEN 141
Query: 212 LKQPVIYRDLKCSNILLEEGYHP---KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY 268
+I+RDLK NI+L+ G K+ D G AK D+ + T +GT Y AP+
Sbjct: 142 R---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYLAPEL 195
Query: 269 AMTGQLTFKSDIYSFGVVLLELITG 293
+ T D +SFG + E ITG
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLG 143
A +F LG+G FG VY ++ + ++A+K QL+ GV+ + EV
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
HPN+++L GY + + L+ EY PLG++ + L L D +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 122
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y H + VI+RD+K N+LL K++DFG + PS + + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDY 175
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
P+ K D++S GV+ E + G+ +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG +G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 122
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG +G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 122
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 12/220 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+ R + LG+G FG+V+ G +V AIK L G F E + H LV
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT-RPLDWNTRMKIAAGASRGLQYLHE 210
+L +E + +V EYM G L L L+ + + L + +AA + G+ Y+
Sbjct: 77 QLYAVVSE-EPIYIVMEYMSKGCL---LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE- 131
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+ ++RDL+ +NIL+ E K++DFGLA++ + T + AP+ A+
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAAL 188
Query: 271 TGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
G+ T KSD++SFG++L EL T GR +R+ L+ V
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 25/211 (11%)
Query: 99 LGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADHPNLVK 152
LG+G FG VY+G I E VA+K ++ R EF E + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTR------PLDWNTRMKIAAGASRGLQ 206
L+G ++G L+V E M G L +L LRP+ P +++AA + G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 207 YLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG---- 262
YL+ + ++RDL N ++ + K+ DFG+ + D + G G
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR-----DIYETAYYRKGGKGLLPV 196
Query: 263 -YCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ G T SD++SFGVVL E+ +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 78 AKPFTFDELAAATGNFRSDC---------CLGEGGFGKVYKGCLEKIEQ---VVAIKQLD 125
A+P T++E A +F + +G G G+V G L Q VAIK L
Sbjct: 27 AEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALK 86
Query: 126 HRGVQ-GVREFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDL 182
+ R+F +E +G DHPN+++L G G ++V EYM GSLD L HD
Sbjct: 87 AGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG 146
Query: 183 RPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLA 242
+ L + + G G++YL + ++RDL N+L++ K+SDFGL+
Sbjct: 147 QFTIMQL-----VGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLS 198
Query: 243 KM---GPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
++ P T ++ + AP+ + SD++SFGVV+ E++
Sbjct: 199 RVLEDDPDAAXTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG +G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 122
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 108/227 (47%), Gaps = 12/227 (5%)
Query: 88 AATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA-EVMTLGSAD 146
+++ F+ LG G + VYKG + VA+K++ +G + E+ +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP--LDWNTRMKIAAGASRG 204
H N+V+L ++ LV+E+M L K++ P L+ N +G
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG 120
Query: 205 LQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYC 264
L + HE +++RDLK N+L+ + KL DFGLA+ G + + + T Y
Sbjct: 121 LAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARA--FGIPVNTFSSEVVTLWYR 175
Query: 265 APDYAMTGQLTFKS--DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
APD M G T+ + DI+S G +L E+ITG+ T D ++L L+
Sbjct: 176 APDVLM-GSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG +G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 122
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG +G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 122
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG +G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 122
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG +G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 121
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 211
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 26/212 (12%)
Query: 99 LGEGGFGKVYKGCLEK--IEQVVAIKQL-DHRGVQGVREFSAEVMTLGS-ADHPNLVKLI 154
+GEG FG+V K ++K + AIK++ ++ R+F+ E+ L HPN++ L+
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRP-DTRP-----------LDWNTRMKIAAGAS 202
G C L EY P G+L L R +T P L + AA +
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG--T 260
RG+ YL ++ I+R+L NIL+ E Y K++DFGL++ G + +V + MG
Sbjct: 150 RGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLP 201
Query: 261 YGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ A + T SD++S+GV+L E+++
Sbjct: 202 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 7/195 (3%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADHPNLVKLIGYC 157
+G G FG+V+ G L +VA+K ++ +F E L HPN+V+LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 158 AEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVI 217
Q+ +Y M L L LR + L T +++ A+ G++YL + I
Sbjct: 182 T---QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 218 YRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFK 277
+RDL N L+ E K+SDFG+++ G + AP+ G+ + +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 278 SDIYSFGVVLLELIT 292
SD++SFG++L E +
Sbjct: 296 SDVWSFGILLWETFS 310
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 99 LGEGGFGKVYKGCLEKIE----QVVAIKQL-DHRGVQGVREFSAEVMTLGSADHPNLVKL 153
LGEG FGKV C + ++VA+K L + G Q + E+ L + H ++VK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 154 IGYCA-EGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
G C +G++ + LV EY+PLGSL +L + + A G+ YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLH-- 129
Query: 212 LKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM----GTYGYCAPD 267
Q I+R L N+LL+ K+ DFGLAK P G H RV + AP+
Sbjct: 130 -AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG---HEYYRVREDGDSPVFWYAPE 185
Query: 268 YAMTGQLTFKSDIYSFGVVLLELIT 292
+ + SD++SFGV L EL+T
Sbjct: 186 CLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG +G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 123
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG +G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 122
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG +G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 122
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG +G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 122
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 97/207 (46%), Gaps = 17/207 (8%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSA-DHPNLVKL 153
+G G + KV L+K +++ A+K + V + + E A +HP LV L
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 154 IGYCAEGDQRLL-VYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
C + + RL V EY+ G L H+ R L +A S L YLHE+
Sbjct: 72 HS-CFQTESRLFFVIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER- 125
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTYGYCAPDYAMT 271
+IYRDLK N+LL+ H KL+D+G+ K G GD T + GT Y AP+
Sbjct: 126 --GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRG 180
Query: 272 GQLTFKSDIYSFGVVLLELITGRKAID 298
F D ++ GV++ E++ GR D
Sbjct: 181 EDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 17/203 (8%)
Query: 98 CLGEGGFGKVYKGCLE---KIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADHPNLVKL 153
+G G FG+V G L+ K + VAIK L + R +F E +G DHPN+V L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
G G ++V E+M G+LD L HD + L + + G + G++YL +
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQL-----VGMLRGIAAGMRYLAD- 163
Query: 212 LKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG--YCAPDYA 269
++RDL NIL+ K+SDFGL+++ D V T G + AP+
Sbjct: 164 --MGYVHRDLAARNILVNSNLVCKVSDFGLSRV-IEDDPEAVYTTTGGKIPVRWTAPEAI 220
Query: 270 MTGQLTFKSDIYSFGVVLLELIT 292
+ T SD++S+G+V+ E+++
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG +G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 123
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 99 LGEGGFGKVYKGCLEKIE----QVVAIKQL-DHRGVQGVREFSAEVMTLGSADHPNLVKL 153
LGEG FGKV C + ++VA+K L + G Q + E+ L + H ++VK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 154 IGYCA-EGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
G C +G++ + LV EY+PLGSL +L + + A G+ YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLH-- 128
Query: 212 LKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM----GTYGYCAPD 267
Q I+R L N+LL+ K+ DFGLAK P G H RV + AP+
Sbjct: 129 -AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG---HEYYRVREDGDSPVFWYAPE 184
Query: 268 YAMTGQLTFKSDIYSFGVVLLELIT 292
+ + SD++SFGV L EL+T
Sbjct: 185 CLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 12/220 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+ R + LG+G FG+V+ G +V AIK L G F E + H LV
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT-RPLDWNTRMKIAAGASRGLQYLHE 210
+L +E + +V EYM G L L L+ + + L + +AA + G+ Y+
Sbjct: 77 QLYAVVSE-EPIYIVTEYMSKGCL---LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE- 131
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+ ++RDL+ +NIL+ E K++DFGLA++ + T + AP+ A+
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAAL 188
Query: 271 TGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
G+ T KSD++SFG++L EL T GR +R+ L+ V
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG +G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 123
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG +G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 123
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG +G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 123
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG +G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 123
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG +G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 122
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 97/207 (46%), Gaps = 17/207 (8%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSA-DHPNLVKL 153
+G G + KV L+K +++ A+K + V + + E A +HP LV L
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 154 IGYCAEGDQRLL-VYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
C + + RL V EY+ G L H+ R L +A S L YLHE+
Sbjct: 76 HS-CFQTESRLFFVIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER- 129
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTYGYCAPDYAMT 271
+IYRDLK N+LL+ H KL+D+G+ K G GD T + GT Y AP+
Sbjct: 130 --GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRG 184
Query: 272 GQLTFKSDIYSFGVVLLELITGRKAID 298
F D ++ GV++ E++ GR D
Sbjct: 185 EDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 15/201 (7%)
Query: 99 LGEGGFGKVYKGCLE---KIEQVVAIKQLDHRGV-QGVREFSAEVMTLGSADHPNLVKLI 154
+G G FG+V G L+ K E VAIK L + R+F +E +G DHPN++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
G + +++ EYM GSLD L +D R L + + G G++YL +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-----VGMLRGIGSGMKYLSD-- 134
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYCAPDYAMT 271
++RDL NIL+ K+SDFG++++ + +TR + AP+
Sbjct: 135 -MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 193
Query: 272 GQLTFKSDIYSFGVVLLELIT 292
+ T SD++S+G+V+ E+++
Sbjct: 194 RKFTSASDVWSYGIVMWEVMS 214
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 12/220 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+ R + LG+G FG+V+ G +V AIK L G F E + H LV
Sbjct: 186 SLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKP-GNMSPEAFLQEAQVMKKLRHEKLV 243
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT-RPLDWNTRMKIAAGASRGLQYLHE 210
+L +E + +V EYM GSL L L+ + + L + +AA + G+ Y+
Sbjct: 244 QLYAVVSE-EPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE- 298
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+ ++RDL+ +NIL+ E K++DFGL ++ + T + AP+ A+
Sbjct: 299 --RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYT-ARQGAKFPIKWTAPEAAL 355
Query: 271 TGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
G+ T KSD++SFG++L EL T GR +R+ L+ V
Sbjct: 356 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 395
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 27/230 (11%)
Query: 98 CLGEGGFGKVYKGCL-----EKIEQVVAIKQLDH-RGVQGVREFSAEVMTLGSADHPNLV 151
+G G FG VY G L +KI A+K L+ + V +F E + + HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIH--CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 152 KLIGYCAEGD-QRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG----ASRGLQ 206
L+G C + L+V YM G DLR R N +K G ++G++
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHG-------DLRNFIRNETHNPTVKDLIGFGLQVAKGMK 147
Query: 207 YLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK--MGPSGDKTHVSTRVMGTYGYC 264
+L + ++RDL N +L+E + K++DFGLA+ D H T +
Sbjct: 148 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLLR 314
A + T + T KSD++SFGV+L EL+T + D ++ +LL+
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQ 252
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 103/210 (49%), Gaps = 23/210 (10%)
Query: 95 SDCCLGEGGFGKVYKGCLEKIEQV-----VAIKQLDH-RGVQGVREFSAEVMTLGSADHP 148
SD +G+G FG VY G E I+Q AIK L +Q V F E + + +HP
Sbjct: 25 SDRVIGKGHFGVVYHG--EYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHP 82
Query: 149 NLVKLIGYC--AEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQ 206
N++ LIG EG +L+ YM G L L +R R + +RG++
Sbjct: 83 NVLALIGIMLPPEGLPHVLL-PYMCHGDL---LQFIRSPQRNPTVKDLISFGLQVARGME 138
Query: 207 YLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK----MGPSGDKTHVSTRVMGTYG 262
YL EQ ++RDL N +L+E + K++DFGLA+ + H R+
Sbjct: 139 YLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL--PVK 193
Query: 263 YCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ A + T + T KSD++SFGV+L EL+T
Sbjct: 194 WTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 27/229 (11%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQVVAIKQLDH-RGVQGVREFSAEVMTLGSADHPNLVK 152
+G G FG VY G L +KI A+K L+ + V +F E + + HPN++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIH--CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 153 LIGYCAEGD-QRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG----ASRGLQY 207
L+G C + L+V YM G DLR R N +K G ++G+++
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHG-------DLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 146
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK--MGPSGDKTHVSTRVMGTYGYCA 265
L + ++RDL N +L+E + K++DFGLA+ D H T + A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLLR 314
+ T + T KSD++SFGV+L EL+T + D ++ +LL+
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQ 250
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 27/230 (11%)
Query: 98 CLGEGGFGKVYKGCL-----EKIEQVVAIKQLDH-RGVQGVREFSAEVMTLGSADHPNLV 151
+G G FG VY G L +KI A+K L+ + V +F E + + HPN++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIH--CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 152 KLIGYCAEGD-QRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG----ASRGLQ 206
L+G C + L+V YM G DLR R N +K G ++G++
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHG-------DLRNFIRNETHNPTVKDLIGFGLQVAKGMK 148
Query: 207 YLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK--MGPSGDKTHVSTRVMGTYGYC 264
+L + ++RDL N +L+E + K++DFGLA+ D H T +
Sbjct: 149 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 205
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLLR 314
A + T + T KSD++SFGV+L EL+T + D ++ +LL+
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQ 253
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 27/230 (11%)
Query: 98 CLGEGGFGKVYKGCL-----EKIEQVVAIKQLDH-RGVQGVREFSAEVMTLGSADHPNLV 151
+G G FG VY G L +KI A+K L+ + V +F E + + HPN++
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIH--CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 152 KLIGYCAEGD-QRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG----ASRGLQ 206
L+G C + L+V YM G DLR R N +K G ++G++
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHG-------DLRNFIRNETHNPTVKDLIGFGLQVAKGMK 152
Query: 207 YLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK--MGPSGDKTHVSTRVMGTYGYC 264
+L + ++RDL N +L+E + K++DFGLA+ D H T +
Sbjct: 153 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 209
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLLR 314
A + T + T KSD++SFGV+L EL+T + D ++ +LL+
Sbjct: 210 ALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQ 257
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSA-DHPNLVKL 153
+G G + KV L+K +++ A++ + V + + E A +HP LV L
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 154 IGYCAEGDQRLL-VYEYMPLGSLDKHLHDLR--PDTRPLDWNTRMKIAAGASRGLQYLHE 210
C + + RL V EY+ G L H+ R P+ ++ + +A L YLHE
Sbjct: 119 HS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------LNYLHE 171
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTYGYCAPDYA 269
+ +IYRDLK N+LL+ H KL+D+G+ K G GD T + GT Y AP+
Sbjct: 172 R---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIAPEIL 225
Query: 270 MTGQLTFKSDIYSFGVVLLELITGRKAID 298
F D ++ GV++ E++ GR D
Sbjct: 226 RGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 98 CLGEGGFGKVYKGCLE---KIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADHPNLVKL 153
+G G FG+V G L+ K E VAIK L + R +F +E +G DHPN++ L
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
G + +++ E+M GSLD LR + + + G + G++YL +
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSF---LRQNDGQFTVIQLVGMLRGIAAGMKYLAD--- 127
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG---TYGYCAPDYAM 270
++R L NIL+ K+SDFGL++ T +G + AP+
Sbjct: 128 MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 271 TGQLTFKSDIYSFGVVLLELIT 292
+ T SD++S+G+V+ E+++
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMS 209
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 27/230 (11%)
Query: 98 CLGEGGFGKVYKGCL-----EKIEQVVAIKQLDH-RGVQGVREFSAEVMTLGSADHPNLV 151
+G G FG VY G L +KI A+K L+ + V +F E + + HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIH--CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 152 KLIGYCAEGD-QRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG----ASRGLQ 206
L+G C + L+V YM G DLR R N +K G ++G++
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHG-------DLRNFIRNETHNPTVKDLIGFGLQVAKGMK 147
Query: 207 YLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK--MGPSGDKTHVSTRVMGTYGYC 264
+L + ++RDL N +L+E + K++DFGLA+ D H T +
Sbjct: 148 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLLR 314
A + T + T KSD++SFGV+L EL+T + D ++ +LL+
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQ 252
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 27/229 (11%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQVVAIKQLDH-RGVQGVREFSAEVMTLGSADHPNLVK 152
+G G FG VY G L +KI A+K L+ + V +F E + + HPN++
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIH--CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 153 LIGYCAEGD-QRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG----ASRGLQY 207
L+G C + L+V YM G DLR R N +K G ++G+++
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHG-------DLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 207
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK--MGPSGDKTHVSTRVMGTYGYCA 265
L + ++RDL N +L+E + K++DFGLA+ D H T + A
Sbjct: 208 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLLR 314
+ T + T KSD++SFGV+L EL+T + D ++ +LL+
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQ 311
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 99 LGEGGFGKVYKGCLE---KIEQVVAIKQLDHRGV-QGVREFSAEVMTLGSADHPNLVKLI 154
+G G FG+V G L+ K E VAIK L + R+F +E +G DHPN++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
G + +++ EYM GSLD LR + + + G G++YL +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAF---LRKNDGRFTVIQLVGMLRGIGSGMKYLSD---M 129
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYCAPDYAMTGQ 273
++RDL NIL+ K+SDFG++++ + +TR + AP+ +
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 189
Query: 274 LTFKSDIYSFGVVLLELIT 292
T SD++S+G+V+ E+++
Sbjct: 190 FTSASDVWSYGIVMWEVMS 208
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G G FG V+ G ++V AIK + G +F E + HP LV+L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKV-AIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
E LV+E+M G L + LR T + + G+ YL E VI+
Sbjct: 73 EQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEE---ASVIH 126
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E K+SDFG+ + D+ ST + +P+ + + KS
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 279 DIYSFGVVLLELITGRKAIDQTKDRKEL 306
D++SFGV++ E+ + K + + E+
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSNSEV 213
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLGSADHPNLVKL 153
LG+G FG VY + + ++A+K QL+ GV+ + EV HPN+++L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE--HQLRREVEIQSHLRHPNILRL 77
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
GY + + L+ EY PLG++ + L L +R + T I A+ L Y H
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKL---SRFDEQRTATYITELAN-ALSYCH---S 130
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ VI+RD+K N+LL K++DFG + PS + + GT Y P+
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----DTLCGTLDYLPPEMIEGRM 186
Query: 274 LTFKSDIYSFGVVLLELITG 293
K D++S GV+ E + G
Sbjct: 187 HDEKVDLWSLGVLCYEFLVG 206
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G G FG V+ G ++V AIK + G +F E + HP LV+L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKV-AIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
E LV+E+M G L + LR T + + G+ YL E VI+
Sbjct: 76 EQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E K+SDFG+ + D+ ST + +P+ + + KS
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 279 DIYSFGVVLLELITGRKAIDQTKDRKEL 306
D++SFGV++ E+ + K + + E+
Sbjct: 189 DVWSFGVLMWEVFSEGKIPYENRSNSEV 216
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G G FG V+ G ++V AIK + G +F E + HP LV+L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKV-AIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
E LV+E+M G L + LR T + + G+ YL E VI+
Sbjct: 71 EQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 124
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E K+SDFG+ + D+ ST + +P+ + + KS
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 279 DIYSFGVVLLELITGRKAIDQTKDRKEL 306
D++SFGV++ E+ + K + + E+
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYENRSNSEV 211
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G G FG V+ G ++V AIK + G +F E + HP LV+L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKV-AIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
E LV+E+M G L + LR T + + G+ YL E VI+
Sbjct: 73 EQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E K+SDFG+ + D+ ST + +P+ + + KS
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 279 DIYSFGVVLLELITGRKAIDQTKDRKEL 306
D++SFGV++ E+ + K + + E+
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSNSEV 213
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G FG+V+ G +V A+K L +G F AE + H LV+L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKV-AVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 74
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+ + ++ EYM GSL L P L N + +AA + G+ ++ E+ I+
Sbjct: 75 Q-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 128
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
R+L+ +NIL+ + K++DFGLA++ + T + AP+ G T KS
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 279 DIYSFGVVLLELIT 292
D++SFG++L E++T
Sbjct: 188 DVWSFGILLTEIVT 201
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 20/200 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G FG+V+ G +V A+K L G V+ F E + + H LV+L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKV-AVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 159 EGDQRLLVYEYMPLGSLDKHLHD------LRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
+ ++ EYM GSL L L P + +A + G+ Y+
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL--------IDFSAQIAEGMAYIE--- 127
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTG 272
++ I+RDL+ +N+L+ E K++DFGLA++ + T + AP+ G
Sbjct: 128 RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFG 186
Query: 273 QLTFKSDIYSFGVVLLELIT 292
T KSD++SFG++L E++T
Sbjct: 187 CFTIKSDVWSFGILLYEIVT 206
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 15/219 (6%)
Query: 98 CLGEGGFGKVYKGCL----EKIEQVVAIKQL-DHRGVQGVREFSAEVMTLGSADHPNLVK 152
LG G FG VYKG E ++ VAIK L ++ + +E E + P + +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDW-NTRMKIAAGASRGLQYLHEQ 211
L+G C +L V + MP G L H+ + R D N M+IA +G+ YL +
Sbjct: 84 LLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIA----KGMSYLEDV 138
Query: 212 LKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMT 271
+++RDL N+L++ H K++DFGLA++ + + + + A + +
Sbjct: 139 R---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILR 195
Query: 272 GQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
+ T +SD++S+GV + EL+T G K D R+ +L+
Sbjct: 196 RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL 234
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 27/229 (11%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQVVAIKQLDH-RGVQGVREFSAEVMTLGSADHPNLVK 152
+G G FG VY G L +KI A+K L+ + V +F E + + HPN++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIH--CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 153 LIGYCAEGD-QRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG----ASRGLQY 207
L+G C + L+V YM G DLR R N +K G ++G++Y
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHG-------DLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 147
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK--MGPSGDKTHVSTRVMGTYGYCA 265
L + ++RDL N +L+E + K++DFGLA+ H T + A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLLR 314
+ T + T KSD++SFGV+L EL+T + D ++ +LL+
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQ 251
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 99 LGEGGFGKVYKGCLE----KIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG G FG V KG + V I + + E AE + D+P +V++I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
G C E + +LV E LG L+K+L R + +++ S G++YL E
Sbjct: 75 GIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES--- 126
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTY--GYCAPDYAMTG 272
++RDL N+LL ++ K+SDFGL+K D+ + + G + + AP+
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 273 QLTFKSDIYSFGVVLLELIT 292
+ + KSD++SFGV++ E +
Sbjct: 186 KFSSKSDVWSFGVLMWEAFS 205
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 99 LGEGGFGKVYKGCLE----KIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG G FG V KG + V I + + E AE + D+P +V++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
G C E + +LV E LG L+K+L R + +++ S G++YL E
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES--- 146
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG--YCAPDYAMTG 272
++RDL N+LL ++ K+SDFGL+K D+ + + G + + AP+
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 273 QLTFKSDIYSFGVVLLELIT 292
+ + KSD++SFGV++ E +
Sbjct: 206 KFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 99 LGEGGFGKVYKGCLE----KIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG G FG V KG + V I + + E AE + D+P +V++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
G C E + +LV E LG L+K+L R + +++ S G++YL E
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES--- 146
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG--YCAPDYAMTG 272
++RDL N+LL ++ K+SDFGL+K D+ + + G + + AP+
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 273 QLTFKSDIYSFGVVLLELIT 292
+ + KSD++SFGV++ E +
Sbjct: 206 KFSSKSDVWSFGVLMWEAFS 225
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 99 LGEGGFGKVYKGCLE----KIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG G FG V KG + V I + + E AE + D+P +V++I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
G C E + +LV E LG L+K+L R + +++ S G++YL E
Sbjct: 73 GIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES--- 124
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTY--GYCAPDYAMTG 272
++RDL N+LL ++ K+SDFGL+K D+ + + G + + AP+
Sbjct: 125 NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 273 QLTFKSDIYSFGVVLLELIT 292
+ + KSD++SFGV++ E +
Sbjct: 184 KFSSKSDVWSFGVLMWEAFS 203
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG G+V E+ VA+K +D R V E+ +H N+VK G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 158 AEGDQRLLVYEYMPLGSL-DKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
EG+ + L EY G L D+ D+ PD + + G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLH---G 122
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+ +RD+K N+LL+E + K+SDFGLA + ++ + ++ GT Y AP+ +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 274 LTFKS-DIYSFGVVLLELITGRKAIDQTKD 302
+ D++S G+VL ++ G DQ D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 99 LGEGGFGKVYKGCLE----KIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG G FG V KG + V I + + E AE + D+P +V++I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
G C E + +LV E LG L+K+L R + +++ S G++YL E
Sbjct: 85 GIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES--- 136
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTY--GYCAPDYAMTG 272
++RDL N+LL ++ K+SDFGL+K D+ + + G + + AP+
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 195
Query: 273 QLTFKSDIYSFGVVLLELIT 292
+ + KSD++SFGV++ E +
Sbjct: 196 KFSSKSDVWSFGVLMWEAFS 215
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 99 LGEGGFGKVYKGCLE----KIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG G FG V KG + V I + + E AE + D+P +V++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
G C E + +LV E LG L+K+L R + +++ S G++YL E
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES--- 130
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG--YCAPDYAMTG 272
++RDL N+LL ++ K+SDFGL+K D+ + + G + + AP+
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 273 QLTFKSDIYSFGVVLLELIT 292
+ + KSD++SFGV++ E +
Sbjct: 190 KFSSKSDVWSFGVLMWEAFS 209
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 46/224 (20%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAE--VMTLGSADHPNLVKLIGY 156
+G G +G VYKG L+ E+ VA+K Q F E + + +H N+ + I
Sbjct: 21 IGRGRYGAVYKGSLD--ERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIV- 74
Query: 157 CAEGDQR---------LLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
GD+R LLV EY P GSL K+L DW + ++A +RGL Y
Sbjct: 75 ---GDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSSCRLAHSVTRGLAY 126
Query: 208 LHEQL------KQPVIYRDLKCSNILLEEGYHPKLSDFGLA------KMGPSGDKTHVST 255
LH +L K + +RDL N+L++ +SDFGL+ ++ G++ + +
Sbjct: 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI 186
Query: 256 RVMGTYGYCAPDYAMTGQLTFKS--------DIYSFGVVLLELI 291
+GT Y AP+ + G + + D+Y+ G++ E+
Sbjct: 187 SEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 111/227 (48%), Gaps = 23/227 (10%)
Query: 88 AATGNFRSDCCLGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQGVREFSAEVM-- 140
A F LG+G FGKV+ ++KI Q+ A+K L + VR+ M
Sbjct: 22 ADPSQFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLK-KATLKVRDRVRTKMER 78
Query: 141 -TLGSADHPNLVKLIGYCAEGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIA 198
L +HP +VKL Y + + +L L+ +++ G L L + + + + +A
Sbjct: 79 DILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLA 134
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM 258
A L +LH +IYRDLK NILL+E H KL+DFGL+K S D +
Sbjct: 135 ELAL-ALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFC 188
Query: 259 GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKE 305
GT Y AP+ T +D +SFGV++ E++TG Q KDRKE
Sbjct: 189 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF-QGKDRKE 234
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 99 LGEGGFGKVYKGCLE----KIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG G FG V KG + V I + + E AE + D+P +V++I
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
G C E + +LV E LG L+K+L R + +++ S G++YL E
Sbjct: 93 GIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES--- 144
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG--YCAPDYAMTG 272
++RDL N+LL ++ K+SDFGL+K D+ + + G + + AP+
Sbjct: 145 NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 203
Query: 273 QLTFKSDIYSFGVVLLELIT 292
+ + KSD++SFGV++ E +
Sbjct: 204 KFSSKSDVWSFGVLMWEAFS 223
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 9/214 (4%)
Query: 79 KPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAE 138
KP+ D + LG G G+V+ G +V A+K L +G F AE
Sbjct: 1 KPWWEDAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAE 58
Query: 139 VMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIA 198
+ H LV+L + + ++ EYM GSL L P L N + +A
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMA 115
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM 258
A + G+ ++ E+ I+RDL+ +NIL+ + K++DFGLA++ + T
Sbjct: 116 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXT-AREGAK 171
Query: 259 GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ G T KSD++SFG++L E++T
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 111/227 (48%), Gaps = 23/227 (10%)
Query: 88 AATGNFRSDCCLGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQGVREFSAEVM-- 140
A F LG+G FGKV+ ++KI Q+ A+K L + VR+ M
Sbjct: 21 ADPSQFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLK-KATLKVRDRVRTKMER 77
Query: 141 -TLGSADHPNLVKLIGYCAEGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIA 198
L +HP +VKL Y + + +L L+ +++ G L L + + + + +A
Sbjct: 78 DILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLA 133
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM 258
A L +LH +IYRDLK NILL+E H KL+DFGL+K S D +
Sbjct: 134 ELAL-ALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFC 187
Query: 259 GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKE 305
GT Y AP+ T +D +SFGV++ E++TG Q KDRKE
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF-QGKDRKE 233
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 109/217 (50%), Gaps = 23/217 (10%)
Query: 98 CLGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQGVREFSAEVM---TLGSADHPN 149
LG+G FGKV+ ++KI Q+ A+K L + VR+ M L +HP
Sbjct: 31 VLGQGSFGKVF--LVKKISGSDARQLYAMKVLK-KATLKVRDRVRTKMERDILVEVNHPF 87
Query: 150 LVKLIGYCAEGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYL 208
+VKL Y + + +L L+ +++ G L L + + + + +A A L +L
Sbjct: 88 IVKL-HYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAELAL-ALDHL 142
Query: 209 HEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY 268
H +IYRDLK NILL+E H KL+DFGL+K +K S GT Y AP+
Sbjct: 143 HSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEV 197
Query: 269 AMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKE 305
T +D +SFGV++ E++TG Q KDRKE
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLPF-QGKDRKE 233
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFS---AEVMTLGSADHPNLVKLIG 155
+G G FG VY + +VVAIK++ + G Q ++ EV L HPN ++ G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQP 215
LV EY LGS L + +PL + GA +GL YLH
Sbjct: 122 CYLREHTAWLVMEYC-LGSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLH---SHN 174
Query: 216 VIYRDLKCSNILLEEGYHPKLSDFGLAK-MGPSGDKTHVSTRVMGTYGYCAPDYAMT--- 271
+I+RD+K NILL E KL DFG A M P + +GT + AP+ +
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANXFVGTPYWMAPEVILAMDE 227
Query: 272 GQLTFKSDIYSFGVVLLEL 290
GQ K D++S G+ +EL
Sbjct: 228 GQYDGKVDVWSLGITCIEL 246
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFS---AEVMTLGSADHPNLVKLIG 155
+G G FG VY + +VVAIK++ + G Q ++ EV L HPN ++ G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQP 215
LV EY LGS L + +PL + GA +GL YLH
Sbjct: 83 CYLREHTAWLVMEYC-LGSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLH---SHN 135
Query: 216 VIYRDLKCSNILLEEGYHPKLSDFGLAK-MGPSGDKTHVSTRVMGTYGYCAPDYAMT--- 271
+I+RD+K NILL E KL DFG A M P + +GT + AP+ +
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANXFVGTPYWMAPEVILAMDE 188
Query: 272 GQLTFKSDIYSFGVVLLEL 290
GQ K D++S G+ +EL
Sbjct: 189 GQYDGKVDVWSLGITCIEL 207
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 95 SDCCLGEGGFGKVYKGC--LEKIEQVVAIKQLDHRGVQG-VREFSAEVMTLGSADHPNLV 151
+D LG G FG V +G + K + VAIK L + E E + D+P +V
Sbjct: 14 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 73
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
+LIG C + + +LV E G L K L R + P+ + ++ S G++YL E+
Sbjct: 74 RLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEI-PV--SNVAELLHQVSMGMKYLEEK 129
Query: 212 LKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG--YCAPDYA 269
++RDL N+LL ++ K+SDFGL+K D ++ + R G + + AP+
Sbjct: 130 ---NFVHRDLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAPECI 185
Query: 270 MTGQLTFKSDIYSFGVVLLELIT-GRKAIDQTK 301
+ + +SD++S+GV + E ++ G+K + K
Sbjct: 186 NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 218
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 25/234 (10%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSAD----- 146
FR LG+GGFG+V C ++ + + +++ E M L
Sbjct: 185 TFRQYRVLGKGGFGEV---CACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 147 HPNLVKLIGYCAEG-DQRLLVYEYMPLGSLDKHLHDL----RPDTRPLDWNTRMKIAAGA 201
+ V + Y E D LV M G L H++ + P+ R + + AA
Sbjct: 242 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY------AAEI 295
Query: 202 SRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTY 261
GL+ LH ++ ++YRDLK NILL++ H ++SD GLA P G + RV GT
Sbjct: 296 CCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV-GTV 349
Query: 262 GYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLLRK 315
GY AP+ + TF D ++ G +L E+I G+ Q K + + V L+++
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE 403
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 27/229 (11%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQVVAIKQLDH-RGVQGVREFSAEVMTLGSADHPNLVK 152
+G G FG VY G L +KI A+K L+ + V +F E + + HPN++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIH--CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 153 LIGYCAEGD-QRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG----ASRGLQY 207
L+G C + L+V YM G DLR R N +K G ++G++Y
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHG-------DLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 147
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK--MGPSGDKTHVSTRVMGTYGYCA 265
L + ++RDL N +L+E + K++DFGLA+ H T + A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLLR 314
+ T + T KSD++SFGV+L EL+T + D ++ +LL+
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQ 251
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 98 CLGEGGFGKVYKGCL---EKIEQVVAIKQLDHRGVQGVRE-FSAEVMTLGSADHPNLVKL 153
C+GEG FG V++G E VAIK + VRE F E +T+ DHP++VKL
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
IG E V+ M L +L + L+ LD + + A S L YL +
Sbjct: 77 IGVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR- 131
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
++RD+ N+L+ KL DFGL++ S + + AP+ +
Sbjct: 132 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPI-KWMAPESINFRR 188
Query: 274 LTFKSDIYSFGVVLLELI 291
T SD++ FGV + E++
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 99 LGEGGFGKVYKGCLEK----IEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG G FG V+ +E+ +E+V+ D V + + AE+ L S DHPN++K+
Sbjct: 30 LGSGAFGDVH--LVEERSSGLERVIKTINKDRSQV-PMEQIEAEIEVLKSLDHPNIIKIF 86
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ +V E G L + + + + L ++ L Y H Q
Sbjct: 87 EVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQ 143
Query: 215 PVIYRDLKCSNILLEEG--YHP-KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMT 271
V+++DLK NIL ++ + P K+ DFGLA++ S + ST GT Y AP+
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAPE-VFK 199
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
+TFK DI+S GVV+ L+TG
Sbjct: 200 RDVTFKCDIWSAGVVMYFLLTG 221
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 98 CLGEGGFGKVYKGCL---EKIEQVVAIKQLDHRGVQGVRE-FSAEVMTLGSADHPNLVKL 153
C+GEG FG V++G E VAIK + VRE F E +T+ DHP++VKL
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
IG E V+ M L +L + L+ LD + + A S L YL +
Sbjct: 457 IGVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR- 511
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV-STRVMGTYGYCAPDYAMTG 272
++RD+ N+L+ KL DFGL++ D T+ +++ + AP+
Sbjct: 512 --FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFR 567
Query: 273 QLTFKSDIYSFGVVLLELI 291
+ T SD++ FGV + E++
Sbjct: 568 RFTSASDVWMFGVCMWEIL 586
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 27/229 (11%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQVVAIKQLDH-RGVQGVREFSAEVMTLGSADHPNLVK 152
+G G FG VY G L +KI A+K L+ + V +F E + + HPN++
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIH--CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 153 LIGYCAEGD-QRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG----ASRGLQY 207
L+G C + L+V YM G DLR R N +K G ++G++Y
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHG-------DLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 166
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK--MGPSGDKTHVSTRVMGTYGYCA 265
L + ++RDL N +L+E + K++DFGLA+ H T + A
Sbjct: 167 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLLR 314
+ T + T KSD++SFGV+L EL+T + D ++ +LL+
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQ 270
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 27/229 (11%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQVVAIKQLDH-RGVQGVREFSAEVMTLGSADHPNLVK 152
+G G FG VY G L +KI A+K L+ + V +F E + + HPN++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIH--CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 153 LIGYCAEGD-QRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG----ASRGLQY 207
L+G C + L+V YM G DLR R N +K G ++G++Y
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHG-------DLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 148
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK--MGPSGDKTHVSTRVMGTYGYCA 265
L + ++RDL N +L+E + K++DFGLA+ H T + A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLLR 314
+ T + T KSD++SFGV+L EL+T + D ++ +LL+
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQ 252
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G G FG V+ G ++V AIK + G +F E + HP LV+L G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKV-AIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
E LV+E+M G L + LR T + + G+ YL E VI+
Sbjct: 93 EQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 146
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E K+SDFG+ + D+ ST + +P+ + + KS
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 279 DIYSFGVVLLELITGRKAIDQTKDRKEL 306
D++SFGV++ E+ + K + + E+
Sbjct: 206 DVWSFGVLMWEVFSEGKIPYENRSNSEV 233
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 13/200 (6%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQL---DHRGVQGVREFSAEVMTLGSADHPNLVKLIG 155
LG GG VY + VAIK + + ++ F EV H N+V +I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQP 215
E D LV EY+ +L +++ PL +T + G+++ H+
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAHDM---R 131
Query: 216 VIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLT 275
+++RD+K NIL++ K+ DFG+AK T + V+GT Y +P+ A G+ T
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQA-KGEAT 189
Query: 276 FK-SDIYSFGVVLLELITGR 294
+ +DIYS G+VL E++ G
Sbjct: 190 DECTDIYSIGIVLYEMLVGE 209
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 27/229 (11%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQVVAIKQLDH-RGVQGVREFSAEVMTLGSADHPNLVK 152
+G G FG VY G L +KI A+K L+ + V +F E + + HPN++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIH--CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 153 LIGYCAEGD-QRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG----ASRGLQY 207
L+G C + L+V YM G DLR R N +K G ++G++Y
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHG-------DLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 148
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK--MGPSGDKTHVSTRVMGTYGYCA 265
L + ++RDL N +L+E + K++DFGLA+ H T + A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLLR 314
+ T + T KSD++SFGV+L EL+T + D ++ +LL+
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQ 252
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 25/234 (10%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSAD----- 146
FR LG+GGFG+V C ++ + + +++ E M L
Sbjct: 185 TFRQYRVLGKGGFGEV---CACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 147 HPNLVKLIGYCAEG-DQRLLVYEYMPLGSLDKHLHDL----RPDTRPLDWNTRMKIAAGA 201
+ V + Y E D LV M G L H++ + P+ R + + AA
Sbjct: 242 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY------AAEI 295
Query: 202 SRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTY 261
GL+ LH ++ ++YRDLK NILL++ H ++SD GLA P G + RV GT
Sbjct: 296 CCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV-GTV 349
Query: 262 GYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLLRK 315
GY AP+ + TF D ++ G +L E+I G+ Q K + + V L+++
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE 403
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 99 LGEGGFGKVYKGCLE----KIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG G FG V KG + V I + + E AE + D+P +V++I
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
G C E + +LV E LG L+K+L R + +++ S G++YL E
Sbjct: 437 GIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES--- 488
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG--YCAPDYAMTG 272
++RDL N+LL ++ K+SDFGL+K D+ + + G + + AP+
Sbjct: 489 NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 547
Query: 273 QLTFKSDIYSFGVVLLELIT 292
+ + KSD++SFGV++ E +
Sbjct: 548 KFSSKSDVWSFGVLMWEAFS 567
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 9/208 (4%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G G FG V+ G ++V AIK + G +F E + HP LV+L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKV-AIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
E LV E+M G L + LR T + + G+ YL E VI+
Sbjct: 74 EQAPICLVTEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 127
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ E K+SDFG+ + D+ ST + +P+ + + KS
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 279 DIYSFGVVLLELITGRKAIDQTKDRKEL 306
D++SFGV++ E+ + K + + E+
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYENRSNSEV 214
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 27/229 (11%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQVVAIKQLDH-RGVQGVREFSAEVMTLGSADHPNLVK 152
+G G FG VY G L +KI A+K L+ + V +F E + + HPN++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIH--CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 153 LIGYCAEGD-QRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG----ASRGLQY 207
L+G C + L+V YM G DLR R N +K G ++G++Y
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHG-------DLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 146
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK--MGPSGDKTHVSTRVMGTYGYCA 265
L + ++RDL N +L+E + K++DFGLA+ H T + A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLLR 314
+ T + T KSD++SFGV+L EL+T + D ++ +LL+
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQ 250
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 27/229 (11%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQVVAIKQLDH-RGVQGVREFSAEVMTLGSADHPNLVK 152
+G G FG VY G L +KI A+K L+ + V +F E + + HPN++
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIH--CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 153 LIGYCAEGD-QRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG----ASRGLQY 207
L+G C + L+V YM G DLR R N +K G ++G++Y
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHG-------DLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 143
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK--MGPSGDKTHVSTRVMGTYGYCA 265
L + ++RDL N +L+E + K++DFGLA+ H T + A
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLLR 314
+ T + T KSD++SFGV+L EL+T + D ++ +LL+
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQ 247
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 98 CLGEGGFGKVYKGCL---EKIEQVVAIKQLDHRGVQGVRE-FSAEVMTLGSADHPNLVKL 153
C+GEG FG V++G E VAIK + VRE F E +T+ DHP++VKL
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
IG E V+ M L +L + L+ LD + + A S L YL +
Sbjct: 77 IGVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR- 131
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV-STRVMGTYGYCAPDYAMTG 272
++RD+ N+L+ KL DFGL++ D T+ +++ + AP+
Sbjct: 132 --FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 273 QLTFKSDIYSFGVVLLELI 291
+ T SD++ FGV + E++
Sbjct: 188 RFTSASDVWMFGVCMWEIL 206
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 27/229 (11%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQVVAIKQLDH-RGVQGVREFSAEVMTLGSADHPNLVK 152
+G G FG VY G L +KI A+K L+ + V +F E + + HPN++
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIH--CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 153 LIGYCAEGD-QRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG----ASRGLQY 207
L+G C + L+V YM G DLR R N +K G ++G++Y
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHG-------DLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 167
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK--MGPSGDKTHVSTRVMGTYGYCA 265
L + ++RDL N +L+E + K++DFGLA+ H T + A
Sbjct: 168 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLLR 314
+ T + T KSD++SFGV+L EL+T + D ++ +LL+
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQ 271
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 99 LGEGGFGKVYKGCLE----KIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG G FG V KG + V I + + E AE + D+P +V++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
G C E + +LV E LG L+K+L R + +++ S G++YL E
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES--- 130
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG--YCAPDYAMTG 272
++RDL N+LL ++ K+SDFGL+K D+ + G + + AP+
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENXYKAQTHGKWPVKWYAPECINYY 189
Query: 273 QLTFKSDIYSFGVVLLELIT 292
+ + KSD++SFGV++ E +
Sbjct: 190 KFSSKSDVWSFGVLMWEAFS 209
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 27/229 (11%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQVVAIKQLDH-RGVQGVREFSAEVMTLGSADHPNLVK 152
+G G FG VY G L +KI A+K L+ + V +F E + + HPN++
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIH--CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 153 LIGYCAEGD-QRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG----ASRGLQY 207
L+G C + L+V YM G DLR R N +K G ++G++Y
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHG-------DLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 140
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK--MGPSGDKTHVSTRVMGTYGYCA 265
L + ++RDL N +L+E + K++DFGLA+ H T + A
Sbjct: 141 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLLR 314
+ T + T KSD++SFGV+L EL+T + D ++ +LL+
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQ 244
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 27/229 (11%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQVVAIKQLDH-RGVQGVREFSAEVMTLGSADHPNLVK 152
+G G FG VY G L +KI A+K L+ + V +F E + + HPN++
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIH--CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 153 LIGYCAEGD-QRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG----ASRGLQY 207
L+G C + L+V YM G DLR R N +K G ++G++Y
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHG-------DLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 145
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK--MGPSGDKTHVSTRVMGTYGYCA 265
L + ++RDL N +L+E + K++DFGLA+ H T + A
Sbjct: 146 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLLR 314
+ T + T KSD++SFGV+L EL+T + D ++ +LL+
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLLQ 249
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 23/227 (10%)
Query: 88 AATGNFRSDCCLGEGGFGKVYKGCLEKIEQ-----VVAIKQLDHRGVQGVREFSAEVM-- 140
A +F LG+G FGKV+ + K+ + + A+K L + VR+ M
Sbjct: 25 ADPSHFELLKVLGQGSFGKVF--LVRKVTRPDSGHLYAMKVLK-KATLKVRDRVRTKMER 81
Query: 141 -TLGSADHPNLVKLIGYCAEGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIA 198
L +HP +VKL Y + + +L L+ +++ G L L + + + + +A
Sbjct: 82 DILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLA 137
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM 258
A GL +LH +IYRDLK NILL+E H KL+DFGL+K +K S
Sbjct: 138 ELA-LGLDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FC 191
Query: 259 GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKE 305
GT Y AP+ + +D +S+GV++ E++TG Q KDRKE
Sbjct: 192 GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF-QGKDRKE 237
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 99 LGEGGFGKVYKGCLE----KIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG G FG V KG + V I + + E AE + D+P +V++I
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
G C E + +LV E LG L+K+L R + +++ S G++YL E
Sbjct: 438 GIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES--- 489
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG--YCAPDYAMTG 272
++RDL N+LL ++ K+SDFGL+K D+ + + G + + AP+
Sbjct: 490 NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 548
Query: 273 QLTFKSDIYSFGVVLLELIT 292
+ + KSD++SFGV++ E +
Sbjct: 549 KFSSKSDVWSFGVLMWEAFS 568
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 98 CLGEGGFGKVYKGCL---EKIEQVVAIKQLDHRGVQGVRE-FSAEVMTLGSADHPNLVKL 153
C+GEG FG V++G E VAIK + VRE F E +T+ DHP++VKL
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
IG E V+ M L +L + L+ LD + + A S L YL +
Sbjct: 457 IGVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR- 511
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV-STRVMGTYGYCAPDYAMTG 272
++RD+ N+L+ KL DFGL++ D T+ +++ + AP+
Sbjct: 512 --FVHRDIAARNVLVSATDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFR 567
Query: 273 QLTFKSDIYSFGVVLLELI 291
+ T SD++ FGV + E++
Sbjct: 568 RFTSASDVWMFGVCMWEIL 586
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 98 CLGEGGFGKVYKGCLEKIEQ---VVAIKQLDHRGVQGVRE-FSAEVMTLGSADHPNLVKL 153
C+GEG FG V++G E VAIK + VRE F E +T+ DHP++VKL
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
IG E V+ M L +L + L+ LD + + A S L YL +
Sbjct: 74 IGVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR- 128
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV-STRVMGTYGYCAPDYAMTG 272
++RD+ N+L+ KL DFGL++ D T+ +++ + AP+
Sbjct: 129 --FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFR 184
Query: 273 QLTFKSDIYSFGVVLLELI 291
+ T SD++ FGV + E++
Sbjct: 185 RFTSASDVWMFGVCMWEIL 203
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 98 CLGEGGFGKVYKGCLEKIEQ---VVAIKQLDHRGVQGVRE-FSAEVMTLGSADHPNLVKL 153
C+GEG FG V++G E VAIK + VRE F E +T+ DHP++VKL
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 78
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
IG E V+ M L +L + L+ LD + + A S L YL +
Sbjct: 79 IGVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR- 133
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV-STRVMGTYGYCAPDYAMTG 272
++RD+ N+L+ KL DFGL++ D T+ +++ + AP+
Sbjct: 134 --FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFR 189
Query: 273 QLTFKSDIYSFGVVLLELI 291
+ T SD++ FGV + E++
Sbjct: 190 RFTSASDVWMFGVCMWEIL 208
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 12/213 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G+G G VY Q VAI+Q++ + E++ + +PN+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
GD+ +V EY+ GSL + + D +IAA LQ L VI+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMD--------EGQIAAVCRECLQALEFLHSNQVIH 139
Query: 219 RDLKCSNILLEEGYHPKLSDFGL-AKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFK 277
RD+K NILL KL+DFG A++ P K + ++GT + AP+ K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAPEVVTRKAYGPK 196
Query: 278 SDIYSFGVVLLELITGRKAIDQTKDRKELNLVA 310
DI+S G++ +E+I G + L L+A
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 229
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 99 LGEGGFGKVYKGCLEKIE---QVVAIKQLDHRGV---QGVREFSAEVMTLGSADHPNLVK 152
LG+G FG V +G + VA+K L + + + +F EV + S DH NL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
L G ++ V E PLGSL L LR T + A + G+ YL +
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 135
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYCAPDYAMT 271
I+RDL N+LL K+ DFGL + P D +V + +CAP+ T
Sbjct: 136 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 272 GQLTFKSDIYSFGVVLLELIT 292
+ SD + FGV L E+ T
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 98 CLGEGGFGKVYKGCLEKIEQ---VVAIKQLDHRGVQGVRE-FSAEVMTLGSADHPNLVKL 153
C+GEG FG V++G E VAIK + VRE F E +T+ DHP++VKL
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 79
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
IG E V+ M L +L + L+ LD + + A S L YL +
Sbjct: 80 IGVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR- 134
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV-STRVMGTYGYCAPDYAMTG 272
++RD+ N+L+ KL DFGL++ D T+ +++ + AP+
Sbjct: 135 --FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFR 190
Query: 273 QLTFKSDIYSFGVVLLELI 291
+ T SD++ FGV + E++
Sbjct: 191 RFTSASDVWMFGVCMWEIL 209
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 98 CLGEGGFGKVYKGCLEKIEQ---VVAIKQLDHRGVQGVRE-FSAEVMTLGSADHPNLVKL 153
C+GEG FG V++G E VAIK + VRE F E +T+ DHP++VKL
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
IG E V+ M L +L + L+ LD + + A S L YL +
Sbjct: 77 IGVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR- 131
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV-STRVMGTYGYCAPDYAMTG 272
++RD+ N+L+ KL DFGL++ D T+ +++ + AP+
Sbjct: 132 --FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 273 QLTFKSDIYSFGVVLLELI 291
+ T SD++ FGV + E++
Sbjct: 188 RFTSASDVWMFGVCMWEIL 206
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 12/213 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G+G G VY Q VAI+Q++ + E++ + +PN+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
GD+ +V EY+ GSL + + D +IAA LQ L VI+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMD--------EGQIAAVCRECLQALEFLHSNQVIH 139
Query: 219 RDLKCSNILLEEGYHPKLSDFGL-AKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFK 277
RD+K NILL KL+DFG A++ P K + ++GT + AP+ K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 278 SDIYSFGVVLLELITGRKAIDQTKDRKELNLVA 310
DI+S G++ +E+I G + L L+A
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 229
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 99 LGEGGFGKVYKGCLEKIE---QVVAIKQLDHRGV---QGVREFSAEVMTLGSADHPNLVK 152
LG+G FG V +G + VA+K L + + + +F EV + S DH NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
L G ++ V E PLGSL L LR T + A + G+ YL +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 131
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYCAPDYAMT 271
I+RDL N+LL K+ DFGL + P D +V + +CAP+ T
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 272 GQLTFKSDIYSFGVVLLELIT 292
+ SD + FGV L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 16/205 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHPNLVKLIG 155
LG G FGKV G E VA+K L+ + ++ V + E+ L HP+++KL
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQP 215
+ +V EY+ G L D LD ++ G+ Y H +
Sbjct: 84 VISTPSDIFMVMEYVSGGEL----FDYICKNGRLDEKESRRLFQQILSGVDYCHRHM--- 136
Query: 216 VIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLT 275
V++RDLK N+LL+ + K++DFGL+ M G+ S G+ Y AP+ ++G+L
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPE-VISGRLY 192
Query: 276 F--KSDIYSFGVVLLELITGRKAID 298
+ DI+S GV+L L+ G D
Sbjct: 193 AGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 99 LGEGGFGKVYKGCLEKIE---QVVAIKQLDHRGV---QGVREFSAEVMTLGSADHPNLVK 152
LG+G FG V +G + VA+K L + + + +F EV + S DH NL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
L G ++ V E PLGSL L LR T + A + G+ YL +
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 135
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYCAPDYAMT 271
I+RDL N+LL K+ DFGL + P D +V + +CAP+ T
Sbjct: 136 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 272 GQLTFKSDIYSFGVVLLELIT 292
+ SD + FGV L E+ T
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 12/213 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G+G G VY Q VAI+Q++ + E++ + +PN+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
GD+ +V EY+ GSL + + D +IAA LQ L VI+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMD--------EGQIAAVCRECLQALEFLHSNQVIH 139
Query: 219 RDLKCSNILLEEGYHPKLSDFGL-AKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFK 277
RD+K NILL KL+DFG A++ P K + ++GT + AP+ K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRKAYGPK 196
Query: 278 SDIYSFGVVLLELITGRKAIDQTKDRKELNLVA 310
DI+S G++ +E+I G + L L+A
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 229
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 99 LGEGGFGKVYKGCLEKIE---QVVAIKQLDHRGV---QGVREFSAEVMTLGSADHPNLVK 152
LG+G FG V +G + VA+K L + + + +F EV + S DH NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
L G ++ V E PLGSL L LR T + A + G+ YL +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 131
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYCAPDYAMT 271
I+RDL N+LL K+ DFGL + P D +V + +CAP+ T
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 272 GQLTFKSDIYSFGVVLLELIT 292
+ SD + FGV L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 98 CLGEGGFGKVYKGCLEKIEQ---VVAIKQLDHRGVQGVRE-FSAEVMTLGSADHPNLVKL 153
C+GEG FG V++G E VAIK + VRE F E +T+ DHP++VKL
Sbjct: 45 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 104
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
IG E V+ M L +L + L+ LD + + A S L YL +
Sbjct: 105 IGVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR- 159
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV-STRVMGTYGYCAPDYAMTG 272
++RD+ N+L+ KL DFGL++ D T+ +++ + AP+
Sbjct: 160 --FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFR 215
Query: 273 QLTFKSDIYSFGVVLLELI 291
+ T SD++ FGV + E++
Sbjct: 216 RFTSASDVWMFGVCMWEIL 234
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 99 LGEGGFGKVYKGCLEKIE---QVVAIKQLDHRGV---QGVREFSAEVMTLGSADHPNLVK 152
LG+G FG V +G + VA+K L + + + +F EV + S DH NL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
L G ++ V E PLGSL L LR T + A + G+ YL +
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 141
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYCAPDYAMT 271
I+RDL N+LL K+ DFGL + P D +V + +CAP+ T
Sbjct: 142 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 272 GQLTFKSDIYSFGVVLLELIT 292
+ SD + FGV L E+ T
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 98 CLGEGGFGKVYKGCLEKIEQ---VVAIKQLDHRGVQGVRE-FSAEVMTLGSADHPNLVKL 153
C+GEG FG V++G E VAIK + VRE F E +T+ DHP++VKL
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
IG E V+ M L +L + L+ LD + + A S L YL +
Sbjct: 82 IGVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR- 136
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV-STRVMGTYGYCAPDYAMTG 272
++RD+ N+L+ KL DFGL++ D T+ +++ + AP+
Sbjct: 137 --FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFR 192
Query: 273 QLTFKSDIYSFGVVLLELI 291
+ T SD++ FGV + E++
Sbjct: 193 RFTSASDVWMFGVCMWEIL 211
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 12/213 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G+G G VY Q VAI+Q++ + E++ + +PN+V +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
GD+ +V EY+ GSL + + D +IAA LQ L VI+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMD--------EGQIAAVCRECLQALEFLHSNQVIH 140
Query: 219 RDLKCSNILLEEGYHPKLSDFGL-AKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFK 277
RD+K NILL KL+DFG A++ P K + ++GT + AP+ K
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRKAYGPK 197
Query: 278 SDIYSFGVVLLELITGRKAIDQTKDRKELNLVA 310
DI+S G++ +E+I G + L L+A
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 230
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 98 CLGEGGFGKVYKGCL---EKIEQVVAIKQLDHRGVQGVRE-FSAEVMTLGSADHPNLVKL 153
C+GEG FG V++G E VAIK + VRE F E +T+ DHP++VKL
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
IG E V+ M L +L + L+ LD + + A S L YL +
Sbjct: 77 IGVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR- 131
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV-STRVMGTYGYCAPDYAMTG 272
++RD+ N+L+ KL DFGL++ D T+ +++ + AP+
Sbjct: 132 --FVHRDIAARNVLVSATDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 273 QLTFKSDIYSFGVVLLELI 291
+ T SD++ FGV + E++
Sbjct: 188 RFTSASDVWMFGVCMWEIL 206
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 16/207 (7%)
Query: 99 LGEGGFGKVYKGC---LEKIEQV--VAIKQLDHRGVQGVREFSAEVMTLGS--ADHPNLV 151
LG G FGKV + L K + V VA+K L +E + + S H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLH-----DL-RPDTRPLDWNTRMKIAAGASRGL 205
L+G C G L++ EY G L L DL + D RPL+ + ++ ++G+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 206 QYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCA 265
+L + I+RD+ N+LL G+ K+ DFGLA+ + V + A
Sbjct: 174 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 230
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELIT 292
P+ T +SD++S+G++L E+ +
Sbjct: 231 PESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 16/207 (7%)
Query: 99 LGEGGFGKVYKGC---LEKIEQV--VAIKQLDHRGVQGVREFSAEVMTLGS--ADHPNLV 151
LG G FGKV + L K + V VA+K L +E + + S H N+V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLH-----DL-RPDTRPLDWNTRMKIAAGASRGL 205
L+G C G L++ EY G L L DL + D RPL+ + ++ ++G+
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 206 QYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCA 265
+L + I+RD+ N+LL G+ K+ DFGLA+ + V + A
Sbjct: 166 AFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 222
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELIT 292
P+ T +SD++S+G++L E+ +
Sbjct: 223 PESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 24/237 (10%)
Query: 71 SNNSGKSAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQ 130
S++ +S L G F +G G +G+VYKG K Q+ AIK +D G +
Sbjct: 4 SDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE 63
Query: 131 GVREFSAEVMTLGS-ADHPNLVKLIGYCAE------GDQRLLVYEYMPLGSLDKHLHDLR 183
E E+ L + H N+ G + DQ LV E+ GS+ + + +
Sbjct: 64 E-EEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK 122
Query: 184 PDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK 243
+T +W I RGL +LH+ VI+RD+K N+LL E KL DFG++
Sbjct: 123 GNTLKEEWIAY--ICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSA 177
Query: 244 MGPSGDKTHVSTR--VMGTYGYCAPDYAMTGQ-----LTFKSDIYSFGVVLLELITG 293
D+T V R +GT + AP+ + FKSD++S G+ +E+ G
Sbjct: 178 ---QLDRT-VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 20/200 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G FG+V+ G +V A+K L G V+ F E + + H LV+L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKV-AVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 159 EGDQRLLVYEYMPLGSLDKHLHD------LRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
+ + ++ E+M GSL L L P + +A + G+ Y+
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKL--------IDFSAQIAEGMAYIE--- 126
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTG 272
++ I+RDL+ +N+L+ E K++DFGLA++ + T + AP+ G
Sbjct: 127 RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFG 185
Query: 273 QLTFKSDIYSFGVVLLELIT 292
T KS+++SFG++L E++T
Sbjct: 186 CFTIKSNVWSFGILLYEIVT 205
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F V + AIK L+ R + V + E + DHP
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL +C + D++L Y G L K++ + D A L+Y
Sbjct: 98 FFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 152
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 153 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 209
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
SD+++ G ++ +L+ G
Sbjct: 210 LLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 90/201 (44%), Gaps = 14/201 (6%)
Query: 99 LGEGGFGKVYKGCLEKIE---QVVAIKQLDHRGV---QGVREFSAEVMTLGSADHPNLVK 152
LG+G FG V +G + VA+K L + + + +F EV + S DH NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
L G ++ V E PLGSL L LR T + A + G+ YL +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 131
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYCAPDYAMT 271
I+RDL N+LL K+ DFGL + P D V + +CAP+ T
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 272 GQLTFKSDIYSFGVVLLELIT 292
+ SD + FGV L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 100/220 (45%), Gaps = 16/220 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F LG+G FGKV + E++ AIK L V V E L D P
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 149 NLVKLIGYCAEGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
+ + C + RL V EY+ G L H+ + P + AA S GL +
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEP----QAVFYAAEISIGLFF 135
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTR-VMGTYGYCAP 266
LH K+ +IYRDLK N++L+ H K++DFG+ K V+TR GT Y AP
Sbjct: 136 LH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMMDGVTTREFCGTPDYIAP 189
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+ D +++GV+L E++ G+ D +D EL
Sbjct: 190 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD-GEDEDEL 228
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 99 LGEGGFGKVYKGC---LEKIEQV--VAIKQLDHRGVQGVREFSAEVMTLGS--ADHPNLV 151
LG G FGKV + L K + V VA+K L +E + + S H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIA--AGASRGLQYLH 209
L+G C G L++ EY G L L+ LR +R L+ + IA ++R L +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDL---LNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170
Query: 210 EQLKQPV--------IYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTY 261
Q+ Q + I+RD+ N+LL G+ K+ DFGLA+ + V
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 262 GYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++S+G++L E+ +
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 90/201 (44%), Gaps = 14/201 (6%)
Query: 99 LGEGGFGKVYKGCLEKIE---QVVAIKQLDHRGV---QGVREFSAEVMTLGSADHPNLVK 152
LG+G FG V +G + VA+K L + + + +F EV + S DH NL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
L G ++ V E PLGSL L LR T + A + G+ YL +
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSL---LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 141
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT-YGYCAPDYAMT 271
I+RDL N+LL K+ DFGL + P D V + +CAP+ T
Sbjct: 142 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 272 GQLTFKSDIYSFGVVLLELIT 292
+ SD + FGV L E+ T
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 113/228 (49%), Gaps = 26/228 (11%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEK-IEQVVAIKQLDHRGV---QG-VREFSAEVMT--LGS 144
+F +G GGFG+VY GC + ++ A+K LD + + QG + +M + +
Sbjct: 190 DFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 145 ADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGAS 202
D P +V + D+ + + M G L HL H + + + R AA
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRF-YAAEII 302
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
GL+++H + V+YRDLK +NILL+E H ++SD GLA S K H S +GT+G
Sbjct: 303 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHG 355
Query: 263 YCAPDYAMTG-QLTFKSDIYSFGVVLLELITGRKAIDQ--TKDRKELN 307
Y AP+ G +D +S G +L +L+ G Q TKD+ E++
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID 403
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 113/228 (49%), Gaps = 26/228 (11%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEK-IEQVVAIKQLDHRGV---QG-VREFSAEVMT--LGS 144
+F +G GGFG+VY GC + ++ A+K LD + + QG + +M + +
Sbjct: 190 DFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 145 ADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGAS 202
D P +V + D+ + + M G L HL H + + + R AA
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRF-YAAEII 302
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
GL+++H + V+YRDLK +NILL+E H ++SD GLA S K H S +GT+G
Sbjct: 303 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHG 355
Query: 263 YCAPDYAMTG-QLTFKSDIYSFGVVLLELITGRKAIDQ--TKDRKELN 307
Y AP+ G +D +S G +L +L+ G Q TKD+ E++
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID 403
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 113/228 (49%), Gaps = 26/228 (11%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEK-IEQVVAIKQLDHRGV---QG-VREFSAEVMT--LGS 144
+F +G GGFG+VY GC + ++ A+K LD + + QG + +M + +
Sbjct: 189 DFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 145 ADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGAS 202
D P +V + D+ + + M G L HL H + + + R AA
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRF-YAAEII 301
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
GL+++H + V+YRDLK +NILL+E H ++SD GLA S K H S +GT+G
Sbjct: 302 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHG 354
Query: 263 YCAPDYAMTG-QLTFKSDIYSFGVVLLELITGRKAIDQ--TKDRKELN 307
Y AP+ G +D +S G +L +L+ G Q TKD+ E++
Sbjct: 355 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID 402
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 113/228 (49%), Gaps = 26/228 (11%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEK-IEQVVAIKQLDHRGV---QG-VREFSAEVMT--LGS 144
+F +G GGFG+VY GC + ++ A+K LD + + QG + +M + +
Sbjct: 190 DFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 145 ADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGAS 202
D P +V + D+ + + M G L HL H + + + R AA
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRF-YAAEII 302
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
GL+++H + V+YRDLK +NILL+E H ++SD GLA S K H S +GT+G
Sbjct: 303 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHG 355
Query: 263 YCAPDYAMTG-QLTFKSDIYSFGVVLLELITGRKAIDQ--TKDRKELN 307
Y AP+ G +D +S G +L +L+ G Q TKD+ E++
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID 403
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-----VVAIKQLDHR-GVQGVREFSAEVMTLGSADHPNLVK 152
LG G FG+VY+G + + VA+K L Q +F E + + +H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRP-DTRP--LDWNTRMKIAAGASRGLQYLH 209
IG + R ++ E M G L L + RP ++P L + +A + G QYL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 210 EQLKQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
E I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ M G T K+D +SFGV+L E+ +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-----VVAIKQLDHR-GVQGVREFSAEVMTLGSADHPNLVK 152
LG G FG+VY+G + + VA+K L Q +F E + + +H N+V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRP-DTRP--LDWNTRMKIAAGASRGLQYLH 209
IG + R ++ E M G L L + RP ++P L + +A + G QYL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 210 EQLKQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
E I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 185 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ M G T K+D +SFGV+L E+ +
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-----VVAIKQLDHR-GVQGVREFSAEVMTLGSADHPNLVK 152
LG G FG+VY+G + + VA+K L Q +F E + + +H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRP-DTRP--LDWNTRMKIAAGASRGLQYLH 209
IG + R ++ E M G L L + RP ++P L + +A + G QYL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 210 EQLKQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
E I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ M G T K+D +SFGV+L E+ +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-----VVAIKQLDHR-GVQGVREFSAEVMTLGSADHPNLVK 152
LG G FG+VY+G + + VA+K L Q +F E + + +H N+V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRP-DTRP--LDWNTRMKIAAGASRGLQYLH 209
IG + R ++ E M G L L + RP ++P L + +A + G QYL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 210 EQLKQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
E I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 165 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ M G T K+D +SFGV+L E+ +
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-----VVAIKQLDHR-GVQGVREFSAEVMTLGSADHPNLVK 152
LG G FG+VY+G + + VA+K L Q +F E + + +H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRP-DTRP--LDWNTRMKIAAGASRGLQYLH 209
IG + R ++ E M G L L + RP ++P L + +A + G QYL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 210 EQLKQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
E I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ M G T K+D +SFGV+L E+ +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-----VVAIKQLDHR-GVQGVREFSAEVMTLGSADHPNLVK 152
LG G FG+VY+G + + VA+K L Q +F E + + +H N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRP-DTRP--LDWNTRMKIAAGASRGLQYLH 209
IG + R ++ E M G L L + RP ++P L + +A + G QYL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 210 EQLKQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
E I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ M G T K+D +SFGV+L E+ +
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-----VVAIKQLDHR-GVQGVREFSAEVMTLGSADHPNLVK 152
LG G FG+VY+G + + VA+K L Q +F E + + +H N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRP-DTRP--LDWNTRMKIAAGASRGLQYLH 209
IG + R ++ E M G L L + RP ++P L + +A + G QYL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 210 EQLKQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
E I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ M G T K+D +SFGV+L E+ +
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-----VAIKQLDHRGVQGVRE--FSAEVMTLGSADHPNLV 151
LG G FGKV I + VA+K L + RE S M H N+V
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRP-------------------DTRPLDWN 192
L+G C L++EY G L +L R D L +
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 193 TRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTH 252
+ A ++G+++L + ++RDL N+L+ G K+ DFGLA+ S
Sbjct: 173 DLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 253 VSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
V + AP+ G T KSD++S+G++L E+ +
Sbjct: 230 VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 12/213 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G+G G VY Q VAI+Q++ + E++ + +PN+V +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
GD+ +V EY+ GSL + + D +IAA LQ L VI+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMD--------EGQIAAVCRECLQALEFLHSNQVIH 140
Query: 219 RDLKCSNILLEEGYHPKLSDFGL-AKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFK 277
R++K NILL KL+DFG A++ P K + ++GT + AP+ K
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTRKAYGPK 197
Query: 278 SDIYSFGVVLLELITGRKAIDQTKDRKELNLVA 310
DI+S G++ +E+I G + L L+A
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 230
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-----VVAIKQLDHR-GVQGVREFSAEVMTLGSADHPNLVK 152
LG G FG+VY+G + + VA+K L Q +F E + + +H N+V+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRP-DTRP--LDWNTRMKIAAGASRGLQYLH 209
IG + R ++ E M G L L + RP ++P L + +A + G QYL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 210 EQLKQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
E I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 175 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ M G T K+D +SFGV+L E+ +
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-----VVAIKQLDHR-GVQGVREFSAEVMTLGSADHPNLVK 152
LG G FG+VY+G + + VA+K L Q +F E + + +H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRP-DTRP--LDWNTRMKIAAGASRGLQYLH 209
IG + R ++ E M G L L + RP ++P L + +A + G QYL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 210 EQLKQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
E I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ M G T K+D +SFGV+L E+ +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 13/213 (6%)
Query: 98 CLGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGY 156
LG G FG+V+K C E + +A K + RG++ E E+ + DH NL++L
Sbjct: 96 ILGGGRFGQVHK-CEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
+ +LV EY+ G L + D + LD MK G++++H+ +
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK---QICEGIRHMHQMY---I 208
Query: 217 IYRDLKCSNILL--EEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
++ DLK NIL + K+ DFGLA+ +K V+ GT + AP+ +
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLAPEVVNYDFV 265
Query: 275 TFKSDIYSFGVVLLELITGRKAIDQTKDRKELN 307
+F +D++S GV+ L++G D + LN
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLN 298
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-----VVAIKQLDH-RGVQGVREFSAEVMTLGSADHPNLVK 152
LG G FG+VY+G + + VA+K L Q +F E + + +H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRP-DTRP--LDWNTRMKIAAGASRGLQYLH 209
IG + R ++ E M G L L + RP ++P L + +A + G QYL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 210 EQLKQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
E I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ M G T K+D +SFGV+L E+ +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-----VVAIKQLDHR-GVQGVREFSAEVMTLGSADHPNLVK 152
LG G FG+VY+G + + VA+K L Q +F E + + +H N+V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRP-DTRP--LDWNTRMKIAAGASRGLQYLH 209
IG + R ++ E M G L L + RP ++P L + +A + G QYL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 210 EQLKQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
E I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 150 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ M G T K+D +SFGV+L E+ +
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-----VVAIKQLDHR-GVQGVREFSAEVMTLGSADHPNLVK 152
LG G FG+VY+G + + VA+K L Q +F E + + +H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRP-DTRP--LDWNTRMKIAAGASRGLQYLH 209
IG + R ++ E M G L L + RP ++P L + +A + G QYL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 210 EQLKQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
E I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ M G T K+D +SFGV+L E+ +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 110/221 (49%), Gaps = 14/221 (6%)
Query: 95 SDCCLGEGGFGKVYKGC--LEKIEQVVAIKQLDHRGVQG-VREFSAEVMTLGSADHPNLV 151
+D LG G FG V +G + K + VAIK L + E E + D+P +V
Sbjct: 340 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
+LIG C + + +LV E G L K L R + + + ++ S G++YL E+
Sbjct: 400 RLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREE---IPVSNVAELLHQVSMGMKYLEEK 455
Query: 212 LKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG--YCAPDYA 269
++R+L N+LL ++ K+SDFGL+K D ++ + R G + + AP+
Sbjct: 456 ---NFVHRNLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAPECI 511
Query: 270 MTGQLTFKSDIYSFGVVLLELIT-GRKAIDQTKDRKELNLV 309
+ + +SD++S+GV + E ++ G+K + K + + +
Sbjct: 512 NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI 552
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 99 LGEGGFGKVYKGC---LEKIEQV--VAIKQLDHRGVQGVREFSAEVMTLGS--ADHPNLV 151
LG G FGKV + L K + V VA+K L +E + + S H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG--ASRGLQYLH 209
L+G C G L++ EY G L L+ LR +R L+ + IA ++R L +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDL---LNFLRRKSRVLETDPAFAIANSTLSTRDLLHFS 170
Query: 210 EQLKQPV--------IYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTY 261
Q+ Q + I+RD+ N+LL G+ K+ DFGLA+ + V
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 262 GYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++S+G++L E+ +
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-----VVAIKQLDHR-GVQGVREFSAEVMTLGSADHPNLVK 152
LG G FG+VY+G + + VA+K L Q +F E + + +H N+V+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRP-DTRP--LDWNTRMKIAAGASRGLQYLH 209
IG + R ++ E M G L L + RP ++P L + +A + G QYL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 210 EQLKQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
E I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 176 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ M G T K+D +SFGV+L E+ +
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 97/222 (43%), Gaps = 33/222 (14%)
Query: 102 GGFGKVYKGCLEKIEQVVAIKQL---DHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
G FG V+K L + VA+K D + Q RE + + H NL++ I
Sbjct: 26 GRFGCVWKAQL--MNDFVAVKIFPLQDKQSWQSERE----IFSTPGMKHENLLQFIAAEK 79
Query: 159 EGD----QRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL-- 212
G + L+ + GSL +L + WN +A SRGL YLHE +
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDYL-----KGNIITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 213 ------KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
K + +RD K N+LL+ L+DFGLA G + +GT Y AP
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 267 DYAMTGQLTFKS------DIYSFGVVLLELITGRKAIDQTKD 302
+ + G + F+ D+Y+ G+VL EL++ KA D D
Sbjct: 195 E-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVD 235
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 100/225 (44%), Gaps = 32/225 (14%)
Query: 102 GGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCAEGD 161
G FG V+K L + + VA+K + Q + EV +L H N+++ IG G
Sbjct: 35 GRFGCVWKAQL--LNEYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRGT 91
Query: 162 Q----RLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL----- 212
L+ + GSL L + WN IA +RGL YLHE +
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 213 --KQPVIYRDLKCSNILLEEGYHPKLSDFGLA---KMGPSGDKTHVSTRVMGTYGYCAPD 267
K + +RD+K N+LL+ ++DFGLA + G S TH +GT Y AP+
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ---VGTRRYMAPE 203
Query: 268 YAMTGQLTFKS------DIYSFGVVLLELITGRKAIDQTKDRKEL 306
+ G + F+ D+Y+ G+VL EL + A D D L
Sbjct: 204 -VLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML 247
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-----VVAIKQLDHR-GVQGVREFSAEVMTLGSADHPNLVK 152
LG G FG+VY+G + + VA+K L Q +F E + + +H N+V+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRP-DTRP--LDWNTRMKIAAGASRGLQYLH 209
IG + R ++ E M G L L + RP ++P L + +A + G QYL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 210 EQLKQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
E I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 199 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELIT 292
+ M G T K+D +SFGV+L E+ +
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 8/203 (3%)
Query: 91 GNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL---DHRGVQGVREFSAEVMTLGSADH 147
NFR + +G G F +VY+ VA+K++ D + + E+ L +H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 148 PNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
PN++K E ++ +V E G L + + + R + T K L++
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+H + V++RD+K +N+ + KL D GL + S KT + ++GT Y +P+
Sbjct: 152 MHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS--KTTAAHSLVGTPYYMSPE 206
Query: 268 YAMTGQLTFKSDIYSFGVVLLEL 290
FKSDI+S G +L E+
Sbjct: 207 RIHENGYNFKSDIWSLGCLLYEM 229
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQ--LDHR--GVQGV-REFSAEVMTLGSADHPNLVKL 153
LGEG F VYK + Q+VAIK+ L HR G+ R E+ L HPN++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
+ LV+++M L+ + D P M + +GL+YLH+
Sbjct: 78 LDAFGHKSNISLVFDFME-TDLEVIIKDNSLVLTPSHIKAYMLMTL---QGLEYLHQHW- 132
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+++RDLK +N+LL+E KL+DFGLAK S ++ + V T Y AP+ +
Sbjct: 133 --ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--TRWYRAPELLFGAR 188
Query: 274 LT-FKSDIYSFGVVLLELI 291
+ D+++ G +L EL+
Sbjct: 189 MYGVGVDMWAVGCILAELL 207
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-------VVAIKQL-DHRGVQGVREFSAEV-MTLGSADHPN 149
LGEG FG+V I++ VA+K L D + + + +E+ M H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ EY G+L ++L RP ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+RG++YL Q I+RDL N+L+ E K++DFGLA+ + D +T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-------VVAIKQL-DHRGVQGVREFSAEV-MTLGSADHPN 149
LGEG FG+V I++ VA+K L D + + + +E+ M H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ EY G+L ++L RP ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+RG++YL Q I+RDL N+L+ E K++DFGLA+ + D +T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 12/205 (5%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQ-GVREFSAEVMTLGSADHPNLVKLIGY 156
+G G V ++ VAIK+++ Q + E E+ + HPN+V
Sbjct: 22 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 81
Query: 157 CAEGDQRLLVYEYMPLGS-LDKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
D+ LV + + GS LD H + + LD +T I GL+YLH
Sbjct: 82 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH--- 138
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGL-AKMGPSGDKTHVSTR--VMGTYGYCAPDYA 269
K I+RD+K NILL E +++DFG+ A + GD T R +GT + AP+
Sbjct: 139 KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 198
Query: 270 -MTGQLTFKSDIYSFGVVLLELITG 293
FK+DI+SFG+ +EL TG
Sbjct: 199 EQVRGYDFKADIWSFGITAIELATG 223
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 95/226 (42%), Gaps = 21/226 (9%)
Query: 73 NSGKSAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGV 132
N G S+ P A +F +G+G FGKV + E A+K L + +
Sbjct: 26 NLGPSSNP------HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKK 79
Query: 133 RE----FSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP 188
+E S + L + HP LV L D+ V +Y+ G L HL R P
Sbjct: 80 KEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEP 139
Query: 189 LDWNTRMKI-AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPS 247
R + AA + L YLH ++YRDLK NILL+ H L+DFGL K
Sbjct: 140 -----RARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191
Query: 248 GDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
+ T ++ GT Y AP+ D + G VL E++ G
Sbjct: 192 HNST--TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-------VVAIKQL-DHRGVQGVREFSAEV-MTLGSADHPN 149
LGEG FG+V I++ VA+K L D + + + +E+ M H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ EY G+L ++L RP ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+RG++YL Q I+RDL N+L+ E K++DFGLA+ + D +T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 12/205 (5%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQ-GVREFSAEVMTLGSADHPNLVKLIGY 156
+G G V ++ VAIK+++ Q + E E+ + HPN+V
Sbjct: 17 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 76
Query: 157 CAEGDQRLLVYEYMPLGS-LDKHLHDL---RPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
D+ LV + + GS LD H + + LD +T I GL+YLH
Sbjct: 77 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH--- 133
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGL-AKMGPSGDKTHVSTR--VMGTYGYCAPDYA 269
K I+RD+K NILL E +++DFG+ A + GD T R +GT + AP+
Sbjct: 134 KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 193
Query: 270 -MTGQLTFKSDIYSFGVVLLELITG 293
FK+DI+SFG+ +EL TG
Sbjct: 194 EQVRGYDFKADIWSFGITAIELATG 218
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-------VVAIKQL-DHRGVQGVREFSAEV-MTLGSADHPN 149
LGEG FG+V I++ VA+K L D + + + +E+ M H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ EY G+L ++L RP ++ +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+RG++YL Q I+RDL N+L+ E K++DFGLA+ + D +T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQV--VAIKQLDHRGVQ-GVREFSAEV-MTLGSADHPN 149
LGEG FG+V +K +V VA+K L + + + +E+ M H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ EY G+L ++L RP +N +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
A +RG++YL + I+RDL N+L+ E K++DFGLA+ D H+
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDXXK 207
Query: 258 MGTYG-----YCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
T G + AP+ T +SD++SFGV+L E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-------VVAIKQL-DHRGVQGVREFSAEV-MTLGSADHPN 149
LGEG FG+V I++ VA+K L D + + + +E+ M H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ EY G+L ++L RP ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+RG++YL Q I+RDL N+L+ E K++DFGLA+ + D +T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-------VVAIKQL-DHRGVQGVREFSAEV-MTLGSADHPN 149
LGEG FG+V I++ VA+K L D + + + +E+ M H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ EY G+L ++L RP ++ +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+RG++YL Q I+RDL N+L+ E K++DFGLA+ + D +T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 109/247 (44%), Gaps = 37/247 (14%)
Query: 93 FRSDC-----CLGEGGFGKVYKGCLEKIE-----QVVAIKQLDH----RGVQGVREFSAE 138
R +C LG+GG+GKV++ + K+ ++ A+K L R + AE
Sbjct: 14 IRPECFELLRVLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 139 VMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIA 198
L HP +V LI G + L+ EY+ G L L R D T
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE--REGIFMED--TACFYL 127
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRV 257
A S L +LH++ +IYRDLK NI+L H KL+DFGL K G TH
Sbjct: 128 AEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT---F 181
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG---------RKAIDQTKDRKELNL 308
GT Y AP+ M D +S G ++ +++TG +K ID+ K LNL
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK-LNL 240
Query: 309 VAWLLRK 315
+L ++
Sbjct: 241 PPYLTQE 247
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 109/246 (44%), Gaps = 35/246 (14%)
Query: 93 FRSDC-----CLGEGGFGKVYKGCLEKIE-----QVVAIKQLDH----RGVQGVREFSAE 138
R +C LG+GG+GKV++ + K+ ++ A+K L R + AE
Sbjct: 14 IRPECFELLRVLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 139 VMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIA 198
L HP +V LI G + L+ EY+ G L L R D T
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE--REGIFMED--TACFYL 127
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM 258
A S L +LH++ +IYRDLK NI+L H KL+DFGL K S V+
Sbjct: 128 AEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFC 182
Query: 259 GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG---------RKAIDQTKDRKELNLV 309
GT Y AP+ M D +S G ++ +++TG +K ID+ K LNL
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK-LNLP 241
Query: 310 AWLLRK 315
+L ++
Sbjct: 242 PYLTQE 247
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDH---RGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG GG +V+ ++ + VA+K L R F E + +HP +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 155 GY----CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G +V EY+ +L +H P+ +++ A A + L + H+
Sbjct: 79 ATGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQ 134
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK-MGPSGDKTHVSTRVMGTYGYCAPDYA 269
+I+RD+K +NI++ K+ DFG+A+ + SG+ + V+GT Y +P+ A
Sbjct: 135 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 270 MTGQLTFKSDIYSFGVVLLELITG 293
+ +SD+YS G VL E++TG
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F V + AIK L+ R + V + E + DHP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL + + D++L Y G L K++ + D A L+Y
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 148 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
+ SD+++ G ++ +L+ G
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F V + AIK L+ R + V + E + DHP
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL + + D++L Y G L K++ + D A L+Y
Sbjct: 68 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 122
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 123 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 179
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
SD+++ G ++ +L+ G
Sbjct: 180 LLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F V + AIK L+ R + V + E + DHP
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL + + D++L Y G L K++ + D A L+Y
Sbjct: 69 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 123
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 124 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 180
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
SD+++ G ++ +L+ G
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 13/218 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA-EVMTLGSADHPNLVKLIGYC 157
LGEG + VYKG + + +VA+K++ +G + EV L H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 158 AEGDQRLLVYEYMPLGSLDKHLHDLRPDT-RPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
LV+EY LDK L D ++ + RGL Y H +Q V
Sbjct: 70 HTEKSLTLVFEY-----LDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKV 121
Query: 217 IYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM-TGQLT 275
++RDLK N+L+ E KL+DFGLA+ KT+ + V T Y PD + + +
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGSTDYS 179
Query: 276 FKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
+ D++ G + E+ TGR + ++L+ + +L
Sbjct: 180 TQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRIL 217
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F V + AIK L+ R + V + E + DHP
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL + + D++L Y G L K++ + D A L+Y
Sbjct: 70 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 124
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 125 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 181
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
SD+++ G ++ +L+ G
Sbjct: 182 LLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F V + AIK L+ R + V + E + DHP
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL + + D++L Y G L K++ + D A L+Y
Sbjct: 71 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 125
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 126 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 182
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
SD+++ G ++ +L+ G
Sbjct: 183 LLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDH---RGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG GG +V+ ++ + VA+K L R F E + +HP +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 155 ----GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G +V EY+ +L +H P+ +++ A A + L + H+
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQ 134
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK-MGPSGDKTHVSTRVMGTYGYCAPDYA 269
+I+RD+K +NI++ K+ DFG+A+ + SG+ + V+GT Y +P+ A
Sbjct: 135 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 270 MTGQLTFKSDIYSFGVVLLELITG 293
+ +SD+YS G VL E++TG
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F V + AIK L+ R + V + E + DHP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL + + D++L Y G L K++ + D A L+Y
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 148 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
SD+++ G ++ +L+ G
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F V + AIK L+ R + V + E + DHP
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL + + D++L Y G L K++ + D A L+Y
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 145
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 146 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
SD+++ G ++ +L+ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 97 CCLGEGGFGKVYKGCLEKI-EQVVAIKQLDHRGVQG--VREFSAEVMTLGSADHPNLVKL 153
C LG+G FG+V K C ++I +Q A+K ++ + EV L DHPN++KL
Sbjct: 28 CMLGKGSFGEVLK-CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
+ +V E G L D + + +I G+ Y+H K
Sbjct: 87 FEILEDSSSFYIVGELYTGG----ELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---K 139
Query: 214 QPVIYRDLKCSNILLEEGYHP---KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+++RDLK NILLE K+ DFGL+ T + R+ GT Y AP+ +
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYIAPE-VL 195
Query: 271 TGQLTFKSDIYSFGVVLLELITG 293
G K D++S GV+L L++G
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSG 218
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F V + AIK L+ R + V + E + DHP
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL + + D++L Y G L K++ + D A L+Y
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 145
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 146 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
SD+++ G ++ +L+ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F V + AIK L+ R + V + E + DHP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL + + D++L Y G L K++ + D A L+Y
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 148 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
SD+++ G ++ +L+ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-------VVAIKQL-DHRGVQGVREFSAEV-MTLGSADHPN 149
LGEG FG+V I++ VA+K L D + + + +E+ M H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ EY G+L ++L RP ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+RG++YL Q I+RDL N+L+ E +++DFGLA+ + D +T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F V + AIK L+ R + V + E + DHP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL + + D++L Y G L K++ + D A L+Y
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 148 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
SD+++ G ++ +L+ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F V + AIK L+ R + V + E + DHP
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL + + D++L Y G L K++ + D A L+Y
Sbjct: 75 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 129
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 130 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
SD+++ G ++ +L+ G
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F V + AIK L+ R + V + E + DHP
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL + + D++L Y G L K++ + D A L+Y
Sbjct: 94 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 148
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 149 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
SD+++ G ++ +L+ G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F V + AIK L+ R + V + E + DHP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL + + D++L Y G L K++ + D A L+Y
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 148 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
SD+++ G ++ +L+ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F V + AIK L+ R + V + E + DHP
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL + + D++L Y G L K++ + D A L+Y
Sbjct: 94 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 148
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 149 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
SD+++ G ++ +L+ G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-------VVAIKQL-DHRGVQGVREFSAEV-MTLGSADHPN 149
LGEG FG+V I++ VA+K L D + + + +E+ M H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ EY G+L ++L RP ++ +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+RG++YL Q I+RDL N+L+ E K++DFGLA+ + D +T
Sbjct: 150 TYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV++ E+ T
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-------VVAIKQL-DHRGVQGVREFSAEV-MTLGSADHPN 149
LGEG FG+V I++ VA+K L D + + + +E+ M H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ EY G+L ++L RP ++ +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+RG++YL Q I+RDL N+L+ E K++DFGLA+ + D +T
Sbjct: 152 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV++ E+ T
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-------VVAIKQL-DHRGVQGVREFSAEV-MTLGSADHPN 149
LGEG FG+V I++ VA+K L D + + + +E+ M H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ EY G+L ++L RP ++ +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+RG++YL Q I+RDL N+L+ E K++DFGLA+ + D +T
Sbjct: 155 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV++ E+ T
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F V + AIK L+ R + V + E + DHP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL + + D++L Y G L K++ + D A L+Y
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 148 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
SD+++ G ++ +L+ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDH---RGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG GG +V+ ++ + VA+K L R F E + +HP +V +
Sbjct: 36 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 95
Query: 155 ----GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G +V EY+ +L +H P+ +++ A A + L + H+
Sbjct: 96 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQ 151
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK-MGPSGDKTHVSTRVMGTYGYCAPDYA 269
+I+RD+K +NI++ K+ DFG+A+ + SG+ + V+GT Y +P+ A
Sbjct: 152 N---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 208
Query: 270 MTGQLTFKSDIYSFGVVLLELITG 293
+ +SD+YS G VL E++TG
Sbjct: 209 RGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F V + AIK L+ R + V + E + DHP
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL + + D++L Y G L K++ + D A L+Y
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 145
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 146 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
SD+++ G ++ +L+ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 92/211 (43%), Gaps = 13/211 (6%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSA-DH 147
NF LG+G FGKV +++ + A+K L + V E L A +H
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 148 PNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
P L +L D+ V E++ G L H+ +R D AA L +
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK----SRRFDEARARFYAAEIISALMF 139
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH++ +IYRDLK N+LL+ H KL+DFG+ K G T + GT Y AP+
Sbjct: 140 LHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPDYIAPE 194
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
D ++ GV+L E++ G +
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F V + AIK L+ R + V + E + DHP
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL + + D++L Y G L K++ + D A L+Y
Sbjct: 90 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 144
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 145 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
SD+++ G ++ +L+ G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F V + AIK L+ R + V + E + DHP
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL + + D++L Y G L K++ + D A L+Y
Sbjct: 90 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 144
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 145 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
SD+++ G ++ +L+ G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 16/210 (7%)
Query: 99 LGEGGFGKVYKGC---LEKIEQV--VAIKQLDHRGVQGVREFSAEVMTLGS--ADHPNLV 151
LG G FGKV + L K + V VA+K L +E + + S H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG-ASRGLQYLHE 210
L+G C G L++ EY G L L RP +N +SR L +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 211 QLKQPV--------IYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
Q+ Q + I+RD+ N+LL G+ K+ DFGLA+ + V
Sbjct: 174 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 233
Query: 263 YCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++S+G++L E+ +
Sbjct: 234 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-------VVAIKQL-DHRGVQGVREFSAEV-MTLGSADHPN 149
LGEG FG+V I++ VA+K L D + + + +E+ M H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ EY G+L ++L RP ++ +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+RG++YL Q I+RDL N+L+ E K++DFGLA+ + D +T
Sbjct: 209 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV++ E+ T
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F V + AIK L+ R + V + E + DHP
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL + + D++L Y G L K++ + D A L+Y
Sbjct: 96 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 150
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 151 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
SD+++ G ++ +L+ G
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDH---RGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG GG +V+ + + VA+K L R F E + +HP +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 155 ----GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G +V EY+ +L +H P+ +++ A A + L + H+
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQ 134
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK-MGPSGDKTHVSTRVMGTYGYCAPDYA 269
+I+RD+K +NIL+ K+ DFG+A+ + SG+ + V+GT Y +P+ A
Sbjct: 135 NG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQA 191
Query: 270 MTGQLTFKSDIYSFGVVLLELITG 293
+ +SD+YS G VL E++TG
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 29/220 (13%)
Query: 99 LGEGGFGKVYKGC---LEKIEQV--VAIKQLDHRGVQGVREFSAEVMTLGS--ADHPNLV 151
LG G FGKV + L K + V VA+K L +E + + S H N+V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLH---------DLRP----------DTRPLDWN 192
L+G C G L++ EY G L L L P D RPL+
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 193 TRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTH 252
+ ++ ++G+ +L + I+RD+ N+LL G+ K+ DFGLA+ +
Sbjct: 159 DLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 253 VSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
V + AP+ T +SD++S+G++L E+ +
Sbjct: 216 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQV--VAIKQLDHRGVQ-GVREFSAEV-MTLGSADHPN 149
LGEG FG+V +K +V VA+K L + + + +E+ M H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ EY G+L ++L RP +N +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
A +RG++YL + I+RDL N+L+ E K++DFGLA+ D H+
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 196
Query: 258 MGTYG-----YCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
T G + AP+ T +SD++SFGV+L E+ T
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQV--VAIKQLDHRGVQ-GVREFSAEV-MTLGSADHPN 149
LGEG FG+V +K +V VA+K L + + + +E+ M H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ EY G+L ++L RP +N +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
A +RG++YL + I+RDL N+L+ E K++DFGLA+ D H+
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 199
Query: 258 MGTYG-----YCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
T G + AP+ T +SD++SFGV+L E+ T
Sbjct: 200 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQV--VAIKQLDHRGVQ-GVREFSAEV-MTLGSADHPN 149
LGEG FG+V +K +V VA+K L + + + +E+ M H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ EY G+L ++L RP +N +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
A +RG++YL + I+RDL N+L+ E K++DFGLA+ D H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 258 MGTYG-----YCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
T G + AP+ T +SD++SFGV+L E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQV--VAIKQLDHRGVQ-GVREFSAEV-MTLGSADHPN 149
LGEG FG+V +K +V VA+K L + + + +E+ M H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ EY G+L ++L RP +N +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
A +RG++YL + I+RDL N+L+ E K++DFGLA+ D H+
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 200
Query: 258 MGTYG-----YCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
T G + AP+ T +SD++SFGV+L E+ T
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 88 AATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHR-----GVQGVREFSAEVMTL 142
A GN++ LGEG FGKV Q VA+K ++ + +QG E+ L
Sbjct: 11 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYL 68
Query: 143 GSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGAS 202
HP+++KL D+ ++V EY L D + +
Sbjct: 69 RLLRHPHIIKLYDVIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRFFQQII 123
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
++Y H + +++RDLK N+LL+E + K++DFGL+ + G+ S G+
Sbjct: 124 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPN 177
Query: 263 YCAPDYAMTGQLTF--KSDIYSFGVVLLELITGRKAID 298
Y AP+ ++G+L + D++S GV+L ++ R D
Sbjct: 178 YAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 88 AATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHR-----GVQGVREFSAEVMTL 142
A GN++ LGEG FGKV Q VA+K ++ + +QG E+ L
Sbjct: 10 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYL 67
Query: 143 GSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGAS 202
HP+++KL D+ ++V EY L D + +
Sbjct: 68 RLLRHPHIIKLYDVIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRFFQQII 122
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
++Y H + +++RDLK N+LL+E + K++DFGL+ + G+ S G+
Sbjct: 123 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPN 176
Query: 263 YCAPDYAMTGQLTF--KSDIYSFGVVLLELITGRKAID 298
Y AP+ ++G+L + D++S GV+L ++ R D
Sbjct: 177 YAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQV--VAIKQLDHRGVQ-GVREFSAEV-MTLGSADHPN 149
LGEG FG+V +K +V VA+K L + + + +E+ M H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ EY G+L ++L RP +N +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
A +RG++YL + I+RDL N+L+ E K++DFGLA+ D H+
Sbjct: 197 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 248
Query: 258 MGTYG-----YCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
T G + AP+ T +SD++SFGV+L E+ T
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 88 AATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHR-----GVQGVREFSAEVMTL 142
A GN++ LGEG FGKV Q VA+K ++ + +QG E+ L
Sbjct: 1 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYL 58
Query: 143 GSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGAS 202
HP+++KL D+ ++V EY L D + +
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRFFQQII 113
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
++Y H + +++RDLK N+LL+E + K++DFGL+ + G+ S G+
Sbjct: 114 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPN 167
Query: 263 YCAPDYAMTGQLTF--KSDIYSFGVVLLELITGRKAID 298
Y AP+ ++G+L + D++S GV+L ++ R D
Sbjct: 168 YAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 23/228 (10%)
Query: 78 AKPFTFDELAAAT-GNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVR 133
+ P FDE +F +G+G FGKV +++ A+K ++ + VR
Sbjct: 1 SMPPVFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVR 60
Query: 134 EFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHD---LRPDTRPLD 190
E+ + +HP LV L + + +V + + G L HL + +T L
Sbjct: 61 NVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL- 119
Query: 191 WNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDK 250
L YL Q +I+RD+K NILL+E H ++DF +A M P +
Sbjct: 120 ------FICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--E 168
Query: 251 THVSTRVMGTYGYCAPDYAMTGQ---LTFKSDIYSFGVVLLELITGRK 295
T ++T + GT Y AP+ + + +F D +S GV EL+ GR+
Sbjct: 169 TQITT-MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 24/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-------VVAIKQL-DHRGVQGVREFSAEV-MTLGSADHPN 149
LGEG FG+V I++ VA+K L D + + + +E+ M H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ Y G+L ++L RP ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+RG++YL Q I+RDL N+L+ E K++DFGLA+ + D +T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 88 AATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHR-----GVQGVREFSAEVMTL 142
A GN++ LGEG FGKV Q VA+K ++ + +QG E+ L
Sbjct: 5 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYL 62
Query: 143 GSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGAS 202
HP+++KL D+ ++V EY L D + +
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRFFQQII 117
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
++Y H + +++RDLK N+LL+E + K++DFGL+ + G+ S G+
Sbjct: 118 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPN 171
Query: 263 YCAPDYAMTGQLTF--KSDIYSFGVVLLELITGRKAID 298
Y AP+ ++G+L + D++S GV+L ++ R D
Sbjct: 172 YAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 16/221 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQ-GVR-EFSAEVMTLGSADHPN 149
+F LG G G V K + ++ ++L H ++ +R + E+ L + P
Sbjct: 17 DFERISELGAGNGGVVTK-VQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLH 209
+V G + + E+M GSLD+ L + + + K++ RGL YL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKE----AKRIPEEILGKVSIAVLRGLAYLR 131
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT-HVSTRVMGTYGYCAPDY 268
E K +++RD+K SNIL+ KL DFG+ SG ++ +GT Y AP+
Sbjct: 132 E--KHQIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMAPER 184
Query: 269 AMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
+ +SDI+S G+ L+EL GR I D KEL +
Sbjct: 185 LQGTHYSVQSDIWSMGLSLVELAVGRYPI-PPPDAKELEAI 224
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDH---RGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG GG +V+ + + VA+K L R F E + +HP +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 155 ----GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G +V EY+ +L +H P+ +++ A A + L + H+
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQ 134
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK-MGPSGDKTHVSTRVMGTYGYCAPDYA 269
+I+RD+K +NI++ K+ DFG+A+ + SG+ + V+GT Y +P+ A
Sbjct: 135 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 270 MTGQLTFKSDIYSFGVVLLELITG 293
+ +SD+YS G VL E++TG
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 12/206 (5%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F+ LGEG F + AIK L+ R + V + E + DHP
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 149 NLVKLIGYCAEGDQRLLV-YEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
VKL + + D++L Y G L K++ + D A L+Y
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 145
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
LH + +I+RDLK NILL E H +++DFG AK+ K + +GT Y +P+
Sbjct: 146 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
SD+++ G ++ +L+ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDH---RGVQGVREFSAEVMTLGSADHPNLVKLI 154
LG GG +V+ + + VA+K L R F E + +HP +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 155 ----GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
G +V EY+ +L +H P+ +++ A A + L + H+
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQ 134
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK-MGPSGDKTHVSTRVMGTYGYCAPDYA 269
+I+RD+K +NI++ K+ DFG+A+ + SG+ + V+GT Y +P+ A
Sbjct: 135 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 270 MTGQLTFKSDIYSFGVVLLELITG 293
+ +SD+YS G VL E++TG
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSADHPNLVK 152
+GEG +G VYK + ++VA+K++ + G+ +RE S L HPN+V
Sbjct: 29 VGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREIS----LLKELHHPNIVS 83
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAA-GASRGLQYLHEQ 211
LI LV+E+M +K L + + + ++++KI RG+ + H+
Sbjct: 84 LIDVIHSERCLTLVFEFM-----EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 212 LKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM- 270
+++RDLK N+L+ KL+DFGLA+ G T + T Y APD M
Sbjct: 139 R---ILHRDLKPQNLLINSDGALKLADFGLARA--FGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 271 TGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+ + + DI+S G + E+ITG+ D +L
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL 229
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 99 LGEGGFGK--VYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGY 156
+GEG FGK + K + + V+ + + E EV L + HPN+V+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHD----LRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
E +V +Y G L K ++ L + + LDW ++ +A L+++H++
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------LKHVHDR- 144
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTG 272
+++RD+K NI L + +L DFG+A++ S ++ +GT Y +P+
Sbjct: 145 --KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS--TVELARACIGTPYYLSPEICENK 200
Query: 273 QLTFKSDIYSFGVVLLELITGRKAID 298
KSDI++ G VL EL T + A +
Sbjct: 201 PYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQV--VAIKQLDHRGVQ-GVREFSAEV-MTLGSADHPN 149
LGEG FG+V +K +V VA+K L + + + +E+ M H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ EY G+L ++L RP +N +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
A +RG++YL + I+RDL N+L+ E K++DFGLA+ D H+
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 192
Query: 258 MGTYG-----YCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
T G + AP+ T +SD++SFGV+L E+ T
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 16/221 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQ-GVR-EFSAEVMTLGSADHPN 149
+F LG G G V+K K +V ++L H ++ +R + E+ L + P
Sbjct: 69 DFEKISELGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLH 209
+V G + + E+M GSLD+ L + K++ +GL YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLR 183
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT-HVSTRVMGTYGYCAPDY 268
E+ K +++RD+K SNIL+ KL DFG+ SG ++ +GT Y +P+
Sbjct: 184 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPER 236
Query: 269 AMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
+ +SDI+S G+ L+E+ GR I D KEL L+
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIP-PPDAKELELM 276
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSADHPNLVK 152
+GEG +G VYK + ++VA+K++ + G+ +RE S L HPN+V
Sbjct: 29 VGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREIS----LLKELHHPNIVS 83
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAA-GASRGLQYLHEQ 211
LI LV+E+M +K L + + + ++++KI RG+ + H+
Sbjct: 84 LIDVIHSERCLTLVFEFM-----EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 212 LKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM- 270
+++RDLK N+L+ KL+DFGLA+ G T + T Y APD M
Sbjct: 139 R---ILHRDLKPQNLLINSDGALKLADFGLARA--FGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 271 TGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+ + + DI+S G + E+ITG+ D +L
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL 229
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQ-GVR-EFSAEVMTLGSADHPN 149
+F LG G G V+K K +V ++L H ++ +R + E+ L + P
Sbjct: 34 DFEKISELGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLH 209
+V G + + E+M GSLD+ L + K++ +GL YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLR 148
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
E K +++RD+K SNIL+ KL DFG++ G D ++ +GT Y +P+
Sbjct: 149 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERL 202
Query: 270 MTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
+ +SDI+S G+ L+E+ GR I D KEL L+
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGRYPIP-PPDAKELELM 241
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 24/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQ-------VVAIKQL-DHRGVQGVREFSAEV-MTLGSADHPN 149
LGEG FG+V I++ VA+K L D + + + +E+ M H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ Y G+L ++L RP ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+RG++YL Q I+RDL N+L+ E K++DFGLA+ + D +T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQV--VAIKQLDHRGVQ-GVREFSAEV-MTLGSADHPN 149
LGEG FG+V +K +V VA+K L + + + +E+ M H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ EY G+L ++L RP +N +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
A +RG++YL + I+RDL N+L+ E K++DFGLA+ D H+
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 258 MGTYG-----YCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
T G + AP+ T +SD++SFGV+L E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 87 AAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLG 143
A F LG G FG+V + A+K LD + V ++E E L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQ 96
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
+ + P LVKL + +V EY P G + HL + + P + R AA
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GT 260
+YLH +IYRDLK N+++++ + K++DFGLAK V R GT
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGLAK--------RVKGRTWXLCGT 201
Query: 261 YGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y AP+ ++ D ++ GV++ E+ G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 12/196 (6%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+GEG G V + + VA+K++D R Q EV+ + H N+V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
GD+ +V E++ G+L D+ TR ++ + R L YLH Q VI+
Sbjct: 113 VGDELWVVMEFLEGGALT----DIVTHTR-MNEEQIATVCLSVLRALSYLH---NQGVIH 164
Query: 219 RDLKCSNILLEEGYHPKLSDFGL-AKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFK 277
RD+K +ILL KLSDFG A++ K ++GT + AP+ +
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK---RKXLVGTPYWMAPEVISRLPYGTE 221
Query: 278 SDIYSFGVVLLELITG 293
DI+S G++++E+I G
Sbjct: 222 VDIWSLGIMVIEMIDG 237
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+GEG G V + ++VA+K++D R Q EV+ + H N+V++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM---KIAAGASRGLQYLHEQLKQP 215
GD+ +V E++ G+L + +TRM +IAA LQ L Q
Sbjct: 219 VGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 267
Query: 216 VIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLT 275
VI+RD+K +ILL KLSDFG + ++GT + AP+
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELISRLPYG 325
Query: 276 FKSDIYSFGVVLLELITG 293
+ DI+S G++++E++ G
Sbjct: 326 PEVDIWSLGIMVIEMVDG 343
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 10/202 (4%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV-QGVREFSAEVMTLGSADHPNLVKLIGYC 157
+G GGF KV C ++VAIK +D + + E+ L + H ++ +L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 158 AEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVI 217
++ +V EY P G L ++ R + TR+ S + Y+H Q
Sbjct: 78 ETANKIFMVLEYCPGGELFDYI---ISQDRLSEEETRVVFRQIVS-AVAYVHSQ---GYA 130
Query: 218 YRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM-TGQLTF 276
+RDLK N+L +E + KL DFGL P G+K + G+ Y AP+ L
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGS 189
Query: 277 KSDIYSFGVVLLELITGRKAID 298
++D++S G++L L+ G D
Sbjct: 190 EADVWSMGILLYVLMCGFLPFD 211
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 37/221 (16%)
Query: 87 AAATGNFRSDCCLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREF 135
A F +G G FG+V Y + ++VV +KQ++H
Sbjct: 37 TAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------- 88
Query: 136 SAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM 195
E L + + P LVKL + +V EYMP G + HL + + P + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP---HARF 145
Query: 196 KIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST 255
AA +YLH +IYRDLK N+L+++ + K++DFG AK V
Sbjct: 146 -YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKG 193
Query: 256 RVM---GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
R GT Y AP+ ++ D ++ GV++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+GEG G V + ++VA+K++D R Q EV+ + H N+V++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
GD+ +V E++ G+L D+ TR +IAA LQ L Q VI+
Sbjct: 88 VGDELWVVMEFLEGGALT----DIVTHTR----MNEEQIAAVCLAVLQALSVLHAQGVIH 139
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RD+K +ILL KLSDFG + ++GT + AP+ +
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 279 DIYSFGVVLLELITG 293
DI+S G++++E++ G
Sbjct: 198 DIWSLGIMVIEMVDG 212
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 37/221 (16%)
Query: 87 AAATGNFRSDCCLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREF 135
A F +G G FG+V Y + ++VV +KQ++H
Sbjct: 37 TAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------- 88
Query: 136 SAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM 195
E L + + P LVKL + +V EYMP G + HL + + P + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP---HARF 145
Query: 196 KIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST 255
AA +YLH +IYRDLK N+L+++ + K++DFG AK V
Sbjct: 146 -YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKG 193
Query: 256 RVM---GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
R GT Y AP+ ++ D ++ GV++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 97 CCLGEGGFGKVYKGCLEKI-EQVVAIKQLDHRGVQG--VREFSAEVMTLGSADHPNLVKL 153
C LG+G FG+V K C ++I +Q A+K ++ + EV L DHPN++KL
Sbjct: 28 CMLGKGSFGEVLK-CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
+ +V E G L D + + +I G+ Y+H K
Sbjct: 87 FEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMH---K 139
Query: 214 QPVIYRDLKCSNILLEEGYHP---KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+++RDLK NILLE K+ DFGL+ T + R+ GT Y AP+ +
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYIAPE-VL 195
Query: 271 TGQLTFKSDIYSFGVVLLELITG 293
G K D++S GV+L L++G
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 97 CCLGEGGFGKVYKGCLEKI-EQVVAIKQLDHRGVQG--VREFSAEVMTLGSADHPNLVKL 153
C LG+G FG+V K C ++I +Q A+K ++ + EV L DHPN++KL
Sbjct: 28 CMLGKGSFGEVLK-CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
+ +V E G L D + + +I G+ Y+H K
Sbjct: 87 FEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMH---K 139
Query: 214 QPVIYRDLKCSNILLEEGYHP---KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
+++RDLK NILLE K+ DFGL+ T + R+ GT Y AP+ +
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYIAPE-VL 195
Query: 271 TGQLTFKSDIYSFGVVLLELITG 293
G K D++S GV+L L++G
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSG 218
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+GEG G V + ++VA+K++D R Q EV+ + H N+V++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
GD+ +V E++ G+L D+ TR +IAA LQ L Q VI+
Sbjct: 97 VGDELWVVMEFLEGGALT----DIVTHTR----MNEEQIAAVCLAVLQALSVLHAQGVIH 148
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RD+K +ILL KLSDFG + ++GT + AP+ +
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 279 DIYSFGVVLLELITG 293
DI+S G++++E++ G
Sbjct: 207 DIWSLGIMVIEMVDG 221
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+GEG G V + ++VA+K++D R Q EV+ + H N+V++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
GD+ +V E++ G+L D+ TR +IAA LQ L Q VI+
Sbjct: 92 VGDELWVVMEFLEGGALT----DIVTHTR----MNEEQIAAVCLAVLQALSVLHAQGVIH 143
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RD+K +ILL KLSDFG + ++GT + AP+ +
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 279 DIYSFGVVLLELITG 293
DI+S G++++E++ G
Sbjct: 202 DIWSLGIMVIEMVDG 216
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+GEG G V + ++VA+K++D R Q EV+ + H N+V++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
GD+ +V E++ G+L D+ TR +IAA LQ L Q VI+
Sbjct: 99 VGDELWVVMEFLEGGALT----DIVTHTR----MNEEQIAAVCLAVLQALSVLHAQGVIH 150
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RD+K +ILL KLSDFG + ++GT + AP+ +
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 279 DIYSFGVVLLELITG 293
DI+S G++++E++ G
Sbjct: 209 DIWSLGIMVIEMVDG 223
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 16/221 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQ-GVR-EFSAEVMTLGSADHPN 149
+F LG G G V+K K +V ++L H ++ +R + E+ L + P
Sbjct: 7 DFEKISELGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLH 209
+V G + + E+M GSLD+ L + K++ +GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLR 121
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT-HVSTRVMGTYGYCAPDY 268
E K +++RD+K SNIL+ KL DFG+ SG ++ +GT Y +P+
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPER 174
Query: 269 AMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
+ +SDI+S G+ L+E+ GR I D KEL L+
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI-PPPDAKELELM 214
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 13/211 (6%)
Query: 91 GNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQ--GVREFSAEVMTLGSADHP 148
GN+R +G+G F KV + VA+K +D + +++ EV + +HP
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 149 NLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYL 208
N+VKL LV EY G + +L R + R K S +QY
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFRQIVS-AVQYC 130
Query: 209 HEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY 268
H++ +++RDLK N+LL+ + K++DFG + G+K G+ Y AP+
Sbjct: 131 HQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAAPEL 184
Query: 269 AMTGQLT-FKSDIYSFGVVLLELITGRKAID 298
+ + D++S GV+L L++G D
Sbjct: 185 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 16/221 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQ-GVR-EFSAEVMTLGSADHPN 149
+F LG G G V+K K +V ++L H ++ +R + E+ L + P
Sbjct: 7 DFEKISELGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLH 209
+V G + + E+M GSLD+ L + K++ +GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLR 121
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT-HVSTRVMGTYGYCAPDY 268
E K +++RD+K SNIL+ KL DFG+ SG ++ +GT Y +P+
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPER 174
Query: 269 AMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
+ +SDI+S G+ L+E+ GR I D KEL L+
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI-PPPDAKELELM 214
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 16/221 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQ-GVR-EFSAEVMTLGSADHPN 149
+F LG G G V+K K +V ++L H ++ +R + E+ L + P
Sbjct: 7 DFEKISELGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLH 209
+V G + + E+M GSLD+ L + K++ +GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLR 121
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT-HVSTRVMGTYGYCAPDY 268
E K +++RD+K SNIL+ KL DFG+ SG ++ +GT Y +P+
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPER 174
Query: 269 AMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
+ +SDI+S G+ L+E+ GR I D KEL L+
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI-PPPDAKELELM 214
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 16/221 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQ-GVR-EFSAEVMTLGSADHPN 149
+F LG G G V+K K +V ++L H ++ +R + E+ L + P
Sbjct: 7 DFEKISELGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLH 209
+V G + + E+M GSLD+ L + K++ +GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLR 121
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT-HVSTRVMGTYGYCAPDY 268
E K +++RD+K SNIL+ KL DFG+ SG ++ +GT Y +P+
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPER 174
Query: 269 AMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
+ +SDI+S G+ L+E+ GR I D KEL L+
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI-PPPDAKELELM 214
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQV--VAIKQLDHRGVQ-GVREFSAEV-MTLGSADHPN 149
LGEG FG+V +K +V VA+K L + + + +E+ M H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR------------MKI 197
++ L+G C + ++ EY G+L ++L P +N +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
A +RG++YL + I+RDL N+L+ E K++DFGLA+ D H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 258 MGTYG-----YCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
T G + AP+ T +SD++SFGV+L E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 16/214 (7%)
Query: 90 TGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSAD 146
G++ LG G FGKV G + VA+K L+ + ++ V + E+ L
Sbjct: 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQ 206
HP+++KL + +V EY+ G L ++ R + R ++ +
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK---HGRVEEMEAR-RLFQQILSAVD 125
Query: 207 YLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
Y H + V++RDLK N+LL+ + K++DFGL+ M G+ S G+ Y AP
Sbjct: 126 YCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAP 179
Query: 267 DYAMTGQLTF--KSDIYSFGVVLLELITGRKAID 298
+ ++G+L + DI+S GV+L L+ G D
Sbjct: 180 E-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVRE---FSAEVMTLGSADHPNLVKLIG 155
LG+GGF K Y+ ++V A K + + + S E+ S D+P++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLR-----PDTRPLDWNTRMKIAAGASRGLQYLHE 210
+ + D +V E SL + LH R P+ R + R I +G+QYLH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEAR---YFMRQTI-----QGVQYLHN 160
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLA-KMGPSGDKTHVSTRVMGTYGYCAPDYA 269
VI+RDLK N+ L + K+ DFGLA K+ G++ + GT Y AP+
Sbjct: 161 NR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT---LCGTPNYIAPEVL 214
Query: 270 MTGQLTFKSDIYSFGVVLLELITGRKAIDQT 300
+F+ DI+S G +L L+ G+ + +
Sbjct: 215 CKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVRE---FSAEVMTLGSADHPNLVKLIG 155
LG+GGF K Y+ ++V A K + + + S E+ S D+P++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLR-----PDTRPLDWNTRMKIAAGASRGLQYLHE 210
+ + D +V E SL + LH R P+ R + R I +G+QYLH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEAR---YFMRQTI-----QGVQYLHN 160
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLA-KMGPSGDKTHVSTRVMGTYGYCAPDYA 269
VI+RDLK N+ L + K+ DFGLA K+ G++ + GT Y AP+
Sbjct: 161 NR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPNYIAPEVL 214
Query: 270 MTGQLTFKSDIYSFGVVLLELITGRKAIDQT 300
+F+ DI+S G +L L+ G+ + +
Sbjct: 215 CKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 87 AAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL---------DHRGVQGVREFSA 137
+ AT + +G G +G VYK VA+K + + VRE A
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV-A 63
Query: 138 EVMTLGSADHPNLVKLIGYCAEG--DQRL---LVYEYMPLGSLDKHLHDLRPDTRPLDWN 192
+ L + +HPN+V+L+ CA D+ + LV+E++ L +L P P +
Sbjct: 64 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAE-- 120
Query: 193 TRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTH 252
T + RGL +LH +++RDLK NIL+ G KL+DFGLA++
Sbjct: 121 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQM 174
Query: 253 VSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELI 291
T V+ T Y AP+ + D++S G + E+
Sbjct: 175 ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL------DHRGVQGVREFSAEVMTL 142
AT + +G G +G VYK VA+K + + + VRE A + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREV-ALLRRL 60
Query: 143 GSADHPNLVKLIGYCAEG--DQRL---LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKI 197
+ +HPN+V+L+ CA D+ + LV+E++ L +L P P + T +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAE--TIKDL 117
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
RGL +LH +++RDLK NIL+ G KL+DFGLA++ V
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALAPV 171
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELI 291
+ T Y AP+ + D++S G + E+
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQVVAIKQLDHRGVQGVRE-FSAEVMTLGSADHPNLVK 152
LGEG FG+VY+G EKI VA+K +E F +E + + + DHP++VK
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKIN--VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
LIG E + ++ E P G L +L + + L T + + + + YL E +
Sbjct: 74 LIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYL-ESI 128
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTG 272
++RD+ NIL+ KL DFGL++ D S + + +P+
Sbjct: 129 N--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSPESINFR 185
Query: 273 QLTFKSDIYSFGVVLLELIT 292
+ T SD++ F V + E+++
Sbjct: 186 RFTTASDVWMFAVCMWEILS 205
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 15/197 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G FG V G K + VA+K + G EF E T+ HP LVK G C+
Sbjct: 16 LGSGQFGVVKLGKW-KGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+ +V EY+ G L L+ LR + L+ + +++ G+ +L I+
Sbjct: 74 KEYPIYIVTEYISNGCL---LNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIH 127
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT---YGYCAPDYAMTGQLT 275
RDL N L++ K+SDFG+ + D +VS+ +GT + AP+ + +
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRY--VLDDQYVSS--VGTKFPVKWSAPEVFHYFKYS 183
Query: 276 FKSDIYSFGVVLLELIT 292
KSD+++FG+++ E+ +
Sbjct: 184 SKSDVWAFGILMWEVFS 200
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 13/211 (6%)
Query: 91 GNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV--QGVREFSAEVMTLGSADHP 148
GN+R +G+G F KV + VA+K +D + +++ EV + +HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 149 NLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYL 208
N+VKL LV EY G + +L R + R K S +QY
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFRQIVS-AVQYC 129
Query: 209 HEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY 268
H++ +++RDLK N+LL+ + K++DFG + G+K G+ Y AP+
Sbjct: 130 HQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPEL 183
Query: 269 AMTGQLT-FKSDIYSFGVVLLELITGRKAID 298
+ + D++S GV+L L++G D
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 13/211 (6%)
Query: 91 GNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV--QGVREFSAEVMTLGSADHP 148
GN+R +G+G F KV + VA+K +D + +++ EV + +HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 149 NLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYL 208
N+VKL LV EY G + +L R + R K S +QY
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFRQIVS-AVQYC 129
Query: 209 HEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY 268
H++ +++RDLK N+LL+ + K++DFG + G+K G+ Y AP+
Sbjct: 130 HQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPEL 183
Query: 269 AMTGQLT-FKSDIYSFGVVLLELITGRKAID 298
+ + D++S GV+L L++G D
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+GEG G V + ++VA+K++D R Q EV+ + H N+V++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM---KIAAGASRGLQYLHEQLKQP 215
GD+ +V E++ G+L + +TRM +IAA LQ L Q
Sbjct: 142 VGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 190
Query: 216 VIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLT 275
VI+RD+K +ILL KLSDFG + ++GT + AP+
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELISRLPYG 248
Query: 276 FKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
+ DI+S G++++E++ G K + ++
Sbjct: 249 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 282
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQVVAIKQLDHRGVQGVRE-FSAEVMTLGSADHPNLVK 152
LGEG FG+VY+G EKI VA+K +E F +E + + + DHP++VK
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKIN--VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
LIG E + ++ E P G L +L + + L T + + + + YL E +
Sbjct: 78 LIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYL-ESI 132
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTG 272
++RD+ NIL+ KL DFGL++ D S + + +P+
Sbjct: 133 N--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSPESINFR 189
Query: 273 QLTFKSDIYSFGVVLLELIT 292
+ T SD++ F V + E+++
Sbjct: 190 RFTTASDVWMFAVCMWEILS 209
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 87 AAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLG 143
A F LG G FG+V ++ A+K LD + V +++ E L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
+ + P LVKL + +V EY+P G + HL + + P + R AA
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GT 260
+YLH +IYRDLK N+L+++ + +++DFG AK V R GT
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGT 201
Query: 261 YGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y AP+ ++ D ++ GV++ E+ G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHPNLVKLIG 155
LG+GGF K Y+ ++V A K + + + S E+ S D+P++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLR-----PDTRPLDWNTRMKIAAGASRGLQYLHE 210
+ + D +V E SL + LH R P+ R + R I +G+QYLH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEAR---YFMRQTI-----QGVQYLHN 160
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLA-KMGPSGDKTHVSTRVMGTYGYCAPDYA 269
VI+RDLK N+ L + K+ DFGLA K+ G++ + GT Y AP+
Sbjct: 161 NR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIAPEVL 214
Query: 270 MTGQLTFKSDIYSFGVVLLELITGRKAIDQT 300
+F+ DI+S G +L L+ G+ + +
Sbjct: 215 CKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 100/235 (42%), Gaps = 28/235 (11%)
Query: 72 NNSGKS---AKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIK-----Q 123
N+SG + FT D +F LG+G FG VY +K +VA+K Q
Sbjct: 8 NSSGTPDILTRHFTID-------DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQ 60
Query: 124 LDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLR 183
++ GV+ + E+ HPN+++L Y + + L+ EY P G L K L
Sbjct: 61 IEKEGVE--HQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQ--- 115
Query: 184 PDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK 243
+ D I + L Y H + VI+RD+K N+LL K++DFG +
Sbjct: 116 -KSCTFDEQRTATIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSV 171
Query: 244 MGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 298
PS + + GT Y P+ K D++ GV+ EL+ G +
Sbjct: 172 HAPSLRR----KTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 25/222 (11%)
Query: 98 CLGEGGFGKVYK------GCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
LG GGFG+V+ G L +++ + +G QG E L H +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKV-HSRFI 247
Query: 152 KLIGYCAEGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
+ Y E L LV M G + H++++ D + A GL++LH+
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ 307
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLA---KMGPSGDKTHVSTRVMGTYGYCAPD 267
+ +IYRDLK N+LL++ + ++SD GLA K G + K + GT G+ AP+
Sbjct: 308 R---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPE 359
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITGR---KAIDQTKDRKEL 306
+ + F D ++ GV L E+I R +A + + KEL
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 25/222 (11%)
Query: 98 CLGEGGFGKVYK------GCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
LG GGFG+V+ G L +++ + +G QG E L H +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKV-HSRFI 247
Query: 152 KLIGYCAEGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
+ Y E L LV M G + H++++ D + A GL++LH+
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ 307
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLA---KMGPSGDKTHVSTRVMGTYGYCAPD 267
+ +IYRDLK N+LL++ + ++SD GLA K G + K + GT G+ AP+
Sbjct: 308 R---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPE 359
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITGR---KAIDQTKDRKEL 306
+ + F D ++ GV L E+I R +A + + KEL
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 87 AAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLG 143
A F LG G FG+V ++ A+K LD + V +++ E L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
+ + P LVKL + +V EY+P G + HL + + P + R AA
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GT 260
+YLH +IYRDLK N+L+++ + +++DFG AK V R GT
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGT 201
Query: 261 YGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y AP+ ++ D ++ GV++ E+ G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 87 AAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLG 143
A F LG G FG+V ++ A+K LD + V +++ E L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
+ + P LVKL + +V EY+P G + HL + + P + R AA
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GT 260
+YLH +IYRDLK N+L+++ + +++DFG AK V R GT
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGT 201
Query: 261 YGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y AP+ ++ D ++ GV++ E+ G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 25/217 (11%)
Query: 91 GNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV--QGVREFSAEVMTLGSADHP 148
GN+R +G+G F KV + VA+K +D + +++ EV + +HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 149 NLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYL 208
N+VKL LV EY G + +L R + R K S +QY
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFRQIVS-AVQYC 129
Query: 209 HEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYC-APD 267
H++ +++RDLK N+LL+ + K++DFG + G+K +C AP
Sbjct: 130 HQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD---------AFCGAPP 177
Query: 268 YAMTGQLTFKS------DIYSFGVVLLELITGRKAID 298
YA K D++S GV+L L++G D
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 25/222 (11%)
Query: 98 CLGEGGFGKVYK------GCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
LG GGFG+V+ G L +++ + +G QG E L H +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKV-HSRFI 247
Query: 152 KLIGYCAEGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
+ Y E L LV M G + H++++ D + A GL++LH+
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ 307
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLA---KMGPSGDKTHVSTRVMGTYGYCAPD 267
+ +IYRDLK N+LL++ + ++SD GLA K G + K + GT G+ AP+
Sbjct: 308 R---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPE 359
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITGR---KAIDQTKDRKEL 306
+ + F D ++ GV L E+I R +A + + KEL
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 99 LGEGGFGKVYKGCL-----EKIEQVVAIKQLDHRGVQGVRE-FSAEVMTLGSADHPNLVK 152
LGEG FG+VY+G EKI VA+K +E F +E + + + DHP++VK
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKIN--VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 89
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
LIG E + ++ E P G L +L + + L T + + + + YL E +
Sbjct: 90 LIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYL-ESI 144
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTG 272
++RD+ NIL+ KL DFGL++ D S + + +P+
Sbjct: 145 N--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSPESINFR 201
Query: 273 QLTFKSDIYSFGVVLLELIT 292
+ T SD++ F V + E+++
Sbjct: 202 RFTTASDVWMFAVCMWEILS 221
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 103/241 (42%), Gaps = 24/241 (9%)
Query: 59 SMDVKNLNLKDDSNNSGKSAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQV 118
S DVK K + K P + A F LG G FG+V ++
Sbjct: 5 SSDVKEFLAKAKEDFLKKWESP---AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNH 61
Query: 119 VAIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSL 175
A+K LD + V +++ E L + + P LVKL + +V EY+P G +
Sbjct: 62 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 121
Query: 176 DKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPK 235
HL + + P + R AA +YLH +IYRDLK N+L+++ + +
Sbjct: 122 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQ 174
Query: 236 LSDFGLAKMGPSGDKTHVSTRVM---GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
++DFG AK V R GT Y AP+ ++ D ++ GV++ E+
Sbjct: 175 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 226
Query: 293 G 293
G
Sbjct: 227 G 227
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 87 AAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLG 143
A F LG G FG+V ++ A+K LD + V +++ E L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
+ + P LVKL + +V EY+P G + HL + + P + R AA
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 153
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GT 260
+YLH +IYRDLK N+L+++ + +++DFG AK V R GT
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGT 202
Query: 261 YGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y AP+ ++ D ++ GV++ E+ G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIK----QLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
LGEG FGKV K +Q VA+K QL + +R E+ L HP+++KL
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR-VEREISYLKLLRHPHIIKLY 75
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
++V EY L D + + + + + ++Y H +
Sbjct: 76 DVITTPTDIVMVIEYA-----GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH---RH 127
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+++RDLK N+LL++ + K++DFGL+ + G+ S G+ Y AP+ + G+L
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VINGKL 183
Query: 275 TF--KSDIYSFGVVLLELITGRKAID 298
+ D++S G+VL ++ GR D
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 87 AAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLG 143
A F LG G FG+V + A+K LD + V ++E E L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQ 96
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
+ + P LVKL + +V EY P G + HL + + P + R AA
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GT 260
+YLH +IYRDLK N+++++ + +++DFGLAK V R GT
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGLAK--------RVKGRTWXLCGT 201
Query: 261 YGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y AP+ ++ D ++ GV++ E+ G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 31/218 (14%)
Query: 87 AAATGNFRSDCCLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREF 135
A F LG G FG+V Y + ++VV +KQ++H
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------- 89
Query: 136 SAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM 195
E L + + P LVKL + +V EY+P G + HL + + P + R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF 146
Query: 196 KIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST 255
AA +YLH +IYRDLK N+L+++ + +++DFG AK T
Sbjct: 147 -YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT---- 198
Query: 256 RVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
+ GT Y AP+ ++ D ++ GV++ E+ G
Sbjct: 199 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHPNLVKLIG 155
LG+GGF K Y+ ++V A K + + + S E+ S D+P++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLR-----PDTRPLDWNTRMKIAAGASRGLQYLHE 210
+ + D +V E SL + LH R P+ R + R I +G+QYLH
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEAR---YFMRQTI-----QGVQYLHN 144
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLA-KMGPSGDKTHVSTRVMGTYGYCAPDYA 269
VI+RDLK N+ L + K+ DFGLA K+ G++ + GT Y AP+
Sbjct: 145 NR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIAPEVL 198
Query: 270 MTGQLTFKSDIYSFGVVLLELITGRKAIDQT 300
+F+ DI+S G +L L+ G+ + +
Sbjct: 199 CKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL------DHRGVQGVREFSAEVMTL 142
AT + +G G +G VYK VA+K + + + VRE A + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREV-ALLRRL 60
Query: 143 GSADHPNLVKLIGYCAEG--DQRL---LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKI 197
+ +HPN+V+L+ CA D+ + LV+E++ L +L P P + T +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAE--TIKDL 117
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
RGL +LH +++RDLK NIL+ G KL+DFGLA++ V
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALDPV 171
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELI 291
+ T Y AP+ + D++S G + E+
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 87 AAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLG 143
A F LG G FG+V ++ A+K LD + V +++ E L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
+ + P LVKL + +V EY+P G + HL + + P + R AA
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 153
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GT 260
+YLH +IYRDLK N+L+++ + +++DFG AK V R GT
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGT 202
Query: 261 YGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y AP+ ++ D ++ GV++ E+ G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 108/255 (42%), Gaps = 49/255 (19%)
Query: 90 TGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPN 149
+F LG+G FG+V K + AIK++ H + + +EVM L S +H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQY 63
Query: 150 LVKLIGYCAEGDQRLLV---------------YEYMPLGSLDKHLHDLRPDT-RPLDWNT 193
+V+ Y A ++R V EY G+L +H + R W
Sbjct: 64 VVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 194 RMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK---------- 243
+I L Y+H Q +I+RDLK NI ++E + K+ DFGLAK
Sbjct: 122 FRQIL----EALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 244 -----MGPSGDKTHVSTRVMGTYGYCAPDYA-MTGQLTFKSDIYSFGVVLLELI----TG 293
+ S D T +GT Y A + TG K D+YS G++ E+I TG
Sbjct: 175 LDSQNLPGSSDNL---TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTG 231
Query: 294 RKAIDQTKDRKELNL 308
+ ++ K + +++
Sbjct: 232 MERVNILKKLRSVSI 246
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 87 AAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLG 143
A F LG G FG+V ++ A+K LD + V +++ E L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
+ + P LVKL + +V EY+P G + HL + + P + R AA
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 153
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GT 260
+YLH +IYRDLK N+L+++ + +++DFG AK V R GT
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGT 202
Query: 261 YGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y AP+ ++ D ++ GV++ E+ G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 89 ATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL------DHRGVQGVREFSAEVMTL 142
AT + +G G +G VYK VA+K + + + VRE A + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREV-ALLRRL 60
Query: 143 GSADHPNLVKLIGYCAEG--DQRL---LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKI 197
+ +HPN+V+L+ CA D+ + LV+E++ L +L P P + T +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAE--TIKDL 117
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
RGL +LH +++RDLK NIL+ G KL+DFGLA++ V
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALFPV 171
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELI 291
+ T Y AP+ + D++S G + E+
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 31/218 (14%)
Query: 87 AAATGNFRSDCCLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREF 135
A F LG G FG+V Y + ++VV +KQ++H
Sbjct: 23 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------- 74
Query: 136 SAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM 195
E L + + P LVKL + +V EY+P G + HL + + P + R
Sbjct: 75 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF 131
Query: 196 KIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST 255
AA +YLH +IYRDLK N+L+++ + +++DFG AK T
Sbjct: 132 -YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT---- 183
Query: 256 RVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
+ GT Y AP+ ++ D ++ GV++ E+ G
Sbjct: 184 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 87 AAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLG 143
A F LG G FG+V ++ A+K LD + V +++ E L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
+ + P LVKL + +V EY P G + HL + + P + R AA
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 153
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GT 260
+YLH +IYRDLK N+++++ + K++DFG AK V R GT
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGT 202
Query: 261 YGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y AP+ ++ D ++ GV++ E+ G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 9/194 (4%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G FG V G + + VAIK + G EF E + + H LV+L G C
Sbjct: 32 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+ ++ EYM G L +L ++R + +++ ++YL + ++
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLH 143
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ + K+SDFGL++ ++T S + P+ M + + KS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETS-SVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 279 DIYSFGVVLLELIT 292
DI++FGV++ E+ +
Sbjct: 203 DIWAFGVLMWEIYS 216
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLGSADHPNLVKL 153
LG+G FG VY ++ + ++A+K QL+ GV+ + E+ HPN++++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRHPNILRM 80
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
Y + + L+ E+ P G L K +L+ R D + L Y HE+
Sbjct: 81 YNYFHDRKRIYLMLEFAPRGELYK---ELQKHGR-FDEQRSATFMEELADALHYCHER-- 134
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM-GTYGYCAPDYAMTG 272
VI+RD+K N+L+ K++DFG + PS + R M GT Y P+
Sbjct: 135 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGK 188
Query: 273 QLTFKSDIYSFGVVLLELITGRKAID 298
K D++ GV+ E + G D
Sbjct: 189 THDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 13/211 (6%)
Query: 91 GNFRSDCCLGEGGFGKV--YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHP 148
GN+R +G+G F KV + L E V I +++ EV + +HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 149 NLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYL 208
N+VKL LV EY G + +L R + R K S +QY
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFRQIVS-AVQYC 129
Query: 209 HEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY 268
H++ +++RDLK N+LL+ + K++DFG + G+K G+ Y AP+
Sbjct: 130 HQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPEL 183
Query: 269 AMTGQLT-FKSDIYSFGVVLLELITGRKAID 298
+ + D++S GV+L L++G D
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 25/221 (11%)
Query: 99 LGEGGFGKVYK------GCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVK 152
LG GGFG+V+ G L +++ + +G QG E L H +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKV-HSRFIV 248
Query: 153 LIGYCAEGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
+ Y E L LV M G + H++++ D + A GL++LH++
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 212 LKQPVIYRDLKCSNILLEEGYHPKLSDFGLA---KMGPSGDKTHVSTRVMGTYGYCAPDY 268
+IYRDLK N+LL++ + ++SD GLA K G + K + GT G+ AP+
Sbjct: 309 ---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPEL 360
Query: 269 AMTGQLTFKSDIYSFGVVLLELITGR---KAIDQTKDRKEL 306
+ + F D ++ GV L E+I R +A + + KEL
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 13/211 (6%)
Query: 91 GNFRSDCCLGEGGFGKV--YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHP 148
GN+R +G+G F KV + L E V I +++ EV + +HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 149 NLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYL 208
N+VKL LV EY G + +L R + R K S +QY
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFRQIVS-AVQYC 129
Query: 209 HEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY 268
H++ +++RDLK N+LL+ + K++DFG + G+K G+ Y AP+
Sbjct: 130 HQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DEFCGSPPYAAPEL 183
Query: 269 AMTGQLT-FKSDIYSFGVVLLELITGRKAID 298
+ + D++S GV+L L++G D
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLGSADHPNLVKL 153
LG+G FG VY ++ + ++A+K QL+ GV+ + E+ HPN++++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRHPNILRM 79
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
Y + + L+ E+ P G L K +L+ R D + L Y HE+
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYK---ELQKHGR-FDEQRSATFMEELADALHYCHER-- 133
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM-GTYGYCAPDYAMTG 272
VI+RD+K N+L+ K++DFG + PS + R M GT Y P+
Sbjct: 134 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGK 187
Query: 273 QLTFKSDIYSFGVVLLELITGRKAID 298
K D++ GV+ E + G D
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G FG V G + + VAIK + G EF E + + H LV+L G C
Sbjct: 17 LGTGQFGVVKYGKW-RGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+ ++ EYM G L +L ++R + +++ ++YL + ++
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLH 128
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTR-VMGTYGYCAPDYAMTGQLTFK 277
RDL N L+ + K+SDFGL++ D + S+R + P+ M + + K
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSK 186
Query: 278 SDIYSFGVVLLELIT 292
SDI++FGV++ E+ +
Sbjct: 187 SDIWAFGVLMWEIYS 201
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 87 AAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLG 143
A F LG G FG+V ++ A+K LD + V +++ E L
Sbjct: 58 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 117
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
+ + P LVKL + +V EY+P G + HL + + P + R AA
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 173
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GT 260
+YLH +IYRDLK N+L+++ + +++DFG AK V R GT
Sbjct: 174 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGT 222
Query: 261 YGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y AP+ ++ D ++ GV++ E+ G
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIK-----QLDHRGVQGVREFSAEVMTLGSADHPNLVKL 153
LG+G FG VY ++ + ++A+K QL+ GV+ + E+ HPN++++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRHPNILRM 79
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
Y + + L+ E+ P G L K +L+ R D + L Y HE+
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYK---ELQKHGR-FDEQRSATFMEELADALHYCHER-- 133
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM-GTYGYCAPDYAMTG 272
VI+RD+K N+L+ K++DFG + PS + R M GT Y P+
Sbjct: 134 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGK 187
Query: 273 QLTFKSDIYSFGVVLLELITGRKAID 298
K D++ GV+ E + G D
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 37/221 (16%)
Query: 87 AAATGNFRSDCCLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREF 135
A F +G G FG+V Y + ++VV +KQ++H
Sbjct: 37 TAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------- 88
Query: 136 SAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM 195
E L + + P LVKL + +V EY+P G + HL + + P + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF 145
Query: 196 KIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST 255
AA +YLH +IYRDLK N+L+++ + K++DFG AK V
Sbjct: 146 -YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKG 193
Query: 256 RVM---GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
R GT Y AP+ ++ D ++ GV++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 102/238 (42%), Gaps = 18/238 (7%)
Query: 59 SMDVKNLNLKDDSNNSGKSAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQV 118
S DVK K + K P + A F LG G FG+V ++
Sbjct: 5 SSDVKEFLAKAKEDFLKKWESP---AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNH 61
Query: 119 VAIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSL 175
A+K LD + V +++ E L + + P LVKL + +V EY+P G +
Sbjct: 62 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 121
Query: 176 DKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPK 235
HL + P + R AA +YLH +IYRDLK N+L+++ + +
Sbjct: 122 FSHLRRIGRFXEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQ 174
Query: 236 LSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
++DFG AK + + GT Y AP+ ++ D ++ GV++ E+ G
Sbjct: 175 VTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 90 TGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDH---RGVQGVREFSAEVMTLGSAD 146
G++ LG G FGKV G + VA+K L+ R + V + E+ L
Sbjct: 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQ 206
HP+++KL + +V EY+ G L ++ R + R ++ +
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK---HGRVEEMEAR-RLFQQILSAVD 125
Query: 207 YLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
Y H + V++RDLK N+LL+ + K++DFGL+ M G+ S G+ Y AP
Sbjct: 126 YCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAP 179
Query: 267 DYAMTGQLTF--KSDIYSFGVVLLELITGRKAID 298
+ ++G+L + DI+S GV+L L+ G D
Sbjct: 180 E-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 9/194 (4%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G FG V G + + VAIK + G EF E + + H LV+L G C
Sbjct: 16 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+ ++ EYM G L +L ++R + +++ ++YL + ++
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLH 127
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ + K+SDFGL++ + T S + P+ M + + KS
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 279 DIYSFGVVLLELIT 292
DI++FGV++ E+ +
Sbjct: 187 DIWAFGVLMWEIYS 200
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 25/217 (11%)
Query: 91 GNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV--QGVREFSAEVMTLGSADHP 148
GN+R +G+G F KV + VA+K +D + +++ EV +HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 149 NLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYL 208
N+VKL LV EY G + +L R + R K S +QY
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYL---VAHGRXKEKEARAKFRQIVS-AVQYC 129
Query: 209 HEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYC-APD 267
H++ +++RDLK N+LL+ + K++DFG + G+K +C AP
Sbjct: 130 HQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLD---------AFCGAPP 177
Query: 268 YAMTGQLTFKS------DIYSFGVVLLELITGRKAID 298
YA K D++S GV+L L++G D
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 9/194 (4%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G FG V G + + VAIK + G EF E + + H LV+L G C
Sbjct: 12 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+ ++ EYM G L +L ++R + +++ ++YL + ++
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLH 123
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ + K+SDFGL++ + T S + P+ M + + KS
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 279 DIYSFGVVLLELIT 292
DI++FGV++ E+ +
Sbjct: 183 DIWAFGVLMWEIYS 196
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 37/221 (16%)
Query: 87 AAATGNFRSDCCLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREF 135
A F LG G FG+V Y + ++VV +KQ++H
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------- 88
Query: 136 SAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM 195
E L + + P LVKL + +V EY+P G + HL + + P + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF 145
Query: 196 KIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST 255
AA +YLH +IYRDLK N+L+++ + +++DFG AK V
Sbjct: 146 -YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 256 RVM---GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
R GT Y AP+ ++ D ++ GV++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 62
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYMPLGSLD-KHLHDLRPDT---RPLDWNTRMKIAAGA 201
+HPN+VKL+ ++ LV+E++ S+D K D T PL + ++
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLL--- 116
Query: 202 SRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTY 261
+GL + H V++RDLK N+L+ KL+DFGLA+ +T+ V T
Sbjct: 117 -QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 170
Query: 262 GYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
Y AP+ + + + DI+S G + E++T R
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 37/221 (16%)
Query: 87 AAATGNFRSDCCLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREF 135
A F LG G FG+V Y + ++VV +KQ++H
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------- 88
Query: 136 SAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM 195
E L + + P LVKL + +V EY+P G + HL + + P + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF 145
Query: 196 KIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST 255
AA +YLH +IYRDLK N+L+++ + +++DFG AK V
Sbjct: 146 -YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 256 RVM---GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
R GT Y AP+ ++ D ++ GV++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 60
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYMPLGSLD-KHLHDLRPDT---RPLDWNTRMKIAAGA 201
+HPN+VKL+ ++ LV+E++ S+D K D T PL + ++
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLL--- 114
Query: 202 SRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTY 261
+GL + H V++RDLK N+L+ KL+DFGLA+ +T+ V T
Sbjct: 115 -QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 168
Query: 262 GYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
Y AP+ + + + DI+S G + E++T R
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 9/194 (4%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G FG V G + + VAIK + G EF E + + H LV+L G C
Sbjct: 17 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+ ++ EYM G L +L ++R + +++ ++YL + ++
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLH 128
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ + K+SDFGL++ + T S + P+ M + + KS
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 279 DIYSFGVVLLELIT 292
DI++FGV++ E+ +
Sbjct: 188 DIWAFGVLMWEIYS 201
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 37/221 (16%)
Query: 87 AAATGNFRSDCCLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREF 135
A F LG G FG+V Y + ++VV +KQ++H
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------- 89
Query: 136 SAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM 195
E L + + P LVKL + +V EY+P G + HL + + P + R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF 146
Query: 196 KIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST 255
AA +YLH +IYRDLK N+L+++ + +++DFG AK V
Sbjct: 147 -YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 194
Query: 256 RVM---GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
R GT Y AP+ ++ D ++ GV++ E+ G
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 86/200 (43%), Gaps = 14/200 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFS---AEVMTLGSADHPNLVKLIG 155
LG+G FGKV + + A+K L + E + E L + HP L L
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 77
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKI-AAGASRGLQYLHEQLKQ 214
D+ V EY G L HL R T R + A L+YLH +
Sbjct: 78 AFQTHDRLCFVMEYANGGELFFHLSRERVFT-----EERARFYGAEIVSALEYLH---SR 129
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
V+YRD+K N++L++ H K++DFGL K G S T GT Y AP+
Sbjct: 130 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDY 187
Query: 275 TFKSDIYSFGVVLLELITGR 294
D + GVV+ E++ GR
Sbjct: 188 GRAVDWWGLGVVMYEMMCGR 207
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 37/221 (16%)
Query: 87 AAATGNFRSDCCLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREF 135
A F LG G FG+V Y + ++VV +KQ++H
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------- 88
Query: 136 SAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM 195
E L + + P LVKL + +V EY+P G + HL + + P + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF 145
Query: 196 KIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST 255
AA +YLH +IYRDLK N+L+++ + +++DFG AK V
Sbjct: 146 -YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 256 RVM---GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
R GT Y AP+ ++ D ++ GV++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 87/200 (43%), Gaps = 14/200 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFS---AEVMTLGSADHPNLVKLIG 155
LG+G FGKV + + A+K L + E + E L + HP L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKI-AAGASRGLQYLHEQLKQ 214
D+ V EY G L HL R T R + A L+YLH +
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFT-----EERARFYGAEIVSALEYLH---SR 124
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
V+YRD+K N++L++ H K++DFGL K G S T + GT Y AP+
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDY 182
Query: 275 TFKSDIYSFGVVLLELITGR 294
D + GVV+ E++ GR
Sbjct: 183 GRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 86/200 (43%), Gaps = 14/200 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFS---AEVMTLGSADHPNLVKLIG 155
LG+G FGKV + + A+K L + E + E L + HP L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKI-AAGASRGLQYLHEQLKQ 214
D+ V EY G L HL R T R + A L+YLH +
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFT-----EERARFYGAEIVSALEYLH---SR 124
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
V+YRD+K N++L++ H K++DFGL K G S T GT Y AP+
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDY 182
Query: 275 TFKSDIYSFGVVLLELITGR 294
D + GVV+ E++ GR
Sbjct: 183 GRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 88/199 (44%), Gaps = 12/199 (6%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFS---AEVMTLGSADHPNLVKLIG 155
LG+G FGKV + + A+K L + E + E L + HP L L
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 75
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQP 215
D+ V EY G L HL R T + R A S L+YLH +
Sbjct: 76 AFQTHDRLCFVMEYANGGELFFHLSRERVFT---EERARFYGAEIVS-ALEYLH---SRD 128
Query: 216 VIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLT 275
V+YRD+K N++L++ H K++DFGL K G S T + GT Y AP+
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYG 186
Query: 276 FKSDIYSFGVVLLELITGR 294
D + GVV+ E++ GR
Sbjct: 187 RAVDWWGLGVVMYEMMCGR 205
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 37/221 (16%)
Query: 87 AAATGNFRSDCCLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREF 135
A F LG G FG+V Y + ++VV +KQ++H
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------- 88
Query: 136 SAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM 195
E L + + P LVKL + +V EY P G + HL + + P + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF 145
Query: 196 KIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST 255
AA +YLH +IYRDLK N+++++ + K++DFG AK V
Sbjct: 146 -YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKG 193
Query: 256 RVM---GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
R GT Y AP+ ++ D ++ GV++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 22/235 (9%)
Query: 84 DELAAATGNFRSDCCLGEGGFGKVYKGC-LEKIEQVVAIKQLD-HRGVQG-----VREFS 136
D L A + +GEG +GKV+K L+ + VA+K++ G +G +RE
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV- 62
Query: 137 AEVMTLGSADHPNLVKLIGYCA----EGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDW 191
A + L + +HPN+V+L C + + +L LV+E++ L +L + P +
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTE- 120
Query: 192 NTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT 251
T + RGL +LH V++RDLK NIL+ KL+DFGLA++
Sbjct: 121 -TIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQ 173
Query: 252 HVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
T V+ T Y AP+ + D++S G + E+ + + D +L
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL 228
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 91 GNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV--QGVREFSAEVMTLGSADHP 148
GN+R +G+G F KV + VA+K +D + +++ EV + +HP
Sbjct: 7 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 66
Query: 149 NLVKLIGYCAEGDQRLLVYEYMPLGSLDKHL--HDLRPDTRPLDWNTRMKIAAGASRGLQ 206
N+VKL LV EY G + +L H + R K S +Q
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEK-----EARAKFRQIVS-AVQ 120
Query: 207 YLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
Y H++ +++RDLK N+LL+ + K++DFG + G+K G+ Y AP
Sbjct: 121 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAP 174
Query: 267 DYAMTGQLT-FKSDIYSFGVVLLELITGRKAID 298
+ + + D++S GV+L L++G D
Sbjct: 175 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 91/215 (42%), Gaps = 24/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQGVRE-FSAEVMTLGS-ADHPNLV 151
LG G FGKV + + VA+K L RE +E+ L +H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLR-----PDTRP---------LDWNTRMKI 197
L+G C G L++ EY G L L R T P LD +
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+ ++G+ +L + I+RDL NILL G K+ DFGLA+ + V
Sbjct: 167 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ TF+SD++S+G+ L EL +
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 61
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYMPLGSLD-KHLHDLRPDT---RPLDWNTRMKIAAGA 201
+HPN+VKL+ ++ LV+E++ S+D K D T PL + ++
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLL--- 115
Query: 202 SRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTY 261
+GL + H V++RDLK N+L+ KL+DFGLA+ +T+ V T
Sbjct: 116 -QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 169
Query: 262 GYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
Y AP+ + + + DI+S G + E++T R
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 21/225 (9%)
Query: 78 AKPFTFDELAAA--TGNFRSDCCLGEGGFGKVYKGCLEKIE-QVVAIKQLDHRGVQGVRE 134
A P F + + A + ++ LG+G FG+V C +KI Q A+K + R V+ +
Sbjct: 11 ATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVIL-CKDKITGQECAVKVISKRQVKQKTD 69
Query: 135 FSA---EVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDW 191
+ EV L DHPN++KL + + LV E G L D +
Sbjct: 70 KESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGG----ELFDEIISRKRFSE 125
Query: 192 NTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSG 248
+I G+ Y+H K +++RDLK N+LLE + + ++ DFGL+ +
Sbjct: 126 VDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182
Query: 249 DKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
K +GT Y AP+ + G K D++S GV+L L++G
Sbjct: 183 KKMKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 62
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYMPLGSLD-KHLHDLRPDT---RPLDWNTRMKIAAGA 201
+HPN+VKL+ ++ LV+E++ S+D K D T PL + ++
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLL--- 116
Query: 202 SRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTY 261
+GL + H V++RDLK N+L+ KL+DFGLA+ +T+ V T
Sbjct: 117 -QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 170
Query: 262 GYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
Y AP+ + + + DI+S G + E++T R
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 59
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 113
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+ G
Sbjct: 114 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGV 155
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
T + T Y AP+ + + + DI+S G + E++T R
Sbjct: 156 PVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 88/199 (44%), Gaps = 12/199 (6%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFS---AEVMTLGSADHPNLVKLIG 155
LG+G FGKV + + A+K L + E + E L + HP L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQP 215
D+ V EY G L HL R T + R A S L+YLH +
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFT---EERARFYGAEIVS-ALEYLH---SRD 125
Query: 216 VIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLT 275
V+YRD+K N++L++ H K++DFGL K G S T + GT Y AP+
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYG 183
Query: 276 FKSDIYSFGVVLLELITGR 294
D + GVV+ E++ GR
Sbjct: 184 RAVDWWGLGVVMYEMMCGR 202
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 9/194 (4%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G FG V G + + VAIK + G EF E + + H LV+L G C
Sbjct: 23 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+ ++ EYM G L +L ++R + +++ ++YL + ++
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLH 134
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ + K+SDFGL++ + T S + P+ M + + KS
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 279 DIYSFGVVLLELIT 292
DI++FGV++ E+ +
Sbjct: 194 DIWAFGVLMWEIYS 207
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 91/215 (42%), Gaps = 24/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQGVRE-FSAEVMTLGS-ADHPNLV 151
LG G FGKV + + VA+K L RE +E+ L +H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLR-----PDTRP---------LDWNTRMKI 197
L+G C G L++ EY G L L R T P LD +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+ ++G+ +L + I+RDL NILL G K+ DFGLA+ + V
Sbjct: 174 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ TF+SD++S+G+ L EL +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 86/200 (43%), Gaps = 14/200 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFS---AEVMTLGSADHPNLVKLIG 155
LG+G FGKV + + A+K L + E + E L + HP L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKI-AAGASRGLQYLHEQLKQ 214
D+ V EY G L HL R T R + A L+YLH +
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFT-----EERARFYGAEIVSALEYLH---SR 124
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
V+YRD+K N++L++ H K++DFGL K G S T GT Y AP+
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDY 182
Query: 275 TFKSDIYSFGVVLLELITGR 294
D + GVV+ E++ GR
Sbjct: 183 GRAVDWWGLGVVMYEMMCGR 202
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 9/194 (4%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G FG V G + + VAIK + G EF E + + H LV+L G C
Sbjct: 32 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+ ++ EYM G L +L ++R + +++ ++YL + ++
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLH 143
Query: 219 RDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS 278
RDL N L+ + K+SDFGL++ + T S + P+ M + + KS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 279 DIYSFGVVLLELIT 292
DI++FGV++ E+ +
Sbjct: 203 DIWAFGVLMWEIYS 216
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 86/200 (43%), Gaps = 14/200 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFS---AEVMTLGSADHPNLVKLIG 155
LG+G FGKV + + A+K L + E + E L + HP L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKI-AAGASRGLQYLHEQLKQ 214
D+ V EY G L HL R T R + A L+YLH +
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFT-----EERARFYGAEIVSALEYLH---SR 124
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
V+YRD+K N++L++ H K++DFGL K G S T GT Y AP+
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDY 182
Query: 275 TFKSDIYSFGVVLLELITGR 294
D + GVV+ E++ GR
Sbjct: 183 GRAVDWWGLGVVMYEMMCGR 202
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLG----SADHPNLVKLI 154
+G G +G V K + Q++A+K++ R +E +M L S+D P +V+
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRI--RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFY 87
Query: 155 GYCAEGDQRLLVYEYMP--LGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
G + E M K+++ + D P + KI + L +L E L
Sbjct: 88 GALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEE--ILGKITLATVKALNHLKENL 145
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP---DYA 269
K +I+RD+K SNILL+ + KL DFG++ G D TR G Y AP D +
Sbjct: 146 K--IIHRDIKPSNILLDRSGNIKLCDFGIS--GQLVDSI-AKTRDAGCRPYMAPERIDPS 200
Query: 270 MTGQ-LTFKSDIYSFGVVLLELITGR 294
+ Q +SD++S G+ L EL TGR
Sbjct: 201 ASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 91/215 (42%), Gaps = 24/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQGVRE-FSAEVMTLGS-ADHPNLV 151
LG G FGKV + + VA+K L RE +E+ L +H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLR-----PDTRP---------LDWNTRMKI 197
L+G C G L++ EY G L L R T P LD +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+ ++G+ +L + I+RDL NILL G K+ DFGLA+ + V
Sbjct: 151 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ TF+SD++S+G+ L EL +
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 66
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 120
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+ G
Sbjct: 121 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGV 162
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
T + T Y AP+ + + + DI+S G + E++T R
Sbjct: 163 PVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 28/216 (12%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+F+ +G GGFG+V+K + IK++ + + RE A L DH N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKA----LAKLDHVNIV 67
Query: 152 KLIG------YCAEGDQR----------LLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM 195
G Y E + + E+ G+L++ + R + LD +
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE--KLDKVLAL 125
Query: 196 KIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST 255
++ ++G+ Y+H + +I RDLK SNI L + K+ DFGL + K
Sbjct: 126 ELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---RX 179
Query: 256 RVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELI 291
R GT Y +P+ + + D+Y+ G++L EL+
Sbjct: 180 RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 37/221 (16%)
Query: 87 AAATGNFRSDCCLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREF 135
A F LG G FG+V Y + ++VV +KQ++H
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------- 89
Query: 136 SAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM 195
E L + + P LVKL + +V EY+P G + HL + P + R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF 146
Query: 196 KIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST 255
AA +YLH +IYRDLK N+L+++ + +++DFG AK V
Sbjct: 147 -YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 194
Query: 256 RVM---GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
R GT Y AP+ ++ D ++ GV++ E+ G
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 100/221 (45%), Gaps = 41/221 (18%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 58
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGL 205
+HPN+VKL+ ++ LV+E H+H D T M +A L
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFE---------HVHQ--------DLKTFMDASALTGIPL 101
Query: 206 ----QYLHEQLK-------QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVS 254
YL + L+ V++RDLK N+L+ KL+DFGLA+ G
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTY 159
Query: 255 TRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
T + T Y AP+ + + + DI+S G + E++T R
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 37/221 (16%)
Query: 87 AAATGNFRSDCCLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREF 135
A F LG G FG+V Y + ++VV +KQ++H
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------- 88
Query: 136 SAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM 195
E L + + P LVKL + +V EY+P G + HL + P + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF 145
Query: 196 KIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST 255
AA +YLH +IYRDLK N+L+++ + +++DFG AK V
Sbjct: 146 -YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 256 RVM---GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
R GT Y AP+ ++ D ++ GV++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 37/221 (16%)
Query: 87 AAATGNFRSDCCLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREF 135
A F LG G FG+V Y + ++VV +KQ++H
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------- 88
Query: 136 SAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM 195
E L + + P LVKL + +V EY+P G + HL + P + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF 145
Query: 196 KIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST 255
AA +YLH +IYRDLK N+L+++ + +++DFG AK V
Sbjct: 146 -YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 256 RVM---GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
R GT Y AP+ ++ D ++ GV++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 59
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 113
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+ G
Sbjct: 114 -------------QGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGV 155
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
T + T Y AP+ + + + DI+S G + E++T R
Sbjct: 156 PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 22/235 (9%)
Query: 84 DELAAATGNFRSDCCLGEGGFGKVYKGC-LEKIEQVVAIKQLD-HRGVQG-----VREFS 136
D L A + +GEG +GKV+K L+ + VA+K++ G +G +RE
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV- 62
Query: 137 AEVMTLGSADHPNLVKLIGYCA----EGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDW 191
A + L + +HPN+V+L C + + +L LV+E++ L +L + P +
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTE- 120
Query: 192 NTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT 251
T + RGL +LH V++RDLK NIL+ KL+DFGLA++
Sbjct: 121 -TIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQ 173
Query: 252 HVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
T V+ T Y AP+ + D++S G + E+ + + D +L
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL 228
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 91/215 (42%), Gaps = 24/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQGVRE-FSAEVMTLGS-ADHPNLV 151
LG G FGKV + + VA+K L RE +E+ L +H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLR-----PDTRP---------LDWNTRMKI 197
L+G C G L++ EY G L L R T P LD +
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+ ++G+ +L + I+RDL NILL G K+ DFGLA+ + V
Sbjct: 169 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ TF+SD++S+G+ L EL +
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 34/209 (16%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA----------EVMTLGSADHP 148
LG G +G+V C +K+ V R ++ +R+ S EV L DHP
Sbjct: 45 LGSGAYGEVLL-CRDKVTHV-------ERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHP 96
Query: 149 NLVKLIGYCAEGDQRLLVYEYMPLGSL-DKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
N++KL + + LV E G L D+ +H R +D +K G+ Y
Sbjct: 97 NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH--RMKFNEVDAAVIIKQVLS---GVTY 151
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHP---KLSDFGLAKMGPSGDKTHVSTRVMGTYGYC 264
LH K +++RDLK N+LLE K+ DFGL+ + + K +GT Y
Sbjct: 152 LH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM---KERLGTAYYI 205
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELITG 293
AP+ + + K D++S GV+L L+ G
Sbjct: 206 APE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 59
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGL 205
+HPN+VKL+ ++ LV+E+ L + L D D L I + + L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKDFM-DASALTGIPLPLIKSYLFQLL 113
Query: 206 QYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCA 265
Q L V++RDLK N+L+ KL+DFGLA+ +T+ V T Y A
Sbjct: 114 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 171
Query: 266 PDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
P+ + + + DI+S G + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 27/201 (13%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
+G+G FG V Y+G VA+K + + + F AE + H NLV+L+
Sbjct: 29 IGKGEFGDVMLGDYRG------NKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLL 80
Query: 155 GYCAEGDQRL-LVYEYMPLGSLDKHLHDLRPDTRP-LDWNTRMKIAAGASRGLQYLHEQL 212
G E L +V EYM GSL +L R R L + +K + ++YL
Sbjct: 81 GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE--- 134
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSG-DKTHVSTRVMGTYGYCAPDYAMT 271
++RDL N+L+ E K+SDFGL K S D + + + AP+
Sbjct: 135 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALRE 188
Query: 272 GQLTFKSDIYSFGVVLLELIT 292
+ + KSD++SFG++L E+ +
Sbjct: 189 KKFSTKSDVWSFGILLWEIYS 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 25/200 (12%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
+G+G FG V Y+G VA+K + + + F AE + H NLV+L+
Sbjct: 14 IGKGEFGDVMLGDYRG------NKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLL 65
Query: 155 GYCAEGDQRL-LVYEYMPLGSLDKHLHDLRPDTRP-LDWNTRMKIAAGASRGLQYLHEQL 212
G E L +V EYM GSL +L R R L + +K + ++YL
Sbjct: 66 GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE--- 119
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTG 272
++RDL N+L+ E K+SDFGL K S T + AP+
Sbjct: 120 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREK 174
Query: 273 QLTFKSDIYSFGVVLLELIT 292
+ + KSD++SFG++L E+ +
Sbjct: 175 KFSTKSDVWSFGILLWEIYS 194
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 21/225 (9%)
Query: 78 AKPFTFDELAAA--TGNFRSDCCLGEGGFGKVYKGCLEKIE-QVVAIKQLDHRGVQGVRE 134
A P F + + A + ++ LG+G FG+V C +KI Q A+K + R V+ +
Sbjct: 34 ATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVIL-CKDKITGQECAVKVISKRQVKQKTD 92
Query: 135 FSA---EVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDW 191
+ EV L DHPN++KL + + LV E G L D +
Sbjct: 93 KESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGG----ELFDEIISRKRFSE 148
Query: 192 NTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSG 248
+I G+ Y+H K +++RDLK N+LLE + + ++ DFGL+ +
Sbjct: 149 VDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 205
Query: 249 DKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
K +GT Y AP+ + G K D++S GV+L L++G
Sbjct: 206 KKMKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 37/221 (16%)
Query: 87 AAATGNFRSDCCLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREF 135
A F LG G FG+V Y + ++VV +KQ++H
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------- 88
Query: 136 SAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM 195
E L + + P LVKL + +V EY P G + HL + P + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP---HARF 145
Query: 196 KIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST 255
AA +YLH +IYRDLK N+++++ + K++DFG AK V
Sbjct: 146 -YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKG 193
Query: 256 RVM---GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
R GT Y AP+ ++ D ++ GV++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 58
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 112
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+ G
Sbjct: 113 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGV 154
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
T + T Y AP+ + + + DI+S G + E++T R
Sbjct: 155 PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 21/225 (9%)
Query: 78 AKPFTFDELAAA--TGNFRSDCCLGEGGFGKVYKGCLEKIE-QVVAIKQLDHRGVQGVRE 134
A P F + + A + ++ LG+G FG+V C +KI Q A+K + R V+ +
Sbjct: 35 ATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVIL-CKDKITGQECAVKVISKRQVKQKTD 93
Query: 135 FSA---EVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDW 191
+ EV L DHPN++KL + + LV E G L D +
Sbjct: 94 KESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGG----ELFDEIISRKRFSE 149
Query: 192 NTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSG 248
+I G+ Y+H K +++RDLK N+LLE + + ++ DFGL+ +
Sbjct: 150 VDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 206
Query: 249 DKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
K +GT Y AP+ + G K D++S GV+L L++G
Sbjct: 207 KKMKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 59
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 113
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+ G
Sbjct: 114 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGV 155
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
T + T Y AP+ + + + DI+S G + E++T R
Sbjct: 156 PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 58
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 112
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+ G
Sbjct: 113 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGV 154
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
T + T Y AP+ + + + DI+S G + E++T R
Sbjct: 155 PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 59
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 113
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+ G
Sbjct: 114 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGV 155
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
T + T Y AP+ + + + DI+S G + E++T R
Sbjct: 156 PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 27/201 (13%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
+G+G FG V Y+G VA+K + + + F AE + H NLV+L+
Sbjct: 20 IGKGEFGDVMLGDYRG------NKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLL 71
Query: 155 GYCAEGDQRL-LVYEYMPLGSLDKHLHDLRPDTRP-LDWNTRMKIAAGASRGLQYLHEQL 212
G E L +V EYM GSL +L R R L + +K + ++YL
Sbjct: 72 GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE--- 125
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT-HVSTRVMGTYGYCAPDYAMT 271
++RDL N+L+ E K+SDFGL K S T + + + AP+
Sbjct: 126 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALRE 179
Query: 272 GQLTFKSDIYSFGVVLLELIT 292
+ KSD++SFG++L E+ +
Sbjct: 180 AAFSTKSDVWSFGILLWEIYS 200
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 22/235 (9%)
Query: 84 DELAAATGNFRSDCCLGEGGFGKVYKGC-LEKIEQVVAIKQLD-HRGVQG-----VREFS 136
D L A + +GEG +GKV+K L+ + VA+K++ G +G +RE
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV- 62
Query: 137 AEVMTLGSADHPNLVKLIGYCA----EGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDW 191
A + L + +HPN+V+L C + + +L LV+E++ L +L + P +
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTE- 120
Query: 192 NTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT 251
T + RGL +LH V++RDLK NIL+ KL+DFGLA++
Sbjct: 121 -TIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQ 173
Query: 252 HVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
T V+ T Y AP+ + D++S G + E+ + + D +L
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL 228
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 109/258 (42%), Gaps = 55/258 (21%)
Query: 90 TGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPN 149
+F LG+G FG+V K + AIK++ H + + +EVM L S +H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQY 63
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKH--------------LHDL-----RPDTRPLD 190
+V+ Y A ++R V P+ ++ K L+DL R
Sbjct: 64 VVRY--YAAWLERRNFV---KPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY 118
Query: 191 WNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK------- 243
W +I L Y+H Q +I+RDLK NI ++E + K+ DFGLAK
Sbjct: 119 WRLFRQIL----EALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 244 --------MGPSGDKTHVSTRVMGTYGYCAPDYA-MTGQLTFKSDIYSFGVVLLELI--- 291
+ S D T +GT Y A + TG K D+YS G++ E+I
Sbjct: 172 ILKLDSQNLPGSSDNL---TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPF 228
Query: 292 -TGRKAIDQTKDRKELNL 308
TG + ++ K + +++
Sbjct: 229 STGMERVNILKKLRSVSI 246
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFS---AEVMTLGSADHPNLVKLIG 155
LG+G FGKV + + A+K L + E + E L ++ HP L L
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 215
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQP 215
D+ V EY G L HL R + A L YLH + +
Sbjct: 216 SFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDYLHSE--KN 269
Query: 216 VIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLT 275
V+YRDLK N++L++ H K++DFGL K G T + GT Y AP+
Sbjct: 270 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPEVLEDNDYG 327
Query: 276 FKSDIYSFGVVLLELITGR 294
D + GVV+ E++ GR
Sbjct: 328 RAVDWWGLGVVMYEMMCGR 346
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 13/208 (6%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQ-GVR-EFSAEVMTLGSADHPN 149
+F LG G G V+K K +V ++L H ++ +R + E+ L + P
Sbjct: 26 DFEKISELGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLH 209
+V G + + E+M GSLD+ L + K++ +GL YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLR 140
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
E K +++RD+K SNIL+ KL DFG++ G D ++ +GT Y +P+
Sbjct: 141 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERL 194
Query: 270 MTGQLTFKSDIYSFGVVLLELITGRKAI 297
+ +SDI+S G+ L+E+ GR I
Sbjct: 195 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFS---AEVMTLGSADHPNLVKLIG 155
LG+G FGKV + + A+K L + E + E L ++ HP L L
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 218
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQP 215
D+ V EY G L HL R + A L YLH + +
Sbjct: 219 SFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDYLHSE--KN 272
Query: 216 VIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLT 275
V+YRDLK N++L++ H K++DFGL K G T + GT Y AP+
Sbjct: 273 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPEVLEDNDYG 330
Query: 276 FKSDIYSFGVVLLELITGR 294
D + GVV+ E++ GR
Sbjct: 331 RAVDWWGLGVVMYEMMCGR 349
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 91/215 (42%), Gaps = 24/215 (11%)
Query: 99 LGEGGFGKVYKGCLEKI-----EQVVAIKQLDHRGVQGVRE-FSAEVMTLGS-ADHPNLV 151
LG G FGKV + + VA+K L RE +E+ L +H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLR-----PDTRP---------LDWNTRMKI 197
L+G C G L++ EY G L L R T P LD +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+ ++G+ +L + I+RDL NILL G K+ DFGLA+ + V
Sbjct: 174 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ TF+SD++S+G+ L EL +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 66
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 120
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+ G
Sbjct: 121 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGV 162
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
T + T Y AP+ + + + DI+S G + E++T R
Sbjct: 163 PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 60
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 114
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+ G
Sbjct: 115 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGV 156
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
T + T Y AP+ + + + DI+S G + E++T R
Sbjct: 157 PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 63
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 117
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+ G
Sbjct: 118 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGV 159
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
T + T Y AP+ + + + DI+S G + E++T R
Sbjct: 160 PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 13/211 (6%)
Query: 91 GNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQ--GVREFSAEVMTLGSADHP 148
GN+R +G+G F KV + VAIK +D + +++ EV + +HP
Sbjct: 12 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 149 NLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYL 208
N+VKL L+ EY G + +L R + R K S +QY
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYL---VAHGRMKEKEARSKFRQIVS-AVQYC 127
Query: 209 HEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY 268
H++ +++RDLK N+LL+ + K++DFG + G K G+ Y AP+
Sbjct: 128 HQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPEL 181
Query: 269 AMTGQLT-FKSDIYSFGVVLLELITGRKAID 298
+ + D++S GV+L L++G D
Sbjct: 182 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 99 LGEGGFGKVY-----KGCLEKIEQVVAIKQLD-------HRGVQGVRE-FSAEVMTLGSA 145
LG G +G+V G EK +V+ Q D ++ ++ E E+ L S
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGL 205
DHPN++KL + LV E+ G L + + + D I G+
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI----INRHKFDECDAANIMKQILSGI 159
Query: 206 QYLHEQLKQPVIYRDLKCSNILLEEG---YHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
YLH K +++RD+K NILLE + K+ DFGL+ K + +GT
Sbjct: 160 CYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS---KDYKLRDRLGTAY 213
Query: 263 YCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y AP+ + + K D++S GV++ L+ G
Sbjct: 214 YIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 21/213 (9%)
Query: 87 AAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLG 143
A F LG G FG+V ++ A+K LD + V +++ E
Sbjct: 38 TAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQ 97
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
+ + P LVKL + +V EY P G + HL + + P + R AA
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 153
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GT 260
+YLH +IYRDLK N+L+++ + K++DFG AK V R GT
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGT 202
Query: 261 YGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y AP+ ++ D ++ GV++ E+ G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 90 TGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQ--GVREFSAEVMTLGSADH 147
GN+R +G+G F KV + VAIK +D + +++ EV + +H
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH 73
Query: 148 PNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
PN+VKL L+ EY G + +L R + R K S +QY
Sbjct: 74 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYL---VAHGRMKEKEARSKFRQIVS-AVQY 129
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYC-AP 266
H++ +++RDLK N+LL+ + K++DFG + G K +C AP
Sbjct: 130 CHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD---------AFCGAP 177
Query: 267 DYAMTGQLTFKS------DIYSFGVVLLELITGRKAID 298
YA K D++S GV+L L++G D
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 37/221 (16%)
Query: 87 AAATGNFRSDCCLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREF 135
A F LG G FG+V Y + ++VV +KQ++H
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------- 88
Query: 136 SAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM 195
E L + + P LVKL + +V EY P G + HL + + P + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF 145
Query: 196 KIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST 255
AA +YLH +IYRDLK N+++++ + +++DFG AK V
Sbjct: 146 -YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGFAK--------RVKG 193
Query: 256 RVM---GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
R GT Y AP+ ++ D ++ GV++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 16/217 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQ-GVR-EFSAEVMTLGSADHPN 149
+F LG G G V+K K +V ++L H ++ +R + E+ L + P
Sbjct: 7 DFEKISELGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLH 209
+V G + + E+M GSLD+ L + K++ +GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLR 121
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT-HVSTRVMGTYGYCAPDY 268
E K +++RD+K SNIL+ KL DFG+ SG ++ +GT Y +P+
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPER 174
Query: 269 AMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKE 305
+ +SDI+S G+ L+E+ GR I D KE
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI-PPPDAKE 210
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 43/230 (18%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
+F+ +G GGFG+V+K + I+++ + + RE A L DH N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKA----LAKLDHVNIV 68
Query: 152 KLIGYCAEG--------DQRLLVYEYMP----------------------LGSLDKHLHD 181
G C +G D L +Y P G+L++ +
Sbjct: 69 HYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 182 LRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGL 241
R + LD +++ ++G+ Y+H + +I+RDLK SNI L + K+ DFGL
Sbjct: 128 RRGE--KLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGL 182
Query: 242 AKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELI 291
+ K TR GT Y +P+ + + D+Y+ G++L EL+
Sbjct: 183 VTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 19/220 (8%)
Query: 81 FTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIE-QVVAIKQLDHRGVQGVREFSA-- 137
F A + ++ LG+G FG+V C +KI Q A+K + R V+ + +
Sbjct: 22 FVQHSTAIFSDRYKGQRVLGKGSFGEVIL-CKDKITGQECAVKVISKRQVKQKTDKESLL 80
Query: 138 -EVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMK 196
EV L DHPN++KL + + LV E G L + R +D +
Sbjct: 81 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS-RKRFSEVD---AAR 136
Query: 197 IAAGASRGLQYLHEQLKQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHV 253
I G+ Y+H K +++RDLK N+LLE + + ++ DFGL+ + K
Sbjct: 137 IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 193
Query: 254 STRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
+GT Y AP+ + G K D++S GV+L L++G
Sbjct: 194 K---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 27/201 (13%)
Query: 99 LGEGGFGKV----YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
+G+G FG V Y+G VA+K + + + F AE + H NLV+L+
Sbjct: 201 IGKGEFGDVMLGDYRG------NKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLL 252
Query: 155 GYCAEGDQRL-LVYEYMPLGSLDKHLHDLRPDTRP-LDWNTRMKIAAGASRGLQYLHEQL 212
G E L +V EYM GSL +L R R L + +K + ++YL
Sbjct: 253 GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE--- 306
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT-HVSTRVMGTYGYCAPDYAMT 271
++RDL N+L+ E K+SDFGL K S T + + + AP+
Sbjct: 307 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALRE 360
Query: 272 GQLTFKSDIYSFGVVLLELIT 292
+ + KSD++SFG++L E+ +
Sbjct: 361 KKFSTKSDVWSFGILLWEIYS 381
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRG--VQGVREFSAEVMTLGSADHPNLVKLIGY 156
+G G G+V+K K V+A+KQ+ G + R + L S D P +V+ G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
+ E M G+ + L + P+ K+ + L YL E K V
Sbjct: 93 FITNTDVFIAMELM--GTCAEKLK--KRMQGPIPERILGKMTVAIVKALYYLKE--KHGV 146
Query: 217 IYRDLKCSNILLEEGYHPKLSDFGL--------AKMGPSGDKTHVSTRVMGTYGYCAPDY 268
I+RD+K SNILL+E KL DFG+ AK +G +++ + PDY
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDY 206
Query: 269 AMTGQLTFKSDIYSFGVVLLELITGR 294
+ ++D++S G+ L+EL TG+
Sbjct: 207 DI------RADVWSLGISLVELATGQ 226
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 87/214 (40%), Gaps = 11/214 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFS---AEVMTLGSADHPNLVKLIG 155
LG+G FGKV + + A+K L + E + E L ++ HP L L
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 75
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQP 215
D+ V EY G L HL R + A L YLH + +
Sbjct: 76 SFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDYLHSE--KN 129
Query: 216 VIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLT 275
V+YRDLK N++L++ H K++DFGL K G T GT Y AP+
Sbjct: 130 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYG 187
Query: 276 FKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
D + GVV+ E++ GR K L+
Sbjct: 188 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 221
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 92/221 (41%), Gaps = 37/221 (16%)
Query: 87 AAATGNFRSDCCLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREF 135
A F LG G FG+V Y + ++VV +KQ++H
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------- 89
Query: 136 SAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM 195
E L + + P L KL + +V EY P G + HL + + P + R
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF 146
Query: 196 KIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST 255
AA +YLH +IYRDLK N+++++ + K++DFG AK V
Sbjct: 147 -YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKG 194
Query: 256 RVM---GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
R GT Y AP+ ++ D ++ GV++ E+ G
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 92/228 (40%), Gaps = 12/228 (5%)
Query: 86 LAAATGN-FRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFS---AEVMT 141
+A T N F LG+G FGKV + + A+K L + E + E
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 62
Query: 142 LGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGA 201
L ++ HP L L D+ V EY G L HL R + A
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEI 118
Query: 202 SRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTY 261
L YLH + + V+YRDLK N++L++ H K++DFGL K G T GT
Sbjct: 119 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTP 174
Query: 262 GYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ D + GVV+ E++ GR K L+
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 222
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 59
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 113
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+
Sbjct: 114 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
+T+ V T Y AP+ + + + DI+S G + E++T R
Sbjct: 158 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 92/221 (41%), Gaps = 37/221 (16%)
Query: 87 AAATGNFRSDCCLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREF 135
A F LG G FG+V Y + ++VV +KQ++H
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------- 89
Query: 136 SAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM 195
E L + + P L KL + +V EY P G + HL + + P + R
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF 146
Query: 196 KIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST 255
AA +YLH +IYRDLK N+++++ + K++DFG AK V
Sbjct: 147 -YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKG 194
Query: 256 RVM---GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
R GT Y AP+ ++ D ++ GV++ E+ G
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 59
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 113
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+
Sbjct: 114 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
+T+ V T Y AP+ + + + DI+S G + E++T R
Sbjct: 158 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 132 VREFSAEVMTLGSADHPNLVKLIGYCAEG--DQRLLVYEYMPLGSLDKHLHDLRPDTRPL 189
+ + E+ L DHPN+VKL+ + D +V+E + G + + P +PL
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-----VPTLKPL 134
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+ +G++YLH Q +I+RD+K SN+L+ E H K++DFG++ D
Sbjct: 135 SEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD 191
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQLTFKS---DIYSFGVVLLELITGR 294
+T +GT + AP+ + F D+++ GV L + G+
Sbjct: 192 ALLSNT--VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 87/214 (40%), Gaps = 11/214 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFS---AEVMTLGSADHPNLVKLIG 155
LG+G FGKV + + A+K L + E + E L ++ HP L L
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 77
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQP 215
D+ V EY G L HL R + A L YLH + +
Sbjct: 78 SFQTHDRLCFVMEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSE--KN 131
Query: 216 VIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLT 275
V+YRDLK N++L++ H K++DFGL K G T GT Y AP+
Sbjct: 132 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYG 189
Query: 276 FKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
D + GVV+ E++ GR K L+
Sbjct: 190 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 223
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 59
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 113
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+
Sbjct: 114 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
+T+ V T Y AP+ + + + DI+S G + E++T R
Sbjct: 158 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 59
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 113
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+
Sbjct: 114 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
+T+ V T Y AP+ + + + DI+S G + E++T R
Sbjct: 158 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 58
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 112
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+
Sbjct: 113 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 156
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
+T+ V T Y AP+ + + + DI+S G + E++T R
Sbjct: 157 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 21/225 (9%)
Query: 78 AKPFTFDELAAA--TGNFRSDCCLGEGGFGKVYKGCLEKIE-QVVAIKQLDHRGVQGVRE 134
A P F + + A + ++ LG+G FG+V C +KI Q A+K + R V+ +
Sbjct: 11 ATPGXFVQHSTAIFSDRYKGQRVLGKGSFGEVIL-CKDKITGQECAVKVISKRQVKQKTD 69
Query: 135 FSA---EVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDW 191
+ EV L DHPN+ KL + + LV E G L D +
Sbjct: 70 KESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGG----ELFDEIISRKRFSE 125
Query: 192 NTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSG 248
+I G+ Y H K +++RDLK N+LLE + + ++ DFGL+ +
Sbjct: 126 VDAARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182
Query: 249 DKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
K +GT Y AP+ + G K D++S GV+L L++G
Sbjct: 183 KKXKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQ-GVR-EFSAEVMTLGSADHPN 149
+F LG G G V+K K +V ++L H ++ +R + E+ L + P
Sbjct: 10 DFEKISELGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLH 209
+V G + + E+M GSLD+ L + K++ +GL YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLR 124
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
E K +++RD+K SNIL+ KL DFG++ G D+ ++ +GT Y +P+
Sbjct: 125 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE--MANEFVGTRSYMSPERL 178
Query: 270 MTGQLTFKSDIYSFGVVLLELITGR 294
+ +SDI+S G+ L+E+ GR
Sbjct: 179 QGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 60
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 114
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+
Sbjct: 115 -------------QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV 158
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
+T+ V T Y AP+ + + + DI+S G + E++T R
Sbjct: 159 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 60
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 114
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+
Sbjct: 115 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 158
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
+T+ V T Y AP+ + + + DI+S G + E++T R
Sbjct: 159 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 62
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 116
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+
Sbjct: 117 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 160
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
+T+ V T Y AP+ + + + DI+S G + E++T R
Sbjct: 161 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 61
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 115
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+
Sbjct: 116 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 159
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
+T+ V T Y AP+ + + + DI+S G + E++T R
Sbjct: 160 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLI 154
LG G FG+V ++ A+K LD + V +++ E L + + P LVKL
Sbjct: 69 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 128
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ +V EY+ G + HL + + P + R AA +YLH
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL--- 181
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+IYRDLK N+L+++ + +++DFG AK T + GT Y AP+ ++
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT-----LCGTPEYLAPEIILSKGY 236
Query: 275 TFKSDIYSFGVVLLELITG 293
D ++ GV++ E+ G
Sbjct: 237 NKAVDWWALGVLIYEMAAG 255
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 58
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 112
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+
Sbjct: 113 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 156
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
+T+ V T Y AP+ + + + DI+S G + E++T R
Sbjct: 157 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 61
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 115
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+
Sbjct: 116 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 159
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
+T+ V T Y AP+ + + + DI+S G + E++T R
Sbjct: 160 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 97 CCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGY 156
LG+G +G VY G + +AIK++ R + + E+ H N+V+ +G
Sbjct: 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHD----LRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
+E + E +P GSL L L+ + + + + T+ + GL+YLH+
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHD-- 140
Query: 213 KQPVIYRDLKCSNILLEEGYHP--KLSDFG----LAKMGPSGDKTHVSTRVMGTYGYCAP 266
+++RD+K N+L+ Y K+SDFG LA + P + GT Y AP
Sbjct: 141 -NQIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINP------CTETFTGTLQYMAP 192
Query: 267 DYAMTGQLTF--KSDIYSFGVVLLELITGR 294
+ G + +DI+S G ++E+ TG+
Sbjct: 193 EIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 16/207 (7%)
Query: 99 LGEGGFGKVYKGCLEK-----IEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL 153
LG+G FG V + L++ ++ V + + D + EF E + DHP++ KL
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 154 IGYCAEGDQR------LLVYEYMPLGSLDKHLHDLRPDTRP--LDWNTRMKIAAGASRGL 205
+G + +++ +M G L L R P L T ++ + G+
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 206 QYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCA 265
+YL + I+RDL N +L E ++DFGL++ SGD + A
Sbjct: 151 EYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ T SD+++FGV + E++T
Sbjct: 208 LESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 61
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 115
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+
Sbjct: 116 -------------QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV 159
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
+T+ V T Y AP+ + + + DI+S G + E++T R
Sbjct: 160 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 60
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 114
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+
Sbjct: 115 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 158
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
+T+ V T Y AP+ + + + DI+S G + E++T R
Sbjct: 159 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 62
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 116
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+
Sbjct: 117 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 160
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
+T+ V T Y AP+ + + + DI+S G + E++T R
Sbjct: 161 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 62
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLL------ 116
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+
Sbjct: 117 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 160
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
+T+ V T Y AP+ + + + DI+S G + E++T R
Sbjct: 161 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 63
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 117
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+
Sbjct: 118 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 161
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
+T+ V T Y AP+ + + + DI+S G + E++T R
Sbjct: 162 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLI 154
LG G FG+V ++ A+K LD + V +++ E L + + P LVKL
Sbjct: 35 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 94
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ +V EY+ G + HL + + P + R AA +YLH
Sbjct: 95 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL--- 147
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+IYRDLK N+L++E + +++DFG AK + + GT Y AP+ ++
Sbjct: 148 DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGY 202
Query: 275 TFKSDIYSFGVVLLELITG 293
D ++ GV++ E+ G
Sbjct: 203 NKAVDWWALGVLIYEMAAG 221
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 26/222 (11%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADHPNL 150
+FR LG G F +V ++ +++VAIK + + ++G E+ L HPN+
Sbjct: 21 DFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNI 78
Query: 151 VKLIGYCAEGDQRLLVYEYMPLGSL-----DKHLHDLRPDTRPLDWNTRMKIAAGASRGL 205
V L G L+ + + G L +K + R +R + +
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---------LIFQVLDAV 129
Query: 206 QYLHEQLKQPVIYRDLKCSNIL---LEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
+YLH+ +++RDLK N+L L+E +SDFGL+KM G V + GT G
Sbjct: 130 KYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPG 183
Query: 263 YCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRK 304
Y AP+ + D +S GV+ L+ G D K
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK 225
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 91/221 (41%), Gaps = 37/221 (16%)
Query: 87 AAATGNFRSDCCLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREF 135
A F LG G FG+V Y + ++VV +KQ++H
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------- 89
Query: 136 SAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM 195
E L + + P L KL + +V EY P G + HL + P + R
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP---HARF 146
Query: 196 KIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST 255
AA +YLH +IYRDLK N+++++ + K++DFG AK V
Sbjct: 147 -YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKG 194
Query: 256 RVM---GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
R GT Y AP+ ++ D ++ GV++ E+ G
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 18/199 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQV---VAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIG 155
+GEG G V CL + + VA+K +D R Q EV+ + H N+V++
Sbjct: 53 IGEGSTGIV---CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYK 109
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQP 215
G++ ++ E++ G+L + +R L+ + + L YLH Q
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIVSQVR-----LNEEQIATVCEAVLQALAYLH---AQG 161
Query: 216 VIYRDLKCSNILLEEGYHPKLSDFGL-AKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
VI+RD+K +ILL KLSDFG A++ K ++GT + AP+
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK---RKXLVGTPYWMAPEVISRSLY 218
Query: 275 TFKSDIYSFGVVLLELITG 293
+ DI+S G++++E++ G
Sbjct: 219 ATEVDIWSLGIMVIEMVDG 237
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+K++ + GV +RE S L
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKEL 62
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGL 205
+HPN+VKL+ ++ LV+E++ D+ L D L I + + L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHV-----DQDLKKFM-DASALTGIPLPLIKSYLFQLL 116
Query: 206 QYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCA 265
Q L V++RDLK N+L+ KL+DFGLA+ +T+ V T Y A
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 174
Query: 266 PDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
P+ + + + DI+S G + E++T R
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 31/207 (14%)
Query: 98 CLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSAD 146
LG G FG+V Y + ++VV +KQ++H E L + +
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVN 99
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQ 206
P LVKL + +V EY+ G + HL + + P + R AA +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 155
Query: 207 YLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
YLH +IYRDLK N+L+++ + +++DFG AK + + GT Y AP
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLXGTPEYLAP 207
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELITG 293
+ ++ D ++ GV++ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 31/207 (14%)
Query: 98 CLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSAD 146
LG G FG+V Y + ++VV +KQ++H E L + +
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVN 99
Query: 147 HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQ 206
P LVKL + +V EY+ G + HL + + P + R AA +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 155
Query: 207 YLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
YLH +IYRDLK N+L+++ + +++DFG AK + + GT Y AP
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLAGTPEYLAP 207
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELITG 293
+ ++ D ++ GV++ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 16/220 (7%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHP 148
+F LG+G FGKV + +++ A+K L V V E L P
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 149 NLVKLIGYCAEGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
+ + C + RL V EY+ G L H+ + P + AA + GL +
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP----HAVFYAAEIAIGLFF 136
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM-GTYGYCAP 266
L + +IYRDLK N++L+ H K++DFG+ K V+T+ GT Y AP
Sbjct: 137 LQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAP 190
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+ D ++FGV+L E++ G+ + +D EL
Sbjct: 191 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF-EGEDEDEL 229
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+ ++ + GV +RE S L
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREIS----LLKEL 59
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 113
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+ G
Sbjct: 114 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGV 155
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
T + T Y AP+ + + + DI+S G + E++T R
Sbjct: 156 PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 51/226 (22%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGV--QGVREFSAEVMTLGSA 145
NF+ +GEG +G VYK + +VVA+ ++ + GV +RE S L
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREIS----LLKEL 58
Query: 146 DHPNLVKLIGYCAEGDQRLLVYEYM----------------PLGSLDKHLHDLRPDTRPL 189
+HPN+VKL+ ++ LV+E++ PL + +L L
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL------ 112
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+GL + H V++RDLK N+L+ KL+DFGLA+ G
Sbjct: 113 -------------QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGV 154
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGR 294
T + T Y AP+ + + + DI+S G + E++T R
Sbjct: 155 PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 97 CCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGY 156
LG+G +G VY G + +AIK++ R + + E+ H N+V+ +G
Sbjct: 14 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHD----LRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
+E + E +P GSL L L+ + + + + T+ + GL+YLH+
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHD-- 126
Query: 213 KQPVIYRDLKCSNILLEEGYHP--KLSDFG----LAKMGPSGDKTHVSTRVMGTYGYCAP 266
+++RD+K N+L+ Y K+SDFG LA + P + GT Y AP
Sbjct: 127 -NQIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINP------CTETFTGTLQYMAP 178
Query: 267 DYAMTGQLTF--KSDIYSFGVVLLELITGR 294
+ G + +DI+S G ++E+ TG+
Sbjct: 179 EIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 24/211 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHPNLVKLIG 155
LG+GGF K ++ ++V A K + + + S E+ S H ++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLR-----PDTRPLDWNTRMKIAAGASRGLQYLHE 210
+ + D +V E SL + LH R P+ R + R + G QYLH
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR---YYLRQIVL-----GCQYLH- 156
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLA-KMGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ VI+RDLK N+ L E K+ DFGLA K+ G++ V + GT Y AP+
Sbjct: 157 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVL 211
Query: 270 MTGQLTFKSDIYSFGVVLLELITGRKAIDQT 300
+F+ D++S G ++ L+ G+ + +
Sbjct: 212 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 26/222 (11%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADHPNL 150
+FR LG G F +V ++ +++VAIK + ++G E+ L HPN+
Sbjct: 21 DFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 151 VKLIGYCAEGDQRLLVYEYMPLGSL-----DKHLHDLRPDTRPLDWNTRMKIAAGASRGL 205
V L G L+ + + G L +K + R +R + +
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---------LIFQVLDAV 129
Query: 206 QYLHEQLKQPVIYRDLKCSNIL---LEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
+YLH+ +++RDLK N+L L+E +SDFGL+KM G V + GT G
Sbjct: 130 KYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPG 183
Query: 263 YCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRK 304
Y AP+ + D +S GV+ L+ G D K
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK 225
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 24/211 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHPNLVKLIG 155
LG+GGF K ++ ++V A K + + + S E+ S H ++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLR-----PDTRPLDWNTRMKIAAGASRGLQYLHE 210
+ + D +V E SL + LH R P+ R + R + G QYLH
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR---YYLRQIVL-----GCQYLH- 158
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLA-KMGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ VI+RDLK N+ L E K+ DFGLA K+ G++ V + GT Y AP+
Sbjct: 159 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVL 213
Query: 270 MTGQLTFKSDIYSFGVVLLELITGRKAIDQT 300
+F+ D++S G ++ L+ G+ + +
Sbjct: 214 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 14/212 (6%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHPNLVKLIG 155
LG+G FGKV + +++ A+K L V V E L P + +
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 156 YCAEGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
C + RL V EY+ G L H+ + P + AA + GL +L +
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP----HAVFYAAEIAIGLFFLQ---SK 461
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+IYRDLK N++L+ H K++DFG+ K T + GT Y AP+
Sbjct: 462 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEIIAYQPY 519
Query: 275 TFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
D ++FGV+L E++ G+ + +D EL
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPF-EGEDEDEL 550
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLI 154
LG G FG+V ++ A+K LD + V +++ E L + + P LVKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ +V EY+ G + HL + + P + R AA +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL--- 160
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GTYGYCAPDYAMT 271
+IYRDLK N+L+++ + +++DFG AK V R GT Y AP+ ++
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILS 212
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLI 154
LG G FG+V ++ A+K LD + V +++ E L + + P LVKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ +V EY+ G + HL + + P + R AA +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL--- 160
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GTYGYCAPDYAMT 271
+IYRDLK N+L+++ + +++DFG AK V R GT Y AP+ ++
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILS 212
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLI 154
LG G FG+V ++ A+K LD + V +++ E L + + P LVKL
Sbjct: 49 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ +V EY+ G + HL + + P + R AA +YLH
Sbjct: 109 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL--- 161
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GTYGYCAPDYAMT 271
+IYRDLK N+L+++ + +++DFG AK V R GT Y AP+ ++
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILS 213
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
D ++ GV++ E+ G
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 37/221 (16%)
Query: 87 AAATGNFRSDCCLGEGGFGKV-----------YKGCLEKIEQVVAIKQLDHRGVQGVREF 135
A F LG G FG+V Y + ++VV +KQ++H
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------- 88
Query: 136 SAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM 195
E L + + P LVKL + +V EY+ G + HL + + P + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF 145
Query: 196 KIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVST 255
AA +YLH +IYRDLK N+L+++ + +++DFG AK V
Sbjct: 146 -YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 256 RVM---GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
R GT Y AP+ ++ D ++ GV++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 26/222 (11%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADHPNL 150
+FR LG G F +V ++ +++VAIK + ++G E+ L HPN+
Sbjct: 21 DFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 151 VKLIGYCAEGDQRLLVYEYMPLGSL-----DKHLHDLRPDTRPLDWNTRMKIAAGASRGL 205
V L G L+ + + G L +K + R +R + +
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---------LIFQVLDAV 129
Query: 206 QYLHEQLKQPVIYRDLKCSNIL---LEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
+YLH+ +++RDLK N+L L+E +SDFGL+KM G V + GT G
Sbjct: 130 KYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPG 183
Query: 263 YCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRK 304
Y AP+ + D +S GV+ L+ G D K
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK 225
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLI 154
LG G FG+V ++ A+K LD + V +++ E L + + P LVKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ +V EY+ G + HL + + P + R AA +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL--- 160
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GTYGYCAPDYAMT 271
+IYRDLK N+L+++ + +++DFG AK V R GT Y AP+ ++
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILS 212
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 24/211 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHPNLVKLIG 155
LG+GGF K ++ ++V A K + + + S E+ S H ++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLR-----PDTRPLDWNTRMKIAAGASRGLQYLHE 210
+ + D +V E SL + LH R P+ R + R + G QYLH
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR---YYLRQIVL-----GCQYLH- 132
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLA-KMGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ VI+RDLK N+ L E K+ DFGLA K+ G++ V + GT Y AP+
Sbjct: 133 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVL 187
Query: 270 MTGQLTFKSDIYSFGVVLLELITGRKAIDQT 300
+F+ D++S G ++ L+ G+ + +
Sbjct: 188 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLI 154
LG G FG+V ++ A+K LD + V +++ E L + + P LVKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ +V EY+ G + HL + + P + R AA +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL--- 160
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GTYGYCAPDYAMT 271
+IYRDLK N+L+++ + +++DFG AK V R GT Y AP+ ++
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILS 212
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLI 154
LG G FG+V ++ A+K LD + V +++ E L + + P LVKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ +V EY+ G + HL + + P + R AA +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL--- 160
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GTYGYCAPDYAMT 271
+IYRDLK N+L+++ + +++DFG AK V R GT Y AP+ ++
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILS 212
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 26/215 (12%)
Query: 91 GNF-RSDCCLGEGGFGKVYKGC-LEKIEQVVAIKQLDHRGVQGVRE-FSAEVMTLGSADH 147
G F + D +G G F VYKG E +V + D + + R+ F E L H
Sbjct: 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQH 84
Query: 148 PNLVKLIGY---CAEGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR 203
PN+V+ +G + + LV E G+L +L + ++K+ R
Sbjct: 85 PNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKV--------XKIKVLRSWCR 136
Query: 204 ----GLQYLHEQLKQPVIYRDLKCSNILLE-EGYHPKLSDFGLAKMGPSGDKTHVSTRVM 258
GLQ+LH + P+I+RDLKC NI + K+ D GLA + + + V+
Sbjct: 137 QILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVI 191
Query: 259 GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
GT + AP+ + D+Y+FG LE T
Sbjct: 192 GTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATS 225
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
+GEG +G V K + ++VAIK+ D + V+ + E+ L H NLV L+
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIA--MREIKLLKQLRHENLVNLL 90
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
C + + LV+E++ LD DL LD+ K G+ + H
Sbjct: 91 EVCKKKKRWYLVFEFVDHTILD----DLELFPNGLDYQVVQKYLFQIINGIGFCH---SH 143
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAK-MGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
+I+RD+K NIL+ + KL DFG A+ + G+ V + T Y AP+ + G
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE---VYDDEVATRWYRAPE-LLVGD 199
Query: 274 LTF--KSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
+ + D+++ G ++ E+ G D +L
Sbjct: 200 VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQL 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLI 154
LG G FG+V ++ A+K LD + V +++ E L + + P LVKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ +V EY+ G + HL + P + R AA +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP---HARF-YAAQIVLTFEYLHSL--- 160
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GTYGYCAPDYAMT 271
+IYRDLK N+L+++ + +++DFG AK V R GT Y AP+ ++
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILS 212
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 26/222 (11%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVR-EFSAEVMTLGSADHPNL 150
+FR LG G F +V ++ +++VAIK + ++G E+ L HPN+
Sbjct: 21 DFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 151 VKLIGYCAEGDQRLLVYEYMPLGSL-----DKHLHDLRPDTRPLDWNTRMKIAAGASRGL 205
V L G L+ + + G L +K + R +R + +
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---------LIFQVLDAV 129
Query: 206 QYLHEQLKQPVIYRDLKCSNIL---LEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
+YLH+ +++RDLK N+L L+E +SDFGL+KM G V + GT G
Sbjct: 130 KYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPG 183
Query: 263 YCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRK 304
Y AP+ + D +S GV+ L+ G D K
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK 225
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLI 154
LG G FG+V ++ A+K LD + V +++ E L + + P LVKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ +V EY+ G + HL + P + R AA +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLHSL--- 160
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GTYGYCAPDYAMT 271
+IYRDLK N+L+++ + +++DFG AK V R GT Y AP+ ++
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILS 212
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 24/215 (11%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIE-----QVVAIKQLDHRGV----QGVREFSAEVMTL 142
NF LG G +GKV+ + KI ++ A+K L + + E L
Sbjct: 55 NFELLKVLGTGAYGKVF--LVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 112
Query: 143 GSADHPNLVKLIGYCAEGDQRL-LVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG- 200
+ + Y + + +L L+ +Y+ G L HL R ++I G
Sbjct: 113 EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL-----SQRERFTEHEVQIYVGE 167
Query: 201 ASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT 260
L++LH K +IYRD+K NILL+ H L+DFGL+K + D+T + GT
Sbjct: 168 IVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA-DETERAYDFCGT 223
Query: 261 YGYCAPDYAMTGQLTFKS--DIYSFGVVLLELITG 293
Y APD G D +S GV++ EL+TG
Sbjct: 224 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLI 154
LG G FG+V ++ A+K LD + V +++ E L + + P LVKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ +V EY+ G + HL + P + R AA +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLHSL--- 160
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GTYGYCAPDYAMT 271
+IYRDLK N+L+++ + +++DFG AK V R GT Y AP+ ++
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILS 212
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLI 154
LG G FG+V ++ A+K LD + V +++ E L + + P LVKL
Sbjct: 43 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 102
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ +V EY+ G + HL + P + R AA +YLH
Sbjct: 103 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLHSL--- 155
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GTYGYCAPDYAMT 271
+IYRDLK N+L+++ + +++DFG AK V R GT Y AP+ ++
Sbjct: 156 DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILS 207
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
D ++ GV++ E+ G
Sbjct: 208 KGYNKAVDWWALGVLIYEMAAG 229
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLI 154
LG G FG+V ++ A+K LD + V +++ E L + + P LVKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ +V EY+ G + HL + + P + R AA +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL--- 160
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GTYGYCAPDYAMT 271
+IYRDLK N+++++ + +++DFG AK V R GT Y AP+ ++
Sbjct: 161 DLIYRDLKPENLIIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIIIS 212
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 99 LGEGGFGKVYKGCLEKIE-----QVVAIKQLDHRGVQGV-REFSAEV-MTLGSADHPNLV 151
LG G FG+V + I+ + VA+K L R +E+ + + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 152 KLIGYCAE-GDQRLLVYEYMPLGSLDKHLHDLRPDTRP--------LDWNTRMKIAAGAS 202
L+G C + G +++ E+ G+L +L R + P L + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV---STRVMG 259
+G+++L + I+RDL NILL E K+ DFGLA+ D +V R+
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR-DIYKDPDYVRKGDARL-- 208
Query: 260 TYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV+L E+ +
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 99 LGEGGFGKVYKGCLEKIE-----QVVAIKQLDHRGVQGV-REFSAEV-MTLGSADHPNLV 151
LG G FG+V + I+ + VA+K L R +E+ + + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 152 KLIGYCAE-GDQRLLVYEYMPLGSLDKHLHDLRPDTRP----------LDWNTRMKIAAG 200
L+G C + G +++ E+ G+L +L R + P L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 201 ASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGT 260
++G+++L + I+RDL NILL E K+ DFGLA+
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 261 YGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV+L E+ +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLI 154
LG G FG+V ++ A+K LD + V +++ E L + + P LVKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ +V EY+ G + HL + P + R AA +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLHSL--- 160
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GTYGYCAPDYAMT 271
+IYRDLK N+L+++ + +++DFG AK V R GT Y AP+ ++
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILS 212
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVV-AIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLI 154
LG G +G+V C +K+ AIK + V A EV L DHPN++KL
Sbjct: 12 LGSGAYGEVLL-CKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ + LV E G L + LR +D MK G YLH K
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVIMKQVLS---GTTYLH---KH 123
Query: 215 PVIYRDLKCSNILLEEGYHP---KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMT 271
+++RDLK N+LLE K+ DFGL+ G K +GT Y AP+ +
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM---KERLGTAYYIAPE-VLR 179
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
+ K D++S GV+L L+ G
Sbjct: 180 KKYDEKCDVWSCGVILYILLCG 201
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 244
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLI 154
LG G FG+V ++ A+K LD + V +++ E L + + P LVKL
Sbjct: 69 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 128
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ +V EY+ G + HL + P + R AA +YLH
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLHSL--- 181
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GTYGYCAPDYAMT 271
+IYRDLK N+L+++ + +++DFG AK V R GT Y AP+ ++
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILS 233
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
D ++ GV++ E+ G
Sbjct: 234 KGYNKAVDWWALGVLIYEMAAG 255
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLI 154
LG G FG+V ++ A+K LD + V +++ E L + + P LVKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ +V EY+ G + HL + + P + R AA +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL--- 160
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GTYGYCAPDYAMT 271
+IYRDLK N+L+++ + +++DFG AK V R GT Y AP+ ++
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILS 212
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
D ++ GV++ ++ G
Sbjct: 213 KGYNKAVDWWALGVLIYQMAAG 234
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 248
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLI 154
LG G FG+V ++ A+K LD + V +++ E L + + P LVKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ +V EY+ G + HL + + P + R AA +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL--- 160
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM---GTYGYCAPDYAMT 271
+IYRDLK N+L+++ + +++DFG AK V R GT Y AP ++
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPAIILS 212
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 244
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 264
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 248
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 246
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 244
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 24/211 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHPNLVKLIG 155
LG+GGF K ++ ++V A K + + + S E+ S H ++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLR-----PDTRPLDWNTRMKIAAGASRGLQYLHE 210
+ + D +V E SL + LH R P+ R + R + G QYLH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR---YYLRQIVL-----GCQYLH- 134
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLA-KMGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ VI+RDLK N+ L E K+ DFGLA K+ G++ + GT Y AP+
Sbjct: 135 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVL 189
Query: 270 MTGQLTFKSDIYSFGVVLLELITGRKAIDQT 300
+F+ D++S G ++ L+ G+ + +
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 24/211 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV---QGVREFSAEVMTLGSADHPNLVKLIG 155
LG+GGF K ++ ++V A K + + + S E+ S H ++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLR-----PDTRPLDWNTRMKIAAGASRGLQYLHE 210
+ + D +V E SL + LH R P+ R + R + G QYLH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR---YYLRQIVL-----GCQYLH- 134
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLA-KMGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ VI+RDLK N+ L E K+ DFGLA K+ G++ + GT Y AP+
Sbjct: 135 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVL 189
Query: 270 MTGQLTFKSDIYSFGVVLLELITGRKAIDQT 300
+F+ D++S G ++ L+ G+ + +
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 24/211 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVRE---FSAEVMTLGSADHPNLVKLIG 155
LG+GGF K ++ ++V A K + + + S E+ S H ++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLR-----PDTRPLDWNTRMKIAAGASRGLQYLHE 210
+ + D +V E SL + LH R P+ R + R + G QYLH
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR---YYLRQIVL-----GCQYLH- 138
Query: 211 QLKQPVIYRDLKCSNILLEEGYHPKLSDFGLA-KMGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ VI+RDLK N+ L E K+ DFGLA K+ G++ + GT Y AP+
Sbjct: 139 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVL 193
Query: 270 MTGQLTFKSDIYSFGVVLLELITGRKAIDQT 300
+F+ D++S G ++ L+ G+ + +
Sbjct: 194 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 99 LGEGGFGKVYKGCLEKIE-----QVVAIKQLDHRGVQGV-REFSAEV-MTLGSADHPNLV 151
LG G FG+V + I+ + VA+K L R +E+ + + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 152 KLIGYCAE-GDQRLLVYEYMPLGSLDKHLHDLRPDTRP--------LDWNTRMKIAAGAS 202
L+G C + G +++ E+ G+L +L R + P L + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV---STRVMG 259
+G+++L + I+RDL NILL E K+ DFGLA+ D +V R+
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL-- 208
Query: 260 TYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV+L E+ +
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 143 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 252
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 244
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 248
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 133 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 242
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 246
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 133 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 242
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 246
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 249
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 141 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 250
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 132 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 241
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 248
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQ-LDHRGVQGVREFSA-EVMTLGSADHPNLVKLIGY 156
+GEG +G V+K Q+VAIK+ L+ +++ + E+ L HPNLV L+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
+ LV+EY L H+L R + + I + + + H K
Sbjct: 71 FRRKRRLHLVFEYCDHTVL----HELDRYQRGVPEHLVKSITWQTLQAVNFCH---KHNC 123
Query: 217 IYRDLKCSNILLEEGYHPKLSDFGLAKM--GPSG-DKTHVSTRVMGTYGYCAPDYAM-TG 272
I+RD+K NIL+ + KL DFG A++ GPS V+TR Y +P+ +
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR-----WYRSPELLVGDT 178
Query: 273 QLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Q D+++ G V EL++G D +L L+
Sbjct: 179 QYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLI 215
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 264
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 248
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T T + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 244
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 22/213 (10%)
Query: 99 LGEGGFGKVYKGCLEKIE-----QVVAIKQLDHRGVQGV-REFSAEV-MTLGSADHPNLV 151
LG G FG+V + I+ + VA+K L R +E+ + + H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 152 KLIGYCAE-GDQRLLVYEYMPLGSLDKHLHDLRPDTRP-----------LDWNTRMKIAA 199
L+G C + G +++ E+ G+L +L R + P L + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 200 GASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG 259
++G+++L + I+RDL NILL E K+ DFGLA+
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 260 TYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV+L E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 94/218 (43%), Gaps = 19/218 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVV-AIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLI 154
LG G +G+V C +K+ AIK + V A EV L DHPN++KL
Sbjct: 29 LGSGAYGEVLL-CKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ + LV E G L + LR +D MK G YLH K
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEI-ILRQKFSEVDAAVIMKQVLS---GTTYLH---KH 140
Query: 215 PVIYRDLKCSNILLEEGYHP---KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMT 271
+++RDLK N+LLE K+ DFGL+ G K +GT Y AP+ +
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM---KERLGTAYYIAPE-VLR 196
Query: 272 GQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
+ K D++S GV+L L+ G D++ L V
Sbjct: 197 KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 234
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 99 LGEGGFGKVYKGCLEKIE-----QVVAIKQLDHRGVQGV-REFSAEV-MTLGSADHPNLV 151
LG G FG+V + I+ + VA+K L R +E+ + + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 152 KLIGYCAE-GDQRLLVYEYMPLGSLDKHLHDLRPDTRP------------LDWNTRMKIA 198
L+G C + G +++ E+ G+L +L R + P L + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM 258
++G+++L + I+RDL NILL E K+ DFGLA+
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 259 GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV+L E+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 99 LGEGGFGKVYKGCLEKIE-----QVVAIKQLDHRGVQGV-REFSAEV-MTLGSADHPNLV 151
LG G FG+V + I+ + VA+K L R +E+ + + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 152 KLIGYCAE-GDQRLLVYEYMPLGSLDKHLHDLRPDTRP------------LDWNTRMKIA 198
L+G C + G +++ E+ G+L +L R + P L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM 258
++G+++L + I+RDL NILL E K+ DFGLA+
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 259 GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV+L E+ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+L+ K+ DFGLA++ P D T T + T
Sbjct: 155 RGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 264
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 99 LGEGGFGKVYKGCLEKIE-----QVVAIKQLDHRGVQGV-REFSAEV-MTLGSADHPNLV 151
LG G FG+V + I+ + VA+K L R +E+ + + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 152 KLIGYCAE-GDQRLLVYEYMPLGSLDKHLHDLRPDTRP------------LDWNTRMKIA 198
L+G C + G +++ E+ G+L +L R + P L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM 258
++G+++L + I+RDL NILL E K+ DFGLA+
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 259 GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV+L E+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 29/217 (13%)
Query: 99 LGEGGFGKVYKGCLEKIE-----QVVAIKQLDHRGVQGV-REFSAEV-MTLGSADHPNLV 151
LG G FG+V + I+ + VA+K L R +E+ + + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 152 KLIGYCAE-GDQRLLVYEYMPLGSLDKHLHDLRPDTRP------------LDWNTRMKIA 198
L+G C + G +++ E+ G+L +L R + P L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV---ST 255
++G+++L + I+RDL NILL E K+ DFGLA+ D +V
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 212
Query: 256 RVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
R+ + AP+ T +SD++SFGV+L E+ +
Sbjct: 213 RL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 99 LGEGGFGKVYKGCLEKIE-----QVVAIKQLDHRGVQGV-REFSAEV-MTLGSADHPNLV 151
LG G FG+V + I+ + VA+K L R +E+ + + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 152 KLIGYCAE-GDQRLLVYEYMPLGSLDKHLHDLRPDTRP------------LDWNTRMKIA 198
L+G C + G +++ E+ G+L +L R + P L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM 258
++G+++L + I+RDL NILL E K+ DFGLA+
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 259 GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV+L E+ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 29/217 (13%)
Query: 99 LGEGGFGKVYKGCLEKIE-----QVVAIKQLDHRGVQGV-REFSAEV-MTLGSADHPNLV 151
LG G FG+V + I+ + VA+K L R +E+ + + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 152 KLIGYCAE-GDQRLLVYEYMPLGSLDKHLHDLRPDTRP------------LDWNTRMKIA 198
L+G C + G +++ E+ G+L +L R + P L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV---ST 255
++G+++L + I+RDL NILL E K+ DFGLA+ D +V
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 210
Query: 256 RVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
R+ + AP+ T +SD++SFGV+L E+ +
Sbjct: 211 RL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 29/217 (13%)
Query: 99 LGEGGFGKVYKGCLEKIE-----QVVAIKQLDHRGVQGV-REFSAEV-MTLGSADHPNLV 151
LG G FG+V + I+ + VA+K L R +E+ + + H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 152 KLIGYCAE-GDQRLLVYEYMPLGSLDKHLHDLRPDTRP------------LDWNTRMKIA 198
L+G C + G +++ E+ G+L +L R + P L + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV---ST 255
++G+++L + I+RDL NILL E K+ DFGLA+ D +V
Sbjct: 192 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 247
Query: 256 RVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
R+ + AP+ T +SD++SFGV+L E+ +
Sbjct: 248 RL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 29/217 (13%)
Query: 99 LGEGGFGKVYKGCLEKIE-----QVVAIKQLDHRGVQGV-REFSAEV-MTLGSADHPNLV 151
LG G FG+V + I+ + VA+K L R +E+ + + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 152 KLIGYCAE-GDQRLLVYEYMPLGSLDKHLHDLRPDTRP------------LDWNTRMKIA 198
L+G C + G +++ E+ G+L +L R + P L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV---ST 255
++G+++L + I+RDL NILL E K+ DFGLA+ D +V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 201
Query: 256 RVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
R+ + AP+ T +SD++SFGV+L E+ +
Sbjct: 202 RL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 29/206 (14%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLGSADHPNLVKLI 154
LG G FG+V ++ A+K LD + V +++ E L + + P LVKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ +V EY+ G + HL + + P + R AA +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL--- 160
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMG-TYGYC------APD 267
+IYRDLK N+L+++ + +++DFG AK RV G T+ C AP+
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK------------RVKGRTWXLCGTPEALAPE 208
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
++ D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 29/217 (13%)
Query: 99 LGEGGFGKVYKGCLEKIE-----QVVAIKQLDHRGVQGV-REFSAEV-MTLGSADHPNLV 151
LG G FG+V + I+ + VA+K L R +E+ + + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 152 KLIGYCAE-GDQRLLVYEYMPLGSLDKHLHDLRPDTRP------------LDWNTRMKIA 198
L+G C + G +++ E+ G+L +L R + P L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV---ST 255
++G+++L + I+RDL NILL E K+ DFGLA+ D +V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 201
Query: 256 RVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
R+ + AP+ T +SD++SFGV+L E+ +
Sbjct: 202 RL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 110/244 (45%), Gaps = 30/244 (12%)
Query: 66 NLKDDSNNSGK-SAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL 124
+L D S SG S PF A C+G+G +G+V++G + + VA+K
Sbjct: 13 DLLDHSCTSGSGSGLPFLVQRTVARQITLLE--CVGKGRYGEVWRGSWQG--ENVAVKIF 68
Query: 125 DHRGVQG-VREFSAEVMTLGSADHPNLVKLIGYCA----EGDQRLLVYEYMPLGSLDKHL 179
R + RE E+ H N++ I Q L+ Y +GSL +L
Sbjct: 69 SSRDEKSWFRE--TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL 126
Query: 180 HDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL-----KQPVIYRDLKCSNILLEEGYHP 234
LD + ++I + GL +LH ++ K + +RDLK NIL+++
Sbjct: 127 Q-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQC 181
Query: 235 KLSDFGLAKM-GPSGDKTHVSTRV-MGTYGYCAPDYA-MTGQL-TFKS----DIYSFGVV 286
++D GLA M S ++ V +GT Y AP+ T Q+ F S DI++FG+V
Sbjct: 182 CIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLV 241
Query: 287 LLEL 290
L E+
Sbjct: 242 LWEV 245
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYC- 157
L E G+++KG + + VV + ++ + R+F+ E L HPN++ ++G C
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 158 -AEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
L+ +MP GSL LH+ +D + +K A +RG+ +LH +P+
Sbjct: 78 SPPAPHPTLITHWMPYGSLYNVLHEG--TNFVVDQSQAVKFALDMARGMAFLHTL--EPL 133
Query: 217 IYRD-LKCSNILLEEGYHPKLS--DFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM--- 270
I R L +++++E ++S D + P M + AP+
Sbjct: 134 IPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR---------MYAPAWVAPEALQKKP 184
Query: 271 --TGQLTFKSDIYSFGVVLLELIT 292
T + + +D++SF V+L EL+T
Sbjct: 185 EDTNRRS--ADMWSFAVLLWELVT 206
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 38/223 (17%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD---HRGVQGVREFSAEVMTLGS-ADHPNLVKLI 154
LG+G +G V+K + +VVA+K++ R F E+M L + H N+V L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 155 GYCAEGDQR--LLVYEYMPLGSLDKHLHD-LRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
+ R LV++YM + LH +R + L+ + + + ++YLH
Sbjct: 76 NVLRADNDRDVYLVFDYM-----ETDLHAVIRANI--LEPVHKQYVVYQLIKVIKYLHSG 128
Query: 212 LKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPS-------------------GDKTH 252
+++RD+K SNILL H K++DFGL++ + D
Sbjct: 129 ---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 253 VSTRVMGTYGYCAPDYAM-TGQLTFKSDIYSFGVVLLELITGR 294
+ T + T Y AP+ + + + T D++S G +L E++ G+
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 248
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 8/198 (4%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVRE--FSAEVMTLGSADHPNLVKLIGY 156
+G G +G+ K + +++ K+LD+ + + +EV L HPN+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 157 CAEGDQRLL--VYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK- 213
+ L V EY G L + + + LD +++ + L+ H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 214 -QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTG 272
V++RDLK +N+ L+ + KL DFGLA++ T + +GT Y +P+
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKTFVGTPYYMSPEQMNRM 191
Query: 273 QLTFKSDIYSFGVVLLEL 290
KSDI+S G +L EL
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMG-PSGDKTHVSTRVMGTY 261
RGL+Y+H V++RDLK SN+LL K+ DFGLA++ P D T + T
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + + KS DI+S G +L E+++ R +LN + +L
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 249
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 26/210 (12%)
Query: 99 LGEGGFGKVYKGCLEKI-------EQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
LG+G F K++KG ++ E V +K LD F + H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
G C GD+ +LV E++ GSLD + L+ + ++ ++++A + + +L E
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTY---LKKNKNCINILWKLEVAKQLAAAMHFLEEN 132
Query: 212 LKQPVIYRDLKCSNILL------EEGYHP--KLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
+I+ ++ NILL + G P KLSD G++ D + R+
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI--LQERIPWVPPE 187
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
C + L +D +SFG L E+ +G
Sbjct: 188 CIEN---PKNLNLATDKWSFGTTLWEICSG 214
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 8/198 (4%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVRE--FSAEVMTLGSADHPNLVKLIGY 156
+G G +G+ K + +++ K+LD+ + + +EV L HPN+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 157 CAEGDQRLL--VYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK- 213
+ L V EY G L + + + LD +++ + L+ H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 214 -QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTG 272
V++RDLK +N+ L+ + KL DFGLA++ T + +GT Y +P+
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKAFVGTPYYMSPEQMNRM 191
Query: 273 QLTFKSDIYSFGVVLLEL 290
KSDI+S G +L EL
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 15/225 (6%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRG--VQGVREFSAEVMTLGSADHPNLVK--- 152
+G G +G V Q VAIK++ + V + E+ L H N++
Sbjct: 61 TIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 120
Query: 153 -LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L G+ + + Y+ L ++ LH + ++PL RGL+Y+H
Sbjct: 121 ILRPTVPYGEFKSV---YVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH-- 175
Query: 212 LKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK--MGPSGDKTHVSTRVMGTYGYCAPDYA 269
VI+RDLK SN+L+ E K+ DFG+A+ + + T + T Y AP+
Sbjct: 176 -SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 234
Query: 270 MT-GQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
++ + T D++S G + E++ R+ +L L+ +L
Sbjct: 235 LSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVL 279
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 104/255 (40%), Gaps = 49/255 (19%)
Query: 90 TGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPN 149
+F LG+G FG+V K + AIK++ H + + +EV L S +H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVXLLASLNHQY 63
Query: 150 LVKLIGYCAEGDQRLLV---------------YEYMPLGSLDKHLHDLRPDT-RPLDWNT 193
+V+ Y A ++R V EY +L +H + R W
Sbjct: 64 VVRY--YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 194 RMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK---------- 243
+I L Y+H Q +I+R+LK NI ++E + K+ DFGLAK
Sbjct: 122 FRQIL----EALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 244 -----MGPSGDKTHVSTRVMGTYGYCAPDYA-MTGQLTFKSDIYSFGVVLLELI----TG 293
+ S D T +GT Y A + TG K D YS G++ E I TG
Sbjct: 175 LDSQNLPGSSDNL---TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTG 231
Query: 294 RKAIDQTKDRKELNL 308
+ ++ K + +++
Sbjct: 232 XERVNILKKLRSVSI 246
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 31/219 (14%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG-VREFSAEVMTLGSADHPNLVKLIGY 156
C+G+G +G+V++G + VA+K R Q RE E+ H N++ I
Sbjct: 15 CVGKGRYGEVWRGLWHG--ESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNILGFIAS 70
Query: 157 CA----EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
Q L+ Y GSL L + L+ + +++A A+ GL +LH ++
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQ-----RQTLEPHLALRLAVSAACGLAHLHVEI 125
Query: 213 -----KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSG-DKTHVSTRV-MGTYGYCA 265
K + +RD K N+L++ ++D GLA M G D + +GT Y A
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMA 185
Query: 266 PDYAMTGQL---TFKS----DIYSFGVVLLELITGRKAI 297
P+ + Q+ F+S DI++FG+VL E+ R+ I
Sbjct: 186 PE-VLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTI 221
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 15/224 (6%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRG--VQGVREFSAEVMTLGSADHPNLVK---- 152
+G G +G V Q VAIK++ + V + E+ L H N++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
L G+ + + Y+ L ++ LH + ++PL RGL+Y+H
Sbjct: 123 LRPTVPYGEFKSV---YVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ 179
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAK--MGPSGDKTHVSTRVMGTYGYCAPDYAM 270
VI+RDLK SN+L+ E K+ DFG+A+ + + T + T Y AP+ +
Sbjct: 180 ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 236
Query: 271 T-GQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
+ + T D++S G + E++ R+ +L L+ +L
Sbjct: 237 SLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVL 280
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 24/207 (11%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVRE---FSAEVMTLGSADHPNLVKLI 154
+G G FG+V + ++V A+K L + + F E + A+ P +V+L
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL- 140
Query: 155 GYCAEGDQRLL--VYEYMPLGSLDKHLHDLR-PDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
+CA D + L V EYMP G L + + P+ + + +A A + +H
Sbjct: 141 -FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIH-- 197
Query: 212 LKQPVIYRDLKCSNILLEEGYHPKLSDFGLA-KMGPSGDKTHVSTRVMGTYGYCAPDYAM 270
RD+K N+LL++ H KL+DFG KM +G H T V GT Y +P+
Sbjct: 198 -------RDVKPDNMLLDKHGHLKLADFGTCMKMDETG-MVHCDTAV-GTPDYISPEVLK 248
Query: 271 T----GQLTFKSDIYSFGVVLLELITG 293
+ G + D +S GV L E++ G
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 26/210 (12%)
Query: 99 LGEGGFGKVYKGCLEKI-------EQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLV 151
LG+G F K++KG ++ E V +K LD F + H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
G C GD+ +LV E++ GSLD + L+ + ++ ++++A + + +L E
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTY---LKKNKNCINILWKLEVAKQLAWAMHFLEEN 132
Query: 212 LKQPVIYRDLKCSNILL------EEGYHP--KLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
+I+ ++ NILL + G P KLSD G++ D + R+
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI--LQERIPWVPPE 187
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
C + L +D +SFG L E+ +G
Sbjct: 188 CIEN---PKNLNLATDKWSFGTTLWEICSG 214
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 29/212 (13%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG-VREFSAEVMTLGSADHPNLVKLIGY 156
C+G+G +G+V++G + + VA+K R + RE E+ H N++ I
Sbjct: 15 CVGKGRYGEVWRGSWQG--ENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIAS 70
Query: 157 CA----EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
Q L+ Y +GSL +L DT ++I + GL +LH ++
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEI 125
Query: 213 -----KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKM-GPSGDKTHV--STRVMGTYGYC 264
K + +RDLK NIL+++ ++D GLA M S ++ V + RV GT Y
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYM 184
Query: 265 APDYA-MTGQL-TFKS----DIYSFGVVLLEL 290
AP+ T Q+ F S DI++FG+VL E+
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 29/212 (13%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG-VREFSAEVMTLGSADHPNLVKLIGY 156
C+G+G +G+V++G + + VA+K R + RE E+ H N++ I
Sbjct: 15 CVGKGRYGEVWRGSWQG--ENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIAS 70
Query: 157 CA----EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
Q L+ Y +GSL +L DT ++I + GL +LH ++
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEI 125
Query: 213 -----KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKM-GPSGDKTHV--STRVMGTYGYC 264
K + +RDLK NIL+++ ++D GLA M S ++ V + RV GT Y
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYM 184
Query: 265 APDYA-MTGQL-TFKS----DIYSFGVVLLEL 290
AP+ T Q+ F S DI++FG+VL E+
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 74 SGKSAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVR 133
SG+ F + R L EGGF VY+ + A+K+L + R
Sbjct: 11 SGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNR 70
Query: 134 EFSAEVMTLGS-ADHPNLVKLIGYCA-------EGDQRLLVYEYMPLGSLDKHLHDLRPD 185
EV + + HPN+V+ + G L+ + G L + L + +
Sbjct: 71 AIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKM--E 128
Query: 186 TR-PLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLA 242
+R PL +T +KI R +Q++H Q K P+I+RDLK N+LL KL DFG A
Sbjct: 129 SRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 147 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 198
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+ L+
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL----- 153
LG GG G V+ ++ VAIK++ Q V+ E+ + DH N+VK+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 154 ---------IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRG 204
+G E + +V EYM + L ++ L+ + R+ RG
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYM-----ETDLANVLEQGPLLEEHARL-FMYQLLRG 132
Query: 205 LQYLHEQLKQPVIYRDLKCSNILLE-EGYHPKLSDFGLAK-MGPS-GDKTHVSTRVMGTY 261
L+Y+H V++RDLK +N+ + E K+ DFGLA+ M P K H+S ++ T
Sbjct: 133 LKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TK 188
Query: 262 GYCAPDYAMT-GQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y +P ++ T D+++ G + E++TG+ + +++ L+
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGVQGVREFSA--EVMTLGSADHPNLVK 152
+GEG +G V+K + ++VA+K++ D GV SA E+ L H N+V+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPS----SALREICLLKELKHKNIVR 65
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
L + LV+E+ L K+ D LD +GL + H +
Sbjct: 66 LHDVLHSDKKLTLVFEFCD-QDLKKYFDSCNGD---LDPEIVKSFLFQLLKGLGFCHSR- 120
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTG 272
V++RDLK N+L+ KL+DFGLA+ G + + T Y PD
Sbjct: 121 --NVLHRDLKPQNLLINRNGELKLADFGLARA--FGIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 273 QLTFKS-DIYSFGVVLLELITGRKAI 297
+L S D++S G + EL + +
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 8/198 (4%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVRE--FSAEVMTLGSADHPNLVKLIGY 156
+G G +G+ K + +++ K+LD+ + + +EV L HPN+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 157 CAEGDQRLL--VYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK- 213
+ L V EY G L + + + LD +++ + L+ H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 214 -QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTG 272
V++RDLK +N+ L+ + KL DFGLA++ + + +GT Y +P+
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED--FAKEFVGTPYYMSPEQMNRM 191
Query: 273 QLTFKSDIYSFGVVLLEL 290
KSDI+S G +L EL
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 135 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 186
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 234
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 207
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+ L+
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 259
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 147 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 198
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 146 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 197
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 245
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 159 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 210
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+ L+
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 262
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 194
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 134 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 185
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 233
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 206
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+ L+
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 258
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 159 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----W 210
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 207
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+ L+
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 259
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 133 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 184
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 133 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 184
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 206
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+ L+
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 258
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSA-EVMTLGSADHPNLVKLIGY 156
+GEG +G VYK + A+K++ + +G+ + E+ L H N+VKL
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP-LDWNTRMKIAAGASRGLQYLHEQLKQP 215
+ +LV+E+ LD+ L L L+ T G+ Y H++
Sbjct: 69 IHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---R 120
Query: 216 VIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM-TGQL 274
V++RDLK N+L+ K++DFGLA+ G T + T Y APD M + +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARA--FGIPVRKYTHEIVTLWYRAPDVLMGSKKY 178
Query: 275 TFKSDIYSFGVVLLELITG 293
+ DI+S G + E++ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 11/197 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G FG V++ A K + E+ T+ HP LV L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+ ++ +++YE+M G L + + D + + + ++ +GL ++HE ++
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVH 172
Query: 219 RDLKCSNILL--EEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTF 276
DLK NI+ + KL DFGL V+T GT + AP+ A + +
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGY 229
Query: 277 KSDIYSFGVVLLELITG 293
+D++S GV+ L++G
Sbjct: 230 YTDMWSVGVLSYILLSG 246
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 22/206 (10%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVRE---FSAEVMTLGSADHPNLVKLI 154
+G G FG+V + +V A+K L + + F E + A+ P +V+L
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135
Query: 155 GYCAEGDQRL-LVYEYMPLGSLDKHLHDLR-PDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
Y + D+ L +V EYMP G L + + P+ + + +A A + ++H
Sbjct: 136 -YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH--- 191
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLA-KMGPSGDKTHVSTRVMGTYGYCAPDYAMT 271
RD+K N+LL++ H KL+DFG KM G T V GT Y +P+ +
Sbjct: 192 ------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAV-GTPDYISPEVLKS 243
Query: 272 ----GQLTFKSDIYSFGVVLLELITG 293
G + D +S GV L E++ G
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 22/206 (10%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVRE---FSAEVMTLGSADHPNLVKLI 154
+G G FG+V + +V A+K L + + F E + A+ P +V+L
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 155 GYCAEGDQRL-LVYEYMPLGSLDKHLHDLR-PDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
Y + D+ L +V EYMP G L + + P+ + + +A A + ++H
Sbjct: 141 -YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH--- 196
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGL-AKMGPSGDKTHVSTRVMGTYGYCAPDYAMT 271
RD+K N+LL++ H KL+DFG KM G T V GT Y +P+ +
Sbjct: 197 ------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAV-GTPDYISPEVLKS 248
Query: 272 ----GQLTFKSDIYSFGVVLLELITG 293
G + D +S GV L E++ G
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSA-EVMTLGSADHPNLVKLIGY 156
+GEG +G VYK + A+K++ + +G+ + E+ L H N+VKL
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP-LDWNTRMKIAAGASRGLQYLHEQLKQP 215
+ +LV+E+ LD+ L L L+ T G+ Y H++
Sbjct: 69 IHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---R 120
Query: 216 VIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM-TGQL 274
V++RDLK N+L+ K++DFGLA+ G T + T Y APD M + +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARA--FGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 275 TFKSDIYSFGVVLLELITG 293
+ DI+S G + E++ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 18/232 (7%)
Query: 90 TGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDH--RGVQGVREFSAEVMTLGSADH 147
+ +F+ LGEG +G V + ++VAIK+++ + + +R E+ L H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 148 PNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
N++ + Y+ + LH + T+ L + R ++
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKV 127
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKM---------GPSGDKTHVSTRVM 258
LH VI+RDLK SN+L+ K+ DFGLA++ P+G ++ + T +
Sbjct: 128 LH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM-TEXV 183
Query: 259 GTYGYCAPDYAMT-GQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
T Y AP+ +T + + D++S G +L EL R R +L L+
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI 235
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD-HRGVQGVREFSA-EVMTLGSADHPNLVKLIGY 156
+GEG +G VYK + A+K++ + +G+ + E+ L H N+VKL
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRP-LDWNTRMKIAAGASRGLQYLHEQLKQP 215
+ +LV+E+ LD+ L L L+ T G+ Y H++
Sbjct: 69 IHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---R 120
Query: 216 VIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAM-TGQL 274
V++RDLK N+L+ K++DFGLA+ G T + T Y APD M + +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARA--FGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 275 TFKSDIYSFGVVLLELITG 293
+ DI+S G + E++ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 22/206 (10%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVRE---FSAEVMTLGSADHPNLVKLI 154
+G G FG+V + +V A+K L + + F E + A+ P +V+L
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 155 GYCAEGDQRL-LVYEYMPLGSLDKHLHDLR-PDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
Y + D+ L +V EYMP G L + + P+ + + +A A + ++H
Sbjct: 141 -YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH--- 196
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLA-KMGPSGDKTHVSTRVMGTYGYCAPDYAMT 271
RD+K N+LL++ H KL+DFG KM G T V GT Y +P+ +
Sbjct: 197 ------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAV-GTPDYISPEVLKS 248
Query: 272 ----GQLTFKSDIYSFGVVLLELITG 293
G + D +S GV L E++ G
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 18/232 (7%)
Query: 90 TGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDH--RGVQGVREFSAEVMTLGSADH 147
+ +F+ LGEG +G V + ++VAIK+++ + + +R E+ L H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 148 PNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
N++ + Y+ + LH + T+ L + R ++
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKV 127
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKM---------GPSGDKTHVSTRVM 258
LH VI+RDLK SN+L+ K+ DFGLA++ P+G ++ + T +
Sbjct: 128 LH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM-TEYV 183
Query: 259 GTYGYCAPDYAMT-GQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
T Y AP+ +T + + D++S G +L EL R R +L L+
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI 235
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 17/209 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHR-GVQGVREFSAEVMTLGSADHPNLVKLIGYC 157
LGEG F K +K Q A+K + R +E +A + G HPN+VKL
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG---HPNIVKLHEVF 75
Query: 158 AEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVI 217
+ LV E + G L + + + + K+ + S ++H+ V+
Sbjct: 76 HDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVS----HMHDV---GVV 128
Query: 218 YRDLKCSNILL---EEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+RDLK N+L + K+ DFG A++ P D + T T Y AP+
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKTPCF-TLHYAAPELLNQNGY 186
Query: 275 TFKSDIYSFGVVLLELITGRKAIDQTKDR 303
D++S GV+L +++G+ Q+ DR
Sbjct: 187 DESCDLWSLGVILYTMLSGQVPF-QSHDR 214
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 11/197 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G FG V++ A K + E+ T+ HP LV L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+ ++ +++YE+M G L + + D + + + ++ +GL ++HE ++
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVH 278
Query: 219 RDLKCSNILL--EEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTF 276
DLK NI+ + KL DFGL V+T GT + AP+ A + +
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGY 335
Query: 277 KSDIYSFGVVLLELITG 293
+D++S GV+ L++G
Sbjct: 336 YTDMWSVGVLSYILLSG 352
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG-VREFSAEVMTLGSADHPNLVKLIGY- 156
+G+G FG+V++G E VA+K R + RE AE+ H N++ I
Sbjct: 12 IGKGRFGEVWRGKWRGEE--VAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAAD 67
Query: 157 ---CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL- 212
Q LV +Y GSL +L+ + +K+A + GL +LH ++
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIV 122
Query: 213 ----KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT--HVSTRVMGTYGYCAP 266
K + +RDLK NIL+++ ++D GLA S T +GT Y AP
Sbjct: 123 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 182
Query: 267 DYA-----MTGQLTFK-SDIYSFGVVLLEL 290
+ M +FK +DIY+ G+V E+
Sbjct: 183 EVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG-VREFSAEVMTLGSADHPNLVKLIGY- 156
+G+G FG+V++G E VA+K R + RE AE+ H N++ I
Sbjct: 11 IGKGRFGEVWRGKWRGEE--VAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAAD 66
Query: 157 ---CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL- 212
Q LV +Y GSL +L+ + +K+A + GL +LH ++
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIV 121
Query: 213 ----KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT--HVSTRVMGTYGYCAP 266
K + +RDLK NIL+++ ++D GLA S T +GT Y AP
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 181
Query: 267 DYA-----MTGQLTFK-SDIYSFGVVLLEL 290
+ M +FK +DIY+ G+V E+
Sbjct: 182 EVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ V+TR
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 183
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 14/216 (6%)
Query: 93 FRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVRE-FSAEVMTLGSADHPNLV 151
F LG G F +V + ++ A+K + + ++G E+ L H N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L + LV + + G L + + T D +T ++ A + YLH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEK-DASTLIRQVLDA---VYYLH-- 137
Query: 212 LKQPVIYRDLKCSNILL---EEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY 268
+ +++RDLK N+L +E +SDFGL+KM GD V + GT GY AP+
Sbjct: 138 -RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGTPGYVAPEV 193
Query: 269 AMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRK 304
+ D +S GV+ L+ G D K
Sbjct: 194 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSK 229
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ V+TR
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----W 207
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+ L+
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 259
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 109/252 (43%), Gaps = 36/252 (14%)
Query: 67 LKDDSNNSG-----------KSAKPFT--FDELAAATGNFRSDCCLGEGGFGKVYKGCLE 113
L D+ NNS + AKPFT ++ +F +G G FG+V L+
Sbjct: 37 LYDECNNSPLRREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLK 96
Query: 114 KIEQVVAIKQLDHRGVQGVRE---FSAEVMTLGSADHPNLVKLIGYCAEGDQRL-LVYEY 169
++V A+K L+ + E F E L + D + + Y + D L LV +Y
Sbjct: 97 NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS-KWITTLHYAFQDDNNLYLVMDY 155
Query: 170 MPLG---SLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNI 226
G +L D P+ + M IA + L Y+H RD+K NI
Sbjct: 156 YVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH---------RDIKPDNI 206
Query: 227 LLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY--AMT---GQLTFKSDIY 281
L++ H +L+DFG + + D T S+ +GT Y +P+ AM G+ + D +
Sbjct: 207 LMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWW 265
Query: 282 SFGVVLLELITG 293
S GV + E++ G
Sbjct: 266 SLGVCMYEMLYG 277
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG-VREFSAEVMTLGSADHPNLVKLIGY- 156
+G+G FG+V++G E VA+K R + RE AE+ H N++ I
Sbjct: 17 IGKGRFGEVWRGKWRGEE--VAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAAD 72
Query: 157 ---CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL- 212
Q LV +Y GSL +L+ + +K+A + GL +LH ++
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIV 127
Query: 213 ----KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT--HVSTRVMGTYGYCAP 266
K + +RDLK NIL+++ ++D GLA S T +GT Y AP
Sbjct: 128 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 187
Query: 267 DYA-----MTGQLTFK-SDIYSFGVVLLEL 290
+ M +FK +DIY+ G+V E+
Sbjct: 188 EVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ D+GLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG-VREFSAEVMTLGSADHPNLVKLIGY- 156
+G+G FG+V++G E VA+K R + RE AE+ H N++ I
Sbjct: 14 IGKGRFGEVWRGKWRGEE--VAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAAD 69
Query: 157 ---CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL- 212
Q LV +Y GSL +L+ + +K+A + GL +LH ++
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIV 124
Query: 213 ----KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT--HVSTRVMGTYGYCAP 266
K + +RDLK NIL+++ ++D GLA S T +GT Y AP
Sbjct: 125 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 184
Query: 267 DYA-----MTGQLTFK-SDIYSFGVVLLEL 290
+ M +FK +DIY+ G+V E+
Sbjct: 185 EVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGLA+ +V+TR
Sbjct: 165 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 216
Query: 263 YCAPDYAMTG-QLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + DI+S G ++ EL+TGR T +L +
Sbjct: 217 YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQI 264
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG-VREFSAEVMTLGSADHPNLVKLIGY- 156
+G+G FG+V++G E VA+K R + RE AE+ H N++ I
Sbjct: 37 IGKGRFGEVWRGKWRGEE--VAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAAD 92
Query: 157 ---CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL- 212
Q LV +Y GSL +L+ + +K+A + GL +LH ++
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIV 147
Query: 213 ----KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT--HVSTRVMGTYGYCAP 266
K + +RDLK NIL+++ ++D GLA S T +GT Y AP
Sbjct: 148 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 207
Query: 267 DYA-----MTGQLTFK-SDIYSFGVVLLEL 290
+ M +FK +DIY+ G+V E+
Sbjct: 208 EVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVM----TLGSADHPNLVKLI 154
LG G +G V K Q++A+K++ R +E +M ++ + D P V
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 116
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
G + E M SLDK + + + + KIA + L++LH +L
Sbjct: 117 GALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS- 174
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
VI+RD+K SN+L+ K+ DFG++ G D T G Y AP+ + +L
Sbjct: 175 -VIHRDVKPSNVLINALGQVKMCDFGIS--GYLVDSV-AKTIDAGCKPYMAPE-RINPEL 229
Query: 275 -----TFKSDIYSFGVVLLELITGRKAID 298
+ KSDI+S G+ ++EL R D
Sbjct: 230 NQKGYSVKSDIWSLGITMIELAILRFPYD 258
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DFGL + +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG-VREFSAEVMTLGSADHPNLVKLIGY- 156
+G+G FG+V++G E VA+K R + RE AE+ H N++ I
Sbjct: 50 IGKGRFGEVWRGKWRGEE--VAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAAD 105
Query: 157 ---CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL- 212
Q LV +Y GSL +L+ + +K+A + GL +LH ++
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIV 160
Query: 213 ----KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKT--HVSTRVMGTYGYCAP 266
K + +RDLK NIL+++ ++D GLA S T +GT Y AP
Sbjct: 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 220
Query: 267 DYA-----MTGQLTFK-SDIYSFGVVLLEL 290
+ M +FK +DIY+ G+V E+
Sbjct: 221 EVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 22/211 (10%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHP 148
+ S +G G +G V ++ + VAIK+L R Q + E++ L H
Sbjct: 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-RPFQSEIFAKRAYRELLLLKHMQHE 83
Query: 149 NLVKLIGYCAEGDQRLLVYEY---MPLGSLD-KHLHDLRPDTRPLDWNTRMKIAAGASRG 204
N++ L+ Y++ MP D + + L+ + + + +G
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKG 138
Query: 205 LQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYC 264
L+Y+H V++RDLK N+ + E K+ DFGLA+ + +V TR Y
Sbjct: 139 LKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYR 190
Query: 265 APDYAMTGQLTFKS-DIYSFGVVLLELITGR 294
AP+ ++ ++ DI+S G ++ E++TG+
Sbjct: 191 APEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGVQGVREFSA--EVMTLGSADHPNLVK 152
+GEG +G V+K + ++VA+K++ D GV SA E+ L H N+V+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPS----SALREICLLKELKHKNIVR 65
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
L + LV+E+ L K+ D LD +GL + H +
Sbjct: 66 LHDVLHSDKKLTLVFEFCD-QDLKKYFDSCNGD---LDPEIVKSFLFQLLKGLGFCHSR- 120
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTG 272
V++RDLK N+L+ KL++FGLA+ G + + T Y PD
Sbjct: 121 --NVLHRDLKPQNLLINRNGELKLANFGLARA--FGIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 273 QLTFKS-DIYSFGVVLLELITGRKAI 297
+L S D++S G + EL + +
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 29/213 (13%)
Query: 99 LGEGGFGKVYKGCLEKI-EQVVAIKQLDHR-GVQGVREFSAEVMTLGSADHPNLVKLIGY 156
LGEG +V + C+ I Q A+K ++ + G R F M H N+++LI +
Sbjct: 21 LGEGAHARV-QTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
E D+ LV+E M GS+ H+H R L+ + ++ A A L +LH + +
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIHKRR-HFNELEASVVVQDVASA---LDFLH---NKGI 132
Query: 217 IYRDLKCSNILLEEGYHP------KLSDFGLAK-MGPSGDKTHVSTRVM----GTYGYCA 265
+RDLK NIL E HP K+ DFGL + +GD + +ST + G+ Y A
Sbjct: 133 AHRDLKPENILCE---HPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 266 PDY--AMTGQLTF---KSDIYSFGVVLLELITG 293
P+ A + + + + D++S GV+L L++G
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 36/213 (16%)
Query: 91 GNFRSDCCLGEGGFGKVYKGCLEKIE-QVVAIKQLDHRG-------VQGVREFSAEVMTL 142
G + C+ GG G +Y + + V +K L H G R+F AEV+
Sbjct: 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVV-- 137
Query: 143 GSADHPNLVKLIGYCAEGDQR-----LLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKI 197
HP++V++ + D+ +V EY+ SL + P + + +
Sbjct: 138 ----HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILP 193
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
A L YLH ++Y DLK NI+L E KL D G + + +
Sbjct: 194 A------LSYLH---SIGLVYNDLKPENIMLTE-EQLKLIDLGAVS------RINSFGYL 237
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLEL 290
GT G+ AP+ TG T +DIY+ G L L
Sbjct: 238 YGTPGFQAPEIVRTGP-TVATDIYTVGRTLAAL 269
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 18/232 (7%)
Query: 90 TGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDH--RGVQGVREFSAEVMTLGSADH 147
+ +F+ LGEG +G V + ++VAIK+++ + + +R E+ L H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 148 PNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQY 207
N++ + Y+ + LH + T+ L + R ++
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKV 127
Query: 208 LHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKM---------GPSGDKTHVSTRVM 258
LH VI+RDLK SN+L+ K+ DFGLA++ P+G ++ + +
Sbjct: 128 LH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM-VEFV 183
Query: 259 GTYGYCAPDYAMT-GQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
T Y AP+ +T + + D++S G +L EL R R +L L+
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI 235
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 23/229 (10%)
Query: 78 AKPFT--FDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVRE- 134
AKPFT E+ +F +G G FG+V ++ E++ A+K L+ + E
Sbjct: 75 AKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAET 134
Query: 135 --FSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLG---SLDKHLHDLRPDTRPL 189
F E L + D + L + + LV +Y G +L D P+
Sbjct: 135 ACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR 194
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+ M +A + L Y+H RD+K N+LL+ H +L+DFG + + + D
Sbjct: 195 FYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFG-SCLKMNDD 244
Query: 250 KTHVSTRVMGTYGYCAPDY--AM---TGQLTFKSDIYSFGVVLLELITG 293
T S+ +GT Y +P+ AM G+ + D +S GV + E++ G
Sbjct: 245 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 20/205 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLVK 152
LG G F V K + + A K + R + R E EV L HPN++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
L +L+ E + G L D + L + + G+ YLH
Sbjct: 73 LHDIFENKTDVVLILELVSGGEL----FDFLAEKESLTEDEATQFLKQILDGVHYLH--- 125
Query: 213 KQPVIYRDLKCSNILLEEGYHP----KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY 268
+ + + DLK NI+L + P KL DFG+A +G++ + GT + AP+
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEI 182
Query: 269 AMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 183 VNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 23/229 (10%)
Query: 78 AKPFT--FDELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVRE- 134
AKPFT E+ +F +G G FG+V ++ E++ A+K L+ + E
Sbjct: 59 AKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAET 118
Query: 135 --FSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLG---SLDKHLHDLRPDTRPL 189
F E L + D + L + + LV +Y G +L D P+
Sbjct: 119 ACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR 178
Query: 190 DWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+ M +A + L Y+H RD+K N+LL+ H +L+DFG + + + D
Sbjct: 179 FYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFG-SCLKMNDD 228
Query: 250 KTHVSTRVMGTYGYCAPDY--AM---TGQLTFKSDIYSFGVVLLELITG 293
T S+ +GT Y +P+ AM G+ + D +S GV + E++ G
Sbjct: 229 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 89/223 (39%), Gaps = 27/223 (12%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVRE-FSAEVMTLGSADHPNL 150
+F CLG GGFG V++ + + AIK++ + RE EV L +HP +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 151 VKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDW-NTR-----------MKIA 198
V+ E + + P L + R + DW N R + I
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLK-DWMNGRCTIEERERSVCLHIF 124
Query: 199 AGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVM 258
+ +++LH + +++RDLK SNI K+ DFGL ++ M
Sbjct: 125 LQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 259 GTYG----------YCAPDYAMTGQLTFKSDIYSFGVVLLELI 291
Y Y +P+ + K DI+S G++L EL+
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 84 DELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAE-VMTL 142
+E+ AT R LG G FG+V++ ++ A+K++ + F AE +M
Sbjct: 90 EEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVR------LEVFRAEELMAC 139
Query: 143 GSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHD--LRPDTRPLDWNTRMKIAAG 200
P +V L G EG + E + GSL + + + P+ R L + +
Sbjct: 140 AGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQ------ 193
Query: 201 ASRGLQYLHEQLKQPVIYRDLKCSNILLE-EGYHPKLSDFGLAK-MGPSGDKTHVST--R 256
A GL+YLH + +++ D+K N+LL +G H L DFG A + P G + T
Sbjct: 194 ALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY 250
Query: 257 VMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
+ GT + AP+ + K D++S ++L ++ G
Sbjct: 251 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 20/205 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLVK 152
LG G F V K + + A K + R + R E EV L HPN++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
L +L+ E + G L D + L + + G+ YLH
Sbjct: 80 LHDIFENKTDVVLILELVSGGEL----FDFLAEKESLTEDEATQFLKQILDGVHYLH--- 132
Query: 213 KQPVIYRDLKCSNILLEEGYHP----KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY 268
+ + + DLK NI+L + P KL DFG+A +G++ + GT + AP+
Sbjct: 133 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEI 189
Query: 269 AMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 25/211 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSAD-HPNLVKLIGYC 157
LGEG + KV + + A+K ++ + EV TL + N+++LI +
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 158 AEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTR--MKIAAGASRGLQYLHEQLKQP 215
+ + LV+E + GS+ H+ + +N R ++ + L +LH +
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHIQKQK------HFNEREASRVVRDVAAALDFLH---TKG 131
Query: 216 VIYRDLKCSNILLE--EGYHP-KLSDFGLAK-MGPSGDKTHVSTRVM----GTYGYCAPD 267
+ +RDLK NIL E E P K+ DF L M + T ++T + G+ Y AP+
Sbjct: 132 IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPE 191
Query: 268 Y--AMTGQLTF---KSDIYSFGVVLLELITG 293
T Q TF + D++S GVVL +++G
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 84 DELAAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAE-VMTL 142
+E+ AT R LG G FG+V++ ++ A+K++ + F AE +M
Sbjct: 71 EEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVR------LEVFRAEELMAC 120
Query: 143 GSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHD--LRPDTRPLDWNTRMKIAAG 200
P +V L G EG + E + GSL + + + P+ R L + +
Sbjct: 121 AGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQ------ 174
Query: 201 ASRGLQYLHEQLKQPVIYRDLKCSNILLE-EGYHPKLSDFGLAK-MGPSGDKTHVST--R 256
A GL+YLH + +++ D+K N+LL +G H L DFG A + P G + T
Sbjct: 175 ALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY 231
Query: 257 VMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
+ GT + AP+ + K D++S ++L ++ G
Sbjct: 232 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 20/205 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLVK 152
LG G F V K + + A K + R + R E EV L HPN++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
L +L+ E + G L D + L + + G+ YLH
Sbjct: 94 LHDIFENKTDVVLILELVSGGEL----FDFLAEKESLTEDEATQFLKQILDGVHYLH--- 146
Query: 213 KQPVIYRDLKCSNILLEEGYHP----KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY 268
+ + + DLK NI+L + P KL DFG+A +G++ + GT + AP+
Sbjct: 147 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEI 203
Query: 269 AMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 204 VNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 83/188 (44%), Gaps = 19/188 (10%)
Query: 114 KIEQVVAIKQLDHRGVQGVREFSA-EVMTLGS-ADHPNLVKLIGYCAEGDQRLLVYEYMP 171
KI +V A ++L ++ VRE + E L A HP+++ LI LV++ M
Sbjct: 125 KIMEVTA-ERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMR 183
Query: 172 LGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEG 231
G L +L + L I + +LH +++RDLK NILL++
Sbjct: 184 KGELFDYL----TEKVALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDN 236
Query: 232 YHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ------LTFKSDIYSFGV 285
+LSDFG + G+K + GT GY AP+ + D+++ GV
Sbjct: 237 MQIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGV 293
Query: 286 VLLELITG 293
+L L+ G
Sbjct: 294 ILFTLLAG 301
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLV 151
LG G F V K C EK + A K + R + R + EV L HPN++
Sbjct: 19 LGSGQFA-VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L +L+ E + G L D + L + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 212 LKQPVIYRDLKCSNILLEEGYHPK----LSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+ + DLK NI+L + PK + DFGLA G++ + GT + AP+
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPAFVAPE 187
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 31/225 (13%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHR--GVQGVRE------FSAEVMTLGSADHPNL 150
LG G G+V K + VAIK + R + RE E+ L +HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 151 VKLIGYCAEGDQRLLVYEYMPLGSL-DKHLHD--LRPDTRPLDWNTRMKIAAGASRGLQY 207
+K+ + + + +V E M G L DK + + L+ T L + +M +A +QY
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLA------VQY 129
Query: 208 LHEQLKQPVIYRDLKCSNILL---EEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYC 264
LHE +I+RDLK N+LL EE K++DFG +K+ G+ + + T + GT Y
Sbjct: 130 LHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYL 183
Query: 265 APDYAM---TGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
AP+ + T D +S GV+L ++G + + + L
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 228
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 31/225 (13%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHR--GVQGVRE------FSAEVMTLGSADHPNL 150
LG G G+V K + VAIK + R + RE E+ L +HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 151 VKLIGYCAEGDQRLLVYEYMPLGSL-DKHLHD--LRPDTRPLDWNTRMKIAAGASRGLQY 207
+K+ + + + +V E M G L DK + + L+ T L + +M +A +QY
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLA------VQY 129
Query: 208 LHEQLKQPVIYRDLKCSNILL---EEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYC 264
LHE +I+RDLK N+LL EE K++DFG +K+ G+ + + T + GT Y
Sbjct: 130 LHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYL 183
Query: 265 APDYAM---TGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
AP+ + T D +S GV+L ++G + + + L
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 228
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ FGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 31/225 (13%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHR--GVQGVRE------FSAEVMTLGSADHPNL 150
LG G G+V K + VAIK + R + RE E+ L +HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 151 VKLIGYCAEGDQRLLVYEYMPLGSL-DKHLHD--LRPDTRPLDWNTRMKIAAGASRGLQY 207
+K+ + + + +V E M G L DK + + L+ T L + +M +A +QY
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLA------VQY 129
Query: 208 LHEQLKQPVIYRDLKCSNILL---EEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYC 264
LHE +I+RDLK N+LL EE K++DFG +K+ G+ + + T + GT Y
Sbjct: 130 LHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYL 183
Query: 265 APDYAM---TGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
AP+ + T D +S GV+L ++G + + + L
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 228
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 31/225 (13%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHR--GVQGVRE------FSAEVMTLGSADHPNL 150
LG G G+V K + VAIK + R + RE E+ L +HP +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 151 VKLIGYCAEGDQRLLVYEYMPLGSL-DKHLHD--LRPDTRPLDWNTRMKIAAGASRGLQY 207
+K+ + + + +V E M G L DK + + L+ T L + +M +A +QY
Sbjct: 77 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLA------VQY 128
Query: 208 LHEQLKQPVIYRDLKCSNILL---EEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYC 264
LHE +I+RDLK N+LL EE K++DFG +K+ G+ + + T + GT Y
Sbjct: 129 LHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYL 182
Query: 265 APDYAM---TGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
AP+ + T D +S GV+L ++G + + + L
Sbjct: 183 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 227
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 29/222 (13%)
Query: 99 LGEGGFGKV------YKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVK 152
LGEGGF V + G +++++ +Q D Q RE A++ L +HPN+++
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQ--RE--ADMHRL--FNHPNILR 90
Query: 153 LIGYC----AEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYL 208
L+ YC + L+ + G+L + L+ L + + + G RGL+ +
Sbjct: 91 LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 209 HEQLKQPVIYRDLKCSNILLEEGYHPKLSDFG---LAKMGPSGDKTHVSTRVMG----TY 261
H + +RDLK +NILL + P L D G A + G + ++ + T
Sbjct: 151 H---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 262 GYCAPD-YAMTGQLTF--KSDIYSFGVVLLELITGRKAIDQT 300
Y AP+ +++ ++D++S G VL ++ G D
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMV 249
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ DF LA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 90/214 (42%), Gaps = 29/214 (13%)
Query: 93 FRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHPN 149
+R +G G +G V + VAIK+L +R Q + E+ L H N
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKL-YRPFQSELFAKRAYRELRLLKHMRHEN 85
Query: 150 LVKLIGYCAEG---DQRLLVYEYMP-----LGSLDKHLHDLRPDTRPLDWNTRMKIAAGA 201
++ L+ D Y MP LG L KH L + +
Sbjct: 86 VIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH--------EKLGEDRIQFLVYQM 137
Query: 202 SRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTY 261
+GL+Y+H +I+RDLK N+ + E K+ DFGLA+ S V TR
Sbjct: 138 LKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR----- 189
Query: 262 GYCAPDYAMTG-QLTFKSDIYSFGVVLLELITGR 294
Y AP+ + + T DI+S G ++ E+ITG+
Sbjct: 190 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 31/225 (13%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHR--GVQGVRE------FSAEVMTLGSADHPNL 150
LG G G+V K + VAIK + R + RE E+ L +HP +
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 151 VKLIGYCAEGDQRLLVYEYMPLGSL-DKHLHD--LRPDTRPLDWNTRMKIAAGASRGLQY 207
+K+ + + + +V E M G L DK + + L+ T L + +M +A +QY
Sbjct: 84 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLA------VQY 135
Query: 208 LHEQLKQPVIYRDLKCSNILL---EEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYC 264
LHE +I+RDLK N+LL EE K++DFG +K+ G+ + + T + GT Y
Sbjct: 136 LHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYL 189
Query: 265 APDYAM---TGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
AP+ + T D +S GV+L ++G + + + L
Sbjct: 190 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 234
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 18/209 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVM----TLGSADHPNLVKLI 154
LG G +G V K Q++A+K++ R +E +M ++ + D P V
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 72
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
G + E M SLDK + + + + KIA + L++LH +L
Sbjct: 73 GALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS- 130
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
VI+RD+K SN+L+ K+ DFG++ + G Y AP+ + +L
Sbjct: 131 -VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA---GCKPYMAPE-RINPEL 185
Query: 275 -----TFKSDIYSFGVVLLELITGRKAID 298
+ KSDI+S G+ ++EL R D
Sbjct: 186 NQKGYSVKSDIWSLGITMIELAILRFPYD 214
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 105/225 (46%), Gaps = 31/225 (13%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHR--GVQGVRE------FSAEVMTLGSADHPNL 150
LG G G+V K + VAI+ + R + RE E+ L +HP +
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 151 VKLIGYCAEGDQRLLVYEYMPLGSL-DKHLHD--LRPDTRPLDWNTRMKIAAGASRGLQY 207
+K+ + + + +V E M G L DK + + L+ T L + +M +A +QY
Sbjct: 217 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLA------VQY 268
Query: 208 LHEQLKQPVIYRDLKCSNILL---EEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYC 264
LHE +I+RDLK N+LL EE K++DFG +K+ G+ + + T + GT Y
Sbjct: 269 LHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYL 322
Query: 265 APDYAM---TGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
AP+ + T D +S GV+L ++G + + + L
Sbjct: 323 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 367
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ D GLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 105/225 (46%), Gaps = 31/225 (13%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHR--GVQGVRE------FSAEVMTLGSADHPNL 150
LG G G+V K + VAI+ + R + RE E+ L +HP +
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 151 VKLIGYCAEGDQRLLVYEYMPLGSL-DKHLHD--LRPDTRPLDWNTRMKIAAGASRGLQY 207
+K+ + + + +V E M G L DK + + L+ T L + +M +A +QY
Sbjct: 203 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLA------VQY 254
Query: 208 LHEQLKQPVIYRDLKCSNILL---EEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYC 264
LHE +I+RDLK N+LL EE K++DFG +K+ G+ + + T + GT Y
Sbjct: 255 LHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYL 308
Query: 265 APDYAM---TGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKEL 306
AP+ + T D +S GV+L ++G + + + L
Sbjct: 309 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 353
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 82/206 (39%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLV 151
LG G F + K C EK + A K + R + R E EV L HPN++
Sbjct: 20 LGSGQFA-IVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII 78
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L +L+ E + G L D L G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLH-- 132
Query: 212 LKQPVIYRDLKCSNILLEEGY----HPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+ + + DLK NI+L + H KL DFGLA G + + GT + AP+
Sbjct: 133 -TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPE 188
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLV 151
LG G F V K C EK + A K + R + R + EV L HPN++
Sbjct: 19 LGSGQFA-VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L +L+ E + G L D + L + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 212 LKQPVIYRDLKCSNILLEEGYHPK----LSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+ + DLK NI+L + PK + DFGLA G++ + GT + AP+
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE 187
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 11/197 (5%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYC- 157
L E G+++KG + + VV + ++ + R+F+ E L HPN++ ++G C
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 158 -AEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
L+ + P GSL LH+ +D + +K A +RG +LH +P+
Sbjct: 78 SPPAPHPTLITHWXPYGSLYNVLHEG--TNFVVDQSQAVKFALDXARGXAFLHTL--EPL 133
Query: 217 IYRD-LKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLT 275
I R L ++ ++E ++S + S + + V P+
Sbjct: 134 IPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPEDTNRRS-- 191
Query: 276 FKSDIYSFGVVLLELIT 292
+D +SF V+L EL+T
Sbjct: 192 --ADXWSFAVLLWELVT 206
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 29/207 (14%)
Query: 99 LGEGGFGKVYKGC-----LEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL 153
LG+G F V + LE +++ K+L R Q + E HPN+V+L
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRKLQHPNIVRL 93
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL- 212
E LV++ + G +L D ++ + A AS +Q + E +
Sbjct: 94 HDSIQEESFHYLVFDLVTGG-------ELFEDIVAREFYSE----ADASHCIQQILESIA 142
Query: 213 ---KQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
+++R+LK N+LL +G KL+DFGLA + H GT GY +P
Sbjct: 143 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSP 199
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELITG 293
+ + DI++ GV+L L+ G
Sbjct: 200 EVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 22/211 (10%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHP 148
+ S +G G +G V ++ + VAIK+L R Q + E++ L H
Sbjct: 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-RPFQSEIFAKRAYRELLLLKHMQHE 101
Query: 149 NLVKLIGYCAEGDQRLLVYEY---MPLGSLD-KHLHDLRPDTRPLDWNTRMKIAAGASRG 204
N++ L+ Y++ MP D + + + + + + +G
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKG 156
Query: 205 LQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYC 264
L+Y+H V++RDLK N+ + E K+ DFGLA+ + +V TR Y
Sbjct: 157 LKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYR 208
Query: 265 APDYAMTGQLTFKS-DIYSFGVVLLELITGR 294
AP+ ++ ++ DI+S G ++ E++TG+
Sbjct: 209 APEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ D GLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 21/219 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGV---REFSAEVMTLGSADHPNLVKLIG 155
+G G +G V ++ Q VA+K+L R Q + R E+ L H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 156 YCAEGDQRLLVYE-YMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
E Y+ + L+++ D + + + RGL+Y+H
Sbjct: 95 VFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-LVYQLLRGLKYIH---SA 150
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK SN+ + E ++ DFGLA+ +V+TR Y AP+ +
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMH 205
Query: 275 TFKS-DIYSFGVVLLELITGRKA------IDQTKDRKEL 306
++ DI+S G ++ EL+ G+ IDQ K E+
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEV 244
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLV 151
LG G F V K C EK + A K + R + R + EV L HPN++
Sbjct: 19 LGSGQFA-VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L +L+ E + G L D + L + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 212 LKQPVIYRDLKCSNILLEEGYHPK----LSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+ + DLK NI+L + PK + DFGLA G++ + GT + AP+
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE 187
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYG 262
RGL+Y+H +I+RDLK SN+ + E K+ D GLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----W 187
Query: 263 YCAPDYAMTGQLTFKS-DIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
Y AP+ + ++ DI+S G ++ EL+TGR T +L L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 29/207 (14%)
Query: 99 LGEGGFGKVYKGC-----LEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL 153
LG+G F V + LE +++ K+L R Q + E HPN+V+L
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRKLQHPNIVRL 69
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL- 212
E LV++ + G +L D ++ + A AS +Q + E +
Sbjct: 70 HDSIQEESFHYLVFDLVTGG-------ELFEDIVAREFYSE----ADASHCIQQILESIA 118
Query: 213 ---KQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
+++R+LK N+LL +G KL+DFGLA + H GT GY +P
Sbjct: 119 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSP 175
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELITG 293
+ + DI++ GV+L L+ G
Sbjct: 176 EVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 16/225 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA--EVMTLGSADHPNLVKLIGY 156
+G+G FG+V+K K Q VA+K++ + +A E+ L H N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 157 C---AEGDQRLLVYEYMPLGSLDKHLHDLRPDTR-PLDWNTRMKIAAGASRGLQYLHEQL 212
C A R Y+ + L L + + ++ GL Y+H
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH--- 142
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAK---MGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ +++RD+K +N+L+ KL+DFGLA+ + + RV+ T Y P+
Sbjct: 143 RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPE-L 200
Query: 270 MTGQLTF--KSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWL 312
+ G+ + D++ G ++ E+ T + ++ +L L++ L
Sbjct: 201 LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 245
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLV 151
LG G F V K C EK + A K + R + R + EV L HPN++
Sbjct: 19 LGSGQFA-VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L +L+ E + G L D + L + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 212 LKQPVIYRDLKCSNILLEEGYHPK----LSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+ + DLK NI+L + PK + DFGLA G++ + GT + AP+
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPE 187
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 29/207 (14%)
Query: 99 LGEGGFGKVYKGC-----LEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL 153
LG+G F V + LE +++ K+L R Q + E HPN+V+L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRKLQHPNIVRL 70
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL- 212
E LV++ + G +L D ++ + A AS +Q + E +
Sbjct: 71 HDSIQEESFHYLVFDLVTGG-------ELFEDIVAREFYSE----ADASHCIQQILESIA 119
Query: 213 ---KQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
+++R+LK N+LL +G KL+DFGLA + H GT GY +P
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSP 176
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELITG 293
+ + DI++ GV+L L+ G
Sbjct: 177 EVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 95/233 (40%), Gaps = 36/233 (15%)
Query: 87 AAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQL----DHRGVQGVREFSAEVMTL 142
A + +R LGEG +G+VYK + VAIK++ + GV G EV L
Sbjct: 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA--IREVSLL 87
Query: 143 GSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAG-- 200
H N+++L + L++EY L K++ D PD M++
Sbjct: 88 KELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYM-DKNPD-------VSMRVIKSFL 138
Query: 201 --ASRGLQYLHEQLKQPVIYRDLKCSNILL-----EEGYHPKLSDFGLAKMGPSGDKTHV 253
G+ + H + ++RDLK N+LL E K+ DFGLA+ G
Sbjct: 139 YQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA--FGIPIRQ 193
Query: 254 STRVMGTYGYCAPDYAM-TGQLTFKSDIYSFGVVLLE------LITGRKAIDQ 299
T + T Y P+ + + + DI+S + E L G IDQ
Sbjct: 194 FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ 246
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 40/211 (18%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVREFSAEV-MTLGSADHPNLVKLIGY 156
+G G + V K C+ K + A+K +D + R+ + E+ + L HPN++ L
Sbjct: 30 IGVGSYS-VCKRCIHKATNMEFAVKIID----KSKRDPTEEIEILLRYGQHPNIITLKDV 84
Query: 157 CAEGDQRLLVYEYMPLGSL-DKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQP 215
+G +V E M G L DK L R + ++ ++YLH Q
Sbjct: 85 YDDGKYVYVVTELMKGGELLDKILRQKFFSEREAS-----AVLFTITKTVEYLH---AQG 136
Query: 216 VIYRDLKCSNIL-LEEGYHP---KLSDFGLAK---------MGPSGDKTHVSTRVMGTYG 262
V++RDLK SNIL ++E +P ++ DFG AK M P V+ V+ G
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQG 196
Query: 263 YCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y A DI+S GV+L ++TG
Sbjct: 197 YDA-----------ACDIWSLGVLLYTMLTG 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLV 151
LG G F V K C EK + A K + R + R + EV L HPN++
Sbjct: 19 LGSGQFA-VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L +L+ E + G L D + L + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 212 LKQPVIYRDLKCSNILLEEGYHPK----LSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+ + DLK NI+L + PK + DFGLA G++ + GT + AP+
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE 187
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 23/213 (10%)
Query: 97 CCLGEGGFGKVY--KGCLEKIEQVVAIKQLDHRGVQGVREFSA--EVMTLGSADHPNLVK 152
C +G G +G VY K K ++ A+KQ++ G+ SA E+ L HPN++
Sbjct: 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS----MSACREIALLRELKHPNVIS 82
Query: 153 LIG-YCAEGDQRL-LVYEYMP--LGSLDKHLHDLRPDTRPLDWNTRM--KIAAGASRGLQ 206
L + + D+++ L+++Y L + K + + +P+ M + G+
Sbjct: 83 LQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH 142
Query: 207 YLHEQLKQPVIYRDLKCSNILL----EEGYHPKLSDFGLAKMGPSGDKTHVST-RVMGTY 261
YLH V++RDLK +NIL+ E K++D G A++ S K V+ T+
Sbjct: 143 YLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTF 199
Query: 262 GYCAPDYAMTGQLTFKS-DIYSFGVVLLELITG 293
Y AP+ + + K+ DI++ G + EL+T
Sbjct: 200 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 97/236 (41%), Gaps = 28/236 (11%)
Query: 88 AATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFS------AEVMT 141
A +R LG+GGFG V+ G VAIK + V G S EV
Sbjct: 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVAL 87
Query: 142 L----GSADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKI 197
L HP +++L+ + + +LV E PL + D L D + PL
Sbjct: 88 LWKVGAGGGHPGVIRLLDWFETQEGFMLVLE-RPLPAQD--LFDYITEKGPLGEGPSRCF 144
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNIL--LEEGYHPKLSDFGLAKMGPSGDKTH--V 253
+Q+ H + V++RD+K NIL L G KL DFG SG H
Sbjct: 145 FGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCA-KLIDFG------SGALLHDEP 194
Query: 254 STRVMGTYGYCAPDYAMTGQL-TFKSDIYSFGVVLLELITGRKAIDQTKDRKELNL 308
T GT Y P++ Q + ++S G++L +++ G ++ ++ E L
Sbjct: 195 YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAEL 250
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLV 151
LG G F V K C EK + A K + R + R + EV L HPN++
Sbjct: 19 LGSGKFA-VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L +L+ E + G L D + L + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 212 LKQPVIYRDLKCSNILLEEGYHPK----LSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+ + DLK NI+L + PK + DFGLA G++ + GT + AP+
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPE 187
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 99 LGEGGFGKVYKGCLEKI-EQVVAIKQLDHR-GVQGVREFSAEVMTLGSADHPNLVKLIGY 156
LGEG +V + C+ I Q A+K ++ + G R F M H N+++LI +
Sbjct: 21 LGEGAHARV-QTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
E D+ LV+E M GS+ H+H R L+ + ++ A A L +LH + +
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIHKRR-HFNELEASVVVQDVASA---LDFLH---NKGI 132
Query: 217 IYRDLKCSNILLEEGYHP------KLSDFGLAK-MGPSGDKTHVSTRVM----GTYGYCA 265
+RDLK NIL E HP K+ DF L + +GD + +ST + G+ Y A
Sbjct: 133 AHRDLKPENILCE---HPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 266 PDY--AMTGQLTF---KSDIYSFGVVLLELITG 293
P+ A + + + + D++S GV+L L++G
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLV 151
LG G F V K C EK + A K + R + R + EV L HPN++
Sbjct: 19 LGSGQFA-VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L +L+ E + G L D + L + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 212 LKQPVIYRDLKCSNILLEEGYHPK----LSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+ + DLK NI+L + PK + DFGLA G++ + GT + AP+
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE 187
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 29/207 (14%)
Query: 99 LGEGGFGKVYKGC-----LEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL 153
LG+G F V + LE +++ K+L R Q + E HPN+V+L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRKLQHPNIVRL 70
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL- 212
E LV++ + G +L D ++ + A AS +Q + E +
Sbjct: 71 HDSIQEESFHYLVFDLVTGG-------ELFEDIVAREFYSE----ADASHCIQQILESIA 119
Query: 213 ---KQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
+++R+LK N+LL +G KL+DFGLA + H GT GY +P
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSP 176
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELITG 293
+ + DI++ GV+L L+ G
Sbjct: 177 EVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLV 151
LG G F V K C EK + A K + R + R + EV L HPN++
Sbjct: 19 LGSGQFA-VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L +L+ E + G L D + L + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 212 LKQPVIYRDLKCSNILLEEGYHPK----LSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+ + DLK NI+L + PK + DFGLA G++ + GT + AP+
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPE 187
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 84/191 (43%), Gaps = 33/191 (17%)
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMK------- 196
S DHPN+++ YC+E R L Y+ L + +L DL D N +++
Sbjct: 83 SDDHPNVIRY--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS 137
Query: 197 IAAGASRGLQYLHEQLKQPVIYRDLKCSNILLE-------------EGYHPKLSDFGLAK 243
+ + G+ +LH LK +I+RDLK NIL+ E +SDFGL K
Sbjct: 138 LLRQIASGVAHLH-SLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 244 MGPSGDKTHVS--TRVMGTYGYCAPDY---AMTGQLTFKSDIYSFGVVLLELITGRKAID 298
SG GT G+ AP+ + +LT DI+S G V +++ K
Sbjct: 195 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
Query: 299 QTKDRKELNLV 309
K +E N++
Sbjct: 255 GDKYSRESNII 265
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLV 151
LG G F V K C EK + A K + R + R + EV L HPN++
Sbjct: 18 LGSGQFA-VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L +L+ E + G L D + L + G+ YLH
Sbjct: 77 TLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILNGVYYLH-- 130
Query: 212 LKQPVIYRDLKCSNILLEEGYHPK----LSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+ + DLK NI+L + PK + DFGLA G++ + GT + AP+
Sbjct: 131 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPE 186
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLV 151
LG G F V K C EK + A K + R + R + EV L HPN++
Sbjct: 18 LGSGQFA-VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L +L+ E + G L D + L + G+ YLH
Sbjct: 77 TLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILNGVYYLH-- 130
Query: 212 LKQPVIYRDLKCSNILLEEGYHPK----LSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+ + DLK NI+L + PK + DFGLA G++ + GT + AP+
Sbjct: 131 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPE 186
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 96/238 (40%), Gaps = 34/238 (14%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIE-QVVAIKQLDHRGVQGVREFSAEVM------TLGS 144
N+ LG G V + C+ K + A+K +D V G FSAE + TL
Sbjct: 5 NYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIID---VTGGGSFSAEEVQELREATLKE 60
Query: 145 AD-------HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKI 197
D HPN+++L LV++ M G L D + L KI
Sbjct: 61 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLTEKVTLSEKETRKI 116
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+ LH K +++RDLK NILL++ + KL+DFG + G+K V
Sbjct: 117 MRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EV 170
Query: 258 MGTYGYCAPDYAMTGQ------LTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
GT Y AP+ + D++S GV++ L+ G K L ++
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI 228
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 84/191 (43%), Gaps = 33/191 (17%)
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMK------- 196
S DHPN+++ YC+E R L Y+ L + +L DL D N +++
Sbjct: 83 SDDHPNVIRY--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS 137
Query: 197 IAAGASRGLQYLHEQLKQPVIYRDLKCSNILLE-------------EGYHPKLSDFGLAK 243
+ + G+ +LH LK +I+RDLK NIL+ E +SDFGL K
Sbjct: 138 LLRQIASGVAHLH-SLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 244 MGPSGDKTHVS--TRVMGTYGYCAPDY---AMTGQLTFKSDIYSFGVVLLELITGRKAID 298
SG GT G+ AP+ + +LT DI+S G V +++ K
Sbjct: 195 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
Query: 299 QTKDRKELNLV 309
K +E N++
Sbjct: 255 GDKYSRESNII 265
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLV 151
LG G F V K C EK + A K + R + R + EV L HPN++
Sbjct: 19 LGSGQFA-VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L +L+ E + G L D + L + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 212 LKQPVIYRDLKCSNILLEEGYHPK----LSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+ + DLK NI+L + PK + DFGLA G++ + GT + AP+
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE 187
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLV 151
LG G F V K C EK + A K + R + R + EV L HPN++
Sbjct: 19 LGSGQFA-VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L +L+ E + G L D + L + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 212 LKQPVIYRDLKCSNILLEEGYHPK----LSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+ + DLK NI+L + PK + DFGLA G++ + GT + AP+
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE 187
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 21/219 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGV---REFSAEVMTLGSADHPNLVKLIG 155
+G G +G V ++ Q VA+K+L R Q + R E+ L H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 156 YCAEGDQRLLVYE-YMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
E Y+ + L+++ D + + + RGL+Y+H
Sbjct: 95 VFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIH---SA 150
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK SN+ + E ++ DFGLA+ +V+TR Y AP+ +
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMH 205
Query: 275 TFKS-DIYSFGVVLLELITGRKA------IDQTKDRKEL 306
++ DI+S G ++ EL+ G+ IDQ K E+
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEV 244
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLV 151
LG G F V K C EK + A K + R + R + EV L HPN++
Sbjct: 19 LGSGVFA-VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L +L+ E + G L D + L + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 212 LKQPVIYRDLKCSNILLEEGYHPK----LSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+ + DLK NI+L + PK + DFGLA G++ + GT + AP+
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPE 187
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 21/219 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGV---REFSAEVMTLGSADHPNLVKLIG 155
+G G +G V ++ Q VA+K+L R Q + R E+ L H N++ L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHLKHENVIGLLD 86
Query: 156 YCAEGDQRLLVYE-YMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
E Y+ + L+++ D + + + RGL+Y+H
Sbjct: 87 VFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIH---SA 142
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK SN+ + E ++ DFGLA+ +V+TR Y AP+ +
Sbjct: 143 GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMH 197
Query: 275 TFKS-DIYSFGVVLLELITGRKA------IDQTKDRKEL 306
++ DI+S G ++ EL+ G+ IDQ K E+
Sbjct: 198 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEV 236
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 97/238 (40%), Gaps = 34/238 (14%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIE-QVVAIKQLDHRGVQGVREFSAEVM------TLGS 144
N+ LG G V + C+ K + A+K +D V G FSAE + TL
Sbjct: 18 NYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIID---VTGGGSFSAEEVQELREATLKE 73
Query: 145 AD-------HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKI 197
D HPN+++L LV++ M G L +L + L KI
Sbjct: 74 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKI 129
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+ LH K +++RDLK NILL++ + KL+DFG + G+K V
Sbjct: 130 MRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EV 183
Query: 258 MGTYGYCAPDYAMTGQ------LTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
GT Y AP+ + D++S GV++ L+ G K L ++
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI 241
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G+G +G+V+ G E+V RE E+ H N++ I
Sbjct: 45 IGKGRYGEVWMGKWRG-EKVAVKVFFTTEEASWFRE--TEIYQTVLMRHENILGFIAADI 101
Query: 159 EGD----QRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL-- 212
+G Q L+ +Y GSL +L + LD + +K+A + GL +LH ++
Sbjct: 102 KGTGSWTQLYLITDYHENGSLYDYL-----KSTTLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 213 ---KQPVIYRDLKCSNILLEEGYHPKLSDFGLA-KMGPSGDKTHV--STRVMGTYGYCAP 266
K + +RDLK NIL+++ ++D GLA K ++ + +TRV GT Y P
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMPP 215
Query: 267 DYAMTG------QLTFKSDIYSFGVVLLEL 290
+ Q +D+YSFG++L E+
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 96/238 (40%), Gaps = 34/238 (14%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIE-QVVAIKQLDHRGVQGVREFSAEVM------TLGS 144
N+ LG G V + C+ K + A+K +D V G FSAE + TL
Sbjct: 18 NYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIID---VTGGGSFSAEEVQELREATLKE 73
Query: 145 AD-------HPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKI 197
D HPN+++L LV++ M G L D + L KI
Sbjct: 74 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLTEKVTLSEKETRKI 129
Query: 198 AAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRV 257
+ LH K +++RDLK NILL++ + KL+DFG + G+K V
Sbjct: 130 MRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SV 183
Query: 258 MGTYGYCAPDYAMTGQ------LTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
GT Y AP+ + D++S GV++ L+ G K L ++
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI 241
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 16/225 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA--EVMTLGSADHPNLVKLIGY 156
+G+G FG+V+K K Q VA+K++ + +A E+ L H N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 157 C---AEGDQRLLVYEYMPLGSLDKHLHDLRPDTR-PLDWNTRMKIAAGASRGLQYLHEQL 212
C A R Y+ + L L + + ++ GL Y+H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH--- 142
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAK---MGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ +++RD+K +N+L+ KL+DFGLA+ + + RV+ T Y P+
Sbjct: 143 RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPEL- 200
Query: 270 MTGQLTF--KSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWL 312
+ G+ + D++ G ++ E+ T + ++ +L L++ L
Sbjct: 201 LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 245
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 37/195 (18%)
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMK------- 196
S DHPN+++ YC+E R L Y+ L + +L DL D N +++
Sbjct: 65 SDDHPNVIRY--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS 119
Query: 197 IAAGASRGLQYLHEQLKQPVIYRDLKCSNILLE-------------EGYHPKLSDFGLAK 243
+ + G+ +LH LK +I+RDLK NIL+ E +SDFGL K
Sbjct: 120 LLRQIASGVAHLH-SLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 244 MGPSGDKTHVS--TRVMGTYGYCAPDYAMTG-------QLTFKSDIYSFGVVLLELITGR 294
SG + + GT G+ AP+ +LT DI+S G V +++
Sbjct: 177 KLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 295 KAIDQTKDRKELNLV 309
K K +E N++
Sbjct: 237 KHPFGDKYSRESNII 251
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 16/225 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA--EVMTLGSADHPNLVKLIGY 156
+G+G FG+V+K K Q VA+K++ + +A E+ L H N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 157 C---AEGDQRLLVYEYMPLGSLDKHLHDLRPDTR-PLDWNTRMKIAAGASRGLQYLHEQL 212
C A R Y+ + L L + + ++ GL Y+H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH--- 142
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAK---MGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ +++RD+K +N+L+ KL+DFGLA+ + + RV+ T Y P+
Sbjct: 143 RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPE-L 200
Query: 270 MTGQLTF--KSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWL 312
+ G+ + D++ G ++ E+ T + ++ +L L++ L
Sbjct: 201 LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 245
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 99 LGEGGFGKVYKGCLEKI------EQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVK 152
LG+G F V + C++K +++ K+L R Q + E A + L HPN+V+
Sbjct: 39 LGKGAFS-VVRRCVKKTPTQEYAAKIINTKKLSARDHQKL-EREARICRL--LKHPNIVR 94
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
L +E LV++ + G +L D ++ + + + L+ ++
Sbjct: 95 LHDSISEEGFHYLVFDLVTGG-------ELFEDIVAREYYSEADASHCIHQILESVNHIH 147
Query: 213 KQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ +++RDLK N+LL +G KL+DFGLA + G++ GT GY +P+
Sbjct: 148 QHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQ-QAWFGFAGTPGYLSPEVL 205
Query: 270 MTGQLTFKSDIYSFGVVLLELITG 293
DI++ GV+L L+ G
Sbjct: 206 RKDPYGKPVDIWACGVILYILLVG 229
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 16/225 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA--EVMTLGSADHPNLVKLIGY 156
+G+G FG+V+K K Q VA+K++ + +A E+ L H N+V LI
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 157 C---AEGDQRLLVYEYMPLGSLDKHLHDLRPDTR-PLDWNTRMKIAAGASRGLQYLHEQL 212
C A R Y+ + L L + + ++ GL Y+H
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH--- 141
Query: 213 KQPVIYRDLKCSNILLEEGYHPKLSDFGLAK---MGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ +++RD+K +N+L+ KL+DFGLA+ + + RV+ T Y P+
Sbjct: 142 RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPE-L 199
Query: 270 MTGQLTF--KSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWL 312
+ G+ + D++ G ++ E+ T + ++ +L L++ L
Sbjct: 200 LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 244
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 30/209 (14%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD--HRGVQGVREFSAEVMTLGSADHPNLVKLIGY 156
+G+G FG+VY G + VAI+ +D ++ F EVM H N+V +G
Sbjct: 41 IGKGRFGQVYHG---RWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGA 97
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
C ++ +L + D + LD N +IA +G+ YLH + +
Sbjct: 98 CMSPPHLAIITSLCKGRTLYSVVRDAKI---VLDVNKTRQIAQEIVKGMGYLH---AKGI 151
Query: 217 IYRDLKCSNILLEEGYHPKLSDFGLAKM------GPSGDKTHVSTRVMGTYGYCAPDYAM 270
+++DLK N+ + G ++DFGL + G DK + G + AP+
Sbjct: 152 LHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQN---GWLCHLAPEIIR 207
Query: 271 T-------GQLTFK--SDIYSFGVVLLEL 290
+L F SD+++ G + EL
Sbjct: 208 QLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLV 151
LG G F V K C EK + A K + R + R + EV L HPN++
Sbjct: 19 LGSGQFA-VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L +L+ E + G L D + L + G+ YLH
Sbjct: 78 TLHEVYENKTDVILIGELVAGGEL----FDFLAEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 212 LKQPVIYRDLKCSNILLEEGYHPK----LSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+ + DLK NI+L + PK + DFGLA G++ + GT + AP+
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPE 187
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 30/208 (14%)
Query: 99 LGEGGFGKVYKGCL------EKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVK 152
LG+G F V + C+ E +++ K+L R Q + E A + L HPN+V+
Sbjct: 12 LGKGAFS-VVRRCMKIPTGQEYAAKIINTKKLSARDHQKL-EREARICRL--LKHPNIVR 67
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
L +E LV++ + G +L D ++ + A AS +Q + E +
Sbjct: 68 LHDSISEEGFHYLVFDLVTGG-------ELFEDIVAREYYSE----ADASHCIQQILESV 116
Query: 213 KQ----PVIYRDLKCSNILL---EEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCA 265
+++RDLK N+LL +G KL+DFGLA + GD+ GT GY +
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYLS 174
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELITG 293
P+ D+++ GV+L L+ G
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 27/212 (12%)
Query: 95 SDC-CLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL 153
++C +G G FG V++ L + ++ VAIK++ +Q R + E+ + HPN+V L
Sbjct: 43 TNCKVIGNGSFGVVFQAKLVESDE-VAIKKV----LQDKRFKNRELQIMRIVKHPNVVDL 97
Query: 154 IGYC-AEGDQR-----LLVYEYMP--LGSLDKHLHDLRPDTRPLDWNTRMKI-AAGASRG 204
+ + GD++ LV EY+P + +H L+ T P+ +K+ R
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLK-QTMPM---LLIKLYMYQLLRS 153
Query: 205 LQYLHEQLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L Y+H + +RD+K N+LL+ KL DFG AK+ +G+ + + Y Y
Sbjct: 154 LAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN--VSXICSRY-Y 207
Query: 264 CAPDYAM-TGQLTFKSDIYSFGVVLLELITGR 294
AP+ T DI+S G V+ EL+ G+
Sbjct: 208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 14/209 (6%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
LG G F +V+ ++ A+K + E+ L H N+V L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
LV + + G L + + T + + I S ++YLHE +++
Sbjct: 77 STTHYYLVMQLVSGGELFDRILERGVYTEK---DASLVIQQVLS-AVKYLHEN---GIVH 129
Query: 219 RDLKCSNILL---EEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLT 275
RDLK N+L EE ++DFGL+KM +G + + GT GY AP+ +
Sbjct: 130 RDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTPGYVAPEVLAQKPYS 185
Query: 276 FKSDIYSFGVVLLELITGRKAIDQTKDRK 304
D +S GV+ L+ G + + K
Sbjct: 186 KAVDCWSIGVITYILLCGYPPFYEETESK 214
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 16/208 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G G +G+V + A K++ V+ V F E+ + S DHPN+++L
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 93
Query: 159 EGDQRLLVYEYMPLGSL-DKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVI 217
+ LV E G L ++ +H R + +I + Y H K V
Sbjct: 94 DNTDIYLVMELCTGGELFERVVHK-----RVFRESDAARIMKDVLSAVAYCH---KLNVA 145
Query: 218 YRDLKCSNILL--EEGYHP-KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+RDLK N L + P KL DFGLA G + T+V GT Y +P + G
Sbjct: 146 HRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK--MMRTKV-GTPYYVSPQ-VLEGLY 201
Query: 275 TFKSDIYSFGVVLLELITGRKAIDQTKD 302
+ D +S GV++ L+ G D
Sbjct: 202 GPECDEWSAGVMMYVLLCGYPPFSAPTD 229
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 16/208 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G G +G+V + A K++ V+ V F E+ + S DHPN+++L
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 76
Query: 159 EGDQRLLVYEYMPLGSL-DKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVI 217
+ LV E G L ++ +H R + +I + Y H K V
Sbjct: 77 DNTDIYLVMELCTGGELFERVVHK-----RVFRESDAARIMKDVLSAVAYCH---KLNVA 128
Query: 218 YRDLKCSNILL--EEGYHP-KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+RDLK N L + P KL DFGLA G + T+V GT Y +P + G
Sbjct: 129 HRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK--MMRTKV-GTPYYVSPQ-VLEGLY 184
Query: 275 TFKSDIYSFGVVLLELITGRKAIDQTKD 302
+ D +S GV++ L+ G D
Sbjct: 185 GPECDEWSAGVMMYVLLCGYPPFSAPTD 212
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHPNLVKLIG 155
+G G G V +E+ VAIK+L R Q + E++ + +H N++ L+
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN 90
Query: 156 -YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ + Y+ + +D +L + LD + G+++LH
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVI--QMELDHERMSYLLYQMLVGIKHLH---SA 145
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y AP+ +
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 275 TFKSDIYSFGVVLLELITG 293
DI+S GV++ E+I G
Sbjct: 203 KENVDIWSVGVIMGEMIKG 221
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G G FG ++ ++VA+K ++ RG + E++ S HPN+V+
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+V EY G L + + + R + R S G+ Y H V +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNA---GRFSEDEARFFFQQLIS-GVSYAH---AMQVAH 138
Query: 219 RDLKCSNILLEEGYHP--KLSDFGLAKMGPSGDKTHVSTR-VMGTYGYCAPDYAMTGQLT 275
RDLK N LL+ P K++DFG +K H + +GT Y AP+ + +
Sbjct: 139 RDLKLENTLLDGSPAPRLKIADFGYSK----ASVLHSQPKSAVGTPAYIAPEVLLKKEYD 194
Query: 276 FK-SDIYSFGVVLLELITGRKAIDQTKDRKEL 306
K +D++S GV L ++ G + ++ K
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNF 226
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 33/221 (14%)
Query: 91 GNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSA---EVMTLGSA-- 145
++R L +G F K+ EK + A+K+ + ++ R+F+ + +++ S
Sbjct: 31 NDYRIIRTLNQGKFNKII--LCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYD 88
Query: 146 DHPNLVKLIG-----YC--AEG-----DQRLLVYEYMPLGSL---DKHLHDLRPDTRPLD 190
D N +++I YC EG D+ ++YEYM S+ D++ L +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 191 WNTRMK-IAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGD 249
+K I Y+H + + + +RD+K SNIL+++ KLSDFG ++ D
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMV--D 204
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQLTF---KSDIYSFGVVL 287
K +R GTY + P++ + + ++ K DI+S G+ L
Sbjct: 205 KKIKGSR--GTYEFMPPEF-FSNESSYNGAKVDIWSLGICL 242
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAE-VMTLGSADHPNLVKLIGYC 157
LG G FG+V++ ++ A+K++ + F E ++ P +V L G
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLYGAV 133
Query: 158 AEGDQRLLVYEYMPLGSLDKHLHDL--RPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQP 215
EG + E + GSL + + + P+ R L + + A GL+YLH +
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQ------ALEGLEYLHTRR--- 184
Query: 216 VIYRDLKCSNILLE-EGYHPKLSDFGLAK-MGPSGDKTHVST--RVMGTYGYCAPDYAMT 271
+++ D+K N+LL +G L DFG A + P G + T + GT + AP+ M
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
K DI+S ++L ++ G
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 14/211 (6%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G G FG ++ ++VA+K ++ RG + E++ S HPN+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIAANVKREIINHRSLRHPNIVRFKEVIL 85
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+V EY G L + + + R + R S G+ Y H V +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNA---GRFSEDEARFFFQQLIS-GVSYCH---AMQVCH 138
Query: 219 RDLKCSNILLEEGYHPKLS--DFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTF 276
RDLK N LL+ P+L DFG +K S +GT Y AP+ + +
Sbjct: 139 RDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 195
Query: 277 K-SDIYSFGVVLLELITGRKAIDQTKDRKEL 306
K +D++S GV L ++ G + ++ K
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNF 226
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 30/208 (14%)
Query: 99 LGEGGFGKVYKGCL------EKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVK 152
LG+G F V + C+ E +++ K+L R Q + E A + L HPN+V+
Sbjct: 12 LGKGAFS-VVRRCMKIPTGQEYAAKIINTKKLSARDHQKL-EREARICRL--LKHPNIVR 67
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
L +E LV++ + G +L D ++ + A AS +Q + E +
Sbjct: 68 LHDSISEEGFHYLVFDLVTGG-------ELFEDIVAREYYSE----ADASHCIQQILESV 116
Query: 213 KQ----PVIYRDLKCSNILL---EEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCA 265
+++RDLK N+LL +G KL+DFGLA + GD+ GT GY +
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYLS 174
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELITG 293
P+ D+++ GV+L L+ G
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 37/195 (18%)
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMK------- 196
S DHPN+++ YC+E R L Y+ L + +L DL D N +++
Sbjct: 65 SDDHPNVIRY--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS 119
Query: 197 IAAGASRGLQYLHEQLKQPVIYRDLKCSNILLE-------------EGYHPKLSDFGLAK 243
+ + G+ +LH LK +I+RDLK NIL+ E +SDFGL K
Sbjct: 120 LLRQIASGVAHLH-SLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 244 MGPSGDKTHVS--TRVMGTYGYCAPDYAMTG-------QLTFKSDIYSFGVVLLELITGR 294
SG GT G+ AP+ +LT DI+S G V +++
Sbjct: 177 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 295 KAIDQTKDRKELNLV 309
K K +E N++
Sbjct: 237 KHPFGDKYSRESNII 251
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 46/214 (21%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVREFSAEV-MTLGSADHPNLVKLIGY 156
+G G + + K C+ K + A+K +D + R+ S E+ + L HPN++ L
Sbjct: 35 IGVGSYSEC-KRCVHKATNMEYAVKVID----KSKRDPSEEIEILLRYGQHPNIITLKDV 89
Query: 157 CAEGDQRLLVYEYMPLGSL-DKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQP 215
+G LV E M G L DK L R + + + ++YLH Q
Sbjct: 90 YDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLH---SQG 141
Query: 216 VIYRDLKCSNIL-LEEGYHP---KLSDFGLAK---------MGPSGDKTHVSTRVMGTYG 262
V++RDLK SNIL ++E +P ++ DFG AK M P V+ V+ G
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 263 Y---CAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y C DI+S G++L ++ G
Sbjct: 202 YDEGC--------------DIWSLGILLYTMLAG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHPNLVKLIG 155
+G G G V +E+ VAIK+L R Q + E++ + +H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN 90
Query: 156 -YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ + Y+ + +D +L + LD + G+++LH
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVI--QMELDHERMSYLLYQMLVGIKHLH---SA 145
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK SNI+++ K+ DFGLA+ +G ++ V+ Y Y AP+ +
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGY 202
Query: 275 TFKSDIYSFGVVLLELITG 293
DI+S GV++ E+I G
Sbjct: 203 KENVDIWSVGVIMGEMIKG 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 46/214 (21%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVREFSAEV-MTLGSADHPNLVKLIGY 156
+G G + + K C+ K + A+K +D + R+ S E+ + L HPN++ L
Sbjct: 35 IGVGSYSEC-KRCVHKATNMEYAVKVID----KSKRDPSEEIEILLRYGQHPNIITLKDV 89
Query: 157 CAEGDQRLLVYEYMPLGSL-DKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQP 215
+G LV E M G L DK L R + + + ++YLH Q
Sbjct: 90 YDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLHSQ---G 141
Query: 216 VIYRDLKCSNIL-LEEGYHP---KLSDFGLAK---------MGPSGDKTHVSTRVMGTYG 262
V++RDLK SNIL ++E +P ++ DFG AK M P V+ V+ G
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 263 Y---CAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y C DI+S G++L ++ G
Sbjct: 202 YDEGC--------------DIWSLGILLYTMLAG 221
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +Q R + E+ + DH N+V+L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 158 AEGDQRLLVY-----EYMPLGSLDKHLHDLRP-DTRPLDWNTRMKI-AAGASRGLQYLHE 210
+ G+++ +VY +Y+P H R T P+ + +K+ R L Y+H
Sbjct: 84 SSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 140
Query: 211 QLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ +RD+K N+LL+ KL DFG AK G+ + + + Y AP+
Sbjct: 141 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELI 194
Query: 270 M-TGQLTFKSDIYSFGVVLLELITGR 294
T D++S G VL EL+ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 98/234 (41%), Gaps = 32/234 (13%)
Query: 88 AATGNFRSDCCLGEGGFGKVY----KGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLG 143
A + F + LG G VY KG + V K +D + V+ E+ L
Sbjct: 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVR------TEIGVLL 103
Query: 144 SADHPNLVKLIGYCAEGDQRLLVYEYMPLGSL-DKHLHDLRPDTRPLDWNTRMKIAAGAS 202
HPN++KL + LV E + G L D+ + R + + A A
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVA- 162
Query: 203 RGLQYLHEQLKQPVIYRDLKCSNILLEEGYHP----KLSDFGLAKMGPSGDKTHVSTRVM 258
YLHE +++RDLK N+L P K++DFGL+K+ + + V
Sbjct: 163 ----YLHEN---GIVHRDLKPENLLYATP-APDAPLKIADFGLSKIV---EHQVLMKTVC 211
Query: 259 GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAI-----DQTKDRKELN 307
GT GYCAP+ + D++S G++ L+ G + DQ R+ LN
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILN 265
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 14/211 (6%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G G FG ++ ++VA+K ++ RG + E++ S HPN+V+
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+V EY G L + + + R + R S G+ Y H V +
Sbjct: 85 TPTHLAIVMEYASGGELFERICNA---GRFSEDEARFFFQQLIS-GVSYCH---AMQVCH 137
Query: 219 RDLKCSNILLEEGYHPKLS--DFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTF 276
RDLK N LL+ P+L DFG +K S +GT Y AP+ + +
Sbjct: 138 RDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 194
Query: 277 K-SDIYSFGVVLLELITGRKAIDQTKDRKEL 306
K +D++S GV L ++ G + ++ K
Sbjct: 195 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNF 225
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +Q R + E+ + DH N+V+L +
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 111
Query: 158 AEGDQRLLVY-----EYMPLGSLDKHLHDLRP-DTRPLDWNTRMKI-AAGASRGLQYLHE 210
+ G+++ VY +Y+P H R T P+ + +K+ R L Y+H
Sbjct: 112 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 168
Query: 211 QLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDK--THVSTRVMGTYGYCAPD 267
+ +RD+K N+LL+ KL DFG AK G+ +++ +R Y AP+
Sbjct: 169 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 220
Query: 268 YAM-TGQLTFKSDIYSFGVVLLELITGR 294
T D++S G VL EL+ G+
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 30/208 (14%)
Query: 99 LGEGGFGKVYKGCL------EKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVK 152
LG+G F V + C+ E +++ K+L R Q + E A + L HPN+V+
Sbjct: 30 LGKGAFS-VVRRCVKVLAGQEYAAKIINTKKLSARDHQKL-EREARICRL--LKHPNIVR 85
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
L +E L+++ + G +L D ++ + A AS +Q + E +
Sbjct: 86 LHDSISEEGHHYLIFDLVTGG-------ELFEDIVAREYYSE----ADASHCIQQILEAV 134
Query: 213 ----KQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCA 265
+ V++RDLK N+LL +G KL+DFGLA + G++ GT GY +
Sbjct: 135 LHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQ-QAWFGFAGTPGYLS 192
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELITG 293
P+ D+++ GV+L L+ G
Sbjct: 193 PEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAE-VMTLGSADHPNLVKLIGYC 157
+G G FG+V++ ++ A+K++ + F E ++ P +V L G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLYGAV 119
Query: 158 AEGDQRLLVYEYMPLGSLDKHLHDL--RPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQP 215
EG + E + GSL + + + P+ R L + + A GL+YLH +
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQ------ALEGLEYLHTRR--- 170
Query: 216 VIYRDLKCSNILLE-EGYHPKLSDFGLAK-MGPSGDKTHVST--RVMGTYGYCAPDYAMT 271
+++ D+K N+LL +G L DFG A + P G + T + GT + AP+ M
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
K DI+S ++L ++ G
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNG 252
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +Q R + E+ + DH N+V+L +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 158 AEGDQRLLVY-----EYMP--LGSLDKHLHDLRPDTRPLDWNTRMKI-AAGASRGLQYLH 209
+ G+++ VY +Y+P + + +H + T P+ + +K+ R L Y+H
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIY---VKLYMYQLFRSLAYIH 173
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDK--THVSTRVMGTYGYCAP 266
+ +RD+K N+LL+ KL DFG AK G+ +++ +R Y AP
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 225
Query: 267 DYAM-TGQLTFKSDIYSFGVVLLELITGR 294
+ T D++S G VL EL+ G+
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAE-VMTLGSADHPNLVKLIGYC 157
+G G FG+V++ ++ A+K++ + F E ++ P +V L G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLYGAV 135
Query: 158 AEGDQRLLVYEYMPLGSLDKHLHDL--RPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQP 215
EG + E + GSL + + + P+ R L + + A GL+YLH +
Sbjct: 136 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQ------ALEGLEYLHTRR--- 186
Query: 216 VIYRDLKCSNILLE-EGYHPKLSDFGLAK-MGPSGDKTHVST--RVMGTYGYCAPDYAMT 271
+++ D+K N+LL +G L DFG A + P G + T + GT + AP+ M
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
K DI+S ++L ++ G
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNG 268
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +Q R + E+ + DH N+V+L +
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 88
Query: 158 AEGDQRLLVY-----EYMPLGSLDKHLHDLRP-DTRPLDWNTRMKI-AAGASRGLQYLHE 210
+ G+++ VY +Y+P H R T P+ + +K+ R L Y+H
Sbjct: 89 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 145
Query: 211 QLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDK--THVSTRVMGTYGYCAPD 267
+ +RD+K N+LL+ KL DFG AK G+ +++ +R Y AP+
Sbjct: 146 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 197
Query: 268 YAM-TGQLTFKSDIYSFGVVLLELITGR 294
T D++S G VL EL+ G+
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +Q R + E+ + DH N+V+L +
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 119
Query: 158 AEGDQRLLVY-----EYMP--LGSLDKHLHDLRPDTRPLDWNTRMKI-AAGASRGLQYLH 209
+ G+++ VY +Y+P + + +H + T P+ + +K+ R L Y+H
Sbjct: 120 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIY---VKLYMYQLFRSLAYIH 175
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDK--THVSTRVMGTYGYCAP 266
+ +RD+K N+LL+ KL DFG AK G+ +++ +R Y AP
Sbjct: 176 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 227
Query: 267 DYAM-TGQLTFKSDIYSFGVVLLELITGR 294
+ T D++S G VL EL+ G+
Sbjct: 228 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +Q R + E+ + DH N+V+L +
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 96
Query: 158 AEGDQRLLVY-----EYMPLGSLDKHLHDLRP-DTRPLDWNTRMKI-AAGASRGLQYLHE 210
+ G+++ VY +Y+P H R T P+ + +K+ R L Y+H
Sbjct: 97 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 153
Query: 211 QLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDK--THVSTRVMGTYGYCAPD 267
+ +RD+K N+LL+ KL DFG AK G+ +++ +R Y AP+
Sbjct: 154 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 205
Query: 268 YAM-TGQLTFKSDIYSFGVVLLELITGR 294
T D++S G VL EL+ G+
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +Q R + E+ + DH N+V+L +
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 121
Query: 158 AEGDQRLLVY-----EYMP--LGSLDKHLHDLRPDTRPLDWNTRMKI-AAGASRGLQYLH 209
+ G+++ VY +Y+P + + +H + T P+ + +K+ R L Y+H
Sbjct: 122 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIY---VKLYMYQLFRSLAYIH 177
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDK--THVSTRVMGTYGYCAP 266
+ +RD+K N+LL+ KL DFG AK G+ +++ +R Y AP
Sbjct: 178 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 229
Query: 267 DYAM-TGQLTFKSDIYSFGVVLLELITGR 294
+ T D++S G VL EL+ G+
Sbjct: 230 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 81/206 (39%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLV 151
LG G F + K C EK + A K + R + R E EV L H N++
Sbjct: 20 LGSGQFA-IVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L +L+ E + G L D L G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLH-- 132
Query: 212 LKQPVIYRDLKCSNILLEEGY----HPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+ + + DLK NI+L + H KL DFGLA G + + GT + AP+
Sbjct: 133 -TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPE 188
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +Q R + E+ + DH N+V+L +
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 162
Query: 158 AEGDQRLLVY-----EYMPLGSLDKHLHDLRP-DTRPLDWNTRMKI-AAGASRGLQYLHE 210
+ G+++ VY +Y+P H R T P+ + +K+ R L Y+H
Sbjct: 163 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 219
Query: 211 QLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDK--THVSTRVMGTYGYCAPD 267
+ +RD+K N+LL+ KL DFG AK G+ +++ +R Y AP+
Sbjct: 220 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 271
Query: 268 YAMTGQ-LTFKSDIYSFGVVLLELITGR 294
T D++S G VL EL+ G+
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 81/206 (39%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLV 151
LG G F + K C EK + A K + R + R E EV L H N++
Sbjct: 20 LGSGQFA-IVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L +L+ E + G L D L G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLH-- 132
Query: 212 LKQPVIYRDLKCSNILLEEGY----HPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+ + + DLK NI+L + H KL DFGLA G + + GT + AP+
Sbjct: 133 -TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPE 188
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 81/206 (39%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLV 151
LG G F + K C EK + A K + R + R E EV L H N++
Sbjct: 20 LGSGQFA-IVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L +L+ E + G L D L G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLH-- 132
Query: 212 LKQPVIYRDLKCSNILLEEGY----HPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+ + + DLK NI+L + H KL DFGLA G + + GT + AP+
Sbjct: 133 -TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPE 188
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 81/206 (39%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLV 151
LG G F + K C EK + A K + R + R E EV L H N++
Sbjct: 20 LGSGQFA-IVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L +L+ E + G L D L G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLH-- 132
Query: 212 LKQPVIYRDLKCSNILLEEGY----HPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+ + + DLK NI+L + H KL DFGLA G + + GT + AP+
Sbjct: 133 -TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPE 188
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 25/207 (12%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +Q R + E+ + DH N+V+L +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 158 AEGDQRLLVY-----EYMP--LGSLDKHLHDLRPDTRPLDWNTRMKI-AAGASRGLQYLH 209
+ G+++ VY +Y+P + + +H + T P+ + +K+ R L Y+H
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIY---VKLYMYQLFRSLAYIH 173
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY 268
+ +RD+K N+LL+ KL DFG AK G+ + + + Y AP+
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPEL 227
Query: 269 AM-TGQLTFKSDIYSFGVVLLELITGR 294
T D++S G VL EL+ G+
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHPNLVKLIG 155
+G G G V +++ VAIK+L R Q + E++ + +H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXVNHKNIISLLN 90
Query: 156 -YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ + Y+ + +D +L + LD + G+++LH
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLXQVI--QMELDHERMSYLLYQMLXGIKHLHSA--- 145
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y AP+ +
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 275 TFKSDIYSFGVVLLELI------TGRKAIDQ 299
DI+S G ++ E++ GR IDQ
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +Q R + E+ + DH N+V+L +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 158 AEGDQRLLVY-----EYMPLGSLDKHLHDLRP-DTRPLDWNTRMKI-AAGASRGLQYLHE 210
+ G+++ VY +Y+P H R T P+ + +K+ R L Y+H
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 152
Query: 211 QLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ +RD+K N+LL+ KL DFG AK G+ + + + Y AP+
Sbjct: 153 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELI 206
Query: 270 M-TGQLTFKSDIYSFGVVLLELITGR 294
T D++S G VL EL+ G+
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +Q R + E+ + DH N+V+L +
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 91
Query: 158 AEGDQRLLVY-----EYMPLGSLDKHLHDLRP-DTRPLDWNTRMKI-AAGASRGLQYLHE 210
+ G+++ VY +Y+P H R T P+ + +K+ R L Y+H
Sbjct: 92 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 148
Query: 211 QLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ +RD+K N+LL+ KL DFG AK G+ + + + Y AP+
Sbjct: 149 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELI 202
Query: 270 M-TGQLTFKSDIYSFGVVLLELITGR 294
T D++S G VL EL+ G+
Sbjct: 203 FGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +Q R + E+ + DH N+V+L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 158 AEGDQRLLVY-----EYMPLGSLDKHLHDLRP-DTRPLDWNTRMKI-AAGASRGLQYLHE 210
+ G+++ VY +Y+P H R T P+ + +K+ R L Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 140
Query: 211 QLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDK--THVSTRVMGTYGYCAPD 267
+ +RD+K N+LL+ KL DFG AK G+ +++ +R Y AP+
Sbjct: 141 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 192
Query: 268 YAM-TGQLTFKSDIYSFGVVLLELITGR 294
T D++S G VL EL+ G+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +QG + E+ + DH N+V+L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 158 AEGDQRLLVY-----EYMPLGSLDKHLHDLRP-DTRPLDWNTRMKI-AAGASRGLQYLHE 210
+ G+++ VY +Y+P H R T P+ + +K+ R L Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 140
Query: 211 QLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ +RD+K N+LL+ KL DFG AK G+ + + + Y AP+
Sbjct: 141 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELI 194
Query: 270 M-TGQLTFKSDIYSFGVVLLELITGR 294
T D++S G VL EL+ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +Q R + E+ + DH N+V+L +
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 102
Query: 158 AEGDQRLLVY-----EYMPLGSLDKHLHDLRP-DTRPLDWNTRMKI-AAGASRGLQYLHE 210
+ G+++ VY +Y+P H R T P+ + +K+ R L Y+H
Sbjct: 103 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 159
Query: 211 QLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ +RD+K N+LL+ KL DFG AK G+ + + + Y AP+
Sbjct: 160 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELI 213
Query: 270 M-TGQLTFKSDIYSFGVVLLELITGR 294
T D++S G VL EL+ G+
Sbjct: 214 FGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 18/212 (8%)
Query: 99 LGEGGFG--KVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGY 156
+G G FG ++ + L K ++VA+K ++ RG E++ S HPN+V+
Sbjct: 28 IGSGNFGVARLMRDKLTK--ELVAVKYIE-RGAAIDENVQREIINHRSLRHPNIVRFKEV 84
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPV 216
++ EY G L + + + R + R S G+ Y H +
Sbjct: 85 ILTPTHLAIIMEYASGGELYERICNA---GRFSEDEARFFFQQLLS-GVSYCH---SMQI 137
Query: 217 IYRDLKCSNILLEEGYHP--KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+RDLK N LL+ P K+ DFG +K S +GT Y AP+ + +
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLRQEY 194
Query: 275 TFK-SDIYSFGVVLLELITGRKAIDQTKDRKE 305
K +D++S GV L ++ G + ++ ++
Sbjct: 195 DGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD 226
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHPNLVKLIG 155
+G G G V +++ VAIK+L R Q + E++ + +H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 90
Query: 156 -YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ + Y+ + +D +L + LD + G+++LH
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLXQVI--QMELDHERMSYLLYQMLXGIKHLHSA--- 145
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y AP+ +
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 275 TFKSDIYSFGVVLLELI------TGRKAIDQ 299
DI+S G ++ E++ GR IDQ
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +QG + E+ + DH N+V+L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 158 AEGDQRLLVY-----EYMP--LGSLDKHLHDLRPDTRPLDWNTRMKI-AAGASRGLQYLH 209
+ G+++ VY +Y+P + + +H + T P+ + +K+ R L Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIY---VKLYMYQLFRSLAYIH 139
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDK--THVSTRVMGTYGYCAP 266
+ +RD+K N+LL+ KL DFG AK G+ +++ +R Y AP
Sbjct: 140 S---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 191
Query: 267 DYAM-TGQLTFKSDIYSFGVVLLELITGR 294
+ T D++S G VL EL+ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +Q R + E+ + DH N+V+L +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 158 AEGDQRLLVY-----EYMPLGSLDKHLHDLRP-DTRPLDWNTRMKI-AAGASRGLQYLHE 210
+ G+++ VY +Y+P H R T P+ + +K+ R L Y+H
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 152
Query: 211 QLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ +RD+K N+LL+ KL DFG AK G+ + + + Y AP+
Sbjct: 153 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELI 206
Query: 270 M-TGQLTFKSDIYSFGVVLLELITGR 294
T D++S G VL EL+ G+
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +QG + E+ + DH N+V+L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 158 AEGDQRLLVY-----EYMP--LGSLDKHLHDLRPDTRPLDWNTRMKI-AAGASRGLQYLH 209
+ G+++ VY +Y+P + + +H + T P+ + +K+ R L Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIY---VKLYMYQLFRSLAYIH 139
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDK--THVSTRVMGTYGYCAP 266
+ +RD+K N+LL+ KL DFG AK G+ +++ +R Y AP
Sbjct: 140 S---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 191
Query: 267 DYAM-TGQLTFKSDIYSFGVVLLELITGR 294
+ T D++S G VL EL+ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHPNLVKLIG 155
+G G G V +++ VAIK+L R Q + E++ + +H N++ L+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 83
Query: 156 -YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ + Y+ + +D +L + LD + G+++LH
Sbjct: 84 VFTPQKTLEEFQDVYLVMELMDANLXQVI--QMELDHERMSYLLYQMLXGIKHLHSA--- 138
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y AP+ +
Sbjct: 139 GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 275 TFKSDIYSFGVVLLELI------TGRKAIDQ 299
DI+S G ++ E++ GR IDQ
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 226
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 81/206 (39%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVR------EFSAEVMTLGSADHPNLV 151
LG G F + K C EK + A K + R + R E EV L H N++
Sbjct: 20 LGSGQFA-IVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 152 KLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQ 211
L +L+ E + G L D L G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLH-- 132
Query: 212 LKQPVIYRDLKCSNILLEEGY----HPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPD 267
+ + + DLK NI+L + H KL DFGLA G + + GT + AP+
Sbjct: 133 -TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPE 188
Query: 268 YAMTGQLTFKSDIYSFGVVLLELITG 293
L ++D++S GV+ L++G
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +Q R + E+ + DH N+V+L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 158 AEGDQRLLVY-----EYMPLGSLDKHLHDLRP-DTRPLDWNTRMKI-AAGASRGLQYLHE 210
+ G+++ VY +Y+P H R T P+ + +K+ R L Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 140
Query: 211 QLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ +RD+K N+LL+ KL DFG AK G+ + + + Y AP+
Sbjct: 141 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELI 194
Query: 270 M-TGQLTFKSDIYSFGVVLLELITGR 294
T D++S G VL EL+ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 34/225 (15%)
Query: 87 AAATGNFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV------------QGVRE 134
A G + LGEG +GKV ++V+ + L R V G
Sbjct: 1 AKLIGKYLMGDLLGEGSYGKV--------KEVLDSETLCRRAVKILKKKKLRRIPNGEAN 52
Query: 135 FSAEVMTLGSADHPNLVKLIG--YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWN 192
E+ L H N+++L+ Y E + +V EY G + + D P+ R
Sbjct: 53 VKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGM--QEMLDSVPEKR-FPVC 109
Query: 193 TRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK-MGP-SGDK 250
GL+YLH Q ++++D+K N+LL G K+S G+A+ + P + D
Sbjct: 110 QAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADD 166
Query: 251 THVSTRVMGTYGYCAPDYA--MTGQLTFKSDIYSFGVVLLELITG 293
T +++ G+ + P+ A + FK DI+S GV L + TG
Sbjct: 167 TCRTSQ--GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +Q R + E+ + DH N+V+L +
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 84
Query: 158 AEGDQRLLVY-----EYMPLGSLDKHLHDLRP-DTRPLDWNTRMKI-AAGASRGLQYLHE 210
+ G+++ VY +Y+P H R T P+ + +K+ R L Y+H
Sbjct: 85 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 141
Query: 211 QLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ +RD+K N+LL+ KL DFG AK G+ + + + Y AP+
Sbjct: 142 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELI 195
Query: 270 M-TGQLTFKSDIYSFGVVLLELITGR 294
T D++S G VL EL+ G+
Sbjct: 196 FGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +Q R + E+ + DH N+V+L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 158 AEGDQRLLVY-----EYMPLGSLDKHLHDLRP-DTRPLDWNTRMKI-AAGASRGLQYLHE 210
+ G+++ VY +Y+P H R T P+ + +K+ R L Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 140
Query: 211 QLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ +RD+K N+LL+ KL DFG AK G+ + + + Y AP+
Sbjct: 141 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELI 194
Query: 270 M-TGQLTFKSDIYSFGVVLLELITGR 294
T D++S G VL EL+ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHPNLVKLIG 155
+G G G V +E+ VAIK+L R Q + E++ + +H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN 90
Query: 156 -YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ + Y+ + +D +L + LD + G+++LH
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVI--QMELDHERMSYLLYQMLVGIKHLH---SA 145
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y AP+ +
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 275 TFKSDIYSFGVVLLELITG 293
DI+S G ++ E+I G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKL-IGYC 157
+G G FG VY+ L ++VAIK++ +Q R + E+ + DH N+V+L +
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 87
Query: 158 AEGDQRLLVY-----EYMPLGSLDKHLHDLRP-DTRPLDWNTRMKI-AAGASRGLQYLHE 210
+ G+++ VY +Y+P H R T P+ + +K+ R L Y+H
Sbjct: 88 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 144
Query: 211 QLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
+ +RD+K N+LL+ KL DFG AK G+ + + + Y AP+
Sbjct: 145 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELI 198
Query: 270 M-TGQLTFKSDIYSFGVVLLELITGR 294
T D++S G VL EL+ G+
Sbjct: 199 FGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 188 PLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAK-MGP 246
P+ + + +RG+++L + I+RDL NILL E K+ DFGLA+ +
Sbjct: 195 PITMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 247 SGDKTHVS-TRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ D TR+ + AP+ + KSD++S+GV+L E+ +
Sbjct: 252 NPDYVRKGDTRL--PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 20/210 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLG----SADHPNLVKLI 154
LG G +G V K Q+ A+K++ R +E + L + D P V
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRI--RATVNSQEQKRLLXDLDISXRTVDCPFTVTFY 99
Query: 155 G-YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLK 213
G EGD + + + SLDK + + + + KIA + L++LH +L
Sbjct: 100 GALFREGD--VWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 157
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 273
VI+RD+K SN+L+ K DFG++ + G Y AP+ + +
Sbjct: 158 --VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA---GCKPYXAPE-RINPE 211
Query: 274 L-----TFKSDIYSFGVVLLELITGRKAID 298
L + KSDI+S G+ +EL R D
Sbjct: 212 LNQKGYSVKSDIWSLGITXIELAILRFPYD 241
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 218 YRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFK 277
+RD+K NIL+ L DFG+A T + V GT Y AP+ T++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 278 SDIYSFGVVLLELITG 293
+DIY+ VL E +TG
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHPNLVKLIG 155
+G G G V +++ VAIK+L R Q + E++ + +H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXVNHKNIISLLN 90
Query: 156 -YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ + Y+ + +D +L + LD + G+++LH
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLXQVI--QMELDHERMSYLLYQMLCGIKHLHSA--- 145
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y AP+ +
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 275 TFKSDIYSFGVVLLELI------TGRKAIDQ 299
DI+S G ++ E++ GR IDQ
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 16/201 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLD--HRGVQGVREFSAEVMTLGSADH-PNLVKLIG 155
LG G F V + + Q A K L RG E E+ L A P ++ L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQP 215
+ +L+ EY G + L + N +++ G+ YLH+
Sbjct: 97 VYENTSEIILILEYAAGGEIFSLC--LPELAEMVSENDVIRLIKQILEGVYYLHQN---N 151
Query: 216 VIYRDLKCSNILLEEGY---HPKLSDFGLA-KMGPSGDKTHVSTRVMGTYGYCAPDYAMT 271
+++ DLK NILL Y K+ DFG++ K+G + + +MGT Y AP+
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR----EIMGTPEYLAPEILNY 207
Query: 272 GQLTFKSDIYSFGVVLLELIT 292
+T +D+++ G++ L+T
Sbjct: 208 DPITTATDMWNIGIIAYMLLT 228
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHPNLVKLIG 155
+G G G V +E+ VAIK+L R Q + E++ + +H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 156 -YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ + Y+ + +D +L + LD + G+++LH
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVI--QMELDHERMSYLLYQMLCGIKHLH---SA 145
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK SNI+++ K+ DFGLA+ +G ++ V+ Y Y AP+ +
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGY 202
Query: 275 TFKSDIYSFGVVLLELITG 293
DI+S G ++ E+I G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+++LH +I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELI------TGRKAIDQ 299
AP+ + DI+S G ++ E++ GR IDQ
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 30/208 (14%)
Query: 99 LGEGGFGKVYKGCL------EKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVK 152
+G+G F V + C+ E +++ K+L R Q + E A + L H N+V+
Sbjct: 12 IGKGAFS-VVRRCVKLCTGHEYAAKIINTKKLSARDHQKL-EREARICRL--LKHSNIVR 67
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
L +E LV++ + G +L D ++ + A AS +Q + E +
Sbjct: 68 LHDSISEEGFHYLVFDLVTGG-------ELFEDIVAREYYSE----ADASHCIQQILEAV 116
Query: 213 ----KQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCA 265
+ V++RDLK N+LL +G KL+DFGLA + GD+ GT GY +
Sbjct: 117 LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYLS 174
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELITG 293
P+ DI++ GV+L L+ G
Sbjct: 175 PEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHPNLVKLIG 155
+G G G V +E+ VAIK+L R Q + E++ + +H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN 90
Query: 156 -YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ + Y+ + +D +L + LD + G+++LH
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVI--QMELDHERMSYLLYQMLCGIKHLH---SA 145
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y AP+ +
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 275 TFKSDIYSFGVVLLELITG 293
DI+S G ++ E+I G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHPNLVKLIG 155
+G G G V +E+ VAIK+L R Q + E++ + +H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 156 -YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ + Y+ + +D +L + LD + G+++LH
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVI--QMELDHERMSYLLYQMLCGIKHLH---SA 145
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y AP+ +
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 275 TFKSDIYSFGVVLLELITG 293
DI+S G ++ E+I G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 30/208 (14%)
Query: 99 LGEGGFGKVYKGCL------EKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVK 152
LG+G F V + C+ E ++ K+L R Q + E A + L HPN+V+
Sbjct: 19 LGKGAFS-VVRRCVKVLAGQEYAAMIINTKKLSARDHQKL-EREARICRL--LKHPNIVR 74
Query: 153 LIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQL 212
L +E L+++ + G L + D ++ + A AS +Q + E +
Sbjct: 75 LHDSISEEGHHYLIFDLVTGGELFE-------DIVAREYYSE----ADASHCIQQILEAV 123
Query: 213 ----KQPVIYRDLKCSNILLE---EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCA 265
+ V++R+LK N+LL +G KL+DFGLA + G++ GT GY +
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQ-QAWFGFAGTPGYLS 181
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELITG 293
P+ D+++ GV+L L+ G
Sbjct: 182 PEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 23/218 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSA-----DHPNLVKL 153
+G+G F V + + Q A+K +D S E + ++ HP++V+L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 154 IGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASR----GLQYLH 209
+ + +V+E+M L + R D + +A+ R L+Y H
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVK-RADA---GFVYSEAVASHYMRQILEALRYCH 147
Query: 210 EQLKQPVIYRDLKCSNILL---EEGYHPKLSDFGLA-KMGPSGDKTHVSTRVMGTYGYCA 265
+ +I+RD+K N+LL E KL DFG+A ++G SG V+ +GT + A
Sbjct: 148 D---NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG---LVAGGRVGTPHFMA 201
Query: 266 PDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDR 303
P+ D++ GV+L L++G TK+R
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER 239
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHPNLVKLIG 155
+G G G V +E+ VAIK+L R Q + E++ + +H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 156 -YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ + Y+ + +D +L + LD + G+++LH
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SA 145
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK SNI+++ K+ DFGLA+ +G ++ V+ Y Y AP+ +
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPEVVTRY-YRAPEVILGMGY 202
Query: 275 TFKSDIYSFGVVLLELITG 293
DI+S G ++ E+I G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHPNLVKLIG 155
+G G G V +E+ VAIK+L R Q + E++ + +H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 156 -YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ + Y+ + +D +L + LD + G+++LH
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SA 145
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK SNI+++ K+ DFGLA+ +G + V+ Y Y AP+ +
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRY-YRAPEVILGMGY 202
Query: 275 TFKSDIYSFGVVLLELI------TGRKAIDQ 299
DI+S G ++ E++ GR IDQ
Sbjct: 203 KENVDIWSVGCIMGEMVCHKILFPGRDYIDQ 233
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 97/236 (41%), Gaps = 45/236 (19%)
Query: 99 LGEGGFGKVYKGCLE-----KIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPN---- 149
LGEG FGKV + C++ + V +K +D R + R + L + D PN
Sbjct: 22 LGEGAFGKVVE-CIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTD-PNSTFR 78
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPD-TRPLDWNTRMKIAAGASRGLQYL 208
V+++ + +V+E + L + D ++ + P + K+A + + +L
Sbjct: 79 CVQMLEWFEHHGHICIVFELLGLSTYDF----IKENGFLPFRLDHIRKMAYQICKSVNFL 134
Query: 209 HEQLKQPVIYRDLKCSNILL-----EEGYHPKLS--------------DFGLAKMGPSGD 249
H + + DLK NIL E Y+PK+ DFG A
Sbjct: 135 H---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH 191
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKE 305
T VSTR Y AP+ + + D++S G +L+E G + T D KE
Sbjct: 192 STLVSTR-----HYRAPEVILALGWSQPCDVWSIGCILIEYYLGF-TVFPTHDSKE 241
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHPNLVKLIG 155
+G G G V +++ VAIK+L R Q + E++ + +H N++ L+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 128
Query: 156 -YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ + Y+ + +D +L + LD + G+++LH
Sbjct: 129 VFTPQKTLEEFQDVYLVMELMDANLCQVI--QMELDHERMSYLLYQMLCGIKHLHSA--- 183
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y AP+ +
Sbjct: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 240
Query: 275 TFKSDIYSFGVVLLELI------TGRKAIDQ 299
DI+S G ++ E++ GR IDQ
Sbjct: 241 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 201 ASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV---STRV 257
++G+++L + I+RDL NILL E K+ DFGLA+ D +V R+
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 262
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV+L E+ +
Sbjct: 263 --PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHPNLVKLIG 155
+G G G V +E+ VAIK+L R Q + E++ + +H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 156 -YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ + Y+ + +D +L + LD + G+++LH
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVI--QMELDHERMSYLLYQMLCGIKHLHSA--- 145
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y AP+ +
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 275 TFKSDIYSFGVVLLELITG 293
DI+S G ++ E+I G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 22/212 (10%)
Query: 93 FRSDCCLGEGGFGKVYKGCLEKIEQVVAIK--QLDHRGVQGVREFSAEVMTLGSADHPNL 150
FR +G G FG++Y G + + VAIK + + Q + E + G PN
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPN- 67
Query: 151 VKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPD-TRPLDWNTRMKIAAGASRGLQYLH 209
V+ G EGD +LV + L L DL +R L T + +A ++++H
Sbjct: 68 VRWFG--VEGDYNVLVMDL-----LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 120
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHPK---LSDFGLA-KMGPSGDKTHVSTR----VMGTY 261
+ ++RD+K N L+ G + DFGLA K + H+ R + GT
Sbjct: 121 S---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTA 177
Query: 262 GYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y + + + + + + D+ S G VL+ + G
Sbjct: 178 RYASVNTHLGIEQSRRDDLESLGYVLMYFLRG 209
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+++LH +I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y
Sbjct: 139 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 192
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELI------TGRKAIDQ 299
AP+ + DI+S G ++ E++ GR IDQ
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+++LH +I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELI------TGRKAIDQ 299
AP+ + DI+S G ++ E++ GR IDQ
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+++LH +I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y
Sbjct: 139 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 192
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELI------TGRKAIDQ 299
AP+ + DI+S G ++ E++ GR IDQ
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 201 ASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV---STRV 257
++G+++L + I+RDL NILL E K+ DFGLA+ D +V R+
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 264
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV+L E+ +
Sbjct: 265 --PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+++LH +I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 192
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
AP+ + DI+S G ++ E+I G
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+++LH +I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y
Sbjct: 137 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 190
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELI------TGRKAIDQ 299
AP+ + DI+S G ++ E++ GR IDQ
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 232
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+++LH +I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELI------TGRKAIDQ 299
AP+ + DI+S G ++ E++ GR IDQ
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 201 ASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV---STRV 257
++G+++L + I+RDL NILL E K+ DFGLA+ D +V R+
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 255
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV+L E+ +
Sbjct: 256 --PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 14/211 (6%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G G FG ++ ++VA+K ++ RG + E++ S HPN+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+V EY G L + + + R + R S G+ Y H V +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNA---GRFSEDEARFFFQQLIS-GVSYCH---AMQVCH 138
Query: 219 RDLKCSNILLEEGYHPKLS--DFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTF 276
RDLK N LL+ P+L FG +K S +GT Y AP+ + +
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 195
Query: 277 K-SDIYSFGVVLLELITGRKAIDQTKDRKEL 306
K +D++S GV L ++ G + ++ K
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNF 226
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+++LH +I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
AP+ + DI+S G ++ E+I G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+++LH +I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y
Sbjct: 132 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 185
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELI------TGRKAIDQ 299
AP+ + DI+S G ++ E++ GR IDQ
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 227
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+++LH +I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y
Sbjct: 176 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 229
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELI------TGRKAIDQ 299
AP+ + DI+S G ++ E++ GR IDQ
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+++LH +I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y
Sbjct: 132 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 185
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELI------TGRKAIDQ 299
AP+ + DI+S G ++ E++ GR IDQ
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 227
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+++LH +I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y
Sbjct: 131 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 184
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELI------TGRKAIDQ 299
AP+ + DI+S G ++ E++ GR IDQ
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 226
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 16/212 (7%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPNLVKLIGYCA 158
+G G FG ++ ++VA+K ++ RG + E++ S HPN+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 159 EGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIY 218
+V EY G L + + + R + R S G+ Y H V +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNA---GRFSEDEARFFFQQLIS-GVSYCH---AMQVCH 138
Query: 219 RDLKCSNILLEEGYHPKLS--DFGLAKMGPSGDKTHVSTR-VMGTYGYCAPDYAMTGQLT 275
RDLK N LL+ P+L FG +K H + +GT Y AP+ + +
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSK----SSVLHSQPKDTVGTPAYIAPEVLLKKEYD 194
Query: 276 FK-SDIYSFGVVLLELITGRKAIDQTKDRKEL 306
K +D++S GV L ++ G + ++ K
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNF 226
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 201 ASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHV---STRV 257
++G+++L + I+RDL NILL E K+ DFGLA+ D +V R+
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 257
Query: 258 MGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 292
+ AP+ T +SD++SFGV+L E+ +
Sbjct: 258 --PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+++LH +I+RDLK SNI+++ K+ DFGLA+ + + T + T Y
Sbjct: 136 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYY 189
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLV 309
AP+ + DI+S G ++ EL+ G T + N V
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKV 235
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+++LH +I+RDLK SNI+++ K+ DFGLA+ + + T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN---FMMTPYVVTRYY 191
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
AP+ + DI+S G ++ EL+ G
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 40/211 (18%)
Query: 99 LGEGGFGKVYKGCLEKIEQV-VAIKQLDHRGVQGVREFSAEV-MTLGSADHPNLVKLIGY 156
+G G + V K C+ K A+K +D + R+ + E+ + L HPN++ L
Sbjct: 30 IGVGSYS-VCKRCIHKATNXEFAVKIID----KSKRDPTEEIEILLRYGQHPNIITLKDV 84
Query: 157 CAEGDQRLLVYEYMPLGSL-DKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQP 215
+G +V E G L DK L R + ++ ++YLH Q
Sbjct: 85 YDDGKYVYVVTELXKGGELLDKILRQKFFSEREAS-----AVLFTITKTVEYLH---AQG 136
Query: 216 VIYRDLKCSNIL-LEEGYHP---KLSDFGLAKM---------GPSGDKTHVSTRVMGTYG 262
V++RDLK SNIL ++E +P ++ DFG AK P V+ V+ G
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQG 196
Query: 263 YCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y A DI+S GV+L +TG
Sbjct: 197 YDA-----------ACDIWSLGVLLYTXLTG 216
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDH----RGVQ-GVREFSAEVMTLGSADHPNLVK 152
LG+G V++G +K + AIK ++ R V +REF L +H N+VK
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEV----LKKLNHKNIVK 71
Query: 153 LIGYCAEGDQR--LLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
L E R +L+ E+ P GSL L + + L + + + G+ +L E
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEE-PSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 211 QLKQPVIYRDLKCSNILL---EEGYHP-KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
+++R++K NI+ E+G KL+DFG A+ D+ VS + GT Y P
Sbjct: 131 ---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR-ELEDDEQFVS--LYGTEEYLHP 184
Query: 267 DYAMTGQLT--------FKSDIYSFGVVLLELITG 293
D L D++S GV TG
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 86/223 (38%), Gaps = 26/223 (11%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDH--RGVQGVREFSAEVMTLGSADHPN 149
N+ +G G +G VY + E+ VAIK+++ + + E+ L
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLH 209
+++L D Y+ L D L L L I G ++H
Sbjct: 87 IIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH 146
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVS--------------- 254
E +I+RDLK +N LL + K+ DFGLA+ S T++
Sbjct: 147 ES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKN 203
Query: 255 -----TRVMGTYGYCAPDYAMTGQLTFKS-DIYSFGVVLLELI 291
T + T Y AP+ + + KS DI+S G + EL+
Sbjct: 204 LKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 32/234 (13%)
Query: 76 KSAKPFTFDELAAATGNFRSDCC----LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGV-- 129
+ K + LAA G + LG G FG V+ ++ + V +K + V
Sbjct: 5 EPPKAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLE 64
Query: 130 ------QGVREFSAEVMTLGSADHPNLVKLIGYCAEGDQRLLVYEYMPLG-----SLDKH 178
+ + + E+ L +H N++K++ LV E G +D+H
Sbjct: 65 DCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRH 124
Query: 179 LHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSD 238
R D + R ++A + YL +LK +I+RD+K NI++ E + KL D
Sbjct: 125 P---RLDEPLASYIFRQLVSA-----VGYL--RLKD-IIHRDIKDENIVIAEDFTIKLID 173
Query: 239 FGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKS-DIYSFGVVLLELI 291
FG A G + GT YCAP+ M +++S GV L L+
Sbjct: 174 FGSAAYLERGKLFYT---FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHPNLVKLIG 155
+G G G V +E+ VAIK+L R Q + E++ + +H N++ L+
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN 84
Query: 156 -YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ + Y+ + +D +L + LD + G+++LH
Sbjct: 85 VFTPQKSLEEFQDVYIVMELMDANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SA 139
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y AP+ +
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 275 TFKSDIYSFGVVLLELI------TGRKAIDQ 299
D++S G ++ E++ GR IDQ
Sbjct: 197 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 227
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHPNLVKLIG 155
+G G G V +E+ VAIK+L R Q + E++ + +H N++ L+
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN 95
Query: 156 -YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ + Y+ + +D +L + LD + G+++LH
Sbjct: 96 VFTPQKSLEEFQDVYIVMELMDANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SA 150
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK SNI+++ K+ DFGLA+ + + + T + T Y AP+ +
Sbjct: 151 GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 207
Query: 275 TFKSDIYSFGVVLLELI------TGRKAIDQ 299
D++S G ++ E++ GR IDQ
Sbjct: 208 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 238
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQG---VREFSAEVMTLGSADHPNLVKLIG 155
+G G G V +E+ VAIK+L R Q + E++ + +H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 156 -YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
+ + Y+ + +D +L + LD + G+++LH
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SA 145
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMTGQL 274
+I+RDLK SNI+++ K+ DFGLA+ +G + V+ Y Y AP+ +
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRY-YRAPEVILGMGY 202
Query: 275 TFKSDIYSFGVVLLELI------TGRKAIDQ 299
D++S G ++ E++ GR IDQ
Sbjct: 203 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 233
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
G+++LH +I+RDLK SNI+++ K+ DFGLA+ +G + V+ Y Y
Sbjct: 140 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMVPFVVTRY-Y 193
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
AP+ + DI+S G ++ E+I G
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 98/241 (40%), Gaps = 31/241 (12%)
Query: 75 GKSAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGC-LEKIEQVVAIKQL-----DHRG 128
G++A EL A + + G +G V G E I VAIK++ D R
Sbjct: 6 GEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIP--VAIKRVFNTVSDGRT 63
Query: 129 VQGV------REFSAEVMTLGSADHPNLVKL----IGYCAEGDQRLLVYEYMPLGSLDKH 178
V + + E+ L HPN++ L + + +L + + L +
Sbjct: 64 VNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQV 123
Query: 179 LHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSD 238
+HD R P M GL LHE V++RDL NILL + + D
Sbjct: 124 IHDQRIVISPQHIQYFMY---HILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICD 177
Query: 239 FGLAKMGPS-GDKTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGRKA 296
F LA+ + +KTH T Y AP+ M + T D++S G V+ E+ RKA
Sbjct: 178 FNLAREDTADANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKA 232
Query: 297 I 297
+
Sbjct: 233 L 233
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 98/241 (40%), Gaps = 31/241 (12%)
Query: 75 GKSAKPFTFDELAAATGNFRSDCCLGEGGFGKVYKGC-LEKIEQVVAIKQL-----DHRG 128
G++A EL A + + G +G V G E I VAIK++ D R
Sbjct: 6 GEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIP--VAIKRVFNTVSDGRT 63
Query: 129 VQGV------REFSAEVMTLGSADHPNLVKL----IGYCAEGDQRLLVYEYMPLGSLDKH 178
V + + E+ L HPN++ L + + +L + + L +
Sbjct: 64 VNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQV 123
Query: 179 LHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSD 238
+HD R P M GL LHE V++RDL NILL + + D
Sbjct: 124 IHDQRIVISPQHIQYFMY---HILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICD 177
Query: 239 FGLAKMGPS-GDKTHVSTRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGRKA 296
F LA+ + +KTH T Y AP+ M + T D++S G V+ E+ RKA
Sbjct: 178 FNLAREDTADANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKA 232
Query: 297 I 297
+
Sbjct: 233 L 233
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 20/230 (8%)
Query: 93 FRSDCCLGEGGFGKVYKGCLEKIEQ-VVAIKQLDHRGVQGVREFSAEVMTLGSADHPN-- 149
+ D +G+G FG+V K +++EQ VAIK + ++ + + EV L + +
Sbjct: 56 YEIDSLIGKGSFGQVVKA-YDRVEQEWVAIKIIKNKKA-FLNQAQIEVRLLELMNKHDTE 113
Query: 150 ----LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT--RPLDWNTRMKIAAGASR 203
+V L + + LV+E L +L+DL +T R + N K A
Sbjct: 114 MKYYIVHLKRHFMFRNHLCLVFE-----MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L +L + +I+ DLK NILL +PK S + G S + + + Y
Sbjct: 169 ALLFLATP-ELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFY 224
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
+P+ + D++S G +L+E+ TG + ++N + +L
Sbjct: 225 RSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVL 274
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 86/231 (37%), Gaps = 29/231 (12%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDH--RGVQGVREFSAEVMTLGSADHPN 149
N+ +G G +G VY + + VAIK+++ + + E+ L
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLH 209
+++L D Y+ L D L L L I G +++H
Sbjct: 89 IIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIH 148
Query: 210 EQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVS--------------- 254
E +I+RDLK +N LL + K+ DFGLA+ S H+
Sbjct: 149 ES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPH 205
Query: 255 --------TRVMGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITGRKA 296
T + T Y AP+ + + T DI+S G + EL+ K+
Sbjct: 206 NKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 20/230 (8%)
Query: 93 FRSDCCLGEGGFGKVYKGCLEKIEQ-VVAIKQLDHRGVQGVREFSAEVMTLGSADHPN-- 149
+ D +G+G FG+V K +++EQ VAIK + ++ + + EV L + +
Sbjct: 37 YEIDSLIGKGSFGQVVKA-YDRVEQEWVAIKIIKNKKA-FLNQAQIEVRLLELMNKHDTE 94
Query: 150 ----LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT--RPLDWNTRMKIAAGASR 203
+V L + + LV+E L +L+DL +T R + N K A
Sbjct: 95 MKYYIVHLKRHFMFRNHLCLVFE-----MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 149
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L +L + +I+ DLK NILL +PK S + G S + + + Y
Sbjct: 150 ALLFLATP-ELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFY 205
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
+P+ + D++S G +L+E+ TG + ++N + +L
Sbjct: 206 RSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVL 255
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 30/215 (13%)
Query: 98 CLGEGGFGKVYKGCLEKIEQVVAIKQLDH----RGVQ-GVREFSAEVMTLGSADHPNLVK 152
LG+G V++G +K + AIK ++ R V +REF L +H N+VK
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE----VLKKLNHKNIVK 71
Query: 153 LIGYCAEGDQR--LLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
L E R +L+ E+ P GSL L + + L + + + G+ +L E
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEE-PSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 211 QLKQPVIYRDLKCSNILL---EEGYHP-KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAP 266
+++R++K NI+ E+G KL+DFG A+ ++ + GT Y P
Sbjct: 131 ---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF---VXLYGTEEYLHP 184
Query: 267 DYAMTGQLT--------FKSDIYSFGVVLLELITG 293
D L D++S GV TG
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 45/236 (19%)
Query: 99 LGEGGFGKVYKGCLE-----KIEQVVAIKQLDHRGVQGVREFSAEVMTLGSADHPN---- 149
LGEG FGKV + C++ + V +K +D R + R + L + D PN
Sbjct: 22 LGEGAFGKVVE-CIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTD-PNSTFR 78
Query: 150 LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPD-TRPLDWNTRMKIAAGASRGLQYL 208
V+++ + +V+E + L + D ++ + P + K+A + + +L
Sbjct: 79 CVQMLEWFEHHGHICIVFELLGLSTYDF----IKENGFLPFRLDHIRKMAYQICKSVNFL 134
Query: 209 HEQLKQPVIYRDLKCSNILL-----EEGYHPKLS--------------DFGLAKMGPSGD 249
H + + DLK NIL E Y+PK+ DFG A + D
Sbjct: 135 H---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA----TYD 187
Query: 250 KTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKE 305
H ST V + Y AP+ + + D++S G +L+E G + T D KE
Sbjct: 188 DEHHSTLVXXRH-YRAPEVILALGWSQPCDVWSIGCILIEYYLGF-TVFPTHDSKE 241
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 105/261 (40%), Gaps = 42/261 (16%)
Query: 60 MDVKNLNLKDDSNNSGKSAKPFTFDELAAATGNFRSDC-CLGEGGFGKVYKGCLEKIEQV 118
MD +L DD S + +E + G S +G GG KV++ EK +Q+
Sbjct: 30 MDSPDLGTDDDDKASSSA------NECISVKGRIYSILKQIGSGGSSKVFQVLNEK-KQI 82
Query: 119 VAIK--QLDHRGVQGVREFSAEVMTLGSADHPN--LVKLIGYCAEGDQRLLVYEYMPLGS 174
AIK L+ Q + + E+ L + +++L Y DQ +Y M G+
Sbjct: 83 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-TDQ--YIYMVMECGN 139
Query: 175 LD-----KHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLE 229
+D K + P R W L+ +H + +++ DLK +N L+
Sbjct: 140 IDLNSWLKKKKSIDPWERKSYWKNM----------LEAVHTIHQHGIVHSDLKPANFLIV 189
Query: 230 EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY-----------AMTGQLTFKS 278
+G KL DFG+A + V +GT Y P+ +++ KS
Sbjct: 190 DGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 248
Query: 279 DIYSFGVVLLELITGRKAIDQ 299
D++S G +L + G+ Q
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQ 269
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 93 FRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMT---LGSADHPN 149
F+ + G+G FG V G + VAIK++ +Q R + E+ L HPN
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV----IQDPRFRNRELQIMQDLAVLHHPN 80
Query: 150 LVKLIGY---CAEGDQRLL----VYEYMP--LGSLDKHLHDLRPDTRPLDWNTRMKIAAG 200
+V+L Y E D+R + V EY+P L ++ + + P+ +
Sbjct: 81 IVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFL---FQ 137
Query: 201 ASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHP-KLSDFGLA-KMGPS-GDKTHVSTRV 257
R + LH V +RD+K N+L+ E KL DFG A K+ PS + ++ +R
Sbjct: 138 LIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY 196
Query: 258 MGTYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELITG 293
Y AP+ Q T DI+S G + E++ G
Sbjct: 197 -----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 105/261 (40%), Gaps = 42/261 (16%)
Query: 60 MDVKNLNLKDDSNNSGKSAKPFTFDELAAATGNFRSDC-CLGEGGFGKVYKGCLEKIEQV 118
MD +L DD S + +E + G S +G GG KV++ EK +Q+
Sbjct: 30 MDSPDLGTDDDDKASSSA------NECISVKGRIYSILKQIGSGGSSKVFQVLNEK-KQI 82
Query: 119 VAIK--QLDHRGVQGVREFSAEVMTLGSADHPN--LVKLIGYCAEGDQRLLVYEYMPLGS 174
AIK L+ Q + + E+ L + +++L Y DQ +Y M G+
Sbjct: 83 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQ--YIYMVMECGN 139
Query: 175 LD-----KHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLE 229
+D K + P R W L+ +H + +++ DLK +N L+
Sbjct: 140 IDLNSWLKKKKSIDPWERKSYWKNM----------LEAVHTIHQHGIVHSDLKPANFLIV 189
Query: 230 EGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY-----------AMTGQLTFKS 278
+G KL DFG+A + V +GT Y P+ +++ KS
Sbjct: 190 DGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 248
Query: 279 DIYSFGVVLLELITGRKAIDQ 299
D++S G +L + G+ Q
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQ 269
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 25/216 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIK--QLDHRGVQGVREFSAEVMTLGSADHPN--LVKLI 154
+G GG KV++ EK +Q+ AIK L+ Q + + E+ L + +++L
Sbjct: 17 IGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
Y DQ +Y M G++D L+ + +D R + +H+
Sbjct: 76 DYEI-TDQ--YIYMVMECGNID--LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH--- 127
Query: 215 PVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY------ 268
+++ DLK +N L+ +G KL DFG+A + V +GT Y P+
Sbjct: 128 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 186
Query: 269 -----AMTGQLTFKSDIYSFGVVLLELITGRKAIDQ 299
+++ KSD++S G +L + G+ Q
Sbjct: 187 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 222
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 13/107 (12%)
Query: 195 MKIAAGASRGLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVS 254
+ I + +++LH + +++RDLK SNI K+ DFGL ++
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 255 TRVMGTYG----------YCAPDYAMTGQLTFKSDIYSFGVVLLELI 291
M Y Y +P+ + K DI+S G++L EL+
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 92 NFRSDCCLGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVRE-FSAEVMTLGSADHPNL 150
+F C+G GGFG V++ + + AIK++ + RE EV L +HP +
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 66
Query: 151 VKLIGYCAE 159
V+ E
Sbjct: 67 VRYFNAWLE 75
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLG---SADHPNLVKLIG 155
+G+G FG+V K K+ Q VA+K + + + R+ + E+ L D N + +I
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIH 163
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM--KIAAGASRGLQYLHEQLK 213
R + M L +L++L + ++ + K A + L LH K
Sbjct: 164 MLENFTFRNHI--CMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---K 218
Query: 214 QPVIYRDLKCSNILLEEGYHP--KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMT 271
+I+ DLK NILL++ K+ DFG + T + +R Y AP+ +
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVILG 273
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
+ D++S G +L EL+TG
Sbjct: 274 ARYGMPIDMWSLGCILAELLTG 295
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 27/217 (12%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIK--QLDHRGVQGVREFSAEVMTLGSADHPN--LVKLI 154
+G GG KV++ EK +Q+ AIK L+ Q + + E+ L + +++L
Sbjct: 20 IGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 78
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLD-WNTRMKIAAGASRGLQYLHEQLK 213
Y DQ +Y M G++D L+ + +D W + + L+ +H +
Sbjct: 79 DY-EITDQ--YIYMVMECGNID--LNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQ 129
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY----- 268
+++ DLK +N L+ +G KL DFG+A + V +GT Y P+
Sbjct: 130 HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 188
Query: 269 ------AMTGQLTFKSDIYSFGVVLLELITGRKAIDQ 299
+++ KSD++S G +L + G+ Q
Sbjct: 189 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 225
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 27/217 (12%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIK--QLDHRGVQGVREFSAEVMTLGSADHPN--LVKLI 154
+G GG KV++ EK +Q+ AIK L+ Q + + E+ L + +++L
Sbjct: 36 IGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLD-WNTRMKIAAGASRGLQYLHEQLK 213
Y DQ +Y M G++D L+ + +D W + + L+ +H +
Sbjct: 95 DYEI-TDQ--YIYMVMECGNID--LNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQ 145
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY----- 268
+++ DLK +N L+ +G KL DFG+A + V +GT Y P+
Sbjct: 146 HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 204
Query: 269 ------AMTGQLTFKSDIYSFGVVLLELITGRKAIDQ 299
+++ KSD++S G +L + G+ Q
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 20/230 (8%)
Query: 93 FRSDCCLGEGGFGKVYKGCLEKIEQ-VVAIKQLDHRGVQGVREFSAEVMTLGSADHPN-- 149
+ D +G+G FG+V K +++EQ VAIK + ++ + + EV L + +
Sbjct: 56 YEIDSLIGKGSFGQVVKA-YDRVEQEWVAIKIIKNKKA-FLNQAQIEVRLLELMNKHDTE 113
Query: 150 ----LVKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDT--RPLDWNTRMKIAAGASR 203
+V L + + LV+E L +L+DL +T R + N K A
Sbjct: 114 MKYYIVHLKRHFMFRNHLCLVFE-----MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGY 263
L +L + +I+ DLK NILL +PK + G S + + + Y
Sbjct: 169 ALLFLATP-ELSIIHCDLKPENILL---CNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFY 224
Query: 264 CAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKDRKELNLVAWLL 313
+P+ + D++S G +L+E+ TG + ++N + +L
Sbjct: 225 RSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVL 274
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLG---SADHPNLVKLIG 155
+G+G FG+V K K+ Q VA+K + + + R+ + E+ L D N + +I
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIH 163
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM--KIAAGASRGLQYLHEQLK 213
R + M L +L++L + ++ + K A + L LH K
Sbjct: 164 MLENFTFRNHI--CMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---K 218
Query: 214 QPVIYRDLKCSNILLEEGYHP--KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMT 271
+I+ DLK NILL++ K+ DFG + T + +R Y AP+ +
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVILG 273
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
+ D++S G +L EL+TG
Sbjct: 274 ARYGMPIDMWSLGCILAELLTG 295
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 27/217 (12%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIK--QLDHRGVQGVREFSAEVMTLGSADHPN--LVKLI 154
+G GG KV++ EK +Q+ AIK L+ Q + + E+ L + +++L
Sbjct: 16 IGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 74
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLD-WNTRMKIAAGASRGLQYLHEQLK 213
Y DQ +Y M G++D L+ + +D W + + L+ +H +
Sbjct: 75 DY-EITDQ--YIYMVMECGNID--LNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQ 125
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY----- 268
+++ DLK +N L+ +G KL DFG+A + V +GT Y P+
Sbjct: 126 HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 184
Query: 269 ------AMTGQLTFKSDIYSFGVVLLELITGRKAIDQ 299
+++ KSD++S G +L + G+ Q
Sbjct: 185 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 221
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 22/206 (10%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREF------SAEVMTLG--SADHPNL 150
LG GGFG VY G VAIK ++ + E EV+ L S+ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 151 VKLIGYCAEGDQRLLVYEYM-PLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLH 209
++L+ + D +L+ E M P+ + L D + L +++ H
Sbjct: 76 IRLLDWFERPDSFVLILERMEPV----QDLFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 210 EQLKQPVIYRDLKCSNILLEEGY-HPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY 268
V++RD+K NIL++ KL DFG + K V T GT Y P++
Sbjct: 132 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 184
Query: 269 AMTGQLTFKS-DIYSFGVVLLELITG 293
+ +S ++S G++L +++ G
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 27/217 (12%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIK--QLDHRGVQGVREFSAEVMTLGSADHPN--LVKLI 154
+G GG KV++ EK +Q+ AIK L+ Q + + E+ L + +++L
Sbjct: 36 IGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 155 GYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLD-WNTRMKIAAGASRGLQYLHEQLK 213
Y DQ +Y M G++D L+ + +D W + + L+ +H +
Sbjct: 95 DYEI-TDQ--YIYMVMECGNID--LNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQ 145
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDY----- 268
+++ DLK +N L+ +G KL DFG+A V +GT Y P+
Sbjct: 146 HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMS 204
Query: 269 ------AMTGQLTFKSDIYSFGVVLLELITGRKAIDQ 299
+++ KSD++S G +L + G+ Q
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 28/209 (13%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIK----QLDHRGVQGVREFSAEVMTLGSADHPNLVKLI 154
+G G FG +Y G + VAIK + H + +F M G P+ I
Sbjct: 17 IGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYK--MMQGGVGIPS----I 70
Query: 155 GYC-AEGDQRLLVYEYMPLGSLDKHLHDLRPD-TRPLDWNTRMKIAAGASRGLQYLHEQL 212
+C AEGD ++V E L L DL +R T + +A ++Y+H
Sbjct: 71 KWCGAEGDYNVMVMEL-----LGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS-- 123
Query: 213 KQPVIYRDLKCSNILL---EEGYHPKLSDFGLA-KMGPSGDKTHVSTR----VMGTYGYC 264
+ I+RD+K N L+ ++G + DFGLA K + H+ R + GT Y
Sbjct: 124 -KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 182
Query: 265 APDYAMTGQLTFKSDIYSFGVVLLELITG 293
+ + + + + + D+ S G VL+ G
Sbjct: 183 SINTHLGIEQSRRDDLESLGYVLMYFNLG 211
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 94/224 (41%), Gaps = 37/224 (16%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQL--DHRGVQGVREFSAEVMTLGSADHPNLVKLIGY 156
+G G +G V + + ++VVAIK++ + + E+ L +H ++VK++
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI 120
Query: 157 CAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAA---GASRGLQYLHEQLK 213
D Y+ L D D + R + T + I G++Y+H
Sbjct: 121 VIPKDVEKFDELYVVLEIADS---DFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH---S 174
Query: 214 QPVIYRDLKCSNILLEEGYHPKLSDFGLAK-------------MGPSGDKTHVST----- 255
+++RDLK +N L+ + K+ DFGLA+ + P D ++ T
Sbjct: 175 AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTK 234
Query: 256 ----RVMG---TYGYCAPDYAMTGQ-LTFKSDIYSFGVVLLELI 291
++ G T Y AP+ + + T D++S G + EL+
Sbjct: 235 NLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 18/202 (8%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREFSAEVMTLG---SADHPNLVKLIG 155
+G+G FG+V K K+ Q VA+K + + + R+ + E+ L D N + +I
Sbjct: 105 IGKGXFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIH 163
Query: 156 YCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRM--KIAAGASRGLQYLHEQLK 213
R + M L +L++L + ++ + K A + L LH K
Sbjct: 164 MLENFTFRNHI--CMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---K 218
Query: 214 QPVIYRDLKCSNILLEEGYHP--KLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYAMT 271
+I+ DLK NILL++ K+ DFG + + +R Y AP+ +
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRF-----YRAPEVILG 273
Query: 272 GQLTFKSDIYSFGVVLLELITG 293
+ D++S G +L EL+TG
Sbjct: 274 ARYGMPIDMWSLGCILAELLTG 295
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 20/205 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREF------SAEVMTLG--SADHPNL 150
LG GGFG VY G VAIK ++ + E EV+ L S+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 151 VKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
++L+ + D +L+ E P D L D + L +++ H
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH- 127
Query: 211 QLKQPVIYRDLKCSNILLEEGY-HPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
V++RD+K NIL++ KL DFG + K V T GT Y P++
Sbjct: 128 --NXGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 181
Query: 270 MTGQLTFKS-DIYSFGVVLLELITG 293
+ +S ++S G++L +++ G
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 24/207 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQ--LDHRGVQGVREFSAEVMTLGSADHPNLVKLIGY 156
+G G FG +Y G + VAIK + + Q E M G P I +
Sbjct: 17 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPT----IRW 72
Query: 157 C-AEGDQRLLVYEYMPLGSLDKHLHDLRPD-TRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
C AEGD ++V E L L DL +R T + +A ++Y+H +
Sbjct: 73 CGAEGDYNVMVMEL-----LGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS---K 124
Query: 215 PVIYRDLKCSNILL---EEGYHPKLSDFGLA-KMGPSGDKTHVSTR----VMGTYGYCAP 266
I+RD+K N L+ ++G + DFGLA K + H+ R + GT Y +
Sbjct: 125 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 184
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELITG 293
+ + + + + D+ S G VL+ G
Sbjct: 185 NTHLGIEQSRRDDLESLGYVLMYFNLG 211
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPK-LSDFGLAKMGPSGDKTHVSTRVMGTYG 262
GL Y+H + +I+ D+K N+L+E P+ L +A +G + T + T
Sbjct: 143 GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTRE 200
Query: 263 YCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y +P+ + +DI+S ++ ELITG
Sbjct: 201 YRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 24/207 (11%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQ--LDHRGVQGVREFSAEVMTLGSADHPNLVKLIGY 156
+G G FG +Y G + VAIK + + Q E M G P I +
Sbjct: 15 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPT----IRW 70
Query: 157 C-AEGDQRLLVYEYMPLGSLDKHLHDLRPD-TRPLDWNTRMKIAAGASRGLQYLHEQLKQ 214
C AEGD ++V E L L DL +R T + +A ++Y+H +
Sbjct: 71 CGAEGDYNVMVMEL-----LGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS---K 122
Query: 215 PVIYRDLKCSNILL---EEGYHPKLSDFGLA-KMGPSGDKTHVSTR----VMGTYGYCAP 266
I+RD+K N L+ ++G + DFGLA K + H+ R + GT Y +
Sbjct: 123 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 182
Query: 267 DYAMTGQLTFKSDIYSFGVVLLELITG 293
+ + + + + D+ S G VL+ G
Sbjct: 183 NTHLGIEQSRRDDLESLGYVLMYFNLG 209
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 204 GLQYLHEQLKQPVIYRDLKCSNILLEEGYHPK-LSDFGLAKMGPSGDKTHVSTRVMGTYG 262
GL Y+H + +I+ D+K N+L+E P+ L +A +G + T + T
Sbjct: 143 GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTRE 200
Query: 263 YCAPDYAMTGQLTFKSDIYSFGVVLLELITG 293
Y +P+ + +DI+S ++ ELITG
Sbjct: 201 YRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 20/205 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREF------SAEVMTLG--SADHPNL 150
LG GGFG VY G VAIK ++ + E EV+ L S+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 151 VKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
++L+ + D +L+ E P D L D + L +++ H
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH- 160
Query: 211 QLKQPVIYRDLKCSNILLEEGY-HPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
V++RD+K NIL++ KL DFG + K V T GT Y P++
Sbjct: 161 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 214
Query: 270 MTGQLTFKS-DIYSFGVVLLELITG 293
+ +S ++S G++L +++ G
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 20/205 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREF------SAEVMTLG--SADHPNL 150
LG GGFG VY G VAIK ++ + E EV+ L S+ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 151 VKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
++L+ + D +L+ E P D L D + L +++ H
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH- 174
Query: 211 QLKQPVIYRDLKCSNILLEEGY-HPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
V++RD+K NIL++ KL DFG + K V T GT Y P++
Sbjct: 175 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 228
Query: 270 MTGQLTFKS-DIYSFGVVLLELITG 293
+ +S ++S G++L +++ G
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 20/205 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREF------SAEVMTLG--SADHPNL 150
LG GGFG VY G VAIK ++ + E EV+ L S+ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 151 VKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
++L+ + D +L+ E P D L D + L +++ H
Sbjct: 76 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH- 131
Query: 211 QLKQPVIYRDLKCSNILLEEGY-HPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
V++RD+K NIL++ KL DFG + K V T GT Y P++
Sbjct: 132 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 185
Query: 270 MTGQLTFKS-DIYSFGVVLLELITG 293
+ +S ++S G++L +++ G
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 20/205 (9%)
Query: 99 LGEGGFGKVYKGCLEKIEQVVAIKQLDHRGVQGVREF------SAEVMTLG--SADHPNL 150
LG GGFG VY G VAIK ++ + E EV+ L S+ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 151 VKLIGYCAEGDQRLLVYEYMPLGSLDKHLHDLRPDTRPLDWNTRMKIAAGASRGLQYLHE 210
++L+ + D +L+ E P D L D + L +++ H
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHCH- 146
Query: 211 QLKQPVIYRDLKCSNILLEEGY-HPKLSDFGLAKMGPSGDKTHVSTRVMGTYGYCAPDYA 269
V++RD+K NIL++ KL DFG + K V T GT Y P++
Sbjct: 147 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 200
Query: 270 MTGQLTFKS-DIYSFGVVLLELITG 293
+ +S ++S G++L +++ G
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCG 225
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,907,125
Number of Sequences: 62578
Number of extensions: 427940
Number of successful extensions: 3500
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 202
Number of HSP's that attempted gapping in prelim test: 940
Number of HSP's gapped (non-prelim): 1102
length of query: 315
length of database: 14,973,337
effective HSP length: 99
effective length of query: 216
effective length of database: 8,778,115
effective search space: 1896072840
effective search space used: 1896072840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)