Citrus Sinensis ID: 021252

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-----
Protein Sequence
MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGVVPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGLIILSLIMKIFLFTMLCLIEKGVSFFFFNFSYD
Secondary Structure (PSIPRED)
ccccccccccccEEEEcccccccHHHHHHHHHcccccccccccccccccHHHHHHHHHcccccccccccccccccccEEEEccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccEEEEEEEccc
Secondary Structure Prediction (SSPRO)
ccccccccccccEEEEccccccHHHHHHHHHHHcccccccccccccccccHEEEHHHHHHccccccccccccccccEEEEEccccccHHHHHHHHHHHccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEEccc
Coil and Loop (DISEMBL)
mgkkkkrvssKVWCYycdrefddEKILVQHQKakhfkchvchkklstaggMAIHVLQVHKenvtkvpnakpgrestdieiygmqgippdvlaahygeeeeevpskmakvdtsfpqlvggvvpgqlgvsyppqstlgmmqpiyssavpvppagwpvpprpqpwypqhaavsipppaavgyaqqplfpvqnvrpplasstspalqpspvvppgmpsstppvtvsqplfpvvnnnttsqsslfsapipstsialsssaeikgsvdahssantsvtnsyhvpsmQGLIILSLIMKIFLFTMLCLIEKGVSFFFFNFSYD
Flexible Loop (DISEMBL)
mgkkkkrvsskvWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHkenvtkvpnakpgrESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGVVPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGLIILSLIMKIFLFTMLCLIEKGVSFFFFNFSYD
Low Complexity Region (SEG)
MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFpqlvggvvpgqlgvSYPPQSTLGMMQPIYSSavpvppagwpvpprpqpwypqHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALqpspvvppgmpsstppvtvsqpLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGLIILSLIMKIFLFTMLCLIEKGVSFFFFNFSYD
Disordered region (IsUnstruct)
**********KVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVT*************IEIYGMQGIPPDVLAAHY*****************FPQLVGGVVPGQLGVSYP****LGMMQPIYSSAVPV***GW********WYPQHAAVSI***AAVGYAQ**L*****************************************************************************************SYHVPSMQGLIILSLIMKIFLFTMLCLIEKGVSFFFFNFS**
Disordered Region (DISOPRED)
*********SKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVT*******GRESTDIEIYGMQGIPPDV*************************************************************************************************************************************************************************************************IILSLIMKIFLFTMLCLIEKGVSFFFFNFSYD
Disordered Region (DISEMBL)
**********KVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYG**********AKVDTSFPQLVGGVVPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVR************PSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGLIILSLIMKIFLFTMLCLIEKGVSFFFFNFSYD
Disordered Region (DISPRO)
********SSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE****************************SYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV*******************************************NSYHVPSMQGLIILSLIMKIFLFTMLCLIEKGVSFFFFNFSYD
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooo
TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGVVPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGLIILSLIMKIFLFTMLCLIEKGVSFFFFNFSYD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	315	2.2.26 [Sep-21-2011]
O43670	478	Zinc finger protein 207 O	yes	no	0.273	0.179	0.678	3e-33
Q5R8K4	494	Zinc finger protein 207 O	yes	no	0.273	0.174	0.678	1e-32
P16952	1500	Agglutinin receptor OS=St	yes	no	0.317	0.066	0.288	0.0007

>sp|O43670|ZN207_HUMAN Zinc finger protein 207 OS=Homo sapiens GN=ZNF207 PE=1 SV=1

 Score =  142 bits (358), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 59/87 (67%), Positives = 72/87 (82%), Gaps = 1/87 (1%)

Query: 1  MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
          MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct: 1  MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query: 61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
          E +  VPNA PGR   ++EIYGM+GIP
Sbjct: 60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

Homo sapiens (taxid: 9606)

>sp|Q5R8K4|ZN207_PONAB Zinc finger protein 207 OS=Pongo abelii GN=ZNF207 PE=2 SV=1

 Score =  140 bits (353), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 59/87 (67%), Positives = 71/87 (81%), Gaps = 1/87 (1%)

Query: 1  MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
          MG+KKK+   K WC+YC+R+FDDEKIL QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct: 1  MGRKKKK-QLKPWCWYCNRDFDDEKILTQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query: 61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
          E +  VPNA PGR   ++EIYGM+GIP
Sbjct: 60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

Pongo abelii (taxid: 9601)

>sp|P16952|SSP5_STRGN Agglutinin receptor OS=Streptococcus gordonii GN=ssp5 PE=1 SV=2

 Score = 45.1 bits (105), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 49/125 (39%), Gaps = 25/125 (20%)

Query: 125 LGVSYPPQSTLGMMQPIYSSAVPVPPA-------GWPVPP-----RPQPWYPQHAAVSI- 171
           +GV   P +     QP+Y +  P+ PA         P PP     +P+P  P+       
Sbjct: 754 IGVPTKPVAPTAPTQPMYETEKPLEPAPVAPSYENEPTPPVKTPDQPEPSKPEEPTYETE 813

Query: 172 ----PPPAAVGYAQQPLFPVQNVRPPLAS-------STSPALQPSPVVPPGMPSSTPPVT 220
               P P A  Y  +P  PV+    P  S        T   L+P+PV P      TPPV 
Sbjct: 814 KPLEPAPVAPSYENEPTPPVKTPDQPEPSKPEEPNYETEKPLEPAPVAPSYENEPTPPVK 873

Query: 221 V-SQP 224
           +  QP
Sbjct: 874 IPDQP 878

May bind sialic acid residues of salivary agglutinin (SAG) in a calcium-dependent reaction. The interaction of SAG with its receptor in various oral streptococci modulate bacterial colonization of oral tissue and is associated with reduced levels of dental caries.

Streptococcus gordonii (taxid: 1302)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	315
255574492	290	conserved hypothetical protein [Ricinus	0.920	1.0	0.741	1e-118
224074127	385	predicted protein [Populus trichocarpa]	0.857	0.701	0.724	1e-111
357521467	374	Zinc finger protein [Medicago truncatula	0.879	0.740	0.694	2e-99
357521469	465	Zinc finger protein [Medicago truncatula	0.879	0.595	0.694	5e-99
297738020	375	unnamed protein product [Vitis vinifera]	0.892	0.749	0.690	3e-98
225423609	362	PREDICTED: uncharacterized protein LOC10	0.873	0.759	0.683	5e-98
224138544	363	predicted protein [Populus trichocarpa]	0.860	0.746	0.728	1e-95
356524642	359	PREDICTED: uncharacterized protein LOC10	0.822	0.721	0.736	1e-95
356524640	371	PREDICTED: uncharacterized protein LOC10	0.822	0.698	0.736	2e-95
356513020	371	PREDICTED: uncharacterized protein LOC10	0.822	0.698	0.721	5e-93

>gi|255574492|ref|XP_002528158.1| conserved hypothetical protein [Ricinus communis] gi|223532456|gb|EEF34249.1| conserved hypothetical protein [Ricinus communis]

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/294 (74%), Positives = 246/294 (83%), Gaps = 4/294 (1%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRV+SKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRVASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E++TKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYG+EEE+ PSK+AKVD   P  +GG+
Sbjct: 61  ESITKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGDEEEDNPSKVAKVD--LPSPLGGI 118

Query: 121 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 180
           +PG +GV YPPQ TLG++QPIYSS VPVPPAGWPVP RPQPW+ Q  AVSIP  A  GYA
Sbjct: 119 MPGPVGVGYPPQ-TLGVVQPIYSSVVPVPPAGWPVPSRPQPWFSQPPAVSIPSTAPTGYA 177

Query: 181 QQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLF 240
           QQPLFPVQNVRPPL S+TSPALQ S V PPG+PSSTPP+ VSQPLFPV++NN   QSS F
Sbjct: 178 QQPLFPVQNVRPPLPSATSPALQLSQVAPPGLPSSTPPIPVSQPLFPVISNN-LPQSSPF 236

Query: 241 SAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGLIILSLIMKIFL 294
           S  +P+ +I  S+  E+KGSVD  S AN S+T SYH P + GLI   L++   +
Sbjct: 237 STHLPTPNIPSSTLGEVKGSVDVLSGANNSLTTSYHTPGIPGLITCPLLIDTRI 290

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224074127|ref|XP_002304263.1| predicted protein [Populus trichocarpa] gi|222841695|gb|EEE79242.1| predicted protein [Populus trichocarpa]

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/290 (72%), Positives = 229/290 (78%), Gaps = 20/290 (6%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKR +SKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRAASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E+VTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE+E PSK AKVD    QLVGG+
Sbjct: 61  ESVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEDENPSKAAKVDIPSAQLVGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQP---------------IYSSAVPVPPAGWPVPPRPQPWYPQ 165
           VPG LG  YPP+  L  MQP               +Y+SAVP P AGWPVPPR Q W PQ
Sbjct: 121 VPGPLGAGYPPRP-LAAMQPMSGPCTLGPVKLWNYLYNSAVPAPHAGWPVPPRSQHWLPQ 179

Query: 166 HAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPL 225
           H AVSIPPPA + Y QQPLFPVQNVRPP+ S+ +PAL PS V PPG+PSSTP  +VSQPL
Sbjct: 180 HPAVSIPPPAPITYTQQPLFPVQNVRPPVPSTMTPALIPSQVTPPGLPSSTP--SVSQPL 237

Query: 226 FPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSY 275
           FPV  NN   QSS FSAP PSTS+  SS AE++GS++ H   NTS+T  Y
Sbjct: 238 FPV--NNNLPQSSTFSAPFPSTSLLPSSPAEVRGSMNVHLGVNTSMTTGY 285

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357521467|ref|XP_003631022.1| Zinc finger protein [Medicago truncatula] gi|355525044|gb|AET05498.1| Zinc finger protein [Medicago truncatula]

 Score =  368 bits (945), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 202/291 (69%), Positives = 230/291 (79%), Gaps = 14/291 (4%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MG+KKKRV+SKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGM+IHVLQVHK
Sbjct: 1   MGRKKKRVASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMSIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           ENVTKVPNAKPGREST+IEIYGMQGIPPDVLAAHYG+E+++VPSK AKVD       GG+
Sbjct: 61  ENVTKVPNAKPGRESTEIEIYGMQGIPPDVLAAHYGDEDDDVPSKTAKVDIPSTPFAGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWP-VPPRPQPWYPQHAAVSIPPPAAVGY 179
           VP  +G  YPP+ST+G ++PIY+ AVP PP  W  VPPRPQPW+PQ   VS+  P  V Y
Sbjct: 121 VPPPMGTGYPPRSTMGPIRPIYNPAVPGPPNAWGVVPPRPQPWFPQPPTVSM--PPPVQY 178

Query: 180 AQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV-NNNTTSQSS 238
            QQPLFPVQNVRPPL S+TSPALQ S + PPG+PSSTPPV VSQPLFPVV NN+  +QSS
Sbjct: 179 PQQPLFPVQNVRPPLPSTTSPALQ-SQITPPGLPSSTPPVPVSQPLFPVVGNNHMATQSS 237

Query: 239 LFSAP-----IPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGLI 284
            FSA      +PS +  LSS+  I    DAH   N+SVT+SY    + G I
Sbjct: 238 PFSAAPMSSSVPSITPGLSSNVPI----DAHLGINSSVTSSYQAIGIPGGI 284

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357521469|ref|XP_003631023.1| Zinc finger protein [Medicago truncatula] gi|355525045|gb|AET05499.1| Zinc finger protein [Medicago truncatula]

 Score =  367 bits (941), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 202/291 (69%), Positives = 230/291 (79%), Gaps = 14/291 (4%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MG+KKKRV+SKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGM+IHVLQVHK
Sbjct: 1   MGRKKKRVASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMSIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           ENVTKVPNAKPGREST+IEIYGMQGIPPDVLAAHYG+E+++VPSK AKVD       GG+
Sbjct: 61  ENVTKVPNAKPGRESTEIEIYGMQGIPPDVLAAHYGDEDDDVPSKTAKVDIPSTPFAGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWP-VPPRPQPWYPQHAAVSIPPPAAVGY 179
           VP  +G  YPP+ST+G ++PIY+ AVP PP  W  VPPRPQPW+PQ   VS+  P  V Y
Sbjct: 121 VPPPMGTGYPPRSTMGPIRPIYNPAVPGPPNAWGVVPPRPQPWFPQPPTVSM--PPPVQY 178

Query: 180 AQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV-NNNTTSQSS 238
            QQPLFPVQNVRPPL S+TSPALQ S + PPG+PSSTPPV VSQPLFPVV NN+  +QSS
Sbjct: 179 PQQPLFPVQNVRPPLPSTTSPALQ-SQITPPGLPSSTPPVPVSQPLFPVVGNNHMATQSS 237

Query: 239 LFSAP-----IPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGLI 284
            FSA      +PS +  LSS+  I    DAH   N+SVT+SY    + G I
Sbjct: 238 PFSAAPMSSSVPSITPGLSSNVPI----DAHLGINSSVTSSYQAIGIPGGI 284

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738020|emb|CBI27221.3| unnamed protein product [Vitis vinifera]

 Score =  364 bits (934), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 196/284 (69%), Positives = 232/284 (81%), Gaps = 3/284 (1%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRV++KVWCYYCDREF+DEKILVQHQKAKHFKCHVCHKKLSTAGGM IHVLQVHK
Sbjct: 1   MGKKKKRVAAKVWCYYCDREFEDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E V+KVPNAKPGREST+IEIYGM+GIP ++LAAHYGEE+E+VPSK+AKV+    QL GG 
Sbjct: 61  ETVSKVPNAKPGRESTEIEIYGMEGIPHEILAAHYGEEDEDVPSKLAKVEIPSSQLGGGA 120

Query: 121 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 180
           VPG LG+  PPQ  LG M P+Y+ A+ VPPAGWPVP RPQPWY QH A+SI PPA +G  
Sbjct: 121 VPGTLGIGVPPQPALGAMPPVYNPALAVPPAGWPVPARPQPWYSQHPAISI-PPAPLGMT 179

Query: 181 QQPLFPVQNVRPPLASSTSPALQPS-PVVPPGMPSSTPPVTVSQPLFPV-VNNNTTSQSS 238
           QQPLFP+Q V+PPL S+ S ALQPS  + PPG+P  +P   + QPLFPV VNNN  +++S
Sbjct: 180 QQPLFPIQPVKPPLPSTMSSALQPSLQITPPGLPIPSPSAPLPQPLFPVGVNNNLPTKNS 239

Query: 239 LFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQG 282
            FS P+ STSI LSS AE+  S++AHSS N+S+ +SY  PS+QG
Sbjct: 240 PFSTPMLSTSIPLSSQAELNSSIEAHSSTNSSLASSYSAPSIQG 283

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225423609|ref|XP_002274291.1| PREDICTED: uncharacterized protein LOC100266425 [Vitis vinifera]

 Score =  363 bits (932), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 190/278 (68%), Positives = 225/278 (80%), Gaps = 3/278 (1%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRV++KVWCYYCDREF+DEKILVQHQKAKHFKCHVCHKKLSTAGGM IHVLQVHK
Sbjct: 1   MGKKKKRVAAKVWCYYCDREFEDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E V+KVPNAKPGREST+IEIYGM+GIP ++LAAHYGEE+E+VPSK+AKV+    QL GG 
Sbjct: 61  ETVSKVPNAKPGRESTEIEIYGMEGIPHEILAAHYGEEDEDVPSKLAKVEIPSSQLGGGA 120

Query: 121 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 180
           VPG LG+  PPQ  LG M P+Y+ A+ VPPAGWPVP RPQPWY QH A+SI PPA +G  
Sbjct: 121 VPGTLGIGVPPQPALGAMPPVYNPALAVPPAGWPVPARPQPWYSQHPAISI-PPAPLGMT 179

Query: 181 QQPLFPVQNVRPPLASSTSPALQPS-PVVPPGMPSSTPPVTVSQPLFPV-VNNNTTSQSS 238
           QQPLFP+Q V+PPL S+ S ALQPS  + PPG+P  +P   + QPLFPV VNNN  +++S
Sbjct: 180 QQPLFPIQPVKPPLPSTMSSALQPSLQITPPGLPIPSPSAPLPQPLFPVGVNNNLPTKNS 239

Query: 239 LFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYH 276
            FS P+ STSI LSS AE+  S++AHSS N+  + + H
Sbjct: 240 PFSTPMLSTSIPLSSQAELNSSIEAHSSTNSGPSINSH 277

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224138544|ref|XP_002326629.1| predicted protein [Populus trichocarpa] gi|222833951|gb|EEE72428.1| predicted protein [Populus trichocarpa]

 Score =  355 bits (911), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 201/276 (72%), Positives = 224/276 (81%), Gaps = 5/276 (1%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E+VTKVPNAKPGRESTDIEIYGMQGIPPDVLA+HYG++E+E PSK AK D    Q +GG+
Sbjct: 61  ESVTKVPNAKPGRESTDIEIYGMQGIPPDVLASHYGDDEDETPSKAAKGDIPSAQRIGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQPIYSSAVPV-PPAGWPVPPRPQPWYPQHAAVSIPPPAAVGY 179
           +PG L   YPPQ  LG MQPI  + +P   P    +PPRPQPW+P H AVSI P A + Y
Sbjct: 121 MPGPLSTGYPPQP-LGAMQPIGPTLIPAYTPTKNEIPPRPQPWFPTHPAVSISPSAPIAY 179

Query: 180 AQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSL 239
           AQQPLFPVQN+RPP+ S+TS AL PS   PPG+PSSTPP  VSQPLFPVVNNN   QSS 
Sbjct: 180 AQQPLFPVQNMRPPVPSTTSIALPPSQTPPPGLPSSTPP--VSQPLFPVVNNN-LPQSSP 236

Query: 240 FSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSY 275
           FSAP+P TSI+ SS  E+KGSV+ HS  N+S+T  Y
Sbjct: 237 FSAPLPPTSISSSSPGEVKGSVNVHSGVNSSMTTGY 272

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524642|ref|XP_003530937.1| PREDICTED: uncharacterized protein LOC100819009 isoform 2 [Glycine max]

 Score =  355 bits (911), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 196/266 (73%), Positives = 220/266 (82%), Gaps = 7/266 (2%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E+VTKVPNAKPGRESTDIEIYGMQGIPPD+LAAHYGEEE++VPSK AKVD    QLVGG+
Sbjct: 61  ESVTKVPNAKPGRESTDIEIYGMQGIPPDILAAHYGEEEDDVPSKAAKVDIPPTQLVGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 180
           +P  LG  YPP+ TL  M P+Y+ AVPVPP  W VPPRPQPW+ Q  AVS+PP  A  Y 
Sbjct: 121 IPPPLGTGYPPRPTLPTMPPMYNPAVPVPPNAWMVPPRPQPWFSQPPAVSVPP--AAPYT 178

Query: 181 QQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV-NNNTTSQSSL 239
           QQPLFPVQNVRPPL  +T+PALQ + + PPG+P+S  PV VSQPLFPVV NN+TT+QSS 
Sbjct: 179 QQPLFPVQNVRPPLP-ATAPALQ-TQITPPGLPTSA-PVPVSQPLFPVVGNNHTTTQSST 235

Query: 240 FSA-PIPSTSIALSSSAEIKGSVDAH 264
           FSA P+PS+  +++S       VD H
Sbjct: 236 FSAPPLPSSVPSVTSVMSANVPVDTH 261

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524640|ref|XP_003530936.1| PREDICTED: uncharacterized protein LOC100819009 isoform 1 [Glycine max]

 Score =  355 bits (911), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 196/266 (73%), Positives = 220/266 (82%), Gaps = 7/266 (2%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E+VTKVPNAKPGRESTDIEIYGMQGIPPD+LAAHYGEEE++VPSK AKVD    QLVGG+
Sbjct: 61  ESVTKVPNAKPGRESTDIEIYGMQGIPPDILAAHYGEEEDDVPSKAAKVDIPPTQLVGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 180
           +P  LG  YPP+ TL  M P+Y+ AVPVPP  W VPPRPQPW+ Q  AVS+PP  A  Y 
Sbjct: 121 IPPPLGTGYPPRPTLPTMPPMYNPAVPVPPNAWMVPPRPQPWFSQPPAVSVPP--AAPYT 178

Query: 181 QQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV-NNNTTSQSSL 239
           QQPLFPVQNVRPPL  +T+PALQ + + PPG+P+S  PV VSQPLFPVV NN+TT+QSS 
Sbjct: 179 QQPLFPVQNVRPPL-PATAPALQ-TQITPPGLPTSA-PVPVSQPLFPVVGNNHTTTQSST 235

Query: 240 FSA-PIPSTSIALSSSAEIKGSVDAH 264
           FSA P+PS+  +++S       VD H
Sbjct: 236 FSAPPLPSSVPSVTSVMSANVPVDTH 261

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513020|ref|XP_003525212.1| PREDICTED: uncharacterized protein LOC100789368 [Glycine max]

 Score =  347 bits (889), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 192/266 (72%), Positives = 216/266 (81%), Gaps = 7/266 (2%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E+VTKVPNAKPGRESTDIEIYGMQGIPPD+LAAHYGEEE++VPSK AKVD    QLVGG+
Sbjct: 61  ESVTKVPNAKPGRESTDIEIYGMQGIPPDILAAHYGEEEDDVPSKAAKVDIPPTQLVGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 180
           +P  LG  YP +  L  M P+Y+ AVPVPP  W VPPRPQPW+ Q   VS+PP  A  Y 
Sbjct: 121 IPPPLGTGYPSRPALPTMPPVYNPAVPVPPNAWVVPPRPQPWFSQPPVVSVPP--AAPYT 178

Query: 181 QQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV-NNNTTSQSSL 239
           QQPLFPVQNVRPPL  +T+PALQ + + PPG+P+S  PV VSQPLFPVV NN+TT+QSS 
Sbjct: 179 QQPLFPVQNVRPPL-PATAPALQ-TQITPPGLPTSA-PVPVSQPLFPVVGNNHTTTQSSA 235

Query: 240 FSA-PIPSTSIALSSSAEIKGSVDAH 264
           FSA P+PS+  +++        VD H
Sbjct: 236 FSAPPLPSSVPSVTPVMSTNVPVDTH 261

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	315
TAIR|locus:2015776	367	SUF4 "suppressor of FRIGIDA4"	0.447	0.384	0.715	4.8e-66
UNIPROTKB|E2RI65	457	ZNF207 "Uncharacterized protei	0.273	0.188	0.678	1e-37
WB|WBGene00007105	341	B0035.1 [Caenorhabditis elegan	0.336	0.310	0.581	1.5e-35
UNIPROTKB|J3QRS9	493	ZNF207 "Zinc finger protein 20	0.444	0.283	0.468	5e-35
FB|FBgn0032600	562	CG17912 [Drosophila melanogast	0.295	0.165	0.659	1.2e-34
UNIPROTKB|E1C275	465	E1C275 "Uncharacterized protei	0.273	0.184	0.678	1.3e-34
UNIPROTKB|F1RKW7	464	ZNF207 "Uncharacterized protei	0.273	0.185	0.678	1.3e-34
ZFIN|ZDB-GENE-040426-2273	437	znf207a "zinc finger protein 2	0.273	0.196	0.678	1.3e-34
UNIPROTKB|F1MVH9	420	ZNF207 "Uncharacterized protei	0.273	0.204	0.678	1.3e-34
UNIPROTKB|F1PRK3	494	ZNF207 "Uncharacterized protei	0.444	0.283	0.468	1.7e-34

TAIR|locus:2015776 SUF4 "suppressor of FRIGIDA4" [Arabidopsis thaliana (taxid:3702)]

 Score = 539 (194.8 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
 Identities = 103/144 (71%), Positives = 112/144 (77%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MGKKKKR + KVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTA GM IHVLQVHK
Sbjct:     1 MGKKKKRATEKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTASGMVIHVLQVHK 60

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFXXXXXXX 120
             ENVTKVPNAK GR+STDIEIYGMQGIPP VL AHYGEEE+E P+K+AKV+          
Sbjct:    61 ENVTKVPNAKDGRDSTDIEIYGMQGIPPHVLTAHYGEEEDEPPAKVAKVEIP-SAPLGGV 119

Query:   121 XXXXXXXSYPPQSTLGMM--QPIY 142
                     YPPQ   G +  +P+Y
Sbjct:   120 VPRPYGMVYPPQQVPGAVPARPMY 143

GO:0003677 "DNA binding" evidence=IEA;IDA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP;TAS

GO:0009910 "negative regulation of flower development" evidence=IGI

GO:0005515 "protein binding" evidence=IPI

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0046982 "protein heterodimerization activity" evidence=IPI

UNIPROTKB|E2RI65 ZNF207 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 347 (127.2 bits), Expect = 1.0e-37, Sum P(3) = 1.0e-37
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             E +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

WB|WBGene00007105 B0035.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 360 (131.8 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
 Identities = 64/110 (58%), Positives = 84/110 (76%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+V  K WC+YC+REFDDEKIL+QHQKAKHFKCH+CHKKL +  G++IH +QVHK
Sbjct:     1 MGRKKKKVD-KPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLFSGPGLSIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVD 110
             E + K+P A  GR++  +EIYGMQGIP     A+ G  +EE   K +++D
Sbjct:    60 ETIDKIPAAVHGRDNIHVEIYGMQGIPS---GAYRGAADEEPDEKRSRMD 106

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|J3QRS9 ZNF207 "Zinc finger protein 207" [Homo sapiens (taxid:9606)]

 Score = 349 (127.9 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
 Identities = 67/143 (46%), Positives = 87/143 (60%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYG--EEEEEVPSKMAKVDTSFXXXXX 118
             E +  VPNA PGR   ++EIYGM+GIP   +       E++ +   K  + D S      
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDD 119

Query:   119 XXXXXXXXXSYPPQSTLGMMQPI 141
                        P Q   G + P+
Sbjct:   120 DSAASTSFQPQPVQPQQGYIPPM 142

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

FB|FBgn0032600 CG17912 [Drosophila melanogaster (taxid:7227)]

 Score = 358 (131.1 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
 Identities = 62/94 (65%), Positives = 77/94 (81%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+ +SK WC+YC+REFDDEKILVQHQKAKHFKCH+CHKKL T  G++IH +QVHK
Sbjct:     1 MGRKKKK-ASKPWCWYCNREFDDEKILVQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAH 94
             E V KVPN+ P R + ++EI+GM GIP + L  H
Sbjct:    60 ETVDKVPNSLPNRSNIEVEIFGMDGIPAEDLRDH 93

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|E1C275 E1C275 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 347 (127.2 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             E +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008201 "heparin binding" evidence=IEA

UNIPROTKB|F1RKW7 ZNF207 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 347 (127.2 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             E +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

GO:0008201 "heparin binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-040426-2273 znf207a "zinc finger protein 207, a" [Danio rerio (taxid:7955)]

 Score = 347 (127.2 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QMKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             E +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 ETIDGVPNAIPGRTDIELEIYGMEGIP 86

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1MVH9 ZNF207 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 347 (127.2 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             E +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

GO:0008201 "heparin binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1PRK3 ZNF207 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 349 (127.9 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
 Identities = 67/143 (46%), Positives = 87/143 (60%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYG--EEEEEVPSKMAKVDTSFXXXXX 118
             E +  VPNA PGR   ++EIYGM+GIP   +       E++ +   K  + D S      
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDD 119

Query:   119 XXXXXXXXXSYPPQSTLGMMQPI 141
                        P Q   G + P+
Sbjct:   120 DSAASTSFQPQPVQPQQGYIPPM 142

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	315
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	4e-05
PRK14950	585	PRK14950, PRK14950, DNA polymerase III subunits ga	2e-04
PRK14951	618	PRK14951, PRK14951, DNA polymerase III subunits ga	3e-04
PRK03427	333	PRK03427, PRK03427, cell division protein ZipA; Pr	7e-04
PHA03378	991	PHA03378, PHA03378, EBNA-3B; Provisional	0.001
PHA03378	991	PHA03378, PHA03378, EBNA-3B; Provisional	0.002
pfam09770	804	pfam09770, PAT1, Topoisomerase II-associated prote	0.002
pfam03153	332	pfam03153, TFIIA, Transcription factor IIA, alpha/	0.002
PRK14971	614	PRK14971, PRK14971, DNA polymerase III subunits ga	0.002
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	0.004

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 45.3 bits (107), Expect = 4e-05
 Identities = 28/134 (20%), Positives = 39/134 (29%), Gaps = 8/134 (5%)

Query: 140  PIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASST- 198
             + S A P PP   P  P P        A  +PP  A      P  P     P + +   
Sbjct: 2694 SLTSLADPPPPPPTP-EPAPHALVS---ATPLPPGPAAARQASPALPAAPAPPAVPAGPA 2749

Query: 199  ---SPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSA 255
                PA    P    G P+  PP   +      +     +  S     +PS        A
Sbjct: 2750 TPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPA 2809

Query: 256  EIKGSVDAHSSANT 269
             +     A   A +
Sbjct: 2810 AVLAPAAALPPAAS 2823

Length = 3151

>gnl|CDD|237864 PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional

 Score = 42.9 bits (101), Expect = 2e-04
 Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 1/73 (1%)

Query: 145 AVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQP 204
            VP P    P    P P  P   A S  P AA      P  PV+    P      P   P
Sbjct: 362 PVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPP 420

Query: 205 SPVVPPGMPSSTP 217
            P  P   P  T 
Sbjct: 421 VPHTPESAPKLTR 433

Length = 585

>gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional

 Score = 42.0 bits (99), Expect = 3e-04
 Identities = 21/86 (24%), Positives = 28/86 (32%), Gaps = 2/86 (2%)

Query: 139 QPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASST 198
               +SA   PPA  P  P   P     A  + P  A    A  P  P Q     +A   
Sbjct: 407 PAAAASAPAAPPAAAPPAPVAAP--AAAAPAAAPAAAPAAVALAPAPPAQAAPETVAIPV 464

Query: 199 SPALQPSPVVPPGMPSSTPPVTVSQP 224
             A +P+       P++ P      P
Sbjct: 465 RVAPEPAVASAAPAPAAAPAAARLTP 490

Length = 618

>gnl|CDD|235124 PRK03427, PRK03427, cell division protein ZipA; Provisional

 Score = 40.4 bits (95), Expect = 7e-04
 Identities = 26/108 (24%), Positives = 33/108 (30%), Gaps = 2/108 (1%)

Query: 130 PPQSTLGMMQPIYSSAVPVPPAGWPV-PPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQ 188
              S     QP Y+SA P  P   P     P    P+ A  +  P     Y  QP  P+Q
Sbjct: 84  ARPSPQHQYQPPYASAQPRQPVQQPPEAQVPPQHAPRPAQPAPQPVQQPAYQPQPEQPLQ 143

Query: 189 NVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQ 236
               P  +     +  +P           PV   QP  PV        
Sbjct: 144 QPVSPQVAPAPQPVHSAPQPAQQAFQPAEPVAAPQPE-PVAEPAPVMD 190

Length = 333

>gnl|CDD|223065 PHA03378, PHA03378, EBNA-3B; Provisional

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 33/97 (34%), Positives = 40/97 (41%), Gaps = 11/97 (11%)

Query: 130 PPQSTLGMMQPIYSSAVPV-PPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQ 188
           PP +  G  Q   ++     PPA  P   RP    P  A    PP AA G A+ P     
Sbjct: 706 PPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRAR---PPAAAPGRARPPAAAPG 762

Query: 189 NVRPPLASSTSPALQPSPVVPP-------GMPSSTPP 218
             RPP A+  +P  QP P  PP       G P+  PP
Sbjct: 763 RARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPP 799

Length = 991

>gnl|CDD|223065 PHA03378, PHA03378, EBNA-3B; Provisional

 Score = 39.7 bits (92), Expect = 0.002
 Identities = 32/106 (30%), Positives = 39/106 (36%), Gaps = 13/106 (12%)

Query: 122 PGQLGVSYPPQSTLGMMQPIYSSAVPV-PPAGWPVPPRPQPWYPQHAAVSIPPPAAV-GY 179
           P       P Q   G MQP   +  P+ PPA  P   +     P  A     PPAA  G 
Sbjct: 678 PTGANTMLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQR----PAAATGRARPPAAAPGR 733

Query: 180 AQQPLFPVQNVRPPLASST-------SPALQPSPVVPPGMPSSTPP 218
           A+ P       RPP A+         +P     P   PG P+  PP
Sbjct: 734 ARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPP 779

Length = 991

>gnl|CDD|220392 pfam09770, PAT1, Topoisomerase II-associated protein PAT1

 Score = 39.8 bits (93), Expect = 0.002
 Identities = 37/168 (22%), Positives = 45/168 (26%), Gaps = 22/168 (13%)

Query: 130 PPQSTLGMMQP----IYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLF 185
           P Q     M P          P  P G+P PP+  P   Q       P  A     QP  
Sbjct: 176 PQQVLPQGMPPRQAAFPQQGPPEQPPGYPQPPQGHPEQVQPQQFLPAPSQA---PAQPPL 232

Query: 186 PVQ--NVRPPLASSTSPALQ----PSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSL 239
           P Q     PPL     P L     P P  PP      PP   +QP  P  N  T      
Sbjct: 233 PPQLPQQPPPLQQPQFPGLSQQMPPPPPQPPQQ-QQQPPQPQAQP--PPQNQPTPHPGLP 289

Query: 240 FSA------PIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQ 281
                    P     + L    + +            ++        Q
Sbjct: 290 QGQNAPLPPPQQPQLLPLVQQPQGQQRGPQFREQLVQLSQQQREALSQ 337

Members of this family are necessary for accurate chromosome transmission during cell division. Length = 804

>gnl|CDD|217392 pfam03153, TFIIA, Transcription factor IIA, alpha/beta subunit

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 26/151 (17%), Positives = 38/151 (25%), Gaps = 7/151 (4%)

Query: 137 MMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLAS 196
           + Q   S     P    P  P P    PQ      P  A            Q+  P  + 
Sbjct: 39  LSQ---SGVAEFPWDPSPQAPPPVAQLPQPLPQPPPTQALQALPAGD--QQQHNTPTGSP 93

Query: 197 STSPALQPS-PVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSA 255
           + +P    + P  P G    T P  +     PV+     + S L           L    
Sbjct: 94  AANPPATFALPAGPAGPTIQTEPGQLYPVQVPVMVTQNPANSPLDQPAQQRALQQLQQRY 153

Query: 256 EIKGSVDAHSSANTSVTN-SYHVPSMQGLII 285
               S    S   ++  N    +        
Sbjct: 154 GAPASGQLPSQQQSAQKNDESQLQQQPNGET 184

Transcription initiation factor IIA (TFIIA) is a heterotrimer, the three subunits being known as alpha, beta, and gamma, in order of molecular weight. The N and C-terminal domains of the gamma subunit are represented in pfam02268 and pfam02751, respectively. This family represents the precursor that yields both the alpha and beta subunits. The TFIIA heterotrimer is an essential general transcription initiation factor for the expression of genes transcribed by RNA polymerase II. Together with TFIID, TFIIA binds to the promoter region; this is the first step in the formation of a pre-initiation complex (PIC). Binding of the rest of the transcription machinery follows this step. After initiation, the PIC does not completely dissociate from the promoter. Some components, including TFIIA, remain attached and re-initiate a subsequent round of transcription. Length = 332

>gnl|CDD|237874 PRK14971, PRK14971, DNA polymerase III subunits gamma and tau; Provisional

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 17/95 (17%), Positives = 30/95 (31%), Gaps = 4/95 (4%)

Query: 130 PPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQ- 188
             +     ++P+++     P         P P     ++ +  P A     Q    P   
Sbjct: 371 GGRGPKQHIKPVFTQPAAAPQPSAAAAASPSP---SQSSAAAQPSAPQSATQPAGTPPTV 427

Query: 189 NVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQ 223
           +V PP A   +P       V P        + VS+
Sbjct: 428 SVDPPAAVPVNPPSTAPQAVRPAQFKEEKKIPVSK 462

Length = 614

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 38.8 bits (90), Expect = 0.004
 Identities = 35/132 (26%), Positives = 44/132 (33%), Gaps = 16/132 (12%)

Query: 130  PPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQN 189
              +ST     P      P  P   P PP+PQP  P       PPP      Q PL P   
Sbjct: 2891 VSRSTESFALPPDQPERPPQPQA-PPPPQPQPQPPP-PPQPQPPPPPPPRPQPPLAP--- 2945

Query: 190  VRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLF------PVVNNNTTSQSSLFSAP 243
                  +  + A +PS  VP     +  P  V+ P F      P      +S   L    
Sbjct: 2946 -----TTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHS 3000

Query: 244  IPSTSIALSSSA 255
            +   S   SS A
Sbjct: 3001 LSRVSSWASSLA 3012

Length = 3151

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	315
KOG2893	341	consensus Zn finger protein [General function pred	99.72
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.66
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.55
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.32
KOG3576	267	consensus Ovo and related transcription factors [T	99.26
KOG3576	267	consensus Ovo and related transcription factors [T	99.13
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.05
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.83
PHA00733	128	hypothetical protein	98.78
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.77
KOG3608	467	consensus Zn finger proteins [General function pre	98.63
KOG3608	467	consensus Zn finger proteins [General function pre	98.55
PHA02768	55	hypothetical protein; Provisional	98.52
PHA00733	128	hypothetical protein	98.41
PHA02768	55	hypothetical protein; Provisional	98.4
PLN03086	567	PRLI-interacting factor K; Provisional	98.29
KOG3993	500	consensus Transcription factor (contains Zn finger	98.23
PHA00732	79	hypothetical protein	97.96
PHA00732	79	hypothetical protein	97.92
PHA00616	44	hypothetical protein	97.91
KOG3993	500	consensus Transcription factor (contains Zn finger	97.62
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.57
PLN03086	567	PRLI-interacting factor K; Provisional	97.46
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.37
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.35
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.31
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.26
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.22
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.16
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.12
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.0
PHA00616	44	hypothetical protein	96.98
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.82
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.78
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.33
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.07
smart00355	26	ZnF_C2H2 zinc finger.	96.04
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.86
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	94.99
smart00355	26	ZnF_C2H2 zinc finger.	94.94
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	94.92
KOG2893	341	consensus Zn finger protein [General function pred	94.64
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	94.61
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	94.02
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.53
COG5048	467	FOG: Zn-finger [General function prediction only]	93.02
KOG1146	1406	consensus Homeobox protein [General function predi	92.91
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	92.68
PRK04860	160	hypothetical protein; Provisional	92.57
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	92.29
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	92.19
KOG4173	253	consensus Alpha-SNAP protein [Intracellular traffi	92.08
KOG1146	1406	consensus Homeobox protein [General function predi	90.85
COG5048	467	FOG: Zn-finger [General function prediction only]	90.08
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	89.1
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	88.45
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	88.41
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	88.26
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	88.17
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	88.16
COG5236	493	Uncharacterized conserved protein, contains RING Z	88.01
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	86.84
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	86.33
COG5236	493	Uncharacterized conserved protein, contains RING Z	84.97
PF06220	38	zf-U1: U1 zinc finger; InterPro: IPR013085 Zinc fi	84.52
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	82.86

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=99.72  E-value=7.2e-17  Score=146.09  Aligned_cols=110  Identities=56%  Similarity=1.047  Sum_probs=93.5

Q ss_pred             CCCCCCCCCCccccCcCCcccCChHHHHHHhcCCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCcccccc
Q 021252            1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI   80 (315)
Q Consensus         1 m~rKk~~~~eK~~C~~CgK~F~~~s~Lk~H~reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~   80 (315)
                      |||||++ ..|.||.||+|.|.++..|.+|++.|.|||.+|.|.+.+--.|..|..++|+|..-+++++..+|+....++
T Consensus         1 mgrkkkk-~~kpwcwycnrefddekiliqhqkakhfkchichkkl~sgpglsihcmqvhketid~ip~av~gr~~i~vei   79 (341)
T KOG2893|consen    1 MGRKKKK-VDKPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLFSGPGLSIHCMQVHKETIDKIPAAVHGRDNIHVEI   79 (341)
T ss_pred             CCccccc-cCCceeeecccccchhhhhhhhhhhccceeeeehhhhccCCCceeehhhhhhhhhhcccccccCCcceeEEE
Confidence            8999998 678999999999999999999999999999999999999999999999999999889999999999999999


Q ss_pred             CCCCCCCHHHHHHHHhhhcCCCCccccccCCCCC
Q 021252           81 YGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFP  114 (315)
Q Consensus        81 Cgk~F~~~s~L~~H~r~h~~e~p~k~~k~~~~~~  114 (315)
                      .|+..+.+...+.-..   ++..+|..+++..+.
T Consensus        80 ygmqgip~~~~r~~~d---e~~~ekr~~~d~~~~  110 (341)
T KOG2893|consen   80 YGMQGIPSGAYRGAAD---EEPDEKRSRMDNGPP  110 (341)
T ss_pred             eeccCCCchhhhhhhh---cCchhhhhcccCCCC
Confidence            9999998866554432   233345555554443

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.66  E-value=7.3e-17  Score=148.93  Aligned_cols=88  Identities=18%  Similarity=0.240  Sum_probs=78.0

Q ss_pred             ccCcCCcccCChHHHHHHhc--CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHH
Q 021252           13 WCYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDV   90 (315)
Q Consensus        13 ~C~~CgK~F~~~s~Lk~H~r--eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~   90 (315)
                      .|.+|||+|..--.|+.|+|  .-+++|.+|||.|.+...|+.|+|+|+||||            |.|..|+|.|.++++
T Consensus       163 ~C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFSRPWLLQGHiRTHTGEKP------------F~C~hC~kAFADRSN  230 (279)
T KOG2462|consen  163 SCKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFSRPWLLQGHIRTHTGEKP------------FSCPHCGKAFADRSN  230 (279)
T ss_pred             cCCCCCceeeehHHHhhHhhccCCCcccccccccccchHHhhcccccccCCCC------------ccCCcccchhcchHH
Confidence            38888888888888888888  6688999999999999999999999999987            777889999999999


Q ss_pred             HHHHHhhhcCCCCccccccCCC
Q 021252           91 LAAHYGEEEEEVPSKMAKVDTS  112 (315)
Q Consensus        91 L~~H~r~h~~e~p~k~~k~~~~  112 (315)
                      |++|+++|.+.+.++|.+..-.
T Consensus       231 LRAHmQTHS~~K~~qC~~C~Ks  252 (279)
T KOG2462|consen  231 LRAHMQTHSDVKKHQCPRCGKS  252 (279)
T ss_pred             HHHHHHhhcCCccccCcchhhH
Confidence            9999999999999999887654

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.55  E-value=1.5e-15  Score=140.30  Aligned_cols=75  Identities=19%  Similarity=0.295  Sum_probs=70.6

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCC
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGI   86 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~   86 (315)
                      ..+|.+|||+|++..-|+.|+|    ||||.|..|+|+|..++||+.|+++|.+.|.            |+|..|+|+|.
T Consensus       187 ~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~------------~qC~~C~KsFs  254 (279)
T KOG2462|consen  187 PCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKK------------HQCPRCGKSFA  254 (279)
T ss_pred             CcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCcc------------ccCcchhhHHH
Confidence            4679999999999999999999    9999999999999999999999999998876            88999999999


Q ss_pred             CHHHHHHHHhh
Q 021252           87 PPDVLAAHYGE   97 (315)
Q Consensus        87 ~~s~L~~H~r~   97 (315)
                      ..+.|.+|.+.
T Consensus       255 l~SyLnKH~ES  265 (279)
T KOG2462|consen  255 LKSYLNKHSES  265 (279)
T ss_pred             HHHHHHHhhhh
Confidence            99999999754

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.32  E-value=3.6e-13  Score=137.14  Aligned_cols=74  Identities=16%  Similarity=0.297  Sum_probs=69.8

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCC
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGI   86 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~   86 (315)
                      -|-|+.|+|+|...+.|.||.-    .|||+|.+|.|+|..+.+|..|+|.|.|||+            |+|+.|+|+|.
T Consensus       894 myaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKP------------fQCdKClKRFS  961 (1007)
T KOG3623|consen  894 MYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKP------------FQCDKCLKRFS  961 (1007)
T ss_pred             cchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCc------------chhhhhhhhcc
Confidence            3459999999999999999976    8999999999999999999999999999998            89999999999


Q ss_pred             CHHHHHHHHh
Q 021252           87 PPDVLAAHYG   96 (315)
Q Consensus        87 ~~s~L~~H~r   96 (315)
                      +...+.+||.
T Consensus       962 HSGSYSQHMN  971 (1007)
T KOG3623|consen  962 HSGSYSQHMN  971 (1007)
T ss_pred             cccchHhhhc
Confidence            9999999985

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.26  E-value=8.7e-13  Score=117.41  Aligned_cols=77  Identities=17%  Similarity=0.264  Sum_probs=61.5

Q ss_pred             CCccccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCC
Q 021252            9 SSKVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQ   84 (315)
Q Consensus         9 ~eK~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~   84 (315)
                      +..+.|++|+|.|.....|.+|++    .|.|.|..|||.|...-+|+||.|+|+|.++|            +|..|+|.
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpy------------kc~~c~ka  182 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPY------------KCSLCEKA  182 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCcccc------------chhhhhHH
Confidence            456779999999999999999999    78899999999999999999999999999884            44555555


Q ss_pred             CCCHHHHHHHHhh
Q 021252           85 GIPPDVLAAHYGE   97 (315)
Q Consensus        85 F~~~s~L~~H~r~   97 (315)
                      |.+...|+.|.+.
T Consensus       183 ftqrcsleshl~k  195 (267)
T KOG3576|consen  183 FTQRCSLESHLKK  195 (267)
T ss_pred             HHhhccHHHHHHH
Confidence            5555555555443

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.13  E-value=9.2e-12  Score=110.94  Aligned_cols=91  Identities=22%  Similarity=0.390  Sum_probs=76.3

Q ss_pred             CCccccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCC--CccccccCC
Q 021252            9 SSKVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGR--ESTDIEIYG   82 (315)
Q Consensus         9 ~eK~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~gr--r~~~C~~Cg   82 (315)
                      .+++.|..|||.|.+..+|++|+|    .|||+|..|+|+|.++..|..|.+.+|+... .  ++..+|  +-|.|+.||
T Consensus       143 vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~-~--yaykerr~kl~vcedcg  219 (267)
T KOG3576|consen  143 VKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQH-Q--YAYKERRAKLYVCEDCG  219 (267)
T ss_pred             HHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchH-H--HHHHHhhhheeeecccC
Confidence            345679999999999999999999    8999999999999999999999999998643 1  111112  238999999


Q ss_pred             CCCCCHHHHHHHHhhhcCCC
Q 021252           83 MQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        83 k~F~~~s~L~~H~r~h~~e~  102 (315)
                      .+....+.+..|.+.|+...
T Consensus       220 ~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  220 YTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             CCCCChhHHHHHHHhcCCCC
Confidence            99999999999999887554

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.05  E-value=2.8e-11  Score=123.55  Aligned_cols=72  Identities=18%  Similarity=0.273  Sum_probs=36.3

Q ss_pred             cccCcCCcccCChHHHHHHhc-----------------CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCC
Q 021252           12 VWCYYCDREFDDEKILVQHQK-----------------AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRE   74 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r-----------------eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr   74 (315)
                      +.|-.|..+|..+..|.+|+.                 .|.|||.+|+|+|..+.+|+.|+|+|.|||+           
T Consensus       241 fsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKP-----------  309 (1007)
T KOG3623|consen  241 FSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKP-----------  309 (1007)
T ss_pred             CcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheeecCCCC-----------
Confidence            335555555555555555543                 3445555555555555555555555555554           


Q ss_pred             ccccccCCCCCCCHHHHHHHH
Q 021252           75 STDIEIYGMQGIPPDVLAAHY   95 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~   95 (315)
                       |+|..|+|+|.+...+..||
T Consensus       310 -feCpnCkKRFSHSGSySSHm  329 (1007)
T KOG3623|consen  310 -FECPNCKKRFSHSGSYSSHM  329 (1007)
T ss_pred             -cCCcccccccccCCcccccc
Confidence             33344445555554444444

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.83  E-value=1.1e-09  Score=113.55  Aligned_cols=78  Identities=23%  Similarity=0.416  Sum_probs=63.0

Q ss_pred             CccccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCC
Q 021252           10 SKVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQG   85 (315)
Q Consensus        10 eK~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F   85 (315)
                      .|.+|.+|.|.|...+.|+.|.|    ||||+|.+||++|.++++|+.|...|+.+.+..--+.+++...++|++|.-.+
T Consensus       352 ~khkCr~CakvfgS~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~rH~e~~p~~~m~p~~~~e~l~~~i~st~~  431 (958)
T KOG1074|consen  352 FKHKCRFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRHREKYPHVQMNPHPVQEHLQYVITSTGL  431 (958)
T ss_pred             ccchhhhhHhhcCchhhhhhhhhccCCCCCeeecccccccccccceeeeeeeccccCCccccCCCCchhhhcceeecccc
Confidence            46679999999999999999999    99999999999999999999999777766654444445555556777776555


Q ss_pred             CC
Q 021252           86 IP   87 (315)
Q Consensus        86 ~~   87 (315)
                      -.
T Consensus       432 p~  433 (958)
T KOG1074|consen  432 PY  433 (958)
T ss_pred             CC
Confidence            43

>PHA00733 hypothetical protein

Probab=98.78  E-value=5e-09  Score=88.20  Aligned_cols=77  Identities=12%  Similarity=0.175  Sum_probs=64.5

Q ss_pred             CccccCcCCcccCChHHHHHH------hc---CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCcccccc
Q 021252           10 SKVWCYYCDREFDDEKILVQH------QK---AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI   80 (315)
Q Consensus        10 eK~~C~~CgK~F~~~s~Lk~H------~r---eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~   80 (315)
                      +++.|.+|.+.|.....|+.|      +.   +++|+|..|++.|.+..+|..|++.+  +..            +.|..
T Consensus        39 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~------------~~C~~  104 (128)
T PHA00733         39 KRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHS------------KVCPV  104 (128)
T ss_pred             hhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcC------------ccCCC
Confidence            345699999999888777665      22   78999999999999999999999754  222            78999


Q ss_pred             CCCCCCCHHHHHHHHhhhcC
Q 021252           81 YGMQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        81 Cgk~F~~~s~L~~H~r~h~~  100 (315)
                      |++.|.+...|.+|++..++
T Consensus       105 CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        105 CGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCccCCHHHHHHHHHHhcC
Confidence            99999999999999987664

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.77  E-value=2e-09  Score=111.70  Aligned_cols=82  Identities=23%  Similarity=0.370  Sum_probs=70.2

Q ss_pred             cccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccc---cCCCC
Q 021252           12 VWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE---IYGMQ   84 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~---~Cgk~   84 (315)
                      -+|-+|.|+.+.++.|+-|+|    ||||||.+|+++|.++++|+.|+.. |+.++       +.|-.+.|.   +|.+.
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~v-Hka~p-------~~R~q~ScP~~~ic~~k  677 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSV-HKAKP-------PARVQFSCPSTFICQKK  677 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccc-cccCc-------cccccccCCchhhhccc
Confidence            359999999999999999999    9999999999999999999999954 44443       123337787   99999


Q ss_pred             CCCHHHHHHHHhhhcCC
Q 021252           85 GIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        85 F~~~s~L~~H~r~h~~e  101 (315)
                      |.+.-.|.+|.++|.+.
T Consensus       678 ftn~V~lpQhIriH~~~  694 (958)
T KOG1074|consen  678 FTNAVTLPQHIRIHLGG  694 (958)
T ss_pred             ccccccccceEEeecCC
Confidence            99999999999999843

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.63  E-value=3.7e-08  Score=94.23  Aligned_cols=91  Identities=21%  Similarity=0.280  Sum_probs=74.2

Q ss_pred             CCccccCcCCcccCChHHHHHHhc-----CCccccccCcccCCCchhhHhHHhhhccCcccccCC--CC-----------
Q 021252            9 SSKVWCYYCDREFDDEKILVQHQK-----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN--AK-----------   70 (315)
Q Consensus         9 ~eK~~C~~CgK~F~~~s~Lk~H~r-----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~--~~-----------   70 (315)
                      ..-|+|..|+.+....+.|.+|+|     +|+|||+.|++.|.+.+.|.+|.. .|.+..|.|..  |.           
T Consensus       261 vn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~-~HS~~~y~C~h~~C~~s~r~~~q~~~  339 (467)
T KOG3608|consen  261 VNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQ-VHSKTVYQCEHPDCHYSVRTYTQMRR  339 (467)
T ss_pred             hhcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHH-hccccceecCCCCCcHHHHHHHHHHH
Confidence            345678889999999999999988     899999999999999999999986 55577788875  51           


Q ss_pred             ------C--CCCccccccCCCCCCCHHHHHHHHhhhcC
Q 021252           71 ------P--GRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        71 ------~--grr~~~C~~Cgk~F~~~s~L~~H~r~h~~  100 (315)
                            +  ..-.|.|..|.+.|....+|.+|++..++
T Consensus       340 H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~  377 (467)
T KOG3608|consen  340 HFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHG  377 (467)
T ss_pred             HHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhc
Confidence                  1  12239999999999999999999876544

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.55  E-value=3.4e-08  Score=94.43  Aligned_cols=75  Identities=23%  Similarity=0.407  Sum_probs=36.4

Q ss_pred             cCcCCcccCChHHHHHHhc--CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHH
Q 021252           14 CYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVL   91 (315)
Q Consensus        14 C~~CgK~F~~~s~Lk~H~r--eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L   91 (315)
                      |..|.|.|..+..|+.|++  ...|+|..|+-+....+.|.+|+|..|.           ..++++|+.|.+.|.+.++|
T Consensus       240 C~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~~ssL~~H~r~rHs-----------~dkpfKCd~Cd~~c~~esdL  308 (467)
T KOG3608|consen  240 CAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSSASSLTTHIRYRHS-----------KDKPFKCDECDTRCVRESDL  308 (467)
T ss_pred             HHHHHHHHhHHHHHHHHHHHhhhcccccccccCCCChHHHHHHHHhhhc-----------cCCCccccchhhhhccHHHH
Confidence            4444444444444444443  3444444444444444444444444332           12335555666666666666


Q ss_pred             HHHHhhhc
Q 021252           92 AAHYGEEE   99 (315)
Q Consensus        92 ~~H~r~h~   99 (315)
                      .+|...|.
T Consensus       309 ~kH~~~HS  316 (467)
T KOG3608|consen  309 AKHVQVHS  316 (467)
T ss_pred             HHHHHhcc
Confidence            66555554

>PHA02768 hypothetical protein; Provisional

Probab=98.52  E-value=4.5e-08  Score=70.34  Aligned_cols=41  Identities=17%  Similarity=0.361  Sum_probs=27.6

Q ss_pred             cccCcCCcccCChHHHHHHhc--CCccccccCcccCCCchhhH
Q 021252           12 VWCYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMA   52 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r--eKPfkC~~CgktF~~~~~L~   52 (315)
                      |.|++|||.|.+.++|..|+|  .++|+|..|++.|.+.+.|.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHNTNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcCCcccCCcccceecccceeE
Confidence            457777777777777777766  55677777777766666553

>PHA00733 hypothetical protein

Probab=98.41  E-value=2.6e-07  Score=77.80  Aligned_cols=51  Identities=25%  Similarity=0.388  Sum_probs=47.4

Q ss_pred             ccccCcCCcccCChHHHHHHhc--CCccccccCcccCCCchhhHhHHhhhccC
Q 021252           11 KVWCYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r--eKPfkC~~CgktF~~~~~L~rH~r~hh~e   61 (315)
                      .|.|.+|++.|....+|++|++  +++|+|.+|++.|.....|.+|++..|+.
T Consensus        73 Py~C~~Cgk~Fss~s~L~~H~r~h~~~~~C~~CgK~F~~~~sL~~H~~~~h~~  125 (128)
T PHA00733         73 PYVCPLCLMPFSSSVSLKQHIRYTEHSKVCPVCGKEFRNTDSTLDHVCKKHNI  125 (128)
T ss_pred             CccCCCCCCcCCCHHHHHHHHhcCCcCccCCCCCCccCCHHHHHHHHHHhcCc
Confidence            4569999999999999999999  78999999999999999999999888864

>PHA02768 hypothetical protein; Provisional

Probab=98.40  E-value=9.4e-08  Score=68.70  Aligned_cols=44  Identities=9%  Similarity=0.200  Sum_probs=37.6

Q ss_pred             ccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHH
Q 021252           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLA   92 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~   92 (315)
                      -|+|++||+.|.+.++|.+|+|+|+  ++            ++|..|++.|.+.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~------------~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TN------------LKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--Cc------------ccCCcccceecccceeE
Confidence            4899999999999999999999987  33            67788999998776653

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.29  E-value=1.2e-06  Score=89.79  Aligned_cols=82  Identities=16%  Similarity=0.220  Sum_probs=59.9

Q ss_pred             cccCcCCcccCChHHHHHHhc--CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCC--
Q 021252           12 VWCYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIP--   87 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r--eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~--   87 (315)
                      +.|.+|++.|. ...|+.|++  .+++.|. |++.+ .+..|..|+++|..+++            +.|..|++.+..  
T Consensus       454 ~~C~~Cgk~f~-~s~LekH~~~~Hkpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kp------------i~C~fC~~~v~~g~  518 (567)
T PLN03086        454 VHCEKCGQAFQ-QGEMEKHMKVFHEPLQCP-CGVVL-EKEQMVQHQASTCPLRL------------ITCRFCGDMVQAGG  518 (567)
T ss_pred             ccCCCCCCccc-hHHHHHHHHhcCCCccCC-CCCCc-chhHHHhhhhccCCCCc------------eeCCCCCCccccCc
Confidence            35999999996 678999988  7889999 99755 66899999887777776            556666666631  


Q ss_pred             --------HHHHHHHHhhhcCCCCcccccc
Q 021252           88 --------PDVLAAHYGEEEEEVPSKMAKV  109 (315)
Q Consensus        88 --------~s~L~~H~r~h~~e~p~k~~k~  109 (315)
                              .+.|..|+..+ +.+...|..+
T Consensus       519 ~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~C  547 (567)
T PLN03086        519 SAMDVRDRLRGMSEHESIC-GSRTAPCDSC  547 (567)
T ss_pred             cccchhhhhhhHHHHHHhc-CCcceEcccc
Confidence                    24667776664 5566666444

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.23  E-value=3.5e-07  Score=89.34  Aligned_cols=93  Identities=22%  Similarity=0.321  Sum_probs=71.1

Q ss_pred             cccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCccccc----CC-------------CC
Q 021252           12 VWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV----PN-------------AK   70 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~c----p~-------------~~   70 (315)
                      |.|+.|.-.|.+...|.+|.-    ..-|+|.+|+|.|+-..||..|+| +|+-++..-    +.             ..
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRR-WHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRR-WHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhc-ccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            569999999999999999976    456999999999999999999975 554332111    10             00


Q ss_pred             -----CCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcc
Q 021252           71 -----PGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (315)
Q Consensus        71 -----~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k  105 (315)
                           ....-|.|.+|+|.|.+...|++|+-+|+.....+
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k  386 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAK  386 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccch
Confidence                 01113899999999999999999998887654433

>PHA00732 hypothetical protein

Probab=97.96  E-value=4.4e-06  Score=64.65  Aligned_cols=44  Identities=25%  Similarity=0.354  Sum_probs=33.5

Q ss_pred             cccCcCCcccCChHHHHHHhc--CCccccccCcccCCCchhhHhHHhhh
Q 021252           12 VWCYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQV   58 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r--eKPfkC~~CgktF~~~~~L~rH~r~h   58 (315)
                      |.|++|++.|.+..+|++|++  ..++.|.+|+++|.   .|..|.++.
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~~~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHTLTKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccCCCccCCCCCEeC---Chhhhhccc
Confidence            458888888888888888876  56688888888887   477777443

>PHA00732 hypothetical protein

Probab=97.92  E-value=7.1e-06  Score=63.52  Aligned_cols=49  Identities=20%  Similarity=0.267  Sum_probs=40.9

Q ss_pred             ccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcC
Q 021252           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~  100 (315)
                      +|+|..|++.|.+..+|++|++.+|..              +.|+.|++.|.+   |.+|.+++.+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~--------------~~C~~CgKsF~~---l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL--------------TKCPVCNKSYRR---LNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC--------------CccCCCCCEeCC---hhhhhcccCC
Confidence            589999999999999999999755432              468999999994   7889887655

>PHA00616 hypothetical protein

Probab=97.91  E-value=3.5e-06  Score=57.87  Aligned_cols=33  Identities=24%  Similarity=0.465  Sum_probs=29.0

Q ss_pred             ccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +|+|..||+.|..+.+|.+|++.||+++++.|.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            689999999999999999999999999875543

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.62  E-value=1.6e-05  Score=78.00  Aligned_cols=53  Identities=26%  Similarity=0.526  Sum_probs=46.2

Q ss_pred             CCccccCcCCcccCChHHHHHHhc----------------CC---------------------ccccccCcccCCCchhh
Q 021252            9 SSKVWCYYCDREFDDEKILVQHQK----------------AK---------------------HFKCHVCHKKLSTAGGM   51 (315)
Q Consensus         9 ~eK~~C~~CgK~F~~~s~Lk~H~r----------------eK---------------------PfkC~~CgktF~~~~~L   51 (315)
                      ...|+|.+|+|.|+...+|..|+|                ++                     -|.|.+|+|+|.+..-|
T Consensus       293 ~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYL  372 (500)
T KOG3993|consen  293 HVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYL  372 (500)
T ss_pred             EeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHH
Confidence            346889999999999999999988                11                     27899999999999999


Q ss_pred             HhHHhhhccC
Q 021252           52 AIHVLQVHKE   61 (315)
Q Consensus        52 ~rH~r~hh~e   61 (315)
                      ++|+.+|+..
T Consensus       373 rKHqlthq~~  382 (500)
T KOG3993|consen  373 RKHQLTHQRA  382 (500)
T ss_pred             HHhHHhhhcc
Confidence            9999888854

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.57  E-value=8.4e-05  Score=53.12  Aligned_cols=46  Identities=28%  Similarity=0.682  Sum_probs=28.3

Q ss_pred             ccccCcCCcccCChHHHHHHhc------CCccccccCcccCCCchhhHhHHhhhc
Q 021252           11 KVWCYYCDREFDDEKILVQHQK------AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r------eKPfkC~~CgktF~~~~~L~rH~r~hh   59 (315)
                      .|.|.+|++.| +...|..|..      .+.+.|.+|.+.+.  .+|.+|++.+|
T Consensus         2 ~f~CP~C~~~~-~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGKGF-SESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCCcc-CHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            45677777743 3456777655      34567777776544  37777776655

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.46  E-value=0.00013  Score=74.94  Aligned_cols=64  Identities=14%  Similarity=0.194  Sum_probs=51.7

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccccccCCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTS  112 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~k~~~~  112 (315)
                      ++++.|..|++.|. ...|.+|++.+|  ++            +.|. ||+.+ ....|.+|+++|..+++.+|.-+...
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H--kp------------v~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~  513 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH--EP------------LQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDM  513 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC--CC------------ccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCc
Confidence            46789999999996 688999998876  33            6777 88654 66899999999999999998876554


Q ss_pred             C
Q 021252          113 F  113 (315)
Q Consensus       113 ~  113 (315)
                      .
T Consensus       514 v  514 (567)
T PLN03086        514 V  514 (567)
T ss_pred             c
Confidence            3

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.37  E-value=7.4e-05  Score=45.59  Aligned_cols=14  Identities=14%  Similarity=0.116  Sum_probs=8.4

Q ss_pred             hhHhHHhhhccCcc
Q 021252           50 GMAIHVLQVHKENV   63 (315)
Q Consensus        50 ~L~rH~r~hh~ekp   63 (315)
                      +|.+|+++|.++++
T Consensus         1 ~l~~H~~~H~~~k~   14 (26)
T PF13465_consen    1 NLRRHMRTHTGEKP   14 (26)
T ss_dssp             HHHHHHHHHSSSSS
T ss_pred             CHHHHhhhcCCCCC
Confidence            35666666666655

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.35  E-value=8.9e-05  Score=45.23  Aligned_cols=22  Identities=36%  Similarity=0.700  Sum_probs=18.2

Q ss_pred             HHHHHhc----CCccccccCcccCCC
Q 021252           26 ILVQHQK----AKHFKCHVCHKKLST   47 (315)
Q Consensus        26 ~Lk~H~r----eKPfkC~~CgktF~~   47 (315)
                      +|++|++    ||+|+|.+|+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            4666766    999999999999974

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.31  E-value=0.00012  Score=57.06  Aligned_cols=24  Identities=8%  Similarity=-0.014  Sum_probs=20.8

Q ss_pred             cccccCCCCCCCHHHHHHHHhhhc
Q 021252           76 TDIEIYGMQGIPPDVLAAHYGEEE   99 (315)
Q Consensus        76 ~~C~~Cgk~F~~~s~L~~H~r~h~   99 (315)
                      +.|.+|++.|.....|..|++.+.
T Consensus        51 ~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen   51 FRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             EEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             CCCCccCCCCcCHHHHHHHHcCcc
Confidence            889999999999999999998753

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.26  E-value=0.00011  Score=43.08  Aligned_cols=22  Identities=27%  Similarity=0.730  Sum_probs=13.2

Q ss_pred             cccccCcccCCCchhhHhHHhh
Q 021252           36 FKCHVCHKKLSTAGGMAIHVLQ   57 (315)
Q Consensus        36 fkC~~CgktF~~~~~L~rH~r~   57 (315)
                      |+|.+|++.|.++..|++|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4566666666666666666554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.22  E-value=9.3e-05  Score=70.42  Aligned_cols=65  Identities=23%  Similarity=0.331  Sum_probs=48.0

Q ss_pred             CCcccccc--CcccCCCchhhHhHHhhhccC-----cccccC--CCCCCCCccccccCCCCCCCHHHHHHHHhh
Q 021252           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKE-----NVTKVP--NAKPGRESTDIEIYGMQGIPPDVLAAHYGE   97 (315)
Q Consensus        33 eKPfkC~~--CgktF~~~~~L~rH~r~hh~e-----kp~~cp--~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~   97 (315)
                      +|+|+|.+  |.|++.....|+-|++.-|..     .+..-+  .-....+.|+|++|+|++..-.-|+-|++-
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~H  420 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRKH  420 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecccc
Confidence            79999998  999999999999998644421     110000  012245569999999999999999988764

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.16  E-value=0.00018  Score=41.74  Aligned_cols=24  Identities=25%  Similarity=0.661  Sum_probs=15.3

Q ss_pred             cccccCcccCCCchhhHhHHhhhc
Q 021252           36 FKCHVCHKKLSTAGGMAIHVLQVH   59 (315)
Q Consensus        36 fkC~~CgktF~~~~~L~rH~r~hh   59 (315)
                      |+|.+|++.|.++..|++|++++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            567777777777777777776654

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.12  E-value=0.00066  Score=48.47  Aligned_cols=52  Identities=19%  Similarity=0.305  Sum_probs=40.2

Q ss_pred             ccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhc
Q 021252           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE   99 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~   99 (315)
                      -|.|.+|++ ..+...|.+|....|....          +.+.|.+|...+.  .+|.+|++.++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~----------~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSES----------KNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCC----------CCccCCCchhhhh--hHHHHHHHHhc
Confidence            489999999 5567899999988886542          2378888987644  48999998765

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.00  E-value=0.00025  Score=67.54  Aligned_cols=46  Identities=24%  Similarity=0.608  Sum_probs=41.1

Q ss_pred             CccccCc--CCcccCChHHHHHHhc-----------------------CCccccccCcccCCCchhhHhHH
Q 021252           10 SKVWCYY--CDREFDDEKILVQHQK-----------------------AKHFKCHVCHKKLSTAGGMAIHV   55 (315)
Q Consensus        10 eK~~C~~--CgK~F~~~s~Lk~H~r-----------------------eKPfkC~~CgktF~~~~~L~rH~   55 (315)
                      +-|+|.+  |+|+++....|+-|+.                       .|||+|++|+|+++....|+-|+
T Consensus       348 KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         348 KPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             ceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            3456987  9999999999998876                       59999999999999999999996

>PHA00616 hypothetical protein

Probab=96.98  E-value=0.00037  Score=47.95  Aligned_cols=31  Identities=6%  Similarity=-0.154  Sum_probs=28.5

Q ss_pred             cccccCCCCCCCHHHHHHHHhhhcCCCCccc
Q 021252           76 TDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (315)
Q Consensus        76 ~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~  106 (315)
                      |+|..||+.|.+.++|.+|++.|+++++..+
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcCCCccce
Confidence            7899999999999999999999999987654

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.82  E-value=0.00062  Score=39.74  Aligned_cols=21  Identities=24%  Similarity=0.566  Sum_probs=19.4

Q ss_pred             cccCcCCcccCChHHHHHHhc
Q 021252           12 VWCYYCDREFDDEKILVQHQK   32 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r   32 (315)
                      |.|.+|++.|.+...|++|++
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~   21 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMR   21 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHh
Confidence            569999999999999999985

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.78  E-value=0.00045  Score=41.95  Aligned_cols=25  Identities=24%  Similarity=0.460  Sum_probs=17.1

Q ss_pred             ccccccCcccCCCchhhHhHHhhhc
Q 021252           35 HFKCHVCHKKLSTAGGMAIHVLQVH   59 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~r~hh   59 (315)
                      +|+|.+|++.|.+...|.+|++.|+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4667777777777777777776554

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.33  E-value=0.0016  Score=46.10  Aligned_cols=31  Identities=13%  Similarity=0.288  Sum_probs=23.4

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp   63 (315)
                      +.|..|.+|+..+.+..+|+||+..+|+.|+
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            8899999999999999999999999998875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.07  E-value=0.0037  Score=36.02  Aligned_cols=24  Identities=17%  Similarity=0.079  Sum_probs=19.9

Q ss_pred             cccccCCCCCCCHHHHHHHHhhhc
Q 021252           76 TDIEIYGMQGIPPDVLAAHYGEEE   99 (315)
Q Consensus        76 ~~C~~Cgk~F~~~s~L~~H~r~h~   99 (315)
                      |.|.+|++.|.....|++|+++|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            579999999999999999998864

...

>smart00355 ZnF_C2H2 zinc finger

Probab=96.04  E-value=0.0046  Score=35.99  Aligned_cols=22  Identities=18%  Similarity=0.563  Sum_probs=14.7

Q ss_pred             cccccCcccCCCchhhHhHHhh
Q 021252           36 FKCHVCHKKLSTAGGMAIHVLQ   57 (315)
Q Consensus        36 fkC~~CgktF~~~~~L~rH~r~   57 (315)
                      |+|..|++.|.....|.+|++.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~   22 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRT   22 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHH
Confidence            4566777777777777777653

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.86  E-value=0.0045  Score=37.77  Aligned_cols=22  Identities=41%  Similarity=0.789  Sum_probs=16.1

Q ss_pred             ccccCcCCcccCChHHHHHHhc
Q 021252           11 KVWCYYCDREFDDEKILVQHQK   32 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r   32 (315)
                      +|+|..|+|.|.....|++|++
T Consensus         1 q~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    1 QFYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             -CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCCcccCCCCcCCHHHHHHHHc
Confidence            3667788888888877777765

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=94.99  E-value=0.011  Score=35.64  Aligned_cols=25  Identities=12%  Similarity=0.001  Sum_probs=22.8

Q ss_pred             cccccCCCCCCCHHHHHHHHhhhcC
Q 021252           76 TDIEIYGMQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        76 ~~C~~Cgk~F~~~s~L~~H~r~h~~  100 (315)
                      +.|..|++.|.....|.+|++.|..
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCccCCccCChhHHHHHhHHhcC
Confidence            7899999999999999999988753

>smart00355 ZnF_C2H2 zinc finger

Probab=94.94  E-value=0.025  Score=32.70  Aligned_cols=24  Identities=13%  Similarity=-0.011  Sum_probs=21.5

Q ss_pred             cccccCCCCCCCHHHHHHHHhhhc
Q 021252           76 TDIEIYGMQGIPPDVLAAHYGEEE   99 (315)
Q Consensus        76 ~~C~~Cgk~F~~~s~L~~H~r~h~   99 (315)
                      ++|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            468999999999999999999765

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=94.92  E-value=0.016  Score=34.30  Aligned_cols=20  Identities=35%  Similarity=0.851  Sum_probs=11.3

Q ss_pred             ccCcCCcccCChHHHHHHhc
Q 021252           13 WCYYCDREFDDEKILVQHQK   32 (315)
Q Consensus        13 ~C~~CgK~F~~~s~Lk~H~r   32 (315)
                      +|+.|++.|.....|+.|++
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            45555555555555555544

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=94.64  E-value=0.36  Score=44.81  Aligned_cols=45  Identities=16%  Similarity=0.232  Sum_probs=31.2

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHH
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAH   94 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H   94 (315)
                      .|+| |=+|++.|-...-|..|++.    |.            |+|.+|.|.....--|..|
T Consensus         9 ~kpw-cwycnrefddekiliqhqka----kh------------fkchichkkl~sgpglsih   53 (341)
T KOG2893|consen    9 DKPW-CWYCNREFDDEKILIQHQKA----KH------------FKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             CCce-eeecccccchhhhhhhhhhh----cc------------ceeeeehhhhccCCCceee
Confidence            5665 88999999999999988753    33            6677777665444444433

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=94.61  E-value=0.017  Score=33.98  Aligned_cols=24  Identities=25%  Similarity=0.527  Sum_probs=14.9

Q ss_pred             cccccCcccCCCchhhHhHHhhhcc
Q 021252           36 FKCHVCHKKLSTAGGMAIHVLQVHK   60 (315)
Q Consensus        36 fkC~~CgktF~~~~~L~rH~r~hh~   60 (315)
                      |+|..|..... +..|.+|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            56777776666 6677777776653

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=94.02  E-value=0.021  Score=33.76  Aligned_cols=21  Identities=29%  Similarity=0.767  Sum_probs=12.9

Q ss_pred             cccccCcccCCCchhhHhHHh
Q 021252           36 FKCHVCHKKLSTAGGMAIHVL   56 (315)
Q Consensus        36 fkC~~CgktF~~~~~L~rH~r   56 (315)
                      |.|.+|++.|.+...|+.|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            456666666666666666654

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.53  E-value=0.059  Score=34.31  Aligned_cols=22  Identities=32%  Similarity=0.649  Sum_probs=15.6

Q ss_pred             ccccCcCCcccCChHHHHHHhc
Q 021252           11 KVWCYYCDREFDDEKILVQHQK   32 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r   32 (315)
                      +++|++|++.|.....++.|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4567777777777777777765

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.02  E-value=0.039  Score=52.66  Aligned_cols=57  Identities=23%  Similarity=0.400  Sum_probs=49.1

Q ss_pred             ccccCcCCcccCChHHHHHHhc------C--Cccccc--cCcccCCCchhhHhHHhhhccCcccccC
Q 021252           11 KVWCYYCDREFDDEKILVQHQK------A--KHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r------e--KPfkC~--~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      .+.|..|.+.|.+...|.+|.+      +  +++.|.  .|++.|.+.+.+.+|.++|.+.+..++.
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEK  355 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccc
Confidence            3569999999999999998877      6  999999  7999999999999999988876655543

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=92.91  E-value=0.041  Score=61.08  Aligned_cols=84  Identities=13%  Similarity=0.171  Sum_probs=63.0

Q ss_pred             cCcCCcccCChHHHHHHhc-----CCccccccCcccCCCchhhHhHHhhhccCcc-cccC----CCC--------CCCCc
Q 021252           14 CYYCDREFDDEKILVQHQK-----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV-TKVP----NAK--------PGRES   75 (315)
Q Consensus        14 C~~CgK~F~~~s~Lk~H~r-----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp-~~cp----~~~--------~grr~   75 (315)
                      |.-|+..+.++..+..|+.     .|-|+|.+|+..|.....|..|+|..|-+-. ..|.    .+.        -++..
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p  518 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP  518 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc
Confidence            5556777777777777766     7889999999999999999999998664321 1111    111        12345


Q ss_pred             cccccCCCCCCCHHHHHHHHhh
Q 021252           76 TDIEIYGMQGIPPDVLAAHYGE   97 (315)
Q Consensus        76 ~~C~~Cgk~F~~~s~L~~H~r~   97 (315)
                      |.|+.|...+....+|.+|++.
T Consensus       519 ~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  519 YPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ccceeeeeeeecchHHHHHHHH
Confidence            8999999999999999999876

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=92.68  E-value=0.047  Score=33.15  Aligned_cols=22  Identities=27%  Similarity=0.625  Sum_probs=16.6

Q ss_pred             cccccCcccCCCchhhHhHHhh
Q 021252           36 FKCHVCHKKLSTAGGMAIHVLQ   57 (315)
Q Consensus        36 fkC~~CgktF~~~~~L~rH~r~   57 (315)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6678888888888888777654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=92.57  E-value=0.054  Score=47.40  Aligned_cols=38  Identities=18%  Similarity=0.225  Sum_probs=25.8

Q ss_pred             CccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCC
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIP   87 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~   87 (315)
                      -+|+|. |++   ....+++|.+.|.+++.            |.|..|++.|..
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~------------YrC~~C~~~l~~  155 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAV------------YRCRRCGETLVF  155 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCcc------------EECCCCCceeEE
Confidence            357786 776   66777888877777765            566666665543

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=92.29  E-value=0.15  Score=53.74  Aligned_cols=23  Identities=30%  Similarity=0.602  Sum_probs=14.2

Q ss_pred             cccCChHHHHHHhc--CCccccccC
Q 021252           19 REFDDEKILVQHQK--AKHFKCHVC   41 (315)
Q Consensus        19 K~F~~~s~Lk~H~r--eKPfkC~~C   41 (315)
                      -.|....+|++|++  -+-+.|.+|
T Consensus       122 ~~~~s~~~Lk~H~~~~H~~~~c~lC  146 (669)
T KOG2231|consen  122 TEFKSVENLKNHMRDQHKLHLCSLC  146 (669)
T ss_pred             cchhHHHHHHHHHHHhhhhhccccc
Confidence            33447788899987  344555554

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=92.19  E-value=0.15  Score=53.69  Aligned_cols=48  Identities=25%  Similarity=0.536  Sum_probs=34.5

Q ss_pred             cccCcCCcccCChHHHHHHhcCCccccccCc------ccCCCchhhHhHHhhhc
Q 021252           12 VWCYYCDREFDDEKILVQHQKAKHFKCHVCH------KKLSTAGGMAIHVLQVH   59 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~reKPfkC~~Cg------ktF~~~~~L~rH~r~hh   59 (315)
                      ..|.+|...|-....|.+|++...|.|.+|.      .-|..-+.|..|.|..|
T Consensus       183 p~C~~C~~~fld~~el~rH~~~~h~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  183 PLCKFCHERFLDDDELYRHLRFDHEFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             ccchhhhhhhccHHHHHHhhccceeheeecCcccccchhcccchHHHHHhhhcC
Confidence            4588888888888888888886677777773      33556677777777655

>KOG4173 consensus Alpha-SNAP protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=92.08  E-value=0.058  Score=48.87  Aligned_cols=84  Identities=17%  Similarity=0.205  Sum_probs=61.9

Q ss_pred             cccCc--CCcccCChHHHHHHhc-CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCcccc--ccCCCCCC
Q 021252           12 VWCYY--CDREFDDEKILVQHQK-AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDI--EIYGMQGI   86 (315)
Q Consensus        12 ~~C~~--CgK~F~~~s~Lk~H~r-eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C--~~Cgk~F~   86 (315)
                      +.|++  |-+.|+...++..|.. ..--.|.+|.+.|-+...|..|+...|..- |... ...|.+-|+|  +.|+..|.
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h~~sCs~C~r~~Pt~hLLd~HI~E~HDs~-Fqa~-veRG~dMy~ClvEgCt~KFk  157 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLHGNSCSFCKRAFPTGHLLDAHILEWHDSL-FQAL-VERGQDMYQCLVEGCTEKFK  157 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhcccchhHHHHHhCCchhhhhHHHHHHHHHH-HHHH-HHcCccHHHHHHHhhhhhhh
Confidence            45887  8888988888888877 444589999999999999999997777421 0000 0112344777  78999999


Q ss_pred             CHHHHHHHHhh
Q 021252           87 PPDVLAAHYGE   97 (315)
Q Consensus        87 ~~s~L~~H~r~   97 (315)
                      ...+.+.|+-.
T Consensus       158 T~r~RkdH~I~  168 (253)
T KOG4173|consen  158 TSRDRKDHMIR  168 (253)
T ss_pred             hhhhhhhHHHH
Confidence            99898999744

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=90.85  E-value=0.12  Score=57.65  Aligned_cols=88  Identities=10%  Similarity=0.083  Sum_probs=66.2

Q ss_pred             cccCcCCcccCChHHHHHHhc-CCccccccCcccCCCchhhHhHHhhhcc-Ccc--ccc--CCCCCCCCccccccCCCCC
Q 021252           12 VWCYYCDREFDDEKILVQHQK-AKHFKCHVCHKKLSTAGGMAIHVLQVHK-ENV--TKV--PNAKPGRESTDIEIYGMQG   85 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r-eKPfkC~~CgktF~~~~~L~rH~r~hh~-ekp--~~c--p~~~~grr~~~C~~Cgk~F   85 (315)
                      +.|..|++.|.-...+. |+- +++|+|.+|...|.....|..|.+.... .+.  ..-  +...+.++.| |.+|...|
T Consensus      1261 ~~c~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~l~~~~~k~~~~~~~~~~~~~~~l~~~d~~~~-c~~c~~~~ 1338 (1406)
T KOG1146|consen 1261 GECGAVDELLTPSFGIS-TLDVTHRYLCRQCKMAFDGEAPLTAHQRKFCFAGRGSGGSMPPPLRVPDCTYH-CLACEVLL 1338 (1406)
T ss_pred             chhhhccccccCcccee-ecccchhHHHHHHHhhhcchhHHHHHHHHHHhccCccccCCCCcccCcccccc-chHHHhhc
Confidence            55999999999988888 887 9999999999999999999999843210 000  000  0112334447 99999999


Q ss_pred             CCHHHHHHHHhhhcCC
Q 021252           86 IPPDVLAAHYGEEEEE  101 (315)
Q Consensus        86 ~~~s~L~~H~r~h~~e  101 (315)
                      .....|..|||+.+.+
T Consensus      1339 ~~~~alqihm~~~~~~ 1354 (1406)
T KOG1146|consen 1339 SGREALQIHMRSSAHR 1354 (1406)
T ss_pred             chhHHHHHHHHHhhhc
Confidence            9999999999985543

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=90.08  E-value=0.098  Score=49.87  Aligned_cols=67  Identities=18%  Similarity=0.166  Sum_probs=54.2

Q ss_pred             CccccccCcccCCCchhhHhHHh--hhccC--cccccCCCCCCCCccccc--cCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHVL--QVHKE--NVTKVPNAKPGRESTDIE--IYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~r--~hh~e--kp~~cp~~~~grr~~~C~--~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      ..+.|..|...|.+...|.+|.+  .|.++  ++            +.|.  .|++.|.+...+++|...|.+....++.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~------------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKP------------FSCPYSLCGKLFSRNDALKRHILLHTSISPAKEK  355 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCc------------eeeeccCCCccccccccccCCcccccCCCccccc
Confidence            47999999999999999999999  67777  55            4454  7999999999999999999877655554


Q ss_pred             ccCCC
Q 021252          108 KVDTS  112 (315)
Q Consensus       108 k~~~~  112 (315)
                      -....
T Consensus       356 ~~~~~  360 (467)
T COG5048         356 LLNSS  360 (467)
T ss_pred             cccCc
Confidence            44333

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=89.10  E-value=0.27  Score=28.76  Aligned_cols=23  Identities=9%  Similarity=-0.018  Sum_probs=18.0

Q ss_pred             cccccCCCCCCCHHHHHHHHhhhc
Q 021252           76 TDIEIYGMQGIPPDVLAAHYGEEE   99 (315)
Q Consensus        76 ~~C~~Cgk~F~~~s~L~~H~r~h~   99 (315)
                      |+|..|..... ...|++|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            57889998887 889999999875

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=88.45  E-value=0.29  Score=37.75  Aligned_cols=47  Identities=30%  Similarity=0.695  Sum_probs=22.2

Q ss_pred             ccCcCCcccCChHHHHHHhc---------------------------CCccccccCcccCCCchhhHhHHhhhc
Q 021252           13 WCYYCDREFDDEKILVQHQK---------------------------AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (315)
Q Consensus        13 ~C~~CgK~F~~~s~Lk~H~r---------------------------eKPfkC~~CgktF~~~~~L~rH~r~hh   59 (315)
                      +|.+|+..|.....|..|++                           ...+.|.+|++.|.....|..|++.++
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             ------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            48899999999988888875                           235899999999999999999998763

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=88.41  E-value=0.31  Score=39.94  Aligned_cols=35  Identities=20%  Similarity=0.461  Sum_probs=28.0

Q ss_pred             CCCCccccCcCCcccCChHHHHHHhcCCccccccCcccCCCc
Q 021252            7 RVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTA   48 (315)
Q Consensus         7 ~~~eK~~C~~CgK~F~~~s~Lk~H~reKPfkC~~CgktF~~~   48 (315)
                      ..|.|..|..||+.|-...       ..|-.|.+||..|.-.
T Consensus         5 elGtKR~Cp~CG~kFYDLn-------k~PivCP~CG~~~~~~   39 (108)
T PF09538_consen    5 ELGTKRTCPSCGAKFYDLN-------KDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCcccCCCCcchhccCC-------CCCccCCCCCCccCcc
Confidence            3466778999999995433       5788999999999876

The function of members of this family is unknown.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=88.26  E-value=0.3  Score=29.41  Aligned_cols=18  Identities=22%  Similarity=0.659  Sum_probs=8.3

Q ss_pred             ccccCcccCCCchhhHhHH
Q 021252           37 KCHVCHKKLSTAGGMAIHV   55 (315)
Q Consensus        37 kC~~CgktF~~~~~L~rH~   55 (315)
                      .|..|+++| ..+.|.+|+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~   21 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHE   21 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHH
Confidence            344455554 334444443

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=88.17  E-value=0.41  Score=28.82  Aligned_cols=20  Identities=40%  Similarity=0.748  Sum_probs=16.6

Q ss_pred             cccCcCCcccCChHHHHHHhc
Q 021252           12 VWCYYCDREFDDEKILVQHQK   32 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r   32 (315)
                      ..|..|||.| ....|.+|++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            3599999999 6777899974

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=88.16  E-value=0.53  Score=33.50  Aligned_cols=29  Identities=17%  Similarity=0.087  Sum_probs=21.5

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCCCC
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEEVP  103 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p  103 (315)
                      .-.|.+|+..+.+..+|++|++.+++.++
T Consensus        24 PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   24 PATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             -EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            36789999999999999999999887654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=88.01  E-value=0.63  Score=45.39  Aligned_cols=77  Identities=19%  Similarity=0.333  Sum_probs=49.2

Q ss_pred             cccCcCCcccCChHHHHHHhcCCccccccCcc-------cCCCchhhHhHHhhhccCcccccC--CCCCCCCccccccCC
Q 021252           12 VWCYYCDREFDDEKILVQHQKAKHFKCHVCHK-------KLSTAGGMAIHVLQVHKENVTKVP--NAKPGRESTDIEIYG   82 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~reKPfkC~~Cgk-------tF~~~~~L~rH~r~hh~ekp~~cp--~~~~grr~~~C~~Cg   82 (315)
                      +.|.+|.+.|-+...|.+|.|++.-+|.+|++       -|..-..|.+|.+.-|    |.|-  .|..+       .| 
T Consensus       221 P~C~FC~~~FYdDDEL~~HcR~~HE~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h----y~ct~qtc~~~-------k~-  288 (493)
T COG5236         221 PLCIFCKIYFYDDDELRRHCRLRHEACHICDMVGPIRYQYFKSYEDLEAHFRNAH----YCCTFQTCRVG-------KC-  288 (493)
T ss_pred             chhhhccceecChHHHHHHHHhhhhhhhhhhccCccchhhhhCHHHHHHHhhcCc----eEEEEEEEecC-------cE-
Confidence            35999999999999999999955555555543       3777788888875333    2221  11111       11 


Q ss_pred             CCCCCHHHHHHHHhhhcC
Q 021252           83 MQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        83 k~F~~~s~L~~H~r~h~~  100 (315)
                      ..|...-.|..|....++
T Consensus       289 ~vf~~~~el~~h~~~~h~  306 (493)
T COG5236         289 YVFPYHTELLEHLTRFHK  306 (493)
T ss_pred             EEeccHHHHHHHHHHHhh
Confidence            347777788888755443

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=86.84  E-value=0.32  Score=47.28  Aligned_cols=23  Identities=30%  Similarity=0.885  Sum_probs=20.4

Q ss_pred             CccccCcCCcccCChHHHHHHhc
Q 021252           10 SKVWCYYCDREFDDEKILVQHQK   32 (315)
Q Consensus        10 eK~~C~~CgK~F~~~s~Lk~H~r   32 (315)
                      ++..|-+|.|.|..+..|+.|||
T Consensus       194 ~r~~CLyCekifrdkntLkeHMr  216 (423)
T KOG2482|consen  194 ERLRCLYCEKIFRDKNTLKEHMR  216 (423)
T ss_pred             hhheeeeeccccCCcHHHHHHHH
Confidence            35679999999999999999998

>smart00451 ZnF_U1 U1-like zinc finger

Probab=86.33  E-value=0.46  Score=30.08  Aligned_cols=22  Identities=18%  Similarity=0.522  Sum_probs=15.1

Q ss_pred             ccccccCcccCCCchhhHhHHh
Q 021252           35 HFKCHVCHKKLSTAGGMAIHVL   56 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~r   56 (315)
                      .|.|++|++.|.....+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4667777777777777776664

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=84.97  E-value=0.53  Score=45.88  Aligned_cols=21  Identities=14%  Similarity=-0.118  Sum_probs=11.3

Q ss_pred             ccccCCCCCCCHHHHHHHHhh
Q 021252           77 DIEIYGMQGIPPDVLAAHYGE   97 (315)
Q Consensus        77 ~C~~Cgk~F~~~s~L~~H~r~   97 (315)
                      .|..|...|.+.+.|.+|+|.
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~  242 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRL  242 (493)
T ss_pred             hhhhccceecChHHHHHHHHh
Confidence            355555555555555555554

>PF06220 zf-U1: U1 zinc finger; InterPro: IPR013085 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=84.52  E-value=0.7  Score=30.71  Aligned_cols=23  Identities=30%  Similarity=0.794  Sum_probs=10.7

Q ss_pred             CccccCcCCcccC-Ch-HHHHHHhc
Q 021252           10 SKVWCYYCDREFD-DE-KILVQHQK   32 (315)
Q Consensus        10 eK~~C~~CgK~F~-~~-s~Lk~H~r   32 (315)
                      .||+|++|++.|. +. ...+.|.+
T Consensus         2 ~ryyCdyC~~~~~~d~~~~Rk~H~~   26 (38)
T PF06220_consen    2 PRYYCDYCKKYLTHDSPSIRKQHER   26 (38)
T ss_dssp             -S-B-TTT--B-S--SHHHHHHHT-
T ss_pred             cCeecccccceecCCChHHHHHhhc
Confidence            3688999999993 33 45577866

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. C2H2-type (classical) zinc fingers (Znf) were the first class to be characterised. They contain a short beta hairpin and an alpha helix (beta/beta/alpha structure), where a single zinc atom is held in place by Cys(2)His(2) (C2H2) residues in a tetrahedral array. C2H2 Znf's can be divided into three groups based on the number and pattern of fingers: triple-C2H2 (binds single ligand), multiple-adjacent-C2H2 (binds multiple ligands), and separated paired-C2H2 []. C2H2 Znf's are the most common DNA-binding motifs found in eukaryotic transcription factors, and have also been identified in prokaryotes []. Transcription factors usually contain several Znf's (each with a conserved beta/beta/alpha structure) capable of making multiple contacts along the DNA, where the C2H2 Znf motifs recognise DNA sequences by binding to the major groove of DNA via a short alpha-helix in the Znf, the Znf spanning 3-4 bases of the DNA []. C2H2 Znf's can also bind to RNA and protein targets []. This entry represents a C2H2-type zinc finger motif found in several U1 small nuclear ribonucleoprotein C (U1-C) proteins. Some proteins contain multiple copies of this motif. The U1 small nuclear ribonucleoprotein (U1 snRNP) binds to the pre-mRNA 5' splice site at early stages of spliceosome assembly. Recruitment of U1 to a class of weak 5' splice site is promoted by binding of the protein TIA-1 to uridine-rich sequences immediately downstream from the 5' splice site. Binding of TIA-1 in the vicinity of a 5' splice site helps to stabilise U1 snRNP recruitment, at least in part, via a direct interaction with U1-C, thus providing one molecular mechanism for the function of this splicing regulator []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 2VRD_A.

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=82.86  E-value=0.83  Score=38.45  Aligned_cols=39  Identities=10%  Similarity=0.152  Sum_probs=29.5

Q ss_pred             CCCCccccCcCCcccCChHHHHHHhcCCccccccCcccCCCchhhH
Q 021252            7 RVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMA   52 (315)
Q Consensus         7 ~~~eK~~C~~CgK~F~~~s~Lk~H~reKPfkC~~CgktF~~~~~L~   52 (315)
                      ..|.|..|..||+.|-...       ..|-.|.+||..|.....++
T Consensus         5 elGtKr~Cp~cg~kFYDLn-------k~p~vcP~cg~~~~~~~~~~   43 (129)
T TIGR02300         5 DLGTKRICPNTGSKFYDLN-------RRPAVSPYTGEQFPPEEALK   43 (129)
T ss_pred             hhCccccCCCcCccccccC-------CCCccCCCcCCccCcchhhc
Confidence            3466778999999995433       57899999999987664443

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	315
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	8e-06
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-05
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	9e-05
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	1e-04
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	4e-04
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	1e-04
1twf_A	1733	B220, DNA-directed RNA polymerase II largest subun	4e-04

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 43.4 bits (101), Expect = 8e-06
 Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 14 CYYCDREFDDEKILVQHQ---KAKHFKCHVCHKKLSTAGGMAIHVLQVHKEN 62
          C YC   F   ++  +H+   + K   C  C +   ++  +  H ++VH +N
Sbjct: 45 CPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQN 96

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4 Length = 124

 Score = 43.1 bits (101), Expect = 1e-05
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 12/74 (16%)

Query: 13  WCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLST----------AGGMAIHVLQVHKEN 62
            C  C R F D   L  H ++K  K  +  K+LS           A GM  +V       
Sbjct: 52  RCLACARYFIDSTNLKTHFRSKDHKKRL--KQLSVEPYSQEEAERAAGMGSYVPPRRLAV 109

Query: 63  VTKVPNAKPGREST 76
            T+V    P  +++
Sbjct: 110 PTEVSTEVPEMDTS 123

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 9e-05
 Identities = 19/144 (13%), Positives = 48/144 (33%), Gaps = 35/144 (24%)

Query: 4   KKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV 63
           ++  + ++++    DR ++D ++  ++        +V   +           L+      
Sbjct: 103 RQPSMMTRMYIEQRDRLYNDNQVFAKY--------NVSRLQP-------YLKLR------ 141

Query: 64  TKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGVVPG 123
             +   +P +   ++ I G+ G     +A        +V     KV          +   
Sbjct: 142 QALLELRPAK---NVLIDGVLGSGKTWVAL-------DV-CLSYKVQCKMD---FKIFWL 187

Query: 124 QLGVSYPPQSTLGMMQPIYSSAVP 147
            L     P++ L M+Q +     P
Sbjct: 188 NLKNCNSPETVLEMLQKLLYQIDP 211

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 43.3 bits (101), Expect = 9e-05
 Identities = 22/205 (10%), Positives = 44/205 (21%), Gaps = 12/205 (5%)

Query: 114 PQLVGGVVPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPP 173
            Q      P Q    + P          Y      P    P   + Q   P    +    
Sbjct: 14  LQYGQNATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQFLTPAQEQLHQQI 73

Query: 174 PAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPV----- 228
             A             +  P A                           QP   +     
Sbjct: 74  DQATTSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPLQQQQQPMAAPAYGQPSAAMGQNMR 133

Query: 229 -------VNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQ 281
                  ++  T     +    +P   + +     +  S  +++S +   +    VP   
Sbjct: 134 PMNQLYPIDLLTELPPPITDLTLPPPPLVIPPERMLVPSELSNASPDYIRSTLNAVPKNS 193

Query: 282 GLIILSLIMKIFLFTMLCLIEKGVS 306
            L+  S +    +      +   + 
Sbjct: 194 SLLKKSKLPFGLVIRPYQHLYDDID 218

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 42.5 bits (99), Expect = 1e-04
 Identities = 19/126 (15%), Positives = 33/126 (26%), Gaps = 4/126 (3%)

Query: 129 YPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQ 188
           YP       +Q   ++     PA +  P  P      +  + +PP  AV    Q  F   
Sbjct: 9   YPQA----QLQYGQNATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQFLTP 64

Query: 189 NVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTS 248
                           + +    +P   P   +   +   +      Q    +AP     
Sbjct: 65  AQEQLHQQIDQATTSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPLQQQQQPMAAPAYGQP 124

Query: 249 IALSSS 254
            A    
Sbjct: 125 SAAMGQ 130

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 41.0 bits (95), Expect = 4e-04
 Identities = 12/127 (9%), Positives = 23/127 (18%)

Query: 122 PGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQ 181
             QL             Q +           +     P                A     
Sbjct: 11  QAQLQYGQNATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQFLTPAQEQLH 70

Query: 182 QPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFS 241
           Q +         +     P + P+  + P +P         Q             +++  
Sbjct: 71  QQIDQATTSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPLQQQQQPMAAPAYGQPSAAMGQ 130

Query: 242 APIPSTS 248
              P   
Sbjct: 131 NMRPMNQ 137

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 39.8 bits (92), Expect = 1e-04
 Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 9/83 (10%)

Query: 3  KKKKRVSSKVWCYYCDREFDDEKILVQHQKAKH--------FKCHVCHKKLSTAGGMAIH 54
          ++ K+V     C YC  +  D  +   H  ++H        + C  C+        ++ H
Sbjct: 10 QQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEH 69

Query: 55 VLQVHK-ENVTKVPNAKPGREST 76
           L+ H  E   K+   K   ++ 
Sbjct: 70 NLKYHPGEENFKLTMVKRNNQTI 92

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733

 Score = 41.2 bits (96), Expect = 4e-04
 Identities = 32/173 (18%), Positives = 51/173 (29%), Gaps = 9/173 (5%)

Query: 118  GGVVPGQLGVSYPPQSTL----GMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPP 173
            GGV P                  M  P+  S      AG         +    +      
Sbjct: 1468 GGVTPYSNESGLVNADLDVKDELMFSPLVDSGSNDAMAGGFTAYGGADYGEATSPFGAYG 1527

Query: 174  PAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVP----PGMPSSTPPVTVSQPLFPVV 229
             A          P  +   P  S TSPA  P+        P    ++P  + + P +   
Sbjct: 1528 EAPTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1587

Query: 230  NNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQG 282
            + + +  S  +S   PS S    S +    S    S +  S T+  + P+   
Sbjct: 1588 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSPS 1639

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	315
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.71
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.7
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.65
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.65
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.64
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.62
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.61
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.6
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.59
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.59
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.59
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.58
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.56
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.55
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.55
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.55
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.53
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.53
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.53
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.51
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.51
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.49
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.47
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.46
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.45
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.44
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.42
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.41
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.41
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.38
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.37
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.36
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.35
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.34
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.34
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.33
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.3
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.3
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.29
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.29
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.29
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.28
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.27
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.25
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.23
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.21
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.21
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.21
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.2
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.19
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.19
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.18
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.17
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.16
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.14
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.13
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.12
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.12
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.12
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.12
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.1
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.1
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.06
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.02
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.02
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.01
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.01
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	98.99
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.97
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.96
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.95
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.95
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.95
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	98.93
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.9
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.86
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	98.86
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.83
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.79
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.76
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.74
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.7
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.69
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.68
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.68
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.67
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.66
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.66
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.66
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.66
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.66
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.66
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.65
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.65
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.65
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.64
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.64
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.64
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.64
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.64
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.64
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.63
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.63
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.63
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.63
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.63
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.63
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.63
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.63
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.63
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.63
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.63
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.62
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.62
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.62
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.62
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.62
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.62
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.62
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.62
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.61
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.61
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.61
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.61
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.6
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.6
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.59
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.58
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.58
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.58
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.58
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.58
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.58
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.58
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.57
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.57
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.57
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.57
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.57
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.57
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.56
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.55
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.55
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.55
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.55
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.55
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.55
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.55
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.55
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.54
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.54
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.54
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.54
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.54
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.54
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.54
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.54
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.54
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.54
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.54
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.53
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.53
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.53
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.53
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.53
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.53
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.52
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.52
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.52
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.51
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.51
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.49
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.49
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.49
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.48
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.48
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.46
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.46
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.46
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.45
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.45
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.43
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.42
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.4
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.37
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.35
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.34
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.33
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.33
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.33
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.32
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.32
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.32
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.32
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.31
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.31
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.3
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.3
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.3
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.3
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.3
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.3
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.29
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.29
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.29
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.29
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.29
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.29
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.29
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.29
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.29
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.29
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.28
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.28
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.28
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.28
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.28
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.28
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.28
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.28
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.28
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.27
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.27
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.27
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.27
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.27
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.27
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.27
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.27
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.27
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.27
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.27
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.27
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.27
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.26
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.26
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.26
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.26
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.26
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.26
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.26
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.26
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.26
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.25
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.25
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.25
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.25
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.25
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.25
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.25
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.25
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.24
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.24
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.24
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.24
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.24
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.24
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.23
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.23
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.23
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.23
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.23
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.23
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.23
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.23
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.23
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.23
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.22
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.22
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.22
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.21
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.21
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.21
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.2
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.2
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.2
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.19
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.18
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.17
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.17
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.16
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.16
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.15
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.15
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.14
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.13
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.13
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.13
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.13
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.12
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.12
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.12
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.11
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.11
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.1
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.1
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.1
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.09
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.09
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.36
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.08
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.07
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.07
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.06
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.06
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.05
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.03
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.02
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.28
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.02
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.01
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.0
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.0
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.0
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.99
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	97.97
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.95
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.92
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.92
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.87
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.86
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.84
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.04
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.79
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.77
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	97.75
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.71
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	97.71
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.69
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	97.57
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.57
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.56
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.55
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.54
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.54
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.53
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.51
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.47
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.44
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.41
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.4
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.4
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.39
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.39
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.37
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.35
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.34
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.34
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.3
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.26
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.24
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.33
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.23
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.19
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.16
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.13
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.13
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.11
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.08
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.13
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.09
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.86
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	96.77
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	95.5
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.46
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	93.74
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	93.37
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	91.66
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	90.8
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	90.31
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	83.14
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	82.66

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.71  E-value=4e-17  Score=128.03  Aligned_cols=83  Identities=20%  Similarity=0.379  Sum_probs=77.0

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCC
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGI   86 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~   86 (315)
                      .|.|.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|.
T Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~   84 (106)
T 2ee8_A           17 EFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKP------------FKCQECGKGFC   84 (106)
T ss_dssp             CCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCT------------TSCSSSCCCCS
T ss_pred             CeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCC------------eECCCcCCccc
Confidence            4669999999999999999998    7999999999999999999999999988875            88999999999


Q ss_pred             CHHHHHHHHhhhcCCCCcc
Q 021252           87 PPDVLAAHYGEEEEEVPSK  105 (315)
Q Consensus        87 ~~s~L~~H~r~h~~e~p~k  105 (315)
                      ....|.+|+++|.+++++.
T Consensus        85 ~~~~L~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           85 QSRTLAVHKTLHMQTSSPT  103 (106)
T ss_dssp             SHHHHHHHHHHTTSCCCCC
T ss_pred             CHHHHHHHHHHhCCCCCCc
Confidence            9999999999999887653

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.70  E-value=1.2e-17  Score=139.25  Aligned_cols=84  Identities=20%  Similarity=0.283  Sum_probs=77.2

Q ss_pred             CCc-cccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCC
Q 021252            9 SSK-VWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGM   83 (315)
Q Consensus         9 ~eK-~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk   83 (315)
                      |++ |.|.+|++.|.....|++|++    +++|+|.+|+++|.+...|.+|+++|.++++            |.|++|++
T Consensus        19 Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~------------~~C~~C~k   86 (133)
T 2lt7_A           19 GRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERR------------YQCLACGK   86 (133)
T ss_dssp             TEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCC------------EEESSSCC
T ss_pred             CCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCcc------------ccCCCCCC
Confidence            555 459999999999999999998    8999999999999999999999999999886            88999999


Q ss_pred             CCCCHHHHHHHHhhhcCCCCc
Q 021252           84 QGIPPDVLAAHYGEEEEEVPS  104 (315)
Q Consensus        84 ~F~~~s~L~~H~r~h~~e~p~  104 (315)
                      .|...+.|.+|+++|+++.+.
T Consensus        87 ~F~~~~~L~~H~~~hh~~~p~  107 (133)
T 2lt7_A           87 SFINYQFMSSHIKSVHSQDPS  107 (133)
T ss_dssp             EESSHHHHHHHHHHHTCCCTT
T ss_pred             CcCCHHHHHHHhHHhcCCCCC
Confidence            999999999999999876543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.65  E-value=2e-16  Score=121.70  Aligned_cols=81  Identities=17%  Similarity=0.308  Sum_probs=75.2

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCC
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGI   86 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~   86 (315)
                      .|.|.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|.
T Consensus         8 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~   75 (96)
T 2dmd_A            8 PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP------------FKCQICPYASR   75 (96)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCC------------EECSSSSCEES
T ss_pred             CeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCC------------ccCCCCCCccC
Confidence            4669999999999999999998    7899999999999999999999999988875            88999999999


Q ss_pred             CHHHHHHHHhhhcCCCC
Q 021252           87 PPDVLAAHYGEEEEEVP  103 (315)
Q Consensus        87 ~~s~L~~H~r~h~~e~p  103 (315)
                      ....|.+|+++|+++..
T Consensus        76 ~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           76 NSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             SHHHHHHHHTTCCSCCC
T ss_pred             CHHHHHHHHHHhcCCCC
Confidence            99999999999987653

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.65  E-value=2.1e-16  Score=124.69  Aligned_cols=83  Identities=8%  Similarity=-0.015  Sum_probs=75.3

Q ss_pred             ccccCcCCcccCChHHHHHHhc--CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCH
Q 021252           11 KVWCYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPP   88 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r--eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~   88 (315)
                      .|.|.+|++.|.....|++|++  +++|+|.+|++.|.+...|.+|++ |+++++            |.|++|++.|...
T Consensus        16 ~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~------------~~C~~C~~~f~~~   82 (107)
T 1wjp_A           16 VYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHES-KCEYKK------------LTCLECMRTFKSS   82 (107)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSSHHHHHHHHH-HCSTGG------------GEEGGGTEECSSH
T ss_pred             CeECCCCCCccCCHHHHHHHHHHCCCCccCCCCCCccCCHHHHHHHHH-cCCCCC------------ccCccccchhCCH
Confidence            4669999999999999999999  899999999999999999999995 877776            8999999999999


Q ss_pred             HHHHHHHh-hhcCCCCccc
Q 021252           89 DVLAAHYG-EEEEEVPSKM  106 (315)
Q Consensus        89 s~L~~H~r-~h~~e~p~k~  106 (315)
                      ..|++|++ .|.+++++.+
T Consensus        83 ~~L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           83 FSIWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             HHHHHHHHHTSCCCCCCCC
T ss_pred             HHHHHHHHHHcCCCCCCCC
Confidence            99999997 7887776643

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.64  E-value=1.6e-16  Score=118.38  Aligned_cols=77  Identities=18%  Similarity=0.352  Sum_probs=72.2

Q ss_pred             cccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCC
Q 021252           12 VWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIP   87 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~   87 (315)
                      |.|.+|++.|.....|.+|++    +++|+|.+|++.|.++..|.+|++.|+++++            |.|..|++.|..
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~   69 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP------------HKCQVCGKAFSQ   69 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCC------------EECTTTSCEESS
T ss_pred             ccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCC------------CcCCCcchhhCC
Confidence            569999999999999999998    8999999999999999999999999998876            889999999999


Q ss_pred             HHHHHHHHhhhcC
Q 021252           88 PDVLAAHYGEEEE  100 (315)
Q Consensus        88 ~s~L~~H~r~h~~  100 (315)
                      .+.|.+|+++|++
T Consensus        70 ~~~l~~H~~~H~g   82 (82)
T 2kmk_A           70 SSNLITHSRKHTG   82 (82)
T ss_dssp             HHHHHHHHHHHC-
T ss_pred             hHHHHHHHHhhCC
Confidence            9999999999864

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.62  E-value=3.3e-16  Score=118.84  Aligned_cols=80  Identities=23%  Similarity=0.388  Sum_probs=73.1

Q ss_pred             ccccC--cCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCC
Q 021252           11 KVWCY--YCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQ   84 (315)
Q Consensus        11 K~~C~--~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~   84 (315)
                      .|.|.  .|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.
T Consensus         4 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~   71 (90)
T 1a1h_A            4 PYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP------------FACDICGRK   71 (90)
T ss_dssp             CEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCC------------EECTTTCCE
T ss_pred             ceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCC------------ccCCCCCch
Confidence            35698  59999999999999998    8999999999999999999999999998876            889999999


Q ss_pred             CCCHHHHHHHHhhhcCCC
Q 021252           85 GIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        85 F~~~s~L~~H~r~h~~e~  102 (315)
                      |...+.|.+|+++|++++
T Consensus        72 f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           72 FARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             ESSHHHHHHHHGGGGC--
T ss_pred             hCCHHHHHHHHHHhcccC
Confidence            999999999999998864

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.61  E-value=1e-15  Score=117.45  Aligned_cols=82  Identities=23%  Similarity=0.313  Sum_probs=72.5

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCC
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGI   86 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~   86 (315)
                      .|.|.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.|+++.          .+.|.|.+|++.|.
T Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~----------~~~~~C~~C~~~f~   76 (95)
T 2yt9_A            7 GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV----------GKPYICQSCGKGFS   76 (95)
T ss_dssp             CEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCC----------CSSBCCSSSCCCBS
T ss_pred             CeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCC----------CCceECCCccchhC
Confidence            4669999999999999999998    789999999999999999999999998862          12389999999999


Q ss_pred             CHHHHHHHHh-hhcCCC
Q 021252           87 PPDVLAAHYG-EEEEEV  102 (315)
Q Consensus        87 ~~s~L~~H~r-~h~~e~  102 (315)
                      ....|.+|++ .|.++.
T Consensus        77 ~~~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           77 RPDHLNGHIKQVHSGPS   93 (95)
T ss_dssp             SHHHHHHHHHHTSCCCS
T ss_pred             CHHHHHHHHHHhcCCCC
Confidence            9999999986 676543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=5.9e-16  Score=122.32  Aligned_cols=78  Identities=17%  Similarity=0.235  Sum_probs=72.3

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCC
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGI   86 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~   86 (315)
                      .|.| +|++.|.....|++|++    +++|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|.
T Consensus        10 ~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~   76 (110)
T 2csh_A           10 LYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP------------YECNICAKRFM   76 (110)
T ss_dssp             CEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCC------------EECSSSCCEES
T ss_pred             CEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCC------------eeCCCCcchhc
Confidence            4569 99999999999999998    7899999999999999999999999988875            88999999999


Q ss_pred             CHHHHHHHHhhhcCC
Q 021252           87 PPDVLAAHYGEEEEE  101 (315)
Q Consensus        87 ~~s~L~~H~r~h~~e  101 (315)
                      ....|.+|+++|+..
T Consensus        77 ~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           77 WRDSFHRHVTSCTKS   91 (110)
T ss_dssp             CHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcccc
Confidence            999999999998753

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.59  E-value=7.6e-16  Score=133.06  Aligned_cols=99  Identities=25%  Similarity=0.374  Sum_probs=65.6

Q ss_pred             cccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccccCCCC----------------C
Q 021252           12 VWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAK----------------P   71 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~----------------~   71 (315)
                      |.|.+|++.|.....|++|++    +++|+|.+|++.|.+...|.+|++.|++++++.|..|.                .
T Consensus        50 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  129 (190)
T 2i13_A           50 YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHT  129 (190)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHH
T ss_pred             ccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhC
Confidence            446666666666666666665    56666766777776666777776666666666666652                1


Q ss_pred             CCCccccccCCCCCCCHHHHHHHHhhhcCCCCccccccC
Q 021252           72 GRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVD  110 (315)
Q Consensus        72 grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~k~~  110 (315)
                      +.+.|.|.+|++.|.....|.+|+++|.++.+++|...+
T Consensus       130 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~  168 (190)
T 2i13_A          130 GEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECG  168 (190)
T ss_dssp             CCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCC
Confidence            334567777777777777777777777777666665443

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.59  E-value=1.9e-15  Score=126.28  Aligned_cols=96  Identities=16%  Similarity=0.111  Sum_probs=78.9

Q ss_pred             ccccCcCCcccCChHHHHHHhc-----CCc--------cccccCcccCCCchhhHhHHhhhccCcccccCC--CC-----
Q 021252           11 KVWCYYCDREFDDEKILVQHQK-----AKH--------FKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN--AK-----   70 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r-----eKP--------fkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~--~~-----   70 (315)
                      .+.|.+|++.|.+...|++|++     +++        |+|.+|++.|.+...|.+|++.|+++++|.|..  |.     
T Consensus        25 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  104 (155)
T 2rpc_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFAR  104 (155)
T ss_dssp             SSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESC
T ss_pred             ccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCC
Confidence            4568999999999999999987     222        789999999999999999999999988888875  52     


Q ss_pred             -----------CCCCcccccc--CCCCCCCHHHHHHHHhhhcCCCCccc
Q 021252           71 -----------PGRESTDIEI--YGMQGIPPDVLAAHYGEEEEEVPSKM  106 (315)
Q Consensus        71 -----------~grr~~~C~~--Cgk~F~~~s~L~~H~r~h~~e~p~k~  106 (315)
                                 .+.+.|.|.+  |++.|.....|.+|+++|+++++++|
T Consensus       105 ~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c  153 (155)
T 2rpc_A          105 SENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS  153 (155)
T ss_dssp             HHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCS
T ss_pred             HHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCC
Confidence                       3445688886  99999988899999888888887765

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.59  E-value=6.9e-16  Score=133.32  Aligned_cols=93  Identities=22%  Similarity=0.312  Sum_probs=78.8

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccccCCCC----------------
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAK----------------   70 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~----------------   70 (315)
                      .|.|.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.|+++++|.|..|.                
T Consensus        77 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H  156 (190)
T 2i13_A           77 PYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTH  156 (190)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhc
Confidence            4669999999999999999988    78899999999999999999999999999999998873                


Q ss_pred             CCCCccccccCCCCCCCHHHHHHHHhhhcCCCC
Q 021252           71 PGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVP  103 (315)
Q Consensus        71 ~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p  103 (315)
                      .+.+.|.|.+|++.|.....|++|+++|+++++
T Consensus       157 ~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~  189 (190)
T 2i13_A          157 TGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT  189 (190)
T ss_dssp             HCCCCEECTTTCCEESSHHHHHHHHTTC-----
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHhcCCCCC
Confidence            245569999999999999999999999998764

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.58  E-value=3.7e-15  Score=119.16  Aligned_cols=87  Identities=22%  Similarity=0.264  Sum_probs=65.9

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhh---ccCcccccCCCCCCCCccccccCCC
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQV---HKENVTKVPNAKPGRESTDIEIYGM   83 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~h---h~ekp~~cp~~~~grr~~~C~~Cgk   83 (315)
                      .|.|.+|++.|.....|++|++    +++|+|.+|++.|.+...|.+|++.+   .++++            |.|.+|++
T Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~------------~~C~~C~~   74 (124)
T 2dlq_A            7 GVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV------------FTCSVCQE   74 (124)
T ss_dssp             SCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCC------------EECSSSCC
T ss_pred             CCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCC------------eECCCCCC
Confidence            4679999999999999999988    78999999999999999999999865   34444            55556666


Q ss_pred             CCCCHHHHHHHHhhhcCCCCcccccc
Q 021252           84 QGIPPDVLAAHYGEEEEEVPSKMAKV  109 (315)
Q Consensus        84 ~F~~~s~L~~H~r~h~~e~p~k~~k~  109 (315)
                      .|.....|++|+++|.++.+++|...
T Consensus        75 ~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (124)
T 2dlq_A           75 TFRRRMELRLHMVSHTGEMPYKCSSC  100 (124)
T ss_dssp             EESSHHHHHHHHHHHSSSCSEECSSS
T ss_pred             ccCCHHHHHHHHHHcCCCCCccCCCc
Confidence            66666666666666655555555443

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.56  E-value=1.3e-15  Score=110.43  Aligned_cols=58  Identities=16%  Similarity=0.170  Sum_probs=50.1

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      ||||+|.+|+++|.++.+|.+|+++|.++++            |.|.+||+.|.+.+.|++|+++|+++.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp------------~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRP------------RSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCC------------EECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcC------------eECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            7889999999999999999999988888876            888888999999999999999888764

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.55  E-value=8.2e-15  Score=126.54  Aligned_cols=108  Identities=19%  Similarity=0.226  Sum_probs=88.4

Q ss_pred             CCCCCCCCCC-cccc--CcCCcccCChHHHHHHhc----CCcccc--ccCcccCCCchhhHhHHhhhccCcccccC--CC
Q 021252            1 MGKKKKRVSS-KVWC--YYCDREFDDEKILVQHQK----AKHFKC--HVCHKKLSTAGGMAIHVLQVHKENVTKVP--NA   69 (315)
Q Consensus         1 m~rKk~~~~e-K~~C--~~CgK~F~~~s~Lk~H~r----eKPfkC--~~CgktF~~~~~L~rH~r~hh~ekp~~cp--~~   69 (315)
                      |+.++....+ .|.|  .+|++.|.....|++|++    +++|+|  .+|++.|.+...|.+|+++|+++++|.|.  .|
T Consensus         1 ~~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C   80 (190)
T 1tf6_A            1 MGEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGC   80 (190)
T ss_dssp             ---------CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSC
T ss_pred             CccccccCCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCC
Confidence            4555554444 5669  689999999999999998    899999  88999999999999999999999999998  55


Q ss_pred             C------------------CCCCcccc--ccCCCCCCCHHHHHHHHhhhcCCCCccccc
Q 021252           70 K------------------PGRESTDI--EIYGMQGIPPDVLAAHYGEEEEEVPSKMAK  108 (315)
Q Consensus        70 ~------------------~grr~~~C--~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~k  108 (315)
                      .                  .+.+.|.|  ++|++.|.....|++|+++|+++++++|..
T Consensus        81 ~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  139 (190)
T 1tf6_A           81 DLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPH  139 (190)
T ss_dssp             CCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCS
T ss_pred             CCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCC
Confidence            2                  34456899  899999999999999999999999998865

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.55  E-value=5.3e-15  Score=117.60  Aligned_cols=84  Identities=18%  Similarity=0.319  Sum_probs=76.3

Q ss_pred             ccccCc--CCcccCChHHHHHHhc----CCccccc--cCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCC
Q 021252           11 KVWCYY--CDREFDDEKILVQHQK----AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYG   82 (315)
Q Consensus        11 K~~C~~--CgK~F~~~s~Lk~H~r----eKPfkC~--~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cg   82 (315)
                      .|.|.+  |++.|.....|.+|++    +++|+|.  .|++.|.+...|.+|++.|+++++            |.|.+|+
T Consensus         6 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~   73 (119)
T 2jp9_A            6 PFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP------------FQCKTCQ   73 (119)
T ss_dssp             CBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCC------------EECTTTC
T ss_pred             eeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCC------------ccCCccC
Confidence            466997  9999999999999998    8999999  799999999999999999998876            7888899


Q ss_pred             CCCCCHHHHHHHHhhhcCCCCccc
Q 021252           83 MQGIPPDVLAAHYGEEEEEVPSKM  106 (315)
Q Consensus        83 k~F~~~s~L~~H~r~h~~e~p~k~  106 (315)
                      +.|.....|.+|+++|.++.+++|
T Consensus        74 ~~f~~~~~l~~H~~~h~~~~~~~C   97 (119)
T 2jp9_A           74 RKFSRSDHLKTHTRTHTGEKPFSC   97 (119)
T ss_dssp             CEESCHHHHHHHHHHHHTCCCEEC
T ss_pred             chhCCHHHHHHHHHHhcCCCCeeC
Confidence            999999999999999988888777

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.55  E-value=7.1e-15  Score=113.53  Aligned_cols=78  Identities=18%  Similarity=0.352  Sum_probs=72.0

Q ss_pred             ccccCc--CCcccCChHHHHHHhc----CCccccc--cCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCC
Q 021252           11 KVWCYY--CDREFDDEKILVQHQK----AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYG   82 (315)
Q Consensus        11 K~~C~~--CgK~F~~~s~Lk~H~r----eKPfkC~--~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cg   82 (315)
                      .|.|.+  |++.|.....|++|++    +++|+|.  .|++.|.+...|.+|++.|+++++            |.|.+|+
T Consensus        15 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~   82 (100)
T 2ebt_A           15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP------------FQCGVCN   82 (100)
T ss_dssp             CEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCS------------CBCSSSC
T ss_pred             ceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCC------------eECCCCc
Confidence            466997  9999999999999998    7999996  699999999999999999998876            8899999


Q ss_pred             CCCCCHHHHHHHHhhhcC
Q 021252           83 MQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        83 k~F~~~s~L~~H~r~h~~  100 (315)
                      +.|.....|.+|+++|.+
T Consensus        83 ~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           83 RSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             CBCSSHHHHHHHHHHHCC
T ss_pred             CccCCHHHHHHHHHHhCC
Confidence            999999999999999864

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.53  E-value=1e-14  Score=115.99  Aligned_cols=80  Identities=14%  Similarity=0.069  Sum_probs=71.0

Q ss_pred             ccccCcCCcccCChHHHHHHhc------CCc-cccccCcccC--CCchhhHhHHhhhccCcccccCCCCCCCCccccccC
Q 021252           11 KVWCYYCDREFDDEKILVQHQK------AKH-FKCHVCHKKL--STAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIY   81 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r------eKP-fkC~~CgktF--~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~C   81 (315)
                      .|.|.+|++.|.....|++|++      +++ ++|.+|++.|  .++..|.+|+++|+++++            |.|++|
T Consensus        19 ~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~------------~~C~~C   86 (115)
T 2dmi_A           19 KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKV------------LKCMYC   86 (115)
T ss_dssp             SEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSS------------CBCSSS
T ss_pred             CEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcc------------eECCCC
Confidence            4569999999999999999987      454 4599999999  999999999999888876            889999


Q ss_pred             CCCCCCHHHHHHHHhhhcCCC
Q 021252           82 GMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        82 gk~F~~~s~L~~H~r~h~~e~  102 (315)
                      ++.|.....|++|+++|+...
T Consensus        87 ~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           87 GHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             CCBCSSHHHHHHHHHHTTTTT
T ss_pred             CCccCCHHHHHHHHHHhCCcc
Confidence            999999999999999987544

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.53  E-value=9e-15  Score=110.60  Aligned_cols=77  Identities=18%  Similarity=0.306  Sum_probs=71.7

Q ss_pred             CccccCc--CCcccCChHHHHHHhc----CCccccc--cCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccC
Q 021252           10 SKVWCYY--CDREFDDEKILVQHQK----AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIY   81 (315)
Q Consensus        10 eK~~C~~--CgK~F~~~s~Lk~H~r----eKPfkC~--~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~C   81 (315)
                      ..|.|.+  |++.|.....|.+|++    +++|+|.  +|++.|.+...|.+|++.|+++++            |.|..|
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C   71 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP------------FQCQKC   71 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCC------------EECSSS
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCC------------ccCCCC
Confidence            3577999  9999999999999998    7899997  699999999999999999998876            889999


Q ss_pred             CCCCCCHHHHHHHHhhh
Q 021252           82 GMQGIPPDVLAAHYGEE   98 (315)
Q Consensus        82 gk~F~~~s~L~~H~r~h   98 (315)
                      ++.|...+.|.+|+++|
T Consensus        72 ~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           72 DRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             SCEESSHHHHHHHGGGG
T ss_pred             CcccCCHHHHHHHHHhh
Confidence            99999999999999987

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.53  E-value=1.1e-14  Score=116.46  Aligned_cols=79  Identities=16%  Similarity=0.291  Sum_probs=72.1

Q ss_pred             ccccCcCCcccCChHHHHHHhc-------CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCC
Q 021252           11 KVWCYYCDREFDDEKILVQHQK-------AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGM   83 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r-------eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk   83 (315)
                      .|.|.+|++.|.+...|.+|++       +++|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++
T Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~  102 (124)
T 2dlq_A           35 PFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMP------------YKCSSCSQ  102 (124)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCS------------EECSSSCC
T ss_pred             CeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC------------ccCCCccc
Confidence            4679999999999999999975       7899999999999999999999999998876            88999999


Q ss_pred             CCCCHHHHHHHHhh-hcCC
Q 021252           84 QGIPPDVLAAHYGE-EEEE  101 (315)
Q Consensus        84 ~F~~~s~L~~H~r~-h~~e  101 (315)
                      .|.....|++|++. |.++
T Consensus       103 ~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A          103 QFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             EESSHHHHHHHHHHTSSCS
T ss_pred             hhCCHHHHHHHHHHHCCCC
Confidence            99999999999985 5554

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.51  E-value=1.6e-14  Score=115.98  Aligned_cols=86  Identities=19%  Similarity=0.222  Sum_probs=58.1

Q ss_pred             ccccC--cCCcccCChHHHHHHhc---CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCC
Q 021252           11 KVWCY--YCDREFDDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQG   85 (315)
Q Consensus        11 K~~C~--~CgK~F~~~s~Lk~H~r---eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F   85 (315)
                      .|.|.  .|++.|.....|++|++   +++|+|.+|++.|.+...|.+|++.|++++++.|..          +.|++.|
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----------~~C~~~f   74 (124)
T 1ubd_C            5 TIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF----------EGCGKRF   74 (124)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCS----------TTCCCEE
T ss_pred             cccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCC----------CCCcCcc
Confidence            45687  78888888888888887   778888888888888888888888887777644431          1244444


Q ss_pred             CCHHHHHHHHhhhcCCCCccc
Q 021252           86 IPPDVLAAHYGEEEEEVPSKM  106 (315)
Q Consensus        86 ~~~s~L~~H~r~h~~e~p~k~  106 (315)
                      .....|++|+++|.++.+++|
T Consensus        75 ~~~~~l~~H~~~h~~~~~~~C   95 (124)
T 1ubd_C           75 SLDFNLRTHVRIHTGDRPYVC   95 (124)
T ss_dssp             SCHHHHHHHHHHHHCCCCCCC
T ss_pred             CCHHHHHHHHHHhCCCCceEC
Confidence            444444444444444444444

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.51  E-value=1.3e-14  Score=116.56  Aligned_cols=82  Identities=20%  Similarity=0.246  Sum_probs=71.4

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCcccccc--CcccCCCchhhHhHHhhhccCcccccCCCCCCCCcccc--ccCC
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDI--EIYG   82 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~--CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C--~~Cg   82 (315)
                      .|.|.+|++.|.....|.+|++    +++|+|.+  |++.|.+...|.+|++.|+++++            |.|  +.|+
T Consensus        34 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~~~C~  101 (124)
T 1ubd_C           34 VHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRP------------YVCPFDGCN  101 (124)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCC------------CCCCSTTCC
T ss_pred             CeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCc------------eECCCCCCC
Confidence            4669999999999999999998    88999986  99999999999999999999876            777  4699


Q ss_pred             CCCCCHHHHHHHHhhhcCCCCc
Q 021252           83 MQGIPPDVLAAHYGEEEEEVPS  104 (315)
Q Consensus        83 k~F~~~s~L~~H~r~h~~e~p~  104 (315)
                      +.|.....|.+|+++|++++..
T Consensus       102 ~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C          102 KKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             CCCSSTTTTHHHHHHHC-----
T ss_pred             CccCCHHHHHHHHHHHcccccC
Confidence            9999999999999999987643

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.49  E-value=2.2e-14  Score=113.93  Aligned_cols=76  Identities=24%  Similarity=0.387  Sum_probs=70.7

Q ss_pred             ccccC--cCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCcccc--ccCC
Q 021252           11 KVWCY--YCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDI--EIYG   82 (315)
Q Consensus        11 K~~C~--~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C--~~Cg   82 (315)
                      .|.|.  .|++.|.....|++|++    +++|+|.+|++.|.+...|.+|+++|+++++            |.|  ..|+
T Consensus        36 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~~~C~  103 (119)
T 2jp9_A           36 PYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKP------------FSCRWPSCQ  103 (119)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCC------------EECCSTTCC
T ss_pred             CccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCC------------eeCCCCCCc
Confidence            46799  69999999999999998    8999999999999999999999999999876            777  7899


Q ss_pred             CCCCCHHHHHHHHhhh
Q 021252           83 MQGIPPDVLAAHYGEE   98 (315)
Q Consensus        83 k~F~~~s~L~~H~r~h   98 (315)
                      +.|.....|.+|+++|
T Consensus       104 ~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A          104 KKFARSDELVRHHNMH  119 (119)
T ss_dssp             CEESSHHHHHHHHHTC
T ss_pred             cccCCHHHHHHHHhcC
Confidence            9999999999999876

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=4.2e-14  Score=110.59  Aligned_cols=74  Identities=19%  Similarity=0.113  Sum_probs=63.1

Q ss_pred             cCChHHHHHHhc----CCccccccCcccCC-CchhhHhHHhhhcc-CcccccCCCCCCCCccccccCCCCCCCHHHHHHH
Q 021252           21 FDDEKILVQHQK----AKHFKCHVCHKKLS-TAGGMAIHVLQVHK-ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAH   94 (315)
Q Consensus        21 F~~~s~Lk~H~r----eKPfkC~~CgktF~-~~~~L~rH~r~hh~-ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H   94 (315)
                      +.....+.+|++    +++|+|.+|++.|. ++..|++|+++|++ +++            |.|.+|++.|.+...|++|
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~------------~~C~~C~k~F~~~~~L~~H   73 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDA------------LKCQHCRKQFKSKAGLNYH   73 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHH------------HSCSSSCCCCSCHHHHHHH
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCC------------EECCCCCCccCCHHHHHHH
Confidence            444444555555    89999999999999 99999999999998 776            8899999999999999999


Q ss_pred             HhhhcCCCCccc
Q 021252           95 YGEEEEEVPSKM  106 (315)
Q Consensus        95 ~r~h~~e~p~k~  106 (315)
                      +++|+++++...
T Consensus        74 ~~~h~~~kp~~~   85 (98)
T 2gqj_A           74 TMAEHSAKPSDA   85 (98)
T ss_dssp             HHHHSCSCSSCC
T ss_pred             HHHHcCCCCCCC
Confidence            999998876543

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.46  E-value=2.8e-14  Score=103.44  Aligned_cols=53  Identities=17%  Similarity=0.465  Sum_probs=48.7

Q ss_pred             Ccc-ccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCc
Q 021252           10 SKV-WCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        10 eK~-~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      ||+ .|.+|||.|.+.++|++|++    +|+|+|.+|+++|.++++|.+|+++|.+|+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            454 59999999999999999999    999999999999999999999999988764

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.45  E-value=4.9e-15  Score=112.90  Aligned_cols=77  Identities=18%  Similarity=0.217  Sum_probs=70.6

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCC
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGI   86 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~   86 (315)
                      .|.|.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.||+. +            +.|..|++.|.
T Consensus         3 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~-~------------~~c~~C~~~f~   69 (88)
T 1llm_C            3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHIL-P------------ILEDKVEELLS   69 (88)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHH-H------------HHHHHHHHHHH
T ss_pred             CCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCC-c------------chHHHHHHHHH
Confidence            3569999999999999999998    89999999999999999999999999863 3            88999999999


Q ss_pred             CHHHHHHHHhhhcC
Q 021252           87 PPDVLAAHYGEEEE  100 (315)
Q Consensus        87 ~~s~L~~H~r~h~~  100 (315)
                      ....|+.|++.+++
T Consensus        70 ~~~~L~~H~~~~h~   83 (88)
T 1llm_C           70 KNYHLENEVARLKK   83 (88)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHhhhHHHHHHHHH
Confidence            99999999988654

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.7e-13  Score=113.95  Aligned_cols=77  Identities=23%  Similarity=0.257  Sum_probs=42.1

Q ss_pred             cccCChHHHHHHhc----CCcccccc--CcccCCCchhhHhHHhhhccCcccccCCCCCCCCcccccc--CCCCCCCHHH
Q 021252           19 REFDDEKILVQHQK----AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI--YGMQGIPPDV   90 (315)
Q Consensus        19 K~F~~~s~Lk~H~r----eKPfkC~~--CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~--Cgk~F~~~s~   90 (315)
                      +.|.....|++|++    +++|+|.+  |++.|.+...|.+|++.|+++++            |.|.+  |++.|.....
T Consensus        47 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~~~C~~~f~~~~~  114 (155)
T 2gli_A           47 RPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKP------------YMCEHEGCSKAFSNASD  114 (155)
T ss_dssp             CCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCC------------EECCSTTCCCEESSSST
T ss_pred             hhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCC------------eeCCCCCCCCccCCHHH
Confidence            55555555555544    44555543  55555555555555555554444            55555  6666666666


Q ss_pred             HHHHH-hhhcCCCCcccc
Q 021252           91 LAAHY-GEEEEEVPSKMA  107 (315)
Q Consensus        91 L~~H~-r~h~~e~p~k~~  107 (315)
                      |++|+ +.|.++++++|.
T Consensus       115 L~~H~~~~H~~~~~~~C~  132 (155)
T 2gli_A          115 RAKHQNRTHSNEKPYVCK  132 (155)
T ss_dssp             THHHHHHTTCSCCCEECC
T ss_pred             HHHHHHHhcCCCCCeeCC
Confidence            66665 556655555554

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.42  E-value=1.9e-13  Score=113.64  Aligned_cols=86  Identities=20%  Similarity=0.236  Sum_probs=76.4

Q ss_pred             ccccCcCCcccCChHHHHHHhc-------CCcccccc-----CcccCCCchhhHhHHhhhccCcccccCCCCCCCCcccc
Q 021252           11 KVWCYYCDREFDDEKILVQHQK-------AKHFKCHV-----CHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDI   78 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r-------eKPfkC~~-----CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C   78 (315)
                      .+.|++|++.|.....|++|++       +++|+|.+     |++.|.+...|.+|++.|+++++            |.|
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~------------~~C   70 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKP------------HKC   70 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCC------------CCC
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCC------------ccC
Confidence            4679999999999999999985       68899875     34999999999999999998876            677


Q ss_pred             c--cCCCCCCCHHHHHHHHhhhcCCCCccccc
Q 021252           79 E--IYGMQGIPPDVLAAHYGEEEEEVPSKMAK  108 (315)
Q Consensus        79 ~--~Cgk~F~~~s~L~~H~r~h~~e~p~k~~k  108 (315)
                      .  .|++.|.....|.+|++.|.++.+++|..
T Consensus        71 ~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  102 (155)
T 2gli_A           71 TFEGCRKSYSRLENLKTHLRSHTGEKPYMCEH  102 (155)
T ss_dssp             CSTTCCCCCSSHHHHHHHHHHTTTCCCEECCS
T ss_pred             CCCCCCCcccCHHHHHHHHHHcCCCCCeeCCC
Confidence            6  49999999999999999999999888875

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.41  E-value=1.7e-13  Score=102.18  Aligned_cols=73  Identities=19%  Similarity=0.282  Sum_probs=66.3

Q ss_pred             ccc--CcCCcccCChHHHHHHhc----CCcccccc--CcccCCCchhhHhHHhhhccCcccccCCCCCCCCcccccc---
Q 021252           12 VWC--YYCDREFDDEKILVQHQK----AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI---   80 (315)
Q Consensus        12 ~~C--~~CgK~F~~~s~Lk~H~r----eKPfkC~~--CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~---   80 (315)
                      |.|  .+|++.|.....|++|++    +++|+|.+  |++.|.+...|.+|+++|++               |.|..   
T Consensus         2 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---------------~~C~~~~~   66 (85)
T 2j7j_A            2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---------------YPCKKDDS   66 (85)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---------------EECCSCSS
T ss_pred             ccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---------------CCCCCCCC
Confidence            569  889999999999999998    89999998  99999999999999998876               44556   


Q ss_pred             CCCCCCCHHHHHHHHhhhc
Q 021252           81 YGMQGIPPDVLAAHYGEEE   99 (315)
Q Consensus        81 Cgk~F~~~s~L~~H~r~h~   99 (315)
                      |++.|.....|.+|+++|+
T Consensus        67 C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           67 CSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             CCCEESSHHHHHHHHHHCC
T ss_pred             CCCccCCHHHHHHHHHhcC
Confidence            9999999999999999874

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.41  E-value=1.7e-13  Score=114.04  Aligned_cols=72  Identities=19%  Similarity=0.364  Sum_probs=65.5

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCC
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGI   86 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~   86 (315)
                      .|.|++|++.|.+...|++|++    +++|+|.+|+++|.++..|.+|+++||+++++.+..+      |.|.+|++.|.
T Consensus        50 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~------~~C~~C~k~~~  123 (133)
T 2lt7_A           50 KYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKL------YRLHPCRSLQI  123 (133)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCC------EEECCCCSSCC
T ss_pred             CeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCC------eecCCCCchhh
Confidence            4569999999999999999998    8999999999999999999999999999988666554      99999999987


Q ss_pred             CH
Q 021252           87 PP   88 (315)
Q Consensus        87 ~~   88 (315)
                      +.
T Consensus       124 ~~  125 (133)
T 2lt7_A          124 RQ  125 (133)
T ss_dssp             CC
T ss_pred             hc
Confidence            64

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=4.1e-13  Score=99.64  Aligned_cols=54  Identities=20%  Similarity=0.382  Sum_probs=31.6

Q ss_pred             cccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccc
Q 021252           12 VWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTK   65 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~   65 (315)
                      |.|.+|++.|....+|++|++    +++|+|.+|++.|.++..|.+|+++|+++++|+
T Consensus        19 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~   76 (77)
T 2cot_A           19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS   76 (77)
T ss_dssp             SBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCC
T ss_pred             EECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            346666666666666666655    555666666666666666666665555555543

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.37  E-value=9.2e-13  Score=113.57  Aligned_cols=89  Identities=21%  Similarity=0.287  Sum_probs=63.9

Q ss_pred             ccc--CcCCcccCChHHHHHHhc----CCccccc--cCcccCCCchhhHhHHhhhc--cCccccc--CCCC---------
Q 021252           12 VWC--YYCDREFDDEKILVQHQK----AKHFKCH--VCHKKLSTAGGMAIHVLQVH--KENVTKV--PNAK---------   70 (315)
Q Consensus        12 ~~C--~~CgK~F~~~s~Lk~H~r----eKPfkC~--~CgktF~~~~~L~rH~r~hh--~ekp~~c--p~~~---------   70 (315)
                      |.|  .+|++.|.....|++|++    +++|+|.  .|++.|.++..|.+|++.+|  ++++|.|  ..|.         
T Consensus        43 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L  122 (190)
T 1tf6_A           43 FPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL  122 (190)
T ss_dssp             SCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHH
T ss_pred             ccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHH
Confidence            457  667777777777777776    5677777  67777777777777774444  4556666  5551         


Q ss_pred             -------CCCCcccccc--CCCCCCCHHHHHHHHhhhcC
Q 021252           71 -------PGRESTDIEI--YGMQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        71 -------~grr~~~C~~--Cgk~F~~~s~L~~H~r~h~~  100 (315)
                             .+.+.|.|.+  |++.|.....|++|+++|++
T Consensus       123 ~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             HHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             HHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence                   2345588876  99999999999999998887

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=6.1e-13  Score=98.52  Aligned_cols=64  Identities=23%  Similarity=0.379  Sum_probs=57.4

Q ss_pred             ccccCc--CCcccCChHHHHHHhc-----CCcccccc--CcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccC
Q 021252           11 KVWCYY--CDREFDDEKILVQHQK-----AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIY   81 (315)
Q Consensus        11 K~~C~~--CgK~F~~~s~Lk~H~r-----eKPfkC~~--CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~C   81 (315)
                      .|.|..  |++.|.+..+|++|++     +++|+|.+  |++.|.++..|.+|+++|+++++            |.|.+|
T Consensus         7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~------------~~C~~C   74 (79)
T 2dlk_A            7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD------------YICEFS   74 (79)
T ss_dssp             SEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCC------------CSCCSS
T ss_pred             CccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCC------------eeCCCC
Confidence            456876  9999999999999986     89999999  99999999999999999999886            788889


Q ss_pred             CCCCC
Q 021252           82 GMQGI   86 (315)
Q Consensus        82 gk~F~   86 (315)
                      ++.|.
T Consensus        75 ~k~F~   79 (79)
T 2dlk_A           75 GPSSG   79 (79)
T ss_dssp             SCCCC
T ss_pred             CCCCC
Confidence            98873

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.35  E-value=1.8e-13  Score=111.11  Aligned_cols=77  Identities=12%  Similarity=0.147  Sum_probs=66.7

Q ss_pred             cccCcCCcccC------ChHHHHHHhc---CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCC
Q 021252           12 VWCYYCDREFD------DEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYG   82 (315)
Q Consensus        12 ~~C~~CgK~F~------~~s~Lk~H~r---eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cg   82 (315)
                      ++|++|++.|.      ....|..|++   +++|+|.+|++.|.+..+|.+|+++|  +++            |.|.+|+
T Consensus        42 ~~c~~~~~~~~~~~~~~~~~~l~~h~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~------------~~C~~C~  107 (129)
T 2wbt_A           42 LIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHT------------KVCPVCK  107 (129)
T ss_dssp             HHHHHHHHHHHCGGGTTTHHHHHHHHHHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCC------------CBCTTTC
T ss_pred             ccchhhhcccCCCcccCCHHHHHHHHHhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCC------------CCCCCCC
Confidence            45777766654      7788888887   99999999999999999999999887  654            8899999


Q ss_pred             CCCCCHHHHHHHHhhhcCCC
Q 021252           83 MQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        83 k~F~~~s~L~~H~r~h~~e~  102 (315)
                      +.|...+.|++|+++|+++.
T Consensus       108 k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A          108 KEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             CBCSSHHHHHHHHHHTTCCC
T ss_pred             cccCCHHHHHHHHHHHCCcc
Confidence            99999999999999998753

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=7.2e-13  Score=98.28  Aligned_cols=62  Identities=21%  Similarity=0.261  Sum_probs=58.1

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~  106 (315)
                      +++|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|.....|++|+++|+++++++|
T Consensus        16 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           16 RRRYKCDECGKSFSHSSDLSKHRRTHTGEKP------------YKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTTTCCSCS------------EECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCEECCCCCcccCCHHHHHHHHHHcCCCcC------------eeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            8999999999999999999999999988875            8899999999999999999999999988765

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.34  E-value=9.9e-13  Score=96.80  Aligned_cols=59  Identities=27%  Similarity=0.356  Sum_probs=40.6

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVP  103 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p  103 (315)
                      +++|+|.+|++.|.++..|.+|++.|+++++            |.|.+|++.|.....|++|+++|+++++
T Consensus        15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~------------~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKP------------YRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCSBCCTTSSCCBSCHHHHHHHHHHHCCCCS------------EECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             CCCeECCCCCceeCCHHHHHHHHHHcCCCCC------------EECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            5667777777777777777777766666654            6666677777777777777777766553

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=1.6e-12  Score=101.98  Aligned_cols=72  Identities=14%  Similarity=0.126  Sum_probs=64.4

Q ss_pred             CcccCChHHHHHHhc----CCccccccCcccC-CCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHH
Q 021252           18 DREFDDEKILVQHQK----AKHFKCHVCHKKL-STAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLA   92 (315)
Q Consensus        18 gK~F~~~s~Lk~H~r----eKPfkC~~CgktF-~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~   92 (315)
                      ...|.....|.+|++    +++|+|.+|++.| .++.+|++|+++| ++++            |.|.+|++.|.....|+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~------------~~C~~Cgk~F~~~~~L~   79 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEM------------FTCHHCGKQLRSLAGMK   79 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCC------------CCCSSSCCCCSSHHHHH
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCC------------eECCCCCCeeCCHHHHH
Confidence            456788888888887    8999999999999 9999999999998 8775            88999999999999999


Q ss_pred             HH-HhhhcCCC
Q 021252           93 AH-YGEEEEEV  102 (315)
Q Consensus        93 ~H-~r~h~~e~  102 (315)
                      +| +++|.++.
T Consensus        80 ~H~~~~H~~~p   90 (96)
T 2ctd_A           80 YHVMANHNSLP   90 (96)
T ss_dssp             HHHHHHTCCCS
T ss_pred             HHhHHhcCCCC
Confidence            99 88887643

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=2.5e-12  Score=96.39  Aligned_cols=51  Identities=27%  Similarity=0.494  Sum_probs=31.2

Q ss_pred             ccCcCCcccCChHHHHHHhc----C----CccccccCcccCCCchhhHhHHhhhccCcc
Q 021252           13 WCYYCDREFDDEKILVQHQK----A----KHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (315)
Q Consensus        13 ~C~~CgK~F~~~s~Lk~H~r----e----KPfkC~~CgktF~~~~~L~rH~r~hh~ekp   63 (315)
                      .|.+|++.|.....|++|++    +    ++|+|.+|++.|.++..|.+|+++|++++.
T Consensus        17 ~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~   75 (86)
T 1x6h_A           17 ACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG   75 (86)
T ss_dssp             ECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCS
T ss_pred             cCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCC
Confidence            46666666666666666654    1    456666666666666666666666666554

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.30  E-value=1.7e-12  Score=95.55  Aligned_cols=53  Identities=19%  Similarity=0.445  Sum_probs=50.1

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcc
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp   63 (315)
                      .|.|.+|++.|.....|++|++    +++|+|.+|++.|.++..|.+|+++|+++++
T Consensus        17 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           17 PYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             SBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             CeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            4669999999999999999998    8999999999999999999999999999886

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.29  E-value=5e-13  Score=103.38  Aligned_cols=58  Identities=19%  Similarity=0.232  Sum_probs=46.3

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHH-hhhcCCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHY-GEEEEEV  102 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~-r~h~~e~  102 (315)
                      ++.|.|.+|++.|.++.+|++|+++|+++++            |.|++|++.|.+.+.|++|+ +.|.+|.
T Consensus        26 ~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           26 AECHLCPVCGESFASKGAQERHLRLLHAAQV------------FPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CTTEECTTSCCEESSHHHHHHHHHTTSCSSS------------EECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCEECCCCCCCcCcHHHHhhhhhhccCCCc------------cCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            6778888888888888888888888888776            77888888888888888886 4566553

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=1.8e-12  Score=94.32  Aligned_cols=50  Identities=20%  Similarity=0.470  Sum_probs=25.1

Q ss_pred             ccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCc
Q 021252           13 WCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        13 ~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      .|.+|++.|....+|++|++    +++|+|.+|++.|.++..|.+|++.||+++
T Consensus        11 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A           11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             ECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             ECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            35555555555555555544    444555555555555555555555554444

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=2e-12  Score=94.73  Aligned_cols=61  Identities=18%  Similarity=0.115  Sum_probs=42.3

Q ss_pred             HhcCCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCC
Q 021252           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        30 H~reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      |..+++|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|.....|++|+++|+++.
T Consensus         9 H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~------------~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            9 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKP------------YKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCC------------EECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             cCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCC------------eECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            3336777777777777777777777777666654            666777777777777777777776553

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=1.7e-12  Score=97.29  Aligned_cols=75  Identities=13%  Similarity=0.127  Sum_probs=62.2

Q ss_pred             HHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCC
Q 021252           27 LVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        27 Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      |++|++    +++|+|.+|++.|.+...|.+|++.+|.++.        .++.|.|.+|++.|.....|.+|+++|+++.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~--------~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   74 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF--------VPAAFVCSKCGKTFTRRNTMARHADNCAGPD   74 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSC--------CCCCEECSSSCCEESCHHHHHHHHHHCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcC--------CCcceECCCCCChhCCHHHHHHHHHHccCCC
Confidence            344555    8999999999999999999999998887631        1124999999999999999999999999988


Q ss_pred             Ccccccc
Q 021252          103 PSKMAKV  109 (315)
Q Consensus       103 p~k~~k~  109 (315)
                      ...+...
T Consensus        75 ~~~~~~~   81 (86)
T 1x6h_A           75 GVEGENS   81 (86)
T ss_dssp             SCCCCCC
T ss_pred             CcccCCC
Confidence            7766543

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=3.8e-12  Score=92.60  Aligned_cols=60  Identities=15%  Similarity=0.217  Sum_probs=56.7

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~  104 (315)
                      +++|+|.+|++.|.++..|.+|++.|+++++            |.|.+|++.|.....|++|+++|+++++.
T Consensus         7 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~------------~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            7 GHPEKCSECSYSCSSKAALRIHERIHCTDRP------------FKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHGGGCCSCS------------EECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCC------------EeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            8999999999999999999999999888876            88999999999999999999999998876

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.25  E-value=3.7e-12  Score=88.56  Aligned_cols=55  Identities=16%  Similarity=0.192  Sum_probs=33.3

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE   99 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~   99 (315)
                      +++|+|.+|++.|.+...|.+|+++|+++++            |.|.+|++.|...+.|.+|++.|+
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKP------------YKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCC------------EECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCC------------cCCCCCcchhCCHHHHHHHHHHhc
Confidence            3566666666666666666666666665554            556666666666666666666654

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=5e-12  Score=100.95  Aligned_cols=59  Identities=17%  Similarity=0.259  Sum_probs=41.8

Q ss_pred             CCcc-ccCcCCcccCChHHHHHHhc--------CCccccccCcccCCCchhhHhH-HhhhccCcccccC
Q 021252            9 SSKV-WCYYCDREFDDEKILVQHQK--------AKHFKCHVCHKKLSTAGGMAIH-VLQVHKENVTKVP   67 (315)
Q Consensus         9 ~eK~-~C~~CgK~F~~~s~Lk~H~r--------eKPfkC~~CgktF~~~~~L~rH-~r~hh~ekp~~cp   67 (315)
                      +++. .|.+|++.|.++..|++|++        +++|+|.+|+++|.++..|.+| +++|.++++|.|.
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~   83 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLT   83 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEE
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            4443 47778877777777777763        4677777777777777777777 6777777764444

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.21  E-value=8.9e-12  Score=86.60  Aligned_cols=55  Identities=9%  Similarity=0.139  Sum_probs=34.3

Q ss_pred             ccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      +|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|...+.|.+|+++|+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRP------------YHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCC------------EECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCC------------ccCCCCCchhcCHHHHHHHHHHhccc
Confidence            45666666666666666666666655544            55666666666666666666666554

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=9.8e-12  Score=91.05  Aligned_cols=54  Identities=31%  Similarity=0.541  Sum_probs=49.6

Q ss_pred             CC-ccccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCc
Q 021252            9 SS-KVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus         9 ~e-K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      ++ .|.|.+|++.|.+...|++|++    +++|+|.+|++.|.++..|.+|+++|+++.
T Consensus        11 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           11 GEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            44 4569999999999999999998    899999999999999999999999998775

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=6.9e-12  Score=97.81  Aligned_cols=55  Identities=20%  Similarity=0.434  Sum_probs=50.8

Q ss_pred             CccccCcCCcccC-ChHHHHHHhc-----CCccccccCcccCCCchhhHhHHhhhccCccc
Q 021252           10 SKVWCYYCDREFD-DEKILVQHQK-----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVT   64 (315)
Q Consensus        10 eK~~C~~CgK~F~-~~s~Lk~H~r-----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~   64 (315)
                      +.|.|.+|++.|. ...+|++|++     +++|+|.+|++.|.++..|++|++.||++++.
T Consensus        23 ~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A           23 GEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             SCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            3466999999999 9999999988     68999999999999999999999999999873

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.20  E-value=8.2e-12  Score=86.79  Aligned_cols=51  Identities=18%  Similarity=0.466  Sum_probs=48.4

Q ss_pred             cccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCc
Q 021252           12 VWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      |.|.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|+++|++++
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            679999999999999999998    899999999999999999999999998875

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.19  E-value=9.2e-12  Score=86.52  Aligned_cols=50  Identities=26%  Similarity=0.532  Sum_probs=46.2

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhcc
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~   60 (315)
                      .|.|.+|++.|.+...|++|++    +++|+|.+|++.|.++..|.+|++.||+
T Consensus         4 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            4 SRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             -CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            4679999999999999999998    8999999999999999999999999874

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.19  E-value=1.3e-11  Score=95.40  Aligned_cols=51  Identities=22%  Similarity=0.503  Sum_probs=46.4

Q ss_pred             CccccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhcc
Q 021252           10 SKVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (315)
Q Consensus        10 eK~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~   60 (315)
                      +.|.|.+|+|.|.++.+|++|++    +|+|+|.+|+++|.++.+|.+|++..|.
T Consensus        27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           27 ECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             TTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence            34669999999999999999998    8999999999999999999999866554

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.3e-11  Score=91.41  Aligned_cols=58  Identities=17%  Similarity=0.231  Sum_probs=45.8

Q ss_pred             cCCccccccCcccCCCchhhHhHHhhhcc---CcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhh-hcCC
Q 021252           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHK---ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGE-EEEE  101 (315)
Q Consensus        32 reKPfkC~~CgktF~~~~~L~rH~r~hh~---ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~-h~~e  101 (315)
                      .+|+|+|.+|++.|.++..|.+|++.|++   +++            |.|.+|++.|...+.|.+|++. |.++
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~------------~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            4 GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALR------------FPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCC------------EECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcc------------cCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            37888888888888888888888888876   443            8888888888888888888855 4443

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=7e-12  Score=92.88  Aligned_cols=58  Identities=24%  Similarity=0.453  Sum_probs=38.6

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~  100 (315)
                      +++|+|.+|++.|.++..|.+|++.+|.++          .+.|.|.+|++.|.....|.+|++.++.
T Consensus        13 ~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~----------~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A           13 EKPYECYICHARFTQSGTMKMHILQKHTEN----------VAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCSEECTTTCCEESCHHHHHHHHHHHSSSS----------CSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCCeECCCcCchhCCHHHHHHHHHHhcCCC----------CCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            677777777777777777777776444321          0126777777777777777777776543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=2.3e-11  Score=85.47  Aligned_cols=56  Identities=16%  Similarity=0.237  Sum_probs=39.3

Q ss_pred             CccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHH-hhhcCC
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHY-GEEEEE  101 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~-r~h~~e  101 (315)
                      |+|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|...+.|.+|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKP------------YPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCS------------EECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCC------------ccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            467777777777777777777777666654            66777777777777777775 455543

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.14  E-value=3.8e-11  Score=91.80  Aligned_cols=70  Identities=13%  Similarity=-0.020  Sum_probs=53.5

Q ss_pred             CccccccCcccCCCchhhHhHHhh-hccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHVLQ-VHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~r~-hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      ..|.|.+|++.|.+...|.+|++. |.++++..+..|..    |.|.+|++.|.....|++|+++|.++++++|.
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~----~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW----EECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCC----TTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceec----cCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            356788899999999999999887 55554433223322    88888999999999999999999888888874

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.13  E-value=2.5e-10  Score=87.21  Aligned_cols=57  Identities=19%  Similarity=0.165  Sum_probs=51.3

Q ss_pred             ccccCcCCcccCChHHHHHHhc-----CCc--------cccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           11 KVWCYYCDREFDDEKILVQHQK-----AKH--------FKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r-----eKP--------fkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      ++.|.+|++.|....+|++|++     +++        |+|.+|++.|.++..|.+|+++|+++++|+|.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3459999999999999999987     555        99999999999999999999999999987764

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=1.7e-11  Score=97.83  Aligned_cols=64  Identities=17%  Similarity=0.160  Sum_probs=57.5

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhc----cCcccccCCCCCCCCccccccCCCCCCCHHHHHHH-HhhhcCCCCcccc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVH----KENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAH-YGEEEEEVPSKMA  107 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh----~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H-~r~h~~e~p~k~~  107 (315)
                      |++|+|.+|++.|.++..|.+|++.+|    +++            .|.|.+||+.|...+.|++| +++|.++++++|.
T Consensus        16 ekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ek------------pf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~   83 (102)
T 2ghf_A           16 EGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNS------------SYVCVECNFLTKRYDALSEHNLKYHPGEENFKLT   83 (102)
T ss_dssp             CSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSC------------CEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEE
T ss_pred             CcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCC------------CcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            899999999999999999999998534    344            39999999999999999999 8999999999887


Q ss_pred             c
Q 021252          108 K  108 (315)
Q Consensus       108 k  108 (315)
                      .
T Consensus        84 ~   84 (102)
T 2ghf_A           84 M   84 (102)
T ss_dssp             E
T ss_pred             c
Confidence            5

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=3.1e-11  Score=86.44  Aligned_cols=56  Identities=16%  Similarity=0.263  Sum_probs=43.1

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhc--cCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVH--KENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh--~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~  100 (315)
                      +++|+|.+|++.|.+...|.+|++.+|  ++++            |.|.+|++.|...+.|++|++.|++
T Consensus         8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~------------~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV------------YPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCC------------EECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CcceECCCCcchhCCHHHHHHHHHHHcCCCCcC------------eECCCCCCccCCHHHHHHHHHHHcC
Confidence            778888888888888888888887744  3443            7778888888888888888887764

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.12  E-value=9.3e-11  Score=91.39  Aligned_cols=69  Identities=22%  Similarity=0.276  Sum_probs=63.0

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccccccCCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTS  112 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~k~~~~  112 (315)
                      +++|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|.....|.+|+++|.++.+++|...+..
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   82 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTDERP------------YTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKG   82 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCC------------CBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCC
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCCCCC------------cCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCc
Confidence            7899999999999999999999999988875            8899999999999999999999999999988876654


Q ss_pred             C
Q 021252          113 F  113 (315)
Q Consensus       113 ~  113 (315)
                      -
T Consensus        83 f   83 (106)
T 2ee8_A           83 F   83 (106)
T ss_dssp             C
T ss_pred             c
Confidence            3

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=5.6e-11  Score=87.94  Aligned_cols=54  Identities=20%  Similarity=0.519  Sum_probs=48.2

Q ss_pred             CCc-cccCcCCcccCChHHHHHHhc------CCccccccCcccCCCchhhHhHHhhhccCc
Q 021252            9 SSK-VWCYYCDREFDDEKILVQHQK------AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus         9 ~eK-~~C~~CgK~F~~~s~Lk~H~r------eKPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      +++ |.|.+|++.|.+..+|++|++      +++|+|.+|++.|.++..|.+|++.+|+..
T Consensus        12 ~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A           12 GEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             CCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            444 569999999999999999985      379999999999999999999999988754

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.10  E-value=6.6e-11  Score=90.45  Aligned_cols=68  Identities=18%  Similarity=0.193  Sum_probs=62.0

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccccccCCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTS  112 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~k~~~~  112 (315)
                      +++|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|.....|.+|+++|.++.+++|......
T Consensus         6 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   73 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKP------------YKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYA   73 (96)
T ss_dssp             CCCCCBTTTTBCCCCHHHHHHHGGGCCCCCS------------EECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCE
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHhcCCCCC------------EeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCc
Confidence            7899999999999999999999999888775            8899999999999999999999999998888776543

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.10  E-value=2.9e-11  Score=88.31  Aligned_cols=55  Identities=15%  Similarity=0.256  Sum_probs=44.8

Q ss_pred             CCccccc--cCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhc
Q 021252           33 AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE   99 (315)
Q Consensus        33 eKPfkC~--~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~   99 (315)
                      +++|+|.  .|++.|.++..|.+|++.|+++++            |.|.+|++.|...+.|.+|+++|+
T Consensus        17 ~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           17 MRPYACPVESCDRRFSRSDELTRHIRIHTGQKP------------FQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCEECSSTTBCCEESSHHHHHHHHHHHHCCCC------------EECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCccCCcCCCCCCccCCHHHHHHHHHhhCCCCC------------eECCCCCchhCCHHHHHHHHHhcC
Confidence            7888886  488888888888888888877765            778888888888888888887763

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.09  E-value=3.2e-11  Score=86.40  Aligned_cols=50  Identities=26%  Similarity=0.561  Sum_probs=46.4

Q ss_pred             ccccCcCCcccCChHHHHHHhc------CCccccccCcccCCCchhhHhHHhhhcc
Q 021252           11 KVWCYYCDREFDDEKILVQHQK------AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r------eKPfkC~~CgktF~~~~~L~rH~r~hh~   60 (315)
                      .|.|.+|++.|.+..+|++|++      +++|+|.+|++.|.+++.|.+|++.+|+
T Consensus        10 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           10 TYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            4569999999999999999976      6899999999999999999999999986

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=8.1e-11  Score=87.13  Aligned_cols=52  Identities=25%  Similarity=0.450  Sum_probs=46.6

Q ss_pred             ccccCcCCcccCChHHHHHHhc-------CCccccccCcccCCCchhhHhHHhhhccCc
Q 021252           11 KVWCYYCDREFDDEKILVQHQK-------AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r-------eKPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      .|.|.+|++.|.+...|++|++       +++|+|.+|++.|.++..|.+|++.+|.+.
T Consensus         7 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            7 GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            4569999999999999999988       479999999999999999999997777543

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.06  E-value=1.5e-10  Score=85.40  Aligned_cols=66  Identities=12%  Similarity=0.041  Sum_probs=58.8

Q ss_pred             CCcccccc--CcccCCCchhhHhHHh-hhccCcccccCCCCCCCCcccccc--CCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           33 AKHFKCHV--CHKKLSTAGGMAIHVL-QVHKENVTKVPNAKPGRESTDIEI--YGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        33 eKPfkC~~--CgktF~~~~~L~rH~r-~hh~ekp~~cp~~~~grr~~~C~~--Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +++|.|..  |++.|.++..|.+|++ .|.++++            |.|.+  |++.|.....|++|+++|+++++++|.
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~------------~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   72 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS------------FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   72 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCC------------EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCC------------eECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCC
Confidence            68899997  9999999999999998 5777765            78887  999999999999999999999998887


Q ss_pred             ccC
Q 021252          108 KVD  110 (315)
Q Consensus       108 k~~  110 (315)
                      ..+
T Consensus        73 ~C~   75 (79)
T 2dlk_A           73 FSG   75 (79)
T ss_dssp             SSS
T ss_pred             CCC
Confidence            654

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.06  E-value=1e-10  Score=82.08  Aligned_cols=50  Identities=22%  Similarity=0.575  Sum_probs=45.1

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhcc
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~   60 (315)
                      .|.|.+|++.|.....|.+|++    +++|+|.+|++.|.++..|.+|++..|.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~   55 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS   55 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence            3679999999999999999998    8899999999999999999999754443

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.06  E-value=1.5e-10  Score=88.34  Aligned_cols=68  Identities=15%  Similarity=0.219  Sum_probs=60.8

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCC--CCccccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEE--VPSKMAKVD  110 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e--~p~k~~k~~  110 (315)
                      +++|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|.....|.+|++.|+++  .+++|...+
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~   72 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHLNRHKLSHSGEKP------------YSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCG   72 (95)
T ss_dssp             CSCEECSSSCCEESSSHHHHHHHHHSCSSCS------------EECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSC
T ss_pred             CCCeECCCCCCccCChHHHHHHHHhcCCCCC------------CcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCcc
Confidence            6899999999999999999999999888775            88999999999999999999999987  778877655


Q ss_pred             CC
Q 021252          111 TS  112 (315)
Q Consensus       111 ~~  112 (315)
                      ..
T Consensus        73 ~~   74 (95)
T 2yt9_A           73 KG   74 (95)
T ss_dssp             CC
T ss_pred             ch
Confidence            43

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.05  E-value=1.4e-10  Score=90.86  Aligned_cols=51  Identities=27%  Similarity=0.465  Sum_probs=45.7

Q ss_pred             ccccCcCCccc-CChHHHHHHhc---CCccccccCcccCCCchhhHhH-HhhhccC
Q 021252           11 KVWCYYCDREF-DDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIH-VLQVHKE   61 (315)
Q Consensus        11 K~~C~~CgK~F-~~~s~Lk~H~r---eKPfkC~~CgktF~~~~~L~rH-~r~hh~e   61 (315)
                      .|.|.+|+|.| ....+|+.|++   +++|+|.+|++.|.++..|++| +++|.++
T Consensus        34 ~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           34 SVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            46799999999 99999999998   8999999999999999999999 6655443

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.02  E-value=1.4e-10  Score=88.00  Aligned_cols=56  Identities=20%  Similarity=0.326  Sum_probs=52.5

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~  100 (315)
                      ||+|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|...+.|.+|++.|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~------------~~C~~C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKP------------FACDICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCC------------EECTTTCCEESSHHHHHHHHHHHTH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCC------------ccCCCCCCccCCHHHHHHHHHHhCC
Confidence            6899999999999999999999999998876            8899999999999999999999874

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.02  E-value=1.8e-10  Score=85.20  Aligned_cols=65  Identities=17%  Similarity=0.251  Sum_probs=59.3

Q ss_pred             ccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccccccCC
Q 021252           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDT  111 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~k~~~  111 (315)
                      +|+|.+|++.|.+...|.+|++.|+++++            |.|..|++.|.....|.+|++.|.++.+++|...+.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   65 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRP------------YPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGK   65 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCC------------EECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSC
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCC------------eeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcch
Confidence            68999999999999999999999988875            889999999999999999999999999888876543

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.4e-11  Score=97.71  Aligned_cols=78  Identities=14%  Similarity=0.101  Sum_probs=64.9

Q ss_pred             hHHHHHHhc----CCccccccCcccCCCchhhHhHHhh--hccCcccccCCCCCCCCccccccCCCCC--CCHHHHHHHH
Q 021252           24 EKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQ--VHKENVTKVPNAKPGRESTDIEIYGMQG--IPPDVLAAHY   95 (315)
Q Consensus        24 ~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~--hh~ekp~~cp~~~~grr~~~C~~Cgk~F--~~~s~L~~H~   95 (315)
                      .+.|++|++    +++|+|.+|++.|.++..|.+|++.  |++++.           .+.|.+|++.|  .....|++|+
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~-----------~~~C~~C~~~f~f~~~~~l~~H~   72 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDN-----------HETDNNNPKRWSKPRKRSLLEME   72 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSC-----------CCCCCCCCSCCSSCCCCCCCCCC
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCC-----------CccCCCCCcccccccHHHHHHHh
Confidence            345677777    8999999999999999999999987  444332           25689999999  8999999999


Q ss_pred             hhhcCCCCccccccCCC
Q 021252           96 GEEEEEVPSKMAKVDTS  112 (315)
Q Consensus        96 r~h~~e~p~k~~k~~~~  112 (315)
                      ++|.++++++|...+..
T Consensus        73 ~~H~~~~~~~C~~C~k~   89 (115)
T 2dmi_A           73 GKEDAQKVLKCMYCGHS   89 (115)
T ss_dssp             CSCCCCSSCBCSSSCCB
T ss_pred             hccCCCcceECCCCCCc
Confidence            99999999988876654

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.01  E-value=1.7e-10  Score=90.60  Aligned_cols=69  Identities=13%  Similarity=0.097  Sum_probs=61.9

Q ss_pred             HhcCCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccccc
Q 021252           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKV  109 (315)
Q Consensus        30 H~reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~k~  109 (315)
                      |..+++|+| +|++.|.+...|.+|++.|+++++            |.|.+|++.|.....|.+|+++|.++.+++|...
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   71 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRP------------YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNIC   71 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCS------------EECTTTSCEESSSHHHHHHHTTTCCCCCEECSSS
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcC------------ccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCC
Confidence            334899999 999999999999999999988775            8899999999999999999999999998888766


Q ss_pred             CC
Q 021252          110 DT  111 (315)
Q Consensus       110 ~~  111 (315)
                      ..
T Consensus        72 ~~   73 (110)
T 2csh_A           72 AK   73 (110)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=98.99  E-value=2.7e-10  Score=85.84  Aligned_cols=67  Identities=16%  Similarity=0.263  Sum_probs=59.9

Q ss_pred             CCccccc--cCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccccccC
Q 021252           33 AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVD  110 (315)
Q Consensus        33 eKPfkC~--~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~k~~  110 (315)
                      +++|+|.  .|++.|.+...|.+|++.|+++++            |.|.+|++.|.....|.+|+++|.++.+++|...+
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   69 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKP------------FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG   69 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCC------------EECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTC
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCC------------ccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCC
Confidence            6899998  599999999999999999988875            88999999999999999999999999988887654


Q ss_pred             C
Q 021252          111 T  111 (315)
Q Consensus       111 ~  111 (315)
                      .
T Consensus        70 ~   70 (90)
T 1a1h_A           70 R   70 (90)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.97  E-value=3.8e-10  Score=82.23  Aligned_cols=48  Identities=27%  Similarity=0.631  Sum_probs=44.4

Q ss_pred             ccccC--cCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhh
Q 021252           11 KVWCY--YCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQV   58 (315)
Q Consensus        11 K~~C~--~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~h   58 (315)
                      .|.|.  .|++.|.....|++|++    +++|+|.+|++.|.+++.|.+|+++|
T Consensus        19 ~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           19 PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             ccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            45697  59999999999999998    89999999999999999999999876

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=3.3e-10  Score=81.65  Aligned_cols=49  Identities=20%  Similarity=0.339  Sum_probs=32.9

Q ss_pred             cccCcCCcccCChHHHHHHhc---CCccccc-cCcccCCCchhhHhHHhhhccC
Q 021252           12 VWCYYCDREFDDEKILVQHQK---AKHFKCH-VCHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r---eKPfkC~-~CgktF~~~~~L~rH~r~hh~e   61 (315)
                      |.|.+|++.|. ..+|++|++   +++|+|. +|++.|.+++.|.+|+++|..+
T Consensus        11 ~~C~~C~k~f~-~~~L~~H~~~~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A           11 QPCTYCTKEFV-FDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             EECSSSCCEEE-HHHHHHHHHHCSSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             eeccccCCccC-HHHHHHHHHHcCCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            34777777777 777777766   6677777 6777777777777776655443

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.7e-10  Score=83.15  Aligned_cols=56  Identities=14%  Similarity=0.229  Sum_probs=51.0

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccc-cCCCCCCCHHHHHHHHhhhcCCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE-IYGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~-~Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      +|+|+|.+|++.|. +..|.+|+++ +++++            |.|. .|++.|...+.|++|+++|....
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p------------~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLP------------VACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CSSSE------------EECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cCCcC------------ccCCcccCcccccHHHHHHHHHhhcccC
Confidence            78999999999999 9999999988 87776            8888 99999999999999999987654

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.95  E-value=4.5e-10  Score=90.80  Aligned_cols=52  Identities=25%  Similarity=0.419  Sum_probs=48.8

Q ss_pred             ccccCcCCcccCChHHHHHHhc--CCccccccCcccCCCchhhHhHHhhhccCc
Q 021252           11 KVWCYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r--eKPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      .|.|.+|++.|.+..+|++|++  +++|+|.+|++.|.++..|.+|++.||++.
T Consensus        74 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           74 QFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             CeECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            4569999999999999999999  899999999999999999999999999864

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=3.3e-11  Score=87.20  Aligned_cols=57  Identities=14%  Similarity=0.212  Sum_probs=48.0

Q ss_pred             CCc-cccCcCCcccCChHHHHHHhcCCccccccCcccCCCchhhHhHHhhhccCcccccCC
Q 021252            9 SSK-VWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (315)
Q Consensus         9 ~eK-~~C~~CgK~F~~~s~Lk~H~reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~   68 (315)
                      +++ |.|.+|++.|.....|.+   +++|+|.+|++.|.+...|.+|+++|+++++|.|..
T Consensus        15 ~~~~~~C~~C~k~f~~~~~l~~---~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   72 (73)
T 2ctu_A           15 GDRSQKCSKCGIIFIRRSTLSR---RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSS   72 (73)
T ss_dssp             CCSEEECSSSCCEEECCCCCCC---SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCC
T ss_pred             CCCCeeCCcccchhCCHHHhCc---CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCC
Confidence            444 469999999999888876   889999999999999999999999998888755543

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.93  E-value=6.5e-10  Score=87.09  Aligned_cols=56  Identities=18%  Similarity=0.409  Sum_probs=49.9

Q ss_pred             ccccCcCCcccCChHHHHHHhc---CCccccccCcccCCCchhhHhHHh-hhccCccccc
Q 021252           11 KVWCYYCDREFDDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVL-QVHKENVTKV   66 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r---eKPfkC~~CgktF~~~~~L~rH~r-~hh~ekp~~c   66 (315)
                      .|.|.+|++.|.....|++|++   +++|+|.+|++.|.++..|.+|++ .|.++++|.+
T Consensus        42 ~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           42 AAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             SBCCTTTCCCBSSHHHHHHHHHHCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCC
T ss_pred             CccCCCCCCccCCHHHHHHHHHcCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            4679999999999999999988   899999999999999999999997 6667776544

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.90  E-value=6.1e-10  Score=81.06  Aligned_cols=54  Identities=15%  Similarity=0.125  Sum_probs=29.6

Q ss_pred             CCcccccc--CcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccc--cCCCCCCCHHHHHHHHhhh
Q 021252           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE--IYGMQGIPPDVLAAHYGEE   98 (315)
Q Consensus        33 eKPfkC~~--CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~--~Cgk~F~~~s~L~~H~r~h   98 (315)
                      +++|+|.+  |++.|.+...|.+|++.|+++++            |.|.  .|++.|.....|++|+++|
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~------------~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKP------------FSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCS------------EECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCC------------ccCCCCCCCcccCCHHHHHhHhhcC
Confidence            45555555  55555555555555555555544            4443  2555555555555555443

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.86  E-value=1.4e-09  Score=79.09  Aligned_cols=49  Identities=18%  Similarity=0.460  Sum_probs=44.4

Q ss_pred             CccccCc--CCcccCChHHHHHHhc----CCcccccc--CcccCCCchhhHhHHhhh
Q 021252           10 SKVWCYY--CDREFDDEKILVQHQK----AKHFKCHV--CHKKLSTAGGMAIHVLQV   58 (315)
Q Consensus        10 eK~~C~~--CgK~F~~~s~Lk~H~r----eKPfkC~~--CgktF~~~~~L~rH~r~h   58 (315)
                      +.|.|.+  |++.|.+...|++|++    +++|+|.+  |++.|.++..|.+|+++|
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3567998  9999999999999998    89999975  999999999999998764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=98.86  E-value=1.6e-09  Score=89.98  Aligned_cols=57  Identities=25%  Similarity=0.343  Sum_probs=53.7

Q ss_pred             cccCcCCcccCChHHHHHHhc----CCcccccc--CcccCCCchhhHhHHhhhccCcccccCC
Q 021252           12 VWCYYCDREFDDEKILVQHQK----AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~--CgktF~~~~~L~rH~r~hh~ekp~~cp~   68 (315)
                      +.|.+|++.|.....|.+|++    +++|+|.+  |++.|.+...|.+|+++|+++++|.|..
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  125 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEF  125 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSS
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCC
Confidence            569999999999999999998    89999998  9999999999999999999999999985

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.83  E-value=3.4e-09  Score=81.25  Aligned_cols=68  Identities=16%  Similarity=0.212  Sum_probs=60.5

Q ss_pred             CCcccccc--CcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccc--cCCCCCCCHHHHHHHHhhhcCCCCccccc
Q 021252           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE--IYGMQGIPPDVLAAHYGEEEEEVPSKMAK  108 (315)
Q Consensus        33 eKPfkC~~--CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~--~Cgk~F~~~s~L~~H~r~h~~e~p~k~~k  108 (315)
                      ++.|.|.+  |++.|.+...|.+|++.|+++++            |.|.  .|++.|.....|.+|+++|.++.+++|..
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   80 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKP------------YKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGV   80 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCC------------EECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSS
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCC------------eeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCC
Confidence            68899997  99999999999999999988876            6774  69999999999999999999999998877


Q ss_pred             cCCC
Q 021252          109 VDTS  112 (315)
Q Consensus       109 ~~~~  112 (315)
                      ....
T Consensus        81 C~~~   84 (100)
T 2ebt_A           81 CNRS   84 (100)
T ss_dssp             SCCB
T ss_pred             CcCc
Confidence            6543

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.79  E-value=3.8e-09  Score=79.24  Aligned_cols=67  Identities=19%  Similarity=0.298  Sum_probs=59.5

Q ss_pred             CCcccccc--CcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccc--cCCCCCCCHHHHHHHHhhhcCCCCccccc
Q 021252           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE--IYGMQGIPPDVLAAHYGEEEEEVPSKMAK  108 (315)
Q Consensus        33 eKPfkC~~--CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~--~Cgk~F~~~s~L~~H~r~h~~e~p~k~~k  108 (315)
                      .+.|.|.+  |++.|.+...|.+|++.|+++++            |.|.  .|++.|.....|.+|++.|.++.+++|..
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   70 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKP------------YHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK   70 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCC------------EECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSS
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCC------------cCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCC
Confidence            56899999  99999999999999999888776            7775  69999999999999999999999888876


Q ss_pred             cCC
Q 021252          109 VDT  111 (315)
Q Consensus       109 ~~~  111 (315)
                      .+.
T Consensus        71 C~~   73 (89)
T 2wbs_A           71 CDR   73 (89)
T ss_dssp             SSC
T ss_pred             CCc
Confidence            543

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.76  E-value=4.5e-09  Score=77.86  Aligned_cols=54  Identities=13%  Similarity=0.188  Sum_probs=50.4

Q ss_pred             cccc--ccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCcccccc--CCCCCCCHHHHHHHHhhhcC
Q 021252           35 HFKC--HVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI--YGMQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        35 PfkC--~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~--Cgk~F~~~s~L~~H~r~h~~  100 (315)
                      +|+|  .+|++.|.+...|.+|++.|+++++            |.|.+  |++.|.....|++|+++|.+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLP------------YECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCC------------EECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCC------------eeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            6899  9999999999999999999998876            78877  99999999999999999987

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=5.8e-11  Score=85.92  Aligned_cols=65  Identities=15%  Similarity=0.127  Sum_probs=56.2

Q ss_pred             hHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhc
Q 021252           24 EKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE   99 (315)
Q Consensus        24 ~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~   99 (315)
                      +..|.+|++    +++|+|.+|++.|.+...|.+       +++            |.|.+|++.|.....|.+|+++|+
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~------------~~C~~C~~~f~~~~~l~~H~~~H~   63 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKT------------PMCEKCRKDSCQEAALNKDEGNES   63 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSS------------CCCHHHHHTCSCCCSSCCCSSCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCC------------CCCCCCChhhcCHHHHHHHHHhhc
Confidence            345667776    899999999999999999986       333            899999999999999999999999


Q ss_pred             CCCCcccc
Q 021252          100 EEVPSKMA  107 (315)
Q Consensus       100 ~e~p~k~~  107 (315)
                      ++++++|.
T Consensus        64 ~~~~~~C~   71 (73)
T 2ctu_A           64 GKKTSGPS   71 (73)
T ss_dssp             CCCCSSCC
T ss_pred             CCCCCCCC
Confidence            99888775

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=7e-09  Score=71.77  Aligned_cols=42  Identities=17%  Similarity=0.278  Sum_probs=24.9

Q ss_pred             CCccccccCcccCCCchhhHhHHh-hhccCcccccCCCCCCCCccccccCCCCCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVL-QVHKENVTKVPNAKPGRESTDIEIYGMQGI   86 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r-~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~   86 (315)
                      +++|+|.+|++.|.++..|.+|++ +|.++++            |.|.+|++.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~------------~~C~~C~k~F~   52 (54)
T 2eps_A           10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERP------------HKCQVWVSGPS   52 (54)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCC------------CCSSSSCCSSC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhcCCCCC------------ccCCCCCCCCC
Confidence            556666666666666666666654 4545543            55556666554

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.69  E-value=7.4e-09  Score=68.87  Aligned_cols=36  Identities=19%  Similarity=0.314  Sum_probs=29.7

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~   68 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emk_A           10 EKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            788899999999999999999988888888755543

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.68  E-value=2.4e-09  Score=74.08  Aligned_cols=50  Identities=14%  Similarity=0.014  Sum_probs=28.5

Q ss_pred             ccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCc
Q 021252           43 KKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (315)
Q Consensus        43 ktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~  104 (315)
                      |.|.+...|..|++.|.++++            |.|.+|++.|...+.|.+|+++|.+++++
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQP------------ATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCC------------EECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCC------------ccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            455555556666555555544            55555566666666666666666555543

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.68  E-value=8.6e-09  Score=68.43  Aligned_cols=35  Identities=23%  Similarity=0.349  Sum_probs=28.7

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++.+|.+|+++|+++++|+|.
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em0_A           10 EKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSS
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCC
Confidence            78888888888888888888888888888775554

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=8.3e-09  Score=68.39  Aligned_cols=36  Identities=22%  Similarity=0.303  Sum_probs=29.2

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~   68 (315)
                      +++|+|.+|++.|.++.+|.+|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eq4_A           10 EKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred             CCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence            788888888888888888888888888888755543

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=9.3e-09  Score=68.26  Aligned_cols=35  Identities=23%  Similarity=0.319  Sum_probs=28.6

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++.+|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytn_A           10 KKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCC
T ss_pred             CcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCC
Confidence            78888888888888888888888888888774443

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.66  E-value=1.3e-08  Score=67.64  Aligned_cols=39  Identities=23%  Similarity=0.334  Sum_probs=31.8

Q ss_pred             HhcCCccccccCcccCCCchhhHhHHhhhccCcccccCC
Q 021252           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (315)
Q Consensus        30 H~reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~   68 (315)
                      |..+++|+|.+|++.|.++..|.+|+++|+++++|+|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ely_A            7 GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred             CCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            333889999999999999999999999988888755543

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=8.9e-09  Score=68.23  Aligned_cols=35  Identities=23%  Similarity=0.331  Sum_probs=28.6

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++.+|.+|+++|+++++|+|.
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eop_A           10 EKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCC
T ss_pred             CCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            78888888888888888888888888888775544

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=1e-08  Score=67.88  Aligned_cols=36  Identities=22%  Similarity=0.333  Sum_probs=29.2

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~   68 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|..
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A           10 EKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            788888888888888888888888888887755543

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=1.4e-08  Score=67.55  Aligned_cols=37  Identities=19%  Similarity=0.287  Sum_probs=29.7

Q ss_pred             cCCccccccCcccCCCchhhHhHHhhhccCcccccCC
Q 021252           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (315)
Q Consensus        32 reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~   68 (315)
                      .+++|+|.+|++.|.++.+|.+|+++|+++++|+|..
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2elz_A            9 VEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS   45 (46)
T ss_dssp             CCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCC
T ss_pred             CCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3788888888888888888888888888888755543

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=1.1e-08  Score=67.97  Aligned_cols=36  Identities=22%  Similarity=0.433  Sum_probs=29.6

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~   68 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|.|..
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoq_A           10 EKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSS   45 (46)
T ss_dssp             SCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred             CCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            788899999999999999999988888888755543

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=8.2e-09  Score=68.53  Aligned_cols=36  Identities=19%  Similarity=0.398  Sum_probs=29.0

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~   68 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eml_A           10 EKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred             CCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence            788888888888888888888888888887755543

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=5.8e-09  Score=69.37  Aligned_cols=36  Identities=14%  Similarity=0.384  Sum_probs=29.1

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~   68 (315)
                      +++|+|.+|++.|.+++.|.+|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoo_A           10 ERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS   45 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSC
T ss_pred             CCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            788888888888888888888888888887755443

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=8.3e-09  Score=68.48  Aligned_cols=35  Identities=20%  Similarity=0.319  Sum_probs=29.1

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emy_A           10 ENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS   44 (46)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSS
T ss_pred             CcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCC
Confidence            78888888888888888888888888888875554

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1e-08  Score=67.90  Aligned_cols=36  Identities=25%  Similarity=0.376  Sum_probs=29.1

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~   68 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytr_A           10 EKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCC
T ss_pred             CcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            788888888888888888888888888887755443

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.2e-08  Score=67.70  Aligned_cols=39  Identities=23%  Similarity=0.271  Sum_probs=30.4

Q ss_pred             HhcCCccccccCcccCCCchhhHhHHhhhccCcccccCC
Q 021252           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (315)
Q Consensus        30 H~reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~   68 (315)
                      |..+++|+|.+|++.|.++.+|++|+++|+++++|+|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epz_A            7 GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence            333788888888888888888888888888888755543

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.3e-08  Score=67.57  Aligned_cols=38  Identities=21%  Similarity=0.327  Sum_probs=29.7

Q ss_pred             HhcCCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        30 H~reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      |..+++|+|.+|++.|.++.+|.+|++.|+++++|+|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytq_A            7 GAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS   44 (46)
T ss_dssp             SSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCC
T ss_pred             cCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCC
Confidence            33378888888888888888888888888888775544

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=8.8e-09  Score=68.24  Aligned_cols=35  Identities=20%  Similarity=0.292  Sum_probs=28.4

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|.|.
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoe_A           10 EKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS   44 (46)
T ss_dssp             CCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSC
T ss_pred             CCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            78888888888888888888888888888775444

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=9e-09  Score=68.20  Aligned_cols=36  Identities=17%  Similarity=0.269  Sum_probs=29.1

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~   68 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emm_A           10 ERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSC
T ss_pred             CCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            788888888888888888888888888887755543

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=9.1e-09  Score=68.30  Aligned_cols=36  Identities=19%  Similarity=0.305  Sum_probs=29.7

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~   68 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2yu8_A           10 EKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS   45 (46)
T ss_dssp             CSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCC
T ss_pred             CCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            788899999999999999999988888888755543

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.63  E-value=2.9e-08  Score=68.60  Aligned_cols=38  Identities=26%  Similarity=0.437  Sum_probs=34.2

Q ss_pred             ccccCcCCcccCChHHHHHHhc-----CCccccccCcccCCCc
Q 021252           11 KVWCYYCDREFDDEKILVQHQK-----AKHFKCHVCHKKLSTA   48 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r-----eKPfkC~~CgktF~~~   48 (315)
                      .|.|.+|++.|.+..+|++|++     +++|+|.+|++.|.++
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~~   54 (54)
T 2eps_A           12 PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG   54 (54)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCCC
Confidence            4569999999999999999974     8999999999999863

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.63  E-value=9.9e-09  Score=68.12  Aligned_cols=35  Identities=23%  Similarity=0.366  Sum_probs=28.8

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ema_A           10 EKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS   44 (46)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSS
T ss_pred             CcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            78888888888888888888888888888875443

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.63  E-value=8.6e-09  Score=68.30  Aligned_cols=35  Identities=17%  Similarity=0.308  Sum_probs=27.9

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.+++.|.+|+++|+++++|+|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2el4_A           10 VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS   44 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCT
T ss_pred             CCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            78888888888888888888888888888775443

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.5e-08  Score=67.43  Aligned_cols=38  Identities=16%  Similarity=0.232  Sum_probs=30.4

Q ss_pred             HhcCCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        30 H~reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      |..+++|+|.+|++.|.++..|.+|+++|+++++|+|.
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytm_A            7 GTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS   44 (46)
T ss_dssp             CSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            33378889999999999999999998888888875544

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.63  E-value=9.6e-09  Score=69.14  Aligned_cols=31  Identities=23%  Similarity=0.368  Sum_probs=21.5

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp   63 (315)
                      +++|+|.+|++.|.+...|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (48)
T 2epr_A           10 RKQVACEICGKIFRDVYHLNRHKLSHSGEKP   40 (48)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            5667777777777777777777766666665

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=9e-09  Score=68.31  Aligned_cols=36  Identities=22%  Similarity=0.288  Sum_probs=30.3

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~   68 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|..
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytg_A           10 EKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            888999999999999999999998888888755543

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=8e-09  Score=68.46  Aligned_cols=36  Identities=17%  Similarity=0.290  Sum_probs=29.0

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~   68 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eme_A           10 EKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCC
T ss_pred             CCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            788888888888888888888888888887755543

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1e-08  Score=68.10  Aligned_cols=35  Identities=20%  Similarity=0.361  Sum_probs=28.7

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emp_A           10 VKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCC
T ss_pred             CcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            78888888888888888888888888888875544

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=9.8e-09  Score=68.13  Aligned_cols=35  Identities=17%  Similarity=0.329  Sum_probs=28.9

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++.+|.+|+++|+++++|+|.
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emh_A           10 ERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSC
T ss_pred             CCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            78888888888888888888888888888875443

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.63  E-value=1.2e-08  Score=67.56  Aligned_cols=38  Identities=21%  Similarity=0.351  Sum_probs=30.5

Q ss_pred             HhcCCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        30 H~reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      |..+|+|+|.+|++.|.++.+|.+|+++|+++++|.|+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~   42 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGP   42 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCc
Confidence            44478899999999999999999999888888874443

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=1.3e-08  Score=66.92  Aligned_cols=35  Identities=23%  Similarity=0.414  Sum_probs=28.6

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++.+|.+|+++|+++++|.|.
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (44)
T 2emx_A            8 EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS   42 (44)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            78888888888888888888888888888775444

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.2e-08  Score=67.75  Aligned_cols=38  Identities=21%  Similarity=0.395  Sum_probs=30.1

Q ss_pred             HhcCCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        30 H~reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      |..+++|+|.+|++.|.++..|.+|+++|+++++|+|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emf_A            7 GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCC
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            33378899999999999999999998888888874443

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=9.3e-09  Score=68.14  Aligned_cols=35  Identities=20%  Similarity=0.319  Sum_probs=28.0

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.+...|.+|+++|+++++|+|.
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en8_A           10 EKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS   44 (46)
T ss_dssp             CSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCS
T ss_pred             CCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            78888888888888888888888888888775544

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.62  E-value=1.5e-08  Score=70.03  Aligned_cols=47  Identities=9%  Similarity=0.133  Sum_probs=41.7

Q ss_pred             CcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccCccc
Q 021252           18 DREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVT   64 (315)
Q Consensus        18 gK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~   64 (315)
                      +|.|.....|..|++    +++|+|.+|++.|.+.+.|.+|+++|+++++|
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            467888888887777    89999999999999999999999999998864

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=1.3e-08  Score=67.49  Aligned_cols=36  Identities=19%  Similarity=0.309  Sum_probs=28.8

Q ss_pred             cCCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        32 reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      .+++|+|.+|++.|.++..|.+|+++|+++++|+|.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em7_A            9 GEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTT
T ss_pred             CCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            378888888888888888888888888888775544

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.62  E-value=1.1e-08  Score=67.75  Aligned_cols=35  Identities=20%  Similarity=0.281  Sum_probs=28.6

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em9_A           10 EKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTT
T ss_pred             CcCeECCccccccCChHHHHHHHHHhCCCCCCCCC
Confidence            78888888888888888888888888888775544

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.1e-08  Score=67.75  Aligned_cols=35  Identities=17%  Similarity=0.269  Sum_probs=29.2

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epw_A           10 EKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCC
T ss_pred             CCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            78889999999999999999998888888875544

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.1e-08  Score=67.81  Aligned_cols=35  Identities=17%  Similarity=0.212  Sum_probs=28.7

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytd_A           10 EKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSS
T ss_pred             CcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCC
Confidence            78888888888888888888888888888775554

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=1e-08  Score=68.16  Aligned_cols=36  Identities=17%  Similarity=0.309  Sum_probs=28.4

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~   68 (315)
                      +++|+|.+|++.|.++.+|.+|+++|+++++|+|..
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em5_A           10 TKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCC
T ss_pred             CCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            788888888888888888888888888887755443

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=1.1e-08  Score=67.97  Aligned_cols=35  Identities=20%  Similarity=0.292  Sum_probs=28.2

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.+++.|.+|+++|+++++|+|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ene_A           10 EKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCC
T ss_pred             CCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCC
Confidence            78888888888888888888888888887775444

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=1e-08  Score=67.99  Aligned_cols=35  Identities=29%  Similarity=0.434  Sum_probs=27.9

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|.
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq0_A           10 EKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS   44 (46)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCS
T ss_pred             CCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            78888888888888888888888888887774443

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=1.2e-08  Score=67.68  Aligned_cols=35  Identities=17%  Similarity=0.412  Sum_probs=28.5

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|++.|+++++|+|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep2_A           10 EKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            78888888888888888888888888888775544

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=1.3e-08  Score=67.59  Aligned_cols=35  Identities=17%  Similarity=0.296  Sum_probs=28.6

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++++|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytj_A           10 EKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCS
T ss_pred             CcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            78888888888888888888888888888775443

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=1.4e-08  Score=67.44  Aligned_cols=35  Identities=20%  Similarity=0.317  Sum_probs=28.8

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|++.|+++++|.|.
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytk_A           10 EKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS   44 (46)
T ss_dssp             SCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCC
T ss_pred             CCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCC
Confidence            78888888888888888888888888888874443

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.60  E-value=1.4e-08  Score=67.41  Aligned_cols=35  Identities=20%  Similarity=0.367  Sum_probs=27.8

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++.+|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2el6_A           10 VNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS   44 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            77888888888888888888888888887775444

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.3e-08  Score=67.52  Aligned_cols=35  Identities=23%  Similarity=0.383  Sum_probs=28.0

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|.|.
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en1_A           10 EKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCC
T ss_pred             CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            78888888888888888888888888887775544

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=2.1e-08  Score=66.35  Aligned_cols=35  Identities=20%  Similarity=0.346  Sum_probs=29.0

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++.+|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A           10 EKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             CCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            78888888888888888888888888888876553

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.5e-08  Score=67.25  Aligned_cols=35  Identities=17%  Similarity=0.324  Sum_probs=28.0

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A           10 EKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            78888888888888888888888888888775443

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=1.9e-08  Score=66.69  Aligned_cols=35  Identities=26%  Similarity=0.307  Sum_probs=28.1

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|++.|+++++|+|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2enc_A           10 EKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSC
T ss_pred             CCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCC
Confidence            78888888888888888888888888888775443

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.4e-08  Score=67.39  Aligned_cols=35  Identities=20%  Similarity=0.321  Sum_probs=28.1

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|.|.
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en6_A           10 EKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS   44 (46)
T ss_dssp             SCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSC
T ss_pred             CcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCC
Confidence            78888888888888888888888888888775443

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=2e-08  Score=66.74  Aligned_cols=36  Identities=19%  Similarity=0.300  Sum_probs=28.7

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~   68 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em8_A           10 EKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCC
T ss_pred             CCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            788888888888888888888888888887755443

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=2.2e-08  Score=66.44  Aligned_cols=35  Identities=23%  Similarity=0.371  Sum_probs=28.7

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A           10 GKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             SCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            78888888888888888888888888888775553

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=2.2e-08  Score=66.51  Aligned_cols=36  Identities=19%  Similarity=0.365  Sum_probs=27.9

Q ss_pred             cCCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        32 reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      .+++|+|.+|++.|.++.+|.+|+++|+++++|+|.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytt_A            9 GEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS   44 (46)
T ss_dssp             CCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCC
T ss_pred             CCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            377888888888888888888888888887775444

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=1.9e-08  Score=66.65  Aligned_cols=35  Identities=20%  Similarity=0.301  Sum_probs=28.5

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A           10 EKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            78888888888888888888888888888775554

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=2.1e-08  Score=66.53  Aligned_cols=36  Identities=11%  Similarity=0.166  Sum_probs=28.7

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~   68 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|..
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yso_A           10 EKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSS   45 (46)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred             CCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            788888888888888888888888888887755543

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=1.5e-08  Score=67.25  Aligned_cols=35  Identities=20%  Similarity=0.321  Sum_probs=27.7

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ysp_A           10 EKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS   44 (46)
T ss_dssp             CCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCS
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCC
Confidence            78888888888888888888888888777775444

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=2.1e-08  Score=65.67  Aligned_cols=34  Identities=21%  Similarity=0.341  Sum_probs=26.8

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCccccc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~c   66 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A           10 MKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            7788888888888888888888877777777555

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.57  E-value=2.1e-08  Score=65.12  Aligned_cols=35  Identities=14%  Similarity=0.265  Sum_probs=28.5

Q ss_pred             cCCccccccCcccCCCchhhHhHHhhhccCccccc
Q 021252           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (315)
Q Consensus        32 reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~c   66 (315)
                      .+++|+|.+|++.|.++.+|.+|+++|+++++|.|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            7 GENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            37888888888888888888888888888877655

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=2.7e-08  Score=66.04  Aligned_cols=36  Identities=19%  Similarity=0.342  Sum_probs=28.9

Q ss_pred             cCCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        32 reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      .+++|+|.+|++.|.++.+|.+|+++|+++++|+|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            9 GKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            378888888888888888888888888888776654

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=2.3e-08  Score=66.33  Aligned_cols=35  Identities=23%  Similarity=0.322  Sum_probs=28.4

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A           10 EKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            78888888888888888888888888888775553

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.55  E-value=1.9e-08  Score=66.78  Aligned_cols=35  Identities=26%  Similarity=0.380  Sum_probs=29.2

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|.
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A           10 EKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            78888888888888888888888888888876554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=2.8e-08  Score=65.98  Aligned_cols=35  Identities=20%  Similarity=0.363  Sum_probs=28.5

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A           10 EKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             SSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            78888888888888888888888888888775553

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=3.4e-08  Score=65.55  Aligned_cols=36  Identities=17%  Similarity=0.221  Sum_probs=29.8

Q ss_pred             cCCccccccCcccCCCchhhHhHHh-hhccCcccccC
Q 021252           32 KAKHFKCHVCHKKLSTAGGMAIHVL-QVHKENVTKVP   67 (315)
Q Consensus        32 reKPfkC~~CgktF~~~~~L~rH~r-~hh~ekp~~cp   67 (315)
                      .+++|+|.+|++.|.++..|.+|++ +|.++++|+|.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~   45 (47)
T 2epx_A            9 GKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS   45 (47)
T ss_dssp             CCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCC
T ss_pred             CCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCC
Confidence            3888999999999999999999998 88888875544

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=2.4e-08  Score=66.18  Aligned_cols=35  Identities=20%  Similarity=0.400  Sum_probs=28.5

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A           10 EKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            78888888888888888888888888888775553

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=2.9e-08  Score=65.82  Aligned_cols=35  Identities=20%  Similarity=0.305  Sum_probs=28.7

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A           10 ENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            78888888888888888888888888888875553

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=2.7e-08  Score=66.13  Aligned_cols=38  Identities=21%  Similarity=0.335  Sum_probs=30.7

Q ss_pred             HhcCCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        30 H~reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      |..+++|+|.+|++.|.++..|.+|+++|+++++|.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            7 GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            33378889999999999999999998888888876554

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=2.5e-08  Score=66.20  Aligned_cols=35  Identities=26%  Similarity=0.433  Sum_probs=28.4

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A           10 EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            78888888888888888888888888888775553

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=1.8e-08  Score=66.96  Aligned_cols=35  Identities=17%  Similarity=0.403  Sum_probs=28.6

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|.|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A           10 ERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            78888888888888888888888888888876554

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=1.6e-08  Score=67.13  Aligned_cols=35  Identities=20%  Similarity=0.430  Sum_probs=29.0

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A           10 EKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            78888888888888888888888888888876654

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=3.5e-08  Score=63.91  Aligned_cols=35  Identities=14%  Similarity=0.269  Sum_probs=27.9

Q ss_pred             cCCccccccCcccCCCchhhHhHHhhhccCccccc
Q 021252           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (315)
Q Consensus        32 reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~c   66 (315)
                      .+++|+|.+|++.|.+++.|.+|+++|+++++|.|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            7 GEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            37888888888888888888888888888777554

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=2.2e-08  Score=64.85  Aligned_cols=34  Identities=21%  Similarity=0.473  Sum_probs=28.1

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCccccc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~c   66 (315)
                      +++|+|.+|++.|.++.+|.+|+++|+++++|.|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            9 EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            7888888888888888888888888888877554

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=2.8e-08  Score=65.89  Aligned_cols=38  Identities=24%  Similarity=0.442  Sum_probs=28.2

Q ss_pred             HhcCCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        30 H~reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      |..+++|+|.+|++.|.++..|.+|++.|+++++|+|.
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep0_A            7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             STTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCC
T ss_pred             CCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCC
Confidence            33377888888888888888888888887777764443

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=2.7e-08  Score=66.07  Aligned_cols=36  Identities=17%  Similarity=0.307  Sum_probs=29.7

Q ss_pred             cCCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        32 reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      .+++|+|.+|++.|.++..|.+|+++|+++++|+|.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            9 GQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            378888888888888888888888888888876654

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=3.6e-08  Score=65.41  Aligned_cols=38  Identities=21%  Similarity=0.358  Sum_probs=31.2

Q ss_pred             HhcCCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        30 H~reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      |..+++|+|.+|++.|.++..|.+|+++|+++++|+|.
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            7 GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            33388899999999999999999999888888876654

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=2.2e-08  Score=66.38  Aligned_cols=35  Identities=23%  Similarity=0.421  Sum_probs=29.0

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++.+|.+|+++|+++++|.|.
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A           10 EKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            78888888888888888888888888888875553

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=2.1e-08  Score=66.56  Aligned_cols=35  Identities=26%  Similarity=0.460  Sum_probs=28.7

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A           10 EKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            78888888888888888888888888888876553

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=3.1e-08  Score=65.73  Aligned_cols=35  Identities=23%  Similarity=0.456  Sum_probs=28.6

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A           10 KKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            78888888888888888888888888888875553

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=2.2e-08  Score=66.28  Aligned_cols=35  Identities=26%  Similarity=0.453  Sum_probs=28.6

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A           10 EKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            78888888888888888888888888888875553

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=2.5e-08  Score=66.18  Aligned_cols=35  Identities=23%  Similarity=0.411  Sum_probs=28.7

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++.+|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A           10 ERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            78888888888888888888888888888875553

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.1e-08  Score=66.39  Aligned_cols=35  Identities=23%  Similarity=0.445  Sum_probs=28.7

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++.+|.+|+++|+++++|+|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A           10 EKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            78888888888888888888888888888876554

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.9e-08  Score=65.81  Aligned_cols=35  Identities=17%  Similarity=0.404  Sum_probs=28.9

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|.
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A           10 ERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            78888888888888888888888888888875553

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.4e-08  Score=65.36  Aligned_cols=34  Identities=21%  Similarity=0.442  Sum_probs=27.3

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCccccc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~c   66 (315)
                      +++|+|.+|++.|.++.+|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A           10 EKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            7788888888888888888888888877777555

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.4e-08  Score=66.12  Aligned_cols=35  Identities=17%  Similarity=0.252  Sum_probs=28.4

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++.+|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A           10 EKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            78888888888888888888888888888775553

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.2e-08  Score=66.37  Aligned_cols=35  Identities=17%  Similarity=0.336  Sum_probs=29.4

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A           10 EKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             CCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            78888888888888888888888888888876654

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=3.5e-08  Score=65.52  Aligned_cols=35  Identities=26%  Similarity=0.347  Sum_probs=28.5

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|++.|+++++|+|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A           10 EKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            78888888888888888888888888888775443

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.5e-08  Score=66.04  Aligned_cols=35  Identities=17%  Similarity=0.272  Sum_probs=28.9

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|.|+
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A           10 EKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            78888888888888888888888888888875553

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.3e-08  Score=66.14  Aligned_cols=35  Identities=17%  Similarity=0.332  Sum_probs=28.2

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++.+|.+|+++|+++++|+|.
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A           10 EKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            78888888888888888888888888888775553

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=2.8e-08  Score=65.25  Aligned_cols=34  Identities=15%  Similarity=0.320  Sum_probs=28.2

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCccccc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~c   66 (315)
                      +++|+|.+|++.|.++..|.+|++.|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A           10 ENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            7888888888888888888888888888877555

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=2.8e-08  Score=65.10  Aligned_cols=34  Identities=15%  Similarity=0.269  Sum_probs=26.8

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCccccc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~c   66 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|+|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A           10 ENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            7788888888888888888888887777777555

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=3.7e-08  Score=63.99  Aligned_cols=34  Identities=12%  Similarity=0.302  Sum_probs=27.1

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCccccc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~c   66 (315)
                      +++|+|.+|++.|.+++.|.+|++.|+++++|+|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            9 EKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            7788888888888888888888888877776554

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=5.7e-08  Score=63.82  Aligned_cols=34  Identities=15%  Similarity=0.158  Sum_probs=28.0

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCccccc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~c   66 (315)
                      +++|+|.+|++.|.+..+|.+|+++|+++++|+|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A           10 KTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            7888888888888888888888888888877655

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.49  E-value=3.8e-08  Score=63.69  Aligned_cols=34  Identities=18%  Similarity=0.424  Sum_probs=27.1

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCccccc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~c   66 (315)
                      +++|+|.+|++.|.++++|.+|+++|+++++|+|
T Consensus         9 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            9 ETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            7788888888888888888888888887777554

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=3.7e-08  Score=64.67  Aligned_cols=34  Identities=12%  Similarity=0.269  Sum_probs=27.2

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCccccc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~c   66 (315)
                      +++|+|.+|++.|.+...|.+|+++|+++++|+|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A           10 RKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            7788888888888888888888888877777555

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=3.6e-08  Score=63.92  Aligned_cols=34  Identities=21%  Similarity=0.408  Sum_probs=26.9

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCccccc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~c   66 (315)
                      +++|+|.+|+++|.++..|.+|+++|+++++|.|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            9 EKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             SCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            7788888888888888888888888877777544

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=3.2e-08  Score=65.48  Aligned_cols=35  Identities=17%  Similarity=0.353  Sum_probs=27.6

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A           10 EKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            77888888888888888888888887777775553

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.46  E-value=1e-07  Score=62.52  Aligned_cols=38  Identities=21%  Similarity=0.413  Sum_probs=31.1

Q ss_pred             HhcCCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        30 H~reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      |..+++|+|.+|++.|.++.+|.+|+++|+++++|+|.
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            33478899999999999999999999888888876553

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.46  E-value=1.3e-07  Score=63.43  Aligned_cols=33  Identities=24%  Similarity=0.384  Sum_probs=30.7

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCccccccCcc
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHK   43 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~Cgk   43 (315)
                      .|.|.+|++.|.+..+|++|++    +++|+|.+|+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            4569999999999999999998    89999999986

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=9.6e-08  Score=63.43  Aligned_cols=38  Identities=16%  Similarity=0.187  Sum_probs=30.7

Q ss_pred             HhcCCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        30 H~reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      |..+++|+|.+|++.|.++.+|.+|+++|+++++|+|.
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            7 GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            33378899999999999999999999888888875553

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=5.8e-08  Score=64.40  Aligned_cols=35  Identities=23%  Similarity=0.339  Sum_probs=29.9

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhcc-CcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHK-ENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~-ekp~~cp   67 (315)
                      +++|+|.+|++.|.++..|.+|+++|++ +++|.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A           10 EKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             SCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            8889999999999999999999988888 8876553

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=3.6e-08  Score=64.70  Aligned_cols=34  Identities=15%  Similarity=0.291  Sum_probs=29.3

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCccccc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~c   66 (315)
                      +++|+|.+|++.|.+...|.+|+++|+++++|.|
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A           10 SKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            8889999999999999999999988888887555

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=5.9e-08  Score=63.85  Aligned_cols=33  Identities=15%  Similarity=0.238  Sum_probs=25.4

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTK   65 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~   65 (315)
                      +++|+|.+|++.|.+...|.+|+++|+++++|.
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2epv_A           10 EKPYECNECGKAFIWKSLLIVHERTHAGVSGPS   42 (44)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHGGGSSCSCCC
T ss_pred             CcCeECCCCCcccCchHHHHHHHhHhcCCCCCC
Confidence            777888888888888888888887777777644

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=8.2e-08  Score=61.97  Aligned_cols=35  Identities=14%  Similarity=0.365  Sum_probs=27.6

Q ss_pred             cCCccccccCcccCCCchhhHhHHhhhccCccccc
Q 021252           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (315)
Q Consensus        32 reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~c   66 (315)
                      .+++|+|.+|++.|.++..|.+|+++|+++++|.|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            7 GQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            37788888888888888888888888888777554

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=7.7e-08  Score=63.50  Aligned_cols=36  Identities=22%  Similarity=0.381  Sum_probs=28.8

Q ss_pred             cCCccccccCcccCCCchhhHhHHhhhccCcccccC
Q 021252           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        32 reKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      .+++|+|.+|++.|.++.+|.+|+++|+++++|.|+
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            9 GQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             SCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            378888888888888888888888888888776553

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.37  E-value=1.3e-07  Score=60.45  Aligned_cols=33  Identities=12%  Similarity=0.451  Sum_probs=27.9

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTK   65 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~   65 (315)
                      +++|+|.+|++.|.+.++|.+|+++|+++++|.
T Consensus         4 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            4 PRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            688889999999999999999988888887643

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.35  E-value=4.5e-07  Score=59.97  Aligned_cols=33  Identities=18%  Similarity=0.299  Sum_probs=29.7

Q ss_pred             CC-ccccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SS-KVWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~e-K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      ++ .|.|.+|+|.|.+.++|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            9 GEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44 4569999999999999999998    899999988

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=2.9e-08  Score=74.17  Aligned_cols=53  Identities=13%  Similarity=0.069  Sum_probs=25.0

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~  100 (315)
                      +|+++|..|++.| ....|..|+ .+-++++            +.|..|++.|.+ ..|.+|+++|.+
T Consensus        15 ~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~------------~~C~~C~~~~~~-~~l~~H~~~c~~   67 (75)
T 2d9k_A           15 LRLAVCQHCDLEL-SILKLKEHE-DYCGART------------ELCGNCGRNVLV-KDLKTHPEVCGR   67 (75)
T ss_dssp             CCCEECSSSCCEE-CHHHHHHHH-HHHHHCE------------EECSSSCCEEET-TGGGTHHHHBTT
T ss_pred             CcccCCcccChHh-hHHHHHHHH-hHcCCCc------------eEcccCCCcCcH-HHHHHHHHHccC
Confidence            4555555555555 245555554 4444443            444444444432 445555554443

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.33  E-value=5.3e-07  Score=59.62  Aligned_cols=33  Identities=21%  Similarity=0.244  Sum_probs=29.7

Q ss_pred             CCc-cccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SSK-VWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~eK-~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      +++ |.|.+|+|.|.++.+|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            9 VEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444 569999999999999999998    899999988

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.33  E-value=4e-07  Score=59.97  Aligned_cols=32  Identities=13%  Similarity=0.161  Sum_probs=29.7

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCccccccCc
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVCH   42 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~Cg   42 (315)
                      .|.|.+|+|.|.++.+|++|++    +++|.|.+|+
T Consensus        10 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A           10 PYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             SSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            4569999999999999999998    8999999996

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.33  E-value=3e-07  Score=56.91  Aligned_cols=31  Identities=16%  Similarity=0.324  Sum_probs=26.4

Q ss_pred             CccccccCcccCCCchhhHhHHhhhccCccc
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKENVT   64 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~r~hh~ekp~   64 (315)
                      |+|+|.+|++.|.+.++|.+|+++|++++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            5788999999999999999999888888763

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=1.8e-07  Score=62.24  Aligned_cols=35  Identities=17%  Similarity=0.255  Sum_probs=26.3

Q ss_pred             CCccccc--cCcccCCCchhhHhHHhhhccCcccccC
Q 021252           33 AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~--~CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      +++|+|.  +|++.|.++..|.+|+++|+++++|+|.
T Consensus        10 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   46 (48)
T 2ent_A           10 EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS   46 (48)
T ss_dssp             CCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSC
T ss_pred             CCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            7778887  7888888888888888777777764443

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.32  E-value=5.9e-09  Score=74.53  Aligned_cols=39  Identities=21%  Similarity=0.503  Sum_probs=20.4

Q ss_pred             cCcCCcccCChHHHH-HHhcCCccccccCcccCCCchhhH
Q 021252           14 CYYCDREFDDEKILV-QHQKAKHFKCHVCHKKLSTAGGMA   52 (315)
Q Consensus        14 C~~CgK~F~~~s~Lk-~H~reKPfkC~~CgktF~~~~~L~   52 (315)
                      |.+|++.|.....|+ .|..+++|+|.+|++.|.+.+++.
T Consensus        17 C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A           17 CPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             CCCCCchhccHHHhHhhcCCCCCEECCCCCCccccCcccc
Confidence            666666665555554 111155566666665555555443

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=5.4e-07  Score=59.50  Aligned_cols=31  Identities=19%  Similarity=0.156  Sum_probs=28.8

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      .|.|.+|+|.|.+..+|++|++    +++|+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A           12 PYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4569999999999999999998    899999988

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=2.3e-07  Score=60.52  Aligned_cols=42  Identities=10%  Similarity=-0.167  Sum_probs=36.9

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~  106 (315)
                      +|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKP------------YVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSS------------SCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCCCCCcC------------eECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            57777777765            8899999999999999999999999988876

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=5.9e-07  Score=59.29  Aligned_cols=33  Identities=24%  Similarity=0.303  Sum_probs=29.7

Q ss_pred             CC-ccccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SS-KVWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~e-K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      ++ .|.|.+|+|.|.+..+|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            9 GEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44 4569999999999999999998    899999988

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=3.2e-07  Score=59.20  Aligned_cols=41  Identities=7%  Similarity=-0.169  Sum_probs=35.1

Q ss_pred             HHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccc
Q 021252           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (315)
Q Consensus        54 H~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~  106 (315)
                      |+++|.++++            |.|.+|++.|.+.+.|++|+++|.++++++|
T Consensus         1 H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKP------------YSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCS------------CBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCC------------eECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4556666665            8899999999999999999999999888776

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=5.5e-07  Score=59.65  Aligned_cols=33  Identities=21%  Similarity=0.336  Sum_probs=29.6

Q ss_pred             CC-ccccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SS-KVWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~e-K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      ++ .|.|.+|+|.|.+...|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            9 GEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44 4569999999999999999998    899999988

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.30  E-value=3.1e-07  Score=60.77  Aligned_cols=43  Identities=16%  Similarity=-0.017  Sum_probs=37.9

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|++|++.|.+.+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emk_A            2 SSGSSGTGEKP------------YECKECGKAFSQTTHLIQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCS------------CBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCccCCCCc------------eECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            57777777775            88999999999999999999999999988775

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=3e-07  Score=60.73  Aligned_cols=43  Identities=16%  Similarity=-0.039  Sum_probs=37.7

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKP------------YQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCS------------SSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCC------------eECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            57777777765            88999999999999999999999999888774

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=3.1e-07  Score=60.54  Aligned_cols=43  Identities=19%  Similarity=0.006  Sum_probs=37.5

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|...+.|.+|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKP------------YECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCS------------SCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCC------------cCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            57777777765            88999999999999999999999999988774

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=6.1e-07  Score=59.31  Aligned_cols=33  Identities=27%  Similarity=0.347  Sum_probs=29.6

Q ss_pred             CCc-cccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SSK-VWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~eK-~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      +++ |.|.+|+|.|.++.+|++|++    +++|+|..|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            9 GGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444 569999999999999999998    899999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.30  E-value=3.1e-07  Score=60.67  Aligned_cols=43  Identities=16%  Similarity=-0.065  Sum_probs=37.8

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|++|++.|.+.+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em0_A            2 SSGSSGMGEKT------------WKCRECDMCFSQASSLRLHQNVHVGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCC------------CCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSS
T ss_pred             CCcCccCCCcC------------eECCCCCcccCCHHHHHHHHHHcCCCCCcCCC
Confidence            57777777775            88999999999999999999999999988775

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=3.6e-07  Score=60.46  Aligned_cols=43  Identities=12%  Similarity=-0.109  Sum_probs=37.2

Q ss_pred             HHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccccc
Q 021252           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAK  108 (315)
Q Consensus        54 H~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~k  108 (315)
                      |+++|.++++            |.|.+|++.|.+.+.|++|+++|.++++++|..
T Consensus         3 H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKP------------YECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCS------------CCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCcCCCCC------------cCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6667777765            889999999999999999999999999888753

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=2.8e-07  Score=60.89  Aligned_cols=43  Identities=19%  Similarity=0.015  Sum_probs=37.4

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKP------------YKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCS------------CBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCcCCCCCcC------------eECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            46777777765            88999999999999999999999999988775

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.29  E-value=5.7e-07  Score=58.81  Aligned_cols=31  Identities=23%  Similarity=0.394  Sum_probs=28.7

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      .|.|.+|+|.|.+.++|++|++    +++|+|.+|
T Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A           10 PFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4569999999999999999998    899999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=5.7e-07  Score=59.34  Aligned_cols=33  Identities=24%  Similarity=0.279  Sum_probs=29.6

Q ss_pred             CCc-cccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SSK-VWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~eK-~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      +++ |.|.+|+|.|.+..+|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            9 GEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 569999999999999999998    899999988

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=5.6e-07  Score=59.40  Aligned_cols=33  Identities=21%  Similarity=0.309  Sum_probs=29.6

Q ss_pred             CC-ccccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SS-KVWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~e-K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      ++ .|.|.+|+|.|.+.+.|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            9 GEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            44 4569999999999999999998    899999988

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.29  E-value=5.9e-07  Score=59.40  Aligned_cols=31  Identities=23%  Similarity=0.289  Sum_probs=28.7

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      .|.|.+|+|.|.++..|++|++    +++|+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A           12 PFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             SBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4569999999999999999998    899999988

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.29  E-value=6.5e-07  Score=58.99  Aligned_cols=33  Identities=24%  Similarity=0.316  Sum_probs=29.7

Q ss_pred             CCc-cccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SSK-VWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~eK-~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      +++ |.|.+|+|.|.+.+.|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            9 GVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444 569999999999999999998    899999988

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=6.9e-07  Score=59.04  Aligned_cols=33  Identities=21%  Similarity=0.211  Sum_probs=29.7

Q ss_pred             CC-ccccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SS-KVWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~e-K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      ++ .|.|.+|+|.|.+..+|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            9 GEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44 4569999999999999999998    899999988

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=3e-07  Score=60.75  Aligned_cols=43  Identities=21%  Similarity=0.033  Sum_probs=37.3

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKP------------YKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCT------------TCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCcCCCCCcC------------eECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            46777777765            88999999999999999999999999988774

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=7e-07  Score=58.82  Aligned_cols=33  Identities=21%  Similarity=0.328  Sum_probs=29.6

Q ss_pred             CC-ccccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SS-KVWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~e-K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      ++ .|.|.+|+|.|.+...|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            9 GEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44 4569999999999999999998    899999988

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=3.3e-07  Score=60.65  Aligned_cols=43  Identities=19%  Similarity=0.015  Sum_probs=37.7

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|.+.+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKP------------FQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSS------------BCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcC------------CCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            57777777765            88999999999999999999999999988775

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=6.5e-07  Score=59.07  Aligned_cols=33  Identities=21%  Similarity=0.303  Sum_probs=29.6

Q ss_pred             CC-ccccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SS-KVWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~e-K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      ++ .|.|.+|+|.|.+...|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            9 GEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            44 4569999999999999999998    899999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=2.5e-07  Score=61.18  Aligned_cols=43  Identities=14%  Similarity=-0.099  Sum_probs=38.0

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|++|++.|.+.+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytj_A            2 SSGSSGTGEKP------------YICAECGKAFTIRSNLIKHQKIHTKQKPSGPS   44 (46)
T ss_dssp             CSSCTTSSCCS------------EECSSSCCEESSHHHHHHHHHHTSCCCCSSCS
T ss_pred             CcccCCCCCcC------------eECCCCChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            57778877775            89999999999999999999999999888775

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.28  E-value=7.1e-07  Score=58.79  Aligned_cols=33  Identities=21%  Similarity=0.281  Sum_probs=29.6

Q ss_pred             CC-ccccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SS-KVWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~e-K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      ++ .|.|.+|++.|.+...|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            9 GEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44 4569999999999999999998    899999988

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=6.2e-07  Score=59.07  Aligned_cols=33  Identities=24%  Similarity=0.350  Sum_probs=29.6

Q ss_pred             CCc-cccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SSK-VWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~eK-~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      +++ |.|.+|++.|.++.+|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            9 GERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444 569999999999999999998    899999988

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=3.4e-07  Score=60.37  Aligned_cols=43  Identities=16%  Similarity=-0.001  Sum_probs=37.8

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|.+.+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eq4_A            2 SSGSSGTGEKL------------YNCKECGKSFSRAPCLLKHERLHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCC------------CCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCC
T ss_pred             CCcccCCCCCC------------eECCCCCCccCchHHHHHHHHhcCCCCCCCCC
Confidence            57777777775            88999999999999999999999999988775

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=6.3e-07  Score=59.13  Aligned_cols=33  Identities=21%  Similarity=0.246  Sum_probs=29.6

Q ss_pred             CCc-cccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SSK-VWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~eK-~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      +++ |.|.+|+|.|.+..+|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            9 GEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            444 569999999999999999998    899999988

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=3.4e-07  Score=60.49  Aligned_cols=43  Identities=19%  Similarity=0.014  Sum_probs=37.5

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytn_A            2 SSGSSGTGKKP------------YKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSS------------CBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCC
T ss_pred             CCCcCCCCCcC------------eECCCCCCeeCCHHHHHHHhhhcCCCCCCCCC
Confidence            47777777765            88999999999999999999999999988775

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.28  E-value=7.5e-07  Score=58.87  Aligned_cols=33  Identities=21%  Similarity=0.330  Sum_probs=29.7

Q ss_pred             CCc-cccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SSK-VWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~eK-~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      +++ |.|.+|+|.|.++.+|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            9 GVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 569999999999999999998    899999988

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=6.3e-07  Score=59.25  Aligned_cols=33  Identities=18%  Similarity=0.178  Sum_probs=29.6

Q ss_pred             CC-ccccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SS-KVWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~e-K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      ++ .|.|.+|+|.|.+..+|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            9 GEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44 4569999999999999999998    899999988

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=6.8e-07  Score=58.99  Aligned_cols=33  Identities=21%  Similarity=0.254  Sum_probs=29.6

Q ss_pred             CC-ccccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SS-KVWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~e-K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      ++ .|.|.+|+|.|.+..+|++|++    +++|+|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            9 GEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44 4569999999999999999998    899999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=6.9e-07  Score=59.05  Aligned_cols=31  Identities=29%  Similarity=0.296  Sum_probs=28.8

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      .|.|.+|++.|.+..+|++|++    +++|+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A           12 SHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4569999999999999999998    899999988

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=4.2e-07  Score=59.89  Aligned_cols=43  Identities=14%  Similarity=-0.158  Sum_probs=37.7

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|++|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~~~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eov_A            2 SSGSSGTGEKP------------YKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSSCCS------------CBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSC
T ss_pred             CCCCCCCCCCC------------ccCCccChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            57777777765            88999999999999999999999999888775

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=3.4e-07  Score=60.50  Aligned_cols=43  Identities=16%  Similarity=-0.051  Sum_probs=37.5

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|.....|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKP------------YKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCC------------CCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCC------------eECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            47777777765            88999999999999999999999999988774

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=6.8e-07  Score=58.99  Aligned_cols=33  Identities=27%  Similarity=0.456  Sum_probs=29.6

Q ss_pred             CCc-cccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SSK-VWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~eK-~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      +++ |.|.+|+|.|.+..+|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            9 GERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444 569999999999999999998    899999987

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=1.9e-07  Score=60.35  Aligned_cols=42  Identities=14%  Similarity=-0.069  Sum_probs=36.1

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~  106 (315)
                      +|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|
T Consensus         1 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKP------------YRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCS------------BCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCC------------eeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            36677777765            8899999999999999999999999887765

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=5.4e-07  Score=59.49  Aligned_cols=33  Identities=27%  Similarity=0.406  Sum_probs=29.6

Q ss_pred             CCc-cccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SSK-VWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~eK-~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      +++ |.|.+|++.|.+..+|++|++    +++|+|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            9 GEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            444 569999999999999999998    899999988

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.27  E-value=3.2e-07  Score=59.30  Aligned_cols=41  Identities=17%  Similarity=0.006  Sum_probs=35.3

Q ss_pred             HHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccc
Q 021252           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (315)
Q Consensus        54 H~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~  106 (315)
                      |+++|.++++            |.|.+|++.|.+.+.|++|+++|.++++++|
T Consensus         1 H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENP------------YECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCS------------EECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCC------------ccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            4556666665            8999999999999999999999999988876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=3.6e-07  Score=60.35  Aligned_cols=43  Identities=19%  Similarity=0.007  Sum_probs=37.7

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~~~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoq_A            2 SSGSSGTGEKP------------FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSSCS------------CCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCC
T ss_pred             CCCCCCCCCCC------------cCCCcCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            57777777765            88999999999999999999999999988775

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=3.5e-07  Score=60.51  Aligned_cols=43  Identities=16%  Similarity=0.060  Sum_probs=37.4

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|.....|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKC------------YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCC------------CBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCC------------eECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            46777777765            88999999999999999999999999988775

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=2.4e-07  Score=61.19  Aligned_cols=43  Identities=16%  Similarity=-0.062  Sum_probs=37.9

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            2 SSGSSGTGEKP------------YRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSCCCS------------EECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCCC------------eECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            57777777765            89999999999999999999999999988775

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=2.3e-07  Score=61.33  Aligned_cols=43  Identities=16%  Similarity=0.020  Sum_probs=37.6

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~~~------------~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKP------------YECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCS------------EECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcC------------eECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            57777777765            89999999999999999999999999988774

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=6.3e-07  Score=59.14  Aligned_cols=33  Identities=18%  Similarity=0.223  Sum_probs=29.6

Q ss_pred             CC-ccccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SS-KVWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~e-K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      ++ .|.|.+|+|.|.+...|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            9 GEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             SCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            44 4569999999999999999998    899999988

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=2.3e-07  Score=61.41  Aligned_cols=43  Identities=14%  Similarity=-0.111  Sum_probs=37.9

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|++.|.++++            |.|++|++.|.+.+.|.+|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoo_A            2 SSGSSGSGERP------------YGCNECGKNFGRHSHLIEHLKRHFREKSSGPS   44 (46)
T ss_dssp             CCCCCCSCCCC------------EECSSSCCEESSHHHHHHHHHHHHSTTSSCCS
T ss_pred             CCCCCCCCCCC------------EEccccCcccCCHHHHHHHHHHHcCCCCCCCC
Confidence            57777777775            89999999999999999999999999988775

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=3.5e-07  Score=60.41  Aligned_cols=43  Identities=19%  Similarity=-0.082  Sum_probs=37.2

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      .|+++|.++++            |.|.+|++.|.....|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENP------------FICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCS------------CBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCC------------EECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            46677777765            88999999999999999999999999888774

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=3.8e-07  Score=60.15  Aligned_cols=43  Identities=16%  Similarity=-0.043  Sum_probs=37.6

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~~~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eop_A            2 SSGSSGTGEKP------------HECRECGKSFSFNSQLIVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCS------------CBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCC
T ss_pred             CCccccCCCCC------------eeCCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            57777777765            88999999999999999999999999988775

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=7.2e-07  Score=58.86  Aligned_cols=33  Identities=24%  Similarity=0.222  Sum_probs=29.6

Q ss_pred             CCc-cccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SSK-VWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~eK-~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      +++ |.|++|++.|.+...|++|++    +++|+|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            9 REKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444 569999999999999999998    899999988

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=4.4e-07  Score=60.02  Aligned_cols=43  Identities=12%  Similarity=-0.061  Sum_probs=37.3

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~h~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKL------------FKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCC------------CBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCC------------EECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            46667777765            88999999999999999999999999988774

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=2.3e-07  Score=61.42  Aligned_cols=43  Identities=14%  Similarity=0.003  Sum_probs=37.8

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKP------------YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCS------------EEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCC------------eECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            57777777765            89999999999999999999999999988774

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=7.5e-07  Score=58.78  Aligned_cols=33  Identities=18%  Similarity=0.292  Sum_probs=29.6

Q ss_pred             CCc-cccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SSK-VWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~eK-~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      +++ |.|.+|++.|.+...|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            9 GEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            444 569999999999999999998    899999988

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=2.7e-07  Score=60.88  Aligned_cols=43  Identities=19%  Similarity=0.015  Sum_probs=37.6

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKP------------YKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCC------------EECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCC------------eeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            57777777765            89999999999999999999999999988774

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.25  E-value=6.7e-07  Score=59.01  Aligned_cols=33  Identities=21%  Similarity=0.344  Sum_probs=29.7

Q ss_pred             CCc-cccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SSK-VWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~eK-~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      +++ |.|.+|+|.|.+..+|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            9 GEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            454 569999999999999999998    899999988

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.25  E-value=6e-07  Score=59.27  Aligned_cols=31  Identities=23%  Similarity=0.324  Sum_probs=28.7

Q ss_pred             ccccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      .|.|.+|++.|.+...|++|++    +++|+|.+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A           12 PFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4569999999999999999998    899999988

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.25  E-value=3.2e-07  Score=56.85  Aligned_cols=31  Identities=19%  Similarity=0.375  Sum_probs=24.5

Q ss_pred             cCCccccccCcccCCCchhhHhHHhhhccCc
Q 021252           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        32 reKPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      .+++|+|.+|++.|.+++.|.+|++.|++++
T Consensus         4 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            4 GKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            3678888888888888888888887777665

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.25  E-value=3e-07  Score=60.87  Aligned_cols=43  Identities=19%  Similarity=-0.009  Sum_probs=37.4

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKP------------FECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCS------------EECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCC------------EECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            46777777765            89999999999999999999999999988774

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.25  E-value=2.9e-07  Score=60.96  Aligned_cols=43  Identities=14%  Similarity=-0.116  Sum_probs=37.8

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKP------------YKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCC------------EECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCC------------EECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            57777777765            89999999999999999999999999988775

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.25  E-value=2.7e-07  Score=61.06  Aligned_cols=43  Identities=16%  Similarity=-0.024  Sum_probs=37.7

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|.+.+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERH------------YECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCC------------EECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCC------------eECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            47777777765            89999999999999999999999999988774

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.25  E-value=2.9e-07  Score=59.99  Aligned_cols=42  Identities=10%  Similarity=-0.144  Sum_probs=36.7

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~  106 (315)
                      +|+++|.++++            |.|.+|++.|...+.|.+|+++|.++++++|
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKP------------YECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCS------------EECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCC------------eECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            57777777765            8999999999999999999999999988776

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.25  E-value=3.2e-07  Score=60.62  Aligned_cols=43  Identities=16%  Similarity=-0.045  Sum_probs=37.9

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|.+.+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ema_A            2 SSGSSGTGEKR------------YKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CSCSSCTTSCC------------EECSSSCCEESSHHHHHHHHTGGGCCCCCSSS
T ss_pred             CCccCCCCCcC------------cCCCCCcchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            57777777775            89999999999999999999999999988775

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.24  E-value=8.6e-07  Score=58.37  Aligned_cols=33  Identities=24%  Similarity=0.207  Sum_probs=29.6

Q ss_pred             CCc-cccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SSK-VWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~eK-~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      +++ |.|.+|++.|.+...|++|++    +++|+|..|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            9 GEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444 569999999999999999998    899999988

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=3e-07  Score=60.67  Aligned_cols=43  Identities=14%  Similarity=-0.078  Sum_probs=37.5

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|.+.+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKP------------FECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCS------------EECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCC------------cCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            47777777765            89999999999999999999999999988774

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=3.1e-07  Score=60.54  Aligned_cols=43  Identities=19%  Similarity=-0.029  Sum_probs=37.5

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKP------------YICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCS------------EECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCCcC------------EECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            47777777765            89999999999999999999999999988775

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=8.7e-07  Score=58.45  Aligned_cols=33  Identities=24%  Similarity=0.342  Sum_probs=29.6

Q ss_pred             CCc-cccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SSK-VWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~eK-~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      +++ |.|.+|++.|.+..+|++|++    +++|+|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            9 GEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 569999999999999999998    899999988

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=3.5e-07  Score=60.44  Aligned_cols=43  Identities=19%  Similarity=-0.004  Sum_probs=37.8

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|++|++.|.+.+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emy_A            2 SSGSSGTGENP------------YECHECGKAFSRKYQLISHQRTHAGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCC------------EECSSSCCEESSHHHHHHHHHHHTTSCCSCSS
T ss_pred             CCCCCCCCCcC------------cCCCCCCcccCcHHHHHHHHHHcCCCCCCCCC
Confidence            57777777765            89999999999999999999999999988775

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=3.7e-07  Score=60.18  Aligned_cols=43  Identities=16%  Similarity=-0.065  Sum_probs=37.6

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~~~------------~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoe_A            2 SSGSSGTGEKP------------YKCNECGKVFTQNSHLANHQRIHTGVKPSGPS   44 (46)
T ss_dssp             CCSSCCCCCCS------------SEETTTTEECSSHHHHHHHHGGGSCCCSCSSC
T ss_pred             CCCCCCCCCCC------------eECCCcChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            47777777765            89999999999999999999999999988775

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=2.6e-07  Score=60.43  Aligned_cols=42  Identities=10%  Similarity=-0.126  Sum_probs=36.8

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~  106 (315)
                      +|+++|.++++            |.|.+|++.|.+...|++|+++|.++++++|
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            2 SSGSSGAGENP------------FKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSCCCSCCCS------------EECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCccccCCCCC------------eECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            57777777765            8999999999999999999999999988776

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.23  E-value=3.3e-07  Score=60.54  Aligned_cols=43  Identities=14%  Similarity=-0.138  Sum_probs=37.8

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emp_A            2 SSGSSGTGVKP------------YMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCS------------EECSSSCCEESCHHHHHHHHHHHHCCSCCSCC
T ss_pred             CcccccCCCcC------------eECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            57777777765            89999999999999999999999999988775

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.23  E-value=3.9e-07  Score=60.26  Aligned_cols=43  Identities=16%  Similarity=-0.086  Sum_probs=37.5

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|.+.+.|++|+++|.++++++|.
T Consensus         2 ~h~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERP------------FKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCS------------CCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCC------------eECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            46777777765            88999999999999999999999999988875

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.23  E-value=3.2e-07  Score=60.50  Aligned_cols=43  Identities=16%  Similarity=-0.052  Sum_probs=37.5

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|.....|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~~~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKP------------YRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCC------------EECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCC------------eECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            47777777765            89999999999999999999999999988774

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.23  E-value=3.2e-07  Score=60.61  Aligned_cols=43  Identities=19%  Similarity=0.035  Sum_probs=37.8

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep2_A            2 SSGSSGTGEKP------------YECSICGKSFTKKSQLHVHQQIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSCSSCCCS------------EECSSSCCEESSHHHHHHHHHTTSSCCSCCSC
T ss_pred             CCCCCCCCCcC------------cCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            57777777765            89999999999999999999999999988775

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.23  E-value=4e-07  Score=56.15  Aligned_cols=31  Identities=23%  Similarity=0.492  Sum_probs=26.0

Q ss_pred             cCCccccccCcccCCCchhhHhHHhhhccCc
Q 021252           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        32 reKPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      .+++|+|.+|++.|.++.+|.+|++.|++++
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            4 GSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            3788889899999998899999988887765

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=3e-07  Score=60.16  Aligned_cols=42  Identities=7%  Similarity=-0.141  Sum_probs=36.8

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~  106 (315)
                      +|+++|.++++            |.|.+|++.|.....|++|+++|.++++++|
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKR------------YECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSS------------EECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CcccccCCCCC------------eECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            57777777765            8899999999999999999999999988876

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.23  E-value=2.3e-07  Score=61.30  Aligned_cols=43  Identities=19%  Similarity=-0.018  Sum_probs=37.9

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|.....|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKP------------FQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCS------------EECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCC------------eeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            57777777775            89999999999999999999999999988875

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.23  E-value=3.8e-07  Score=60.21  Aligned_cols=43  Identities=19%  Similarity=0.037  Sum_probs=37.3

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      .|+++|.++++            |.|.+|++.|.+.+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~~~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERH------------YECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCC------------EECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCC------------CCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            46777777765            89999999999999999999999999888774

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=4.1e-07  Score=58.90  Aligned_cols=41  Identities=20%  Similarity=0.037  Sum_probs=34.8

Q ss_pred             HHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccc
Q 021252           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (315)
Q Consensus        54 H~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~  106 (315)
                      |+++|.++++            |.|++|++.|...+.|++|+++|.++++++|
T Consensus         2 H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKP------------YPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCC------------BCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCC------------EECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            5566666665            8899999999999999999999999887765

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.23  E-value=8.8e-07  Score=58.33  Aligned_cols=33  Identities=27%  Similarity=0.362  Sum_probs=29.6

Q ss_pred             CCc-cccCcCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SSK-VWCYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~eK-~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      +++ |.|.+|+|.|.+...|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            9 GEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444 569999999999999999998    899999988

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=4.2e-07  Score=60.12  Aligned_cols=43  Identities=14%  Similarity=-0.038  Sum_probs=37.5

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      .|+++|.++++            |.|.+|++.|.+.+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRP------------YECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSS------------EECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcC------------cCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            46777777765            89999999999999999999999999988774

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.22  E-value=4.1e-07  Score=59.39  Aligned_cols=42  Identities=14%  Similarity=-0.061  Sum_probs=36.8

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~  106 (315)
                      .|+++|.++++            |.|.+|++.|.+.+.|++|+++|.++++++|
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            2 SSGSSGTGENP------------YECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CSCCSSSSCCS------------CEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CCccccCCCcC------------eeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            46777777765            8999999999999999999999999988876

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.22  E-value=4.6e-07  Score=59.73  Aligned_cols=43  Identities=16%  Similarity=-0.071  Sum_probs=37.9

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|++|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eme_A            2 SSGSSGSGEKP------------YVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCTTCCCCS------------EECSSSCCEESSHHHHHHHHGGGCCCSCCSSC
T ss_pred             CCCCCCCCCCC------------eECCCCChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            57777777775            89999999999999999999999999888775

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.21  E-value=3.8e-07  Score=60.13  Aligned_cols=43  Identities=21%  Similarity=0.037  Sum_probs=37.3

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      .|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~~~------------~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKP------------YNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCS------------EECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCCcCcCCCcC------------ccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            46777777765            89999999999999999999999999988774

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=4.7e-07  Score=56.77  Aligned_cols=33  Identities=24%  Similarity=0.470  Sum_probs=26.3

Q ss_pred             HhcCCccccccCcccCCCchhhHhHHhhhccCc
Q 021252           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        30 H~reKPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      |..+++|+|.+|++.|.++.+|.+|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            333788888888888888888888888887765

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.21  E-value=4.3e-07  Score=59.96  Aligned_cols=43  Identities=16%  Similarity=0.009  Sum_probs=37.7

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|.+.+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~~~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytk_A            2 SSGSSGSGEKP------------YKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSSCS------------EECSSSCCEESSHHHHHHHHHHHSSSSCSSCC
T ss_pred             CCcccCCCCCC------------EeCCcCCCccCCHHHHHHHHHHHCCCCCCCCC
Confidence            57777777765            89999999999999999999999999988775

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.21  E-value=3.7e-07  Score=58.99  Aligned_cols=41  Identities=20%  Similarity=0.011  Sum_probs=35.1

Q ss_pred             HHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccc
Q 021252           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (315)
Q Consensus        54 H~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~  106 (315)
                      |+++|.++++            |.|+.|++.|.+.+.|++|+++|.++++++|
T Consensus         2 H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKP------------YKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCS------------EECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCC------------EeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            5566666665            8999999999999999999999999988765

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.20  E-value=3.9e-07  Score=60.09  Aligned_cols=43  Identities=14%  Similarity=-0.018  Sum_probs=37.5

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      +|+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKP------------YECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCS------------SEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCC------------eECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            47777777765            89999999999999999999999999888774

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.20  E-value=4.5e-07  Score=59.51  Aligned_cols=42  Identities=12%  Similarity=-0.089  Sum_probs=36.2

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~  106 (315)
                      +|+++|.++++            |.|++|++.|.+.+.|++|+++|.+++++.+
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKP------------YECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCS------------EECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcC------------eECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            47777777775            8999999999999999999999999887654

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.20  E-value=6e-07  Score=59.46  Aligned_cols=42  Identities=17%  Similarity=0.033  Sum_probs=36.3

Q ss_pred             HHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        54 H~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      |+++|.++++            |.|.+|++.|.+...|++|+++|.++++++|.
T Consensus         3 h~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKP------------YKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCS------------CBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcc------------cCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            5566666665            88999999999999999999999999988774

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.19  E-value=5.2e-07  Score=58.17  Aligned_cols=41  Identities=17%  Similarity=-0.054  Sum_probs=34.6

Q ss_pred             HHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccc
Q 021252           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (315)
Q Consensus        54 H~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~  106 (315)
                      |+++|.++++            |.|.+|++.|...+.|++|+++|.++++++|
T Consensus         2 H~~~H~~~~~------------~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETP------------YLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCC------------EECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCC------------eECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            4556666654            8999999999999999999999999888765

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.18  E-value=8.5e-07  Score=58.05  Aligned_cols=41  Identities=10%  Similarity=-0.033  Sum_probs=35.3

Q ss_pred             HHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccc
Q 021252           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (315)
Q Consensus        54 H~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~  106 (315)
                      |+++|.++++            |.|.+|++.|.....|++|+++|.++++++|
T Consensus         3 h~~~h~~~~~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTT------------SECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCC------------CCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcC------------eECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            5556666664            8899999999999999999999999988876

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.17  E-value=6.8e-07  Score=59.07  Aligned_cols=42  Identities=14%  Similarity=-0.003  Sum_probs=36.0

Q ss_pred             HHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        54 H~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      |+++|.++++            |.|.+|++.|.+...|++|+++|.++++++|.
T Consensus         3 h~~~h~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKP------------YECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSS------------CBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCC------------cCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5556666665            89999999999999999999999999988775

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.17  E-value=6.5e-07  Score=52.78  Aligned_cols=30  Identities=17%  Similarity=0.423  Sum_probs=25.0

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      +++|+|.+|++.|.+...|.+|++.|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            578889999999999999999988877653

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.16  E-value=6.9e-07  Score=59.05  Aligned_cols=43  Identities=19%  Similarity=-0.035  Sum_probs=37.0

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      .|+++|.++++            |.|++|++.|.+...|++|+++|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            2 SSGSSGSGEKP------------FKCKECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCS------------EECSSSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCC------------EECCcCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            36666777665            89999999999999999999999999988775

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.16  E-value=8.6e-07  Score=55.50  Aligned_cols=28  Identities=25%  Similarity=0.498  Sum_probs=19.0

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhcc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~   60 (315)
                      +++|+|.+|++.|.++..|.+|++.|++
T Consensus         9 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            9 IKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             SSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            6667777777777777777777666554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.15  E-value=1.6e-07  Score=57.71  Aligned_cols=31  Identities=16%  Similarity=0.367  Sum_probs=27.8

Q ss_pred             CccccccCcccCCCchhhHhHHhhhccCccc
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKENVT   64 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~r~hh~ekp~   64 (315)
                      |+|+|.+|++.|.++++|.+|+++|++++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            6899999999999999999999998888763

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.15  E-value=1.2e-06  Score=65.24  Aligned_cols=52  Identities=21%  Similarity=0.381  Sum_probs=44.7

Q ss_pred             CCcc-ccCcCCcccCChHHHHHHhc---CCccccccCcccCCCchhhHhHHhhhccCc
Q 021252            9 SSKV-WCYYCDREFDDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus         9 ~eK~-~C~~CgK~F~~~s~Lk~H~r---eKPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      +++. .|.+|++.| ...+|..|+.   ++++.|..|++.|. ...|..|++++.+++
T Consensus        14 ~~r~~~C~~C~~~~-~~~~L~~H~~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           14 PLRLAVCQHCDLEL-SILKLKEHEDYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCCEECSSSCCEE-CHHHHHHHHHHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             CCcccCCcccChHh-hHHHHHHHHhHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            4444 599999999 5999999988   99999999999987 499999998877664

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=7.7e-07  Score=58.15  Aligned_cols=29  Identities=14%  Similarity=0.187  Sum_probs=24.7

Q ss_pred             CCcccccc--CcccCCCchhhHhHHhhhccC
Q 021252           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        33 eKPfkC~~--CgktF~~~~~L~rH~r~hh~e   61 (315)
                      ||||+|.+  |+++|.++++|++|+++|+++
T Consensus         7 ekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            7 GILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            78889976  999999999999998888765

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.14  E-value=1.1e-06  Score=65.65  Aligned_cols=36  Identities=8%  Similarity=0.265  Sum_probs=31.5

Q ss_pred             CCcccccc--CcccCCCchhhHhHH-hhhccCcccccCC
Q 021252           33 AKHFKCHV--CHKKLSTAGGMAIHV-LQVHKENVTKVPN   68 (315)
Q Consensus        33 eKPfkC~~--CgktF~~~~~L~rH~-r~hh~ekp~~cp~   68 (315)
                      ||||+|.+  |+|+|.++++|.+|+ ++|.+++++-|-.
T Consensus        25 EKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           25 YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             CCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            99999976  999999999999997 6788999876644

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.13  E-value=2.1e-06  Score=56.02  Aligned_cols=31  Identities=26%  Similarity=0.413  Sum_probs=27.6

Q ss_pred             CccccCcCCcccCChHHHHHHhc----CCcccccc
Q 021252           10 SKVWCYYCDREFDDEKILVQHQK----AKHFKCHV   40 (315)
Q Consensus        10 eK~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~   40 (315)
                      +.|.|.+|++.|.+..+|++|++    +++|+|.+
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            9 GAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            34669999999999999999998    89999974

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.13  E-value=3.4e-08  Score=76.27  Aligned_cols=34  Identities=18%  Similarity=0.434  Sum_probs=28.7

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCccccc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~c   66 (315)
                      +++|+|.+|++.|.+...|.+|+++|+++++|+|
T Consensus        23 ~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C   56 (88)
T 1x6f_A           23 NSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRA   56 (88)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCccc
Confidence            8888898899889888888888888888887544

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.13  E-value=1.2e-06  Score=51.34  Aligned_cols=28  Identities=21%  Similarity=0.502  Sum_probs=22.5

Q ss_pred             CccccccCcccCCCchhhHhHHhhhccC
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~r~hh~e   61 (315)
                      ++|+|.+|++.|.+...|.+|++.|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            5788888888888888888888877665

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.13  E-value=1.2e-06  Score=54.30  Aligned_cols=30  Identities=27%  Similarity=0.530  Sum_probs=24.5

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      +++|+|.+|++.|.++..|.+|+++|++++
T Consensus         7 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            7 GKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            778888888888888888888888877653

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.12  E-value=1.6e-06  Score=50.95  Aligned_cols=29  Identities=17%  Similarity=0.559  Sum_probs=24.9

Q ss_pred             CccccccCcccCCCchhhHhHHhhhccCc
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      ++|+|.+|++.|.+...|.+|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            57889999999999999999998888765

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.12  E-value=1.1e-06  Score=51.65  Aligned_cols=29  Identities=21%  Similarity=0.564  Sum_probs=24.2

Q ss_pred             CccccccCcccCCCchhhHhHHhhhccCc
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      |+|+|.+|++.|.+...|.+|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            57889999999999999999988877653

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.12  E-value=1.5e-06  Score=50.68  Aligned_cols=29  Identities=28%  Similarity=0.544  Sum_probs=24.3

Q ss_pred             CccccccCcccCCCchhhHhHHhhhccCc
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      |+|+|.+|++.|.+...|.+|++.|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            57889999999999999999988887763

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.11  E-value=3.4e-07  Score=59.88  Aligned_cols=42  Identities=7%  Similarity=-0.166  Sum_probs=36.7

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCCCccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~  106 (315)
                      +|+++|.++++            |.|++|++.|.....|++|+++|.++++++|
T Consensus         2 ~H~~~H~~~~~------------~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKS------------YNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCC------------EEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCC------------eECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            46777777765            8999999999999999999999999988876

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.11  E-value=1.7e-06  Score=52.33  Aligned_cols=30  Identities=13%  Similarity=0.360  Sum_probs=25.9

Q ss_pred             CCccccc--cCcccCCCchhhHhHHhhhccCc
Q 021252           33 AKHFKCH--VCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        33 eKPfkC~--~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      +|+|+|.  .|++.|.+...|.+|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            5789998  89999999999999998887763

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=6.5e-07  Score=59.19  Aligned_cols=43  Identities=9%  Similarity=-0.134  Sum_probs=36.8

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcC-CCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE-EVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~-e~p~k~~  107 (315)
                      .|+++|.++++            |.|.+|++.|.+.+.|++|+++|.+ +++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQKEKC------------FKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCC------------EECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCccccCCCCC------------EECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36667777765            8999999999999999999999999 8888764

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.10  E-value=1.2e-06  Score=57.86  Aligned_cols=43  Identities=16%  Similarity=0.015  Sum_probs=37.0

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHh-hhcCCCCcccc
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYG-EEEEEVPSKMA  107 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r-~h~~e~p~k~~  107 (315)
                      .|+++|.++++            |.|.+|++.|...+.|++|++ +|.++++++|.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~   45 (47)
T 2epx_A            2 SSGSSGTGKKP------------YECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS   45 (47)
T ss_dssp             CCCCCCCCCCS------------BCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCC
T ss_pred             ccccccCCCCC------------EECCccCchhCChHHHHHHhHhhcCCCCCCCCC
Confidence            36667777765            889999999999999999999 99999888775

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.10  E-value=5.8e-07  Score=63.96  Aligned_cols=45  Identities=13%  Similarity=0.145  Sum_probs=38.0

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHH
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLA   92 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~   92 (315)
                      +++|+|.+|++.|.+...|.   +.|.++++            |.|.+|++.|...+.+.
T Consensus        12 ~k~~~C~~C~k~F~~~~~l~---~~H~~~k~------------~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A           12 RASFKCPVCSSTFTDLEANQ---LFDPMTGT------------FRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHH---HEETTTTE------------EBCSSSCCBCEECTTCS
T ss_pred             CCCccCCCCCchhccHHHhH---hhcCCCCC------------EECCCCCCccccCcccc
Confidence            89999999999999998886   67878876            88889999997766544

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.09  E-value=2.4e-06  Score=62.64  Aligned_cols=30  Identities=23%  Similarity=0.345  Sum_probs=24.5

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      +|+|+|.+|+|+|.++.+|++|+++|+++.
T Consensus        11 ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A           11 AGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             ccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            788888888888888888888888877764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.09  E-value=1.2e-06  Score=54.39  Aligned_cols=31  Identities=19%  Similarity=0.445  Sum_probs=24.8

Q ss_pred             cCCccccccCcccCCCchhhHhHHhhhccCc
Q 021252           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        32 reKPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      .+++|+|.+|++.|.++..|.+|+++|++++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            6 SGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            3778888888888888888888888777653

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.36  E-value=4.4e-07  Score=53.78  Aligned_cols=30  Identities=23%  Similarity=0.512  Sum_probs=25.5

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      +++|+|.+|++.|.+...|.+|++.|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            578999999999999999999998887653

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.08  E-value=1.2e-06  Score=55.34  Aligned_cols=32  Identities=19%  Similarity=0.353  Sum_probs=27.4

Q ss_pred             CCccccc--cCcccCCCchhhHhHHhhhccCccc
Q 021252           33 AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVT   64 (315)
Q Consensus        33 eKPfkC~--~CgktF~~~~~L~rH~r~hh~ekp~   64 (315)
                      +++|+|.  .|++.|.++++|++|+++|+++++|
T Consensus         4 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            7889999  5999999999999999888888753

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.07  E-value=1.1e-06  Score=54.75  Aligned_cols=29  Identities=21%  Similarity=0.493  Sum_probs=23.4

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~e   61 (315)
                      +++|+|.+|++.|.++..|.+|+++|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            7 GLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            67888888888888888888888777665

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.07  E-value=1.3e-06  Score=54.42  Aligned_cols=30  Identities=23%  Similarity=0.451  Sum_probs=25.0

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      +++|+|.+|++.|.+...|.+|+++|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            7 GKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            788888888888888888888888877653

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.06  E-value=1.3e-06  Score=54.41  Aligned_cols=30  Identities=23%  Similarity=0.501  Sum_probs=24.2

Q ss_pred             cCCccccccCcccCCCchhhHhHHhhhccC
Q 021252           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        32 reKPfkC~~CgktF~~~~~L~rH~r~hh~e   61 (315)
                      .+++|+|.+|++.|.+...|.+|+++|+++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            6 SGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            377888888888888888888888777665

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.06  E-value=2e-06  Score=56.82  Aligned_cols=33  Identities=15%  Similarity=0.038  Sum_probs=30.4

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCCCCcccc
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~~  107 (315)
                      .|.|.+|++.|.+.+.|++|+++|.++++++|.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A           12 GHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             SCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            389999999999999999999999999988874

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.06  E-value=1.6e-06  Score=54.38  Aligned_cols=33  Identities=12%  Similarity=0.278  Sum_probs=26.5

Q ss_pred             HhcCCccccccCcccCCCc-hhhHhHHhhhccCc
Q 021252           30 HQKAKHFKCHVCHKKLSTA-GGMAIHVLQVHKEN   62 (315)
Q Consensus        30 H~reKPfkC~~CgktF~~~-~~L~rH~r~hh~ek   62 (315)
                      |..+++|+|.+|++.|.++ ..|.+|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            3337888999999999988 89999988887653

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.05  E-value=1.2e-06  Score=51.22  Aligned_cols=27  Identities=26%  Similarity=0.488  Sum_probs=22.0

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh   59 (315)
                      |++|+|.+|++.|.+...|.+|++.|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            578888888888888888888887664

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.04  E-value=1.6e-06  Score=50.69  Aligned_cols=29  Identities=28%  Similarity=0.540  Sum_probs=23.2

Q ss_pred             CccccccCcccCCCchhhHhHHhhhccCc
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      ++|+|.+|++.|.+...|.+|++.|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            57888888888888888888888777653

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.03  E-value=4.1e-06  Score=53.74  Aligned_cols=30  Identities=17%  Similarity=0.313  Sum_probs=26.6

Q ss_pred             CC-ccccCcCCcccCChHHHHHHhc----CCcccc
Q 021252            9 SS-KVWCYYCDREFDDEKILVQHQK----AKHFKC   38 (315)
Q Consensus         9 ~e-K~~C~~CgK~F~~~s~Lk~H~r----eKPfkC   38 (315)
                      ++ .|.|.+|++.|.+..+|++|++    +++|+|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            7 GQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            44 4569999999999999999998    899988

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.02  E-value=3.6e-06  Score=55.19  Aligned_cols=32  Identities=28%  Similarity=0.395  Sum_probs=28.0

Q ss_pred             CCc-cccCcCCcccCChHHHHHHhc----CCcccccc
Q 021252            9 SSK-VWCYYCDREFDDEKILVQHQK----AKHFKCHV   40 (315)
Q Consensus         9 ~eK-~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~   40 (315)
                      +++ |.|.+|+|.|.+..+|++|++    +++|+|.+
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            9 GQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             SCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            444 569999999999999999998    89999974

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.28  E-value=6.9e-07  Score=52.79  Aligned_cols=29  Identities=31%  Similarity=0.525  Sum_probs=23.8

Q ss_pred             CccccccCcccCCCchhhHhHHhhhccCc
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      |+|+|.+|++.|.+..+|.+|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            57888888888888888888888877653

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.02  E-value=1.6e-06  Score=50.50  Aligned_cols=26  Identities=23%  Similarity=0.508  Sum_probs=20.9

Q ss_pred             CCccccccCcccCCCchhhHhHHhhh
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQV   58 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~h   58 (315)
                      ||+|+|.+|++.|.+...|.+|++.|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            57788888888888888888887765

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.01  E-value=5.1e-06  Score=54.92  Aligned_cols=33  Identities=21%  Similarity=0.287  Sum_probs=29.3

Q ss_pred             CCc-cccC--cCCcccCChHHHHHHhc----CCccccccC
Q 021252            9 SSK-VWCY--YCDREFDDEKILVQHQK----AKHFKCHVC   41 (315)
Q Consensus         9 ~eK-~~C~--~CgK~F~~~s~Lk~H~r----eKPfkC~~C   41 (315)
                      +++ |.|.  +|++.|.++..|++|++    +++|+|.+|
T Consensus         9 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            9 GEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444 5698  89999999999999998    899999988

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.00  E-value=1.2e-06  Score=51.31  Aligned_cols=26  Identities=19%  Similarity=0.479  Sum_probs=20.9

Q ss_pred             CCccccccCcccCCCchhhHhHHhhh
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQV   58 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~h   58 (315)
                      +|+|+|.+|++.|.+++.|.+|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            57888888888888888888887665

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.00  E-value=2.9e-06  Score=53.01  Aligned_cols=36  Identities=11%  Similarity=-0.187  Sum_probs=31.0

Q ss_pred             HHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        54 H~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      |+++|.++++            |.|..|++.|.....|.+|+++|.++
T Consensus         2 H~~~h~~~k~------------~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKP------------FQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSS------------BCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCC------------ccCCCCCcccCcHHHHHHHHHHhccC
Confidence            6667777765            88999999999999999999999764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.00  E-value=1.5e-06  Score=58.62  Aligned_cols=33  Identities=21%  Similarity=0.544  Sum_probs=24.3

Q ss_pred             HhcCCccccccCcccCCCchhhHhHHh-hhccCc
Q 021252           30 HQKAKHFKCHVCHKKLSTAGGMAIHVL-QVHKEN   62 (315)
Q Consensus        30 H~reKPfkC~~CgktF~~~~~L~rH~r-~hh~ek   62 (315)
                      |..+|+|+|.+|++.|.++.+|.+|++ +|.++.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            444788888888888888888888887 666654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.99  E-value=2.8e-06  Score=51.04  Aligned_cols=29  Identities=21%  Similarity=0.464  Sum_probs=23.0

Q ss_pred             Cccccc--cCcccCCCchhhHhHHhhhccCc
Q 021252           34 KHFKCH--VCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        34 KPfkC~--~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      |+|+|.  +|++.|.+...|.+|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            578887  78888888888888888777653

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.97  E-value=1.7e-06  Score=66.66  Aligned_cols=49  Identities=10%  Similarity=0.119  Sum_probs=39.5

Q ss_pred             CCc-cccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhhccC
Q 021252            9 SSK-VWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus         9 ~eK-~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~hh~e   61 (315)
                      +++ |.|.+|++.|.+..+|++|++    +++|+|..|    .+...|..|.+.|.+.
T Consensus        22 ~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~----~~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           22 QNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQ----ERRKQLLSKQKYADGA   75 (88)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCC----SCCCCCCCCCCCCCCS
T ss_pred             CCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchh----hhHHHHHhhhcccccc
Confidence            444 569999999999999999998    899999765    4567777777776653

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.95  E-value=3.6e-06  Score=48.61  Aligned_cols=26  Identities=15%  Similarity=0.478  Sum_probs=18.9

Q ss_pred             ccccccCcccCCCchhhHhHHhhhcc
Q 021252           35 HFKCHVCHKKLSTAGGMAIHVLQVHK   60 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~r~hh~   60 (315)
                      +|+|.+|++.|.++..|.+|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46777788888777777777776654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.92  E-value=4.2e-06  Score=49.45  Aligned_cols=28  Identities=14%  Similarity=0.360  Sum_probs=22.7

Q ss_pred             CccccccCcccCCCchhhHhH-HhhhccC
Q 021252           34 KHFKCHVCHKKLSTAGGMAIH-VLQVHKE   61 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH-~r~hh~e   61 (315)
                      ++|+|.+|++.|.+.+.|.+| ++.|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            578899999999998999988 6666655

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.92  E-value=2.3e-06  Score=54.01  Aligned_cols=31  Identities=16%  Similarity=0.330  Sum_probs=22.2

Q ss_pred             HhcCCccccccCcccCCCchhhHhH-Hhhhcc
Q 021252           30 HQKAKHFKCHVCHKKLSTAGGMAIH-VLQVHK   60 (315)
Q Consensus        30 H~reKPfkC~~CgktF~~~~~L~rH-~r~hh~   60 (315)
                      |..+|+|+|.+|++.|.++..|.+| ++.|.+
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            3336778888888888888888888 665554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.87  E-value=5e-06  Score=52.37  Aligned_cols=30  Identities=23%  Similarity=0.433  Sum_probs=24.4

Q ss_pred             CCcccccc--CcccCCCchhhHhHHhhhccCc
Q 021252           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        33 eKPfkC~~--CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      +++|+|.+  |++.|.+++.|.+|+++|++++
T Consensus         6 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            6 KKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            78888884  8888888888888888887663

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.86  E-value=4.1e-06  Score=54.11  Aligned_cols=23  Identities=22%  Similarity=0.483  Sum_probs=14.9

Q ss_pred             CCccccccCcccCCCchhhHhHH
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHV   55 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~   55 (315)
                      ||+|+|.+|+|+|.++++|++|+
T Consensus         6 ekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            6 PARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCCEETTTTEECSCHHHHHHHH
T ss_pred             ccCeECCCCCCccCCHhHccCcC
Confidence            56666666666666666666665

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.84  E-value=6.5e-06  Score=51.34  Aligned_cols=28  Identities=14%  Similarity=0.103  Sum_probs=25.8

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCCC
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      .|.|..|++.|...+.|.+|+++|.+++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            9 SYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            3899999999999999999999998875

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.04  E-value=2.5e-06  Score=49.17  Aligned_cols=25  Identities=24%  Similarity=0.553  Sum_probs=19.9

Q ss_pred             CccccccCcccCCCchhhHhHHhhh
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHVLQV   58 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~r~h   58 (315)
                      |+|+|.+|++.|.+.+.|.+|++.|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            5788888888888888888887665

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.79  E-value=2e-05  Score=48.38  Aligned_cols=31  Identities=13%  Similarity=-0.057  Sum_probs=28.2

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCCCCcc
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k  105 (315)
                      .|.|+.|++.|...+.|.+|+++|.+++++.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            4889999999999999999999999988763

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.77  E-value=5.4e-06  Score=55.34  Aligned_cols=30  Identities=20%  Similarity=0.414  Sum_probs=24.2

Q ss_pred             CCccccc--cCcccCCCchhhHhHHhhhccCc
Q 021252           33 AKHFKCH--VCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        33 eKPfkC~--~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      +++|+|.  .|++.|.++++|++|+++|++++
T Consensus        16 ~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             TTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             CCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            8888885  68888888888888888877653

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=97.75  E-value=1.7e-05  Score=50.30  Aligned_cols=33  Identities=9%  Similarity=0.011  Sum_probs=29.5

Q ss_pred             CccccccCCCCCCCHHHHHHHHhhhcCCCCccc
Q 021252           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (315)
Q Consensus        74 r~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~k~  106 (315)
                      +.|.|.+|++.|...+.|.+|+++|.+++++.+
T Consensus         5 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            5 RSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            349999999999999999999999999887754

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.71  E-value=1.6e-05  Score=48.59  Aligned_cols=29  Identities=10%  Similarity=-0.046  Sum_probs=26.2

Q ss_pred             CccccccCCCCCCCHHHHHHHHhhhcCCC
Q 021252           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        74 r~~~C~~Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      +.|.|.+|++.|.+.+.|++|++.|.+++
T Consensus         6 k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            6 SGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            34999999999999999999999998765

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=97.71  E-value=1.8e-05  Score=48.62  Aligned_cols=29  Identities=10%  Similarity=-0.093  Sum_probs=26.2

Q ss_pred             CccccccCCCCCCCHHHHHHHHhhhcCCC
Q 021252           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        74 r~~~C~~Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      +.|.|.+|++.|...+.|.+|+++|.++.
T Consensus         6 k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            6 RPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             cCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            34999999999999999999999998765

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.69  E-value=1.8e-05  Score=51.04  Aligned_cols=30  Identities=23%  Similarity=0.507  Sum_probs=25.4

Q ss_pred             CCCcc-ccCcCCcccCChHHHHHHhcCCcccccc
Q 021252            8 VSSKV-WCYYCDREFDDEKILVQHQKAKHFKCHV   40 (315)
Q Consensus         8 ~~eK~-~C~~CgK~F~~~s~Lk~H~reKPfkC~~   40 (315)
                      .+||. +|.+|||+|.++++|++|+   +|+|.+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~---py~C~~   34 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ---AYYCSH   34 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH---HHTSTT
T ss_pred             CCccCeECCCCCCccCCHhHccCcC---CeECcC
Confidence            35655 5999999999999999998   888864

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.57  E-value=0.00015  Score=54.10  Aligned_cols=50  Identities=14%  Similarity=0.058  Sum_probs=39.1

Q ss_pred             ccCCCCCCCCccccc--cCCCCCCCHHHHHHHH-hhhcCCCCccccccCCCCC
Q 021252           65 KVPNAKPGRESTDIE--IYGMQGIPPDVLAAHY-GEEEEEVPSKMAKVDTSFP  114 (315)
Q Consensus        65 ~cp~~~~grr~~~C~--~Cgk~F~~~s~L~~H~-r~h~~e~p~k~~k~~~~~~  114 (315)
                      .|..-..+.++|.|.  .|++.|.+.+.|.+|+ ++|++++++-|...+....
T Consensus        17 ~~~~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~~~~~~   69 (73)
T 1x3c_A           17 EFPTRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEVEEESG   69 (73)
T ss_dssp             CCSSSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSCCCCCC
T ss_pred             cccccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccccccccc
Confidence            344444455668885  5999999999999997 6899999998887776543

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.57  E-value=2.7e-05  Score=48.17  Aligned_cols=27  Identities=11%  Similarity=-0.160  Sum_probs=24.9

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      .|.|.+|++.|...+.|.+|+++|.++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            9 LYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            499999999999999999999999865

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.56  E-value=5.5e-05  Score=46.52  Aligned_cols=29  Identities=10%  Similarity=0.030  Sum_probs=26.0

Q ss_pred             CccccccCCCCCCCHHHHHHHHhhhcCCC
Q 021252           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        74 r~~~C~~Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      +.|.|.+|++.|.....|.+|+++|.+++
T Consensus         8 ~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            8 KTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             SSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            34999999999999999999999998763

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.55  E-value=2.6e-05  Score=48.54  Aligned_cols=27  Identities=11%  Similarity=-0.030  Sum_probs=24.8

Q ss_pred             ccccccCCCCCCCH-HHHHHHHhhhcCC
Q 021252           75 STDIEIYGMQGIPP-DVLAAHYGEEEEE  101 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~-s~L~~H~r~h~~e  101 (315)
                      .|.|..|++.|... +.|.+|+++|.++
T Consensus         9 ~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            9 AMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            38999999999999 9999999999875

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.54  E-value=2.4e-05  Score=45.56  Aligned_cols=26  Identities=15%  Similarity=0.341  Sum_probs=18.8

Q ss_pred             Cccccc--cCcccCCCchhhHhHHhhhc
Q 021252           34 KHFKCH--VCHKKLSTAGGMAIHVLQVH   59 (315)
Q Consensus        34 KPfkC~--~CgktF~~~~~L~rH~r~hh   59 (315)
                      ++|+|.  .|++.|.+...|.+|+++|+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            467777  77777777777777776654

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.54  E-value=3.5e-05  Score=47.65  Aligned_cols=27  Identities=15%  Similarity=0.128  Sum_probs=25.0

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      .|.|.+|++.|.....|.+|+++|.++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            9 PFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhccC
Confidence            499999999999999999999999875

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.53  E-value=4.1e-05  Score=47.13  Aligned_cols=27  Identities=11%  Similarity=0.027  Sum_probs=25.1

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      .|.|.+|++.|.....|.+|+++|.++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            9 PYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            499999999999999999999999875

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.51  E-value=7.5e-05  Score=43.31  Aligned_cols=27  Identities=22%  Similarity=0.170  Sum_probs=24.9

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      .|.|..|++.|...+.|.+|+++|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            488999999999999999999999875

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.47  E-value=3.2e-05  Score=48.53  Aligned_cols=26  Identities=12%  Similarity=0.054  Sum_probs=23.9

Q ss_pred             cccccCCCCCCCHHHHHHH-HhhhcCC
Q 021252           76 TDIEIYGMQGIPPDVLAAH-YGEEEEE  101 (315)
Q Consensus        76 ~~C~~Cgk~F~~~s~L~~H-~r~h~~e  101 (315)
                      |.|..|++.|...+.|++| ++.|.++
T Consensus        10 ~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A           10 YYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             EECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHHccCc
Confidence            8999999999999999999 8888764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.44  E-value=6.6e-05  Score=48.78  Aligned_cols=28  Identities=11%  Similarity=-0.128  Sum_probs=24.7

Q ss_pred             Ccccccc--CCCCCCCHHHHHHHHhhhcCC
Q 021252           74 ESTDIEI--YGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        74 r~~~C~~--Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      +.|.|..  |++.|.+.+.|++|+++|+++
T Consensus         8 kp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            8 ILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            3488875  999999999999999999875

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.41  E-value=5.3e-05  Score=50.71  Aligned_cols=30  Identities=20%  Similarity=0.165  Sum_probs=24.4

Q ss_pred             ccccccCCCCCCCHHHHHHHHh-hhcCCCCc
Q 021252           75 STDIEIYGMQGIPPDVLAAHYG-EEEEEVPS  104 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r-~h~~e~p~  104 (315)
                      .|.|.+|++.|.+...|.+|++ +|.++...
T Consensus         7 p~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            7 PYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            4999999999999999999999 89876544

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.40  E-value=0.00012  Score=42.60  Aligned_cols=28  Identities=7%  Similarity=0.112  Sum_probs=25.4

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCCC
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      .|.|..|++.|...+.|.+|+++|+++.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            3889999999999999999999998764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.40  E-value=7e-05  Score=43.53  Aligned_cols=27  Identities=15%  Similarity=-0.017  Sum_probs=24.9

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      .|.|..|++.|...+.|.+|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            489999999999999999999999875

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.39  E-value=0.00011  Score=42.44  Aligned_cols=28  Identities=11%  Similarity=-0.122  Sum_probs=25.3

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCCC
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      .|.|..|++.|.....|..|+++|.+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            4889999999999999999999998763

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.39  E-value=0.0001  Score=42.13  Aligned_cols=26  Identities=8%  Similarity=0.041  Sum_probs=23.5

Q ss_pred             cccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           76 TDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        76 ~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      |.|..|++.|...+.|.+|+++|.++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            78999999999999999999998763

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.37  E-value=9.8e-05  Score=45.54  Aligned_cols=28  Identities=18%  Similarity=-0.033  Sum_probs=25.5

Q ss_pred             CccccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        74 r~~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      +.|.|..|++.|.....|.+|+++|.++
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            8 KIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            3499999999999999999999999875

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.35  E-value=3.6e-05  Score=51.21  Aligned_cols=39  Identities=5%  Similarity=-0.148  Sum_probs=31.3

Q ss_pred             HhHHhhhccCcccccCCCCCCCCccccc--cCCCCCCCHHHHHHHHhhhcCCC
Q 021252           52 AIHVLQVHKENVTKVPNAKPGRESTDIE--IYGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        52 ~rH~r~hh~ekp~~cp~~~~grr~~~C~--~Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      ..|...|.++++            |.|.  .|++.|.+.+.|++|+++|.+++
T Consensus         7 ~~~~~~H~~~k~------------~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKT------------FECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTE------------EECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCC------------eECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            344456777776            7785  79999999999999999998763

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.34  E-value=0.00011  Score=42.76  Aligned_cols=27  Identities=11%  Similarity=0.140  Sum_probs=25.0

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      .|.|..|++.|.....|.+|+++|.++
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHHhccC
Confidence            489999999999999999999999875

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.34  E-value=9.9e-05  Score=42.67  Aligned_cols=28  Identities=18%  Similarity=0.041  Sum_probs=25.3

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCCC
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      .|.|..|++.|.....|.+|+++|.+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            4889999999999999999999998763

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.30  E-value=0.00016  Score=42.93  Aligned_cols=27  Identities=19%  Similarity=0.065  Sum_probs=24.4

Q ss_pred             ccccc--cCCCCCCCHHHHHHHHhhhcCC
Q 021252           75 STDIE--IYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        75 ~~~C~--~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      .|.|.  .|++.|...+.|.+|+++|.++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            37887  9999999999999999999875

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.26  E-value=0.00015  Score=45.26  Aligned_cols=31  Identities=19%  Similarity=0.027  Sum_probs=27.0

Q ss_pred             Cccccc--cCCCCCCCHHHHHHHHhhhcCCCCc
Q 021252           74 ESTDIE--IYGMQGIPPDVLAAHYGEEEEEVPS  104 (315)
Q Consensus        74 r~~~C~--~Cgk~F~~~s~L~~H~r~h~~e~p~  104 (315)
                      +.|.|.  .|++.|...+.|++|+++|.+++++
T Consensus         5 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            5 KPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             cceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            348898  5999999999999999999987654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.24  E-value=0.0002  Score=42.77  Aligned_cols=27  Identities=11%  Similarity=0.005  Sum_probs=24.7

Q ss_pred             ccccc--cCCCCCCCHHHHHHHHhhhcCC
Q 021252           75 STDIE--IYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        75 ~~~C~--~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      .|.|.  .|++.|...+.|.+|+++|.++
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            48888  8999999999999999999875

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.33  E-value=4.5e-05  Score=44.58  Aligned_cols=27  Identities=19%  Similarity=0.161  Sum_probs=24.7

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      .|.|+.|++.|...+.|.+|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            488999999999999999999999865

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.23  E-value=0.00081  Score=48.99  Aligned_cols=29  Identities=10%  Similarity=-0.011  Sum_probs=26.3

Q ss_pred             CccccccCCCCCCCHHHHHHHHhhhcCCC
Q 021252           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        74 r~~~C~~Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      +.|.|..|++.|.+.+.|++|+++|+++.
T Consensus        12 kpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A           12 GILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             cCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            34999999999999999999999999864

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.19  E-value=0.00016  Score=41.78  Aligned_cols=26  Identities=12%  Similarity=0.133  Sum_probs=23.7

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcC
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~  100 (315)
                      .|.|..|++.|...+.|.+|+++|.+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHhcCC
Confidence            48999999999999999999998863

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.16  E-value=0.00018  Score=41.30  Aligned_cols=25  Identities=4%  Similarity=0.011  Sum_probs=23.0

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhc
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEE   99 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~   99 (315)
                      .|.|..|++.|...+.|.+|+++|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            3 PFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CccCCCcChhhCCHHHHHHHHHHcc
Confidence            4899999999999999999999874

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.13  E-value=2e-05  Score=47.91  Aligned_cols=30  Identities=13%  Similarity=-0.023  Sum_probs=27.0

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCCCCc
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~  104 (315)
                      .|.|+.|++.|...+.|.+|+++|.+++++
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            488999999999999999999999987654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.13  E-value=0.00024  Score=44.30  Aligned_cols=29  Identities=21%  Similarity=0.013  Sum_probs=25.2

Q ss_pred             Ccccccc--CCCCCCCHHHHHHHHhhhcCCC
Q 021252           74 ESTDIEI--YGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        74 r~~~C~~--Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      +.|.|.+  |++.|...+.|++|+++|.+++
T Consensus         7 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            7 KQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            3488884  9999999999999999998763

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.11  E-value=0.00023  Score=41.53  Aligned_cols=27  Identities=11%  Similarity=0.009  Sum_probs=24.2

Q ss_pred             ccccccCCCCCCCHHHHHHH-HhhhcCC
Q 021252           75 STDIEIYGMQGIPPDVLAAH-YGEEEEE  101 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H-~r~h~~e  101 (315)
                      .|.|..|++.|...+.|.+| +++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            38899999999999999999 7888765

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.08  E-value=0.00017  Score=41.69  Aligned_cols=25  Identities=8%  Similarity=-0.024  Sum_probs=22.9

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhc
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEE   99 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~   99 (315)
                      .|.|..|++.|...+.|++|+++|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCCCCCCcccCCHHHHHHHHHhcC
Confidence            4899999999999999999998873

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.13  E-value=8.6e-05  Score=43.40  Aligned_cols=27  Identities=19%  Similarity=-0.026  Sum_probs=24.7

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      .|.|..|++.|.....|.+|+++|.++
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            489999999999999999999999865

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.09  E-value=9.8e-05  Score=42.10  Aligned_cols=25  Identities=20%  Similarity=0.174  Sum_probs=22.7

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhc
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEE   99 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~   99 (315)
                      .|.|+.|++.|...+.|.+|+++|+
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            4889999999999999999999874

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.86  E-value=0.00084  Score=48.45  Aligned_cols=52  Identities=17%  Similarity=0.203  Sum_probs=24.9

Q ss_pred             CcccCCCchhhHhHHh-hhccCcccccCCCCCCCCcccc--ccCCCCCCCHHHHHHHHhhh
Q 021252           41 CHKKLSTAGGMAIHVL-QVHKENVTKVPNAKPGRESTDI--EIYGMQGIPPDVLAAHYGEE   98 (315)
Q Consensus        41 CgktF~~~~~L~rH~r-~hh~ekp~~cp~~~~grr~~~C--~~Cgk~F~~~s~L~~H~r~h   98 (315)
                      |++.|.+...|.+|+. .|.+.+.      ....+.|.|  +.|++.+.....|..|++.+
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~------~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDF------KHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCC------CCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCccc------CCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            5555555555655553 2323221      001112444  36666666666666666553

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=96.77  E-value=0.00055  Score=39.41  Aligned_cols=26  Identities=12%  Similarity=-0.171  Sum_probs=23.4

Q ss_pred             ccccc--cCCCCCCCHHHHHHHHhhhcC
Q 021252           75 STDIE--IYGMQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        75 ~~~C~--~Cgk~F~~~s~L~~H~r~h~~  100 (315)
                      .|.|.  .|++.|...+.|.+|+++|.+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            37899  999999999999999999863

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=95.50  E-value=0.019  Score=41.12  Aligned_cols=47  Identities=17%  Similarity=0.295  Sum_probs=40.4

Q ss_pred             ccCc--CCcccCChHHHHHHhc-----CC------ccccc--cCcccCCCchhhHhHHhhhc
Q 021252           13 WCYY--CDREFDDEKILVQHQK-----AK------HFKCH--VCHKKLSTAGGMAIHVLQVH   59 (315)
Q Consensus        13 ~C~~--CgK~F~~~s~Lk~H~r-----eK------PfkC~--~CgktF~~~~~L~rH~r~hh   59 (315)
                      .|.+  |++.|.....|..|+.     .+      .|.|.  .|++.+.....|.+|+|..|
T Consensus         3 ~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            3 KCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             eEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            4655  9999999999999974     22      79997  79999999999999998765

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.46  E-value=0.0049  Score=50.40  Aligned_cols=70  Identities=19%  Similarity=0.189  Sum_probs=42.7

Q ss_pred             cccCcCCcccCChHHHHHHhc-------CCccccccC------cccCCCchhhHhHHhhhccCcccccCCCCCCCCcccc
Q 021252           12 VWCYYCDREFDDEKILVQHQK-------AKHFKCHVC------HKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDI   78 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r-------eKPfkC~~C------gktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C   78 (315)
                      ++|.+|+..|...+.+..|.+       .+.|.+..+      ++.|....    +.            ......+.+-|
T Consensus        33 ~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~------------~~~~~~~~~~C   96 (127)
T 1zu1_A           33 TQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AE------------ISDGEDRSKCC   96 (127)
T ss_dssp             SEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SC------------CSSCCCTTTEE
T ss_pred             CcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cc------------cccCCCCCeEc
Confidence            458888888888888887775       344444211      11111100    00            00112334889


Q ss_pred             ccCCCCCCCHHHHHHHHhh
Q 021252           79 EIYGMQGIPPDVLAAHYGE   97 (315)
Q Consensus        79 ~~Cgk~F~~~s~L~~H~r~   97 (315)
                      ++|.+.|.....+..|.+.
T Consensus        97 ~~C~~~f~s~~~~~~H~~g  115 (127)
T 1zu1_A           97 PVCNMTFSSPVVAESHYIG  115 (127)
T ss_dssp             TTTTEECSSHHHHHHHHTS
T ss_pred             CCCCCEeCCHHHHHHHHCC
Confidence            9999999999999999854

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=93.74  E-value=0.015  Score=47.55  Aligned_cols=26  Identities=12%  Similarity=0.333  Sum_probs=23.8

Q ss_pred             CCccccccCcccCCCchhhHhHHhhh
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQV   58 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~h   58 (315)
                      +++|.|..|++.|.+...|..|+|+.
T Consensus        48 ekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           48 GGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             CcceEcccCcchhCCHHHHHHHHhhh
Confidence            89999999999999999999998755

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=93.37  E-value=0.034  Score=45.50  Aligned_cols=24  Identities=33%  Similarity=0.486  Sum_probs=21.2

Q ss_pred             ccccCcCCcccCChHHHHHHhcCC
Q 021252           11 KVWCYYCDREFDDEKILVQHQKAK   34 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~reK   34 (315)
                      .|+|.+|+|.|.+..+|..|++.|
T Consensus        50 pfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           50 LHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ceEcccCcchhCCHHHHHHHHhhh
Confidence            467999999999999999998843

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=91.66  E-value=0.095  Score=44.11  Aligned_cols=78  Identities=15%  Similarity=0.198  Sum_probs=49.3

Q ss_pred             ccc--CcCCcccCChHHHHHHhc---CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCC
Q 021252           12 VWC--YYCDREFDDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGI   86 (315)
Q Consensus        12 ~~C--~~CgK~F~~~s~Lk~H~r---eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~   86 (315)
                      .+|  .-|+..+. ...|..|++   .++..|..|+..+ .+..|..|....-..            +...|..|+..+.
T Consensus        83 v~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~------------r~~~C~~C~~~~~  148 (170)
T 3hcs_A           83 VKCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHILKDCPR------------RQVSCDNCAASMA  148 (170)
T ss_dssp             EECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTT------------CEEECTTTCCEEE
T ss_pred             cCCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHhhhhCCC------------CCeECCCCCCccC
Confidence            346  44776654 445778877   5677888888877 556677786432222            2356788887665


Q ss_pred             CHHHHHHHHhhhcCCCCc
Q 021252           87 PPDVLAAHYGEEEEEVPS  104 (315)
Q Consensus        87 ~~s~L~~H~r~h~~e~p~  104 (315)
                      . ..|..|+..+.|+..+
T Consensus       149 ~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          149 F-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             G-GGHHHHHTTCCC----
T ss_pred             H-HHHHhHHHhCcChhhh
Confidence            4 5678999888776543

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=90.80  E-value=0.15  Score=34.67  Aligned_cols=21  Identities=14%  Similarity=0.395  Sum_probs=10.7

Q ss_pred             ccccccCcccCCCchhhHhHH
Q 021252           35 HFKCHVCHKKLSTAGGMAIHV   55 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~   55 (315)
                      .|.|..|++.|...+.|++|+
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hm   32 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHM   32 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhh
Confidence            344555555555555555554

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=90.31  E-value=0.14  Score=34.87  Aligned_cols=24  Identities=21%  Similarity=0.400  Sum_probs=19.0

Q ss_pred             CCccccCcCCcccCChHHHHHHhc
Q 021252            9 SSKVWCYYCDREFDDEKILVQHQK   32 (315)
Q Consensus         9 ~eK~~C~~CgK~F~~~s~Lk~H~r   32 (315)
                      +.++.|..|++.|...+.|++|++
T Consensus        10 ~~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           10 GGRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SSCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CCceeCCcccccccchHHHHhhhh
Confidence            345668888888888888888865

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=83.14  E-value=0.64  Score=28.99  Aligned_cols=22  Identities=32%  Similarity=0.845  Sum_probs=16.6

Q ss_pred             ccccCcCCcccCChHHHHHHhc
Q 021252           11 KVWCYYCDREFDDEKILVQHQK   32 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r   32 (315)
                      |-.|++|.|.+++-.+|..|+|
T Consensus         9 kqhcrfckkkysdvknlikhir   30 (37)
T 2elu_A            9 KQHCRFCKKKYSDVKNLIKHIR   30 (37)
T ss_dssp             CCEETTTTEECSSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            3348888888888888888877

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=82.66  E-value=0.42  Score=36.57  Aligned_cols=28  Identities=18%  Similarity=0.383  Sum_probs=22.7

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp   63 (315)
                      +.-..|.+||+.|.   .|++|.+++|+..+
T Consensus        19 ~d~iiClecGK~fK---~LkRHL~~~hgltp   46 (87)
T 2jsp_A           19 DDHIVCLECGGSFK---SLKRHLTTHHSMTP   46 (87)
T ss_dssp             SSCEECTBTCCEES---BHHHHHHHTTCSCH
T ss_pred             CCceEecccchhhH---HHHHHHHHccCCCH
Confidence            44567999999988   58899999888766

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	315
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	7e-04
d1zr9a1	67	g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593	0.002

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 7e-04
 Identities = 14/34 (41%), Positives = 23/34 (67%)

Query: 30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV 63
          H   K ++C++CH + + +G M +H+LQ H ENV
Sbjct: 3  HSGEKPYECYICHARFTQSGTMKMHILQKHTENV 36

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]} Length = 67

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 0.002
 Identities = 9/24 (37%), Positives = 11/24 (45%)

Query: 14 CYYCDREFDDEKILVQHQKAKHFK 37
          C  C R F D   L  H ++K  K
Sbjct: 18 CLACARYFIDSTNLKTHFRSKDHK 41

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	315
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.4
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.27
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.87
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.8
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.8
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.75
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.74
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.73
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.65
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.61
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.56
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.56
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.54
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.54
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.51
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.48
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.48
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.44
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.4
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.39
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.37
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.35
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.32
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.32
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.29
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.25
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.22
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.2
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.19
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.15
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.14
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.12
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.08
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.08
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.07
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.94
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.91
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.83
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.78
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.69
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.52
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.5
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.49
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.42
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.38
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.32
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.24
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.23
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.18
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.16
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.01
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.87
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.84
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.84
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.76
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.75
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.69
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.66
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.6
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.53
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.46
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.31
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.29
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.27
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.16
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.0
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	95.97
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.97
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.96
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	95.87
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	95.83
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.73
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.63
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.26
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.83
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	94.73
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.31
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.31
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.87
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	93.79
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	93.67
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	93.54
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.37
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.04
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	92.75
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	92.67
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.2
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	91.43
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	91.43
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	90.65
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	90.15
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	89.42
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	89.2
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	88.8
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	87.74
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	86.49
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.48
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	85.95
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	85.03
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	84.56
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	83.02
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	82.44
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	82.23
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	80.64
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	80.1

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=3.9e-14  Score=98.34  Aligned_cols=53  Identities=15%  Similarity=0.161  Sum_probs=44.8

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhh
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEE   98 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h   98 (315)
                      ||+|+|+ ||++|.++.+|.+|+++|.++++            |.|.+||+.|...+.|.+|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekp------------y~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRP------------YGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCS------------EECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccC------------CcCCCcCCEecCHHHHHHHHhcC
Confidence            6888884 88888888888888888888876            78888888888888888888876

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=9.2e-13  Score=91.25  Aligned_cols=46  Identities=22%  Similarity=0.430  Sum_probs=43.3

Q ss_pred             cccCcCCcccCChHHHHHHhc----CCccccccCcccCCCchhhHhHHhhh
Q 021252           12 VWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQV   58 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r----eKPfkC~~CgktF~~~~~L~rH~r~h   58 (315)
                      |.|+ |||.|..+.+|++|++    ||+|+|.+|+++|.+.+.|.+|+++|
T Consensus         4 y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           4 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             EECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5695 9999999999999999    99999999999999999999999865

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=3.3e-10  Score=73.51  Aligned_cols=35  Identities=23%  Similarity=0.369  Sum_probs=30.0

Q ss_pred             CCccccccCcccCCCchhhHhHHh-hhccCcccccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVL-QVHKENVTKVP   67 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r-~hh~ekp~~cp   67 (315)
                      +|||+|.+|+|+|.++++|++|++ +|.+|++|+|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            689999999999999999999976 68889886653

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.80  E-value=6.1e-10  Score=67.08  Aligned_cols=28  Identities=21%  Similarity=0.589  Sum_probs=25.7

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhcc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~   60 (315)
                      ||||+|.+|+|+|.++++|++|+|+|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            7899999999999999999999998875

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.80  E-value=9.6e-10  Score=66.77  Aligned_cols=29  Identities=21%  Similarity=0.494  Sum_probs=26.0

Q ss_pred             CccccccCcccCCCchhhHhHHhhhccCc
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      |||+|.+|+++|.++++|++|+|+|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            68999999999999999999999998875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=2.1e-09  Score=65.19  Aligned_cols=29  Identities=21%  Similarity=0.532  Sum_probs=26.0

Q ss_pred             CccccccCcccCCCchhhHhHHhhhccCc
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      |+|.|.+|+|+|.++++|.+|+|+|.+|+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68999999999999999999999998875

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=1.2e-09  Score=70.43  Aligned_cols=29  Identities=24%  Similarity=0.503  Sum_probs=17.6

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~e   61 (315)
                      ||||+|.+|+|+|.+.++|.+|+|+|+||
T Consensus        10 ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2          10 RRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             CCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            56666666666666666666666655554

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=1.6e-09  Score=67.66  Aligned_cols=32  Identities=25%  Similarity=0.363  Sum_probs=25.3

Q ss_pred             HhcCCccccccCcccCCCchhhHhHHhhhccC
Q 021252           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        30 H~reKPfkC~~CgktF~~~~~L~rH~r~hh~e   61 (315)
                      |..||||+|.+|+++|.++++|.+|+|+|.+|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            44578888888888888888888888887765

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=2.5e-09  Score=68.08  Aligned_cols=33  Identities=24%  Similarity=0.520  Sum_probs=25.9

Q ss_pred             HhcCCccccccCcccCCCchhhHhHHhhhccCc
Q 021252           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        30 H~reKPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      |..||||+|.+|+++|.++++|.+|+++|+++.
T Consensus         3 HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            445888888888888888888888888877653

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=5.7e-09  Score=67.16  Aligned_cols=37  Identities=14%  Similarity=-0.000  Sum_probs=34.2

Q ss_pred             hHHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        53 rH~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      +|+++|.++++            |.|+.|||.|.+.+.|.+|+++|+||
T Consensus         2 rH~~~Ht~ekp------------y~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRR------------YKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCS------------SBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCC------------EecCCCCceeeCHHHHHHhCccCCCC
Confidence            68888889887            88999999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=8.2e-09  Score=65.63  Aligned_cols=33  Identities=39%  Similarity=0.906  Sum_probs=27.3

Q ss_pred             HhcCCccccccCcccCCCchhhHhHHhhhccCc
Q 021252           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        30 H~reKPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      |..||||+|.+|+++|.++++|++|++.+|++.
T Consensus         3 HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           3 HSGEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             cCCCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            555889999999999999999999988777653

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.56  E-value=1e-08  Score=64.79  Aligned_cols=29  Identities=21%  Similarity=0.448  Sum_probs=24.1

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~e   61 (315)
                      ||||+|.+|+|+|.++++|++|+|+|..+
T Consensus         5 ekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           5 KRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CccccCCCCCCcccChHHHHHHccccCCc
Confidence            78888888888888888888888877653

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=1e-08  Score=60.38  Aligned_cols=26  Identities=31%  Similarity=0.503  Sum_probs=21.7

Q ss_pred             CccccccCcccCCCchhhHhHHhhhc
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHVLQVH   59 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~r~hh   59 (315)
                      |||+|.+|||+|.++++|.+|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            68888888888888888888888773

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=1.9e-08  Score=64.98  Aligned_cols=31  Identities=29%  Similarity=0.559  Sum_probs=27.5

Q ss_pred             CccccCcCCcccCChHHHHHHhc-----CCcccccc
Q 021252           10 SKVWCYYCDREFDDEKILVQHQK-----AKHFKCHV   40 (315)
Q Consensus        10 eK~~C~~CgK~F~~~s~Lk~H~r-----eKPfkC~~   40 (315)
                      +.|+|++|||.|.+.++|++|++     ||||+|++
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            34569999999999999999975     99999975

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.51  E-value=6.4e-09  Score=70.03  Aligned_cols=37  Identities=19%  Similarity=0.359  Sum_probs=27.5

Q ss_pred             HHHHHhc---CCcccccc--CcccCCCchhhHhHHhhhccCc
Q 021252           26 ILVQHQK---AKHFKCHV--CHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        26 ~Lk~H~r---eKPfkC~~--CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      .|.+|++   ||+|+|.+  |+++|.++++|++|+|+|.+|+
T Consensus         6 ~l~~h~~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhhccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            3455555   78888876  8888888888888888887764

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.48  E-value=2.4e-08  Score=63.81  Aligned_cols=27  Identities=26%  Similarity=0.543  Sum_probs=18.9

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh   59 (315)
                      ||||+|.+|+++|.++++|++|+++|.
T Consensus         9 eKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           9 IKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             SSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             ccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            677777777777777777777766654

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=2.8e-08  Score=60.54  Aligned_cols=28  Identities=29%  Similarity=0.478  Sum_probs=23.8

Q ss_pred             Ccccccc--CcccCCCchhhHhHHhhhccC
Q 021252           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        34 KPfkC~~--CgktF~~~~~L~rH~r~hh~e   61 (315)
                      |||+|.+  |+|+|.++++|++|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6888888  888888888888888888775

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=2.9e-08  Score=60.49  Aligned_cols=28  Identities=29%  Similarity=0.500  Sum_probs=24.0

Q ss_pred             Ccccccc--CcccCCCchhhHhHHhhhccC
Q 021252           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        34 KPfkC~~--CgktF~~~~~L~rH~r~hh~e   61 (315)
                      |||+|.+  |+|+|.++++|++|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6888987  999999999999999888775

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=4.6e-08  Score=62.05  Aligned_cols=32  Identities=16%  Similarity=0.226  Sum_probs=25.6

Q ss_pred             ccccc--CcccCCCchhhHhHHhhhccCcccccC
Q 021252           36 FKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVP   67 (315)
Q Consensus        36 fkC~~--CgktF~~~~~L~rH~r~hh~ekp~~cp   67 (315)
                      |+|..  |+++|.++++|++|+|+|.+|++|+|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            67776  888888888888888888888886653

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=5.8e-08  Score=59.57  Aligned_cols=29  Identities=21%  Similarity=0.447  Sum_probs=23.9

Q ss_pred             Ccccccc--CcccCCCchhhHhHHhhhccCc
Q 021252           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        34 KPfkC~~--CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      |||+|.+  |+|+|.+.++|++|+|+|++||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            6888864  8888888888888888888775

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.37  E-value=9e-08  Score=59.09  Aligned_cols=29  Identities=14%  Similarity=0.391  Sum_probs=25.9

Q ss_pred             CCcccccc--CcccCCCchhhHhHHhhhccC
Q 021252           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        33 eKPfkC~~--CgktF~~~~~L~rH~r~hh~e   61 (315)
                      ||||.|.+  |+|+|.+.++|++|+++|..+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            78999998  999999999999999888654

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=8.2e-08  Score=60.86  Aligned_cols=35  Identities=9%  Similarity=-0.042  Sum_probs=31.0

Q ss_pred             hhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCCC
Q 021252           56 LQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        56 r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      |+|++|++            |.|++||+.|.+.+.|.+|+++|+++.
T Consensus         1 R~HTgekP------------y~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKP------------YACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCC------------EECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCC------------EECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            46778876            899999999999999999999998763

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=1.3e-07  Score=58.80  Aligned_cols=27  Identities=15%  Similarity=0.026  Sum_probs=25.4

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      +|+|..||+.|.+.+.|.+|+++|++|
T Consensus         7 py~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           7 PYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CeeCCCCCCEeCchHHhHhhccccCCC
Confidence            399999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.32  E-value=1.1e-07  Score=60.57  Aligned_cols=35  Identities=11%  Similarity=-0.174  Sum_probs=31.8

Q ss_pred             HHhhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcC
Q 021252           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        54 H~r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~  100 (315)
                      |.|+|++||+            |.|..|++.|.+.+.|++|+++|..
T Consensus         2 h~R~HTgeKP------------y~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKP------------FQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSS------------BCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccC------------eEeCCCCCEecCHHHHHHHHhcCcC
Confidence            6788999987            8899999999999999999999864

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.29  E-value=1.9e-07  Score=56.29  Aligned_cols=28  Identities=21%  Similarity=0.144  Sum_probs=26.4

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCCC
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      .|.|.+|++.|.+.+.|++|+++|++|+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCCC
Confidence            4899999999999999999999999975

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=1.9e-07  Score=52.97  Aligned_cols=26  Identities=27%  Similarity=0.409  Sum_probs=22.0

Q ss_pred             ccccccCcccCCCchhhHhHHhhhcc
Q 021252           35 HFKCHVCHKKLSTAGGMAIHVLQVHK   60 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~r~hh~   60 (315)
                      |++|++|+|.|++++.|+.|+|.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57899999999999999999887764

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=3.6e-07  Score=55.07  Aligned_cols=28  Identities=11%  Similarity=0.027  Sum_probs=26.2

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCCC
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      .|.|.+||+.|.+.+.|.+|+++|++|+
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCcC
Confidence            4999999999999999999999999874

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.20  E-value=1.8e-07  Score=56.42  Aligned_cols=27  Identities=19%  Similarity=0.565  Sum_probs=22.7

Q ss_pred             Ccccccc--CcccCCCchhhHhHHhhhcc
Q 021252           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHK   60 (315)
Q Consensus        34 KPfkC~~--CgktF~~~~~L~rH~r~hh~   60 (315)
                      |||+|.+  |+|+|.+.++|++|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6888887  88888888888888888764

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=3.1e-07  Score=54.83  Aligned_cols=26  Identities=23%  Similarity=0.629  Sum_probs=23.1

Q ss_pred             Ccccccc--CcccCCCchhhHhHHhhhc
Q 021252           34 KHFKCHV--CHKKLSTAGGMAIHVLQVH   59 (315)
Q Consensus        34 KPfkC~~--CgktF~~~~~L~rH~r~hh   59 (315)
                      |||+|..  |+|+|.+.++|++|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899988  9999999999999998874

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.15  E-value=4.4e-07  Score=57.03  Aligned_cols=28  Identities=11%  Similarity=-0.117  Sum_probs=25.6

Q ss_pred             CccccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        74 r~~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      ++|.|++|++.|.+.++|++|+++|.++
T Consensus         6 kPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           6 RPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             ccccCCCCCCcccChHHHHHHccccCCc
Confidence            3499999999999999999999999875

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.14  E-value=1.6e-07  Score=62.92  Aligned_cols=42  Identities=10%  Similarity=-0.007  Sum_probs=35.9

Q ss_pred             chhhHhHHhhhccCcccccCCCCCCCCcccccc--CCCCCCCHHHHHHHHhhhcCCC
Q 021252           48 AGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI--YGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        48 ~~~L~rH~r~hh~ekp~~cp~~~~grr~~~C~~--Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      ++.|.+|+ .|.+|++            |.|.+  |++.|.+.+.|++|+++|++|+
T Consensus         4 ~~~l~~h~-~h~gekp------------y~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYV-KEMPDKT------------FECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSC-EEETTTE------------EECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchh-hccCCCC------------eECCcCCCCccccCchHHHhhcccccCCC
Confidence            46778888 4888887            77765  9999999999999999999874

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.12  E-value=5e-07  Score=53.97  Aligned_cols=27  Identities=15%  Similarity=0.036  Sum_probs=24.9

Q ss_pred             CccccccCCCCCCCHHHHHHHHhhhcC
Q 021252           74 ESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        74 r~~~C~~Cgk~F~~~s~L~~H~r~h~~  100 (315)
                      ++|.|.+|++.|.+.+.|++|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            349999999999999999999999985

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=6e-07  Score=56.74  Aligned_cols=34  Identities=12%  Similarity=0.011  Sum_probs=28.5

Q ss_pred             hhhccCcccccCCCCCCCCccccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           56 LQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        56 r~hh~ekp~~cp~~~~grr~~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      |+|+||+|            |.|++|++.|.+.++|++|++.++.+
T Consensus         1 R~HTgekP------------~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKP------------YECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCS------------EECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCC------------EeCCCCcccccchHHHHHHcccccCC
Confidence            46778877            89999999999999999998765543

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.08  E-value=5.6e-07  Score=52.50  Aligned_cols=27  Identities=22%  Similarity=0.453  Sum_probs=22.7

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh   59 (315)
                      ||||.|++||+.|.+.+..+||.+.|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            688899999999999888888887663

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=7.8e-07  Score=56.20  Aligned_cols=29  Identities=28%  Similarity=0.630  Sum_probs=26.4

Q ss_pred             cccCc--CCcccCChHHHHHHhc----CCcccccc
Q 021252           12 VWCYY--CDREFDDEKILVQHQK----AKHFKCHV   40 (315)
Q Consensus        12 ~~C~~--CgK~F~~~s~Lk~H~r----eKPfkC~~   40 (315)
                      |.|.+  |+|+|.++++|++|++    ||||+|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            56887  9999999999999999    99999973

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=1.6e-06  Score=50.75  Aligned_cols=25  Identities=12%  Similarity=-0.133  Sum_probs=23.5

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhc
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEE   99 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~   99 (315)
                      +|+|..|||.|.+.+.|.+|+|+|+
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCCC
Confidence            4999999999999999999999984

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=3.5e-06  Score=50.96  Aligned_cols=27  Identities=11%  Similarity=0.023  Sum_probs=24.2

Q ss_pred             cccccc--CCCCCCCHHHHHHHHhhhcCC
Q 021252           75 STDIEI--YGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        75 ~~~C~~--Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      .|.|..  |+++|.+.+.|++|+|+|++|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            377766  999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=3.5e-06  Score=50.95  Aligned_cols=27  Identities=11%  Similarity=-0.049  Sum_probs=24.0

Q ss_pred             cccccc--CCCCCCCHHHHHHHHhhhcCC
Q 021252           75 STDIEI--YGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        75 ~~~C~~--Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      .|.|.+  |++.|.+.+.|++|+|+|++|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCCC
Confidence            377755  999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=7.2e-06  Score=49.91  Aligned_cols=27  Identities=19%  Similarity=0.043  Sum_probs=24.2

Q ss_pred             ccc--ccCCCCCCCHHHHHHHHhhhcCCC
Q 021252           76 TDI--EIYGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        76 ~~C--~~Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      |.|  +.|++.|.+.++|++|+++|++|+
T Consensus         3 f~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            566  579999999999999999999874

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=6.5e-06  Score=48.69  Aligned_cols=29  Identities=24%  Similarity=0.484  Sum_probs=25.2

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~e   61 (315)
                      ||||.|.+|..+|.+++.+.-|.|.|-+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            68999999999999999999999888664

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=1.5e-05  Score=45.83  Aligned_cols=27  Identities=22%  Similarity=0.327  Sum_probs=19.3

Q ss_pred             ccccccCcccCCCchhhHhHHhhhccC
Q 021252           35 HFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~r~hh~e   61 (315)
                      -+.|.+|||.|...+.|+||+..|++|
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            356777777777777777777666654

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=1.6e-05  Score=45.99  Aligned_cols=29  Identities=17%  Similarity=0.527  Sum_probs=22.9

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~e   61 (315)
                      ||||+|..|...-...+.|..|.|.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            67888888888878888888888877653

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=1.6e-05  Score=47.99  Aligned_cols=28  Identities=21%  Similarity=0.362  Sum_probs=14.3

Q ss_pred             cccccCcccCCCchhhHhHHhhhccCcc
Q 021252           36 FKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (315)
Q Consensus        36 fkC~~CgktF~~~~~L~rH~r~hh~ekp   63 (315)
                      ..|+.|||.|...-+|+||...|.+||+
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekp   33 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKP   33 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCC
Confidence            3455555555555555555555555554

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.42  E-value=2.5e-05  Score=46.75  Aligned_cols=26  Identities=8%  Similarity=-0.143  Sum_probs=22.5

Q ss_pred             ccccc--cCCCCCCCHHHHHHHHhhhcC
Q 021252           75 STDIE--IYGMQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        75 ~~~C~--~Cgk~F~~~s~L~~H~r~h~~  100 (315)
                      .|.|.  .|++.|.+.+.|++|+++|+|
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccCC
Confidence            36665  499999999999999999975

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.38  E-value=5.3e-05  Score=46.27  Aligned_cols=27  Identities=11%  Similarity=0.033  Sum_probs=23.3

Q ss_pred             cccccc--CCCCCCCHHHHHHHHhhhcCC
Q 021252           75 STDIEI--YGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        75 ~~~C~~--Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      .|.|..  |++.|.+.++|++|+++|...
T Consensus         3 P~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           3 PYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            377765  999999999999999999854

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=6.9e-05  Score=42.23  Aligned_cols=25  Identities=20%  Similarity=0.110  Sum_probs=23.1

Q ss_pred             cccccCCCCCCCHHHHHHHHhhhcC
Q 021252           76 TDIEIYGMQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        76 ~~C~~Cgk~F~~~s~L~~H~r~h~~  100 (315)
                      .+|+.|+|-|.+++.|+.|+|.|++
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            5799999999999999999999975

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=4.6e-05  Score=45.12  Aligned_cols=24  Identities=8%  Similarity=-0.177  Sum_probs=21.0

Q ss_pred             cccc--cCCCCCCCHHHHHHHHhhhc
Q 021252           76 TDIE--IYGMQGIPPDVLAAHYGEEE   99 (315)
Q Consensus        76 ~~C~--~Cgk~F~~~s~L~~H~r~h~   99 (315)
                      |.|.  .|||.|.+.++|++|+|+|+
T Consensus         3 f~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           3 YVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             cCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5564  59999999999999999985

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=6.7e-05  Score=45.23  Aligned_cols=32  Identities=25%  Similarity=0.110  Sum_probs=28.9

Q ss_pred             CCccccccCCCCCCCHHHHHHHHhhhcCCCCc
Q 021252           73 RESTDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (315)
Q Consensus        73 rr~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p~  104 (315)
                      |+...|++|||.|.+...|.+|.-+|.+|+++
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            45578999999999999999999999999875

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=6.1e-05  Score=44.26  Aligned_cols=27  Identities=30%  Similarity=0.677  Sum_probs=17.4

Q ss_pred             Ccccccc--CcccCCCchhhHhHHhhhcc
Q 021252           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHK   60 (315)
Q Consensus        34 KPfkC~~--CgktF~~~~~L~rH~r~hh~   60 (315)
                      |||.|.+  |+|++...++|++|++.+||
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4666665  66666666666666666554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.16  E-value=0.0001  Score=42.70  Aligned_cols=26  Identities=15%  Similarity=0.023  Sum_probs=23.7

Q ss_pred             CccccccCCCCCCCHHHHHHHHhhhc
Q 021252           74 ESTDIEIYGMQGIPPDVLAAHYGEEE   99 (315)
Q Consensus        74 r~~~C~~Cgk~F~~~s~L~~H~r~h~   99 (315)
                      ++|.|++||+.|.+.+..++|.++|.
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCcccchhhhhhhcchhhhhhhhhcc
Confidence            34999999999999999999999985

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.01  E-value=0.00015  Score=40.45  Aligned_cols=23  Identities=17%  Similarity=0.531  Sum_probs=18.1

Q ss_pred             cccccCcccCCCchhhHhHHhhh
Q 021252           36 FKCHVCHKKLSTAGGMAIHVLQV   58 (315)
Q Consensus        36 fkC~~CgktF~~~~~L~rH~r~h   58 (315)
                      |+|..|.++|..++.|.+|+|.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            67888888888888888887655

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.87  E-value=0.00016  Score=42.89  Aligned_cols=27  Identities=15%  Similarity=0.528  Sum_probs=23.6

Q ss_pred             ccccccCcccCCCchhhHhHHhhhccC
Q 021252           35 HFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~r~hh~e   61 (315)
                      ||.|.+|++.|.+++.|.||....|+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            689999999999999999998766654

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.00041  Score=40.32  Aligned_cols=28  Identities=18%  Similarity=0.568  Sum_probs=22.9

Q ss_pred             CccccccCcccCCCchhhHhHHhhhccC
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~r~hh~e   61 (315)
                      |||+|.+|..+....++|+.|+++.|.+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            5788888888888888888888877764

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.84  E-value=0.00031  Score=39.74  Aligned_cols=26  Identities=27%  Similarity=0.489  Sum_probs=19.7

Q ss_pred             ccccCcccCCCchhhHhHHhhhccCc
Q 021252           37 KCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        37 kC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      +|..|.|+|.++--|+.|-|.|++|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            57777888888888888877777764

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00037  Score=40.24  Aligned_cols=26  Identities=12%  Similarity=0.301  Sum_probs=12.9

Q ss_pred             cccccCcccCCCchhhHhHHhhhccC
Q 021252           36 FKCHVCHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        36 fkC~~CgktF~~~~~L~rH~r~hh~e   61 (315)
                      |.|.+|+......+-|++|+|.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            44555555555555555555554443

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.75  E-value=0.00028  Score=40.93  Aligned_cols=28  Identities=21%  Similarity=0.576  Sum_probs=23.5

Q ss_pred             CccccccCcccCCCchhhHhHHhhhccC
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~r~hh~e   61 (315)
                      |||+|..|.-.-.+.++|..|++..|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            6889999988888889999998877764

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.69  E-value=0.0007  Score=39.06  Aligned_cols=27  Identities=19%  Similarity=0.227  Sum_probs=25.1

Q ss_pred             cccccCCCCCCCHHHHHHHHhhhcCCC
Q 021252           76 TDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        76 ~~C~~Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      |.|+.||......+.|++|.|+|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999864

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.66  E-value=0.00037  Score=40.41  Aligned_cols=28  Identities=29%  Similarity=0.523  Sum_probs=24.3

Q ss_pred             Ccccccc--CcccCCCchhhHhHHhhhccC
Q 021252           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        34 KPfkC~~--CgktF~~~~~L~rH~r~hh~e   61 (315)
                      |||.|.+  |.|.|.+..+|.||..+|++|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            6888876  999999999999999888775

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.00049  Score=39.39  Aligned_cols=26  Identities=15%  Similarity=-0.021  Sum_probs=23.8

Q ss_pred             cccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           76 TDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        76 ~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      ..|..|||.|...+.|++|.-.|++|
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            67899999999999999999999875

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.00047  Score=39.39  Aligned_cols=25  Identities=20%  Similarity=0.478  Sum_probs=16.2

Q ss_pred             CccccccCcccCCCchhhHhHHhhh
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHVLQV   58 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~r~h   58 (315)
                      |||+|..|...-...++|++|+|.|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            5666666666666666666666554

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.46  E-value=0.00048  Score=39.74  Aligned_cols=25  Identities=20%  Similarity=0.406  Sum_probs=17.5

Q ss_pred             Ccccccc--CcccCCCchhhHhHHhhh
Q 021252           34 KHFKCHV--CHKKLSTAGGMAIHVLQV   58 (315)
Q Consensus        34 KPfkC~~--CgktF~~~~~L~rH~r~h   58 (315)
                      .||+|..  |+++|...+.|+||.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            3677765  777777777777777654

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.00067  Score=40.11  Aligned_cols=26  Identities=31%  Similarity=0.464  Sum_probs=19.3

Q ss_pred             Ccccccc--CcccCCCchhhHhHH-hhhc
Q 021252           34 KHFKCHV--CHKKLSTAGGMAIHV-LQVH   59 (315)
Q Consensus        34 KPfkC~~--CgktF~~~~~L~rH~-r~hh   59 (315)
                      |||.|++  |.|.|+..++-.+|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            5777877  888888888887886 5554

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.0011  Score=38.83  Aligned_cols=27  Identities=11%  Similarity=0.164  Sum_probs=25.0

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      .|.|.+|..+|.+++.+.-|.|+|++.
T Consensus         3 p~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           3 PYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             SSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CcccchHHHHhhccccceEeeecccCc
Confidence            499999999999999999999999875

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.27  E-value=0.00092  Score=38.03  Aligned_cols=22  Identities=23%  Similarity=0.369  Sum_probs=19.6

Q ss_pred             ccccccCcccCCCchhhHhHHh
Q 021252           35 HFKCHVCHKKLSTAGGMAIHVL   56 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~r   56 (315)
                      ||+|..|||.+.++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6899999999999999999873

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.16  E-value=0.00098  Score=41.58  Aligned_cols=29  Identities=14%  Similarity=0.535  Sum_probs=19.7

Q ss_pred             CccccccCcccCCCchhhHhHHhhhccCc
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~r~hh~ek   62 (315)
                      |.|+|.+|++.|.+-..|--|++.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            45677777777777777777776665443

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.00  E-value=0.0015  Score=37.63  Aligned_cols=29  Identities=21%  Similarity=0.539  Sum_probs=22.0

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~e   61 (315)
                      |.-|.|.+|...|.++-.|+.|+-.|+||
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            34577888888888888888888777664

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=95.97  E-value=0.0022  Score=35.63  Aligned_cols=21  Identities=33%  Similarity=0.718  Sum_probs=19.9

Q ss_pred             cccCcCCcccCChHHHHHHhc
Q 021252           12 VWCYYCDREFDDEKILVQHQK   32 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r   32 (315)
                      |+|..|.+.|..++.|.+|+|
T Consensus         1 ykcglcersfveksalsrhqr   21 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQR   21 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGG
T ss_pred             CcccchHHHHHHHHHHHHHHH
Confidence            579999999999999999998

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.97  E-value=0.0017  Score=37.94  Aligned_cols=25  Identities=12%  Similarity=-0.057  Sum_probs=21.1

Q ss_pred             cccc--cCCCCCCCHHHHHHHHhhhcC
Q 021252           76 TDIE--IYGMQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        76 ~~C~--~Cgk~F~~~s~L~~H~r~h~~  100 (315)
                      |.|.  .|+|++.+.+.|++|++.++|
T Consensus         3 Y~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           3 YVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             eecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5554  599999999999999998764

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.0017  Score=37.23  Aligned_cols=28  Identities=11%  Similarity=0.119  Sum_probs=25.2

Q ss_pred             CccccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        74 r~~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      +.|+|.+|.....+.+.|..|.|.|+++
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CcceeeecccccCCchheEEeeecccCc
Confidence            4589999999999999999999999874

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.0014  Score=37.77  Aligned_cols=23  Identities=22%  Similarity=0.615  Sum_probs=16.1

Q ss_pred             ccccccCcccCCCchhhHhHHhh
Q 021252           35 HFKCHVCHKKLSTAGGMAIHVLQ   57 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~r~   57 (315)
                      ||.|..|.-.|.++++|.+|++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            56677777777777777777653

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.83  E-value=0.0014  Score=41.45  Aligned_cols=22  Identities=27%  Similarity=0.691  Sum_probs=17.9

Q ss_pred             CccccccCcccCCCchhhHhHH
Q 021252           34 KHFKCHVCHKKLSTAGGMAIHV   55 (315)
Q Consensus        34 KPfkC~~CgktF~~~~~L~rH~   55 (315)
                      |||.|.+|+|+|..++++.||.
T Consensus         4 KPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           4 KPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCEECSSSCCEESCHHHHHHHH
T ss_pred             CceeccchhhhhhhHHHHHHhh
Confidence            6788888888888888888885

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.73  E-value=0.0043  Score=34.89  Aligned_cols=26  Identities=12%  Similarity=0.029  Sum_probs=24.0

Q ss_pred             ccccCCCCCCCHHHHHHHHhhhcCCC
Q 021252           77 DIEIYGMQGIPPDVLAAHYGEEEEEV  102 (315)
Q Consensus        77 ~C~~Cgk~F~~~s~L~~H~r~h~~e~  102 (315)
                      +|.+|.+.|..+.-|+.|.|.|++|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58899999999999999999999874

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.63  E-value=0.0022  Score=39.86  Aligned_cols=26  Identities=23%  Similarity=0.580  Sum_probs=20.4

Q ss_pred             CCcccccc--CcccCCCchhhHhHHhhh
Q 021252           33 AKHFKCHV--CHKKLSTAGGMAIHVLQV   58 (315)
Q Consensus        33 eKPfkC~~--CgktF~~~~~L~rH~r~h   58 (315)
                      +|||.|..  |+.+|.+.+.|..|+..|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            68888854  888888888888887555

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.26  E-value=0.0048  Score=35.41  Aligned_cols=21  Identities=19%  Similarity=-0.009  Sum_probs=19.1

Q ss_pred             ccCCCCCCCHHHHHHHHhhhc
Q 021252           79 EIYGMQGIPPDVLAAHYGEEE   99 (315)
Q Consensus        79 ~~Cgk~F~~~s~L~~H~r~h~   99 (315)
                      +.|++.|...+.|++|++.|.
T Consensus         9 egcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           9 EGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             TTCCCEESSHHHHHHHHHHHH
T ss_pred             cCccccccCHHHHhhhhhccC
Confidence            689999999999999999873

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.83  E-value=0.0074  Score=34.26  Aligned_cols=25  Identities=8%  Similarity=0.040  Sum_probs=22.8

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhc
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEE   99 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~   99 (315)
                      .++|..|...-.+.+.|++|+|+|.
T Consensus         3 p~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CcccccccchhcchhhHhhhhhccc
Confidence            4889999999999999999999986

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.73  E-value=0.0097  Score=36.91  Aligned_cols=30  Identities=10%  Similarity=0.056  Sum_probs=26.6

Q ss_pred             CccccccCCCCCCCHHHHHHHHhhhcCCCC
Q 021252           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEEVP  103 (315)
Q Consensus        74 r~~~C~~Cgk~F~~~s~L~~H~r~h~~e~p  103 (315)
                      +.|+|.+|++.|.....|--|++.|..++.
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchHH
Confidence            359999999999999999999999987653

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.31  E-value=0.0085  Score=33.27  Aligned_cols=24  Identities=29%  Similarity=0.733  Sum_probs=18.2

Q ss_pred             cccccCcccCCCchhhHhHHhhhc
Q 021252           36 FKCHVCHKKLSTAGGMAIHVLQVH   59 (315)
Q Consensus        36 fkC~~CgktF~~~~~L~rH~r~hh   59 (315)
                      |.|.+|-|.|.+++++..|.+..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            567888888888888888876655

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.31  E-value=0.0061  Score=36.76  Aligned_cols=26  Identities=27%  Similarity=0.446  Sum_probs=21.0

Q ss_pred             ccccccCcccCCCchhhHhHHhhhcc
Q 021252           35 HFKCHVCHKKLSTAGGMAIHVLQVHK   60 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~r~hh~   60 (315)
                      -|.|.+|+|+|.++..+.||-....+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48899999999999999998754443

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.87  E-value=0.0063  Score=35.79  Aligned_cols=26  Identities=15%  Similarity=-0.132  Sum_probs=21.6

Q ss_pred             cccc--cCCCCCCCHHHHHHHH-hhhcCC
Q 021252           76 TDIE--IYGMQGIPPDVLAAHY-GEEEEE  101 (315)
Q Consensus        76 ~~C~--~Cgk~F~~~s~L~~H~-r~h~~e  101 (315)
                      |.|+  .|.|.|...++..+|+ |+|.+|
T Consensus         3 Y~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           3 YMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             EECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             ccccCCChhhhhcchhhhhhhccccccCC
Confidence            5564  5999999999999997 888754

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.79  E-value=0.016  Score=36.38  Aligned_cols=24  Identities=13%  Similarity=0.086  Sum_probs=21.1

Q ss_pred             CccccccCCCCCCCHHHHHHHHhh
Q 021252           74 ESTDIEIYGMQGIPPDVLAAHYGE   97 (315)
Q Consensus        74 r~~~C~~Cgk~F~~~s~L~~H~r~   97 (315)
                      ++|+|.+|+|+|.+.+.+.+|...
T Consensus         4 KPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           4 KPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CceeccchhhhhhhHHHHHHhhhh
Confidence            349999999999999999999654

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.67  E-value=0.015  Score=33.36  Aligned_cols=21  Identities=33%  Similarity=0.710  Sum_probs=19.8

Q ss_pred             cccCcCCcccCChHHHHHHhc
Q 021252           12 VWCYYCDREFDDEKILVQHQK   32 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r   32 (315)
                      |.|.+|+..|..+.+|..|++
T Consensus         2 y~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           2 YHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             cccceeeeeEeeccchhHhhh
Confidence            569999999999999999998

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.54  E-value=0.018  Score=32.66  Aligned_cols=22  Identities=27%  Similarity=0.410  Sum_probs=13.9

Q ss_pred             ccccCcCCcccCChHHHHHHhc
Q 021252           11 KVWCYYCDREFDDEKILVQHQK   32 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r   32 (315)
                      ||+|.+|+....++++|+.|+|
T Consensus         2 k~qcphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhh
Confidence            4556666666666666666654

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.37  E-value=0.015  Score=32.08  Aligned_cols=21  Identities=19%  Similarity=0.626  Sum_probs=14.5

Q ss_pred             ccccccCcccCCCchhhHhHH
Q 021252           35 HFKCHVCHKKLSTAGGMAIHV   55 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~   55 (315)
                      ||+|.-|...|.++.+|..|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            567777777777777776665

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.04  E-value=0.03  Score=36.35  Aligned_cols=24  Identities=13%  Similarity=0.063  Sum_probs=22.2

Q ss_pred             cccccCCCCCCCHHHHHHHHhhhc
Q 021252           76 TDIEIYGMQGIPPDVLAAHYGEEE   99 (315)
Q Consensus        76 ~~C~~Cgk~F~~~s~L~~H~r~h~   99 (315)
                      +.|.+|||.|.+...|++|+..|-
T Consensus         7 ~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           7 LPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeccccccccCCHHHHhHhHHhcC
Confidence            789999999999999999998875

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.75  E-value=0.026  Score=32.02  Aligned_cols=25  Identities=24%  Similarity=0.303  Sum_probs=18.9

Q ss_pred             ccccccCcccCCCchhhHhHHhhhc
Q 021252           35 HFKCHVCHKKLSTAGGMAIHVLQVH   59 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~r~hh   59 (315)
                      |-+|..|..+...+..|+.|.|.|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4578888888888888888877653

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.67  E-value=0.053  Score=31.15  Aligned_cols=26  Identities=8%  Similarity=0.129  Sum_probs=22.9

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcC
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~  100 (315)
                      .|+|..|..+..+.++|+.|.++.++
T Consensus         2 py~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             Cccccccccccccchhhhhhhhcccc
Confidence            48999999999999999999988554

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.20  E-value=0.018  Score=40.43  Aligned_cols=25  Identities=32%  Similarity=0.472  Sum_probs=20.2

Q ss_pred             ccccCcCCcccCChHHHHHHhcCCc
Q 021252           11 KVWCYYCDREFDDEKILVQHQKAKH   35 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~reKP   35 (315)
                      .|+|-.|+|.|.....|..|++.|.
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ksKk   39 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRSKD   39 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTCHH
T ss_pred             EEecccccCccCCHHHHHHHHcccH
Confidence            5779999999999999998877443

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.43  E-value=0.066  Score=30.58  Aligned_cols=27  Identities=11%  Similarity=-0.130  Sum_probs=24.7

Q ss_pred             ccccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        75 ~~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      -|.|..|...|.+.-.|+.||-+|++|
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccCC
Confidence            388999999999999999999999875

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.43  E-value=0.055  Score=31.02  Aligned_cols=27  Identities=11%  Similarity=0.118  Sum_probs=23.0

Q ss_pred             CccccccCCCCCCCHHHHHHHHhhhcC
Q 021252           74 ESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (315)
Q Consensus        74 r~~~C~~Cgk~F~~~s~L~~H~r~h~~  100 (315)
                      |+++|..|...-.+.++|.+|++.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            358999999888999999999987554

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=90.65  E-value=0.064  Score=31.38  Aligned_cols=24  Identities=13%  Similarity=-0.004  Sum_probs=21.4

Q ss_pred             cccccCCCCCCCHHHHHHHHhhhc
Q 021252           76 TDIEIYGMQGIPPDVLAAHYGEEE   99 (315)
Q Consensus        76 ~~C~~Cgk~F~~~s~L~~H~r~h~   99 (315)
                      |.|.+|++.|.+.+.|-+|.++-+
T Consensus         2 f~C~~C~R~FaRrDLlLRH~qKlH   25 (31)
T d2adra2           2 YPCGLCNRAFTRRDLLIRHAQKIH   25 (31)
T ss_dssp             EECTTTCCEESSHHHHHHHHTTTS
T ss_pred             cccccccchhhHHHHHHHHHHHHh
Confidence            789999999999999999987644

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.15  E-value=0.072  Score=34.48  Aligned_cols=24  Identities=25%  Similarity=0.444  Sum_probs=19.1

Q ss_pred             ccccccCcccCCCchhhHhHHhhh
Q 021252           35 HFKCHVCHKKLSTAGGMAIHVLQV   58 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~r~h   58 (315)
                      -|.|-.|+|.|.....|+.|+.+|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            367888888888888888888554

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.42  E-value=0.071  Score=30.07  Aligned_cols=25  Identities=20%  Similarity=0.650  Sum_probs=21.1

Q ss_pred             ccccccCcccCCCchhhHhHHhhhc
Q 021252           35 HFKCHVCHKKLSTAGGMAIHVLQVH   59 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~r~hh   59 (315)
                      .|.|..|+....++++|+.|.|..|
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            4789999999999999999987554

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.20  E-value=0.11  Score=29.10  Aligned_cols=21  Identities=19%  Similarity=0.447  Sum_probs=19.0

Q ss_pred             cccCcCCcccCChHHHHHHhc
Q 021252           12 VWCYYCDREFDDEKILVQHQK   32 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r   32 (315)
                      ++|..|||.+-++++|..|..
T Consensus         2 f~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           2 FECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHH
T ss_pred             CccccchhhhhhHhHHHHHHH
Confidence            579999999999999999964

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.80  E-value=0.11  Score=28.51  Aligned_cols=20  Identities=30%  Similarity=0.526  Sum_probs=18.8

Q ss_pred             cccCcCCcccCChHHHHHHh
Q 021252           12 VWCYYCDREFDDEKILVQHQ   31 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~   31 (315)
                      |+|..|...|-.+.+|+.|+
T Consensus         3 ykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           3 YKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHH
Confidence            67999999999999999996

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.74  E-value=0.12  Score=31.66  Aligned_cols=25  Identities=24%  Similarity=0.061  Sum_probs=21.7

Q ss_pred             cccc--ccCCCCCCCHHHHHHHHhhhc
Q 021252           75 STDI--EIYGMQGIPPDVLAAHYGEEE   99 (315)
Q Consensus        75 ~~~C--~~Cgk~F~~~s~L~~H~r~h~   99 (315)
                      .|.|  ..|+++|.+++.|..|++.|+
T Consensus         6 PF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           6 PFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             ceecCCCCccccccchHHHHHhhhhhe
Confidence            3666  689999999999999999886

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=86.49  E-value=0.14  Score=30.64  Aligned_cols=29  Identities=21%  Similarity=0.599  Sum_probs=22.6

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccC
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~e   61 (315)
                      +.-|+|.+|.+.+...+++.||..+-|..
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSHk~   34 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSHKR   34 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSSS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhccc
Confidence            34588888888888888888888766653

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.48  E-value=0.18  Score=28.22  Aligned_cols=15  Identities=33%  Similarity=0.691  Sum_probs=8.0

Q ss_pred             CCcccCChHHHHHHh
Q 021252           17 CDREFDDEKILVQHQ   31 (315)
Q Consensus        17 CgK~F~~~s~Lk~H~   31 (315)
                      |||+|+....|+.|+
T Consensus         9 c~kafkkhnqlkvhq   23 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQ   23 (28)
T ss_dssp             CCCEESSHHHHHHHH
T ss_pred             chHHHhhccceEEEe
Confidence            555555555555543

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.95  E-value=0.28  Score=27.98  Aligned_cols=26  Identities=42%  Similarity=0.860  Sum_probs=18.7

Q ss_pred             ccccccCcccCCCchhhHhHHhhhcc
Q 021252           35 HFKCHVCHKKLSTAGGMAIHVLQVHK   60 (315)
Q Consensus        35 PfkC~~CgktF~~~~~L~rH~r~hh~   60 (315)
                      -|.|..|+|.+.+...++-|+..-|.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            36788888888887777777755443

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=85.03  E-value=0.21  Score=28.51  Aligned_cols=24  Identities=17%  Similarity=-0.135  Sum_probs=21.4

Q ss_pred             cccCCCCCCCHHHHHHHHhhhcCC
Q 021252           78 IEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        78 C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      -+.|.|.|..-..|.+|.-+|++|
T Consensus         7 ~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           7 EEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             cccccccchhhhhhhhhhccccCC
Confidence            378999999999999999999875

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=84.56  E-value=0.19  Score=28.08  Aligned_cols=20  Identities=20%  Similarity=0.009  Sum_probs=9.9

Q ss_pred             ccCCCCCCCHHHHHHHHhhh
Q 021252           79 EIYGMQGIPPDVLAAHYGEE   98 (315)
Q Consensus        79 ~~Cgk~F~~~s~L~~H~r~h   98 (315)
                      +.|+|.|..-..|+.|+-+|
T Consensus         7 e~c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           7 ENCGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             TTCCCEESSHHHHHHHHHHH
T ss_pred             cCchHHHhhccceEEEeecc
Confidence            34555555555555554444

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=83.02  E-value=0.31  Score=31.33  Aligned_cols=31  Identities=13%  Similarity=0.269  Sum_probs=25.9

Q ss_pred             CCccccccCcccCCCchhhHhHHhhhccCcc
Q 021252           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (315)
Q Consensus        33 eKPfkC~~CgktF~~~~~L~rH~r~hh~ekp   63 (315)
                      |.|-.|.+|+....+..+|++|....|-.|+
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~hf~kp   52 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHTSCSC
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhhccC
Confidence            7888999999999999999999877776553

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=82.44  E-value=0.33  Score=26.63  Aligned_cols=21  Identities=29%  Similarity=0.581  Sum_probs=18.6

Q ss_pred             cccCcCCcccCChHHHHHHhc
Q 021252           12 VWCYYCDREFDDEKILVQHQK   32 (315)
Q Consensus        12 ~~C~~CgK~F~~~s~Lk~H~r   32 (315)
                      |-|.+|-|.|.++.++..|.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEE
Confidence            459999999999999999865

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.23  E-value=0.53  Score=27.99  Aligned_cols=26  Identities=12%  Similarity=-0.045  Sum_probs=22.5

Q ss_pred             cccccCCCCCCCHHHHHHHHhhhcCC
Q 021252           76 TDIEIYGMQGIPPDVLAAHYGEEEEE  101 (315)
Q Consensus        76 ~~C~~Cgk~F~~~s~L~~H~r~h~~e  101 (315)
                      |.|..|||+|.+...+.+|-....+.
T Consensus         5 fvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             eeecccccchhcchHHHHHhhhcCCC
Confidence            88999999999999999997765553

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=80.64  E-value=0.43  Score=27.15  Aligned_cols=25  Identities=28%  Similarity=0.676  Sum_probs=17.0

Q ss_pred             cccccc--CcccCCCchhhHhHHhhhc
Q 021252           35 HFKCHV--CHKKLSTAGGMAIHVLQVH   59 (315)
Q Consensus        35 PfkC~~--CgktF~~~~~L~rH~r~hh   59 (315)
                      -|+|+-  |+-+|.++.++++|....|
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             CccccCCCcceEEeehHHHHHHHhhhc
Confidence            466653  7777777777777765544

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.10  E-value=0.61  Score=26.49  Aligned_cols=22  Identities=14%  Similarity=0.233  Sum_probs=18.8

Q ss_pred             ccccCcCCcccCChHHHHHHhc
Q 021252           11 KVWCYYCDREFDDEKILVQHQK   32 (315)
Q Consensus        11 K~~C~~CgK~F~~~s~Lk~H~r   32 (315)
                      -|.|.+|||..+....++-|.-
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEe
Confidence            4679999999999999988853