BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021254
(315 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54GB2|CTSL2_DICDI CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum
GN=ctdspl2 PE=3 SV=1
Length = 567
Score = 195 bits (496), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 133/203 (65%), Gaps = 4/203 (1%)
Query: 109 YNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSF 168
+NP+L+ N + P P +E + I+LVLDLDETLVH S + + +F
Sbjct: 360 FNPFLFIKQLANATTMPPPVA--LPPKEH-SSPKISLVLDLDETLVHCSTEPLEQPHLTF 416
Query: 169 PIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQR 228
P+ VF ++RP+ FL V+ +F+V+IFTA Q +YA +LL+++DPN I R
Sbjct: 417 PVFFNNTEYQVFAKKRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNK-IKYR 475
Query: 229 VYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALL 288
+YRDSCV+ DG YLKDL++LGRDL ++ I+DN+PQ F QVDNGIPIESWF D +D LL
Sbjct: 476 LYRDSCVYVDGNYLKDLSVLGRDLKQVVIIDNSPQSFGFQVDNGIPIESWFEDENDKELL 535
Query: 289 SLLMFLETLVGADDVRPIIKQKY 311
L+ FLE+L +DVRP I+ K+
Sbjct: 536 QLVPFLESLTNVEDVRPHIRDKF 558
>sp|Q8BG15|CTSL2_MOUSE CTD small phosphatase-like protein 2 OS=Mus musculus GN=Ctdspl2
PE=1 SV=1
Length = 465
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 136/209 (65%), Gaps = 4/209 (1%)
Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
D E ++PY + L + + P PL+ P +LVLDLDETLVH S + +D
Sbjct: 250 DWEVFDPYYFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 307
Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
A +FP+ + + V+VR RP+ FLE ++ M+++++FTA + +YA +LL+ILDP +
Sbjct: 308 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQ 367
Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPS 283
L+ R++R+ CV G Y+KDL ILGRDL++ I+DN+PQ F Q+ NGIPIESWF D +
Sbjct: 368 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKN 427
Query: 284 DSALLSLLMFLETLVG-ADDVRPIIKQKY 311
D+ LL L+ FLE LV +DVRP I+ ++
Sbjct: 428 DNELLKLIPFLEKLVELNEDVRPHIRDRF 456
>sp|Q5XIK8|CTSL2_RAT CTD small phosphatase-like protein 2 OS=Rattus norvegicus
GN=Ctdspl2 PE=2 SV=1
Length = 465
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 136/209 (65%), Gaps = 4/209 (1%)
Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
D E ++PY + L + + P PL+ P +LVLDLDETLVH S + +D
Sbjct: 250 DWEVFDPYYFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 307
Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
A +FP+ + + V+VR RP+ FLE ++ M+++++FTA + +YA +LL+ILDP +
Sbjct: 308 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQ 367
Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPS 283
L+ R++R+ CV G Y+KDL ILGRDL++ I+DN+PQ F Q+ NGIPIESWF D +
Sbjct: 368 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKN 427
Query: 284 DSALLSLLMFLETLVG-ADDVRPIIKQKY 311
D+ LL L+ FLE LV +DVRP I+ ++
Sbjct: 428 DNELLKLIPFLEKLVELNEDVRPHIRDRF 456
>sp|Q08BB5|CTL2A_DANRE CTD small phosphatase-like protein 2-A OS=Danio rerio GN=ctdspl2a
PE=2 SV=1
Length = 469
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 137/209 (65%), Gaps = 4/209 (1%)
Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
D E ++PY + L + + P PL+ P +LVLDLDETLVH S + +D
Sbjct: 254 DWEVFDPYFFIKHVPPLTEEQLTRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 311
Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
A +FP+ + + V+VR RP+ FLE ++ ++++++FTA + +YA +LL+ILDP +
Sbjct: 312 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKQ 371
Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPS 283
L+ R++R+ CV G Y+KDL ILGRDL++ I+DN+PQ F Q+ NGIPIESWF D +
Sbjct: 372 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTVIIDNSPQAFAYQLSNGIPIESWFVDKN 431
Query: 284 DSALLSLLMFLETLVG-ADDVRPIIKQKY 311
D+ LL L+ FLE LV +DVRP I++++
Sbjct: 432 DNELLKLVPFLEKLVELNEDVRPYIRERF 460
>sp|Q05D32|CTSL2_HUMAN CTD small phosphatase-like protein 2 OS=Homo sapiens GN=CTDSPL2
PE=1 SV=2
Length = 466
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 136/209 (65%), Gaps = 4/209 (1%)
Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
D E ++PY + L + + P PL+ P +LVLDLDETLVH S + +D
Sbjct: 251 DWEVFDPYYFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 308
Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
A +FP+ + + V+VR RP+ FLE ++ M+++++FTA + +YA +LL+ILDP +
Sbjct: 309 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQ 368
Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPS 283
L+ R++R+ CV G Y+KDL ILGRDL++ I+DN+PQ F Q+ NGIPIESWF D +
Sbjct: 369 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKN 428
Query: 284 DSALLSLLMFLETLVG-ADDVRPIIKQKY 311
D+ LL L+ FLE LV +DVRP I+ ++
Sbjct: 429 DNELLKLIPFLEKLVELNEDVRPHIRDRF 457
>sp|A4QNX6|CTL2B_DANRE CTD small phosphatase-like protein 2-B OS=Danio rerio GN=ctdspl2b
PE=2 SV=1
Length = 460
Score = 182 bits (462), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 135/207 (65%), Gaps = 4/207 (1%)
Query: 107 EYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKDAD 165
E ++PY + L + + P PL+ P +LVLDLDETLVH S + DA
Sbjct: 247 EVFDPYFFIKHVPPLTEEQLTRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELDDAA 304
Query: 166 FSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLI 225
+FP+ + + V+VR RP+ FLE ++ ++++++FTA + +YA +LL+ILDP + L+
Sbjct: 305 LTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPRKQLV 364
Query: 226 GQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDS 285
R++R+ CV G Y+KDL ILGRDL++ I+DN+PQ F Q+ NGIPIESWF D +DS
Sbjct: 365 RHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDRNDS 424
Query: 286 ALLSLLMFLETLVG-ADDVRPIIKQKY 311
LL L+ FLE LV +DVRP +++++
Sbjct: 425 ELLKLVPFLEKLVELNEDVRPHVRERF 451
>sp|Q5F3Z7|CTSL2_CHICK CTD small phosphatase-like protein 2 OS=Gallus gallus GN=CTDSPL2
PE=2 SV=2
Length = 466
Score = 182 bits (461), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 136/209 (65%), Gaps = 4/209 (1%)
Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
D E ++PY + L + + P PL+ P +LVLDLDETLVH S + +D
Sbjct: 251 DWEVFDPYYFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 308
Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
A +FP+ + + V+VR RP+ FLE ++ ++++++FTA + +YA +LL+ILDP +
Sbjct: 309 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKQ 368
Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPS 283
L+ R++R+ CV G Y+KDL ILGRDL++ I+DN+PQ F Q+ NGIPIESWF D +
Sbjct: 369 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKN 428
Query: 284 DSALLSLLMFLETLVG-ADDVRPIIKQKY 311
D+ LL L+ FLE LV +DVRP I+ ++
Sbjct: 429 DNELLKLIPFLEKLVELNEDVRPHIRDRF 457
>sp|Q801R4|CTL2A_XENLA CTD small phosphatase-like protein 2-A OS=Xenopus laevis
GN=ctdspl2-a PE=2 SV=1
Length = 466
Score = 181 bits (459), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 135/209 (64%), Gaps = 4/209 (1%)
Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
D E ++PY + L + + P PL+ P +LVLDLDETLVH S + +D
Sbjct: 251 DWEVFDPYFFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 308
Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
A +FP+ + + V+VR RP+ FLE ++ ++++++FTA + +YA +LL+ILDP +
Sbjct: 309 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKR 368
Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPS 283
L+ R++R+ CV G Y+KDL ILGRDL++ I+DN+PQ F Q+ NGIPIESWF D +
Sbjct: 369 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKN 428
Query: 284 DSALLSLLMFLETLVG-ADDVRPIIKQKY 311
D LL L+ FLE LV +DVRP ++ ++
Sbjct: 429 DKELLKLVPFLENLVELNEDVRPHVRDRF 457
>sp|Q66KM5|CTSL2_XENTR CTD small phosphatase-like protein 2 OS=Xenopus tropicalis
GN=ctdspl2 PE=2 SV=1
Length = 466
Score = 181 bits (458), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 135/209 (64%), Gaps = 4/209 (1%)
Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
D E ++PY + L + + P PL+ P +LVLDLDETLVH S + +D
Sbjct: 251 DWEVFDPYYFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 308
Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
A +FP+ + + V+VR RP+ FLE ++ ++++++FTA + +YA +LL+ILDP +
Sbjct: 309 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKR 368
Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPS 283
L+ R++R+ CV G Y+KDL ILGRDL++ I+DN+PQ F Q+ NGIPIESWF D +
Sbjct: 369 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKN 428
Query: 284 DSALLSLLMFLETLVG-ADDVRPIIKQKY 311
D LL L+ FLE LV +DVRP I+ ++
Sbjct: 429 DKELLKLVPFLENLVELNEDVRPHIRDRF 457
>sp|Q3KQB6|CTL2B_XENLA CTD small phosphatase-like protein 2-B OS=Xenopus laevis
GN=ctdspl2-b PE=2 SV=1
Length = 466
Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 135/209 (64%), Gaps = 4/209 (1%)
Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
D E ++PY + L + + P PL+ P +LVLDLDETLVH S + +D
Sbjct: 251 DWEVFDPYFFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 308
Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
A +FP+ + + V+VR RP+ FLE ++ ++++++FTA + +YA +LL+ILDP +
Sbjct: 309 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKR 368
Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPS 283
L+ R++R+ CV G Y+KDL ILGRDL++ I+DN+PQ F Q+ NGIPIESWF D +
Sbjct: 369 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKN 428
Query: 284 DSALLSLLMFLETLVG-ADDVRPIIKQKY 311
D LL L+ FL+ LV +DVRP I+ ++
Sbjct: 429 DKELLKLVPFLQKLVELNEDVRPHIRDRF 457
>sp|Q9N4V4|SCPL3_CAEEL CTD small phosphatase-like protein 3 OS=Caenorhabditis elegans
GN=scpl-3 PE=3 SV=1
Length = 287
Score = 166 bits (419), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 119/201 (59%), Gaps = 15/201 (7%)
Query: 120 NLPQIAPSYWPRTPLREPIAGLPI--------TLVLDLDETLVHSSFDNCKDADFSFPIH 171
NLP + R P LP+ TLVLDLDETLVH S +A FP+
Sbjct: 40 NLPPLTEEIMSRCP------ALPVKTRSTPEYTLVLDLDETLVHCSLTPLDNATMVFPVV 93
Query: 172 SKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYR 231
+ V+VR RP+L FL +A F+++IFTA + +YA +L DILDP + I R++R
Sbjct: 94 FQNITYQVYVRLRPHLRTFLSRMAKTFEIIIFTASKKVYANKLCDILDPRKNHIRHRLFR 153
Query: 232 DSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLL 291
+ CV G Y+KDLTILGRD ++ I+DN Q F Q+DNGIPIESWF D +D+ LL L
Sbjct: 154 EHCVCVFGNYVKDLTILGRDPSKTMILDNAVQSFAYQLDNGIPIESWFHDRNDTELLKLC 213
Query: 292 MFLETL-VGADDVRPIIKQKY 311
FLE + DVR I++ KY
Sbjct: 214 SFLEAIPTLGRDVREILRHKY 234
>sp|Q9GZU7|CTDS1_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 1 OS=Homo sapiens GN=CTDSP1 PE=1 SV=1
Length = 261
Score = 144 bits (363), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 105/167 (62%), Gaps = 1/167 (0%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
I +V+DLDETLVHSSF +ADF P+ V V+V +RP++ FL+ + +F+ V+
Sbjct: 91 ICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVL 150
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
FTA + YA + D+LD R++R+SCVF G Y+KDL+ LGRDL R+ I+DN+P
Sbjct: 151 FTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSP 209
Query: 263 QVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
+ DN +P+ SWF + SD+ L LL F E L DDV +++Q
Sbjct: 210 ASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQLSRVDDVYSVLRQ 256
>sp|P58466|CTDS1_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 1 OS=Mus musculus GN=Ctdsp1 PE=1 SV=1
Length = 261
Score = 144 bits (363), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 105/167 (62%), Gaps = 1/167 (0%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
I +V+DLDETLVHSSF +ADF P+ V V+V +RP++ FL+ + +F+ V+
Sbjct: 91 ICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVL 150
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
FTA + YA + D+LD R++R+SCVF G Y+KDL+ LGRDL R+ I+DN+P
Sbjct: 151 FTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSP 209
Query: 263 QVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
+ DN +P+ SWF + SD+ L LL F E L DDV +++Q
Sbjct: 210 ASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQLSRVDDVYSVLRQ 256
>sp|O14595|CTDS2_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 2 OS=Homo sapiens GN=CTDSP2 PE=1 SV=2
Length = 271
Score = 142 bits (357), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 104/161 (64%), Gaps = 1/161 (0%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
I +V+DLDETLVHSSF +ADF PI + V+V +RPY+ FL + +F+ V+
Sbjct: 102 ICVVIDLDETLVHSSFKPINNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVL 161
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
FTA + YA + D+LD + R++R+SCVF G Y+KDL+ LGRDL + I+DN+P
Sbjct: 162 FTASLAKYADPVTDLLD-RCGVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSP 220
Query: 263 QVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDV 303
+ +N +P++SWF D +D+ LL+L+ E L GA+DV
Sbjct: 221 ASYIFHPENAVPVQSWFDDMADTELLNLIPIFEELSGAEDV 261
>sp|Q8BX07|CTDS2_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 2 OS=Mus musculus GN=Ctdsp2 PE=2 SV=1
Length = 270
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 103/161 (63%), Gaps = 1/161 (0%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
I +V+DLDETLVHSSF +ADF P+ + V+V +RPY+ FL + +F+ V+
Sbjct: 101 ICVVIDLDETLVHSSFKPINNADFIVPVEIEGTTHQVYVLKRPYVDEFLRRMGELFECVL 160
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
FTA + YA + D+LD + R++R++CVF G Y+KDL+ LGRDL + I+DN+P
Sbjct: 161 FTASLAKYADPVTDLLD-RCGVFRARLFREACVFHQGCYVKDLSRLGRDLRKTVILDNSP 219
Query: 263 QVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDV 303
+ +N +P++SWF D +D+ LL+L+ E L G DDV
Sbjct: 220 ASYIFHPENAVPVQSWFDDMADTELLNLIPVFEELSGTDDV 260
>sp|P58465|CTDSL_MOUSE CTD small phosphatase-like protein OS=Mus musculus GN=Ctdspl PE=2
SV=3
Length = 276
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 1/159 (0%)
Query: 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFT 204
+V+DLDETLVHSSF +ADF P+ + V+V +RP++ FL+ + +F+ V+FT
Sbjct: 109 VVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFT 168
Query: 205 AGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQV 264
A + YA + D+LD + R++R+SCVF G Y+KDL+ LGR+L+++ IVDN+P
Sbjct: 169 ASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPAS 227
Query: 265 FQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDV 303
+ +N +P++SWF D +D+ LL L+ F E L DDV
Sbjct: 228 YIFHPENAVPVQSWFDDMTDTELLDLIPFFEGLSREDDV 266
>sp|O15194|CTDSL_HUMAN CTD small phosphatase-like protein OS=Homo sapiens GN=CTDSPL PE=1
SV=2
Length = 276
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 107/165 (64%), Gaps = 1/165 (0%)
Query: 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFT 204
+V+DLDETLVHSSF +ADF P+ + V+V +RP++ FL+ + +F+ V+FT
Sbjct: 109 VVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFT 168
Query: 205 AGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQV 264
A + YA + D+LD + R++R+SCVF G Y+KDL+ LGR+L+++ IVDN+P
Sbjct: 169 ASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPAS 227
Query: 265 FQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
+ +N +P++SWF D +D+ LL L+ F E L DDV ++ +
Sbjct: 228 YIFHPENAVPVQSWFDDMTDTELLDLIPFFEGLSREDDVYSMLHR 272
>sp|Q9PTJ6|CTDSL_CHICK CTD small phosphatase-like protein OS=Gallus gallus GN=NFI1 PE=2
SV=2
Length = 275
Score = 138 bits (347), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 107/165 (64%), Gaps = 1/165 (0%)
Query: 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFT 204
+V+DLDETLVHSSF +ADF P+ + V+V +RP++ FL+ + +F+ V+FT
Sbjct: 108 VVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGELFECVLFT 167
Query: 205 AGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQV 264
A + YA + D+LD + R++R+SCVF G Y+KDL+ LGR+L+++ IVDN+P
Sbjct: 168 ASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPAS 226
Query: 265 FQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
+ +N +P++SWF D +D+ LL L+ F E L ++V ++ +
Sbjct: 227 YIFHPENAVPVQSWFDDMTDTELLDLIPFFEGLSKEEEVYSMLHK 271
>sp|Q07949|PSR2_YEAST Probable phosphatase PSR2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PSR2 PE=1 SV=1
Length = 397
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
Query: 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFT 204
L+LDLDETLVHSSF ADF P+ +V V+V +RP + FL V+ +++VV+FT
Sbjct: 230 LILDLDETLVHSSFKYMHSADFVLPVEIDDQVHNVYVIKRPGVDEFLNRVSQLYEVVVFT 289
Query: 205 AGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQV 264
A S YA LLD LDPN T I R++R++C +G Y+K+L+ +GR L+ I+DN+P
Sbjct: 290 ASVSRYANPLLDTLDPNGT-IHHRLFREACYNYEGNYIKNLSQIGRPLSETIILDNSPAS 348
Query: 265 FQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGAD 301
+ + +PI SWF D D+ LL ++ LE L +
Sbjct: 349 YIFHPQHAVPISSWFSDTHDNELLDIIPLLEDLSSGN 385
>sp|Q5U3T3|CNEPB_DANRE CTD nuclear envelope phosphatase 1B OS=Danio rerio GN=ctdnep1b PE=2
SV=1
Length = 245
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 101/173 (58%), Gaps = 8/173 (4%)
Query: 145 LVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS 196
LVLDLDETL+HS D DF + FV +RP++ FLE V+
Sbjct: 65 LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQ 124
Query: 197 MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIA 256
+++V+FTA IY + D LD N+ ++ +R YR C G Y+KDL+++ DL+ +
Sbjct: 125 WYELVVFTASMEIYGSAVADKLDNNKAILKRRYYRQHCTLDSGSYIKDLSVVHDDLSSVV 184
Query: 257 IVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
I+DN+P ++ DN IPI+SWF DPSD+ALL+LL L+ L DVR ++ +
Sbjct: 185 ILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFPADVRSVLSR 237
>sp|Q5U395|CNEPA_DANRE CTD nuclear envelope phosphatase 1A OS=Danio rerio GN=ctdnep1a PE=2
SV=1
Length = 245
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 101/173 (58%), Gaps = 8/173 (4%)
Query: 145 LVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS 196
LVLDLDETL+HS D DF + FV +RP++ FLE V+
Sbjct: 65 LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQ 124
Query: 197 MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIA 256
+++V+FTA IY + D LD N+ ++ +R YR C G Y+KDL+++ DL+ I
Sbjct: 125 WYELVVFTASMEIYGSAVADKLDNNRGILKRRYYRQHCTLDLGSYIKDLSVVHSDLSSIV 184
Query: 257 IVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
I+DN+P ++ DN IPI+SWF DPSD+ALL+LL L+ L DVR ++ +
Sbjct: 185 ILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTSDVRSVLSR 237
>sp|Q07800|PSR1_YEAST Phosphatase PSR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PSR1 PE=1 SV=1
Length = 427
Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 104/173 (60%), Gaps = 1/173 (0%)
Query: 125 APSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQR 184
AP Y P ++ L+LDLDETLVHSSF + ADF + +V V+V +R
Sbjct: 240 APGYNTLLPPQDESTKGKKCLILDLDETLVHSSFKYLRSADFVLSVEIDDQVHNVYVIKR 299
Query: 185 PYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKD 244
P + FLE V +F+VV+FTA S Y LLDILD ++ +I R++R++C +G Y+K+
Sbjct: 300 PGVEEFLERVGKLFEVVVFTASVSRYGDPLLDILDTDK-VIHHRLFREACYNYEGNYIKN 358
Query: 245 LTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETL 297
L+ +GR L+ I I+DN+P + + IPI SWF D D+ LL ++ LE L
Sbjct: 359 LSQIGRPLSDIIILDNSPASYIFHPQHAIPISSWFSDTHDNELLDIIPLLEDL 411
>sp|Q8JIL9|CNEP1_XENLA CTD nuclear envelope phosphatase 1 OS=Xenopus laevis GN=ctdnep1
PE=1 SV=1
Length = 244
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 101/174 (58%), Gaps = 8/174 (4%)
Query: 144 TLVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA 195
LVLDLDETL+HS D DF + FV +RP++ FLE V+
Sbjct: 63 VLVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVS 122
Query: 196 SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARI 255
+++V+FTA IY + D LD N+ ++ +R YR C G Y+KDL+++ DL+ +
Sbjct: 123 QWYELVVFTASMEIYGSAVADKLDNNKGVLRRRFYRQHCTLELGSYIKDLSVVHSDLSSV 182
Query: 256 AIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
I+DN+P ++ DN IPI+SWF DPSD+ALL+LL L+ L DVR ++ +
Sbjct: 183 VILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTADVRSVLSR 236
>sp|Q28HW9|CNEP1_XENTR CTD nuclear envelope phosphatase 1 OS=Xenopus tropicalis GN=ctdnep1
PE=2 SV=1
Length = 244
Score = 134 bits (338), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 101/174 (58%), Gaps = 8/174 (4%)
Query: 144 TLVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA 195
LVLDLDETL+HS D DF + FV +RP++ FLE V+
Sbjct: 63 VLVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVS 122
Query: 196 SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARI 255
+++V+FTA IY + D LD N+ ++ +R YR C G Y+KDL+++ DL+ +
Sbjct: 123 QWYELVVFTASMEIYGSAVADKLDNNRGVLRRRFYRQHCTLELGSYIKDLSVVHSDLSSV 182
Query: 256 AIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
I+DN+P ++ DN IPI+SWF DPSD+ALL+LL L+ L DVR ++ +
Sbjct: 183 VILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTADVRSVLSR 236
>sp|Q1RMV9|CNEP1_BOVIN CTD nuclear envelope phosphatase 1 OS=Bos taurus GN=CTDNEP1 PE=2
SV=1
Length = 244
Score = 134 bits (338), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 102/173 (58%), Gaps = 8/173 (4%)
Query: 145 LVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS 196
LVLDLDETL+HS D DF + FV +RP++ FLE V+
Sbjct: 64 LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQ 123
Query: 197 MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIA 256
+++V+FTA IY + D LD +++++ +R YR C G Y+KDL+++ DL+ I
Sbjct: 124 WYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIV 183
Query: 257 IVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
I+DN+P ++ DN IPI+SWF DPSD+ALL+LL L+ L DVR ++ +
Sbjct: 184 ILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTADVRSVLSR 236
>sp|O95476|CNEP1_HUMAN CTD nuclear envelope phosphatase 1 OS=Homo sapiens GN=CTDNEP1 PE=1
SV=2
Length = 244
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 102/173 (58%), Gaps = 8/173 (4%)
Query: 145 LVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS 196
LVLDLDETL+HS D DF + FV +RP++ FLE V+
Sbjct: 64 LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQ 123
Query: 197 MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIA 256
+++V+FTA IY + D LD +++++ +R YR C G Y+KDL+++ DL+ I
Sbjct: 124 WYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIV 183
Query: 257 IVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
I+DN+P ++ DN IPI+SWF DPSD+ALL+LL L+ L DVR ++ +
Sbjct: 184 ILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTADVRSVLSR 236
>sp|Q3B7T6|CNEP1_RAT CTD nuclear envelope phosphatase 1 OS=Rattus norvegicus GN=Ctdnep1
PE=2 SV=2
Length = 244
Score = 134 bits (337), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 102/173 (58%), Gaps = 8/173 (4%)
Query: 145 LVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS 196
LVLDLDETL+HS D DF + FV +RP++ FLE V+
Sbjct: 64 LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQ 123
Query: 197 MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIA 256
+++V+FTA IY + D LD +++++ +R YR C G Y+KDL+++ DL+ I
Sbjct: 124 WYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIV 183
Query: 257 IVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
I+DN+P ++ DN IPI+SWF DPSD+ALL+LL L+ L DVR ++ +
Sbjct: 184 ILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTADVRSVLSR 236
>sp|Q3TP92|CNEP1_MOUSE CTD nuclear envelope phosphatase 1 OS=Mus musculus GN=Ctdnep1 PE=2
SV=2
Length = 244
Score = 134 bits (337), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 102/173 (58%), Gaps = 8/173 (4%)
Query: 145 LVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS 196
LVLDLDETL+HS D DF + FV +RP++ FLE V+
Sbjct: 64 LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQ 123
Query: 197 MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIA 256
+++V+FTA IY + D LD +++++ +R YR C G Y+KDL+++ DL+ I
Sbjct: 124 WYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIV 183
Query: 257 IVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
I+DN+P ++ DN IPI+SWF DPSD+ALL+LL L+ L DVR ++ +
Sbjct: 184 ILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTADVRSVLSR 236
>sp|Q9XYL0|CTDS_DICDI Probable C-terminal domain small phosphatase OS=Dictyostelium
discoideum GN=fcpA PE=3 SV=1
Length = 306
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 106/166 (63%), Gaps = 1/166 (0%)
Query: 144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIF 203
TLVLDLDETLVHSSF + DF P+ + + V+V +RP++ FL A+A F++V+F
Sbjct: 138 TLVLDLDETLVHSSFKPVHNPDFIVPVEIEGTIHQVYVVKRPFVDDFLRAIAEKFEIVVF 197
Query: 204 TAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ 263
TA + YA +LD LD + +I R++R+SC G Y+KDL+ LGRDL IVDN+P
Sbjct: 198 TASLAKYADPVLDFLDTGR-VIHYRLFRESCHNHKGNYVKDLSRLGRDLKSTIIVDNSPS 256
Query: 264 VFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
+ +N IPI+SWF D D LL LL L+ L+ +DVR ++ +
Sbjct: 257 SYLFHPENAIPIDSWFDDKDDRELLDLLPLLDDLIKVEDVRLVLDE 302
>sp|Q29I63|CNEP1_DROPS CTD nuclear envelope phosphatase 1 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=l(1)G0269 PE=3 SV=1
Length = 243
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 100/174 (57%), Gaps = 8/174 (4%)
Query: 144 TLVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA 195
TLVLDLDETL+HS + DF+ + FV +RP++ FL+ V+
Sbjct: 62 TLVLDLDETLIHSHHNAMPRNTVKPGTPHDFTVKVTIDRNPVRFFVHKRPHVDYFLDVVS 121
Query: 196 SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARI 255
+D+V+FTA IY + D LD + ++ +R YR C G Y KDL+ + DL RI
Sbjct: 122 QWYDLVVFTASMEIYGAAVADKLDNGRNILRRRYYRQHCTPDYGSYTKDLSAICSDLNRI 181
Query: 256 AIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
I+DN+P ++ +N IPI+SWF DP D+ALLSLL L+ L +DVR ++ +
Sbjct: 182 FIIDNSPGAYRCFPNNAIPIKSWFSDPMDTALLSLLPMLDALRFTNDVRSVLSR 235
>sp|Q9VRG7|CNEP1_DROME CTD nuclear envelope phosphatase 1 homolog OS=Drosophila
melanogaster GN=l(1)G0269 PE=2 SV=1
Length = 243
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 100/174 (57%), Gaps = 8/174 (4%)
Query: 144 TLVLDLDETLVHSSFDNCKD--------ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA 195
TLVLDLDETL+HS + DF+ + FV +RP++ FL+ V+
Sbjct: 62 TLVLDLDETLIHSHHNAMPRNTVKPGTPHDFTVKVTIDRNPVRFFVHKRPHVDYFLDVVS 121
Query: 196 SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARI 255
+D+V+FTA IY + D LD + ++ +R YR C G Y KDL+ + DL RI
Sbjct: 122 QWYDLVVFTASMEIYGAAVADKLDNGRNILRRRYYRQHCTPDYGSYTKDLSAICSDLNRI 181
Query: 256 AIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
I+DN+P ++ +N IPI+SWF DP D+ALLSLL L+ L +DVR ++ +
Sbjct: 182 FIIDNSPGAYRCFPNNAIPIKSWFSDPMDTALLSLLPMLDALRFTNDVRSVLSR 235
>sp|Q09695|YA22_SCHPO Uncharacterized protein C2F7.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2F7.02c PE=1 SV=1
Length = 325
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Query: 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFT 204
L+LDLDETLVHSSF + ADF I V V +RP + FL+ + MF++V+FT
Sbjct: 160 LILDLDETLVHSSFKYIEPADFVVSIEIDGLQHDVRVVKRPGVDEFLKKMGDMFEIVVFT 219
Query: 205 AGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQV 264
A + YA +LD+LD + +I R++R++C +G ++KDL+ LGR+L I+DN+P
Sbjct: 220 ASLAKYADPVLDMLD-HSHVIRHRLFREACCNYEGNFVKDLSQLGRNLEDSIIIDNSPSS 278
Query: 265 FQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPII 307
+ + +PI SWF D D L+ L+ FLE L DV ++
Sbjct: 279 YIFHPSHAVPISSWFNDMHDMELIDLIPFLEHLARVPDVSTVL 321
>sp|O59718|NEM1_SCHPO Nuclear envelope morphology protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nem1 PE=3 SV=1
Length = 476
Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 144 TLVLDLDETLVHS-SFDNCKDADFSFPIHSKMEVQTVF-VRQRPYLHMFLEAVASMFDVV 201
TLVLDLDETL+HS S + + +H E ++ + +RP+L FL V+ F ++
Sbjct: 305 TLVLDLDETLIHSVSRGSRTTSGQPIEVHVPGEHPILYYIHKRPHLDYFLSNVSQWFRLI 364
Query: 202 IFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNT 261
+FTA YA ++D L+ ++ + +R YR C D ++KD++I L+RI I+DN+
Sbjct: 365 LFTASVQPYADPIIDYLERDKKIFAKRYYRQHCALVDSSFVKDISICNIHLSRIMIIDNS 424
Query: 262 PQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPII 307
P + +N IPIE W DPSD LL+LL FL L DVR ++
Sbjct: 425 PASYNAHKENAIPIEGWISDPSDVDLLNLLSFLHALQYVHDVRDLL 470
>sp|Q61C05|CNEP1_CAEBR CTD nuclear envelope phosphatase 1 homolog OS=Caenorhabditis
briggsae GN=scpl-2 PE=3 SV=1
Length = 246
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 96/173 (55%), Gaps = 8/173 (4%)
Query: 145 LVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS 196
LVLDLDETL+HS D +DF+ + V +RP++ FL V+
Sbjct: 60 LVLDLDETLIHSHHDGVLRQTVKPGTPSDFTIRVVIDRHPVKFSVHERPHVDYFLTVVSQ 119
Query: 197 MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIA 256
+++V+FTA +Y + D LD + ++ +R +R C G Y KDL+ + DL+ I
Sbjct: 120 WYELVVFTASMEVYGSSVADKLDRGRGILKRRYFRQHCTMEVGGYTKDLSAIHPDLSSIC 179
Query: 257 IVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
I+DN+P ++ N IPI SWF DP+D+ LL+LL FL+ L DVR ++ +
Sbjct: 180 ILDNSPGAYRKFPHNAIPIPSWFSDPNDTCLLNLLPFLDALRFTSDVRSVLSR 232
>sp|Q20432|CNEP1_CAEEL CTD nuclear envelope phosphatase 1 homolog OS=Caenorhabditis
elegans GN=scpl-2 PE=3 SV=1
Length = 246
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 96/173 (55%), Gaps = 8/173 (4%)
Query: 145 LVLDLDETLVHSSFDNC--------KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS 196
LVLDLDETL+HS D +DF+ + V +RP++ FL V+
Sbjct: 60 LVLDLDETLIHSHHDGVLRQTVKPGTPSDFTIRVVIDRHPVKFSVHERPHVDYFLSVVSQ 119
Query: 197 MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIA 256
+++V+FTA +Y + D LD + ++ +R +R C G Y KDL+ + DL+ I
Sbjct: 120 WYELVVFTASMEVYGTSVADRLDRGRGILKRRYFRQHCTMEVGGYTKDLSAIHPDLSSIC 179
Query: 257 IVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
I+DN+P ++ N IPI SWF DP+D+ LL+LL FL+ L DVR ++ +
Sbjct: 180 ILDNSPGAYRKFPHNAIPIPSWFSDPNDTCLLNLLPFLDALRFTSDVRSVLSR 232
>sp|P38757|NEM1_YEAST Nuclear envelope morphology protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NEM1 PE=1 SV=1
Length = 446
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 106/188 (56%), Gaps = 18/188 (9%)
Query: 145 LVLDLDETLVHSSFDNCKDADFS--FPIHSKMEVQTV----FVRQRPYLHMFLEAVASMF 198
LV+DLDETL+HS+ + ++ S + K + + F+ +RPY +FL V+ +
Sbjct: 254 LVIDLDETLIHSASRSTTHSNSSQGHLVEVKFGLSGIRTLYFIHKRPYCDLFLTKVSKWY 313
Query: 199 DVVIFTAGQSIYAGQLLDILDPN-QTLIGQRVYRDSCVFADG-EYLKDLTIL-------- 248
D++IFTA YA ++D L+ + + +R YR CV DG Y+KDL+I+
Sbjct: 314 DLIIFTASMKEYADPVIDWLESSFPSSFSKRYYRSDCVLRDGVGYIKDLSIVKDSEENGK 373
Query: 249 --GRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPI 306
L + I+DN+P + + VDN I +E W DP+D+ LL+LL FLE + + DVR I
Sbjct: 374 GSSSSLDDVIIIDNSPVSYAMNVDNAIQVEGWISDPTDTDLLNLLPFLEAMRYSTDVRNI 433
Query: 307 IKQKYGSQ 314
+ K+G +
Sbjct: 434 LALKHGEK 441
>sp|Q4WI16|TIM50_ASPFU Mitochondrial import inner membrane translocase subunit tim50
OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 /
CBS 101355 / FGSC A1100) GN=tim50 PE=3 SV=2
Length = 501
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 133 PLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLE 192
P +P P TLVL L++ LVHS + + +RP + FL
Sbjct: 213 PDEDPNLRQPYTLVLSLEDLLVHSEWSRE---------------HGWRIAKRPGVDYFLR 257
Query: 193 AVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDL 252
+ +++V+FT+ S+ A Q+L LDP + +I ++R++ + DGEY+KDL+ L RDL
Sbjct: 258 YLNQYYELVLFTSVPSMMADQVLRKLDPYR-IIRWPLFREATRYKDGEYIKDLSYLNRDL 316
Query: 253 ARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETL--VGADDVRPIIKQK 310
+++ ++D + +LQ +N I ++ W GDP D L++L+ FLE + +G +DVRP++K
Sbjct: 317 SKVILIDTKEEHARLQPENAIILDKWLGDPKDKNLVALIPFLEYIAGMGVEDVRPVLKSF 376
Query: 311 YGS 313
G+
Sbjct: 377 EGT 379
>sp|Q3SZB3|TIM50_BOVIN Mitochondrial import inner membrane translocase subunit TIM50
OS=Bos taurus GN=TIMM50 PE=2 SV=1
Length = 355
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 106/201 (52%), Gaps = 21/201 (10%)
Query: 112 YLYFMGWQNL--PQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFP 169
Y YF ++ + +P P PLREP P TLVL+L L+H + F
Sbjct: 118 YKYFKDYRQMIIEPTSPCLLP-DPLREPYYQPPYTLVLELTGVLLHPEWSLATGWRF--- 173
Query: 170 IHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRV 229
++RP + + +A ++++VIFT+ + A L+D +DP+ I R+
Sbjct: 174 ------------KKRPGIETLFQQLAPLYEIVIFTSETGMTAFPLIDSVDPH-GFISYRL 220
Query: 230 YRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLS 289
+RD+ + DG ++KD++ L RD AR+ +VD + F+LQ NG+ + W G+ D LL
Sbjct: 221 FRDATRYMDGHHVKDISCLNRDPARVVVVDCKKEAFRLQPYNGVALRPWDGNSDDRVLLD 280
Query: 290 LLMFLETLV--GADDVRPIIK 308
L FL+T+ G +DVR +++
Sbjct: 281 LSAFLKTIALNGVEDVRTVLE 301
>sp|Q5B4P0|TIM50_EMENI Mitochondrial import inner membrane translocase subunit tim50
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=tim50 PE=3 SV=1
Length = 532
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 101/178 (56%), Gaps = 18/178 (10%)
Query: 133 PLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLE 192
P +P P TLVL L++ LVHS + V +RP + FL
Sbjct: 242 PDEDPNLRQPYTLVLSLEDLLVHSEWSR---------------EHGWRVAKRPGVDYFLR 286
Query: 193 AVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDL 252
+ +++V+FT+ S+ A Q+L LDP + +I ++R++ + DGEY+KDL+ L RDL
Sbjct: 287 YLNQYYELVLFTSVPSMMADQVLRKLDPYR-IIRWPLFREATRYKDGEYIKDLSYLNRDL 345
Query: 253 ARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETL--VGADDVRPIIK 308
+++ ++D + +LQ +N I ++ W G+P D L++L+ FLE L +G DDVR ++K
Sbjct: 346 SKVILIDTKEEHARLQPENAIILDKWNGNPKDKTLVALIPFLEYLAGMGVDDVRTVLK 403
>sp|Q6FRX4|TIM50_CANGA Mitochondrial import inner membrane translocase subunit TIM50
OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=TIM50 PE=3 SV=1
Length = 485
Score = 104 bits (260), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 100/176 (56%), Gaps = 18/176 (10%)
Query: 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVV 201
P+TLV+ L++ LVHS +D K +T +RP FL ++ +++V
Sbjct: 197 PLTLVITLEDFLVHSEWD------------QKHGWRTA---KRPGADYFLGYLSQYYEIV 241
Query: 202 IFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNT 261
+F++ +YA ++ + +DP I ++++ CV+ DG ++KDL+ L RDL ++ I+D
Sbjct: 242 LFSSNYMMYAEKIAEKMDPIHAFISYNLFKEHCVYKDGVHIKDLSKLNRDLKKVMIIDTD 301
Query: 262 PQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVG--ADDVRPIIKQKYGSQE 315
++LQ +N IP++ W G +D LL L+ FLE + +DVRPI+K + +E
Sbjct: 302 ENSYKLQPENAIPMDPWDG-KADDKLLRLIPFLEYMATQQVEDVRPILKSYHNKRE 356
>sp|Q3ZCQ8|TIM50_HUMAN Mitochondrial import inner membrane translocase subunit TIM50
OS=Homo sapiens GN=TIMM50 PE=1 SV=2
Length = 353
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 106/202 (52%), Gaps = 21/202 (10%)
Query: 112 YLYFMGWQNL--PQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFP 169
Y YF ++ + +P P PL+EP P TLVL+L L+H + F
Sbjct: 116 YKYFKDYRQMIIEPTSPCLLP-DPLQEPYYQPPYTLVLELTGVLLHPEWSLATGWRF--- 171
Query: 170 IHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRV 229
++RP + + +A ++++VIFT+ + A L+D +DP+ I R+
Sbjct: 172 ------------KKRPGIETLFQQLAPLYEIVIFTSETGMTAFPLIDSVDPH-GFISYRL 218
Query: 230 YRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLS 289
+RD+ + DG ++KD++ L RD AR+ +VD + F+LQ NG+ + W G+ D LL
Sbjct: 219 FRDATRYMDGHHVKDISCLNRDPARVVVVDCKKEAFRLQPYNGVALRPWDGNSDDRVLLD 278
Query: 290 LLMFLETLV--GADDVRPIIKQ 309
L FL+T+ G +DVR +++
Sbjct: 279 LSAFLKTIALNGVEDVRTVLEH 300
>sp|Q4PEW9|TIM50_USTMA Mitochondrial import inner membrane translocase subunit TIM50
OS=Ustilago maydis (strain 521 / FGSC 9021) GN=TIM50
PE=3 SV=1
Length = 493
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 92/175 (52%), Gaps = 17/175 (9%)
Query: 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVV 201
P T+V+D+D+ LVHS + + +RP L FL ++ +++V
Sbjct: 220 PFTMVIDIDDLLVHSEWSREHGWRTA---------------KRPGLDHFLGYLSQFYEIV 264
Query: 202 IFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNT 261
+FT AG +++ LDP++ I ++R+SC DG+ +KDL L RDL+++ +VD
Sbjct: 265 LFTTQPFFTAGPIIEKLDPDRRFITYTLFRESCRTVDGKLVKDLNHLNRDLSKVVVVDTN 324
Query: 262 PQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLET--LVGADDVRPIIKQKYGSQ 314
P F L +NGI ++ W G+ D L+ L+ F E + DDVR IK G+
Sbjct: 325 PDSFHLHPENGILVKPWKGEREDRELIGLIPFFEAIGIYNIDDVRNTIKAYTGTH 379
>sp|Q5RAJ8|TIM50_PONAB Mitochondrial import inner membrane translocase subunit TIM50
OS=Pongo abelii GN=TIMM50 PE=2 SV=1
Length = 353
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 106/202 (52%), Gaps = 21/202 (10%)
Query: 112 YLYFMGWQNL--PQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFP 169
Y YF ++ + +P P PL+EP P TLVL+L L+H + F
Sbjct: 116 YKYFKDYRQMIIEPTSPCLLP-DPLQEPYYQPPYTLVLELTGVLLHLEWSLATGWRF--- 171
Query: 170 IHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRV 229
++RP + + +A ++++VIFT+ + A L+D +DP+ I R+
Sbjct: 172 ------------KKRPGIETLFQQLAPLYEIVIFTSETGMTAFPLIDSVDPH-GFISYRL 218
Query: 230 YRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLS 289
+RD+ + DG ++KD++ L RD AR+ +VD + F+LQ NG+ + W G+ D LL
Sbjct: 219 FRDATRYMDGHHVKDISCLNRDPARVVVVDCKKEAFRLQPYNGVALRPWDGNSDDRVLLD 278
Query: 290 LLMFLETLV--GADDVRPIIKQ 309
L FL+T+ G +DVR +++
Sbjct: 279 LSAFLKTIALNGVEDVRTVLEH 300
>sp|Q9D880|TIM50_MOUSE Mitochondrial import inner membrane translocase subunit TIM50
OS=Mus musculus GN=Timm50 PE=1 SV=1
Length = 353
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 21/202 (10%)
Query: 112 YLYFMGWQNL--PQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFP 169
Y YF ++ + +P P PLREP P TLVL+L L+H + F
Sbjct: 116 YKYFKDYRQMIIEPTSPCLLP-DPLREPYYQPPYTLVLELTGVLLHPEWSLATGWRF--- 171
Query: 170 IHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRV 229
++RP + + +A ++++VIFT+ + A L+D +DP+ I R+
Sbjct: 172 ------------KKRPGIETLFQQLAPLYEIVIFTSETGMTAFPLIDSVDPH-GFISYRL 218
Query: 230 YRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLS 289
+RD+ + +G ++KD++ L RD AR+ +VD + F+LQ NG+ + W G+ D LL
Sbjct: 219 FRDATRYMEGHHVKDISCLNRDPARVVVVDCKKEAFRLQPFNGVALRPWDGNSDDRVLLD 278
Query: 290 LLMFLETLV--GADDVRPIIKQ 309
L FL+T+ +DVR +++
Sbjct: 279 LSAFLKTIALNQVEDVRTVLEH 300
>sp|O13636|TIM50_SCHPO Mitochondrial import inner membrane translocase subunit tim50
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim50 PE=3 SV=1
Length = 452
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 91/183 (49%), Gaps = 18/183 (9%)
Query: 133 PLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLE 192
PL EP P TLVL LD+ L+HS + +RP L FL
Sbjct: 168 PLPEPY-NRPYTLVLSLDDLLIHSEWTRQ---------------HGWRTAKRPGLDYFLG 211
Query: 193 AVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDL 252
++ ++VVIFT A ++D +DP I + R+S + G+ +KDL+ L RDL
Sbjct: 212 YLSMYYEVVIFTRQYLATAKPIIDKIDPYHVSISAVLTRESSKYEKGKVIKDLSYLNRDL 271
Query: 253 ARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGAD--DVRPIIKQK 310
+R+ ++D P+ + Q DN I + W G+P D L+ L+ LE + D DVRP++K
Sbjct: 272 SRVIMIDTNPESWSKQPDNAIAMAPWTGNPKDKELVGLIPLLEFIAIMDIKDVRPVLKSY 331
Query: 311 YGS 313
G
Sbjct: 332 QGK 334
>sp|Q59W44|TIM50_CANAL Mitochondrial import inner membrane translocase subunit TIM50
OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=TIM50 PE=3 SV=1
Length = 469
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 18/168 (10%)
Query: 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVV 201
P+TLV+ LD+ L+HS++D +RP L FL ++ +++V
Sbjct: 187 PLTLVVTLDDFLIHSNWDTQ---------------HGWRTGKRPGLDYFLGYLSQYYEIV 231
Query: 202 IFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNT 261
+F++ IY+ + ++ LDP I ++R++C + DG+ +KDL++L RDL + ++D
Sbjct: 232 VFSSNSQIYSDKTVNKLDPYHAYISYALFREACRYKDGKLIKDLSLLNRDLGKTVMIDVD 291
Query: 262 PQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVG--ADDVRPII 307
LQ +N I ++ W G P D L+SL+ FLE L DVRPI+
Sbjct: 292 EDSAALQPENSIIVKKWEGQP-DEYLISLIPFLEYLATQPVKDVRPIL 338
>sp|Q02776|TIM50_YEAST Mitochondrial import inner membrane translocase subunit TIM50
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TIM50 PE=1 SV=1
Length = 476
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 95/166 (57%), Gaps = 18/166 (10%)
Query: 144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIF 203
TLV+ L++ LVHS + K +T +RP FL ++ +++V+F
Sbjct: 193 TLVITLEDFLVHSEWSQ------------KHGWRTA---KRPGADYFLGYLSQYYEIVLF 237
Query: 204 TAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ 263
++ +Y+ ++ + LDP + ++++ CV+ DG ++KDL+ L RDL+++ I+D P
Sbjct: 238 SSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDLSKVIIIDTDPN 297
Query: 264 VFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVG--ADDVRPII 307
++LQ +N IP+E W G+ +D L+ L+ FLE L DVRPI+
Sbjct: 298 SYKLQPENAIPMEPWNGE-ADDKLVRLIPFLEYLATQQTKDVRPIL 342
>sp|Q6NWD4|TIM50_DANRE Mitochondrial import inner membrane translocase subunit TIM50
OS=Danio rerio GN=timm50 PE=2 SV=2
Length = 387
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 108/211 (51%), Gaps = 24/211 (11%)
Query: 107 EYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADF 166
+Y+ Y + P++ P PLREP P TLVL+L + L+H + F
Sbjct: 152 KYFKDYRQMIIEPTSPKLLPD-----PLREPYYQPPYTLVLELTDVLLHPEWSLATGWRF 206
Query: 167 SFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIG 226
++RP + + +A ++++VIFT+ + A L+D +DP Q +
Sbjct: 207 ---------------KKRPGIDYLFQQLAPLYEIVIFTSETGMTAYPLIDSIDP-QGFVM 250
Query: 227 QRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSA 286
R++RD+ + +G ++KD++ L RD +++ +VD + F LQ NG+ + W G+ D
Sbjct: 251 YRLFRDATRYMEGHHVKDVSCLNRDTSKVIVVDCKREAFGLQPFNGLALCKWDGNSEDRT 310
Query: 287 LLSLLMFLETLV--GADDVRPIIKQKYGSQE 315
L L FL+T+ G +DVR ++ + Y +E
Sbjct: 311 LYDLAAFLKTIATSGVEDVRSVL-ENYAHEE 340
>sp|Q75A73|TIM50_ASHGO Mitochondrial import inner membrane translocase subunit TIM50
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=TIM50 PE=3 SV=2
Length = 476
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 93/168 (55%), Gaps = 18/168 (10%)
Query: 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVV 201
P+TLVL L++ VHS + + +RP FL ++ +++V
Sbjct: 190 PLTLVLPLEDFFVHSEW---------------TQQHGWRTAKRPGADYFLGYLSQYYEIV 234
Query: 202 IFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNT 261
+F++ +Y+ ++++ LDP + I +++D CV+ DG ++KDL+ L RDL + I+D
Sbjct: 235 LFSSNYMVYSEKVVEKLDPIRAFITYNLFKDHCVYKDGIHIKDLSHLNRDLGKTLIIDTD 294
Query: 262 PQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGA--DDVRPII 307
P +LQ++N I E W G +D ALL + FLE LV +DVRPI+
Sbjct: 295 PNSVKLQMENAILAEPWDGK-ADDALLRYIPFLEYLVTQPINDVRPIL 341
>sp|Q6BVY9|TIM50_DEBHA Mitochondrial import inner membrane translocase subunit TIM50
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=TIM50 PE=3 SV=1
Length = 471
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 98/189 (51%), Gaps = 28/189 (14%)
Query: 121 LPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVF 180
LP AP + R P+TLV+ LD+ L+HS +D +K +T
Sbjct: 178 LPPPAPEAYRR----------PLTLVVTLDDLLIHSDWD------------TKHGWRTG- 214
Query: 181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE 240
+RP L FL ++ +++VIF + +Y+ + LDP + ++R++C + DG+
Sbjct: 215 --KRPGLDYFLGYLSQYYEIVIFGSNYQMYSENTVGKLDPFHAYVSYALFREACRYKDGK 272
Query: 241 YLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVG- 299
+KDL++L RDL + ++D + +Q DN IP++ W G D L+ L+ FLE L
Sbjct: 273 LVKDLSLLNRDLGKTVLIDVEEDSWSMQPDNAIPMKPWDGS-YDDTLVKLIPFLEYLATQ 331
Query: 300 -ADDVRPII 307
DVRPI+
Sbjct: 332 PVKDVRPIL 340
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,157,308
Number of Sequences: 539616
Number of extensions: 5383377
Number of successful extensions: 9838
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 9678
Number of HSP's gapped (non-prelim): 101
length of query: 315
length of database: 191,569,459
effective HSP length: 117
effective length of query: 198
effective length of database: 128,434,387
effective search space: 25430008626
effective search space used: 25430008626
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)